Citrus Sinensis ID: 026214

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-
Protein Sequence
MRSILRKFKNKEDRENAVNINSKTENMMRNGASVLKELIASSNGKYNPYRIFSAQELKLATNNYDQKNVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRENKA
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHcccccccEEEEcHHHHHHHHcccccccccccccccEEEEEEEcccEEEEEEccccccccHHHHHHHHHHHHHccccccccEEcEEccccEEEEEEEEcccccHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccEEEEEEEcccccEEEEEcccc
Secondary Structure Prediction (SSPRO)
ccEEEEEEEccccccccccccccccccccccccccHHcccccccccccccEEcHHHHHHHHccccHHcccccccccEEEEEEccccEEEEEEEcccccccHHHHHHHHHHHHHHHcHcHHHEEEEEcccccEEEEEEEcccccHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHcccccEEEEccHHHHEEEcccccccHcHcccHEEcccccccEEEEEEEccccccccccccc
Coil and Loop (DISEMBL)
MRSILRKfknkedrenAVNINSKTENMMRNGASVLKELIAssngkynpyriFSAQELKLatnnydqknvitedwgcilykGFWQERLISVMRFResnrdghgsciNNIVYAAQMSHDHILKLIGccletpipilafesveygnlrdrilsasqpqteplLMKHRLKIAMDIAHALAYLhfgfprpivyrdfktAHILFNEENVAKMFDFslsisipeggtsgakclkserteICCVRENKA
Flexible Loop (DISEMBL)
mrsilrkfknkedrenavninsktenmmrNGASVLKELIASSNGKYNPYRIFSAQELKLATNNYDQKNVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPeggtsgakclkserteiccvrenka
Low Complexity Region (SEG)
MRSILRKFKNKEDRENAVNINSKTENMMRNGASVLKELIASSNGKYNPYRIFSAQELKLATNNYDQKNVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRENKA
Disordered region (IsUnstruct)
**********************************LKELIASSNGKYNPYRIFSAQELKLATNNYDQKNVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSA*****EPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCV*****
Disordered Region (DISOPRED)
**************************************************IFSAQELKLATNNYDQKNVITEDWGCILYKGFWQERLISVMRFRES**DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSERTE*********
Disordered Region (DISEMBL)
MRSILRKFKNKEDRENAVNINSKTENMMRNGASVLKELIASSNGKYNPYRIFSAQELKLATNNYDQKNVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRENKA
Disordered Region (DISPRO)
MRSILRKFKNK***********************************NPYRIFSAQELKLATNNYDQKNVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVR****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MRSILRKFKNKEDRENAVNINSKTENMMRNGASVLKELIASSNGKYNPYRIFSAQELKLATNNYDQKNVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRENKA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	241	2.2.26 [Sep-21-2011]
Q8GXQ3	642	Wall-associated receptor	no	no	0.775	0.291	0.382	1e-30
Q7X8C5	748	Wall-associated receptor	no	no	0.767	0.247	0.398	1e-30
Q9S9M5	730	Wall-associated receptor	no	no	0.809	0.267	0.368	2e-29
Q9LN59	788	Putative wall-associated	no	no	0.767	0.234	0.367	9e-29
Q9S9M1	731	Wall-associated receptor	no	no	0.767	0.253	0.380	1e-28
Q8RY17	751	Wall-associated receptor	no	no	0.767	0.246	0.372	5e-28
O64798	389	Inactive serine/threonine	no	no	0.784	0.485	0.389	7e-28
Q9S9M2	761	Wall-associated receptor	no	no	0.846	0.268	0.353	7e-28
Q9LMT9	764	Putative wall-associated	no	no	0.800	0.252	0.341	4e-27
Q9M092	786	Wall-associated receptor	no	no	0.767	0.235	0.358	5e-27

>sp|Q8GXQ3|WAKLF_ARATH Wall-associated receptor kinase-like 6 OS=Arabidopsis thaliana GN=WAKL6 PE=2 SV=2

 Score =  133 bits (335), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 72/188 (38%), Positives = 114/188 (60%), Gaps = 1/188 (0%)

Query: 29  RNGASVLKELIASSNGKYNPYRIFSAQELKLATNNYDQKNVITEDWGCILYKGFWQE-RL 87
           RNG  +LK+ + + NG  +  RIFS++ELK AT+N+    V+ +     +YKG   E R+
Sbjct: 397 RNGGLLLKQQLITKNGNVDMSRIFSSKELKKATDNFSMNRVLGQGGQGTVYKGMLAEGRI 456

Query: 88  ISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDR 147
           ++V R +          IN +V  +Q++H +I+KL+GCCLET +P+L +E +  G+L  R
Sbjct: 457 VAVKRSKVVGEGKMEEFINEVVLLSQINHRNIVKLLGCCLETEVPVLVYEYIPNGDLFKR 516

Query: 148 ILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMF 207
           +   S+     +  + RL+IA++IA AL+Y+H     PI +RD KT +IL +E+  AK+ 
Sbjct: 517 LHEKSESNDYTMTWEVRLRIAIEIAGALSYMHSAASIPIYHRDIKTTNILLDEKYRAKVS 576

Query: 208 DFSLSISI 215
           DF  S SI
Sbjct: 577 DFGTSRSI 584

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: -

>sp|Q7X8C5|WAKLB_ARATH Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1

 Score =  133 bits (334), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 75/188 (39%), Positives = 114/188 (60%), Gaps = 3/188 (1%)

Query: 29  RNGASVLKELIASSNGKYNPYRIFSAQELKLATNNYDQKNVITEDWGCILYKGFWQE-RL 87
           RNG  +LK+ +A   G     RIFS+ EL+ AT+N+++  V+ +     +YKG   + R+
Sbjct: 381 RNGGMLLKQQLARKEGNVEMSRIFSSHELEKATDNFNKNRVLGQGGQGTVYKGMLVDGRI 440

Query: 88  ISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDR 147
           ++V R +  + D     IN +V  AQ++H +I+KL+GCCLET +P+L +E V  G+L  R
Sbjct: 441 VAVKRSKAVDEDRVEEFINEVVVLAQINHRNIVKLLGCCLETEVPVLVYEFVPNGDLCKR 500

Query: 148 ILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMF 207
           +   S   T  +  + RL IA++IA AL+YLH     PI +RD KT +IL +E N AK+ 
Sbjct: 501 LHDESDDYT--MTWEVRLHIAIEIAGALSYLHSAASFPIYHRDIKTTNILLDERNRAKVS 558

Query: 208 DFSLSISI 215
           DF  S S+
Sbjct: 559 DFGTSRSV 566

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9S9M5|WAKLA_ARATH Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana GN=WAKL1 PE=1 SV=1

 Score =  129 bits (324), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 73/198 (36%), Positives = 117/198 (59%), Gaps = 3/198 (1%)

Query: 19  NINSKTENMMRNGASVLKELIASSNGKYNPYRIFSAQELKLATNNYDQKNVITEDWGCIL 78
           NIN   +   RNG  +LK+ + + +G     +IFS++EL+ AT+N+    V+ +     +
Sbjct: 384 NINRSKKFFKRNGGLLLKQQLTTKDGNVEMSKIFSSKELRKATDNFSIDRVLGQGGQGTV 443

Query: 79  YKGFWQE-RLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFE 137
           YKG   +  +++V R +  + D     IN IV  +Q++H +I+KL+GCCLET +PIL +E
Sbjct: 444 YKGMLVDGSIVAVKRSKVVDEDKMEEFINEIVLLSQINHRNIVKLLGCCLETEVPILVYE 503

Query: 138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHIL 197
            +  G+L  R+   S   T  +  + RL+IA++IA AL Y+H     PI +RD KT +IL
Sbjct: 504 YIPNGDLFKRLHDESDDYT--MTWEVRLRIAIEIAGALTYMHSAASFPIFHRDIKTTNIL 561

Query: 198 FNEENVAKMFDFSLSISI 215
            +E+  AK+ DF  S S+
Sbjct: 562 LDEKYRAKVSDFGTSRSV 579

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9LN59|WAKLK_ARATH Putative wall-associated receptor kinase-like 11 OS=Arabidopsis thaliana GN=WAKL11 PE=3 SV=2

 Score =  127 bits (318), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 69/188 (36%), Positives = 112/188 (59%), Gaps = 3/188 (1%)

Query: 29  RNGASVLKELIASSNGKYNPYRIFSAQELKLATNNYDQKNVITEDWGCILYKGFWQE-RL 87
           RNG  +L++ + ++ G     RIFS++EL+ AT+N+ +  ++ +     +YKG   + R 
Sbjct: 416 RNGGLLLQQQLNTNKGNVEKTRIFSSRELEKATDNFSESRILGQGGQGTVYKGMLVDGRT 475

Query: 88  ISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDR 147
           ++V + +  + D     IN +V  +Q++H H++KL+GCCLET +P L +E +  GNL   
Sbjct: 476 VAVKKSKVVDEDKLEEFINEVVILSQINHRHVVKLLGCCLETEVPTLVYEFIPNGNLFQH 535

Query: 148 ILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMF 207
           I   S   T+   M  RL+IA+DIA AL+YLH     PI +RD K+ +IL +E+   K+ 
Sbjct: 536 IHEESDDYTKTWGM--RLRIAVDIAGALSYLHSAASSPIYHRDIKSTNILLDEKYRTKVS 593

Query: 208 DFSLSISI 215
           DF  S S+
Sbjct: 594 DFGTSRSV 601

Putative serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9S9M1|WAKLE_ARATH Wall-associated receptor kinase-like 5 OS=Arabidopsis thaliana GN=WAKL5 PE=2 SV=2

 Score =  127 bits (318), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 72/189 (38%), Positives = 116/189 (61%), Gaps = 4/189 (2%)

Query: 29  RNGASVLKELIASSN-GKYNPYRIFSAQELKLATNNYDQKNVITEDWGCILYKGFWQE-R 86
           RNG  +LK+ + ++N G  +  R+FS++ELK AT+N+  K V+ +     +YKG   + +
Sbjct: 396 RNGGLLLKQQLTTTNDGNVDMSRLFSSEELKKATDNFSVKRVLGKGSQGTVYKGMMVDGK 455

Query: 87  LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRD 146
           +I+V R +  + D     IN I+  +Q++H +I+KLIGCCLET +PIL +E +  G++  
Sbjct: 456 IIAVKRSKVVDEDKLEKFINEIILLSQINHRNIVKLIGCCLETEVPILVYEYIPNGDMFK 515

Query: 147 RILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKM 206
           R+   S      +  + RL+IA++IA AL Y+H     PI +RD KT +IL +E+  AK+
Sbjct: 516 RLHDESDDYA--MTWEVRLRIAIEIAGALTYMHSAASFPIYHRDIKTTNILLDEKYGAKV 573

Query: 207 FDFSLSISI 215
            DF  S S+
Sbjct: 574 SDFGTSRSV 582

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component. May be involved in plant's response to pathogen infection.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q8RY17|WAKLI_ARATH Wall-associated receptor kinase-like 22 OS=Arabidopsis thaliana GN=WAKL22 PE=2 SV=1

 Score =  124 bits (312), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 70/188 (37%), Positives = 113/188 (60%), Gaps = 3/188 (1%)

Query: 29  RNGASVLKELIASSNGKYNPYRIFSAQELKLATNNYDQKNVITEDWGCILYKGFWQE-RL 87
           RNG  +LK+ + +  G     +IFS++EL+ AT+N++   V+ +     +YKG   + R+
Sbjct: 386 RNGGLLLKQQLTTRGGNVQSSKIFSSKELEKATDNFNMNRVLGQGGQGTVYKGMLVDGRI 445

Query: 88  ISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDR 147
           ++V R +  + D     IN +   +Q++H +I+KL+GCCLET +PIL +E +  G+L  R
Sbjct: 446 VAVKRSKVLDEDKVEEFINEVGVLSQINHRNIVKLMGCCLETEVPILVYEHIPNGDLFKR 505

Query: 148 ILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMF 207
           +   S   T  +    RL+I+++IA ALAYLH     P+ +RD KT +IL +E+  AK+ 
Sbjct: 506 LHHDSDDYT--MTWDVRLRISVEIAGALAYLHSAASTPVYHRDVKTTNILLDEKYRAKVS 563

Query: 208 DFSLSISI 215
           DF  S SI
Sbjct: 564 DFGTSRSI 571

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component. Required during plant's response to pathogen infection.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|O64798|Y1747_ARATH Inactive serine/threonine-protein kinase At1g67470 OS=Arabidopsis thaliana GN=At1g67470 PE=2 SV=1

 Score =  124 bits (310), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 79/203 (38%), Positives = 113/203 (55%), Gaps = 14/203 (6%)

Query: 23  KTENMMRNGASVLKELIASSNGKYNPYRIFSAQELKLATNNYDQKNVITE---DWGCILY 79
           K+E     GA +LK+LI   +GK NP + FSA E++ ATNN+   N+++E   D+    Y
Sbjct: 11  KSEIASERGAKLLKDLIECCDGKSNPIKFFSADEIRKATNNFGVSNLVSELSHDFDYKWY 70

Query: 80  KGFWQER-LISVMRFRESNRDGHGSCINNIVYAAQMS-HDHILKLIGCCLETPIPILAFE 137
            G  +   +I V +    +     +   +I  ++ +S H + LKLIG CLE   P++ + 
Sbjct: 71  SGKNENHDMILVRKAFSQSVYYKDTFFRDIAVSSMVSGHKNFLKLIGYCLEFEEPVMVYH 130

Query: 138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHIL 197
            V+       + S+ QP       K R+KIA DIA ALAYLH  FPRP VYR     +IL
Sbjct: 131 GVKKHY---HLESSEQP------WKRRMKIAEDIATALAYLHTAFPRPFVYRCLSLTNIL 181

Query: 198 FNEENVAKMFDFSLSISIPEGGT 220
            +E+ VAK+ DFS  +SIPEG T
Sbjct: 182 LDEDGVAKLMDFSFCVSIPEGET 204

Arabidopsis thaliana (taxid: 3702)

>sp|Q9S9M2|WAKLD_ARATH Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana GN=WAKL4 PE=2 SV=2

 Score =  124 bits (310), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 75/212 (35%), Positives = 120/212 (56%), Gaps = 8/212 (3%)

Query: 5   LRKFKNKEDRENAVNINSKTENMMRNGASVLKELIASSNGKYNPYRIFSAQELKLATNNY 64
           L KF  K+ R + + +  +     RNG  +LK+ +A   G     +IFS+ EL+ AT+N+
Sbjct: 370 LYKFIKKQRRSSRMRVFFR-----RNGGMLLKQQLARKEGNVEMSKIFSSNELEKATDNF 424

Query: 65  DQKNVITEDWGCILYKGFWQE-RLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLI 123
           +   V+ +     +YKG   + R+++V R +  + D     IN +V  AQ++H +I+KL+
Sbjct: 425 NTNRVLGQGGQGTVYKGMLVDGRIVAVKRSKAMDEDKVEEFINEVVVLAQINHRNIVKLL 484

Query: 124 GCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFP 183
           GCCLET +P+L +E V  G+L  R+          +  + RL IA++IA AL+YLH    
Sbjct: 485 GCCLETEVPVLVYEFVPNGDLCKRLRDECDDYI--MTWEVRLHIAIEIAGALSYLHSAAS 542

Query: 184 RPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
            PI +RD KT +IL +E+   K+ DF  S S+
Sbjct: 543 FPIYHRDIKTTNILLDEKYQVKVSDFGTSRSV 574

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component. Plays a role in plant mineral nutrients response.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9LMT9|WAKLL_ARATH Putative wall-associated receptor kinase-like 13 OS=Arabidopsis thaliana GN=WAKL13 PE=2 SV=1

 Score =  121 bits (304), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 67/196 (34%), Positives = 114/196 (58%), Gaps = 3/196 (1%)

Query: 21  NSKTENMMRNGASVLKELIASSNGKYNPYRIFSAQELKLATNNYDQKNVITEDWGCILYK 80
           N K +   RNG  +L++ + ++ G+    ++FS++EL+ AT+N++   VI +     +YK
Sbjct: 411 NRKRKFFKRNGGLLLQQQLNTTQGRVEKTKLFSSRELEKATDNFNDNRVIGQGGQGTVYK 470

Query: 81  GFWQE-RLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESV 139
           G   + R ++V +    + D     IN ++  +Q++H H++KL+GCCLET +PIL +E +
Sbjct: 471 GMLVDGRSVAVKKSNVVDEDKLQEFINEVIILSQINHRHVVKLLGCCLETEVPILVYEFI 530

Query: 140 EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFN 199
             GNL   +       T   L   R++IA+DI+ A +YLH     PI +RD K+ +IL +
Sbjct: 531 PNGNLFQHLHEEFDDYTA--LWGVRMRIAVDISGAFSYLHTAACSPIYHRDIKSTNILLD 588

Query: 200 EENVAKMFDFSLSISI 215
           E+  AK+ DF  S S+
Sbjct: 589 EKYRAKVSDFGTSRSV 604

Putative serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9M092|WAKLM_ARATH Wall-associated receptor kinase-like 17 OS=Arabidopsis thaliana GN=WAKL17 PE=3 SV=2

 Score =  121 bits (303), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 109/187 (58%), Gaps = 2/187 (1%)

Query: 30  NGASVLKELIASSNGKYNPYRIFSAQELKLATNNYDQKNVITEDWGCILYKGFWQE-RLI 88
           NG  +L++ + +  G     RIF+++EL+ AT N+ +  V+       +YKG   + R +
Sbjct: 410 NGGLLLQQELNTRQGVVEKARIFTSKELEKATENFSENRVLGHGGQGTVYKGMLVDGRTV 469

Query: 89  SVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRI 148
           +V + +  + D     IN +V  +Q++H H++KL+GCCLET +PIL +E +  GNL   I
Sbjct: 470 AVKKSKVIDEDKLQEFINEVVILSQINHRHVVKLLGCCLETEVPILVYEFIINGNLFKHI 529

Query: 149 LSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFD 208
               +     ++   RL+IA+DIA AL+YLH     PI +RD K+ +IL +E+  AK+ D
Sbjct: 530 -HEEEADDYTMIWGMRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNILLDEKYRAKVAD 588

Query: 209 FSLSISI 215
           F  S S+
Sbjct: 589 FGTSRSV 595

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	241
255582635	331	receptor protein kinase, putative [Ricin	0.788	0.574	0.505	9e-49
255542658	356	serine-threonine protein kinase, plant-t	0.834	0.564	0.477	2e-43
224123144	344	predicted protein [Populus trichocarpa]	0.850	0.595	0.448	9e-43
255542676	247	serine-threonine protein kinase, plant-t	0.780	0.761	0.492	1e-42
255542662	330	serine-threonine protein kinase, plant-t	0.796	0.581	0.482	3e-42
255542656	331	serine-threonine protein kinase, plant-t	0.796	0.580	0.480	6e-41
359495254	331	PREDICTED: wall-associated receptor kina	0.784	0.570	0.477	6e-38
297740943	321	unnamed protein product [Vitis vinifera]	0.784	0.588	0.477	6e-38
224083492	666	predicted protein [Populus trichocarpa]	0.792	0.286	0.401	3e-32
4678274	352	putative protein [Arabidopsis thaliana]	0.788	0.539	0.411	1e-31

>gi|255582635|ref|XP_002532098.1| receptor protein kinase, putative [Ricinus communis] gi|223528232|gb|EEF30288.1| receptor protein kinase, putative [Ricinus communis]

 Score =  199 bits (506), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 97/192 (50%), Positives = 139/192 (72%), Gaps = 2/192 (1%)

Query: 28  MRNGASVLKELIASSNGKYNPYRIFSAQELKLATNNYDQKNVITEDWGCILYKGFWQERL 87
           + NG  +L++LIAS +G+ NP RIFSA EL  AT++YD + +IT+D G  LY G   ER 
Sbjct: 13  LMNGRMLLEKLIASCDGRCNPIRIFSADELSRATDDYDPRKIITQDSGYKLYNGLLHERT 72

Query: 88  ISVMRFRESNRDGHGSCINNIVYAAQMS-HDHILKLIGCCLETPIPILAFESVEYGNLRD 146
           ISV +F++ + + +  C N+I++A QMS H + LKL+GCCLET IP+L FE +EYG L  
Sbjct: 73  ISVKKFKDKS-EQYKYCYNDIMFATQMSKHKNFLKLLGCCLETQIPVLVFEPIEYGTLAG 131

Query: 147 RILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKM 206
           R+   ++   +PLL +HRLKIA++IA+A++YLH  F RPIV+R+ K  +I  +E +VAK+
Sbjct: 132 RLYGPNKTLYQPLLWRHRLKIAVEIANAVSYLHTAFSRPIVFRNIKPLNIFLDECHVAKL 191

Query: 207 FDFSLSISIPEG 218
            DFSL++SIPEG
Sbjct: 192 SDFSLAVSIPEG 203

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542658|ref|XP_002512392.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223548353|gb|EEF49844.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis]

 Score =  181 bits (460), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 97/203 (47%), Positives = 134/203 (66%), Gaps = 2/203 (0%)

Query: 19  NINSKTENMMRNGASVLKELIASSNGKYNPYRIFSAQELKLATNNYDQKNVITEDWGCIL 78
           N++     +MRNG  +L++ IA +NG+ NP R FS  EL+ ATN+Y Q NVI E     L
Sbjct: 8   NMDENETALMRNGGILLEKSIAFNNGRGNPIRWFSVDELQTATNSYSQNNVIYEGGWHTL 67

Query: 79  YKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQMS-HDHILKLIGCCLETPIPILAFE 137
           YKGF ++R + V R+R +N       IN+IV+A++MS H ++LKL+GCCLE+ IPIL FE
Sbjct: 68  YKGFLRDRPVIVKRYR-NNIHERVCPINDIVFASEMSRHKNVLKLLGCCLESEIPILVFE 126

Query: 138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHIL 197
             E G L+D I         PLL K RLKIA+D A+ +AYLH   PRP+V+RD   ++I 
Sbjct: 127 YAEKGKLQDYIYKTDSASFRPLLWKSRLKIAVDAANVIAYLHTACPRPVVHRDITLSNIW 186

Query: 198 FNEENVAKMFDFSLSISIPEGGT 220
            +E+ VAK+ DF++S+SI EG T
Sbjct: 187 LDEDYVAKVTDFTVSMSILEGET 209

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224123144|ref|XP_002319005.1| predicted protein [Populus trichocarpa] gi|222857381|gb|EEE94928.1| predicted protein [Populus trichocarpa]

 Score =  179 bits (454), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 95/212 (44%), Positives = 144/212 (67%), Gaps = 7/212 (3%)

Query: 8   FKNKEDRENAVNINSKTENMMRNGASVLKELIASSNGKYNPYRIFSAQELKLATNNYDQK 67
           ++ K+D++    +N +T   ++NG+ +L++L+   +GK N  R FSA ELK ATNNYD +
Sbjct: 5   WETKKDKK----VNKETA-FIKNGSKLLEKLVDICDGKCNSIRSFSATELKKATNNYDPQ 59

Query: 68  NVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQMS-HDHILKLIGCC 126
            ++T D G  LYKGF Q R +SV +F++ + + +  C N+IVYA++MS H   +KL+GCC
Sbjct: 60  KILTGDSGYKLYKGFLQGRPVSVKKFKDDD-EQYEYCFNDIVYASKMSVHKSFMKLLGCC 118

Query: 127 LETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPI 186
           LE  IPIL FE V    L D +  + + + +PLL   R KIAMD+A+A+A+LH  F +PI
Sbjct: 119 LEARIPILVFEYVGDWTLSDFLWGSEEARCQPLLWIPRSKIAMDMANAVAFLHAAFSKPI 178

Query: 187 VYRDFKTAHILFNEENVAKMFDFSLSISIPEG 218
           V+R+ K  +IL ++ + AK+ DFS+SISIP+G
Sbjct: 179 VFRNIKPLNILLDDNHEAKLSDFSISISIPKG 210

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542676|ref|XP_002512401.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223548362|gb|EEF49853.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis]

 Score =  178 bits (452), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 96/195 (49%), Positives = 133/195 (68%), Gaps = 7/195 (3%)

Query: 27  MMRNGASVLKELIASSNGKYNPYRIFSAQELKLATNNYDQKNVITEDWGCILYKGFWQER 86
           +MRNG  +L++ IA +NG+ NP R FS +EL+ ATN+Y Q NVI E      YKGF +ER
Sbjct: 8   LMRNGGILLEKSIAFNNGRGNPIRCFSVEELQTATNSYSQNNVIYEGGWHTHYKGFLRER 67

Query: 87  LISVMRFRESNRDGHGSCINNIVYAAQMS-HDHILKLIGCCLETPIPILAFESVEYGNLR 145
            + V R+R +N       IN+IV+A++MS H ++LKL+GCCLE+ IPIL FE  E GNL 
Sbjct: 68  PVIVKRYR-TNIHERVCPINDIVFASEMSRHKNVLKLLGCCLESEIPILVFEYAEKGNLH 126

Query: 146 DRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAK 205
           D I      +T+    + RLKIA+D A+ +AYLH  FPRP+V+R    +++  +E++VAK
Sbjct: 127 DYIY-----KTDSASFRRRLKIAVDAANVIAYLHTAFPRPVVHRHITLSNVWLDEDSVAK 181

Query: 206 MFDFSLSISIPEGGT 220
           + DFSLS+SIPEG T
Sbjct: 182 VTDFSLSMSIPEGET 196

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542662|ref|XP_002512394.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223548355|gb|EEF49846.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis]

 Score =  177 bits (450), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 94/195 (48%), Positives = 130/195 (66%), Gaps = 3/195 (1%)

Query: 25  ENMMRNGASVLKELIASSNGKYNPYRIFSAQELKLATNNYDQKNVITEDWGCILYKGFWQ 84
           E  + NG+ +L++ +A  NG+ NP R FS++EL+ AT NY++K V+  D    LYKGF Q
Sbjct: 5   EAFLINGSKLLEKSVAFCNGRCNPIRNFSSEELEKATRNYNEKQVLKLDGYFELYKGFLQ 64

Query: 85  ERLISVMRFRESNRDGHGSCINNIVYAAQMS-HDHILKLIGCCLETPIPILAFESVEYGN 143
           +R + V +F E   +     IN IVYA+ MS H + +KL+GCCLETP PIL FES +   
Sbjct: 65  DRPVIVKKFLEVGVEQLA--INEIVYASAMSVHINSIKLLGCCLETPSPILVFESAKEKT 122

Query: 144 LRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENV 203
           L DRI+  +    EP+  K RLKI  DIA+ + Y+H  FPRPIV+R+ K ++IL +E+ V
Sbjct: 123 LADRIIDRNDDHFEPVKWKLRLKIVADIANVVVYIHTAFPRPIVHRNIKASNILLDEDYV 182

Query: 204 AKMFDFSLSISIPEG 218
           AK+ DFSL +SIPEG
Sbjct: 183 AKLSDFSLCVSIPEG 197

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542656|ref|XP_002512391.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223548352|gb|EEF49843.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis]

 Score =  173 bits (438), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 97/202 (48%), Positives = 131/202 (64%), Gaps = 10/202 (4%)

Query: 21  NSKTEN-MMRNGASVLKELIASSNGKYNPYRIFSAQELKLATNNYDQKNVITEDWGCILY 79
           +SK E  +MRNG S+L++ +A +NG+ NP R FS +EL+ ATN+Y Q NV   D  C LY
Sbjct: 7   DSKYEKALMRNGRSLLEKSVALNNGRGNPVRCFSVKELQNATNSYSQHNVFYIDGTCRLY 66

Query: 80  KGFWQERLISVMRFRESNRDGHGSCINNIVYAAQMS-HDHILKLIGCCLETPIPILAFES 138
           KG  ++R + V ++    +      +++IV A++MS H ++LKL+GCCLE+ IPI  FE 
Sbjct: 67  KGLIRDRPVIVKKY--DYKHPSEDPVSDIVIASEMSVHRNVLKLLGCCLESEIPIPVFEY 124

Query: 139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILF 198
            E G L D +      Q   LL K RLKIA+D+A  +AYLH  FPRPIV+RD   A IL 
Sbjct: 125 AEKGTLEDYV------QKTALLWKDRLKIAVDVASVIAYLHTAFPRPIVHRDISLASILL 178

Query: 199 NEENVAKMFDFSLSISIPEGGT 220
           +E+  AK+  FSLSISIPEG T
Sbjct: 179 DEDCAAKVTGFSLSISIPEGET 200

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359495254|ref|XP_002271826.2| PREDICTED: wall-associated receptor kinase-like 8-like [Vitis vinifera]

 Score =  163 bits (412), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 95/199 (47%), Positives = 127/199 (63%), Gaps = 10/199 (5%)

Query: 23  KTENMMRNGASVLKELIASSNGKY-NPYRIFSAQELKLATNNYDQKNVITEDWG-CILYK 80
           K E+M++NG+ +LKE I+  NGKY NP R F  +EL+ AT++Y+   +   D G CI YK
Sbjct: 10  KKESMLKNGSLLLKERISYFNGKYFNPIRSFCMKELQNATDDYNTGLIFDHDVGNCIWYK 69

Query: 81  GFWQERLISVMRFRESNRDGHGSCINNIVYAAQMS-HDHILKLIGCCLETPIPILAFESV 139
           G  + R ISV   R +  +G    IN IV A+QMS H + LKL+GCCLET IPIL +E  
Sbjct: 70  GSLEGRTISV---RTNFYEGVEMAINEIVIASQMSAHKNALKLLGCCLETRIPILVYEFP 126

Query: 140 EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFN 199
             G+L DRI S   P    L  K RL+IA DIA+ +AYLH  FPR I++ D K +    +
Sbjct: 127 SGGSLIDRIFSPPNP----LSWKSRLRIAYDIANVIAYLHIAFPRSIIHTDIKPSSFFLD 182

Query: 200 EENVAKMFDFSLSISIPEG 218
           ++  AK+ DFSLSI++PEG
Sbjct: 183 QDCAAKLSDFSLSITLPEG 201

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297740943|emb|CBI31255.3| unnamed protein product [Vitis vinifera]

 Score =  163 bits (412), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 95/199 (47%), Positives = 127/199 (63%), Gaps = 10/199 (5%)

Query: 23  KTENMMRNGASVLKELIASSNGKY-NPYRIFSAQELKLATNNYDQKNVITEDWG-CILYK 80
           K E+M++NG+ +LKE I+  NGKY NP R F  +EL+ AT++Y+   +   D G CI YK
Sbjct: 2   KKESMLKNGSLLLKERISYFNGKYFNPIRSFCMKELQNATDDYNTGLIFDHDVGNCIWYK 61

Query: 81  GFWQERLISVMRFRESNRDGHGSCINNIVYAAQMS-HDHILKLIGCCLETPIPILAFESV 139
           G  + R ISV   R +  +G    IN IV A+QMS H + LKL+GCCLET IPIL +E  
Sbjct: 62  GSLEGRTISV---RTNFYEGVEMAINEIVIASQMSAHKNALKLLGCCLETRIPILVYEFP 118

Query: 140 EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFN 199
             G+L DRI S   P    L  K RL+IA DIA+ +AYLH  FPR I++ D K +    +
Sbjct: 119 SGGSLIDRIFSPPNP----LSWKSRLRIAYDIANVIAYLHIAFPRSIIHTDIKPSSFFLD 174

Query: 200 EENVAKMFDFSLSISIPEG 218
           ++  AK+ DFSLSI++PEG
Sbjct: 175 QDCAAKLSDFSLSITLPEG 193

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224083492|ref|XP_002307049.1| predicted protein [Populus trichocarpa] gi|222856498|gb|EEE94045.1| predicted protein [Populus trichocarpa]

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 79/197 (40%), Positives = 122/197 (61%), Gaps = 6/197 (3%)

Query: 27  MMRNGASVLKELIASSNGKYNPYRIFSAQELKLATNNYDQKNVITEDWGCILYKGFWQER 86
            + NG+ + ++LI+SSNG+Y P+  FS +EL+ ATNNY     ++ +     YKG    R
Sbjct: 9   FITNGSLLQEKLISSSNGRYYPFHNFSIEELEKATNNYAPHCFLSYNLLGTWYKGSLDGR 68

Query: 87  LISVMRFRESNRDGH-----GSCINNIVYAAQMSHD-HILKLIGCCLETPIPILAFESVE 140
           ++S+   R  N            +N++  AAQ+S   + L+LIGCCLETP+P+L +ESV+
Sbjct: 69  VLSICIPRYPNVQASRNQIINEIVNDVAIAAQLSRQRNFLRLIGCCLETPVPLLVYESVK 128

Query: 141 YGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNE 200
            GN+ ++I    +  ++P+  K RLKIA +IAHA++YLH  F RPIV+R     +I  ++
Sbjct: 129 RGNVSEQIHVTGEFHSQPMTWKCRLKIAREIAHAVSYLHTAFSRPIVHRGINPLNIFLDD 188

Query: 201 ENVAKMFDFSLSISIPE 217
            NVAK+ +FS S+ I E
Sbjct: 189 YNVAKLSNFSQSLYICE 205

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|4678274|emb|CAB41182.1| putative protein [Arabidopsis thaliana]

 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 81/197 (41%), Positives = 113/197 (57%), Gaps = 7/197 (3%)

Query: 27  MMRNGASVLKELIASSNGKYNPYRIFSAQELKLATNNYDQKNVITEDWGCILYKGFWQER 86
            + NG+  LKELI   NGK  P R F++ +++ AT N+D    + E+   I YKG  ++R
Sbjct: 27  FLENGSIFLKELIVDCNGKSIPIRSFTSSQIRKATKNFDLSCFVAEEGFYIWYKGVIEDR 86

Query: 87  LISVMRFRESNRDGH--GSCINNIVYAAQMS-HDHILKLIGCCLETPIPILAFESVEYG- 142
              + RF E     +       +IV +A+MS H++ LKL+GCCLE P P+L FE  E+G 
Sbjct: 87  SYMIKRFSEYKVTDYRVSEVYKDIVLSARMSNHNNFLKLLGCCLEFPFPVLVFEFAEHGV 146

Query: 143 -NLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEE 201
            N R  I    +    PL +  RLKI  +IA+ALAYLH  FP+ I+YRD K  H+  +  
Sbjct: 147 LNYRGGITVNGEESLLPLSL--RLKIGKEIANALAYLHMAFPKIIIYRDVKPLHVFLDNN 204

Query: 202 NVAKMFDFSLSISIPEG 218
             AK+ D S SIS+ EG
Sbjct: 205 WTAKLSDLSFSISLEEG 221

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	241
TAIR|locus:2076596	340	AT3G57700 [Arabidopsis thalian	0.917	0.65	0.379	5.8e-34
TAIR|locus:2076671	355	AT3G57730 [Arabidopsis thalian	0.896	0.608	0.384	2.5e-33
TAIR|locus:2076586	351	AT3G57710 [Arabidopsis thalian	0.775	0.532	0.397	1.3e-31
TAIR|locus:2076646	334	AT3G57750 [Arabidopsis thalian	0.771	0.556	0.407	2.6e-31
TAIR|locus:2079959	351	AT3G52530 [Arabidopsis thalian	0.771	0.529	0.411	2.3e-30
TAIR|locus:2076681	359	AT3G57720 [Arabidopsis thalian	0.896	0.601	0.353	3.8e-30
TAIR|locus:2200562	748	WAKL2 "wall associated kinase-	0.767	0.247	0.398	1.3e-29
TAIR|locus:2200527	642	WAKL6 "wall associated kinase-	0.775	0.291	0.382	1.3e-29
TAIR|locus:2200375	396	AT1G65190 [Arabidopsis thalian	0.771	0.469	0.397	1.6e-29
TAIR|locus:2076616	269	AT3G57770 [Arabidopsis thalian	0.738	0.661	0.420	3.4e-29

TAIR|locus:2076596 AT3G57700 [Arabidopsis thaliana (taxid:3702)]

 Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
 Identities = 88/232 (37%), Positives = 134/232 (57%)

Query:     4 ILRKFKNKEDRENAVNINSKTENMMRNGASVLKELIASSNGKYNPYRIFSAQELKLATNN 63
             +LR F+ K+ ++    IN     + +NG+ +L+ELIA+S G YNP R FS+ ++  ATN+
Sbjct:     1 MLRLFRKKKKQKKEEEIN-----LQKNGSLLLEELIATSGGIYNPIRTFSSDQILQATNH 55

Query:    64 YDQKNVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQMS-HDHILKL 122
             +D   VI+ED   + YKG  + R + + +F++ +     +   +I  ++ MS H ++LKL
Sbjct:    56 FDWNYVISED-RFVWYKGMIENRPVLIKKFQDCSVFDADNFYRDIAVSSLMSSHKNVLKL 114

Query:   123 IGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGF 182
             +GCCLE P P+L  E  E+G L    +   +          RL+IA +IA A+AYLH  F
Sbjct:   115 LGCCLEFPRPVLVCEYPEHGALN--CIRCGKEGVRSFPWNVRLRIAKEIADAVAYLHTEF 172

Query:   183 PRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG--GTSGAKCLKSERTE 232
             PR I++RD K A+I  +E   AK+  FSLSI +PEG  G +   C  S   E
Sbjct:   173 PRTIIHRDLKLANIFLDENWSAKLSSFSLSIVLPEGETGVNDMVCRTSSYIE 224

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0000165 "MAPK cascade" evidence=RCA

GO:0009693 "ethylene biosynthetic process" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0045088 "regulation of innate immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2076671 AT3G57730 [Arabidopsis thaliana (taxid:3702)]

 Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
 Identities = 87/226 (38%), Positives = 124/226 (54%)

Query:     1 MRSILRKFKN--KEDRENAVNINSKTEN-MMRNGASVLKELIASSNGKYNPYRIFSAQEL 57
             M S+++K K   +         + K E   + NG+  LKELI   NGK  P R F++ ++
Sbjct:     1 MESMVKKLKQNLRTGSWKKKEKSMKKERWFLENGSIFLKELIVDCNGKSIPIRSFTSSQI 60

Query:    58 KLATNNYDQKNVITEDWGCILYKGFWQERLISVMRFRESNRDGH--GSCINNIVYAAQMS 115
             + AT N+D    + E+   I YKG  ++R   + RF E     +       +IV +A+MS
Sbjct:    61 RKATKNFDLSCFVAEEGFYIWYKGVIEDRSYMIKRFSEYKVTDYRVSEVYKDIVLSARMS 120

Query:   116 -HDHILKLIGCCLETPIPILAFESVEYG--NLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
              H++ LKL+GCCLE P P+L FE  E+G  N R  I    +    PL +  RLKI  +IA
Sbjct:   121 NHNNFLKLLGCCLEFPFPVLVFEFAEHGVLNYRGGITVNGEESLLPLSL--RLKIGKEIA 178

Query:   173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG 218
             +ALAYLH  FP+ I+YRD K  H+  +    AK+ D S SIS+ EG
Sbjct:   179 NALAYLHMAFPKIIIYRDVKPLHVFLDNNWTAKLSDLSFSISLEEG 224

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2076586 AT3G57710 [Arabidopsis thaliana (taxid:3702)]

 Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
 Identities = 78/196 (39%), Positives = 115/196 (58%)

Query:    30 NGASVLKELIASSNGKYNPYRIFSAQELKLATNNYDQKNVITEDWGCILYKGFWQERLIS 89
             NG+  L+EL+A  NGK  P R FS +++  ATNN+D    +++D     Y+G  ++R   
Sbjct:    26 NGSIFLRELVADCNGKSIPIRSFSPEQILKATNNFDSSCFVSQDVYYKWYRGEIEDRSYM 85

Query:    90 VMRFRESNRDG--HG--SCINNIVYAAQMS-HDHILKLIGCCLETPIPILAFESVEYG-- 142
             + RF E    G  H      N+IV +A+MS H + L+L+GCCLE P P+L FE  E+G  
Sbjct:    86 IKRFSEDEITGKRHRVKEVYNDIVLSARMSNHSNFLQLLGCCLEFPFPVLVFEFAEHGAM 145

Query:   143 NLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEEN 202
             N R  ++   +    P  +  RLKI  +IA+A+ YLH  FP+ I++RD K  H+  ++  
Sbjct:   146 NQRGGVIVNGEESLLPWSV--RLKIGKEIANAVTYLHTAFPKIIIHRDVKPMHVFLDKNW 203

Query:   203 VAKMFDFSLSISIPEG 218
              AK+ D S SIS+PEG
Sbjct:   204 TAKLSDLSFSISLPEG 219

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2076646 AT3G57750 [Arabidopsis thaliana (taxid:3702)]

 Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
 Identities = 79/194 (40%), Positives = 115/194 (59%)

Query:    28 MRNGASVLKELIASSNGKYNPYRIFSAQELKLATNNYDQKNVITEDWGCIL-YKGFWQER 86
             ++NG  +L+ELIAS +GK NP R FS+ ++  AT+N+ +  +I+  WG  + YKG  +ER
Sbjct:    13 LKNGGILLEELIASFDGKTNPIRCFSSDQILKATDNFSESRIISS-WGYFIWYKGVIEER 71

Query:    87 LISVMRFRESNRDGHGSCINNIVYAAQMS-HDHILKLIGCCLETPIPILAFESVEYGNL- 144
              +S+ ++   N         +I  ++QMS H + LKLIGCCLE  +P L  E  E+G L 
Sbjct:    72 QVSIKKWSSQNLSSFTEAYRDISVSSQMSGHKNALKLIGCCLEFDLPALVCEYTEHGPLN 131

Query:   145 RDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVA 204
             RD  LS+       L  K RLKIA +IA ++ YLH  FP  IV+R+    +I  +E   A
Sbjct:   132 RDGGLSSGVV----LPWKVRLKIAKEIASSVTYLHTAFPETIVHRNINPTNIFIDENWTA 187

Query:   205 KMFDFSLSISIPEG 218
             K+ DF   ++IPEG
Sbjct:   188 KLSDFWFCVAIPEG 201

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009693 "ethylene biosynthetic process" evidence=RCA

GO:0015824 "proline transport" evidence=RCA

TAIR|locus:2079959 AT3G52530 [Arabidopsis thaliana (taxid:3702)]

 Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
 Identities = 81/197 (41%), Positives = 119/197 (60%)

Query:    29 RNGASVLKELIASSNGKYNPYRIFSAQELKLATNNYDQKNVITEDWGCILYKGFWQERLI 88
             +NG+ + +ELIA S+GKYNP R+FS+ ++  ATNN+D  ++I +D   I YKG  +ER +
Sbjct:    17 KNGSLLHEELIACSDGKYNPIRMFSSDQILKATNNFDADHIIAKD-RFIWYKGTIEERRV 75

Query:    89 SVMRFRESNRDGHGSCIN---NIVYAAQMS-HDHILKLIGCCLETPIPILAFESVEYGNL 144
              + ++ E +     S  N   +I   + MS H ++LKL+GCC+E   P+L  E  E G L
Sbjct:    76 LIKKW-EGDYVLFSSPENVYRDIAVLSMMSSHKNVLKLLGCCVEFYKPVLVCELAEKGPL 134

Query:   145 RDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVA 204
             +   +  +     PL    RLKI  DIA+A+AYLH  FPR I+ RD +  +I  +E+  A
Sbjct:   135 KLEDMDGT-----PLPWSARLKIGKDIANAVAYLHTAFPRVIINRDVRPQNIFLDEDGTA 189

Query:   205 KMFDFSLSISIPEGGTS 221
             K+  F L ISIPEG +S
Sbjct:   190 KLSSFCLRISIPEGESS 206

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

TAIR|locus:2076681 AT3G57720 [Arabidopsis thaliana (taxid:3702)]

 Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
 Identities = 81/229 (35%), Positives = 127/229 (55%)

Query:     1 MRSILRKFKNK------EDRENAVNINSKTENMMRNGASVLKELIASSNGKYNPYRIFSA 54
             M+S+++K K        E R+       + +  + NG+  LKELIA  NGK  P R FS+
Sbjct:     1 MKSMVKKLKQSLRSGSLEKRKEKEKDIQEEKWFLDNGSIFLKELIADCNGKSIPIRNFSS 60

Query:    55 QELKLATNNYDQKNVITEDWGCILYKGFWQERLISVMRFRESNRDGH--GSCINNIVYAA 112
              ++  AT+N+     +T +   + YKG  ++R   + RF E     +      N IV +A
Sbjct:    61 DQILKATSNFGSSCFVTAEGFYVWYKGIIEDRSYMIKRFSEYKVTQYRVAEVYNEIVLSA 120

Query:   113 QMS-HDHILKLIGCCLETPIPILAFESVEYGNLRDR--ILSASQPQTEPLLMKHRLKIAM 169
             +MS H++ LKLIG CLE  +P+L FE  E+G L  R  ++   +    PL +  RLKI  
Sbjct:   121 RMSNHNNFLKLIGFCLEFSLPVLVFEYAEHGVLNHRGGVIVNGEEVILPLSL--RLKIGK 178

Query:   170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG 218
             +IA+A+ YLH  FP+ +++R  K  ++  +E    K+ DFS+SI++PEG
Sbjct:   179 EIANAVTYLHMAFPKILIHRHIKPRNVFLDENWTPKLSDFSISINLPEG 227

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2200562 WAKL2 "wall associated kinase-like 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 337 (123.7 bits), Expect = 1.3e-29, P = 1.3e-29
 Identities = 75/188 (39%), Positives = 114/188 (60%)

Query:    29 RNGASVLKELIASSNGKYNPYRIFSAQELKLATNNYDQKNVITEDWGCILYKGFWQE-RL 87
             RNG  +LK+ +A   G     RIFS+ EL+ AT+N+++  V+ +     +YKG   + R+
Sbjct:   381 RNGGMLLKQQLARKEGNVEMSRIFSSHELEKATDNFNKNRVLGQGGQGTVYKGMLVDGRI 440

Query:    88 ISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDR 147
             ++V R +  + D     IN +V  AQ++H +I+KL+GCCLET +P+L +E V  G+L  R
Sbjct:   441 VAVKRSKAVDEDRVEEFINEVVVLAQINHRNIVKLLGCCLETEVPVLVYEFVPNGDLCKR 500

Query:   148 ILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMF 207
             +   S   T  +  + RL IA++IA AL+YLH     PI +RD KT +IL +E N AK+ 
Sbjct:   501 LHDESDDYT--MTWEVRLHIAIEIAGALSYLHSAASFPIYHRDIKTTNILLDERNRAKVS 558

Query:   208 DFSLSISI 215
             DF  S S+
Sbjct:   559 DFGTSRSV 566

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0010200 "response to chitin" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2200527 WAKL6 "wall associated kinase-like 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 335 (123.0 bits), Expect = 1.3e-29, P = 1.3e-29
 Identities = 72/188 (38%), Positives = 114/188 (60%)

Query:    29 RNGASVLKELIASSNGKYNPYRIFSAQELKLATNNYDQKNVITEDWGCILYKGFWQE-RL 87
             RNG  +LK+ + + NG  +  RIFS++ELK AT+N+    V+ +     +YKG   E R+
Sbjct:   397 RNGGLLLKQQLITKNGNVDMSRIFSSKELKKATDNFSMNRVLGQGGQGTVYKGMLAEGRI 456

Query:    88 ISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDR 147
             ++V R +          IN +V  +Q++H +I+KL+GCCLET +P+L +E +  G+L  R
Sbjct:   457 VAVKRSKVVGEGKMEEFINEVVLLSQINHRNIVKLLGCCLETEVPVLVYEYIPNGDLFKR 516

Query:   148 ILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMF 207
             +   S+     +  + RL+IA++IA AL+Y+H     PI +RD KT +IL +E+  AK+ 
Sbjct:   517 LHEKSESNDYTMTWEVRLRIAIEIAGALSYMHSAASIPIYHRDIKTTNILLDEKYRAKVS 576

Query:   208 DFSLSISI 215
             DF  S SI
Sbjct:   577 DFGTSRSI 584

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2200375 AT1G65190 [Arabidopsis thaliana (taxid:3702)]

 Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
 Identities = 81/204 (39%), Positives = 117/204 (57%)

Query:    21 NSKTENMMRNGASVLKELIASSNGKYNPYRIFSAQELKLATNNYDQKNVI-TEDWGCILY 79
             N K E  +  GA +L+ELI   +GK NP + FSA E++ ATN +   N++  E++ C  Y
Sbjct:    11 NKKLE--LERGAKLLEELIECCDGKSNPIKFFSADEIRKATNIFSHSNLVHQEEFYCQWY 68

Query:    80 KGFWQERLISVMRFRESNRDGHGSCINNIVYAAQMS-HDHILKLIGCCLETPIPILAFES 138
              G  +   + ++R ++SN  G      NI  ++ +S H + +KL+GCCLE   P+  +  
Sbjct:    69 SGKNENHPMILIR-KDSNVRGGDLVCRNIAVSSMVSGHKNFMKLVGCCLELKYPVTVYHG 127

Query:   139 VE--YGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHI 196
             V+  YG      L   +   +P   K R+KIA DIA ALAYLH  FPRP+VY      +I
Sbjct:   128 VKKHYG------LEIDE---KP--WKRRMKIAEDIATALAYLHTAFPRPLVYMILSHRNI 176

Query:   197 LFNEENVAKMFDFSLSISIPEGGT 220
             L +E+ VAK+ DFS  +SIPEG T
Sbjct:   177 LLDEDGVAKLTDFSHCVSIPEGET 200

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005575 "cellular_component" evidence=ND

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2076616 AT3G57770 [Arabidopsis thaliana (taxid:3702)]

 Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
 Identities = 77/183 (42%), Positives = 105/183 (57%)

Query:    38 LIASSNGKYNPYRIFSAQELKLATNNYDQKNVITEDWGCILYKGFWQERLISVMRFR-ES 96
             LIASS GKYNP R FS+ ++  ATNN+D    I  D   + YKG  + R + +  ++ E 
Sbjct:    54 LIASSGGKYNPIRTFSSHQILEATNNFDWSYAIGVD-RFVWYKGTIENRAVLIKYYKGEP 112

Query:    97 NRDGHGSCINNIVYAAQMS-HDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQ 155
                   +   +I  ++ MS H ++LKL+GCCLE P P+L  E  E G L    +  +   
Sbjct:   113 FNFDPDNFYRDIAVSSMMSSHKNVLKLLGCCLEFPRPVLVCEYPEKGALA--YIGGAGEV 170

Query:   156 TEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
              +PL    RLKIA +IA A+ YLH  FPR I++RD K  +I  +E   AK+  FSLSI I
Sbjct:   171 IKPLAWSVRLKIAKEIADAVTYLHTEFPRTIIHRDLKLTNIFLDENWTAKLSSFSLSIPI 230

Query:   216 PEG 218
             PEG
Sbjct:   231 PEG 233

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	241
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	2e-17
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	3e-17
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	9e-17
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	4e-16
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	2e-15
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	5e-12
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	2e-10
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	3e-10
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	9e-10
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	5e-09
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	6e-09
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	1e-08
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	2e-08
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	7e-08
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	9e-08
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	2e-07
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	3e-07
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	4e-07
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	4e-07
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	5e-07
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	5e-07
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	8e-07
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	1e-06
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	1e-06
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	2e-06
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	2e-06
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	2e-06
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	4e-06
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	6e-06
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	6e-06
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	6e-06
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	6e-06
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	8e-06
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	8e-06
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	8e-06
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	9e-06
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	9e-06
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	1e-05
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	1e-05
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	1e-05
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	1e-05
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	2e-05
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	2e-05
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	2e-05
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	2e-05
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	3e-05
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	4e-05
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	5e-05
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	5e-05
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	6e-05
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	8e-05
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	1e-04
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	1e-04
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	1e-04
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	1e-04
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	2e-04
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	2e-04
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	3e-04
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	3e-04
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	5e-04
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	5e-04
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	6e-04
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	6e-04
cd05077	262	cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) do	6e-04
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	7e-04
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	8e-04
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	8e-04
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	9e-04
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	0.001
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	0.001
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	0.002
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	0.002
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	0.002
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	0.002
cd05037	259	cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom	0.003
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	0.004
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	0.004

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 77.9 bits (193), Expect = 2e-17
 Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 7/108 (6%)

Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
           ++SH +I++L+G C +     +  E +  G+L D +        E L +K  L++A+ IA
Sbjct: 57  KLSHPNIVRLLGVCTQGEPLYIVTEYMPGGDLLDFLRK----HGEKLTLKDLLQMALQIA 112

Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGT 220
             + YL     +  V+RD    + L  E  V K+ DF LS  I E   
Sbjct: 113 KGMEYLES---KNFVHRDLAARNCLVTENLVVKISDFGLSRDIYEDDY 157

Length = 258

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 78.0 bits (193), Expect = 3e-17
 Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 7/107 (6%)

Query: 112 AQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
            ++ H +++KL+G C E     +  E +E G+L   +          L +   L  A+ I
Sbjct: 56  RKLDHPNVVKLLGVCTEEEPLYIVMEYMEGGDLLSYLRKNR----PKLSLSDLLSFALQI 111

Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG 218
           A  + YL     +  ++RD    + L  E  V K+ DF LS  + + 
Sbjct: 112 ARGMEYLES---KNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDD 155

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 76.4 bits (189), Expect = 9e-17
 Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 6/107 (5%)

Query: 112 AQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
            ++ H +I+KL+G C E    ++  E +  G+L D  L  ++P+   L +   L  A+ I
Sbjct: 56  RKLDHPNIVKLLGVCTEEEPLMIVMEYMPGGDLLDY-LRKNRPKE--LSLSDLLSFALQI 112

Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG 218
           A  + YL     +  ++RD    + L  E  V K+ DF LS  + + 
Sbjct: 113 ARGMEYLES---KNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDD 156

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 74.9 bits (185), Expect = 4e-16
 Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 7/111 (6%)

Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILS----ASQPQTEPLLMKHRLKIA 168
           ++ H ++++L+G C E     L  E +E G+L D +         P+   L +K  L  A
Sbjct: 52  KLGHPNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFA 111

Query: 169 MDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGG 219
           + IA  + YL     +  V+RD    + L  E+ V K+ DF LS  + +  
Sbjct: 112 IQIAKGMEYLAS---KKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDD 159

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 72.3 bits (178), Expect = 2e-15
 Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 8/108 (7%)

Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
           +++H +I+KL G   +     L  E  E G+L+D +       +E       L+I + I 
Sbjct: 47  KLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSE----DEILRILLQIL 102

Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEEN-VAKMFDFSLSISIPEGG 219
             L YLH      I++RD K  +IL + +N   K+ DF LS  +    
Sbjct: 103 EGLEYLHS---NGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDK 147

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 63.6 bits (155), Expect = 5e-12
 Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 18/113 (15%)

Query: 112 AQMSHDHILKLIGCCLETPIPILAFESVEYGNL--------RDRILSASQPQTE-PLLMK 162
               H++I+K  G C E   PI+ FE +E+G+L         D     S       L + 
Sbjct: 63  TNFQHENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLS 122

Query: 163 HRLKIAMDIAHALAYL---HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
             L+IA+ IA  + YL   HF      V+RD  T + L   + V K+ DF +S
Sbjct: 123 QLLQIAVQIASGMVYLASQHF------VHRDLATRNCLVGYDLVVKIGDFGMS 169

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 59.0 bits (143), Expect = 2e-10
 Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 9/107 (8%)

Query: 114 MSHDHILKLIGCCLET--PIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
           + H++I+K  G C +       L  E +  G+LRD +    Q   + + +K  L  +  I
Sbjct: 63  LDHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYL----QRHRDQINLKRLLLFSSQI 118

Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG 218
              + YL     +  ++RD    +IL   E++ K+ DF L+  +PE 
Sbjct: 119 CKGMDYLG---SQRYIHRDLAARNILVESEDLVKISDFGLAKVLPED 162

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 58.3 bits (142), Expect = 3e-10
 Identities = 29/108 (26%), Positives = 45/108 (41%), Gaps = 8/108 (7%)

Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
           ++ H +I++L     +     L  E  E G+L D +          L           I 
Sbjct: 53  KLKHPNIVRLYDVFEDEDKLYLVMEYCEGGDLFDLLKK-----RGRLSEDEARFYLRQIL 107

Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGT 220
            AL YLH    + IV+RD K  +IL +E+   K+ DF L+  +  G  
Sbjct: 108 SALEYLH---SKGIVHRDLKPENILLDEDGHVKLADFGLARQLDPGEK 152

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 56.9 bits (138), Expect = 9e-10
 Identities = 34/108 (31%), Positives = 49/108 (45%), Gaps = 8/108 (7%)

Query: 105 INNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHR 164
              I    ++SH +I++LI    +     L  E  E G+L D +         PL     
Sbjct: 46  RREIRILRRLSHPNIVRLIDAFEDKDHLYLVMEYCEGGDLFDYLSRGG-----PLSEDEA 100

Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
            KIA+ I   L YLH      I++RD K  +IL +E  V K+ DF L+
Sbjct: 101 KKIALQILRGLEYLH---SNGIIHRDLKPENILLDENGVVKIADFGLA 145

Length = 260

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 55.0 bits (132), Expect = 5e-09
 Identities = 34/116 (29%), Positives = 52/116 (44%), Gaps = 21/116 (18%)

Query: 114 MSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTE-----------PLLMK 162
           + H HI++  G C E    ++ FE + +G+L +R L +  P  +            L + 
Sbjct: 64  LQHQHIVRFYGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKILAGGEDVAPGQLTLG 122

Query: 163 HRLKIAMDIAHALAY---LHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
             L IA  IA  + Y   LHF      V+RD  T + L  +  V K+ DF +S  I
Sbjct: 123 QMLAIASQIASGMVYLASLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDI 172

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 54.8 bits (132), Expect = 6e-09
 Identities = 40/121 (33%), Positives = 54/121 (44%), Gaps = 20/121 (16%)

Query: 112 AQMSHDHILKLIGCCLETPIPILAFESVEYGN----LRDR----ILSASQPQTE------ 157
           A+  H +I+KL+G C       L FE + YG+    LR R      S S   +       
Sbjct: 63  AEFDHPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGL 122

Query: 158 ---PLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSIS 214
              PL    +L IA  +A  +AYL     R  V+RD  T + L  E  V K+ DF LS +
Sbjct: 123 NPLPLSCTEQLCIAKQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRN 179

Query: 215 I 215
           I
Sbjct: 180 I 180

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 53.9 bits (130), Expect = 1e-08
 Identities = 30/111 (27%), Positives = 58/111 (52%), Gaps = 8/111 (7%)

Query: 113 QMSHDHILKLIGCCLE-TPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
            + H ++++L+G  L+  P+ I+  E +  G+L D + S  +     + +  +L  A+D+
Sbjct: 56  TLRHPNLVQLLGVVLQGNPLYIVT-EYMAKGSLVDYLRSRGR---AVITLAQQLGFALDV 111

Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSG 222
              + YL     +  V+RD    ++L +E+ VAK+ DF L+    +G  SG
Sbjct: 112 CEGMEYLE---EKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSG 159

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 53.4 bits (128), Expect = 2e-08
 Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 11/107 (10%)

Query: 114 MSHDHILKLIGCCLET--PIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
           + H++I+K  GCC E       L  E V  G+LRD +        + LL       A  I
Sbjct: 63  LYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPKHKLNLAQLLLF------AQQI 116

Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG 218
              +AYLH    +  ++RD    ++L + + + K+ DF L+ ++PEG
Sbjct: 117 CEGMAYLH---SQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 160

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 51.5 bits (123), Expect = 7e-08
 Identities = 31/124 (25%), Positives = 51/124 (41%), Gaps = 22/124 (17%)

Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQ------------------- 153
           Q++H H++KL G C +    +L  E  +YG+LR  +  + +                   
Sbjct: 59  QVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDN 118

Query: 154 PQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSI 213
           P    L M   +  A  I+  + YL       +V+RD    ++L  E    K+ DF LS 
Sbjct: 119 PDERALTMGDLISFAWQISRGMQYLA---EMKLVHRDLAARNVLVAEGRKMKISDFGLSR 175

Query: 214 SIPE 217
            + E
Sbjct: 176 DVYE 179

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 51.6 bits (123), Expect = 9e-08
 Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 19/111 (17%)

Query: 114 MSHDHILKLIGCCLETPIPILAFESVEYGNLR--------DRILSAS-QPQTEPLLMKHR 164
           + H+HI+K  G C+E    I+ FE +++G+L         D +L A      E L     
Sbjct: 64  LQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAE-LTQSQM 122

Query: 165 LKIAMDIAHALAYL---HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
           L IA  IA  + YL   HF      V+RD  T + L  E  + K+ DF +S
Sbjct: 123 LHIAQQIAAGMVYLASQHF------VHRDLATRNCLVGENLLVKIGDFGMS 167

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 50.3 bits (120), Expect = 2e-07
 Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 17/141 (12%)

Query: 77  ILYKGFWQE-RLISVMRFRE---SNRDGHGSCINNIVYAAQMSHDHILKLIGCCLE-TPI 131
           +++ G+W E R +++   RE   S  D     I       ++SH  +++L G C E +PI
Sbjct: 19  LVWLGYWLEKRKVAIKTIREGAMSEED----FIEEAQVMMKLSHPKLVQLYGVCTERSPI 74

Query: 132 PILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDF 191
             L FE +E+G L D + +    Q      +  L + +D+   +AYL       +++RD 
Sbjct: 75  -CLVFEFMEHGCLSDYLRA----QRGKFSQETLLGMCLDVCEGMAYLE---SSNVIHRDL 126

Query: 192 KTAHILFNEENVAKMFDFSLS 212
              + L  E  V K+ DF ++
Sbjct: 127 AARNCLVGENQVVKVSDFGMT 147

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 49.3 bits (118), Expect = 3e-07
 Identities = 25/106 (23%), Positives = 51/106 (48%), Gaps = 7/106 (6%)

Query: 114 MSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAH 173
           + H+++++L G  L  P+ ++  E    G+L DR+    +      L+      A+ IA+
Sbjct: 53  LDHENLIRLYGVVLTHPL-MMVTELAPLGSLLDRL---RKDALGHFLISTLCDYAVQIAN 108

Query: 174 ALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGG 219
            + YL     +  ++RD    +IL   ++  K+ DF L  ++P+  
Sbjct: 109 GMRYLE---SKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNE 151

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 49.3 bits (118), Expect = 4e-07
 Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 16/112 (14%)

Query: 116 HDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQ------------TEPLLMKH 163
           H +I+ L+G C +     +  E   +GNLRD  L A +P              E L  K 
Sbjct: 75  HKNIINLLGVCTQEGPLYVVVEYAAHGNLRD-FLRARRPPGEYASPDDPRPPEETLTQKD 133

Query: 164 RLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
            +  A  +A  + +L     +  ++RD    ++L  E++V K+ DF L+  I
Sbjct: 134 LVSFAYQVARGMEFLA---SKKCIHRDLAARNVLVTEDHVMKIADFGLARDI 182

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 49.1 bits (118), Expect = 4e-07
 Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 7/111 (6%)

Query: 105 INNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHR 164
           IN I    +  H +I+K  G  L+     +  E    G+L+D + S +Q  TE  +    
Sbjct: 45  INEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAY-- 102

Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
             +  ++   L YLH      I++RD K A+IL   +   K+ DF LS  +
Sbjct: 103 --VCKELLKGLEYLHS---NGIIHRDIKAANILLTSDGEVKLIDFGLSAQL 148

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 49.0 bits (117), Expect = 5e-07
 Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 8/100 (8%)

Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
           Q  H HI+KLIG   E P+ I+  E    G LR  +    Q     L +   +  +  ++
Sbjct: 63  QFDHPHIVKLIGVITENPVWIV-MELAPLGELRSYL----QVNKYSLDLASLILYSYQLS 117

Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
            ALAYL     +  V+RD    ++L +  +  K+ DF LS
Sbjct: 118 TALAYLE---SKRFVHRDIAARNVLVSSPDCVKLGDFGLS 154

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 49.0 bits (117), Expect = 5e-07
 Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 17/120 (14%)

Query: 111 AAQM---SHDHILKLIGCCLET------PIPILAFESVEYGNLRDRILS---ASQPQTEP 158
           AA M    H +++KLIG C E       P P++    +++G+L   +L       P+  P
Sbjct: 52  AACMKDFDHPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLP 111

Query: 159 LLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG 218
           L     LK  +DIA  + YL     R  ++RD    + +  E+    + DF LS  I  G
Sbjct: 112 LQT--LLKFMVDIALGMEYLS---NRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSG 166

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 48.3 bits (115), Expect = 8e-07
 Identities = 33/138 (23%), Positives = 68/138 (49%), Gaps = 11/138 (7%)

Query: 78  LYKGFWQE--RLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCC-LETPIPIL 134
           +Y+G W++    ++V   +E   +     +       ++ H ++++L+G C  E P  I+
Sbjct: 22  VYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 80

Query: 135 AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTA 194
             E + YGNL D +   ++ +   +++   L +A  I+ A+ YL     +  ++RD    
Sbjct: 81  T-EFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAAR 133

Query: 195 HILFNEENVAKMFDFSLS 212
           + L  E ++ K+ DF LS
Sbjct: 134 NCLVGENHLVKVADFGLS 151

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 47.7 bits (113), Expect = 1e-06
 Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 14/108 (12%)

Query: 116 HDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHR----------- 164
           H +I+ L+G C       +A E   YGNL D +  +   +T+P   K             
Sbjct: 62  HPNIINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQL 121

Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
           L+ A D+A  + YL     +  ++RD    ++L  E   +K+ DF LS
Sbjct: 122 LQFASDVATGMQYLS---EKQFIHRDLAARNVLVGENLASKIADFGLS 166

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 47.7 bits (113), Expect = 1e-06
 Identities = 36/114 (31%), Positives = 55/114 (48%), Gaps = 9/114 (7%)

Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
           Q  H +I+KLIG C +     +  E V  G+     LS  + + + L  K  +K A+D A
Sbjct: 48  QYDHPNIVKLIGVCTQRQPIYIVMELVPGGDF----LSFLRKKKDELKTKQLVKFALDAA 103

Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG--GTSGAK 224
             +AYL     +  ++RD    + L  E NV K+ DF +S    +G   +SG K
Sbjct: 104 AGMAYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLK 154

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 47.4 bits (111), Expect = 2e-06
 Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 6/108 (5%)

Query: 115 SHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHA 174
              +I+KL     +     L  E V+ G+L D +      +  PL     L I   I  A
Sbjct: 56  HPPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLL--KKIGRKGPLSESEALFILAQILSA 113

Query: 175 LAYLHFGFPRPIVYRDFKTAHILFNEE-NVAKMFDFSLSISIPEGGTS 221
           L YLH    + I++RD K  +IL + +  V K+ DF L+  +P+ G++
Sbjct: 114 LEYLH---SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGST 158

Length = 384

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 47.3 bits (112), Expect = 2e-06
 Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 14/108 (12%)

Query: 116 HDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEP-----------LLMKHR 164
           H +I+ L+G C       LA E   +GNL D +  +   +T+P           L  +  
Sbjct: 67  HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 126

Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
           L  A D+A  + YL     +  ++RD    +IL  E  VAK+ DF LS
Sbjct: 127 LHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLS 171

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 47.1 bits (112), Expect = 2e-06
 Identities = 30/132 (22%), Positives = 60/132 (45%), Gaps = 15/132 (11%)

Query: 83  WQERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYG 142
           W+E  +++ R  E  R      +N IV  + + H +I+      ++    ++  E    G
Sbjct: 30  WKE--VNLTRLSEKERR---DALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANGG 84

Query: 143 NLRDRILSASQPQTEPLLMKHRLKIAM--DIAHALAYLHFGFPRPIVYRDFKTAHILFNE 200
            L D+I+     + +  L +  + +     I  A++Y+H      I++RD KT +I   +
Sbjct: 85  TLYDKIV-----RQKGQLFEEEMVLWYLFQIVSAVSYIH---KAGILHRDIKTLNIFLTK 136

Query: 201 ENVAKMFDFSLS 212
             + K+ DF +S
Sbjct: 137 AGLIKLGDFGIS 148

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 46.2 bits (109), Expect = 4e-06
 Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 22/117 (18%)

Query: 114 MSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLL------------M 161
           + H+HI+K  G C +    I+ FE +++G+L ++ L A  P    L+            +
Sbjct: 64  LQHEHIVKFYGVCGDGDPLIMVFEYMKHGDL-NKFLRAHGPDAMILVDGQPRQAKGELGL 122

Query: 162 KHRLKIAMDIAHALAYL---HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
              L IA  IA  + YL   HF      V+RD  T + L     + K+ DF +S  +
Sbjct: 123 SQMLHIASQIASGMVYLASQHF------VHRDLATRNCLVGANLLVKIGDFGMSRDV 173

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 46.0 bits (109), Expect = 6e-06
 Identities = 23/120 (19%), Positives = 52/120 (43%), Gaps = 8/120 (6%)

Query: 94  RESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILS-AS 152
            + NR      I+     A++   +I++     L+     +  E  E G+L   +     
Sbjct: 36  SKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRG 95

Query: 153 QPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
           +P  E  + +  ++I +     LA+LH    + I++RD K+ ++  +  +  K+ D  ++
Sbjct: 96  RPLPEDQVWRFFIQILL----GLAHLH---SKKILHRDIKSLNLFLDAYDNVKIGDLGVA 148

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 45.9 bits (110), Expect = 6e-06
 Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 12/107 (11%)

Query: 113 QMSHDHILKLIG-CCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
           ++ H +I+KL+     E  +  L FE  +  +L+  +     P +  L+      I   +
Sbjct: 54  ELKHPNIVKLLDVIHTERKL-YLVFEYCDM-DLKKYLDKRPGPLSPNLI----KSIMYQL 107

Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS--ISIP 216
              LAY H      I++RD K  +IL N + V K+ DF L+    IP
Sbjct: 108 LRGLAYCH---SHRILHRDLKPQNILINRDGVLKLADFGLARAFGIP 151

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 45.6 bits (109), Expect = 6e-06
 Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 13/128 (10%)

Query: 88  ISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDR 147
           I +    E  R+     +N +    +++H +I+K      E     +  E  + G+L  +
Sbjct: 33  IDLSNMSEKERE---DALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYADGGDLSQK 89

Query: 148 ILS---ASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVA 204
           I       +P  E  ++   +++ +    AL YLH    R I++RD K  +I      + 
Sbjct: 90  IKKQKKEGKPFPEEQILDWFVQLCL----ALKYLH---SRKILHRDIKPQNIFLTSNGLV 142

Query: 205 KMFDFSLS 212
           K+ DF +S
Sbjct: 143 KLGDFGIS 150

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 45.7 bits (108), Expect = 6e-06
 Identities = 31/123 (25%), Positives = 57/123 (46%), Gaps = 12/123 (9%)

Query: 104 CINNIVYAAQMSHDHILKLIGCCLET------PIPILAFESVEYGNLRDRILSASQPQTE 157
            +       +  H +++KLIG  L +      PIP++    +++G+L   +L  S+   E
Sbjct: 48  FLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLL-MSRIGEE 106

Query: 158 P--LLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
           P  L ++  ++  +DIA  + YL     +  ++RD    + + NE     + DF LS  I
Sbjct: 107 PFTLPLQTLVRFMIDIASGMEYLS---SKNFIHRDLAARNCMLNENMTVCVADFGLSKKI 163

Query: 216 PEG 218
             G
Sbjct: 164 YSG 166

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 45.5 bits (108), Expect = 8e-06
 Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 11/113 (9%)

Query: 115 SHDHILKLIGCCL---ETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
              +I+K  G  L    + I I A E  E G+L D I    + +   +  K   KIA  +
Sbjct: 57  KSPYIVKYYGAFLDESSSSIGI-AMEYCEGGSL-DSIYKKVKKRGGRIGEKVLGKIAESV 114

Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAK 224
              L+YLH    R I++RD K ++IL   +   K+ DF +S    E   S A 
Sbjct: 115 LKGLSYLH---SRKIIHRDIKPSNILLTRKGQVKLCDFGVS---GELVNSLAG 161

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 45.4 bits (107), Expect = 8e-06
 Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 14/115 (12%)

Query: 113 QMSHDHILKLIGCCLET------PIPILAFESVEYGNLRDRILSA---SQPQTEPLLMKH 163
           +  H ++++LIG CL+T      P P++    +++G+L   +L +     PQ  P  M  
Sbjct: 56  EFDHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQM-- 113

Query: 164 RLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG 218
            +K   DIA  + YL     +  ++RD    + + NE     + DF LS  I  G
Sbjct: 114 LVKFMTDIASGMEYLS---SKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNG 165

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 45.7 bits (108), Expect = 8e-06
 Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 18/110 (16%)

Query: 116 HDHILKLIGCCL-ETPIPILAFESVEYGNLRDRILSASQPQT------------EPLLMK 162
           H +I+ L+G C  E P+ ++  E    GNLR+  L A +P              E L  K
Sbjct: 77  HKNIINLLGVCTQEGPLYVIV-EYAAKGNLRE-FLRARRPPGPDYTFDITKVPEEQLSFK 134

Query: 163 HRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
             +  A  +A  + YL     R  ++RD    ++L  E+NV K+ DF L+
Sbjct: 135 DLVSCAYQVARGMEYLE---SRRCIHRDLAARNVLVTEDNVMKIADFGLA 181

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 45.2 bits (108), Expect = 9e-06
 Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 10/113 (8%)

Query: 113 QMSHDHILKLIGCCL-ETPIPILAF-ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMD 170
            + H +I++  G    E    +  F E V  G+L   +      +    +++   +    
Sbjct: 55  SLQHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLL--KKFGKLPEPVIRKYTR---Q 109

Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGA 223
           I   LAYLH      IV+RD K A+IL + + V K+ DF  +  + +  T   
Sbjct: 110 ILEGLAYLH---SNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEG 159

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 45.2 bits (107), Expect = 9e-06
 Identities = 36/118 (30%), Positives = 54/118 (45%), Gaps = 19/118 (16%)

Query: 111 AAQMS---HDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEP--LLMKHRL 165
           A  MS   H +I+KL+G CL      +  E +E G+L   +  A   +  P  L +K  L
Sbjct: 50  AHLMSNFNHPNIVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELL 109

Query: 166 KIAMDIAHALAYL---HFGFPRPIVYRDFKTAHILFNEEN-----VAKMFDFSLSISI 215
            I +D+A    YL   HF      ++RD    + L +E+      V K+ DF L+  I
Sbjct: 110 DICLDVAKGCVYLEQMHF------IHRDLAARNCLVSEKGYDADRVVKIGDFGLARDI 161

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 45.0 bits (107), Expect = 1e-05
 Identities = 28/108 (25%), Positives = 48/108 (44%), Gaps = 11/108 (10%)

Query: 112 AQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHR------- 164
           +++S  +I +L+G C   P   +  E +E G+L ++ L     +T  L    +       
Sbjct: 74  SRLSDPNIARLLGVCTVDPPLCMIMEYMENGDL-NQFLQKHVAETSGLACNSKSLSFSTL 132

Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
           L +A  IA  + YL        V+RD  T + L  +    K+ DF +S
Sbjct: 133 LYMATQIASGMRYLE---SLNFVHRDLATRNCLVGKNYTIKIADFGMS 177

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 44.6 bits (106), Expect = 1e-05
 Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 29/111 (26%)

Query: 112 AQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHR------- 164
           AQ+ H  I++LIG C   P+ +L  E    G L               L K R       
Sbjct: 51  AQLDHPCIVRLIGVCKGEPL-MLVMELAPLGPLLK------------YLKKRREIPVSDL 97

Query: 165 LKIAMDIAHALAYL---HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
            ++A  +A  +AYL   HF      V+RD    ++L    + AK+ DF +S
Sbjct: 98  KELAHQVAMGMAYLESKHF------VHRDLAARNVLLVNRHQAKISDFGMS 142

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 44.7 bits (105), Expect = 1e-05
 Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 14/108 (12%)

Query: 116 HDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEP-----------LLMKHR 164
           H +I+ L+G C       LA E   +GNL D +  +   +T+P           L  +  
Sbjct: 55  HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 114

Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
           L  A D+A  + YL     +  ++RD    +IL  E  VAK+ DF LS
Sbjct: 115 LHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLS 159

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 44.5 bits (106), Expect = 1e-05
 Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 18/141 (12%)

Query: 79  YKGFWQE-------RLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPI 131
           YKG   E       + IS+ + +E       S +  I     + H +I+K IG    +  
Sbjct: 17  YKGLNLETGDFVAIKQISLEKIKEEA---LKSIMQEIDLLKNLKHPNIVKYIGSIETSDS 73

Query: 132 PILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDF 191
             +  E  E G+LR +I+    P  E L+  +  ++       LAYLH    + +++RD 
Sbjct: 74  LYIILEYAENGSLR-QIIKKFGPFPESLVAVYVYQVL----QGLAYLH---EQGVIHRDI 125

Query: 192 KTAHILFNEENVAKMFDFSLS 212
           K A+IL  ++ V K+ DF ++
Sbjct: 126 KAANILTTKDGVVKLADFGVA 146

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 44.4 bits (105), Expect = 2e-05
 Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 9/101 (8%)

Query: 113 QMSHDHILKLIGCCLET-PIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
           ++SH ++++L G C +  PI I+  E +  G L + +    + +   L  +  L +  D+
Sbjct: 55  KLSHPNLVQLYGVCTKQRPIFIV-TEYMANGCLLNYL----RERKGKLGTEWLLDMCSDV 109

Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
             A+ YL        ++RD    + L  E+NV K+ DF L+
Sbjct: 110 CEAMEYLE---SNGFIHRDLAARNCLVGEDNVVKVSDFGLA 147

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 44.2 bits (104), Expect = 2e-05
 Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 9/101 (8%)

Query: 113 QMSHDHILKLIGCCLET-PIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
           Q SH +I++LIG C +  PI I+  E V+ G+     L+  + +   L +K  +++  + 
Sbjct: 49  QYSHPNIVRLIGVCTQKQPIYIV-MELVQGGDF----LTFLRTEGPRLKVKELIQMVENA 103

Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
           A  + YL     +  ++RD    + L  E+NV K+ DF +S
Sbjct: 104 AAGMEYLE---SKHCIHRDLAARNCLVTEKNVLKISDFGMS 141

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 44.2 bits (104), Expect = 2e-05
 Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 19/112 (16%)

Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNL------RDRILSASQPQTEPLLMKHRLK 166
           ++ H ++++L+G  L   + I+  E +  GNL      R R L  S  Q         L+
Sbjct: 55  KLHHKNLVRLLGVILHNGLYIV-MELMSKGNLVNFLRTRGRAL-VSVIQL--------LQ 104

Query: 167 IAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG 218
            ++D+A  + YL     + +V+RD    +IL +E+ VAK+ DF L+     G
Sbjct: 105 FSLDVAEGMEYLE---SKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG 153

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 44.0 bits (104), Expect = 2e-05
 Identities = 33/142 (23%), Positives = 68/142 (47%), Gaps = 9/142 (6%)

Query: 78  LYKGFWQERL-ISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIG-CCLETPIPILA 135
           +++G W+ R+ +++   +  +          +    ++ H H++ L   C +  P+ I+ 
Sbjct: 22  VWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIIT 81

Query: 136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
            E +E G+L   + S   P+ + L +   + +A  +A  +AYL     +  ++RD    +
Sbjct: 82  -ELMEKGSLLAFLRS---PEGQVLPVASLIDMACQVAEGMAYLE---EQNSIHRDLAARN 134

Query: 196 ILFNEENVAKMFDFSLSISIPE 217
           IL  E+ V K+ DF L+  I E
Sbjct: 135 ILVGEDLVCKVADFGLARLIKE 156

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 44.0 bits (104), Expect = 3e-05
 Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 12/111 (10%)

Query: 112 AQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTE---PLLMKHRLKIA 168
           ++ +H +I++LIG   E     +  E +  G+L+   L  ++P+ E    L MK  L  A
Sbjct: 64  SKFNHQNIVRLIGVSFERLPRFILLELMAGGDLKS-FLRENRPRPERPSSLTMKDLLFCA 122

Query: 169 MDIAHALAYLH-FGFPRPIVYRDFKTAHILFN---EENVAKMFDFSLSISI 215
            D+A    YL    F    ++RD    + L        VAK+ DF ++  I
Sbjct: 123 RDVAKGCKYLEENHF----IHRDIAARNCLLTCKGPGRVAKIADFGMARDI 169

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 43.3 bits (103), Expect = 4e-05
 Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 10/92 (10%)

Query: 134 LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKT 193
           +  E ++ G+L D +L       EP+L      IA  I   L YLH    R I++RD K 
Sbjct: 76  IVLEYMDGGSLAD-LLKKVGKIPEPVLAY----IARQILKGLDYLHT--KRHIIHRDIKP 128

Query: 194 AHILFNEENVAKMFDFSLSISIPEGGTSGAKC 225
           +++L N +   K+ DF +S  +     +  +C
Sbjct: 129 SNLLINSKGEVKIADFGISKVLE---NTLDQC 157

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 42.9 bits (102), Expect = 5e-05
 Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 16/104 (15%)

Query: 113 QMSHDHILKLIGCCLETPIP--ILAFESVEY---GNLRDRILSASQPQTEPLLMKHRLKI 167
           ++ H +I++L             + FE +++   G L    +  ++ Q     +K  +K 
Sbjct: 54  KLRHPNIVRLKEIVTSKGKGSIYMVFEYMDHDLTGLLDSPEVKFTESQ-----IKCYMK- 107

Query: 168 AMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL 211
              +   L YLH      I++RD K ++IL N + V K+ DF L
Sbjct: 108 --QLLEGLQYLH---SNGILHRDIKGSNILINNDGVLKLADFGL 146

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 43.0 bits (101), Expect = 5e-05
 Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 7/101 (6%)

Query: 113 QMSHDHILKLIGCCLETPIPI-LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
           Q+ H ++++L+G  +E    + +  E +  G+L D + S  +     L     LK ++D+
Sbjct: 55  QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR---SVLGGDCLLKFSLDV 111

Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
             A+ YL        V+RD    ++L +E+NVAK+ DF L+
Sbjct: 112 CEAMEYLE---ANNFVHRDLAARNVLVSEDNVAKVSDFGLT 149

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 42.8 bits (101), Expect = 6e-05
 Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 9/101 (8%)

Query: 113 QMSHDHILKLIGCCLET-PIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
           Q  H +I+KLIG C++  PI I+  E V  G+L    L+  + +   L +K  L++++D 
Sbjct: 48  QYDHPNIVKLIGVCVQKQPIYIV-MELVPGGSL----LTFLRKKKNRLTVKKLLQMSLDA 102

Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
           A  + YL     +  ++RD    + L  E NV K+ DF +S
Sbjct: 103 AAGMEYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMS 140

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 42.4 bits (100), Expect = 8e-05
 Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 4/108 (3%)

Query: 104 CINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKH 163
           C+  I    Q+ H +++K +   +E     +  E  + G+L  R++   + Q   +  + 
Sbjct: 49  CLKEIDLLKQLDHPNVIKYLASFIENNELNIVLELADAGDLS-RMIKHFKKQKRLIPERT 107

Query: 164 RLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL 211
             K  + +  AL ++H    + I++RD K A++      V K+ D  L
Sbjct: 108 IWKYFVQLCSALEHMH---SKRIMHRDIKPANVFITATGVVKLGDLGL 152

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 41.9 bits (99), Expect = 1e-04
 Identities = 30/109 (27%), Positives = 46/109 (42%), Gaps = 8/109 (7%)

Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
           Q+ H++I+ L           L FE VE   L    L AS     P  ++        + 
Sbjct: 56  QLRHENIVNLKEAFRRKGRLYLVFEYVERTLLEL--LEASPGGLPPDAVR---SYIWQLL 110

Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTS 221
            A+AY H      I++RD K  +IL +E  V K+ DF  + ++     S
Sbjct: 111 QAIAYCH---SHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPAS 156

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 41.7 bits (98), Expect = 1e-04
 Identities = 26/106 (24%), Positives = 51/106 (48%), Gaps = 9/106 (8%)

Query: 112 AQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTE-----PLLMKHRLK 166
            ++SH ++++L+G C E     +  E  + G+L+ + L A++ + E     PL  K ++ 
Sbjct: 63  RKLSHKNVVRLLGLCREAEPHYMILEYTDLGDLK-QFLRATKSKDEKLKPPPLSTKQKVA 121

Query: 167 IAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
           +   IA  + +L        V+RD    + L + +   K+   SLS
Sbjct: 122 LCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVKVSLLSLS 164

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 41.8 bits (99), Expect = 1e-04
 Identities = 31/126 (24%), Positives = 55/126 (43%), Gaps = 10/126 (7%)

Query: 84  QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGN 143
           +E  I  MR R+ N++     IN I+      H +I+      L      +  E ++ G+
Sbjct: 45  KEVAIKKMRLRKQNKE---LIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDGGS 101

Query: 144 LRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENV 203
           L D I        EP        +  ++   L YLH    + +++RD K+ +IL +++  
Sbjct: 102 LTDIITQNFVRMNEP----QIAYVCREVLQGLEYLH---SQNVIHRDIKSDNILLSKDGS 154

Query: 204 AKMFDF 209
            K+ DF
Sbjct: 155 VKLADF 160

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 41.9 bits (98), Expect = 1e-04
 Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 24/113 (21%)

Query: 116 HDHILKLIGCCLET-PIPILAFESVEY---GNLRDRILSASQPQ------------TEPL 159
           H +I+ L+G C +  P+ +L    VEY   GNLR+  L A +P              E L
Sbjct: 77  HKNIINLLGACTQDGPLYVL----VEYASKGNLRE-YLRARRPPGMDYSFDTCKLPEEQL 131

Query: 160 LMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
             K  +  A  +A  + YL     +  ++RD    ++L  E+NV K+ DF L+
Sbjct: 132 TFKDLVSCAYQVARGMEYLA---SQKCIHRDLAARNVLVTEDNVMKIADFGLA 181

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 7/96 (7%)

Query: 117 DHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALA 176
            +I+   G  L      +  E ++ G+L DRI     P    +L K    IA+ +   L 
Sbjct: 63  PYIVSFYGAFLNENNICMCMEFMDCGSL-DRIYKKGGPIPVEILGK----IAVAVVEGLT 117

Query: 177 YLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
           YL+      I++RD K ++IL N     K+ DF +S
Sbjct: 118 YLYN--VHRIMHRDIKPSNILVNSRGQIKLCDFGVS 151

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 41.1 bits (96), Expect = 2e-04
 Identities = 32/142 (22%), Positives = 66/142 (46%), Gaps = 15/142 (10%)

Query: 78  LYKGFWQ---ERL---ISVMRFRESNRDGHGSCINNIVYA-AQMSHDHILKLIGCCLETP 130
           +YKG W    E++   +++   RE+        I +  Y  A + + H+ +L+G CL + 
Sbjct: 23  VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 82

Query: 131 IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRD 190
           + ++  + + +G L D +    +   + +  ++ L   + IA  + YL     R +V+RD
Sbjct: 83  VQLIT-QLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---ERRLVHRD 134

Query: 191 FKTAHILFNEENVAKMFDFSLS 212
               ++L       K+ DF L+
Sbjct: 135 LAARNVLVKTPQHVKITDFGLA 156

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 41.2 bits (96), Expect = 3e-04
 Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 14/108 (12%)

Query: 116 HDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTE-----------PLLMKHR 164
           H +I+ L+G C +     +  E    GNLR+ + +   P  E            +  K  
Sbjct: 80  HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDL 139

Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
           +     +A  + YL     +  ++RD    ++L  E NV K+ DF L+
Sbjct: 140 VSCTYQVARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLA 184

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 40.5 bits (95), Expect = 3e-04
 Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 18/114 (15%)

Query: 112 AQMSHDHILKLIGCCL-ETPIPILAFESVEYGNLRDRILSASQPQTE------------P 158
           + + H +I+ L+G C  E P  +L FE + +G+L + ++  S P ++             
Sbjct: 63  SDLQHPNIVCLLGVCTKEQPTCML-FEYLAHGDLHEFLVRNS-PHSDVGAESGDETVKSS 120

Query: 159 LLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
           L     L IA+ IA  + YL        V+RD    + L  E    K+ DF LS
Sbjct: 121 LDCSDFLHIAIQIAAGMEYLS---SHHFVHRDLAARNCLVGEGLTVKISDFGLS 171

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 39.9 bits (94), Expect = 5e-04
 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 3/46 (6%)

Query: 167 IAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
           I       L YLH       ++RD K  +IL NEE  AK+ DF +S
Sbjct: 104 ILYQTLKGLEYLHS---NKKIHRDIKAGNILLNEEGQAKLADFGVS 146

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 40.0 bits (93), Expect = 5e-04
 Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 14/111 (12%)

Query: 116 HDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTE-----------PLLMKHR 164
           H +I+ L+G C +     +  E    GNLR+ + +   P  E            L  K  
Sbjct: 83  HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDL 142

Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
           +  A  +A  + YL     +  ++RD    ++L  E+NV K+ DF L+  I
Sbjct: 143 VSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 190

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 39.9 bits (93), Expect = 6e-04
 Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 10/119 (8%)

Query: 114 MSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAH 173
           + H +I++ +G CL+     +  E V  G++   IL+   P  EP+  K+       I  
Sbjct: 59  LKHVNIVQYLGTCLDDNTISIFMEFVPGGSI-SSILNRFGPLPEPVFCKY----TKQILD 113

Query: 174 ALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKC--LKSER 230
            +AYLH      +V+RD K  +++     + K+ DF  +  +   G  G     LKS  
Sbjct: 114 GVAYLH---NNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMH 169

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score = 39.7 bits (93), Expect = 6e-04
 Identities = 30/106 (28%), Positives = 56/106 (52%), Gaps = 13/106 (12%)

Query: 114 MSHDHILKLIGCCLETP-IPILAFESVEYGNLRD-----RILSASQPQTEPLLMKHRL-K 166
           +SH +IL ++  C+E    P + +  + +GNL+      R+  A+ PQ    L   +L  
Sbjct: 65  LSHQNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQA---LSTQQLVH 121

Query: 167 IAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
           +A+ IA  ++YLH    R ++++D    + + +EE   K+ D +LS
Sbjct: 122 MAIQIACGMSYLH---KRGVIHKDIAARNCVIDEELQVKITDNALS 164

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|173643 cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 39.9 bits (93), Expect = 6e-04
 Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 7/91 (7%)

Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
           Q+SH HI+ L G C+     I+  E VE+G L D  +     +++ L    + K+A  +A
Sbjct: 60  QVSHKHIVLLYGVCVRDVENIMVEEFVEFGPL-DLFM---HRKSDVLTTPWKFKVAKQLA 115

Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENV 203
            AL+YL     + +V+ +  T +IL   E +
Sbjct: 116 SALSYLE---DKDLVHGNVCTKNILLAREGI 143

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 262

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 39.7 bits (92), Expect = 7e-04
 Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 8/101 (7%)

Query: 112 AQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
           A M H H+++L+G CL +P   L  + + +G L D +          LL    L   + I
Sbjct: 64  ASMDHPHLVRLLGVCL-SPTIQLVTQLMPHGCLLDYVHEHKDNIGSQLL----LNWCVQI 118

Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
           A  + YL     R +V+RD    ++L    N  K+ DF L+
Sbjct: 119 AKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLA 156

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 39.2 bits (92), Expect = 8e-04
 Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 8/101 (7%)

Query: 113 QMSHDHILKLIGCCLET-PIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
           ++ HD +++L   C E  PI I+  E +  G+L D +      + + L +   + +A  I
Sbjct: 57  KLRHDKLVQLYAVCSEEEPIYIVT-EYMSKGSLLDFL---KSGEGKKLRLPQLVDMAAQI 112

Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
           A  +AYL     R  ++RD    +IL  E  V K+ DF L+
Sbjct: 113 AEGMAYLE---SRNYIHRDLAARNILVGENLVCKIADFGLA 150

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 39.3 bits (92), Expect = 8e-04
 Identities = 24/101 (23%), Positives = 47/101 (46%), Gaps = 8/101 (7%)

Query: 112 AQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
           A + H H+++L+G CL +    L  + +  G L D +      +   +  ++ L   + I
Sbjct: 64  ASVDHPHVVRLLGICL-SSQVQLITQLMPLGCLLDYV---RNHKDN-IGSQYLLNWCVQI 118

Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
           A  ++YL     + +V+RD    ++L       K+ DF L+
Sbjct: 119 AKGMSYLE---EKRLVHRDLAARNVLVKTPQHVKITDFGLA 156

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 39.3 bits (92), Expect = 9e-04
 Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 8/103 (7%)

Query: 116 HDHILKLIGCC-LETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHA 174
           H  +++L   C LE PI I+  E ++YG+L +  L     +   L +   + +A  +A  
Sbjct: 60  HPKLIQLYAVCTLEEPIYIVT-ELMKYGSLLE-YLQGGAGRA--LKLPQLIDMAAQVASG 115

Query: 175 LAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE 217
           +AYL     +  ++RD    ++L  E N+ K+ DF L+  I E
Sbjct: 116 MAYLE---AQNYIHRDLAARNVLVGENNICKVADFGLARVIKE 155

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 38.9 bits (90), Expect = 0.001
 Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 7/99 (7%)

Query: 114 MSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAH 173
           + HD ++KL     + PI I+  E +  G+L D  L + +   +PL     +  +  IA 
Sbjct: 58  LQHDKLVKLHAVVTKEPIYIIT-EFMAKGSLLD-FLKSDEGSKQPL--PKLIDFSAQIAE 113

Query: 174 ALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
            +A++     R  ++RD + A+IL +   V K+ DF L+
Sbjct: 114 GMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLA 149

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 38.6 bits (90), Expect = 0.001
 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 2/47 (4%)

Query: 166 KIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
           KIA+ I  AL YLH      +++RD K +++L N     K+ DF +S
Sbjct: 107 KIAVSIVKALEYLHSKLS--VIHRDVKPSNVLINRNGQVKLCDFGIS 151

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 38.2 bits (89), Expect = 0.002
 Identities = 24/100 (24%), Positives = 41/100 (41%), Gaps = 13/100 (13%)

Query: 116 HDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEP---LLMKHRLKIAMDIA 172
           H +I+ L           +  E  + G L   +L   +  TEP    + +  L+      
Sbjct: 61  HPNIVGLYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLE------ 114

Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
            AL +LH      +++RD K  +IL   +   K+ DF +S
Sbjct: 115 -ALNFLHSHK---VIHRDLKAGNILLTLDGDVKLADFGVS 150

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 38.5 bits (90), Expect = 0.002
 Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 11/102 (10%)

Query: 113 QMSHDHILKLIGCCLET-PIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
           Q  H +I++L G   ++ P+ I+  E +E G+L D+ L  +  +     +   + +   I
Sbjct: 61  QFDHPNIIRLEGVVTKSRPVMIIT-EYMENGSL-DKFLRENDGKFTVGQL---VGMLRGI 115

Query: 172 AHALAYL-HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
           A  + YL    +    V+RD    +IL N   V K+ DF LS
Sbjct: 116 ASGMKYLSEMNY----VHRDLAARNILVNSNLVCKVSDFGLS 153

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 38.2 bits (89), Expect = 0.002
 Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 10/101 (9%)

Query: 113 QMSHDHILKLIGCCL-ETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
           ++ H +I++ +G    E  + I   E V  G+L  ++L       EP++  +  +I +  
Sbjct: 58  KLQHPNIVQYLGTEREEDNLYIF-LELVPGGSL-AKLLKKYGSFPEPVIRLYTRQILL-- 113

Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
              L YLH    R  V+RD K A+IL +   V K+ DF ++
Sbjct: 114 --GLEYLH---DRNTVHRDIKGANILVDTNGVVKLADFGMA 149

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 38.4 bits (89), Expect = 0.002
 Identities = 23/105 (21%), Positives = 52/105 (49%), Gaps = 8/105 (7%)

Query: 118 HILKLIGCCLETPIPILAFESVEYGNLRD-----RILSASQPQTEPLLMKHRLKIAMDIA 172
           H+++L+G   +    ++  E + +G+L+      R  + + P   P  ++  +++A +IA
Sbjct: 70  HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 129

Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE 217
             +AYL+    +  V+RD    + +   +   K+ DF ++  I E
Sbjct: 130 DGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 171

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 37.8 bits (88), Expect = 0.003
 Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 5/66 (7%)

Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
           Q+SH H++KL G C+     I+  E V++G L D  L     +   + +  +L +A  +A
Sbjct: 57  QLSHKHLVKLYGVCVRDE-NIMVEEYVKFGPL-DVFL---HREKNNVSLHWKLDVAKQLA 111

Query: 173 HALAYL 178
            AL YL
Sbjct: 112 SALHYL 117

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 37.1 bits (86), Expect = 0.004
 Identities = 27/100 (27%), Positives = 52/100 (52%), Gaps = 7/100 (7%)

Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
           Q+ H  +++L     + PI I+  E +E G+L D + +   P+   L +   + +A  IA
Sbjct: 57  QLQHPRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKT---PEGIKLTINKLIDMAAQIA 112

Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
             +A++     +  ++RD + A+IL +E    K+ DF L+
Sbjct: 113 EGMAFIE---RKNYIHRDLRAANILVSETLCCKIADFGLA 149

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 36.9 bits (86), Expect = 0.004
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 3/48 (6%)

Query: 174 ALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTS 221
            LAYLH      IV+RD K A+I  +   V K+ DF  ++ +    T+
Sbjct: 111 GLAYLH---SHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTT 155

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	241
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	100.0
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.98
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.98
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.97
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.97
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.97
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.97
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.97
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.97
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.97
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.97
KOG0578	550	consensus p21-activated serine/threonine protein k	99.97
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.97
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.97
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.97
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.97
KOG0605	550	consensus NDR and related serine/threonine kinases	99.97
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.97
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.97
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.97
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.97
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.97
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.97
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.97
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.97
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.97
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.96
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.96
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.96
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.96
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.96
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.96
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.96
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.96
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.96
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.96
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.96
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.96
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.96
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.96
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.96
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.96
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.96
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.96
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.96
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.96
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.96
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.96
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.96
KOG3653	534	consensus Transforming growth factor beta/activin	99.96
PTZ00267	478	NIMA-related protein kinase; Provisional	99.96
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.96
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.96
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.96
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.96
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.96
PHA02988	283	hypothetical protein; Provisional	99.96
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.96
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.96
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.96
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.96
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.96
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.96
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.96
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.96
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.96
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.96
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.96
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.96
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.96
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.96
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.96
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.96
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.96
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.96
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.96
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.96
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.96
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.96
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.96
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.96
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.96
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.96
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.96
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.96
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.96
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.96
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.96
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.96
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.96
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.96
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.95
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.95
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.95
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.95
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.95
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.95
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.95
PTZ00283	496	serine/threonine protein kinase; Provisional	99.95
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.95
PHA03212	391	serine/threonine kinase US3; Provisional	99.95
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.95
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.95
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.95
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.95
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.95
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.95
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.95
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.95
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.95
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.95
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.95
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.95
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.95
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.95
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.95
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.95
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.95
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.95
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.95
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.95
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.95
PTZ00036	440	glycogen synthase kinase; Provisional	99.95
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.95
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.95
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.95
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.95
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.95
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.95
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.95
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.95
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.95
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.95
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.95
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.95
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.95
KOG0589	426	consensus Serine/threonine protein kinase [General	99.95
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.95
KOG0610	459	consensus Putative serine/threonine protein kinase	99.95
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.95
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.95
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.95
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.95
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.95
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.95
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.95
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.95
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.95
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.95
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.95
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.95
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.95
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.95
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.95
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.95
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.95
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.95
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.95
PHA03211	461	serine/threonine kinase US3; Provisional	99.95
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.95
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.95
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.95
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.95
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.95
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.95
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.95
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.95
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.95
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.95
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.95
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.95
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.95
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.95
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.95
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.95
KOG0586	596	consensus Serine/threonine protein kinase [General	99.95
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.95
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.95
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.95
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.95
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.95
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.95
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.95
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.95
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.95
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.95
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.95
PHA03209	357	serine/threonine kinase US3; Provisional	99.95
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.95
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.95
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.95
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.95
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.95
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.95
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.95
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.95
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.95
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.95
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.95
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.95
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.95
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.95
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.95
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.95
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.95
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.95
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.95
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.95
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.95
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.94
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.94
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.94
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.94
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.94
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.94
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.94
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.94
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.94
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.94
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.94
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.94
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.94
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.94
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.94
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.94
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.94
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.94
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.94
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.94
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.94
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.94
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.94
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.94
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.94
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.94
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.94
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.94
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.94
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.94
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.94
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.94
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.94
PHA03207	392	serine/threonine kinase US3; Provisional	99.94
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.94
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.94
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.94
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.94
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.94
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.94
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.94
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.94
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.94
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.94
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.94
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.94
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.94
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.94
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.94
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.94
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.94
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.94
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.94
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.94
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.94
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.94
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.94
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.94
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.94
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.94
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.94
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.94
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.94
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.94
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.94
KOG0584	632	consensus Serine/threonine protein kinase [General	99.94
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.94
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.94
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.94
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.94
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.94
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.94
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.94
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.94
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.94
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.94
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.94
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.94
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.94
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.94
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.94
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.94
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.94
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.94
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.93
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.93
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.93
PHA03210	501	serine/threonine kinase US3; Provisional	99.93
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.93
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.93
PLN00009	294	cyclin-dependent kinase A; Provisional	99.93
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.93
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.93
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.93
PRK09188	365	serine/threonine protein kinase; Provisional	99.93
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.93
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.93
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.93
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.93
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.93
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.93
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.93
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.93
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.93
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.93
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.93
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.93
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.93
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.93
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.93
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.93
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.93
PTZ00284	467	protein kinase; Provisional	99.93
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.93
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.93
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.93
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.93
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.93
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.93
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.93
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.93
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.93
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.93
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.93
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.93
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.93
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.92
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.92
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.92
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.92
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.92
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.92
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.92
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.92
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.92
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.92
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.92
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.92
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.92
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.92
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.92
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.92
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.92
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.92
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.92
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.92
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.92
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.92
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.92
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.92
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.92
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.92
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.92
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.92
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.91
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.91
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.91
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.91
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.91
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.91
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.91
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.91
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.9
PHA02882	294	putative serine/threonine kinase; Provisional	99.9
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.9
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.9
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.89
KOG1152	772	consensus Signal transduction serine/threonine kin	99.89
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.89
PRK10345	210	hypothetical protein; Provisional	99.88
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.88
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.88
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.88
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.87
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.87
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.87
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.87
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.86
PRK14879	211	serine/threonine protein kinase; Provisional	99.86
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.85
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.85
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.85
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.85
smart00090	237	RIO RIO-like kinase.	99.85
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.85
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.85
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.84
PRK12274	218	serine/threonine protein kinase; Provisional	99.84
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.83
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.83
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.81
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.79
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.78
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.78
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.77
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.77
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.77
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.76
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.71
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.68
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.64
PLN00181	793	protein SPA1-RELATED; Provisional	99.63
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.55
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.54
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.52
KOG3087	229	consensus Serine/threonine protein kinase [General	99.5
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	99.47
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.47
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.41
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	99.39
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	99.36
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.36
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.32
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	99.32
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.32
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.31
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	99.27
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.11
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	99.1
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.09
KOG1243	690	consensus Protein kinase [General function predict	99.04
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.03
COG0478	304	RIO-like serine/threonine protein kinase fused to	99.02
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	99.01
PRK09902	216	hypothetical protein; Provisional	98.95
COG0661	517	AarF Predicted unusual protein kinase [General fun	98.92
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	98.9
KOG0606	1205	consensus Microtubule-associated serine/threonine	98.73
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	98.73
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	98.72
KOG1235	538	consensus Predicted unusual protein kinase [Genera	98.64
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	98.63
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	98.62
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	98.59
PF01636	239	APH: Phosphotransferase enzyme family This family	98.57
KOG1266	458	consensus Protein kinase [Signal transduction mech	98.56
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	98.56
PLN02876	822	acyl-CoA dehydrogenase	98.4
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	98.39
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	98.37
PRK10593	297	hypothetical protein; Provisional	98.14
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	98.09
PRK09550	401	mtnK methylthioribose kinase; Reviewed	98.08
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	98.04
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	98.02
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	98.01
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	97.93
PRK05231	319	homoserine kinase; Provisional	97.84
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	97.72
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	97.56
PLN02756	418	S-methyl-5-thioribose kinase	97.56
KOG0606	1205	consensus Microtubule-associated serine/threonine	97.55
KOG2268	465	consensus Serine/threonine protein kinase [Signal	97.46
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	97.46
KOG2270	520	consensus Serine/threonine protein kinase involved	97.36
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	97.35
PLN02236	344	choline kinase	97.27
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	97.17
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	97.1
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	97.04
PRK12396	409	5-methylribose kinase; Reviewed	97.03
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	96.88
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	96.86
KOG0576	829	consensus Mitogen-activated protein kinase kinase	96.77
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	96.68
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	96.53
KOG2137	700	consensus Protein kinase [Signal transduction mech	96.43
PRK11768	325	serine/threonine protein kinase; Provisional	96.15
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	95.8
KOG1236	565	consensus Predicted unusual protein kinase [Genera	95.71
PTZ00384	383	choline kinase; Provisional	95.63
PF05445	434	Pox_ser-thr_kin: Poxvirus serine/threonine protein	94.9
COG3001	286	Uncharacterized protein conserved in bacteria [Fun	94.8
PF04655	253	APH_6_hur: Aminoglycoside/hydroxyurea antibiotic r	94.7
PRK10271	188	thiK thiamine kinase; Provisional	94.53
PTZ00296	442	choline kinase; Provisional	94.05
COG2334	331	Putative homoserine kinase type II (protein kinase	94.01
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	93.69

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.8e-41  Score=289.27  Aligned_cols=185  Identities=35%  Similarity=0.533  Sum_probs=161.3

Q ss_pred             CccccCHHHHHHHhcCCCcCCeeecccceEEEEEEE-CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEE
Q 026214           48 PYRIFSAQELKLATNNYDQKNVITEDWGCILYKGFW-QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCC  126 (241)
Q Consensus        48 ~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~  126 (241)
                      +.+.|++.++..+|++|...+.||+|+||.||+|.. ++..||||++.........+|.+|+.++.+++|||+|+|+|||
T Consensus        61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC  140 (361)
T KOG1187|consen   61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC  140 (361)
T ss_pred             CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence            678899999999999999999999999999999999 6689999988775532155699999999999999999999999


Q ss_pred             ecCC-cceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEE
Q 026214          127 LETP-IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAK  205 (241)
Q Consensus       127 ~~~~-~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~k  205 (241)
                      .+.+ ..+||+|||++|||.+++.....  . +++|..+++|+.++|.||.|||..+..+||||||||+|||+|+++++|
T Consensus       141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~--~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aK  217 (361)
T KOG1187|consen  141 LEGGEHRLLVYEYMPNGSLEDHLHGKKG--E-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAK  217 (361)
T ss_pred             ecCCceEEEEEEccCCCCHHHHhCCCCC--C-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEE
Confidence            9998 49999999999999999988632  1 899999999999999999999987777899999999999999999999


Q ss_pred             EccccCceecCC-CCccccceeecCCceeeeecC
Q 026214          206 MFDFSLSISIPE-GGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       206 i~DfG~a~~~~~-~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |+|||+|+..+. .....+..   .++..|.+||
T Consensus       218 lsDFGLa~~~~~~~~~~~~~~---~gt~gY~~PE  248 (361)
T KOG1187|consen  218 LSDFGLAKLGPEGDTSVSTTV---MGTFGYLAPE  248 (361)
T ss_pred             ccCccCcccCCccccceeeec---CCCCccCChh
Confidence            999999976655 32222211   5666688888

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=2e-38  Score=263.84  Aligned_cols=166  Identities=21%  Similarity=0.314  Sum_probs=146.6

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeecc--CCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRES--NRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      .++|.....||.|+||+||+|.+  ++..||||.+...  .....+.+..|+.+|+.++|||||.+++++.+++.+||||
T Consensus         9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM   88 (429)
T KOG0595|consen    9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM   88 (429)
T ss_pred             cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence            46688888899999999999999  7899999999876  3445566899999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCC------CcEEEcccc
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEE------NVAKMFDFS  210 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~------~~~ki~DfG  210 (241)
                      |||.||+|.+++...     +.+++.++..++.|++.||.+||   +++||||||||+||||+..      -.+||+|||
T Consensus        89 EyC~gGDLs~yi~~~-----~~l~e~t~r~Fm~QLA~alq~L~---~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFG  160 (429)
T KOG0595|consen   89 EYCNGGDLSDYIRRR-----GRLPEATARHFMQQLASALQFLH---ENNIIHRDLKPQNILLSTTARNDTSPVLKIADFG  160 (429)
T ss_pred             EeCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCcceEEeccCCCCCCCceEEecccc
Confidence            999999999999665     45999999999999999999999   9999999999999999765      569999999


Q ss_pred             CceecCCCCccccceeecCCceeeeecC
Q 026214          211 LSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       211 ~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +|+.+.+..-..+    -.+.+.|||||
T Consensus       161 fAR~L~~~~~a~t----lcGSplYMAPE  184 (429)
T KOG0595|consen  161 FARFLQPGSMAET----LCGSPLYMAPE  184 (429)
T ss_pred             hhhhCCchhHHHH----hhCCccccCHH
Confidence            9999986644433    33566888988

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=8e-36  Score=253.80  Aligned_cols=166  Identities=20%  Similarity=0.232  Sum_probs=144.5

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEecC--CcceEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLET--PIPILA  135 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv  135 (241)
                      +.|...++||+|+||.||+|.+  ++..||+|++..+.  .....-..+||.+|++|+||||++|.+...+.  ..+|||
T Consensus       117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlV  196 (560)
T KOG0600|consen  117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLV  196 (560)
T ss_pred             HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEE
Confidence            4567778999999999999999  89999999988764  34456678999999999999999999998876  689999


Q ss_pred             EeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceec
Q 026214          136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI  215 (241)
Q Consensus       136 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~  215 (241)
                      ||||++ +|.-++...    .-.+++..+..++.|++.||.|||   ..+|+|||||.+|||||.+|.+||+|||||+++
T Consensus       197 FeYMdh-DL~GLl~~p----~vkft~~qIKc~mkQLl~Gl~~cH---~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y  268 (560)
T KOG0600|consen  197 FEYMDH-DLSGLLSSP----GVKFTEPQIKCYMKQLLEGLEYCH---SRGVLHRDIKGSNILIDNNGVLKIADFGLARFY  268 (560)
T ss_pred             Eecccc-hhhhhhcCC----CcccChHHHHHHHHHHHHHHHHHh---hcCeeeccccccceEEcCCCCEEeccccceeec
Confidence            999985 999998554    446999999999999999999999   999999999999999999999999999999999


Q ss_pred             CCCCcc-ccceeecCCceeeeecC
Q 026214          216 PEGGTS-GAKCLKSERTEICCVRE  238 (241)
Q Consensus       216 ~~~~~~-~~~~~~~~~~~~~~~~e  238 (241)
                      .+.... .+.++   .|-||.+||
T Consensus       269 ~~~~~~~~T~rV---vTLWYRpPE  289 (560)
T KOG0600|consen  269 TPSGSAPYTSRV---VTLWYRPPE  289 (560)
T ss_pred             cCCCCcccccce---EEeeccChH
Confidence            877654 22222   356888887

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=100.00  E-value=1.2e-35  Score=235.23  Aligned_cols=165  Identities=19%  Similarity=0.210  Sum_probs=148.5

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCc--chhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRD--GHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      .|...++||+|.||.||+|.+  +|+.||||+++.....  -....++|+..|+.++|+||+.++++|...+...||+||
T Consensus         3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEf   82 (318)
T KOG0659|consen    3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEF   82 (318)
T ss_pred             hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEe
Confidence            467788999999999999999  8999999999865422  245689999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      |+ .+|+..+...    ...+++..+..++.+++.||+|||   .+.|+||||||.|+||+.+|.+||+|||+|+.+.++
T Consensus        83 m~-tdLe~vIkd~----~i~l~pa~iK~y~~m~LkGl~y~H---~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p  154 (318)
T KOG0659|consen   83 MP-TDLEVVIKDK----NIILSPADIKSYMLMTLKGLAYCH---SKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSP  154 (318)
T ss_pred             cc-ccHHHHhccc----ccccCHHHHHHHHHHHHHHHHHHH---hhhhhcccCCccceEEcCCCcEEeecccchhccCCC
Confidence            98 5999999776    567999999999999999999999   999999999999999999999999999999999888


Q ss_pred             CccccceeecCCceeeeecC
Q 026214          219 GTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ....+..   -.+.||.|||
T Consensus       155 ~~~~~~~---V~TRWYRAPE  171 (318)
T KOG0659|consen  155 NRIQTHQ---VVTRWYRAPE  171 (318)
T ss_pred             Ccccccc---eeeeeccChH
Confidence            7665544   5677999998

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-35  Score=244.35  Aligned_cols=163  Identities=18%  Similarity=0.188  Sum_probs=143.1

Q ss_pred             CcCCeeecccceEEEEEEE--CCeEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCc-ceEEEeeCC
Q 026214           65 DQKNVITEDWGCILYKGFW--QERLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPI-PILAFESVE  140 (241)
Q Consensus        65 ~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~lv~e~~~  140 (241)
                      .....||+|..|+||++.+  ++..+|+|.+.... ....+++.+|+++++..+|||||.++|.|+.... ..++||||+
T Consensus        82 e~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMD  161 (364)
T KOG0581|consen   82 ERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMD  161 (364)
T ss_pred             hhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcC
Confidence            3467899999999999999  89999999996543 3345789999999999999999999999999994 999999999


Q ss_pred             CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCc
Q 026214          141 YGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGT  220 (241)
Q Consensus       141 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~  220 (241)
                      +|||++++...     +.+++.....++.+|+.||.|||.  +.+||||||||+|||++..|.+||||||.++.+...  
T Consensus       162 gGSLd~~~k~~-----g~i~E~~L~~ia~~VL~GL~YLh~--~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS--  232 (364)
T KOG0581|consen  162 GGSLDDILKRV-----GRIPEPVLGKIARAVLRGLSYLHE--ERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS--  232 (364)
T ss_pred             CCCHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHhh--ccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh--
Confidence            99999999654     459999999999999999999993  389999999999999999999999999999977554  


Q ss_pred             cccceeecCCceeeeecCC
Q 026214          221 SGAKCLKSERTEICCVREN  239 (241)
Q Consensus       221 ~~~~~~~~~~~~~~~~~e~  239 (241)
                         .+-.-.+|..||+||+
T Consensus       233 ---~a~tfvGT~~YMsPER  248 (364)
T KOG0581|consen  233 ---IANTFVGTSAYMSPER  248 (364)
T ss_pred             ---hcccccccccccChhh
Confidence               3344556778999996

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=5.1e-35  Score=249.52  Aligned_cols=165  Identities=25%  Similarity=0.353  Sum_probs=141.6

Q ss_pred             CcCCeeecccceEEEEEEECCeE-EEEEEeeccCCcc--hhhHHHHHHHHHhcCCCceeeEeeEEecCC-cceEEEeeCC
Q 026214           65 DQKNVITEDWGCILYKGFWQERL-ISVMRFRESNRDG--HGSCINNIVYAAQMSHDHILKLIGCCLETP-IPILAFESVE  140 (241)
Q Consensus        65 ~~~~~lg~G~~g~Vy~~~~~~~~-vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e~~~  140 (241)
                      ...+.||.|+||+||+|.+.+.. ||+|++.......  .+.|.+|+.+|.+++|||||+++|+|.++. ...+||||++
T Consensus        44 ~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~  123 (362)
T KOG0192|consen   44 PIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMP  123 (362)
T ss_pred             hhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCC
Confidence            34556999999999999998887 9999998754222  458999999999999999999999999887 7999999999


Q ss_pred             CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCC-eEEccCCCCCeeEcCCC-cEEEccccCceecCCC
Q 026214          141 YGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRP-IVYRDFKTAHILFNEEN-VAKMFDFSLSISIPEG  218 (241)
Q Consensus       141 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~-ivH~dlk~~Nill~~~~-~~ki~DfG~a~~~~~~  218 (241)
                      +|+|.+++...   ....+++..++.++.||+.||.|||   +.+ ||||||||+|||++.++ ++||+|||+++.....
T Consensus       124 ~GsL~~~l~~~---~~~~l~~~~~l~~aldiArGm~YLH---~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~  197 (362)
T KOG0192|consen  124 GGSLSVLLHKK---RKRKLPLKVRLRIALDIARGMEYLH---SEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVIS  197 (362)
T ss_pred             CCcHHHHHhhc---ccCCCCHHHHHHHHHHHHHHHHHHh---cCCCeeecccChhhEEEcCCCCEEEECCCccceeeccc
Confidence            99999999774   3567999999999999999999999   888 99999999999999998 9999999999877653


Q ss_pred             CccccceeecCCceeeeecC
Q 026214          219 GTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ....+   ...+|..|+|||
T Consensus       198 ~~~~~---~~~GT~~wMAPE  214 (362)
T KOG0192|consen  198 KTSMT---SVAGTYRWMAPE  214 (362)
T ss_pred             ccccc---CCCCCccccChh
Confidence            21111   145567889998

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=2.8e-36  Score=242.82  Aligned_cols=165  Identities=18%  Similarity=0.238  Sum_probs=144.0

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      .|+...++|+|+||+||+|.+  +|+.||||+|....  +.-.+-.++|+++|++++|+|+|.++.+|......+|||||
T Consensus         3 kYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~   82 (396)
T KOG0593|consen    3 KYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEY   82 (396)
T ss_pred             HHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeee
Confidence            466778999999999999999  99999999997653  22335689999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      |+. ++.+.+...    +..++...+..++.|++.|+.|+|   ++++|||||||+||||+.++.+|+||||+|+.+..+
T Consensus        83 ~dh-TvL~eLe~~----p~G~~~~~vk~~l~Q~l~ai~~cH---k~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~p  154 (396)
T KOG0593|consen   83 CDH-TVLHELERY----PNGVPSELVKKYLYQLLKAIHFCH---KNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAP  154 (396)
T ss_pred             cch-HHHHHHHhc----cCCCCHHHHHHHHHHHHHHhhhhh---hcCeecccCChhheEEecCCcEEeccchhhHhhcCC
Confidence            986 666666554    455899999999999999999999   999999999999999999999999999999999866


Q ss_pred             CccccceeecCCceeeeecC
Q 026214          219 GTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +...+   .+-+|.||.+||
T Consensus       155 gd~YT---DYVATRWYRaPE  171 (396)
T KOG0593|consen  155 GDNYT---DYVATRWYRAPE  171 (396)
T ss_pred             cchhh---hhhhhhhccChh
Confidence            55444   455678999998

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3.5e-35  Score=244.65  Aligned_cols=166  Identities=20%  Similarity=0.274  Sum_probs=143.0

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcc-------hhhHHHHHHHHHhcCCCceeeEeeEEecCCc
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDG-------HGSCINNIVYAAQMSHDHILKLIGCCLETPI  131 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  131 (241)
                      .+.|...+.||+|+||.|-+|+.  ++..||||++.+.....       .....+|+++|++|+|||||++.+++..++.
T Consensus       171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds  250 (475)
T KOG0615|consen  171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDS  250 (475)
T ss_pred             cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCc
Confidence            35567789999999999999998  99999999997643221       1234699999999999999999999999999


Q ss_pred             ceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCC---CcEEEcc
Q 026214          132 PILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEE---NVAKMFD  208 (241)
Q Consensus       132 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~---~~~ki~D  208 (241)
                      .|+||||+.||+|.+++...     +.+.+.....++.|++.|+.|||   +.||+||||||+|||+..+   ..+||+|
T Consensus       251 ~YmVlE~v~GGeLfd~vv~n-----k~l~ed~~K~~f~Qll~avkYLH---~~GI~HRDiKPeNILl~~~~e~~llKItD  322 (475)
T KOG0615|consen  251 SYMVLEYVEGGELFDKVVAN-----KYLREDLGKLLFKQLLTAVKYLH---SQGIIHRDIKPENILLSNDAEDCLLKITD  322 (475)
T ss_pred             eEEEEEEecCccHHHHHHhc-----cccccchhHHHHHHHHHHHHHHH---HcCcccccCCcceEEeccCCcceEEEecc
Confidence            99999999999999999665     45888888899999999999999   9999999999999999655   8899999


Q ss_pred             ccCceecCCCCccccceeecCCceeeeecC
Q 026214          209 FSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       209 fG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ||+|+..+...-..+.|    +|..|.|||
T Consensus       323 FGlAK~~g~~sfm~TlC----GTpsYvAPE  348 (475)
T KOG0615|consen  323 FGLAKVSGEGSFMKTLC----GTPSYVAPE  348 (475)
T ss_pred             cchhhccccceehhhhc----CCccccChh
Confidence            99999988665555444    456788887

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.1e-34  Score=251.78  Aligned_cols=166  Identities=18%  Similarity=0.230  Sum_probs=148.3

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeecc---CCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRES---NRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      ..|...+.||+|+|+.||.+.+  +|..||+|++.+.   +....+...+||++.+.|+|||||+++++|++.++.|+|.
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL   97 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL   97 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence            4588899999999999999998  8999999999874   3345677999999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      |+|..++|..++..     ..++++..+..++.||+.||.|||   +.+|+|||||..|++|+++.++||+|||||..+.
T Consensus        98 ELC~~~sL~el~Kr-----rk~ltEpEary~l~QIv~GlkYLH---~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le  169 (592)
T KOG0575|consen   98 ELCHRGSLMELLKR-----RKPLTEPEARYFLRQIVEGLKYLH---SLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLE  169 (592)
T ss_pred             EecCCccHHHHHHh-----cCCCCcHHHHHHHHHHHHHHHHHH---hcCceecccchhheeecCcCcEEecccceeeeec
Confidence            99999999999953     577999999999999999999999   9999999999999999999999999999999998


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .++...-   +-.+|+.|.|||
T Consensus       170 ~~~Erk~---TlCGTPNYIAPE  188 (592)
T KOG0575|consen  170 YDGERKK---TLCGTPNYIAPE  188 (592)
T ss_pred             Ccccccc---eecCCCcccChh
Confidence            7743322   233566788887

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.9e-33  Score=241.08  Aligned_cols=171  Identities=19%  Similarity=0.279  Sum_probs=146.0

Q ss_pred             HHhcCCCcCCeeecccceEEEEEEECCe-EEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEe
Q 026214           59 LATNNYDQKNVITEDWGCILYKGFWQER-LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFE  137 (241)
Q Consensus        59 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~-~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  137 (241)
                      .....+...+.||+|-||.||.|.+++. .||+|.+.... ...+.|.+|+.+|.+|+|+|||+++|+|..++.+++|||
T Consensus       203 i~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE  281 (468)
T KOG0197|consen  203 IPREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTE  281 (468)
T ss_pred             ecHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEE
Confidence            3333444567899999999999999665 89999998764 456789999999999999999999999999889999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCC
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE  217 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~  217 (241)
                      ||+.|+|.++|...   ....+.....+.++.|||+||+||+   ++++|||||.++|||++++..+||+|||+|+.+..
T Consensus       282 ~m~~GsLl~yLr~~---~~~~l~~~~Ll~~a~qIaeGM~YLe---s~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d  355 (468)
T KOG0197|consen  282 YMPKGSLLDYLRTR---EGGLLNLPQLLDFAAQIAEGMAYLE---SKNYIHRDLAARNILVDEDLVVKISDFGLARLIGD  355 (468)
T ss_pred             ecccCcHHHHhhhc---CCCccchHHHHHHHHHHHHHHHHHH---hCCccchhhhhhheeeccCceEEEcccccccccCC
Confidence            99999999999874   3566899999999999999999999   99999999999999999999999999999994444


Q ss_pred             CCccccceeecCCceeeeecC
Q 026214          218 GGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +  ..+..-.+..+-.|.|||
T Consensus       356 ~--~Y~~~~~~kfPIkWtAPE  374 (468)
T KOG0197|consen  356 D--EYTASEGGKFPIKWTAPE  374 (468)
T ss_pred             C--ceeecCCCCCCceecCHH
Confidence            3  233334455555667777

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-33  Score=232.45  Aligned_cols=168  Identities=18%  Similarity=0.211  Sum_probs=147.0

Q ss_pred             HhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC---cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceE
Q 026214           60 ATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR---DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPIL  134 (241)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  134 (241)
                      ..+.|...++||+|+||.||.+..  +++.+|+|.+++...   ...+....|..+|.+++||.||.+...|++.+.+||
T Consensus        23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl  102 (357)
T KOG0598|consen   23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL  102 (357)
T ss_pred             ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence            346688999999999999999998  899999999987532   345678899999999999999999999999999999


Q ss_pred             EEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCcee
Q 026214          135 AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSIS  214 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~  214 (241)
                      |+||+.||.|...|.++     +.+++..+..++..|+.||.|||   +.+||||||||+|||||..|+++|+|||+|+.
T Consensus       103 Vld~~~GGeLf~hL~~e-----g~F~E~~arfYlaEi~lAL~~LH---~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~  174 (357)
T KOG0598|consen  103 VLDYLNGGELFYHLQRE-----GRFSEDRARFYLAEIVLALGYLH---SKGIIYRDLKPENILLDEQGHIKLTDFGLCKE  174 (357)
T ss_pred             EEeccCCccHHHHHHhc-----CCcchhHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHeeecCCCcEEEeccccchh
Confidence            99999999999999655     45999999999999999999999   99999999999999999999999999999996


Q ss_pred             cCCCCccccceeecCCceeeeecC
Q 026214          215 IPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .-.++....+   -.+|.-|+|||
T Consensus       175 ~~~~~~~t~t---fcGT~eYmAPE  195 (357)
T KOG0598|consen  175 DLKDGDATRT---FCGTPEYMAPE  195 (357)
T ss_pred             cccCCCcccc---ccCCccccChH
Confidence            6555433322   34566789998

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.7e-34  Score=242.16  Aligned_cols=165  Identities=18%  Similarity=0.207  Sum_probs=143.4

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcch-hhHHHHHHHHHhcC-CCceeeEeeEEecCC-cceEEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGH-GSCINNIVYAAQMS-HDHILKLIGCCLETP-IPILAF  136 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~-~~~~~E~~~l~~l~-h~niv~l~~~~~~~~-~~~lv~  136 (241)
                      +.|...++||.|+||.||+|..  ++..||||+++..-.... ---+||+..|++|+ ||||+++..++.+.+ .+++||
T Consensus        10 ~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVf   89 (538)
T KOG0661|consen   10 DRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVF   89 (538)
T ss_pred             HHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeH
Confidence            4567778999999999999998  888999999887543221 22378999999998 999999999999887 999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      |||+ .+|++++...    ...+++..+..|++||+.||+|+|   .+|+.|||+||+|||+.....+||+|||+|+.+.
T Consensus        90 E~Md-~NLYqLmK~R----~r~fse~~irnim~QilqGL~hiH---k~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~  161 (538)
T KOG0661|consen   90 EFMD-CNLYQLMKDR----NRLFSESDIRNIMYQILQGLAHIH---KHGFFHRDLKPENILISGNDVIKIADFGLAREVR  161 (538)
T ss_pred             Hhhh-hhHHHHHhhc----CCcCCHHHHHHHHHHHHHHHHHHH---hcCcccccCChhheEecccceeEecccccccccc
Confidence            9998 6999999876    567999999999999999999999   9999999999999999989999999999999887


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +....+    .+-.|.||.|||
T Consensus       162 SkpPYT----eYVSTRWYRAPE  179 (538)
T KOG0661|consen  162 SKPPYT----EYVSTRWYRAPE  179 (538)
T ss_pred             cCCCcc----hhhhcccccchH
Confidence            655444    344567899998

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=100.00  E-value=6.5e-33  Score=225.89  Aligned_cols=166  Identities=17%  Similarity=0.244  Sum_probs=141.9

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCc--chhhHHHHHHHHHhcCCCceeeEeeEEecC--CcceEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRD--GHGSCINNIVYAAQMSHDHILKLIGCCLET--PIPILA  135 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv  135 (241)
                      +.|...+.|++|+||.||+|.+  ++..||+|+++-+...  ..=..++||.+|.+++|||||.+..+....  +..|+|
T Consensus        76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V  155 (419)
T KOG0663|consen   76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV  155 (419)
T ss_pred             HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence            4466688999999999999999  8999999999765422  223468999999999999999998887654  479999


Q ss_pred             EeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceec
Q 026214          136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI  215 (241)
Q Consensus       136 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~  215 (241)
                      ||||++ +|..++...    .+++....+..++.|++.|+.|||   .+.|+||||||+|+|+++.|.+||+|||+|+.+
T Consensus       156 Me~~Eh-DLksl~d~m----~q~F~~~evK~L~~QlL~glk~lH---~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~y  227 (419)
T KOG0663|consen  156 MEYVEH-DLKSLMETM----KQPFLPGEVKTLMLQLLRGLKHLH---DNWILHRDLKTSNLLLSHKGILKIADFGLAREY  227 (419)
T ss_pred             HHHHHh-hHHHHHHhc----cCCCchHHHHHHHHHHHHHHHHHh---hceeEecccchhheeeccCCcEEecccchhhhh
Confidence            999985 999999776    467999999999999999999999   999999999999999999999999999999999


Q ss_pred             CCCCccccceeecCCceeeeecC
Q 026214          216 PEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +++-...+..++   |-||.|||
T Consensus       228 gsp~k~~T~lVV---TLWYRaPE  247 (419)
T KOG0663|consen  228 GSPLKPYTPLVV---TLWYRAPE  247 (419)
T ss_pred             cCCcccCcceEE---EeeecCHH
Confidence            988554443332   56788887

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=6.4e-32  Score=224.78  Aligned_cols=170  Identities=22%  Similarity=0.232  Sum_probs=144.1

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCC--cceEEEe
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETP--IPILAFE  137 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv~e  137 (241)
                      .++...+.||+|+||.||.+.+  ++...|||.+........+.+.+|+.+|.+++|||||+++|......  .+++.||
T Consensus        17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE   96 (313)
T KOG0198|consen   17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME   96 (313)
T ss_pred             chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence            4466688999999999999999  57999999987654333677899999999999999999999855544  6899999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcC-CCcEEEccccCceecC
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNE-ENVAKMFDFSLSISIP  216 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~-~~~~ki~DfG~a~~~~  216 (241)
                      |+++|||.+++...+   . .+++..+..++.|++.||.|||   ++++||+||||+|||++. ++.+||+|||++....
T Consensus        97 y~~~GsL~~~~~~~g---~-~l~E~~v~~ytr~iL~GL~ylH---s~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~  169 (313)
T KOG0198|consen   97 YAPGGSLSDLIKRYG---G-KLPEPLVRRYTRQILEGLAYLH---SKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLE  169 (313)
T ss_pred             ccCCCcHHHHHHHcC---C-CCCHHHHHHHHHHHHHHHHHHH---hCCEeccCcccceEEEeCCCCeEEeccCccccccc
Confidence            999999999997762   2 6999999999999999999999   999999999999999999 7999999999999887


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ...........-.+++.|++||
T Consensus       170 ~~~~~~~~~~~~~Gtp~~maPE  191 (313)
T KOG0198|consen  170 SKGTKSDSELSVQGTPNYMAPE  191 (313)
T ss_pred             cccccccccccccCCccccCch
Confidence            5333333333445567888888

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.98  E-value=8e-32  Score=221.58  Aligned_cols=168  Identities=20%  Similarity=0.250  Sum_probs=140.5

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC--cchhhHHHHHHHHHhcCCCc-eeeEeeEEecCC------c
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR--DGHGSCINNIVYAAQMSHDH-ILKLIGCCLETP------I  131 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~------~  131 (241)
                      .|...++||+|+||+||+|..  +|..||+|++.....  .......+|+.+++.++|+| |+.+++++.+.+      .
T Consensus        12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~   91 (323)
T KOG0594|consen   12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGK   91 (323)
T ss_pred             HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccce
Confidence            355566799999999999999  899999999886543  24566899999999999999 999999999877      7


Q ss_pred             ceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccC
Q 026214          132 PILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL  211 (241)
Q Consensus       132 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~  211 (241)
                      .++||||+. -+|..++....... ..++...+..++.|++.||+|||   +.+|+||||||.||||++.|.+||+|||+
T Consensus        92 l~lvfe~~d-~DL~~ymd~~~~~~-~g~~~~~ik~~m~Qll~gl~~~H---~~~IlHRDLKPQNlLi~~~G~lKlaDFGl  166 (323)
T KOG0594|consen   92 LYLVFEFLD-RDLKKYMDSLPKKP-QGLPPRLIKSFMRQLLRGLAFLH---SHGILHRDLKPQNLLISSSGVLKLADFGL  166 (323)
T ss_pred             EEEEEEeec-ccHHHHHHhccccc-cCCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCcceEEECCCCcEeeeccch
Confidence            899999997 59999997763211 45777899999999999999999   99999999999999999999999999999


Q ss_pred             ceecCCCCccccceeecCCceeeeecC
Q 026214          212 SISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       212 a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |+.+.-+....+..   ..|-||+|||
T Consensus       167 Ara~~ip~~~yt~e---vvTlWYRaPE  190 (323)
T KOG0594|consen  167 ARAFSIPMRTYTPE---VVTLWYRAPE  190 (323)
T ss_pred             HHHhcCCccccccc---EEEeeccCHH
Confidence            99887554432222   1233588887

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.98  E-value=1.2e-31  Score=230.26  Aligned_cols=168  Identities=20%  Similarity=0.218  Sum_probs=144.1

Q ss_pred             HHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeecc----CC-cchhhHHHHHHHHHhcC-CCceeeEeeEEecCC
Q 026214           59 LATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRES----NR-DGHGSCINNIVYAAQMS-HDHILKLIGCCLETP  130 (241)
Q Consensus        59 ~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~----~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~  130 (241)
                      ...+.|...+.||+|+||.|+.|.+  ++..||+|.+...    .. ...+.+.+|+.+++.+. ||||++++.++....
T Consensus        14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~   93 (370)
T KOG0583|consen   14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT   93 (370)
T ss_pred             cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence            4557889999999999999999998  8899999976653    11 23455678999999998 999999999999999


Q ss_pred             cceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCC-CcEEEccc
Q 026214          131 IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEE-NVAKMFDF  209 (241)
Q Consensus       131 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~-~~~ki~Df  209 (241)
                      ..++||||+.+|+|.+.+...     +.+.+..+..++.|++.|+.|||   +.+|+||||||+|||++.+ +++||+||
T Consensus        94 ~~~ivmEy~~gGdL~~~i~~~-----g~l~E~~ar~~F~Qlisav~y~H---~~gi~HRDLK~ENilld~~~~~~Kl~DF  165 (370)
T KOG0583|consen   94 KIYIVMEYCSGGDLFDYIVNK-----GRLKEDEARKYFRQLISAVAYCH---SRGIVHRDLKPENILLDGNEGNLKLSDF  165 (370)
T ss_pred             eEEEEEEecCCccHHHHHHHc-----CCCChHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEecCCCCCEEEecc
Confidence            999999999999999999663     45888999999999999999999   9999999999999999999 99999999


Q ss_pred             cCceecC-CCCccccceeecCCceeeeecC
Q 026214          210 SLSISIP-EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       210 G~a~~~~-~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |++.... .++...    ...+++.|.|||
T Consensus       166 G~s~~~~~~~~~l~----t~cGsp~Y~aPE  191 (370)
T KOG0583|consen  166 GLSAISPGEDGLLK----TFCGSPAYAAPE  191 (370)
T ss_pred             ccccccCCCCCccc----CCCCCcccCCHH
Confidence            9999884 443333    344556677776

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=3.9e-32  Score=223.37  Aligned_cols=171  Identities=18%  Similarity=0.174  Sum_probs=148.8

Q ss_pred             HHHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEee--ccCCcchhhHHHHHHHHHhcCCCceeeEeeEEec-----
Q 026214           58 KLATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFR--ESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLE-----  128 (241)
Q Consensus        58 ~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~--~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-----  128 (241)
                      ......|...+.||.|+||.|+++.+  ++..||||++.  .......++.++|+.+++.++|+||+.+.+++..     
T Consensus        18 ~~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~   97 (359)
T KOG0660|consen   18 FEIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDK   97 (359)
T ss_pred             EeccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccc
Confidence            34455666678999999999999999  89999999987  3455567889999999999999999999999865     


Q ss_pred             CCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEcc
Q 026214          129 TPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFD  208 (241)
Q Consensus       129 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~D  208 (241)
                      -+..|+|+|+|+ .+|...+..+     ..++...+..+++|+++||.|+|   +.+++||||||+|++++.++.+||+|
T Consensus        98 f~DvYiV~elMe-tDL~~iik~~-----~~L~d~H~q~f~YQiLrgLKyiH---SAnViHRDLKPsNll~n~~c~lKI~D  168 (359)
T KOG0660|consen   98 FNDVYLVFELME-TDLHQIIKSQ-----QDLTDDHAQYFLYQILRGLKYIH---SANVIHRDLKPSNLLLNADCDLKICD  168 (359)
T ss_pred             cceeEEehhHHh-hHHHHHHHcC-----ccccHHHHHHHHHHHHHhcchhh---cccccccccchhheeeccCCCEEecc
Confidence            347899999996 6999999554     34999999999999999999999   99999999999999999999999999


Q ss_pred             ccCceecCCCCccccceeecCCceeeeecC
Q 026214          209 FSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       209 fG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ||+|+...+. +.....-.+-.|.||.|||
T Consensus       169 FGLAR~~~~~-~~~~~mTeYVaTRWYRAPE  197 (359)
T KOG0660|consen  169 FGLARYLDKF-FEDGFMTEYVATRWYRAPE  197 (359)
T ss_pred             ccceeecccc-CcccchhcceeeeeecCHH
Confidence            9999998776 4444555677888999998

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=2.8e-33  Score=223.53  Aligned_cols=173  Identities=21%  Similarity=0.257  Sum_probs=141.6

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEee-EEecCCc-ceEEE
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIG-CCLETPI-PILAF  136 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~-~~~~~~~-~~lv~  136 (241)
                      +|.+.++||.|+||.||++..  ++..||.|.++-+.  ....+.+..|+.+|++|+|||||++++ .+..++. .+++|
T Consensus        20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivm   99 (375)
T KOG0591|consen   20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVM   99 (375)
T ss_pred             HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHH
Confidence            366788999999999999998  99999999987543  334567899999999999999999998 4444444 89999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCC-CeEEccCCCCCeeEcCCCcEEEccccCceec
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPR-PIVYRDFKTAHILFNEENVAKMFDFSLSISI  215 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~-~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~  215 (241)
                      |+|.+|+|...+..... ...-+++..+++++.|++.||..+|..+.. -|+||||||.||+|+.+|.+|++|||+++.+
T Consensus       100 E~c~~GDLsqmIk~~K~-qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l  178 (375)
T KOG0591|consen  100 ELCDAGDLSQMIKHFKK-QKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL  178 (375)
T ss_pred             HhhcccCHHHHHHHHHh-ccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence            99999999999976532 466799999999999999999999942222 3899999999999999999999999999998


Q ss_pred             CCCCccccceeecCCceeeeecCC
Q 026214          216 PEGGTSGAKCLKSERTEICCVREN  239 (241)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~e~  239 (241)
                      .+..+-..   ..-+|+-|+-||.
T Consensus       179 ~s~~tfA~---S~VGTPyYMSPE~  199 (375)
T KOG0591|consen  179 SSKTTFAH---SLVGTPYYMSPER  199 (375)
T ss_pred             cchhHHHH---hhcCCCcccCHHH
Confidence            87654332   2234556777763

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.97  E-value=3.4e-31  Score=230.03  Aligned_cols=180  Identities=19%  Similarity=0.253  Sum_probs=149.3

Q ss_pred             ccccCHHHHHHHhcCCCcCCeeecccceEEEEEEE---CC---eEEEEEEeecc---CCcchhhHHHHHHHHHhcCCCce
Q 026214           49 YRIFSAQELKLATNNYDQKNVITEDWGCILYKGFW---QE---RLISVMRFRES---NRDGHGSCINNIVYAAQMSHDHI  119 (241)
Q Consensus        49 ~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~---~~---~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~ni  119 (241)
                      .+.+....|+....+....++||+|+||.||+|.+   ++   ..||+|.....   .......|++|.++++.++||||
T Consensus       144 ~~PI~r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NV  223 (474)
T KOG0194|consen  144 KRPIPRQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNV  223 (474)
T ss_pred             cccccccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCE
Confidence            34566677888888888889999999999999998   22   23899988752   23456789999999999999999


Q ss_pred             eeEeeEEecCCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEc
Q 026214          120 LKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFN  199 (241)
Q Consensus       120 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~  199 (241)
                      |+++|++.....+++|||+|+||+|.++|.+.    ...++....+.++.+.++||+|||   +++++||||-++|+|++
T Consensus       224 Vr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~----~~~v~~~ek~~~~~~AA~Gl~YLh---~k~~IHRDIAARNcL~~  296 (474)
T KOG0194|consen  224 VRFYGVAVLEEPLMLVMELCNGGSLDDYLKKN----KKSLPTLEKLRFCYDAARGLEYLH---SKNCIHRDIAARNCLYS  296 (474)
T ss_pred             EEEEEEEcCCCccEEEEEecCCCcHHHHHHhC----CCCCCHHHHHHHHHHHHhHHHHHH---HCCCcchhHhHHHheec
Confidence            99999999999999999999999999999876    336999999999999999999999   99999999999999999


Q ss_pred             CCCcEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          200 EENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       200 ~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .++.+||+|||+++.-..-....   .....+--|.|||
T Consensus       297 ~~~~vKISDFGLs~~~~~~~~~~---~~~klPirWLAPE  332 (474)
T KOG0194|consen  297 KKGVVKISDFGLSRAGSQYVMKK---FLKKLPIRWLAPE  332 (474)
T ss_pred             CCCeEEeCccccccCCcceeecc---ccccCcceecChh
Confidence            99999999999987543111111   1223444557777

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.97  E-value=4.5e-31  Score=212.06  Aligned_cols=162  Identities=18%  Similarity=0.188  Sum_probs=142.9

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEe
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFE  137 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  137 (241)
                      +|.....||.|+||.|..+..  ++..+|+|.+.+..   ....+...+|..+|+.+.||.++++.+.+.+.+..+||||
T Consensus        45 dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvme  124 (355)
T KOG0616|consen   45 DFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVME  124 (355)
T ss_pred             hhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEEe
Confidence            466788999999999999998  88999999998753   2344667899999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCC
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE  217 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~  217 (241)
                      |.+||.|..++.+.     +.+++..+..++.||+.||.|||   ++.|++|||||+|||||.+|.+||+|||+|+.+..
T Consensus       125 yv~GGElFS~Lrk~-----~rF~e~~arFYAAeivlAleylH---~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~  196 (355)
T KOG0616|consen  125 YVPGGELFSYLRKS-----GRFSEPHARFYAAEIVLALEYLH---SLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG  196 (355)
T ss_pred             ccCCccHHHHHHhc-----CCCCchhHHHHHHHHHHHHHHHH---hcCeeeccCChHHeeeccCCcEEEEeccceEEecC
Confidence            99999999999765     45999999999999999999999   99999999999999999999999999999998765


Q ss_pred             CCccccceeecCCceeeeecC
Q 026214          218 GGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .  +    .+-.+++-|+|||
T Consensus       197 r--T----~TlCGTPeYLAPE  211 (355)
T KOG0616|consen  197 R--T----WTLCGTPEYLAPE  211 (355)
T ss_pred             c--E----EEecCCccccChH
Confidence            4  2    2333556678887

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=8e-31  Score=220.59  Aligned_cols=176  Identities=18%  Similarity=0.215  Sum_probs=153.3

Q ss_pred             HHHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCc-chhhHHHHHHHHHhcCCCceeeEeeEEecCCcceE
Q 026214           58 KLATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRD-GHGSCINNIVYAAQMSHDHILKLIGCCLETPIPIL  134 (241)
Q Consensus        58 ~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  134 (241)
                      ......|...+.||.|..++||+|..  .+..||||++..+... ....+.+|+..++.++||||++++..|..+..+|+
T Consensus        22 p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWv  101 (516)
T KOG0582|consen   22 PLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWV  101 (516)
T ss_pred             CCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEE
Confidence            34456788999999999999999999  8899999999865433 35889999999999999999999999999999999


Q ss_pred             EEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCcee
Q 026214          135 AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSIS  214 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~  214 (241)
                      ||.||.+||+.+.+...   -+..+++..+..|+.+++.||.|||   .+|-||||||+.||||+.+|.+||+|||++..
T Consensus       102 VmpfMa~GS~ldIik~~---~~~Gl~E~~Ia~iLre~LkaL~YLH---~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~  175 (516)
T KOG0582|consen  102 VMPFMAGGSLLDIIKTY---YPDGLEEASIATILREVLKALDYLH---QNGHIHRDVKAGNILIDSDGTVKLADFGVSAS  175 (516)
T ss_pred             eehhhcCCcHHHHHHHH---ccccccHHHHHHHHHHHHHHHHHHH---hcCceecccccccEEEcCCCcEEEcCceeeee
Confidence            99999999999999876   3455999999999999999999999   99999999999999999999999999999887


Q ss_pred             cCCCCccccce-eecCCceeeeecCC
Q 026214          215 IPEGGTSGAKC-LKSERTEICCVREN  239 (241)
Q Consensus       215 ~~~~~~~~~~~-~~~~~~~~~~~~e~  239 (241)
                      +-..+...... -.-.++..|++||-
T Consensus       176 l~~~G~R~~~rf~tfvgtp~wmAPEv  201 (516)
T KOG0582|consen  176 LFDSGDRQVTRFNTFVGTPCWMAPEV  201 (516)
T ss_pred             ecccCceeeEeeccccCcccccChHH
Confidence            76555443333 34457778999984

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.97  E-value=4.6e-31  Score=226.54  Aligned_cols=153  Identities=19%  Similarity=0.191  Sum_probs=137.0

Q ss_pred             HHHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhc-CCCceeeEeeEEecCCc
Q 026214           58 KLATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQM-SHDHILKLIGCCLETPI  131 (241)
Q Consensus        58 ~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~  131 (241)
                      ....++|..++.||+|+|++|++|+.  +++.+|||++.+.-   ....+-.-+|-.+|.+| .||.|++|+..|+++..
T Consensus        69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s  148 (604)
T KOG0592|consen   69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES  148 (604)
T ss_pred             cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence            34557789999999999999999999  89999999987642   22334466788889999 89999999999999999


Q ss_pred             ceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccC
Q 026214          132 PILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL  211 (241)
Q Consensus       132 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~  211 (241)
                      +|+|+||+++|+|.++|.+.     +.+++.....++.+|+.||.|||   +.|||||||||+|||||.+++++|+|||.
T Consensus       149 LYFvLe~A~nGdll~~i~K~-----Gsfde~caR~YAAeIldAleylH---~~GIIHRDlKPENILLd~dmhikITDFGs  220 (604)
T KOG0592|consen  149 LYFVLEYAPNGDLLDLIKKY-----GSFDETCARFYAAEILDALEYLH---SNGIIHRDLKPENILLDKDGHIKITDFGS  220 (604)
T ss_pred             eEEEEEecCCCcHHHHHHHh-----CcchHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeEcCCCcEEEeeccc
Confidence            99999999999999999665     56999999999999999999999   99999999999999999999999999999


Q ss_pred             ceecCCC
Q 026214          212 SISIPEG  218 (241)
Q Consensus       212 a~~~~~~  218 (241)
                      |+.+++.
T Consensus       221 AK~l~~~  227 (604)
T KOG0592|consen  221 AKILSPS  227 (604)
T ss_pred             cccCChh
Confidence            9998654

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.97  E-value=1.4e-31  Score=220.44  Aligned_cols=164  Identities=17%  Similarity=0.225  Sum_probs=133.7

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCC-----cceE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETP-----IPIL  134 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~l  134 (241)
                      -.|...+++|.|+||.||+|..  ++..||||+...+...    --+|+.+|+.++|||||+|..+|....     ...|
T Consensus        24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~----knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnl   99 (364)
T KOG0658|consen   24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY----KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNL   99 (364)
T ss_pred             EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc----CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHH
Confidence            3466788999999999999999  7799999998776532    236899999999999999998886532     4568


Q ss_pred             EEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCC-CcEEEccccCce
Q 026214          135 AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEE-NVAKMFDFSLSI  213 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~-~~~ki~DfG~a~  213 (241)
                      |||||+ .||.+.+..... ....++.-.+.-++.|+++||.|||   +.+|+||||||+|+|+|.+ |.+||||||.|+
T Consensus       100 VleymP-~tL~~~~r~~~~-~~~~mp~~~iKLYt~Qlfrgl~yLh---~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK  174 (364)
T KOG0658|consen  100 VLEYMP-ETLYRVIRHYTR-ANQRMPLLEIKLYTYQLFRGLAYLH---SHGICHRDIKPQNLLVDPDTGVLKICDFGSAK  174 (364)
T ss_pred             HHHhch-HHHHHHHHHHhh-cCCCCceeeeHHHHHHHHHHHHHHH---hcCcccCCCChheEEEcCCCCeEEeccCCcce
Confidence            999998 599999975321 2445777788889999999999999   9999999999999999975 999999999999


Q ss_pred             ecCCCCccccceeecCCceeeeecC
Q 026214          214 SIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .+..++...    .+-.+.-|.|||
T Consensus       175 ~L~~~epni----SYicSRyYRaPE  195 (364)
T KOG0658|consen  175 VLVKGEPNI----SYICSRYYRAPE  195 (364)
T ss_pred             eeccCCCce----eEEEeccccCHH
Confidence            987765543    333444566776

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.97  E-value=1e-30  Score=221.45  Aligned_cols=174  Identities=19%  Similarity=0.233  Sum_probs=141.4

Q ss_pred             HHHHHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCc--------------chhhHHHHHHHHHhcCCCce
Q 026214           56 ELKLATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRD--------------GHGSCINNIVYAAQMSHDHI  119 (241)
Q Consensus        56 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~--------------~~~~~~~E~~~l~~l~h~ni  119 (241)
                      +-....+.|.....||.|.||.|-+|++  ++..||||++.+....              ..+...+||.+|++++||||
T Consensus        91 ~~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nV  170 (576)
T KOG0585|consen   91 QDRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNV  170 (576)
T ss_pred             ccceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCe
Confidence            3345668899999999999999999999  8899999998763210              12467899999999999999


Q ss_pred             eeEeeEEecC--CcceEEEeeCCCCCHHHHHhhcCCCCCCC-CCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCe
Q 026214          120 LKLIGCCLET--PIPILAFESVEYGNLRDRILSASQPQTEP-LLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHI  196 (241)
Q Consensus       120 v~l~~~~~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~~~~-l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Ni  196 (241)
                      |+|+.+..+.  +.+|||+|||..|.+...-      ...+ +++..+..|+.+++.||.|||   .++||||||||+|+
T Consensus       171 V~LiEvLDDP~s~~~YlVley~s~G~v~w~p------~d~~els~~~Ar~ylrDvv~GLEYLH---~QgiiHRDIKPsNL  241 (576)
T KOG0585|consen  171 VKLIEVLDDPESDKLYLVLEYCSKGEVKWCP------PDKPELSEQQARKYLRDVVLGLEYLH---YQGIIHRDIKPSNL  241 (576)
T ss_pred             eEEEEeecCcccCceEEEEEeccCCccccCC------CCcccccHHHHHHHHHHHHHHHHHHH---hcCeeccccchhhe
Confidence            9999999764  5799999999988775443      2334 899999999999999999999   99999999999999


Q ss_pred             eEcCCCcEEEccccCceecCCCCcc-c-cceeecCCceeeeecC
Q 026214          197 LFNEENVAKMFDFSLSISIPEGGTS-G-AKCLKSERTEICCVRE  238 (241)
Q Consensus       197 ll~~~~~~ki~DfG~a~~~~~~~~~-~-~~~~~~~~~~~~~~~e  238 (241)
                      ||+.+|++||+|||.+...+..... . .....-.+|+.++|||
T Consensus       242 Ll~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE  285 (576)
T KOG0585|consen  242 LLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPE  285 (576)
T ss_pred             EEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchH
Confidence            9999999999999999877433211 1 1111244666778887

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=5.4e-31  Score=227.22  Aligned_cols=166  Identities=20%  Similarity=0.285  Sum_probs=149.6

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      ...|..-.+||+|+.|.||.+..  ++..||||++....+...+-+++|+.+|+..+|+|||.+++.|...+.+|.||||
T Consensus       272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEy  351 (550)
T KOG0578|consen  272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEY  351 (550)
T ss_pred             hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEee
Confidence            35567778999999999999998  8889999999888766667789999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      |+||+|.+.+...      .+++..+..|+.+++.||.|||   ..+|+|||||.+|||++.+|.+||+|||+|..+...
T Consensus       352 m~ggsLTDvVt~~------~~~E~qIA~Icre~l~aL~fLH---~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~  422 (550)
T KOG0578|consen  352 MEGGSLTDVVTKT------RMTEGQIAAICREILQGLKFLH---ARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEE  422 (550)
T ss_pred             cCCCchhhhhhcc------cccHHHHHHHHHHHHHHHHHHH---hcceeeeccccceeEeccCCcEEEeeeeeeeccccc
Confidence            9999999999554      4899999999999999999999   999999999999999999999999999999999988


Q ss_pred             CccccceeecCCceeeeecC
Q 026214          219 GTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .+...+.+   +++-|+|||
T Consensus       423 ~~KR~TmV---GTPYWMAPE  439 (550)
T KOG0578|consen  423 QSKRSTMV---GTPYWMAPE  439 (550)
T ss_pred             cCcccccc---CCCCccchh
Confidence            87665544   344558998

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.97  E-value=3.2e-31  Score=228.52  Aligned_cols=165  Identities=19%  Similarity=0.247  Sum_probs=143.8

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEe
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFE  137 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  137 (241)
                      ++|..-+.||+|+||.||||+.  +...||+|.+.+..  ....+.+.+|+++++.++||||+.++++|+...+.|+|+|
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte   81 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE   81 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence            3566778999999999999988  88999999987653  3346778999999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCC
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE  217 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~  217 (241)
                      |+.| +|..++..     .+.+++..+..++.+++.||.|||   +++|+|||+||.|||++.++.+|+||||+|+....
T Consensus        82 ~a~g-~L~~il~~-----d~~lpEe~v~~~a~~LVsaL~yLh---s~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~  152 (808)
T KOG0597|consen   82 YAVG-DLFTILEQ-----DGKLPEEQVRAIAYDLVSALYYLH---SNRILHRDMKPQNILLEKGGTLKLCDFGLARAMST  152 (808)
T ss_pred             hhhh-hHHHHHHh-----ccCCCHHHHHHHHHHHHHHHHHHH---hcCcccccCCcceeeecCCCceeechhhhhhhccc
Confidence            9985 99999955     466999999999999999999999   99999999999999999999999999999998766


Q ss_pred             CCccccceeecCCceeeeecC
Q 026214          218 GGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +... .+.+  .+++.|+|||
T Consensus       153 ~t~v-ltsi--kGtPlYmAPE  170 (808)
T KOG0597|consen  153 NTSV-LTSI--KGTPLYMAPE  170 (808)
T ss_pred             Ccee-eeec--cCcccccCHH
Confidence            4322 2222  3566889998

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=2.9e-30  Score=222.56  Aligned_cols=147  Identities=14%  Similarity=0.172  Sum_probs=132.3

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      ++|...+.||.|+||.||+|.+  ++..||||.+....   ......+.+|+.++..++||||+++++++.+.+..++||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM   80 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence            3688889999999999999998  78999999997532   223455788999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||+++|+|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.++|+|||++..+.
T Consensus        81 E~~~~g~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~  152 (364)
T cd05599          81 EYLPGGDMMTLLMKK-----DTFTEEETRFYIAETILAIDSIH---KLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLK  152 (364)
T ss_pred             CCCCCcHHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEeecccceecc
Confidence            999999999999654     35899999999999999999999   9999999999999999999999999999998764

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.97  E-value=3.5e-30  Score=222.72  Aligned_cols=170  Identities=15%  Similarity=0.143  Sum_probs=142.9

Q ss_pred             HHHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcc
Q 026214           58 KLATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIP  132 (241)
Q Consensus        58 ~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  132 (241)
                      ....++|...+.||+|+||.||++.+  ++..+|+|.+....   ......+.+|+.+++.++||||+++++++..+...
T Consensus        39 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~  118 (370)
T cd05621          39 QMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYL  118 (370)
T ss_pred             CCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEE
Confidence            33456788899999999999999998  78899999987532   12345578899999999999999999999999999


Q ss_pred             eEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCc
Q 026214          133 ILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS  212 (241)
Q Consensus       133 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a  212 (241)
                      ++||||+++|+|.+++...      .+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+|
T Consensus       119 ~lv~Ey~~gg~L~~~l~~~------~~~~~~~~~~~~qil~aL~~LH---~~~IvHrDLKp~NILl~~~~~~kL~DFG~a  189 (370)
T cd05621         119 YMVMEYMPGGDLVNLMSNY------DVPEKWAKFYTAEVVLALDAIH---SMGLIHRDVKPDNMLLDKHGHLKLADFGTC  189 (370)
T ss_pred             EEEEcCCCCCcHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEEecccc
Confidence            9999999999999999432      4788899999999999999999   999999999999999999999999999999


Q ss_pred             eecCCCCccccceeecCCceeeeecC
Q 026214          213 ISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ..+........  ....++..|+|||
T Consensus       190 ~~~~~~~~~~~--~~~~gt~~Y~aPE  213 (370)
T cd05621         190 MKMDETGMVRC--DTAVGTPDYISPE  213 (370)
T ss_pred             eecccCCceec--ccCCCCcccCCHH
Confidence            98754432211  2233556788887

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.97  E-value=4.8e-30  Score=221.27  Aligned_cols=147  Identities=13%  Similarity=0.158  Sum_probs=131.9

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      ++|...+.||+|+||.||+|.+  ++..||+|.+....   ......+.+|+.++..++||||+++++++.+....++||
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~   80 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM   80 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence            3678889999999999999998  78999999987532   123356788999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||+++|+|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++.+.
T Consensus        81 E~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~lH---~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~  152 (363)
T cd05628          81 EFLPGGDMMTLLMKK-----DTLTEEETQFYIAETVLAIDSIH---QLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLK  152 (363)
T ss_pred             cCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCCEEEeeccCccccc
Confidence            999999999999654     45899999999999999999999   9999999999999999999999999999998654

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.97  E-value=4.2e-30  Score=220.46  Aligned_cols=149  Identities=15%  Similarity=0.173  Sum_probs=136.2

Q ss_pred             HHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcce
Q 026214           59 LATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPI  133 (241)
Q Consensus        59 ~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  133 (241)
                      ...+.|.....||+|+||.||.|.-  +|..+|+|++++..   ....+....|-.+|...++|+||+|+..|++...+|
T Consensus       138 ~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LY  217 (550)
T KOG0605|consen  138 LSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLY  217 (550)
T ss_pred             CCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeE
Confidence            3557899999999999999999987  99999999998754   234566788999999999999999999999999999


Q ss_pred             EEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCce
Q 026214          134 LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSI  213 (241)
Q Consensus       134 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~  213 (241)
                      |||||++||++..+|..     .+.|++..+..++.+++.||.-||   ..|+|||||||+|+|||..|++|++|||||.
T Consensus       218 LiMEylPGGD~mTLL~~-----~~~L~e~~arfYiaE~vlAI~~iH---~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~  289 (550)
T KOG0605|consen  218 LIMEYLPGGDMMTLLMR-----KDTLTEDWARFYIAETVLAIESIH---QLGYIHRDIKPDNLLIDAKGHIKLSDFGLST  289 (550)
T ss_pred             EEEEecCCccHHHHHHh-----cCcCchHHHHHHHHHHHHHHHHHH---HcCcccccCChhheeecCCCCEeeccccccc
Confidence            99999999999999955     467999999999999999999999   9999999999999999999999999999996


Q ss_pred             ec
Q 026214          214 SI  215 (241)
Q Consensus       214 ~~  215 (241)
                      -+
T Consensus       290 gl  291 (550)
T KOG0605|consen  290 GL  291 (550)
T ss_pred             hh
Confidence            54

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.97  E-value=1.4e-29  Score=211.29  Aligned_cols=166  Identities=17%  Similarity=0.219  Sum_probs=139.8

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC---cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEe
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR---DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFE  137 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  137 (241)
                      .|...+.||+|+||.||+|.+  ++..||+|.+.....   .....+.+|+.++..++|+||+++.+++.+.+..++++|
T Consensus         1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05631           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence            366778999999999999998  789999999875421   223457899999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCC
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE  217 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~  217 (241)
                      |+++|+|.+.+...   ....+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.++|+|||++..+..
T Consensus        81 ~~~~g~L~~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~  154 (285)
T cd05631          81 IMNGGDLKFHIYNM---GNPGFDEQRAIFYAAELCCGLEDLQ---RERIVYRDLKPENILLDDRGHIRISDLGLAVQIPE  154 (285)
T ss_pred             ecCCCcHHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCC
Confidence            99999999888654   2345899999999999999999999   99999999999999999999999999999987654


Q ss_pred             CCccccceeecCCceeeeecC
Q 026214          218 GGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .....    ...++..|++||
T Consensus       155 ~~~~~----~~~g~~~y~aPE  171 (285)
T cd05631         155 GETVR----GRVGTVGYMAPE  171 (285)
T ss_pred             CCeec----CCCCCCCccCHh
Confidence            33211    123455678887

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.97  E-value=1e-29  Score=215.87  Aligned_cols=160  Identities=15%  Similarity=0.120  Sum_probs=135.4

Q ss_pred             CeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCCCC
Q 026214           68 NVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYG  142 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g  142 (241)
                      +.||+|+||.||++.+  ++..||+|.+....   ......+.+|+.++..++||||+++.+++...+..++||||++++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~   80 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence            4689999999999998  78999999987542   223456788999999999999999999999999999999999999


Q ss_pred             CHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCccc
Q 026214          143 NLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSG  222 (241)
Q Consensus       143 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~~  222 (241)
                      +|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++.........
T Consensus        81 ~L~~~l~~~-----~~~~~~~~~~~~~qi~~~L~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~  152 (323)
T cd05571          81 ELFFHLSRE-----RVFSEDRARFYGAEIVSALGYLH---SCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATM  152 (323)
T ss_pred             cHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcc
Confidence            999998654     45899999999999999999999   9999999999999999999999999999998643322211


Q ss_pred             cceeecCCceeeeecC
Q 026214          223 AKCLKSERTEICCVRE  238 (241)
Q Consensus       223 ~~~~~~~~~~~~~~~e  238 (241)
                         ....++..|++||
T Consensus       153 ---~~~~gt~~y~aPE  165 (323)
T cd05571         153 ---KTFCGTPEYLAPE  165 (323)
T ss_pred             ---cceecCccccChh
Confidence               1223455788888

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.97  E-value=6e-31  Score=219.51  Aligned_cols=156  Identities=19%  Similarity=0.251  Sum_probs=140.7

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCc---chhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRD---GHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      ..|...+.||+|.||.|-+++.  .|+.||||.++++...   +.-...+|+++|..|+||||++++.+|...+.+.+||
T Consensus        53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM  132 (668)
T KOG0611|consen   53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM  132 (668)
T ss_pred             hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence            5577888999999999999988  8999999999876544   3455789999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||..+|.|++++...     +.+++.....++.||+.|+.|+|   .++++|||||.+|||+|.++++||+|||++..+.
T Consensus       133 EYaS~GeLYDYiSer-----~~LsErEaRhfFRQIvSAVhYCH---knrVvHRDLKLENILLD~N~NiKIADFGLSNly~  204 (668)
T KOG0611|consen  133 EYASGGELYDYISER-----GSLSEREARHFFRQIVSAVHYCH---KNRVVHRDLKLENILLDQNNNIKIADFGLSNLYA  204 (668)
T ss_pred             EecCCccHHHHHHHh-----ccccHHHHHHHHHHHHHHHHHHh---hccceecccchhheeecCCCCeeeeccchhhhhc
Confidence            999999999999665     56999999999999999999999   9999999999999999999999999999999887


Q ss_pred             CCCccccce
Q 026214          217 EGGTSGAKC  225 (241)
Q Consensus       217 ~~~~~~~~~  225 (241)
                      .+.-..+.|
T Consensus       205 ~~kfLqTFC  213 (668)
T KOG0611|consen  205 DKKFLQTFC  213 (668)
T ss_pred             cccHHHHhc
Confidence            765554444

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.97  E-value=6.5e-30  Score=217.69  Aligned_cols=163  Identities=15%  Similarity=0.194  Sum_probs=140.7

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      ++|...+.||+|+||.||+|.+  ++..||+|.+....   ......+.+|+.++..++||||+++++++...+..+++|
T Consensus        18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   97 (329)
T PTZ00263         18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL   97 (329)
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence            5577889999999999999998  78899999987542   223466889999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||+.+++|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++..+.
T Consensus        98 e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~  169 (329)
T PTZ00263         98 EFVVGGELFTHLRKA-----GRFPNDVAKFYHAELVLAFEYLH---SKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVP  169 (329)
T ss_pred             cCCCCChHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEECCCCCEEEeeccCceEcC
Confidence            999999999999654     35788889999999999999999   9999999999999999999999999999998775


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ....      ...++..|+|||
T Consensus       170 ~~~~------~~~gt~~y~aPE  185 (329)
T PTZ00263        170 DRTF------TLCGTPEYLAPE  185 (329)
T ss_pred             CCcc------eecCChhhcCHH
Confidence            4322      123455678887

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.97  E-value=1.4e-29  Score=215.51  Aligned_cols=168  Identities=13%  Similarity=0.052  Sum_probs=143.5

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      ++|...+.||+|+||.||++.+  ++..||+|.+....   ......+.+|+.++..++||||+++++++...+..++||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM   80 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence            3688889999999999999998  78999999988642   223456788999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||+++++|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++..+.
T Consensus        81 e~~~~~~L~~~l~~~----~~~l~~~~~~~~~~qi~~aL~~lH---~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~  153 (330)
T cd05601          81 EYQPGGDLLSLLNRY----EDQFDEDMAQFYLAELVLAIHSVH---QMGYVHRDIKPENVLIDRTGHIKLADFGSAARLT  153 (330)
T ss_pred             CCCCCCCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEcccCchHheEECCCCCEEeccCCCCeECC
Confidence            999999999999664    346899999999999999999999   9999999999999999999999999999999876


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .+.....  ....++..|++||
T Consensus       154 ~~~~~~~--~~~~gt~~y~aPE  173 (330)
T cd05601         154 ANKMVNS--KLPVGTPDYIAPE  173 (330)
T ss_pred             CCCceee--ecccCCccccCHH
Confidence            5543321  1223455678887

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=8.9e-30  Score=217.05  Aligned_cols=163  Identities=16%  Similarity=0.152  Sum_probs=139.7

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      ++|...+.||+|+||.||+|.+  ++..||+|.+....   ......+.+|+.++..++||||+++++++...+..++||
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~   80 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM   80 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence            3688889999999999999998  68899999987642   223456889999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||+++++|.+++...     ..+++..+..++.|++.||.|||   +.+++||||||+|||++.++.+||+|||++....
T Consensus        81 e~~~g~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~  152 (333)
T cd05600          81 EYVPGGDFRTLLNNL-----GVLSEDHARFYMAEMFEAVDALH---ELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIV  152 (333)
T ss_pred             eCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEEEeCcCCcccc
Confidence            999999999999553     45889999999999999999999   9999999999999999999999999999998664


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ...      ....++..|++||
T Consensus       153 ~~~------~~~~gt~~y~aPE  168 (333)
T cd05600         153 TYA------NSVVGSPDYMAPE  168 (333)
T ss_pred             ccc------CCcccCccccChh
Confidence            411      1122345677777

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=1.3e-29  Score=219.59  Aligned_cols=146  Identities=15%  Similarity=0.136  Sum_probs=130.6

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      ++|...+.||+|+||.||++..  ++..||+|.+....   ......+.+|+.++..++||||+++++++.+.+..++||
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~   80 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM   80 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence            3678889999999999999998  88999999986532   223456788999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceec
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI  215 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~  215 (241)
                      ||+++|+|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.++|+|||+|+.+
T Consensus        81 E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~ql~~aL~~LH---~~givHrDlkp~NIll~~~~~~kl~DfGla~~~  151 (377)
T cd05629          81 EFLPGGDLMTMLIKY-----DTFSEDVTRFYMAECVLAIEAVH---KLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGF  151 (377)
T ss_pred             eCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEEeeccccccc
Confidence            999999999999553     45888999999999999999999   999999999999999999999999999999744

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.97  E-value=9.6e-31  Score=227.04  Aligned_cols=175  Identities=19%  Similarity=0.323  Sum_probs=148.3

Q ss_pred             HHHHHHHhcCCCcCCeeecccceEEEEEEECCeEEEEEEeeccCC--cchhhHHHHHHHHHhcCCCceeeEeeEEecCCc
Q 026214           54 AQELKLATNNYDQKNVITEDWGCILYKGFWQERLISVMRFRESNR--DGHGSCINNIVYAAQMSHDHILKLIGCCLETPI  131 (241)
Q Consensus        54 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  131 (241)
                      ..+|......+.....||+|+||+||+|.+.| .||||.+.-+..  ...+.|.+|+.++++-+|.||+-+.|+|..++.
T Consensus       384 ~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG-dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~  462 (678)
T KOG0193|consen  384 LEEWEIPPEEVLLGERIGSGSFGTVYRGRWHG-DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL  462 (678)
T ss_pred             ccccccCHHHhhccceeccccccceeeccccc-ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce
Confidence            46667677777788999999999999999865 589999876543  356889999999999999999999999998877


Q ss_pred             ceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccC
Q 026214          132 PILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL  211 (241)
Q Consensus       132 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~  211 (241)
                       .+|+-+|.|.||+.+++-.    ...+.....+.|+.||+.|+.|||   .++|||||||+.||++.+++.|||+|||+
T Consensus       463 -AIiTqwCeGsSLY~hlHv~----etkfdm~~~idIAqQiaqGM~YLH---AK~IIHrDLKSnNIFl~~~~kVkIgDFGL  534 (678)
T KOG0193|consen  463 -AIITQWCEGSSLYTHLHVQ----ETKFDMNTTIDIAQQIAQGMDYLH---AKNIIHRDLKSNNIFLHEDLKVKIGDFGL  534 (678)
T ss_pred             -eeeehhccCchhhhhccch----hhhhhHHHHHHHHHHHHHhhhhhh---hhhhhhhhccccceEEccCCcEEEecccc
Confidence             8999999999999999876    456888999999999999999999   99999999999999999999999999999


Q ss_pred             ceecCCCCccccceeecCCceeeeecC
Q 026214          212 SISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       212 a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +..-.-= ......-+..++-.|+|||
T Consensus       535 atvk~~w-~g~~q~~qp~gsilwmAPE  560 (678)
T KOG0193|consen  535 ATVKTRW-SGEQQLEQPHGSLLWMAPE  560 (678)
T ss_pred             eeeeeee-ccccccCCCccchhhhcHH
Confidence            8643211 1112234566777889998

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.97  E-value=2.6e-29  Score=211.35  Aligned_cols=173  Identities=18%  Similarity=0.210  Sum_probs=138.5

Q ss_pred             cCCCcCCeeecccceEEEEEEE------------------CCeEEEEEEeeccCC-cchhhHHHHHHHHHhcCCCceeeE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW------------------QERLISVMRFRESNR-DGHGSCINNIVYAAQMSHDHILKL  122 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~------------------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l  122 (241)
                      +.|...++||+|+||.||+|.+                  ++..||+|.+..... .....+.+|+.++.+++||||+++
T Consensus         5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~   84 (304)
T cd05096           5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL   84 (304)
T ss_pred             hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence            4677889999999999999975                  234699999876432 234568999999999999999999


Q ss_pred             eeEEecCCcceEEEeeCCCCCHHHHHhhcCC--------------CCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEE
Q 026214          123 IGCCLETPIPILAFESVEYGNLRDRILSASQ--------------PQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVY  188 (241)
Q Consensus       123 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~--------------~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH  188 (241)
                      ++++.+.+..+++|||+++++|.+++.....              .....+++..+..++.|++.||.|||   +.+|+|
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~ivH  161 (304)
T cd05096          85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLS---SLNFVH  161 (304)
T ss_pred             EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH---HCCccc
Confidence            9999999999999999999999999865311              01234788889999999999999999   999999


Q ss_pred             ccCCCCCeeEcCCCcEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          189 RDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       189 ~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +||||+|||++.++.+||+|||+++.+........ ......+..|++||
T Consensus       162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~-~~~~~~~~~y~aPE  210 (304)
T cd05096         162 RDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRI-QGRAVLPIRWMAWE  210 (304)
T ss_pred             cCcchhheEEcCCccEEECCCccceecccCceeEe-cCcCCCCccccCHH
Confidence            99999999999999999999999987654432111 01111234577887

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.96  E-value=1e-29  Score=216.93  Aligned_cols=175  Identities=18%  Similarity=0.265  Sum_probs=138.4

Q ss_pred             HhcCCCcCCeeecccceEEEEEEE-------CCeEEEEEEeeccCC-cchhhHHHHHHHHHhc-CCCceeeEeeEEecCC
Q 026214           60 ATNNYDQKNVITEDWGCILYKGFW-------QERLISVMRFRESNR-DGHGSCINNIVYAAQM-SHDHILKLIGCCLETP  130 (241)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~  130 (241)
                      ..++|...++||+|+||.||+|.+       ++..||+|.+..... .....+.+|+.++..+ +||||+++++++...+
T Consensus         5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~   84 (338)
T cd05102           5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPN   84 (338)
T ss_pred             chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence            446688899999999999999974       346799999875432 2346789999999999 8999999999887654


Q ss_pred             -cceEEEeeCCCCCHHHHHhhcCCC-------------------------------------------------------
Q 026214          131 -IPILAFESVEYGNLRDRILSASQP-------------------------------------------------------  154 (241)
Q Consensus       131 -~~~lv~e~~~~gsL~~~l~~~~~~-------------------------------------------------------  154 (241)
                       ..+++|||+++|+|.+++......                                                       
T Consensus        85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (338)
T cd05102          85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD  164 (338)
T ss_pred             CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence             578999999999999999753110                                                       


Q ss_pred             --CCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCccccceeecCCce
Q 026214          155 --QTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSERTE  232 (241)
Q Consensus       155 --~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~  232 (241)
                        ...++++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++.+..+..... ......+.
T Consensus       165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~-~~~~~~~~  240 (338)
T cd05102         165 DLWKSPLTMEDLICYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVR-KGSARLPL  240 (338)
T ss_pred             ccccCCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhc-ccCCCCCc
Confidence              0235788899999999999999999   99999999999999999999999999999987654322211 11122234


Q ss_pred             eeeecC
Q 026214          233 ICCVRE  238 (241)
Q Consensus       233 ~~~~~e  238 (241)
                      .|+|||
T Consensus       241 ~y~aPE  246 (338)
T cd05102         241 KWMAPE  246 (338)
T ss_pred             cccCcH
Confidence            578888

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.96  E-value=1.3e-29  Score=216.83  Aligned_cols=163  Identities=17%  Similarity=0.190  Sum_probs=139.2

Q ss_pred             cCCCcCCeeecccceEEEEEEE--C-CeEEEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--Q-ERLISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA  135 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  135 (241)
                      ++|...+.||+|+||.||+|.+  + +..||+|.+....   ......+.+|+.++..++||||+++++++.+.+..+++
T Consensus        30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv  109 (340)
T PTZ00426         30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV  109 (340)
T ss_pred             hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence            4588889999999999999987  3 3689999986532   23346688999999999999999999999999999999


Q ss_pred             EeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceec
Q 026214          136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI  215 (241)
Q Consensus       136 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~  215 (241)
                      |||+++|+|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++..+
T Consensus       110 ~Ey~~~g~L~~~i~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~  181 (340)
T PTZ00426        110 LEFVIGGEFFTFLRRN-----KRFPNDVGCFYAAQIVLIFEYLQ---SLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVV  181 (340)
T ss_pred             EeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEecCCCCeec
Confidence            9999999999999654     35889999999999999999999   999999999999999999999999999999876


Q ss_pred             CCCCccccceeecCCceeeeecC
Q 026214          216 PEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .....      ...++..|+|||
T Consensus       182 ~~~~~------~~~gt~~y~aPE  198 (340)
T PTZ00426        182 DTRTY------TLCGTPEYIAPE  198 (340)
T ss_pred             CCCcc------eecCChhhcCHH
Confidence            54321      223445678887

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.96  E-value=4e-29  Score=208.87  Aligned_cols=166  Identities=19%  Similarity=0.264  Sum_probs=138.8

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC-cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR-DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      ..|...+.||.|+||.||+|.+  ++..||+|.+..... .....+.+|+.+++.++||||+++++++...+..++||||
T Consensus         5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   84 (288)
T cd07871           5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY   84 (288)
T ss_pred             ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence            4588889999999999999998  789999999875432 2345678999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      ++ ++|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus        85 ~~-~~l~~~l~~~----~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~  156 (288)
T cd07871          85 LD-SDLKQYLDNC----GNLMSMHNVKIFMFQLLRGLSYCH---KRKILHRDLKPQNLLINEKGELKLADFGLARAKSVP  156 (288)
T ss_pred             CC-cCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEECcCcceeeccCC
Confidence            98 5999988654    335788999999999999999999   999999999999999999999999999999876433


Q ss_pred             CccccceeecCCceeeeecC
Q 026214          219 GTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ....   .....+..|+|||
T Consensus       157 ~~~~---~~~~~~~~y~aPE  173 (288)
T cd07871         157 TKTY---SNEVVTLWYRPPD  173 (288)
T ss_pred             Cccc---cCceecccccChH
Confidence            2211   1123355688887

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.96  E-value=1.7e-29  Score=219.23  Aligned_cols=145  Identities=13%  Similarity=0.141  Sum_probs=130.3

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEe
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFE  137 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  137 (241)
                      .|...+.||+|+||.||+|.+  ++..||+|.+....   ......+.+|+.++..++||||+++++++.+.+..++|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E   81 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence            477888999999999999998  78899999997642   2234568899999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceec
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI  215 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~  215 (241)
                      |+++|+|.+++...     ..+++..+..++.|++.||.|||   ..+|+||||||+|||++.++.+||+|||++..+
T Consensus        82 ~~~gg~L~~~l~~~-----~~~~e~~~~~~~~qi~~aL~~LH---~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~  151 (381)
T cd05626          82 YIPGGDMMSLLIRM-----EVFPEVLARFYIAELTLAIESVH---KMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGF  151 (381)
T ss_pred             cCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCcHHHEEECCCCCEEEeeCcCCccc
Confidence            99999999999654     35888999999999999999999   999999999999999999999999999998654

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=6.9e-30  Score=213.83  Aligned_cols=163  Identities=20%  Similarity=0.189  Sum_probs=139.3

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      ++|...+.||+|+||.||+|.+  ++..||+|.+....   ......+.+|+.+++.++||||+++++++.+.+..+++|
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   80 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM   80 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence            3578889999999999999998  68999999987532   123456889999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||+++++|.+++...     ..+++..+..++.|++.||.|||   +.+++||||||+|||++.++.+||+|||++..+.
T Consensus        81 e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~  152 (291)
T cd05612          81 EYVPGGELFSYLRNS-----GRFSNSTGLFYASEIVCALEYLH---SKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLR  152 (291)
T ss_pred             eCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEEecCcchhcc
Confidence            999999999999654     45889999999999999999999   9999999999999999999999999999998764


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .....      ..++..|++||
T Consensus       153 ~~~~~------~~gt~~y~aPE  168 (291)
T cd05612         153 DRTWT------LCGTPEYLAPE  168 (291)
T ss_pred             CCccc------ccCChhhcCHH
Confidence            33211      12345677887

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=3.1e-29  Score=213.66  Aligned_cols=168  Identities=13%  Similarity=0.074  Sum_probs=141.2

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeecc---CCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRES---NRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      ++|...+.||+|+||.||++.+  ++..||+|.+...   .....+.+.+|+.++..++|+||+++++++...+..++||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM   80 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence            3678889999999999999998  7889999998752   1223455888999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||+++++|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.++|+|||++..+.
T Consensus        81 e~~~g~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~  153 (331)
T cd05597          81 DYYVGGDLLTLLSKF----EDRLPEDMARFYLAEMVLAIDSVH---QLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLL  153 (331)
T ss_pred             ecCCCCcHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---hCCeEECCCCHHHEEECCCCCEEEEECCceeecC
Confidence            999999999999653    345889999999999999999999   9999999999999999999999999999998776


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ..........  .++..|++||
T Consensus       154 ~~~~~~~~~~--~gt~~y~aPE  173 (331)
T cd05597         154 ADGTVQSNVA--VGTPDYISPE  173 (331)
T ss_pred             CCCCccccce--eccccccCHH
Confidence            5443222211  2344577776

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.96  E-value=1e-29  Score=219.79  Aligned_cols=168  Identities=14%  Similarity=0.126  Sum_probs=141.4

Q ss_pred             HhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceE
Q 026214           60 ATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPIL  134 (241)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  134 (241)
                      ..++|...+.||+|+||.||++.+  ++..||+|.+....   ......+.+|+.+++.++||||+++++++...+..++
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l  120 (370)
T cd05596          41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM  120 (370)
T ss_pred             CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence            446688899999999999999998  78899999987532   2233457889999999999999999999999999999


Q ss_pred             EEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCcee
Q 026214          135 AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSIS  214 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~  214 (241)
                      ||||+++|+|.+++...      .+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++..
T Consensus       121 v~Ey~~gg~L~~~l~~~------~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~  191 (370)
T cd05596         121 VMEYMPGGDLVNLMSNY------DIPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMK  191 (370)
T ss_pred             EEcCCCCCcHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEcCCCCEEEEeccceee
Confidence            99999999999998443      4788889999999999999999   99999999999999999999999999999987


Q ss_pred             cCCCCccccceeecCCceeeeecC
Q 026214          215 IPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +..+.....  ....++..|+|||
T Consensus       192 ~~~~~~~~~--~~~~gt~~y~aPE  213 (370)
T cd05596         192 MDANGMVRC--DTAVGTPDYISPE  213 (370)
T ss_pred             ccCCCcccC--CCCCCCcCeECHH
Confidence            755432211  1223456688887

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.96  E-value=1.7e-29  Score=218.58  Aligned_cols=173  Identities=14%  Similarity=0.139  Sum_probs=144.6

Q ss_pred             HHHHHHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEecC
Q 026214           55 QELKLATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCLET  129 (241)
Q Consensus        55 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  129 (241)
                      .++....++|...+.||+|+||.||++.+  ++..+|+|.+....   ......+.+|+.++..++||||+++++++..+
T Consensus        36 ~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~  115 (371)
T cd05622          36 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD  115 (371)
T ss_pred             hhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC
Confidence            34455567899999999999999999998  78899999986532   12334577899999999999999999999999


Q ss_pred             CcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccc
Q 026214          130 PIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDF  209 (241)
Q Consensus       130 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~Df  209 (241)
                      +..++||||+++|+|.+++...      .+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+||
T Consensus       116 ~~~~lv~Ey~~gg~L~~~~~~~------~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NIll~~~~~ikL~Df  186 (371)
T cd05622         116 RYLYMVMEYMPGGDLVNLMSNY------DVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADF  186 (371)
T ss_pred             CEEEEEEcCCCCCcHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHEEECCCCCEEEEeC
Confidence            9999999999999999998543      3788888999999999999999   999999999999999999999999999


Q ss_pred             cCceecCCCCccccceeecCCceeeeecC
Q 026214          210 SLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       210 G~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |++..+........  ....++..|+|||
T Consensus       187 G~a~~~~~~~~~~~--~~~~gt~~y~aPE  213 (371)
T cd05622         187 GTCMKMNKEGMVRC--DTAVGTPDYISPE  213 (371)
T ss_pred             CceeEcCcCCcccc--cCcccCccccCHH
Confidence            99998765432221  1223455688887

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.96  E-value=3.6e-29  Score=213.30  Aligned_cols=168  Identities=14%  Similarity=0.096  Sum_probs=141.8

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      ++|...+.||+|+||.||++.+  +++.||+|.+....   ......+.+|..++..++|+||+++++++...+..++||
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~   80 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM   80 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            4688889999999999999998  77889999987532   122345788999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||+++|+|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++..+.
T Consensus        81 Ey~~gg~L~~~l~~~----~~~l~~~~~~~~~~qi~~~L~~lH---~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~  153 (331)
T cd05624          81 DYYVGGDLLTLLSKF----EDRLPEDMARFYIAEMVLAIHSIH---QLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMN  153 (331)
T ss_pred             eCCCCCcHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCchHHEEEcCCCCEEEEeccceeecc
Confidence            999999999999764    345889999999999999999999   9999999999999999999999999999998876


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .+......  ...++..|++||
T Consensus       154 ~~~~~~~~--~~~gt~~y~aPE  173 (331)
T cd05624         154 QDGTVQSS--VAVGTPDYISPE  173 (331)
T ss_pred             CCCceeec--cccCCcccCCHH
Confidence            55432221  123455678887

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.96  E-value=4.9e-29  Score=211.88  Aligned_cols=160  Identities=16%  Similarity=0.130  Sum_probs=134.5

Q ss_pred             CeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCCCC
Q 026214           68 NVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYG  142 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g  142 (241)
                      +.||+|+||.||++.+  ++..||+|.+....   ......+.+|+.++..++||||+++.+++...+..++||||+++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence            4689999999999998  88999999987642   223456788999999999999999999999999999999999999


Q ss_pred             CHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCC-CCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCcc
Q 026214          143 NLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFP-RPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTS  221 (241)
Q Consensus       143 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~-~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~  221 (241)
                      +|.+++...     ..+++..+..++.|++.||.|||   + .+|+||||||+|||++.++.+||+|||+++....+...
T Consensus        81 ~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~lH---~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~  152 (325)
T cd05594          81 ELFFHLSRE-----RVFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT  152 (325)
T ss_pred             cHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcc
Confidence            999988543     45899999999999999999999   7 79999999999999999999999999999865433222


Q ss_pred             ccceeecCCceeeeecC
Q 026214          222 GAKCLKSERTEICCVRE  238 (241)
Q Consensus       222 ~~~~~~~~~~~~~~~~e  238 (241)
                      .   ....++..|++||
T Consensus       153 ~---~~~~gt~~y~aPE  166 (325)
T cd05594         153 M---KTFCGTPEYLAPE  166 (325)
T ss_pred             c---ccccCCcccCCHH
Confidence            1   1223455678887

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.96  E-value=3.5e-29  Score=213.12  Aligned_cols=160  Identities=16%  Similarity=0.119  Sum_probs=135.3

Q ss_pred             CeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCCCC
Q 026214           68 NVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYG  142 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g  142 (241)
                      +.||+|+||.||++.+  ++..||+|.+....   ......+.+|+.+++.++||||+++.+++...+..++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g   80 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG   80 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence            4689999999999998  78999999987642   223466889999999999999999999999999999999999999


Q ss_pred             CHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCccc
Q 026214          143 NLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSG  222 (241)
Q Consensus       143 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~~  222 (241)
                      +|.+.+...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++.........
T Consensus        81 ~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~  152 (328)
T cd05593          81 ELFFHLSRE-----RVFSEDRTRFYGAEIVSALDYLH---SGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATM  152 (328)
T ss_pred             CHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeEECCCCcEEEecCcCCccCCCccccc
Confidence            999888543     45899999999999999999999   9999999999999999999999999999998643322111


Q ss_pred             cceeecCCceeeeecC
Q 026214          223 AKCLKSERTEICCVRE  238 (241)
Q Consensus       223 ~~~~~~~~~~~~~~~e  238 (241)
                         ....++..|++||
T Consensus       153 ---~~~~gt~~y~aPE  165 (328)
T cd05593         153 ---KTFCGTPEYLAPE  165 (328)
T ss_pred             ---ccccCCcCccChh
Confidence               1123455688888

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.96  E-value=2.7e-29  Score=213.35  Aligned_cols=161  Identities=17%  Similarity=0.138  Sum_probs=135.4

Q ss_pred             CeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCCCC
Q 026214           68 NVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYG  142 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g  142 (241)
                      +.||+|+||.||++.+  ++..||+|.+....   ......+.+|+.++..++||||+++++++...+..++||||++++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence            4689999999999998  78999999987642   223456788999999999999999999999999999999999999


Q ss_pred             CHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCccc
Q 026214          143 NLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSG  222 (241)
Q Consensus       143 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~~  222 (241)
                      +|..++...     ..+++..+..++.|++.||.|||   +.+++||||||+|||++.++.+||+|||++.....+....
T Consensus        81 ~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~  152 (323)
T cd05595          81 ELFFHLSRE-----RVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM  152 (323)
T ss_pred             cHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCcc
Confidence            999888554     35899999999999999999999   9999999999999999999999999999988643332211


Q ss_pred             cceeecCCceeeeecCC
Q 026214          223 AKCLKSERTEICCVREN  239 (241)
Q Consensus       223 ~~~~~~~~~~~~~~~e~  239 (241)
                         ....++..|++||-
T Consensus       153 ---~~~~gt~~y~aPE~  166 (323)
T cd05595         153 ---KTFCGTPEYLAPEV  166 (323)
T ss_pred             ---ccccCCcCcCCccc
Confidence               12234556888883

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.96  E-value=5.5e-29  Score=209.39  Aligned_cols=167  Identities=19%  Similarity=0.218  Sum_probs=139.7

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC-cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEe
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR-DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFE  137 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  137 (241)
                      .++|...+.||+|+||.||+|.+  ++..||+|.+..... .....+.+|+.+++.++||||+++++++.++...++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   83 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE   83 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence            36788899999999999999998  788999999875432 233467889999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCC
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE  217 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~  217 (241)
                      |+. ++|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++.....
T Consensus        84 ~~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~  155 (303)
T cd07869          84 YVH-TDLCQYMDKH----PGGLHPENVKLFLFQLLRGLSYIH---QRYILHRDLKPQNLLISDTGELKLADFGLARAKSV  155 (303)
T ss_pred             CCC-cCHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECCCCcceeccC
Confidence            996 6888888654    345888999999999999999999   99999999999999999999999999999986543


Q ss_pred             CCccccceeecCCceeeeecC
Q 026214          218 GGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .....   ....++..|+|||
T Consensus       156 ~~~~~---~~~~~~~~y~aPE  173 (303)
T cd07869         156 PSHTY---SNEVVTLWYRPPD  173 (303)
T ss_pred             CCccC---CCCcccCCCCChH
Confidence            32211   1223455688887

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.96  E-value=3.3e-29  Score=216.98  Aligned_cols=145  Identities=13%  Similarity=0.135  Sum_probs=129.8

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEe
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFE  137 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  137 (241)
                      .|...+.||+|+||.||++.+  ++..||+|.+....   ......+.+|+.++..++||||+++++.+...+..++|||
T Consensus         2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E   81 (376)
T cd05598           2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (376)
T ss_pred             CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence            578889999999999999998  78999999986532   1234567899999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceec
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI  215 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~  215 (241)
                      |+++|+|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.++|+|||+|..+
T Consensus        82 ~~~~g~L~~~i~~~-----~~~~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~  151 (376)
T cd05598          82 YIPGGDMMSLLIRL-----GIFEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGF  151 (376)
T ss_pred             CCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHEEECCCCCEEEEeCCCCccc
Confidence            99999999999554     45888889999999999999999   999999999999999999999999999998643

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.96  E-value=2.4e-30  Score=202.33  Aligned_cols=150  Identities=17%  Similarity=0.243  Sum_probs=135.8

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEE
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA  135 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  135 (241)
                      .++|+.++.||+|-||.||.|+.  ++..||+|++.+..   .....++.+|+++.+.|+||||++++++|.+....||+
T Consensus        21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi  100 (281)
T KOG0580|consen   21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI  100 (281)
T ss_pred             hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence            35688899999999999999998  78899999987643   23357789999999999999999999999999999999


Q ss_pred             EeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceec
Q 026214          136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI  215 (241)
Q Consensus       136 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~  215 (241)
                      +||.+.|+|...+...   ....+++.....++.|++.||.|+|   ..+++|||+||+|+|++..+.+||+|||-+..-
T Consensus       101 lEya~~gel~k~L~~~---~~~~f~e~~~a~Yi~q~A~Al~y~h---~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~  174 (281)
T KOG0580|consen  101 LEYAPRGELYKDLQEG---RMKRFDEQRAATYIKQLANALLYCH---LKRVIHRDIKPENLLLGSAGELKIADFGWSVHA  174 (281)
T ss_pred             EEecCCchHHHHHHhc---ccccccccchhHHHHHHHHHHHHhc---cCCcccCCCCHHHhccCCCCCeeccCCCceeec
Confidence            9999999999999765   3456888889999999999999999   999999999999999999999999999999876


Q ss_pred             C
Q 026214          216 P  216 (241)
Q Consensus       216 ~  216 (241)
                      +
T Consensus       175 p  175 (281)
T KOG0580|consen  175 P  175 (281)
T ss_pred             C
Confidence            5

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=3.6e-29  Score=211.55  Aligned_cols=158  Identities=16%  Similarity=0.130  Sum_probs=133.7

Q ss_pred             eecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCCCCCH
Q 026214           70 ITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNL  144 (241)
Q Consensus        70 lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL  144 (241)
                      ||+|+||.||+|.+  ++..||+|.+....   ......+.+|+.++..++||||+++++++...+..++||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            69999999999998  78899999987532   23346688999999999999999999999999999999999999999


Q ss_pred             HHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCccccc
Q 026214          145 RDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAK  224 (241)
Q Consensus       145 ~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~~~~  224 (241)
                      .+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.++|+|||+++.........  
T Consensus        81 ~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~--  150 (312)
T cd05585          81 FHHLQRE-----GRFDLSRARFYTAELLCALENLH---KFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKT--  150 (312)
T ss_pred             HHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCcc--
Confidence            9999653     35889999999999999999999   9999999999999999999999999999998653332211  


Q ss_pred             eeecCCceeeeecC
Q 026214          225 CLKSERTEICCVRE  238 (241)
Q Consensus       225 ~~~~~~~~~~~~~e  238 (241)
                       ....++..|+|||
T Consensus       151 -~~~~gt~~y~aPE  163 (312)
T cd05585         151 -NTFCGTPEYLAPE  163 (312)
T ss_pred             -ccccCCcccCCHH
Confidence             1122455678887

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.96  E-value=2.5e-29  Score=218.24  Aligned_cols=145  Identities=12%  Similarity=0.136  Sum_probs=129.7

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEe
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFE  137 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  137 (241)
                      .|...+.||+|+||.||+|.+  ++..||+|.+....   ......+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E   81 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD   81 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence            477889999999999999998  78899999987542   1234568889999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceec
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI  215 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~  215 (241)
                      |+++|+|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+|..+
T Consensus        82 ~~~gg~L~~~l~~~-----~~~~e~~~~~~~~qi~~al~~lH---~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~  151 (382)
T cd05625          82 YIPGGDMMSLLIRM-----GIFPEDLARFYIAELTCAVESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGF  151 (382)
T ss_pred             CCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEeECCCCccc
Confidence            99999999999654     35788899999999999999999   999999999999999999999999999998643

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.96  E-value=4e-29  Score=212.95  Aligned_cols=167  Identities=18%  Similarity=0.223  Sum_probs=137.6

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeecc--CCcchhhHHHHHHHHHhcCCCceeeEeeEEecCC-----cce
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRES--NRDGHGSCINNIVYAAQMSHDHILKLIGCCLETP-----IPI  133 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~  133 (241)
                      .|...+.||+|+||.||+|.+  ++..||+|++...  .......+.+|+.+++.++||||+++++++....     ..+
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   80 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY   80 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence            367788999999999999998  7899999998753  2223456889999999999999999999886432     479


Q ss_pred             EEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCce
Q 026214          134 LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSI  213 (241)
Q Consensus       134 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~  213 (241)
                      ++|||+. ++|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++
T Consensus        81 lv~e~~~-~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~  151 (338)
T cd07859          81 VVFELME-SDLHQVIKAN-----DDLTPEHHQFFLYQLLRALKYIH---TANVFHRDLKPKNILANADCKLKICDFGLAR  151 (338)
T ss_pred             EEEecCC-CCHHHHHHhc-----ccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEccCcccc
Confidence            9999996 6999988543     35899999999999999999999   9999999999999999999999999999998


Q ss_pred             ecCCCCccccceeecCCceeeeecC
Q 026214          214 SIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ....+...........++..|.|||
T Consensus       152 ~~~~~~~~~~~~~~~~~t~~y~aPE  176 (338)
T cd07859         152 VAFNDTPTAIFWTDYVATRWYRAPE  176 (338)
T ss_pred             ccccccCccccccCCCCCCCcCCHH
Confidence            7654433222223344566788888

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=2.7e-29  Score=211.25  Aligned_cols=199  Identities=20%  Similarity=0.236  Sum_probs=157.6

Q ss_pred             hhcChhhHHHHHHh--hCCCCCCccccCHHHHHHHhcCCCcCCeeecccceEEEEEEECCeEEEEEEeeccCCcchhhHH
Q 026214           28 MRNGASVLKELIAS--SNGKYNPYRIFSAQELKLATNNYDQKNVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCI  105 (241)
Q Consensus        28 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~  105 (241)
                      .-.+++.+.+++..  ++|+.+..+.+-.   +.........+.||+|.||.||+|.+.|..||||+|...+   ...+.
T Consensus       178 ~~~~~stl~Dll~~~~tSGSGSGlplLVQ---RTiarqI~L~e~IGkGRyGEVwrG~wrGe~VAVKiF~srd---E~SWf  251 (513)
T KOG2052|consen  178 TLAGDSTLKDLLDDLETSGSGSGLPLLVQ---RTIARQIVLQEIIGKGRFGEVWRGRWRGEDVAVKIFSSRD---ERSWF  251 (513)
T ss_pred             cccCCccHHHHHHhhccCCCCCCchhHhH---HhhhheeEEEEEecCccccceeeccccCCceEEEEecccc---hhhhh
Confidence            45667777777755  3444455443322   3333556778899999999999999999999999997654   34577


Q ss_pred             HHHHHHHhc--CCCceeeEeeEEecCC----cceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHh
Q 026214          106 NNIVYAAQM--SHDHILKLIGCCLETP----IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLH  179 (241)
Q Consensus       106 ~E~~~l~~l--~h~niv~l~~~~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH  179 (241)
                      +|-++++..  +|+||+.+++.-..++    .+|||++|.+.|||.|+|..      ..++....++++..+++||++||
T Consensus       252 rEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r------~tv~~~~ml~LalS~AsGLaHLH  325 (513)
T KOG2052|consen  252 RETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNR------NTVTTEGMLKLALSIASGLAHLH  325 (513)
T ss_pred             hHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeecccCCcHHHHHhh------ccCCHHHHHHHHHHHhhhHHHHH
Confidence            787877665  9999999998876554    68999999999999999944      46899999999999999999999


Q ss_pred             -----CCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCcccc-ceeecCCceeeeecC
Q 026214          180 -----FGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGA-KCLKSERTEICCVRE  238 (241)
Q Consensus       180 -----~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~~~-~~~~~~~~~~~~~~e  238 (241)
                           ++....|.|||||+.|||+..++.+.|+|+|||....++..... ..-.--+|.-|+|||
T Consensus       326 ~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPE  390 (513)
T KOG2052|consen  326 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPE  390 (513)
T ss_pred             HHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChH
Confidence                 34456799999999999999999999999999998887743322 223344778899998

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=2.7e-29  Score=215.16  Aligned_cols=150  Identities=17%  Similarity=0.177  Sum_probs=134.4

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      ++|...+.||+|+||.||+|.+  ++..||+|.+....   ......+.+|+.++..++||||+++++++.+.+..++||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM   80 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence            3688889999999999999999  68999999987542   234466889999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||+++++|.+++...     ..+++..+..++.|++.||.|||   ..+++||||||+|||++.++.++|+|||++..+.
T Consensus        81 e~~~~~~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH---~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~  152 (350)
T cd05573          81 EYMPGGDLMNLLIRK-----DVFPEETARFYIAELVLALDSVH---KLGFIHRDIKPDNILIDADGHIKLADFGLCKKMN  152 (350)
T ss_pred             cCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEeecCCCCccCc
Confidence            999999999999654     45899999999999999999999   9999999999999999999999999999998775


Q ss_pred             CCC
Q 026214          217 EGG  219 (241)
Q Consensus       217 ~~~  219 (241)
                      ...
T Consensus       153 ~~~  155 (350)
T cd05573         153 KAK  155 (350)
T ss_pred             ccC
Confidence            543

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.96  E-value=6e-29  Score=215.41  Aligned_cols=178  Identities=15%  Similarity=0.205  Sum_probs=142.5

Q ss_pred             HHHhcCCCcCCeeecccceEEEEEEE-------CCeEEEEEEeeccC-CcchhhHHHHHHHHHhc-CCCceeeEeeEEec
Q 026214           58 KLATNNYDQKNVITEDWGCILYKGFW-------QERLISVMRFRESN-RDGHGSCINNIVYAAQM-SHDHILKLIGCCLE  128 (241)
Q Consensus        58 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~  128 (241)
                      ....++|...+.||+|+||.||+|.+       ++..||+|.+.... ....+.+.+|+.++..+ +||||+++++++..
T Consensus        31 ~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~  110 (375)
T cd05104          31 EFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTV  110 (375)
T ss_pred             ccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeecc
Confidence            34455688899999999999999974       45689999987543 22345688999999999 89999999999999


Q ss_pred             CCcceEEEeeCCCCCHHHHHhhcCCC------------------------------------------------------
Q 026214          129 TPIPILAFESVEYGNLRDRILSASQP------------------------------------------------------  154 (241)
Q Consensus       129 ~~~~~lv~e~~~~gsL~~~l~~~~~~------------------------------------------------------  154 (241)
                      .+..++||||+++|+|.+++......                                                      
T Consensus       111 ~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  190 (375)
T cd05104         111 GGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVR  190 (375)
T ss_pred             CCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccc
Confidence            99999999999999999999653110                                                      


Q ss_pred             ----------------CCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          155 ----------------QTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       155 ----------------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                                      ....+++..+..++.|++.||.|||   +.+++||||||+|||++.++.+||+|||+++.+...
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~  267 (375)
T cd05104         191 SGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIRND  267 (375)
T ss_pred             cceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCchhhEEEECCCcEEEecCccceeccCc
Confidence                            1125788899999999999999999   999999999999999999999999999999877554


Q ss_pred             CccccceeecCCceeeeecCC
Q 026214          219 GTSGAKCLKSERTEICCVREN  239 (241)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~e~  239 (241)
                      ..... ......+..|++||-
T Consensus       268 ~~~~~-~~~~~~~~~y~aPE~  287 (375)
T cd05104         268 SNYVV-KGNARLPVKWMAPES  287 (375)
T ss_pred             ccccc-cCCCCCCcceeChhH
Confidence            32211 111223345888883

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.96  E-value=1.4e-28  Score=204.71  Aligned_cols=171  Identities=22%  Similarity=0.268  Sum_probs=141.9

Q ss_pred             cCCCcCCeeecccceEEEEEEE------CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecC--Ccce
Q 026214           62 NNYDQKNVITEDWGCILYKGFW------QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLET--PIPI  133 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~  133 (241)
                      .+|...+.||+|+||.||++..      ++..||+|.+........+.+.+|+.++..++||||+++.+++...  ...+
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   83 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR   83 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence            4577788999999999999974      5788999998776555567789999999999999999999987543  4688


Q ss_pred             EEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCce
Q 026214          134 LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSI  213 (241)
Q Consensus       134 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~  213 (241)
                      +++||+++++|.+++...    ...+++..+..++.|++.||.|||   ..+++|+||||+||+++.++.++|+|||++.
T Consensus        84 lv~e~~~~~~L~~~l~~~----~~~l~~~~~~~~~~~l~~aL~~LH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~~  156 (284)
T cd05081          84 LVMEYLPYGSLRDYLQKH----RERLDHRKLLLYASQICKGMEYLG---SKRYVHRDLATRNILVESENRVKIGDFGLTK  156 (284)
T ss_pred             EEEEecCCCCHHHHHHhc----CcCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHhhEEECCCCeEEECCCcccc
Confidence            999999999999999654    345899999999999999999999   9999999999999999999999999999999


Q ss_pred             ecCCCCccccceeecCCceeeeecCC
Q 026214          214 SIPEGGTSGAKCLKSERTEICCVREN  239 (241)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~e~  239 (241)
                      .+..+.........+..+..|++||-
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~y~aPE~  182 (284)
T cd05081         157 VLPQDKEYYKVREPGESPIFWYAPES  182 (284)
T ss_pred             cccCCCcceeecCCCCCceEeeCHHH
Confidence            87655433222223334456788873

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.96  E-value=7.5e-29  Score=213.60  Aligned_cols=147  Identities=12%  Similarity=0.153  Sum_probs=131.5

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      ++|...+.||+|+||.||++.+  ++..||+|.+....   ......+.+|+.++..++||||+++++.+...+..++||
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~   80 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM   80 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            3577889999999999999998  78999999987532   223456788999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||+++|+|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.++|+|||++..+.
T Consensus        81 E~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~~L~~lH---~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~  152 (360)
T cd05627          81 EFLPGGDMMTLLMKK-----DTLSEEATQFYIAETVLAIDAIH---QLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLK  152 (360)
T ss_pred             eCCCCccHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEeeccCCcccc
Confidence            999999999999654     45889999999999999999999   9999999999999999999999999999998654

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.96  E-value=1.1e-29  Score=215.09  Aligned_cols=165  Identities=24%  Similarity=0.256  Sum_probs=141.5

Q ss_pred             CCcCCeeecccceEEEEEEECCeEEEEEEeeccCCcchhhHHHHHHHHHhc--CCCceeeEeeEEecCC----cceEEEe
Q 026214           64 YDQKNVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQM--SHDHILKLIGCCLETP----IPILAFE  137 (241)
Q Consensus        64 ~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~~~----~~~lv~e  137 (241)
                      ....++||+|.||.||+|.++++.||||++...   ..+.|.+|-+++...  .|+||++++++-....    .+|||++
T Consensus       212 l~l~eli~~Grfg~V~KaqL~~~~VAVKifp~~---~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~  288 (534)
T KOG3653|consen  212 LQLLELIGRGRFGCVWKAQLDNRLVAVKIFPEQ---EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTE  288 (534)
T ss_pred             hhhHHHhhcCccceeehhhccCceeEEEecCHH---HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEee
Confidence            344678999999999999999999999999765   346677887776655  8999999998876544    7999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhC------CCCCCeEEccCCCCCeeEcCCCcEEEccccC
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHF------GFPRPIVYRDFKTAHILFNEENVAKMFDFSL  211 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~------~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~  211 (241)
                      |.+.|||.++|..+      .++|....+++..+++||+|||+      +...+|+|||||++|||+..++++.|+|||+
T Consensus       289 fh~kGsL~dyL~~n------tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGL  362 (534)
T KOG3653|consen  289 FHPKGSLCDYLKAN------TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGL  362 (534)
T ss_pred             eccCCcHHHHHHhc------cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccce
Confidence            99999999999554      58999999999999999999994      4456899999999999999999999999999


Q ss_pred             ceecCCCCccccceeecCCceeeeecC
Q 026214          212 SISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       212 a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |.++.++.....+.. .-+|.-|+|||
T Consensus       363 Al~~~p~~~~~d~~~-qVGT~RYMAPE  388 (534)
T KOG3653|consen  363 ALRLEPGKPQGDTHG-QVGTRRYMAPE  388 (534)
T ss_pred             eEEecCCCCCcchhh-hhhhhhhcCHH
Confidence            999987665544443 66888999998

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.96  E-value=1.1e-28  Score=220.08  Aligned_cols=170  Identities=16%  Similarity=0.122  Sum_probs=141.1

Q ss_pred             CCcCCeeecccceEEEEEEE--C-CeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCC
Q 026214           64 YDQKNVITEDWGCILYKGFW--Q-ERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVE  140 (241)
Q Consensus        64 ~~~~~~lg~G~~g~Vy~~~~--~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~  140 (241)
                      |...+.||.|++|.||+|..  + +..|++|.+..........+.+|+.+++.++||||+++++++...+..++||||++
T Consensus        69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~  148 (478)
T PTZ00267         69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGS  148 (478)
T ss_pred             EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCC
Confidence            77889999999999999988  4 67888887755543444567889999999999999999999999999999999999


Q ss_pred             CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCc
Q 026214          141 YGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGT  220 (241)
Q Consensus       141 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~  220 (241)
                      +|+|.+++..... ...++++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++.+.....
T Consensus       149 gg~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~  224 (478)
T PTZ00267        149 GGDLNKQIKQRLK-EHLPFQEYEVGLLFYQIVLALDEVH---SRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS  224 (478)
T ss_pred             CCCHHHHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCccc
Confidence            9999998865311 2456889999999999999999999   99999999999999999999999999999998754322


Q ss_pred             cccceeecCCceeeeecC
Q 026214          221 SGAKCLKSERTEICCVRE  238 (241)
Q Consensus       221 ~~~~~~~~~~~~~~~~~e  238 (241)
                      .. ......++..|++||
T Consensus       225 ~~-~~~~~~gt~~y~aPE  241 (478)
T PTZ00267        225 LD-VASSFCGTPYYLAPE  241 (478)
T ss_pred             cc-cccccCCCccccCHh
Confidence            11 111222456788988

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.96  E-value=1.5e-29  Score=190.86  Aligned_cols=148  Identities=20%  Similarity=0.283  Sum_probs=133.8

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeecc--CCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRES--NRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      +|+..++||+|.||+|+++..  ++..||+|+++.+  +.......++|+.+++.++|.|||+++++..++...-||+||
T Consensus         3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~   82 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF   82 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence            466678999999999999998  7889999998754  334467899999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      |. .+|..+....    .+.++...+..++.|+++||.|+|   +.+++|||+||.|.||+.+|.+|++|||+|+.++-+
T Consensus        83 cd-qdlkkyfdsl----ng~~d~~~~rsfmlqllrgl~fch---shnvlhrdlkpqnllin~ngelkladfglarafgip  154 (292)
T KOG0662|consen   83 CD-QDLKKYFDSL----NGDLDPEIVRSFMLQLLRGLGFCH---SHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIP  154 (292)
T ss_pred             hh-HHHHHHHHhc----CCcCCHHHHHHHHHHHHhhhhhhh---hhhhhhccCCcceEEeccCCcEEecccchhhhcCCc
Confidence            97 5999988766    456899999999999999999999   999999999999999999999999999999988765

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.96  E-value=1.4e-28  Score=203.19  Aligned_cols=168  Identities=14%  Similarity=0.189  Sum_probs=139.6

Q ss_pred             cCCCcCCeeecccceEEEEEEE-----CCeEEEEEEeeccCC-cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW-----QERLISVMRFRESNR-DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA  135 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  135 (241)
                      ++|...+.||+|+||.||+|.+     .+..||+|.++.... .....+.+|+..+..++||||+++++++...+..++|
T Consensus         5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   84 (266)
T cd05064           5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV   84 (266)
T ss_pred             HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence            4577889999999999999986     356899999876532 2235688999999999999999999999999999999


Q ss_pred             EeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceec
Q 026214          136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI  215 (241)
Q Consensus       136 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~  215 (241)
                      |||+++|+|.+++...    ...+++..++.++.|++.||.|||   +.+++|+||||+||+++.++.++++|||.+...
T Consensus        85 ~e~~~~~~L~~~l~~~----~~~l~~~~~~~~~~~i~~al~~lH---~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~  157 (266)
T cd05064          85 TEYMSNGALDSFLRKH----EGQLVAGQLMGMLPGLASGMKYLS---EMGYVHKGLAAHKVLVNSDLVCKISGFRRLQED  157 (266)
T ss_pred             EEeCCCCcHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHH---HCCEeeccccHhhEEEcCCCcEEECCCcccccc
Confidence            9999999999999654    346899999999999999999999   999999999999999999999999999987654


Q ss_pred             CCCCccccceeecCCceeeeecC
Q 026214          216 PEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ......  ....+..+..|.+||
T Consensus       158 ~~~~~~--~~~~~~~~~~y~aPE  178 (266)
T cd05064         158 KSEAIY--TTMSGKSPVLWAAPE  178 (266)
T ss_pred             cccchh--cccCCCCceeecCHH
Confidence            332211  112333445678888

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.96  E-value=1.7e-28  Score=209.26  Aligned_cols=168  Identities=14%  Similarity=0.089  Sum_probs=140.7

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      ++|...++||+|+||.||++.+  ++..+|+|.+....   ......+.+|+.++..++|+||+++++++.+.+..++||
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM   80 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence            3577889999999999999998  67889999986521   122345788999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||+++|+|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.++|+|||++..+.
T Consensus        81 ey~~~g~L~~~l~~~----~~~l~~~~~~~~~~qi~~al~~lH---~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~  153 (332)
T cd05623          81 DYYVGGDLLTLLSKF----EDRLPEDMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLM  153 (332)
T ss_pred             eccCCCcHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEeecchheecc
Confidence            999999999999664    345889999999999999999999   9999999999999999999999999999998765


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .+......  ...++..|++||
T Consensus       154 ~~~~~~~~--~~~gt~~y~aPE  173 (332)
T cd05623         154 EDGTVQSS--VAVGTPDYISPE  173 (332)
T ss_pred             cCCcceec--ccccCccccCHH
Confidence            44332221  223455678887

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.96  E-value=9.7e-30  Score=228.42  Aligned_cols=153  Identities=25%  Similarity=0.356  Sum_probs=135.1

Q ss_pred             cCCCcCCeeecccceEEEEEEE-------CCeEEEEEEeeccCCc-chhhHHHHHHHHHhcCCCceeeEeeEEecCCcce
Q 026214           62 NNYDQKNVITEDWGCILYKGFW-------QERLISVMRFRESNRD-GHGSCINNIVYAAQMSHDHILKLIGCCLETPIPI  133 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  133 (241)
                      .+....+.||+|.||.||+|..       +...||||.++..... ..++|.+|+++++.++|||||+|+|+|..++..+
T Consensus       486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~  565 (774)
T KOG1026|consen  486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLC  565 (774)
T ss_pred             hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeE
Confidence            4445567899999999999987       3467999999987655 5688999999999999999999999999999999


Q ss_pred             EEEeeCCCCCHHHHHhhcCC--------C-CCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcE
Q 026214          134 LAFESVEYGNLRDRILSASQ--------P-QTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVA  204 (241)
Q Consensus       134 lv~e~~~~gsL~~~l~~~~~--------~-~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~  204 (241)
                      +|||||..|+|.++|.....        . .+.+++..+.+.|+.||+.||.||-   +..+|||||-++|+||.++..+
T Consensus       566 MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs---~~~FVHRDLATRNCLVge~l~V  642 (774)
T KOG1026|consen  566 MVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLS---SHHFVHRDLATRNCLVGENLVV  642 (774)
T ss_pred             EEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCcccccchhhhhceeccceEE
Confidence            99999999999999975321        1 1455899999999999999999999   9999999999999999999999


Q ss_pred             EEccccCceecCC
Q 026214          205 KMFDFSLSISIPE  217 (241)
Q Consensus       205 ki~DfG~a~~~~~  217 (241)
                      ||+|||+++.+=+
T Consensus       643 KIsDfGLsRdiYs  655 (774)
T KOG1026|consen  643 KISDFGLSRDIYS  655 (774)
T ss_pred             Eecccccchhhhh
Confidence            9999999996543

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.96  E-value=1.6e-28  Score=208.61  Aligned_cols=160  Identities=18%  Similarity=0.174  Sum_probs=134.0

Q ss_pred             CeeecccceEEEEEEE-----CCeEEEEEEeeccC----CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           68 NVITEDWGCILYKGFW-----QERLISVMRFRESN----RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      +.||+|+||.||++..     ++..||+|.+....    ......+.+|+.+++.++||||+++++++..++..+++|||
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~   81 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY   81 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence            5799999999999986     56889999987532    12335578899999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      +++++|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus        82 ~~~~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  153 (323)
T cd05584          82 LSGGELFMHLERE-----GIFMEDTACFYLSEISLALEHLH---QQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHE  153 (323)
T ss_pred             CCCchHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccC
Confidence            9999999999554     45788888999999999999999   999999999999999999999999999999865433


Q ss_pred             CccccceeecCCceeeeecC
Q 026214          219 GTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .....   ...++..|+|||
T Consensus       154 ~~~~~---~~~gt~~y~aPE  170 (323)
T cd05584         154 GTVTH---TFCGTIEYMAPE  170 (323)
T ss_pred             CCccc---ccCCCccccChh
Confidence            32211   123456788888

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>PHA02988 hypothetical protein; Provisional

Probab=99.96  E-value=3.7e-28  Score=202.73  Aligned_cols=158  Identities=19%  Similarity=0.300  Sum_probs=133.9

Q ss_pred             CccccCHHHHHHHhcCCCcCCeeecccceEEEEEEECCeEEEEEEeeccCCcc---hhhHHHHHHHHHhcCCCceeeEee
Q 026214           48 PYRIFSAQELKLATNNYDQKNVITEDWGCILYKGFWQERLISVMRFRESNRDG---HGSCINNIVYAAQMSHDHILKLIG  124 (241)
Q Consensus        48 ~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~  124 (241)
                      .++.++.+++.     ......|++|++|.||+|.+++..||+|.+.......   .+.+.+|+.++.+++||||+++++
T Consensus        11 ~~~~i~~~~i~-----~~~~~~i~~g~~~~v~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g   85 (283)
T PHA02988         11 DIKCIESDDID-----KYTSVLIKENDQNSIYKGIFNNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYG   85 (283)
T ss_pred             cceecCHHHcC-----CCCCeEEeeCCceEEEEEEECCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEee
Confidence            44556666663     3334689999999999999999999999987654322   466789999999999999999999


Q ss_pred             EEec----CCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCC-CCeEEccCCCCCeeEc
Q 026214          125 CCLE----TPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFP-RPIVYRDFKTAHILFN  199 (241)
Q Consensus       125 ~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~-~~ivH~dlk~~Nill~  199 (241)
                      ++.+    ....+++|||+++|+|.+++...     ..+++.....++.+++.||.|||   . .+++||||||+|||++
T Consensus        86 ~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~-----~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~Hrdlkp~nill~  157 (283)
T PHA02988         86 FIIDIVDDLPRLSLILEYCTRGYLREVLDKE-----KDLSFKTKLDMAIDCCKGLYNLY---KYTNKPYKNLTSVSFLVT  157 (283)
T ss_pred             eEEecccCCCceEEEEEeCCCCcHHHHHhhC-----CCCChhHHHHHHHHHHHHHHHHH---hcCCCCCCcCChhhEEEC
Confidence            9876    34688999999999999999654     35888999999999999999999   6 4889999999999999


Q ss_pred             CCCcEEEccccCceecCCC
Q 026214          200 EENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       200 ~~~~~ki~DfG~a~~~~~~  218 (241)
                      .++.+||+|||+++.+..+
T Consensus       158 ~~~~~kl~dfg~~~~~~~~  176 (283)
T PHA02988        158 ENYKLKIICHGLEKILSSP  176 (283)
T ss_pred             CCCcEEEcccchHhhhccc
Confidence            9999999999999876543

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.96  E-value=1.5e-28  Score=209.40  Aligned_cols=166  Identities=16%  Similarity=0.113  Sum_probs=138.8

Q ss_pred             CCCcCCeeecccceEEEEEEE-----CCeEEEEEEeeccC----CcchhhHHHHHHHHHhc-CCCceeeEeeEEecCCcc
Q 026214           63 NYDQKNVITEDWGCILYKGFW-----QERLISVMRFRESN----RDGHGSCINNIVYAAQM-SHDHILKLIGCCLETPIP  132 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~  132 (241)
                      +|...+.||+|+||.||++..     ++..||+|.+....    ......+..|+.++..+ +||||+++++++...+..
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL   80 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence            477789999999999999876     57889999987532    12345678899999999 599999999999999999


Q ss_pred             eEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCc
Q 026214          133 ILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS  212 (241)
Q Consensus       133 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a  212 (241)
                      +++|||+++|+|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++
T Consensus        81 ~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nili~~~~~~kl~DfG~~  152 (332)
T cd05614          81 HLILDYVSGGEMFTHLYQR-----DNFSEDEVRFYSGEIILALEHLH---KLGIVYRDIKLENILLDSEGHVVLTDFGLS  152 (332)
T ss_pred             EEEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHeEECCCCCEEEeeCcCC
Confidence            9999999999999999654     45889999999999999999999   999999999999999999999999999999


Q ss_pred             eecCCCCccccceeecCCceeeeecC
Q 026214          213 ISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +.+..........  ..++..|++||
T Consensus       153 ~~~~~~~~~~~~~--~~gt~~y~aPE  176 (332)
T cd05614         153 KEFLSEEKERTYS--FCGTIEYMAPE  176 (332)
T ss_pred             ccccccCCCcccc--ccCCccccCHH
Confidence            8765443322222  23455678887

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.96  E-value=8.7e-30  Score=203.03  Aligned_cols=166  Identities=21%  Similarity=0.308  Sum_probs=144.0

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC----cc----hhhHHHHHHHHHhc-CCCceeeEeeEEecC
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR----DG----HGSCINNIVYAAQM-SHDHILKLIGCCLET  129 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~----~~----~~~~~~E~~~l~~l-~h~niv~l~~~~~~~  129 (241)
                      -+.|...+.||.|..++|-++..  ++...|+|++.....    ..    .++..+|+.+|+++ -||+|+++.++|.++
T Consensus        16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~   95 (411)
T KOG0599|consen   16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD   95 (411)
T ss_pred             HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence            35677888999999999999988  889999998864321    11    24467899999999 799999999999999


Q ss_pred             CcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccc
Q 026214          130 PIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDF  209 (241)
Q Consensus       130 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~Df  209 (241)
                      .+.++|+|.|+.|.|.|++...     -.+++.....|+.|+..|+.|||   ..+||||||||+|||+|++.+++|+||
T Consensus        96 sF~FlVFdl~prGELFDyLts~-----VtlSEK~tR~iMrqlfegVeylH---a~~IVHRDLKpENILlddn~~i~isDF  167 (411)
T KOG0599|consen   96 AFVFLVFDLMPRGELFDYLTSK-----VTLSEKETRRIMRQLFEGVEYLH---ARNIVHRDLKPENILLDDNMNIKISDF  167 (411)
T ss_pred             chhhhhhhhcccchHHHHhhhh-----eeecHHHHHHHHHHHHHHHHHHH---HhhhhhcccChhheeeccccceEEecc
Confidence            9999999999999999999654     45899999999999999999999   999999999999999999999999999


Q ss_pred             cCceecCCCCccccceeecCCceeeeecC
Q 026214          210 SLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       210 G~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |+|..+++++.....|    +++.|.|||
T Consensus       168 GFa~~l~~GekLrelC----GTPgYLAPE  192 (411)
T KOG0599|consen  168 GFACQLEPGEKLRELC----GTPGYLAPE  192 (411)
T ss_pred             ceeeccCCchhHHHhc----CCCcccChh
Confidence            9999999987766544    455677777

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=2.7e-28  Score=203.54  Aligned_cols=166  Identities=18%  Similarity=0.221  Sum_probs=139.1

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC---cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEe
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR---DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFE  137 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  137 (241)
                      +|...+.||+|+||.||++.+  ++..||+|.+.....   .....+.+|+.+++.++||||+++++++..++..+++||
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence            367778999999999999998  789999999875421   223457889999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCC
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE  217 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~  217 (241)
                      |+++++|.+++...   ....+++..+..++.|++.||.|||   +.+++|+||||+||++++++.++|+|||++..+..
T Consensus        81 ~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~  154 (285)
T cd05605          81 LMNGGDLKFHIYNM---GNPGFDEERAVFYAAEITCGLEDLH---RERIVYRDLKPENILLDDYGHIRISDLGLAVEIPE  154 (285)
T ss_pred             ccCCCcHHHHHHhc---CcCCCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHEEECCCCCEEEeeCCCceecCC
Confidence            99999999988654   2345899999999999999999999   99999999999999999999999999999987654


Q ss_pred             CCccccceeecCCceeeeecC
Q 026214          218 GGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .....    ...++..|++||
T Consensus       155 ~~~~~----~~~~~~~y~aPE  171 (285)
T cd05605         155 GETIR----GRVGTVGYMAPE  171 (285)
T ss_pred             CCccc----cccCCCCccCcH
Confidence            33211    112345677777

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.96  E-value=2.4e-28  Score=201.83  Aligned_cols=166  Identities=17%  Similarity=0.194  Sum_probs=131.5

Q ss_pred             eeecccceEEEEEEE----CCeEEEEEEeeccCC-cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCCCCC
Q 026214           69 VITEDWGCILYKGFW----QERLISVMRFRESNR-DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGN  143 (241)
Q Consensus        69 ~lg~G~~g~Vy~~~~----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs  143 (241)
                      .||+|+||.||+|..    ....+++|.+..... .....+.+|+.+++.++||||+++++++......+++|||+++|+
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~   81 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD   81 (269)
T ss_pred             cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence            689999999999976    345688887764332 223568899999999999999999999999999999999999999


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCcccc
Q 026214          144 LRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGA  223 (241)
Q Consensus       144 L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~~~  223 (241)
                      |.+++...........++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++.....+.....
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~  158 (269)
T cd05042          82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLH---QADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYIT  158 (269)
T ss_pred             HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHH---hcCEecccccHhheEecCCCcEEEeccccccccccchheec
Confidence            999997753222334567888899999999999999   99999999999999999999999999999976544322111


Q ss_pred             ceeecCCceeeeecC
Q 026214          224 KCLKSERTEICCVRE  238 (241)
Q Consensus       224 ~~~~~~~~~~~~~~e  238 (241)
                      . .....+..|++||
T Consensus       159 ~-~~~~~~~~y~aPE  172 (269)
T cd05042         159 K-DCHAVPLRWLAPE  172 (269)
T ss_pred             c-CCCCCcccccCHH
Confidence            1 1112233467777

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.96  E-value=1.7e-28  Score=208.54  Aligned_cols=163  Identities=20%  Similarity=0.216  Sum_probs=133.4

Q ss_pred             CCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHH---HhcCCCceeeEeeEEecCCcceEE
Q 026214           64 YDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYA---AQMSHDHILKLIGCCLETPIPILA  135 (241)
Q Consensus        64 ~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l---~~l~h~niv~l~~~~~~~~~~~lv  135 (241)
                      |...+.||+|+||.||+|.+  ++..||+|.+....   ......+.+|+.++   ..++||||+++++++...+..++|
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv   80 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV   80 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence            45678999999999999998  78999999997542   22334566676654   566899999999999999999999


Q ss_pred             EeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceec
Q 026214          136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI  215 (241)
Q Consensus       136 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~  215 (241)
                      |||+++++|...+.      ...+++..+..++.|++.||.|||   +.+++||||||+||+++.++.+||+|||++...
T Consensus        81 ~E~~~~~~L~~~~~------~~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~  151 (324)
T cd05589          81 MEYAAGGDLMMHIH------TDVFSEPRAVFYAACVVLGLQYLH---ENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEG  151 (324)
T ss_pred             EcCCCCCcHHHHhh------cCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCcEEeCcccCCccC
Confidence            99999999998883      345899999999999999999999   999999999999999999999999999998764


Q ss_pred             CCCCccccceeecCCceeeeecC
Q 026214          216 PEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .......   ....++..|++||
T Consensus       152 ~~~~~~~---~~~~g~~~y~aPE  171 (324)
T cd05589         152 MGFGDRT---STFCGTPEFLAPE  171 (324)
T ss_pred             CCCCCcc---cccccCccccCHh
Confidence            3332211   1223445678887

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.96  E-value=2.1e-28  Score=207.28  Aligned_cols=160  Identities=17%  Similarity=0.178  Sum_probs=131.6

Q ss_pred             CeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhc-CCCceeeEeeEEecCCcceEEEeeCCC
Q 026214           68 NVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQM-SHDHILKLIGCCLETPIPILAFESVEY  141 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~  141 (241)
                      +.||+|+||.||+|.+  ++..||+|.+....   ......+..|..++..+ +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g   80 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            4699999999999998  67889999987542   22344566777777655 899999999999999999999999999


Q ss_pred             CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCcc
Q 026214          142 GNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTS  221 (241)
Q Consensus       142 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~  221 (241)
                      |+|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++.........
T Consensus        81 g~L~~~~~~~-----~~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~  152 (316)
T cd05592          81 GDLMFHIQSS-----GRFDEARARFYAAEIICGLQFLH---KKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGK  152 (316)
T ss_pred             CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCc
Confidence            9999998554     35889999999999999999999   999999999999999999999999999999865433221


Q ss_pred             ccceeecCCceeeeecC
Q 026214          222 GAKCLKSERTEICCVRE  238 (241)
Q Consensus       222 ~~~~~~~~~~~~~~~~e  238 (241)
                      ..   ...++..|++||
T Consensus       153 ~~---~~~gt~~y~aPE  166 (316)
T cd05592         153 AS---TFCGTPDYIAPE  166 (316)
T ss_pred             cc---cccCCccccCHH
Confidence            11   122455678887

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.96  E-value=1.7e-29  Score=224.52  Aligned_cols=170  Identities=18%  Similarity=0.213  Sum_probs=152.2

Q ss_pred             CCCcCCeeecccceEEEEEEE-----CCeEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           63 NYDQKNVITEDWGCILYKGFW-----QERLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      ...++++||.|.||.||+|.+     ....||||.++... ......|+.|..+|.+++||||++|.|+.......++|+
T Consensus       630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiT  709 (996)
T KOG0196|consen  630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIIT  709 (996)
T ss_pred             heEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEh
Confidence            345678999999999999998     34679999998754 345577999999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      |||++|+|+.+|..+    .+.+++..+..++++|+.||.||-   ++++|||||.++|||++.+..+||+|||+++.++
T Consensus       710 EyMENGsLDsFLR~~----DGqftviQLVgMLrGIAsGMkYLs---dm~YVHRDLAARNILVNsnLvCKVsDFGLSRvle  782 (996)
T KOG0196|consen  710 EYMENGSLDSFLRQN----DGQFTVIQLVGMLRGIASGMKYLS---DMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLE  782 (996)
T ss_pred             hhhhCCcHHHHHhhc----CCceEeehHHHHHHHHHHHhHHHh---hcCchhhhhhhhheeeccceEEEeccccceeecc
Confidence            999999999999887    456999999999999999999999   9999999999999999999999999999999988


Q ss_pred             CCCccccceeecCCceeeeecCC
Q 026214          217 EGGTSGAKCLKSERTEICCVREN  239 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e~  239 (241)
                      .+.....++..|-.+--|-|||-
T Consensus       783 dd~~~~ytt~GGKIPiRWTAPEA  805 (996)
T KOG0196|consen  783 DDPEAAYTTLGGKIPIRWTAPEA  805 (996)
T ss_pred             cCCCccccccCCccceeecChhH
Confidence            77766666777888888888884

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.96  E-value=3e-28  Score=207.62  Aligned_cols=165  Identities=16%  Similarity=0.204  Sum_probs=140.3

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC-cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEe
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR-DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFE  137 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  137 (241)
                      .++|...+.||+|+||.||++.+  ++..+|+|.+..... .....+.+|+.++..++||||+++++++..++..+++||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence            36788889999999999999999  788899998875432 234678999999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCC-CeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPR-PIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~-~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      |+++++|.+++...     ..+++..+..++.|++.||.|||   +. +|+|+||||+|||++.++.++|+|||++..+.
T Consensus        84 ~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH---~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  155 (331)
T cd06649          84 HMDGGSLDQVLKEA-----KRIPEEILGKVSIAVLRGLAYLR---EKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI  155 (331)
T ss_pred             cCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHh---hcCCEEcCCCChhhEEEcCCCcEEEccCccccccc
Confidence            99999999999654     34889999999999999999999   65 69999999999999999999999999998764


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .....     ...++..|.+||
T Consensus       156 ~~~~~-----~~~g~~~y~aPE  172 (331)
T cd06649         156 DSMAN-----SFVGTRSYMSPE  172 (331)
T ss_pred             ccccc-----cCCCCcCcCCHh
Confidence            43211     123455678887

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.96  E-value=2.7e-28  Score=203.04  Aligned_cols=162  Identities=16%  Similarity=0.201  Sum_probs=135.0

Q ss_pred             eecccceEEEEEEE--CCeEEEEEEeeccCC---cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCCCCCH
Q 026214           70 ITEDWGCILYKGFW--QERLISVMRFRESNR---DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNL  144 (241)
Q Consensus        70 lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL  144 (241)
                      ||+|+||.||++.+  ++..||+|.+.....   .....+..|+.+++.++||||+++.+++......+++|||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            68999999999998  788999999875421   2235678899999999999999999999999999999999999999


Q ss_pred             HHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCccccc
Q 026214          145 RDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAK  224 (241)
Q Consensus       145 ~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~~~~  224 (241)
                      .+.+..... ....+++..+..++.|++.||.|||   +.+|+||||||+||+++.++.++|+|||++..+........ 
T Consensus        81 ~~~~~~~~~-~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~-  155 (280)
T cd05608          81 RYHIYNVDE-ENPGFPEPRACFYTAQIISGLEHLH---QRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTK-  155 (280)
T ss_pred             HHHHHhccc-cCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCcccc-
Confidence            988854321 2456899999999999999999999   99999999999999999999999999999987755432211 


Q ss_pred             eeecCCceeeeecC
Q 026214          225 CLKSERTEICCVRE  238 (241)
Q Consensus       225 ~~~~~~~~~~~~~e  238 (241)
                        ...++..|++||
T Consensus       156 --~~~g~~~y~aPE  167 (280)
T cd05608         156 --GYAGTPGFMAPE  167 (280)
T ss_pred             --ccCCCcCccCHH
Confidence              123445678887

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.96  E-value=2.2e-28  Score=207.56  Aligned_cols=160  Identities=18%  Similarity=0.194  Sum_probs=133.3

Q ss_pred             CeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhc-CCCceeeEeeEEecCCcceEEEeeCCC
Q 026214           68 NVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQM-SHDHILKLIGCCLETPIPILAFESVEY  141 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~  141 (241)
                      +.||+|+||.||+|.+  ++..||+|.+....   ......+..|..++..+ +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   80 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG   80 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence            4689999999999998  67899999987642   22345677888888876 899999999999999999999999999


Q ss_pred             CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCcc
Q 026214          142 GNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTS  221 (241)
Q Consensus       142 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~  221 (241)
                      ++|...+...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.++|+|||++.........
T Consensus        81 ~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~  152 (321)
T cd05591          81 GDLMFQIQRS-----RKFDEPRSRFYAAEVTLALMFLH---RHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVT  152 (321)
T ss_pred             CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeecccceecccCCcc
Confidence            9999988554     35889999999999999999999   999999999999999999999999999999865433222


Q ss_pred             ccceeecCCceeeeecC
Q 026214          222 GAKCLKSERTEICCVRE  238 (241)
Q Consensus       222 ~~~~~~~~~~~~~~~~e  238 (241)
                      ..   ...++..|+|||
T Consensus       153 ~~---~~~gt~~y~aPE  166 (321)
T cd05591         153 TT---TFCGTPDYIAPE  166 (321)
T ss_pred             cc---ccccCccccCHH
Confidence            11   223455678887

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.96  E-value=2.2e-28  Score=203.81  Aligned_cols=167  Identities=18%  Similarity=0.267  Sum_probs=138.0

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEe
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFE  137 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  137 (241)
                      ++|...+.||+|+||.||+|.+  ++..||+|++....  ....+.+.+|+.++..++||||+++++++..++..++|||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE   80 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence            3688889999999999999999  68899999987543  2234668899999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCC
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE  217 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~  217 (241)
                      |++++++..+. ..    ...+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.+||+|||++..+..
T Consensus        81 ~~~~~~l~~~~-~~----~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~  152 (287)
T cd07848          81 YVEKNMLELLE-EM----PNGVPPEKVRSYIYQLIKAIHWCH---KNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSE  152 (287)
T ss_pred             cCCCCHHHHHH-hc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccCcccccc
Confidence            99976665443 22    345889999999999999999999   99999999999999999999999999999988754


Q ss_pred             CCccccceeecCCceeeeecC
Q 026214          218 GGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .......  ...++..|.+||
T Consensus       153 ~~~~~~~--~~~~~~~y~aPE  171 (287)
T cd07848         153 GSNANYT--EYVATRWYRSPE  171 (287)
T ss_pred             ccccccc--ccccccccCCcH
Confidence            3322211  122345678887

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.96  E-value=3.7e-28  Score=206.41  Aligned_cols=165  Identities=19%  Similarity=0.204  Sum_probs=136.2

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhcCC-CceeeEeeEEecCCcceEEE
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQMSH-DHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv~  136 (241)
                      +|...+.||+|+||.||+|.+  ++..||+|.+....   ......+..|..++..+.| ++|+++++++...+..++||
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM   80 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence            467788999999999999998  67899999987542   2344668889999999966 56888999999899999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||+++|+|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.++|+|||++....
T Consensus        81 E~~~~g~L~~~~~~~-----~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~  152 (324)
T cd05587          81 EYVNGGDLMYHIQQV-----GKFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENI  152 (324)
T ss_pred             cCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEEcCCCCEEEeecCcceecC
Confidence            999999999998554     34889999999999999999999   9999999999999999999999999999987543


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .....   .....++..|++||
T Consensus       153 ~~~~~---~~~~~gt~~y~aPE  171 (324)
T cd05587         153 FGGKT---TRTFCGTPDYIAPE  171 (324)
T ss_pred             CCCCc---eeeecCCccccChh
Confidence            22211   11223456678887

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.96  E-value=2.9e-28  Score=207.58  Aligned_cols=160  Identities=21%  Similarity=0.216  Sum_probs=132.9

Q ss_pred             CeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhc-CCCceeeEeeEEecCCcceEEEeeCCC
Q 026214           68 NVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQM-SHDHILKLIGCCLETPIPILAFESVEY  141 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~  141 (241)
                      +.||+|+||.||++.+  ++..||+|.+....   ......+.+|+.++..+ +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~   80 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   80 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence            4699999999999998  78899999987642   22345577888888777 899999999999999999999999999


Q ss_pred             CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCcc
Q 026214          142 GNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTS  221 (241)
Q Consensus       142 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~  221 (241)
                      ++|..++...     ..+++..+..++.|++.||.|||   +.+|+||||||+||+++.++.+||+|||+++........
T Consensus        81 ~~L~~~~~~~-----~~l~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~  152 (329)
T cd05618          81 GDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT  152 (329)
T ss_pred             CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCc
Confidence            9999888543     45899999999999999999999   999999999999999999999999999999864332221


Q ss_pred             ccceeecCCceeeeecC
Q 026214          222 GAKCLKSERTEICCVRE  238 (241)
Q Consensus       222 ~~~~~~~~~~~~~~~~e  238 (241)
                      .   ....++..|++||
T Consensus       153 ~---~~~~gt~~y~aPE  166 (329)
T cd05618         153 T---STFCGTPNYIAPE  166 (329)
T ss_pred             c---ccccCCccccCHH
Confidence            1   1123455677887

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.96  E-value=2e-28  Score=212.05  Aligned_cols=177  Identities=16%  Similarity=0.256  Sum_probs=141.5

Q ss_pred             HHHhcCCCcCCeeecccceEEEEEEE-------CCeEEEEEEeeccCC-cchhhHHHHHHHHHhc-CCCceeeEeeEEec
Q 026214           58 KLATNNYDQKNVITEDWGCILYKGFW-------QERLISVMRFRESNR-DGHGSCINNIVYAAQM-SHDHILKLIGCCLE  128 (241)
Q Consensus        58 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~  128 (241)
                      ....++|...+.||+|+||.||+|.+       +...||+|.+..... .....+.+|+.+++.+ +||||+++++++..
T Consensus        34 ~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~  113 (374)
T cd05106          34 EFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTH  113 (374)
T ss_pred             cccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecC
Confidence            34455788899999999999999985       235799999875432 2345688999999999 89999999999999


Q ss_pred             CCcceEEEeeCCCCCHHHHHhhcCC-------------------------------------------------------
Q 026214          129 TPIPILAFESVEYGNLRDRILSASQ-------------------------------------------------------  153 (241)
Q Consensus       129 ~~~~~lv~e~~~~gsL~~~l~~~~~-------------------------------------------------------  153 (241)
                      .+..+++|||+++|+|.+++.....                                                       
T Consensus       114 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (374)
T cd05106         114 GGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQ  193 (374)
T ss_pred             CCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccc
Confidence            9999999999999999999864310                                                       


Q ss_pred             ----------CCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCcccc
Q 026214          154 ----------PQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGA  223 (241)
Q Consensus       154 ----------~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~~~  223 (241)
                                ....++++..+..++.|++.||.|||   +.+++||||||+|||+++++.++|+|||+++.+..+.....
T Consensus       194 ~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~  270 (374)
T cd05106         194 SSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLA---SKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVV  270 (374)
T ss_pred             cccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceee
Confidence                      01234788889999999999999999   99999999999999999999999999999987755432211


Q ss_pred             ceeecCCceeeeecC
Q 026214          224 KCLKSERTEICCVRE  238 (241)
Q Consensus       224 ~~~~~~~~~~~~~~e  238 (241)
                       ......+..|++||
T Consensus       271 -~~~~~~~~~y~aPE  284 (374)
T cd05106         271 -KGNARLPVKWMAPE  284 (374)
T ss_pred             -ccCCCCccceeCHH
Confidence             11112234588888

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.96  E-value=4.5e-28  Score=199.34  Aligned_cols=170  Identities=16%  Similarity=0.278  Sum_probs=142.8

Q ss_pred             HhcCCCcCCeeecccceEEEEEEE-CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           60 ATNNYDQKNVITEDWGCILYKGFW-QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      ..++|...+.||.|++|.||+|.+ ++..||+|.+.... ...+.+.+|+.++++++||||+++++++...+..+++|||
T Consensus         4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   82 (261)
T cd05068           4 DRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTEL   82 (261)
T ss_pred             chhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeec
Confidence            345688889999999999999998 66789999987654 3456789999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      +++++|.+++...   ....+++..+..++.|++.||.|||   ..+++|+||+|+||+++.++.++|+|||++..+..+
T Consensus        83 ~~~~~L~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~  156 (261)
T cd05068          83 MKYGSLLEYLQGG---AGRALKLPQLIDMAAQVASGMAYLE---AQNYIHRDLAARNVLVGENNICKVADFGLARVIKED  156 (261)
T ss_pred             ccCCcHHHHHhcc---CCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCcceEEEcCCCCEEECCcceEEEccCC
Confidence            9999999999665   2345899999999999999999999   999999999999999999999999999999987643


Q ss_pred             CccccceeecCCceeeeecC
Q 026214          219 GTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .....  .....+..|++||
T Consensus       157 ~~~~~--~~~~~~~~y~aPE  174 (261)
T cd05068         157 IYEAR--EGAKFPIKWTAPE  174 (261)
T ss_pred             ccccc--CCCcCceeccCcc
Confidence            22111  1112234677887

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.96  E-value=3.1e-28  Score=207.36  Aligned_cols=160  Identities=19%  Similarity=0.195  Sum_probs=133.5

Q ss_pred             CeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhc-CCCceeeEeeEEecCCcceEEEeeCCC
Q 026214           68 NVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQM-SHDHILKLIGCCLETPIPILAFESVEY  141 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~  141 (241)
                      +.||+|+||.||++.+  ++..||+|.++...   ......+..|..++..+ +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~   80 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG   80 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            4689999999999998  78899999998642   22345578899999988 799999999999999999999999999


Q ss_pred             CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCcc
Q 026214          142 GNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTS  221 (241)
Q Consensus       142 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~  221 (241)
                      |+|.+++...     ..+++..+..++.|++.||.|||   +.+++||||||+|||++.++.+||+|||+++........
T Consensus        81 g~L~~~~~~~-----~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~  152 (329)
T cd05588          81 GDLMFHMQRQ-----RKLPEEHARFYSAEISLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDT  152 (329)
T ss_pred             CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEECcCccccccccCCCc
Confidence            9999888543     45899999999999999999999   999999999999999999999999999999753222211


Q ss_pred             ccceeecCCceeeeecC
Q 026214          222 GAKCLKSERTEICCVRE  238 (241)
Q Consensus       222 ~~~~~~~~~~~~~~~~e  238 (241)
                      .   ....++..|++||
T Consensus       153 ~---~~~~gt~~y~aPE  166 (329)
T cd05588         153 T---STFCGTPNYIAPE  166 (329)
T ss_pred             c---ccccCCccccCHH
Confidence            1   1223455678887

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.96  E-value=3.8e-28  Score=207.20  Aligned_cols=165  Identities=16%  Similarity=0.204  Sum_probs=139.4

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEe
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFE  137 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  137 (241)
                      .++|...++||.|+||.||++.+  ++..+|+|.+.... ......+.+|+.++..++||||+++++++..++..+++||
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (333)
T ss_pred             hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence            36788899999999999999999  78889999887542 2234668999999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCC-CeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPR-PIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~-~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      |+++++|.+++...     ..+++..+..++.|++.||.|||   +. +++|+||||+|||++.++.+||+|||++..+.
T Consensus        84 ~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~l~~~l~~lH---~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~  155 (333)
T cd06650          84 HMDGGSLDQVLKKA-----GRIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI  155 (333)
T ss_pred             cCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhh
Confidence            99999999999654     34888999999999999999999   64 79999999999999999999999999998664


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .....     ...++..|++||
T Consensus       156 ~~~~~-----~~~~~~~y~aPE  172 (333)
T cd06650         156 DSMAN-----SFVGTRSYMSPE  172 (333)
T ss_pred             hhccc-----cCCCCccccCHH
Confidence            32211     112445677787

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.96  E-value=2.6e-28  Score=207.07  Aligned_cols=160  Identities=20%  Similarity=0.205  Sum_probs=133.5

Q ss_pred             CeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhc-CCCceeeEeeEEecCCcceEEEeeCCC
Q 026214           68 NVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQM-SHDHILKLIGCCLETPIPILAFESVEY  141 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~  141 (241)
                      +.||+|+||.||+|.+  ++..||+|.+....   ......+..|..++..+ +||||+++++++...+..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~   80 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG   80 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence            4689999999999998  78899999987532   23345678888888877 799999999999999999999999999


Q ss_pred             CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCcc
Q 026214          142 GNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTS  221 (241)
Q Consensus       142 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~  221 (241)
                      |+|.+++...     ..+++..+..++.|++.||.|||   +.+++||||||+|||++.++.++|+|||++.........
T Consensus        81 g~L~~~i~~~-----~~l~~~~~~~~~~ql~~~L~~lH---~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~  152 (320)
T cd05590          81 GDLMFHIQKS-----RRFDEARARFYAAEITSALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKT  152 (320)
T ss_pred             chHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCc
Confidence            9999988554     35889999999999999999999   999999999999999999999999999999865332221


Q ss_pred             ccceeecCCceeeeecC
Q 026214          222 GAKCLKSERTEICCVRE  238 (241)
Q Consensus       222 ~~~~~~~~~~~~~~~~e  238 (241)
                      .   ....++..|+|||
T Consensus       153 ~---~~~~gt~~y~aPE  166 (320)
T cd05590         153 T---STFCGTPDYIAPE  166 (320)
T ss_pred             c---cccccCccccCHH
Confidence            1   1123455678887

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.96  E-value=4.3e-28  Score=205.20  Aligned_cols=168  Identities=19%  Similarity=0.331  Sum_probs=137.5

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCe----EEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QER----LISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPIL  134 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  134 (241)
                      ..|...+.||+|+||.||+|.+  ++.    .||+|.+.... ....+.+.+|+.+++.++||||+++++++... ..++
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~   85 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   85 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence            4588889999999999999987  333    48999987543 23356788999999999999999999999765 5778


Q ss_pred             EEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCcee
Q 026214          135 AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSIS  214 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~  214 (241)
                      ++||+++|+|.+++...    ...+++..++.++.|++.||.|||   +.+++||||||+|||++.++.+||+|||+++.
T Consensus        86 v~e~~~~g~l~~~l~~~----~~~~~~~~~~~~~~qi~~~L~~LH---~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~  158 (316)
T cd05108          86 ITQLMPFGCLLDYVREH----KDNIGSQYLLNWCVQIAKGMNYLE---ERRLVHRDLAARNVLVKTPQHVKITDFGLAKL  158 (316)
T ss_pred             eeecCCCCCHHHHHHhc----cccCCHHHHHHHHHHHHHHHHHHH---hcCeeccccchhheEecCCCcEEEcccccccc
Confidence            99999999999999765    345888999999999999999999   99999999999999999999999999999998


Q ss_pred             cCCCCccccceeecCCceeeeecC
Q 026214          215 IPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +..+..... ......+..|++||
T Consensus       159 ~~~~~~~~~-~~~~~~~~~y~apE  181 (316)
T cd05108         159 LGADEKEYH-AEGGKVPIKWMALE  181 (316)
T ss_pred             ccCCCccee-ccCCccceeecChH
Confidence            765433221 11222344577777

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.96  E-value=3.8e-28  Score=211.90  Aligned_cols=179  Identities=15%  Similarity=0.214  Sum_probs=142.8

Q ss_pred             HHHHHhcCCCcCCeeecccceEEEEEEE--C-----CeEEEEEEeeccCC-cchhhHHHHHHHHHhcC-CCceeeEeeEE
Q 026214           56 ELKLATNNYDQKNVITEDWGCILYKGFW--Q-----ERLISVMRFRESNR-DGHGSCINNIVYAAQMS-HDHILKLIGCC  126 (241)
Q Consensus        56 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~--~-----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~  126 (241)
                      .+....+.|...++||+|+||.||+|.+  .     ...||+|++..... ...+.+.+|+.++..+. ||||+++++++
T Consensus        31 ~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~  110 (400)
T cd05105          31 RWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGAC  110 (400)
T ss_pred             ceeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEE
Confidence            3445567888899999999999999986  1     24699999975432 23457899999999996 99999999999


Q ss_pred             ecCCcceEEEeeCCCCCHHHHHhhcCCC----------------------------------------------------
Q 026214          127 LETPIPILAFESVEYGNLRDRILSASQP----------------------------------------------------  154 (241)
Q Consensus       127 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~----------------------------------------------------  154 (241)
                      ...+..++||||+++|+|.+++......                                                    
T Consensus       111 ~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (400)
T cd05105         111 TKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVP  190 (400)
T ss_pred             ccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccch
Confidence            9999999999999999999998653110                                                    


Q ss_pred             ---------------------------------------CCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCC
Q 026214          155 ---------------------------------------QTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH  195 (241)
Q Consensus       155 ---------------------------------------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~N  195 (241)
                                                             ....+++..+..++.|++.||.|||   ..+++|+||||+|
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dikp~N  267 (400)
T cd05105         191 MLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLA---SKNCVHRDLAARN  267 (400)
T ss_pred             hhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChHh
Confidence                                                   0124778888999999999999999   9999999999999


Q ss_pred             eeEcCCCcEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          196 ILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       196 ill~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ||++.++.+||+|||+++.+..+..... ......+..|++||
T Consensus       268 ill~~~~~~kL~DfGla~~~~~~~~~~~-~~~~~~~~~y~aPE  309 (400)
T cd05105         268 VLLAQGKIVKICDFGLARDIMHDSNYVS-KGSTFLPVKWMAPE  309 (400)
T ss_pred             EEEeCCCEEEEEeCCcceeccccccccc-cCCcCCCcceEChh
Confidence            9999999999999999987754432211 11122344678888

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.96  E-value=4.3e-28  Score=205.92  Aligned_cols=165  Identities=18%  Similarity=0.189  Sum_probs=136.4

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhc-CCCceeeEeeEEecCCcceEEE
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQM-SHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      +|...+.||+|+||.||+|.+  ++..||+|.+....   ......+..|..++..+ +|++|+++.+++...+..++||
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM   80 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence            467788999999999999998  67899999987642   12234567788888777 6899999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||+++|+|.+.+...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++...
T Consensus        81 E~~~~g~L~~~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~  152 (323)
T cd05616          81 EYVNGGDLMYQIQQV-----GRFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENM  152 (323)
T ss_pred             cCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCEEecCCCHHHeEECCCCcEEEccCCCceecC
Confidence            999999999998554     34889999999999999999999   9999999999999999999999999999998654


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .+....   ....++..|+|||
T Consensus       153 ~~~~~~---~~~~gt~~y~aPE  171 (323)
T cd05616         153 WDGVTT---KTFCGTPDYIAPE  171 (323)
T ss_pred             CCCCcc---ccCCCChhhcCHH
Confidence            332221   1123445678887

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.96  E-value=6.1e-28  Score=199.28  Aligned_cols=171  Identities=18%  Similarity=0.191  Sum_probs=141.4

Q ss_pred             cCCCcCCeeecccceEEEEEEE--C---CeEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--Q---ERLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA  135 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  135 (241)
                      .+|...+.||+|+||.||+|.+  +   ...+|+|.+.... ......+.+|+.++..++||||+++++++..++..+++
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   83 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV   83 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence            4577889999999999999987  2   2368999886532 22346789999999999999999999999999999999


Q ss_pred             EeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceec
Q 026214          136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI  215 (241)
Q Consensus       136 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~  215 (241)
                      |||+++++|.+++...    ...+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.++++|||++..+
T Consensus        84 ~e~~~~~~L~~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~  156 (267)
T cd05066          84 TEYMENGSLDAFLRKH----DGQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILVNSNLVCKVSDFGLSRVL  156 (267)
T ss_pred             EEcCCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCEeehhhchhcEEECCCCeEEeCCCCccccc
Confidence            9999999999999664    345899999999999999999999   999999999999999999999999999999987


Q ss_pred             CCCCccccceeecCCceeeeecCC
Q 026214          216 PEGGTSGAKCLKSERTEICCVREN  239 (241)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~e~  239 (241)
                      ............+..+..|.+||-
T Consensus       157 ~~~~~~~~~~~~~~~~~~y~~pe~  180 (267)
T cd05066         157 EDDPEAAYTTRGGKIPIRWTAPEA  180 (267)
T ss_pred             ccccceeeecCCCccceeecCHhH
Confidence            654433222223333446778873

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.96  E-value=2e-28  Score=210.43  Aligned_cols=160  Identities=21%  Similarity=0.206  Sum_probs=133.1

Q ss_pred             CCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC-cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCC
Q 026214           64 YDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR-DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVE  140 (241)
Q Consensus        64 ~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~  140 (241)
                      |...+.||+|+||.||+|.+  ++..||+|.+..... .....+.+|+.+++.++|+||+++++++...+..+++|||+.
T Consensus        76 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~  155 (353)
T PLN00034         76 LERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMD  155 (353)
T ss_pred             HhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCC
Confidence            45567899999999999998  789999999865432 234668899999999999999999999999999999999999


Q ss_pred             CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCc
Q 026214          141 YGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGT  220 (241)
Q Consensus       141 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~  220 (241)
                      +++|.+..         ..++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++.+.....
T Consensus       156 ~~~L~~~~---------~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~  223 (353)
T PLN00034        156 GGSLEGTH---------IADEQFLADVARQILSGIAYLH---RRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMD  223 (353)
T ss_pred             CCcccccc---------cCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEcccccceecccccc
Confidence            99886432         2566778899999999999999   99999999999999999999999999999987754322


Q ss_pred             cccceeecCCceeeeecC
Q 026214          221 SGAKCLKSERTEICCVRE  238 (241)
Q Consensus       221 ~~~~~~~~~~~~~~~~~e  238 (241)
                      ..   ....++..|++||
T Consensus       224 ~~---~~~~gt~~y~aPE  238 (353)
T PLN00034        224 PC---NSSVGTIAYMSPE  238 (353)
T ss_pred             cc---cccccCccccCcc
Confidence            11   1123455678888

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.96  E-value=3e-28  Score=207.00  Aligned_cols=165  Identities=18%  Similarity=0.186  Sum_probs=136.2

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhcC-CCceeeEeeEEecCCcceEEE
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQMS-HDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~  136 (241)
                      +|...+.||+|+||.||+|.+  ++..||+|.+....   ......+..|..++..+. |++|+++.+++...+..++||
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM   80 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence            366778999999999999998  78899999987542   223456788899988885 577888999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||+++|+|.+++...     ..+++..+..++.|++.||.|||   +.+++||||||+|||++.++.++|+|||+++...
T Consensus        81 Ey~~~g~L~~~i~~~-----~~l~~~~~~~i~~qi~~al~~lH---~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~  152 (323)
T cd05615          81 EYVNGGDLMYHIQQV-----GKFKEPQAVFYAAEISVGLFFLH---RRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHM  152 (323)
T ss_pred             cCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeccccccccC
Confidence            999999999998553     45899999999999999999999   9999999999999999999999999999998654


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .+....   ....++..|+|||
T Consensus       153 ~~~~~~---~~~~gt~~y~aPE  171 (323)
T cd05615         153 VDGVTT---RTFCGTPDYIAPE  171 (323)
T ss_pred             CCCccc---cCccCCccccCHH
Confidence            332211   1122445677887

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.96  E-value=6.1e-28  Score=203.59  Aligned_cols=166  Identities=20%  Similarity=0.259  Sum_probs=138.4

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC-cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR-DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      ..|...+.||+|+||.||+|.+  ++..||+|.+..... .....+.+|+.+++.++||||+++++++..++..+++|||
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   85 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY   85 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence            4578889999999999999998  788899999875432 2334678999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      ++ ++|.+.+...    ...+++..+..++.|++.||.|||   +.+|+||||||+||+++.++.+||+|||++.....+
T Consensus        86 ~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~  157 (309)
T cd07872          86 LD-KDLKQYMDDC----GNIMSMHNVKIFLYQILRGLAYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSVP  157 (309)
T ss_pred             CC-CCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECccccceecCCC
Confidence            98 5898888654    345788999999999999999999   999999999999999999999999999999875443


Q ss_pred             CccccceeecCCceeeeecC
Q 026214          219 GTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .....   ....+..|++||
T Consensus       158 ~~~~~---~~~~~~~y~aPE  174 (309)
T cd07872         158 TKTYS---NEVVTLWYRPPD  174 (309)
T ss_pred             ccccc---cccccccccCCH
Confidence            22211   122345678887

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.96  E-value=4.4e-28  Score=205.85  Aligned_cols=160  Identities=18%  Similarity=0.168  Sum_probs=130.4

Q ss_pred             CeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHH-HHHhcCCCceeeEeeEEecCCcceEEEeeCCC
Q 026214           68 NVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIV-YAAQMSHDHILKLIGCCLETPIPILAFESVEY  141 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~  141 (241)
                      +.||+|+||.||+|.+  ++..||+|.+....   ......+..|.. +++.++||||+++++++...+..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence            4689999999999999  78999999987542   122344555655 45778999999999999999999999999999


Q ss_pred             CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCcc
Q 026214          142 GNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTS  221 (241)
Q Consensus       142 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~  221 (241)
                      ++|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++.........
T Consensus        81 g~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~  152 (323)
T cd05575          81 GELFFHLQRE-----RSFPEPRARFYAAEIASALGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKT  152 (323)
T ss_pred             CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCc
Confidence            9999988553     45889999999999999999999   999999999999999999999999999999754322211


Q ss_pred             ccceeecCCceeeeecC
Q 026214          222 GAKCLKSERTEICCVRE  238 (241)
Q Consensus       222 ~~~~~~~~~~~~~~~~e  238 (241)
                      .   ....++..|++||
T Consensus       153 ~---~~~~gt~~y~aPE  166 (323)
T cd05575         153 T---STFCGTPEYLAPE  166 (323)
T ss_pred             c---ccccCChhhcChh
Confidence            1   1223455678887

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.96  E-value=3.5e-28  Score=206.01  Aligned_cols=160  Identities=20%  Similarity=0.152  Sum_probs=133.8

Q ss_pred             CeeecccceEEEEEEE-----CCeEEEEEEeeccCC--cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCC
Q 026214           68 NVITEDWGCILYKGFW-----QERLISVMRFRESNR--DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVE  140 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~  140 (241)
                      +.||+|+||.||++..     ++..||+|.+.....  .....+.+|+.++.+++||||+++++++...+..++||||++
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   81 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR   81 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence            5799999999999875     578999999876431  233457789999999999999999999999999999999999


Q ss_pred             CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCc
Q 026214          141 YGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGT  220 (241)
Q Consensus       141 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~  220 (241)
                      +++|.+++...     ..+++..+..++.|++.||.|||   +.+++||||||+||+++.++.++|+|||++........
T Consensus        82 ~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~  153 (318)
T cd05582          82 GGDLFTRLSKE-----VMFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK  153 (318)
T ss_pred             CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCC
Confidence            99999999553     45899999999999999999999   99999999999999999999999999999987644322


Q ss_pred             cccceeecCCceeeeecC
Q 026214          221 SGAKCLKSERTEICCVRE  238 (241)
Q Consensus       221 ~~~~~~~~~~~~~~~~~e  238 (241)
                      ..   ....++..|++||
T Consensus       154 ~~---~~~~g~~~y~aPE  168 (318)
T cd05582         154 KA---YSFCGTVEYMAPE  168 (318)
T ss_pred             ce---ecccCChhhcCHH
Confidence            11   1122344577777

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.96  E-value=4.3e-28  Score=206.07  Aligned_cols=160  Identities=19%  Similarity=0.156  Sum_probs=130.4

Q ss_pred             CeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHH-HHHhcCCCceeeEeeEEecCCcceEEEeeCCC
Q 026214           68 NVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIV-YAAQMSHDHILKLIGCCLETPIPILAFESVEY  141 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~  141 (241)
                      +.||+|+||.||+|.+  ++..||+|.+....   ......+..|.. +++.++||||+++++++...+..+++|||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG   80 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence            4689999999999998  78999999987542   122344556655 46778999999999999999999999999999


Q ss_pred             CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCcc
Q 026214          142 GNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTS  221 (241)
Q Consensus       142 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~  221 (241)
                      ++|...+...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++........
T Consensus        81 ~~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~lH---~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~  152 (325)
T cd05604          81 GELFFHLQRE-----RSFPEPRARFYAAEIASALGYLH---SINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDT  152 (325)
T ss_pred             CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCC
Confidence            9999888543     45899999999999999999999   999999999999999999999999999999754322211


Q ss_pred             ccceeecCCceeeeecC
Q 026214          222 GAKCLKSERTEICCVRE  238 (241)
Q Consensus       222 ~~~~~~~~~~~~~~~~e  238 (241)
                      .   ....++..|++||
T Consensus       153 ~---~~~~gt~~y~aPE  166 (325)
T cd05604         153 T---TTFCGTPEYLAPE  166 (325)
T ss_pred             c---ccccCChhhCCHH
Confidence            1   1222455678887

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.96  E-value=4.8e-28  Score=205.37  Aligned_cols=160  Identities=18%  Similarity=0.168  Sum_probs=130.0

Q ss_pred             CeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHH-HHHhcCCCceeeEeeEEecCCcceEEEeeCCC
Q 026214           68 NVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIV-YAAQMSHDHILKLIGCCLETPIPILAFESVEY  141 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~  141 (241)
                      +.||+|+||.||+|.+  ++..||+|.+....   ......+..|.. +++.++||||+++++++...+..++||||+++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG   80 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            4699999999999998  78899999987532   122344555654 57888999999999999999999999999999


Q ss_pred             CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCcc
Q 026214          142 GNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTS  221 (241)
Q Consensus       142 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~  221 (241)
                      ++|...+...     ..+++..+..++.|++.||.|||   +.+|+||||||+||+++.++.+||+|||+++........
T Consensus        81 ~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~  152 (321)
T cd05603          81 GELFFHLQRE-----RCFLEPRARFYAAEVASAIGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEET  152 (321)
T ss_pred             CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCc
Confidence            9999888543     45788889999999999999999   999999999999999999999999999998754322211


Q ss_pred             ccceeecCCceeeeecC
Q 026214          222 GAKCLKSERTEICCVRE  238 (241)
Q Consensus       222 ~~~~~~~~~~~~~~~~e  238 (241)
                      .   ....++..|++||
T Consensus       153 ~---~~~~gt~~y~aPE  166 (321)
T cd05603         153 T---STFCGTPEYLAPE  166 (321)
T ss_pred             c---ccccCCcccCCHH
Confidence            1   1123455688887

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.96  E-value=7.9e-28  Score=197.73  Aligned_cols=169  Identities=15%  Similarity=0.246  Sum_probs=141.8

Q ss_pred             cCCCcCCeeecccceEEEEEEE-CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCC
Q 026214           62 NNYDQKNVITEDWGCILYKGFW-QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVE  140 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~  140 (241)
                      ++|...++||+|++|.||+|.+ ++..||+|.+.... ...+.+.+|+.+++.++||||+++++++...+..++++||++
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   84 (261)
T cd05072           6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMA   84 (261)
T ss_pred             HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCC
Confidence            4577889999999999999998 67789999876543 245678999999999999999999999999999999999999


Q ss_pred             CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCc
Q 026214          141 YGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGT  220 (241)
Q Consensus       141 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~  220 (241)
                      +++|.+++...   ....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++........
T Consensus        85 ~~~L~~~l~~~---~~~~~~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~  158 (261)
T cd05072          85 KGSLLDFLKSD---EGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY  158 (261)
T ss_pred             CCcHHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEecCCCcEEECCCccceecCCCce
Confidence            99999999764   2345888899999999999999999   99999999999999999999999999999988754332


Q ss_pred             cccceeecCCceeeeecCC
Q 026214          221 SGAKCLKSERTEICCVREN  239 (241)
Q Consensus       221 ~~~~~~~~~~~~~~~~~e~  239 (241)
                      ...  .....+..|++||-
T Consensus       159 ~~~--~~~~~~~~y~aPE~  175 (261)
T cd05072         159 TAR--EGAKFPIKWTAPEA  175 (261)
T ss_pred             ecc--CCCccceecCCHHH
Confidence            211  11223345778873

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.96  E-value=1.2e-28  Score=215.99  Aligned_cols=156  Identities=18%  Similarity=0.235  Sum_probs=140.8

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      +-|..++-||.|+.|.|..|++  +|+.+|||++.+..   ........+|+.+|+.+.|||+++++++|.....+|||.
T Consensus        12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl   91 (786)
T KOG0588|consen   12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL   91 (786)
T ss_pred             cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence            4467889999999999999999  99999999998752   234566899999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||+++|.|.+++...     +++++.+..+++.||+.|+.|||   ..+|+||||||+|+|||..+++||+|||+|..-.
T Consensus        92 Eyv~gGELFdylv~k-----G~l~e~eaa~ff~QIi~gv~yCH---~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~  163 (786)
T KOG0588|consen   92 EYVPGGELFDYLVRK-----GPLPEREAAHFFRQILDGVSYCH---AFNICHRDLKPENLLLDVKNNIKIADFGMASLEV  163 (786)
T ss_pred             EecCCchhHHHHHhh-----CCCCCHHHHHHHHHHHHHHHHHh---hhcceeccCCchhhhhhcccCEeeeccceeeccc
Confidence            999999999999664     67999999999999999999999   9999999999999999999999999999999877


Q ss_pred             CCCccccce
Q 026214          217 EGGTSGAKC  225 (241)
Q Consensus       217 ~~~~~~~~~  225 (241)
                      ++.-..+.|
T Consensus       164 ~gklLeTSC  172 (786)
T KOG0588|consen  164 PGKLLETSC  172 (786)
T ss_pred             CCccccccC
Confidence            776555555

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.96  E-value=1e-27  Score=197.67  Aligned_cols=170  Identities=18%  Similarity=0.197  Sum_probs=141.3

Q ss_pred             cCCCcCCeeecccceEEEEEEE--C---CeEEEEEEeeccCC-cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--Q---ERLISVMRFRESNR-DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA  135 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~---~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  135 (241)
                      ++|...+.||+|+||.||+|.+  .   ...||+|.+..... .....+.+|+.++..++||||+++++++...+..+++
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv   83 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII   83 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence            5688899999999999999988  2   35799998875432 2345688999999999999999999999999999999


Q ss_pred             EeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceec
Q 026214          136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI  215 (241)
Q Consensus       136 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~  215 (241)
                      |||+++++|.+++...    ...+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++..+
T Consensus        84 ~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~  156 (266)
T cd05033          84 TEYMENGSLDKFLREN----DGKFTVGQLVGMLRGIASGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRRL  156 (266)
T ss_pred             EEcCCCCCHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCCEEECccchhhcc
Confidence            9999999999999664    346899999999999999999999   999999999999999999999999999999988


Q ss_pred             CCCCccccceeecCCceeeeecCC
Q 026214          216 PEGGTSGAKCLKSERTEICCVREN  239 (241)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~e~  239 (241)
                      ........ ...+..+..|.+||-
T Consensus       157 ~~~~~~~~-~~~~~~~~~y~~Pe~  179 (266)
T cd05033         157 EDSEATYT-TKGGKIPIRWTAPEA  179 (266)
T ss_pred             ccccccee-ccCCCCCccccChhh
Confidence            63222111 112334456778873

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=1.6e-27  Score=195.93  Aligned_cols=169  Identities=20%  Similarity=0.229  Sum_probs=141.3

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC-----cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR-----DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPIL  134 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  134 (241)
                      ++|...+.||+|++|.||.+.+  ++..+++|.+.....     .....+.+|+.++.+++||||+++++++...+..++
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~   81 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI   81 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence            5688899999999999999998  789999998875321     123568889999999999999999999999999999


Q ss_pred             EEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCcee
Q 026214          135 AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSIS  214 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~  214 (241)
                      ++||+++++|.+++...     ..+++..+..++.|++.||.|||   ..+++|+||+|+||+++.++.++|+|||++..
T Consensus        82 v~e~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~  153 (263)
T cd06625          82 FMEYMPGGSVKDQLKAY-----GALTETVTRKYTRQILEGVEYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKR  153 (263)
T ss_pred             EEEECCCCcHHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeeccccee
Confidence            99999999999999654     34888999999999999999999   99999999999999999999999999999987


Q ss_pred             cCCCCccccceeecCCceeeeecC
Q 026214          215 IPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +..................|.+||
T Consensus       154 ~~~~~~~~~~~~~~~~~~~y~aPE  177 (263)
T cd06625         154 LQTICSSGTGMKSVTGTPYWMSPE  177 (263)
T ss_pred             ccccccccccccCCCcCccccCcc
Confidence            654322221112223445677887

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.96  E-value=7.8e-28  Score=206.99  Aligned_cols=166  Identities=20%  Similarity=0.233  Sum_probs=143.9

Q ss_pred             HhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCc---chhhHHHHHHHHHhcC-CCceeeEeeEEecCCcce
Q 026214           60 ATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRD---GHGSCINNIVYAAQMS-HDHILKLIGCCLETPIPI  133 (241)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~  133 (241)
                      ....|...+.||.|.||.||++..  ++..+|+|.+.+....   ....+.+|+.+|+.+. ||||+.+.+++.+....+
T Consensus        33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~  112 (382)
T KOG0032|consen   33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY  112 (382)
T ss_pred             ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence            345688889999999999999999  7999999999876543   3357899999999998 999999999999999999


Q ss_pred             EEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcC----CCcEEEccc
Q 026214          134 LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNE----ENVAKMFDF  209 (241)
Q Consensus       134 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~----~~~~ki~Df  209 (241)
                      +|||++.||.|.+.+...      .+++..+..++.|++.++.|||   +.+++||||||+|+|+..    ++.+|++||
T Consensus       113 lvmEL~~GGeLfd~i~~~------~~sE~da~~~~~~il~av~~lH---~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DF  183 (382)
T KOG0032|consen  113 LVMELCEGGELFDRIVKK------HYSERDAAGIIRQILEAVKYLH---SLGVVHRDLKPENLLLASKDEGSGRIKLIDF  183 (382)
T ss_pred             EEEEecCCchHHHHHHHc------cCCHHHHHHHHHHHHHHHHHHH---hCCceeccCCHHHeeeccccCCCCcEEEeeC
Confidence            999999999999999665      2999999999999999999999   999999999999999954    357999999


Q ss_pred             cCceecCCCCccccceeecCCceeeeecC
Q 026214          210 SLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       210 G~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |+|..+..+..    ...-.++..|+|||
T Consensus       184 Gla~~~~~~~~----~~~~~Gtp~y~APE  208 (382)
T KOG0032|consen  184 GLAKFIKPGER----LHTIVGTPEYVAPE  208 (382)
T ss_pred             CCceEccCCce----EeeecCCccccCch
Confidence            99999887322    22344556788887

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.95  E-value=1.3e-27  Score=197.14  Aligned_cols=148  Identities=22%  Similarity=0.269  Sum_probs=133.7

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeC
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESV  139 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  139 (241)
                      .+|...+.||+|+||.||+|.+  ++..||+|.+..........+.+|+.++..++||||+++++++...+..+++|||+
T Consensus         9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~   88 (267)
T cd06646           9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYC   88 (267)
T ss_pred             hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCC
Confidence            4688889999999999999998  78899999987654445566889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCC
Q 026214          140 EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE  217 (241)
Q Consensus       140 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~  217 (241)
                      ++++|.+++...     ..+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++..+..
T Consensus        89 ~~~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~  158 (267)
T cd06646          89 GGGSLQDIYHVT-----GPLSELQIAYVCRETLQGLAYLH---SKGKMHRDIKGANILLTDNGDVKLADFGVAAKITA  158 (267)
T ss_pred             CCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEECcCccceeecc
Confidence            999999998543     45889999999999999999999   99999999999999999999999999999987754

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.95  E-value=2.9e-28  Score=200.25  Aligned_cols=169  Identities=18%  Similarity=0.285  Sum_probs=144.1

Q ss_pred             hcCCCcCCeeecccceEEEEEEE-CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeC
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW-QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESV  139 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  139 (241)
                      ..+|...++||.|++|.||+|.+ .+..+++|.+..........+..|+.+++.++||||+++++++...+..+++|||+
T Consensus         5 ~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~   84 (261)
T cd05148           5 REEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELM   84 (261)
T ss_pred             HHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeec
Confidence            34577788999999999999999 77889999988766545677899999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCC
Q 026214          140 EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGG  219 (241)
Q Consensus       140 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~  219 (241)
                      ++++|.+++...   ....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++..+..+.
T Consensus        85 ~~~~L~~~~~~~---~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~  158 (261)
T cd05148          85 EKGSLLAFLRSP---EGQVLPVASLIDMACQVAEGMAYLE---EQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDV  158 (261)
T ss_pred             ccCCHHHHHhcC---CCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccCcceEEEcCCceEEEccccchhhcCCcc
Confidence            999999999764   2345899999999999999999999   9999999999999999999999999999998775432


Q ss_pred             ccccceeecCCceeeeecC
Q 026214          220 TSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~e  238 (241)
                      ....   ....+..|.+||
T Consensus       159 ~~~~---~~~~~~~~~~PE  174 (261)
T cd05148         159 YLSS---DKKIPYKWTAPE  174 (261)
T ss_pred             cccc---CCCCceEecCHH
Confidence            2211   233344577776

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.95  E-value=1.4e-27  Score=199.32  Aligned_cols=165  Identities=19%  Similarity=0.227  Sum_probs=132.5

Q ss_pred             CCCcCCeeecccceEEEEEEE---CCeEEEEEEeeccCC--cchhhHHHHHHHHHhc---CCCceeeEeeEEec-----C
Q 026214           63 NYDQKNVITEDWGCILYKGFW---QERLISVMRFRESNR--DGHGSCINNIVYAAQM---SHDHILKLIGCCLE-----T  129 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~---~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~-----~  129 (241)
                      +|...+.||+|+||.||+|.+   ++..||+|.+.....  .....+.+|+.++..+   +||||+++++++..     .
T Consensus         2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~   81 (290)
T cd07862           2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE   81 (290)
T ss_pred             CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence            578889999999999999987   467899998875432  2234567788777766   69999999998853     3


Q ss_pred             CcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccc
Q 026214          130 PIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDF  209 (241)
Q Consensus       130 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~Df  209 (241)
                      ...+++|||++ ++|.+++...   ....+++..+..++.|++.||.|||   +.+++||||||+|||++.++.+||+||
T Consensus        82 ~~~~lv~e~~~-~~l~~~~~~~---~~~~~~~~~~~~i~~qi~~aL~~lH---~~~iiH~dlkp~Nil~~~~~~~kl~Df  154 (290)
T cd07862          82 TKLTLVFEHVD-QDLTTYLDKV---PEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADF  154 (290)
T ss_pred             CcEEEEEccCC-CCHHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEcCCCCEEEccc
Confidence            46899999997 6999999664   2345899999999999999999999   999999999999999999999999999


Q ss_pred             cCceecCCCCccccceeecCCceeeeecC
Q 026214          210 SLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       210 G~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |++..+......    ....++..|+|||
T Consensus       155 g~~~~~~~~~~~----~~~~~~~~y~aPE  179 (290)
T cd07862         155 GLARIYSFQMAL----TSVVVTLWYRAPE  179 (290)
T ss_pred             cceEeccCCccc----ccccccccccChH
Confidence            999876544211    1222445677887

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.95  E-value=8.4e-28  Score=203.67  Aligned_cols=160  Identities=17%  Similarity=0.184  Sum_probs=132.1

Q ss_pred             CeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhc-CCCceeeEeeEEecCCcceEEEeeCCC
Q 026214           68 NVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQM-SHDHILKLIGCCLETPIPILAFESVEY  141 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~  141 (241)
                      +.||+|+||.||+|.+  ++..||+|.+....   ......+..|..++..+ +||||+++++++.+.+..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~   80 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence            4689999999999998  67899999987642   22345567788888765 999999999999999999999999999


Q ss_pred             CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCcc
Q 026214          142 GNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTS  221 (241)
Q Consensus       142 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~  221 (241)
                      |+|.+++...     ..+++..+..++.|++.||.|||   +.+++||||||+|||++.++.+||+|||++.........
T Consensus        81 g~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  152 (316)
T cd05619          81 GDLMFHIQSC-----HKFDLPRATFYAAEIICGLQFLH---SKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAK  152 (316)
T ss_pred             CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCc
Confidence            9999999543     35888999999999999999999   999999999999999999999999999999864332211


Q ss_pred             ccceeecCCceeeeecC
Q 026214          222 GAKCLKSERTEICCVRE  238 (241)
Q Consensus       222 ~~~~~~~~~~~~~~~~e  238 (241)
                      .   ....++..|+|||
T Consensus       153 ~---~~~~gt~~y~aPE  166 (316)
T cd05619         153 T---CTFCGTPDYIAPE  166 (316)
T ss_pred             e---eeecCCccccCHH
Confidence            1   1123455678887

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.95  E-value=6.1e-28  Score=204.46  Aligned_cols=160  Identities=16%  Similarity=0.150  Sum_probs=132.2

Q ss_pred             CeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhc-CCCceeeEeeEEecCCcceEEEeeCCC
Q 026214           68 NVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQM-SHDHILKLIGCCLETPIPILAFESVEY  141 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~  141 (241)
                      +.||+|+||.||+|.+  ++..||+|.+....   ......+..|..++..+ +||||+++++++...+..++||||+.+
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   80 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence            4699999999999998  78899999987642   22345567788888765 899999999999999999999999999


Q ss_pred             CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCcc
Q 026214          142 GNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTS  221 (241)
Q Consensus       142 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~  221 (241)
                      ++|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.++|+|||+++........
T Consensus        81 g~L~~~i~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  152 (316)
T cd05620          81 GDLMFHIQDK-----GRFDLYRATFYAAEIVCGLQFLH---SKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNR  152 (316)
T ss_pred             CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCc
Confidence            9999998553     35888999999999999999999   999999999999999999999999999998754322211


Q ss_pred             ccceeecCCceeeeecC
Q 026214          222 GAKCLKSERTEICCVRE  238 (241)
Q Consensus       222 ~~~~~~~~~~~~~~~~e  238 (241)
                      .   ....++..|+|||
T Consensus       153 ~---~~~~gt~~y~aPE  166 (316)
T cd05620         153 A---STFCGTPDYIAPE  166 (316)
T ss_pred             e---eccCCCcCccCHH
Confidence            1   1223455778887

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.95  E-value=1.5e-27  Score=196.20  Aligned_cols=162  Identities=15%  Similarity=0.243  Sum_probs=133.2

Q ss_pred             eeecccceEEEEEEE----CCeEEEEEEeeccCCc-chhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCCCCC
Q 026214           69 VITEDWGCILYKGFW----QERLISVMRFRESNRD-GHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGN  143 (241)
Q Consensus        69 ~lg~G~~g~Vy~~~~----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs  143 (241)
                      .||+|+||.||+|.+    .+..||+|.+...... ..+.+.+|+.++++++||||+++++++. ....++||||+++++
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~   80 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP   80 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence            489999999999976    3456999988765322 2456889999999999999999999885 457899999999999


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCcccc
Q 026214          144 LRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGA  223 (241)
Q Consensus       144 L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~~~  223 (241)
                      |.+++...    ...+++..++.++.|++.||.|||   ..+++|+||||+||+++.++.+||+|||++..+..+.....
T Consensus        81 L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~  153 (257)
T cd05115          81 LNKFLSGK----KDEITVSNVVELMHQVSMGMKYLE---GKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYK  153 (257)
T ss_pred             HHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHH---hcCeeecccchheEEEcCCCcEEeccCCccccccCCcccee
Confidence            99998654    346899999999999999999999   99999999999999999999999999999987765543332


Q ss_pred             ceeecCCceeeeecC
Q 026214          224 KCLKSERTEICCVRE  238 (241)
Q Consensus       224 ~~~~~~~~~~~~~~e  238 (241)
                      ....+..+..|++||
T Consensus       154 ~~~~~~~~~~y~aPE  168 (257)
T cd05115         154 ARSAGKWPLKWYAPE  168 (257)
T ss_pred             ccCCCCCCcccCCHH
Confidence            223333345677887

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.95  E-value=1e-27  Score=196.59  Aligned_cols=148  Identities=17%  Similarity=0.279  Sum_probs=131.2

Q ss_pred             CCCcCCeeecccceEEEEEEE-CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCCC
Q 026214           63 NYDQKNVITEDWGCILYKGFW-QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEY  141 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~  141 (241)
                      .|...+.||+|+||.||++.+ ++..+|+|.+.... .....+.+|+.++++++||||+++++++...+..+++|||+++
T Consensus         5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~   83 (256)
T cd05114           5 ELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMEN   83 (256)
T ss_pred             HcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCC
Confidence            466778999999999999998 66789999876543 3346789999999999999999999999999999999999999


Q ss_pred             CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          142 GNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       142 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      |+|.+++...    ...+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||+++.+...
T Consensus        84 ~~L~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~  153 (256)
T cd05114          84 GCLLNYLRQR----QGKLSKDMLLSMCQDVCEGMEYLE---RNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDD  153 (256)
T ss_pred             CcHHHHHHhC----ccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccCcceEEEcCCCeEEECCCCCccccCCC
Confidence            9999998654    235889999999999999999999   999999999999999999999999999999876443

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.95  E-value=7.6e-28  Score=215.28  Aligned_cols=179  Identities=15%  Similarity=0.121  Sum_probs=144.7

Q ss_pred             HHHHHHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEecCC
Q 026214           55 QELKLATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLETP  130 (241)
Q Consensus        55 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  130 (241)
                      .+.....++|...+.||+|+||.||+|.+  ++..||+|.+....  ......+.+|+.++..++|+|++++...+....
T Consensus        25 ~~~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~  104 (496)
T PTZ00283         25 ATAKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKD  104 (496)
T ss_pred             ccccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceeccc
Confidence            34455668999999999999999999998  88999999987543  223456888999999999999999987765432


Q ss_pred             --------cceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCC
Q 026214          131 --------IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEEN  202 (241)
Q Consensus       131 --------~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~  202 (241)
                              ..++||||+++|+|.+++..... ....+++..+..++.|++.||.|||   +.+|+||||||+|||++.++
T Consensus       105 ~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~-~~~~l~e~~~~~i~~qll~aL~~lH---~~~IiHrDLKP~NILl~~~~  180 (496)
T PTZ00283        105 PRNPENVLMIALVLDYANAGDLRQEIKSRAK-TNRTFREHEAGLLFIQVLLAVHHVH---SKHMIHRDIKSANILLCSNG  180 (496)
T ss_pred             ccCcccceEEEEEEeCCCCCcHHHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEeCCC
Confidence                    36799999999999999965422 2456899999999999999999999   99999999999999999999


Q ss_pred             cEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          203 VAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       203 ~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .+||+|||+++.+........ .....++..|++||
T Consensus       181 ~vkL~DFGls~~~~~~~~~~~-~~~~~Gt~~Y~aPE  215 (496)
T PTZ00283        181 LVKLGDFGFSKMYAATVSDDV-GRTFCGTPYYVAPE  215 (496)
T ss_pred             CEEEEecccCeeccccccccc-cccccCCcceeCHH
Confidence            999999999987754322111 11223556788998

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.95  E-value=1.5e-27  Score=195.07  Aligned_cols=164  Identities=21%  Similarity=0.260  Sum_probs=135.0

Q ss_pred             CeeecccceEEEEEEE--CCeEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCCCCCH
Q 026214           68 NVITEDWGCILYKGFW--QERLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNL  144 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL  144 (241)
                      +.||+|+||.||+|.+  ++..+|+|.+.... ......+.+|+.+++.++||||+++++++......++||||+++++|
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF   80 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence            4689999999999998  78999999876533 22346689999999999999999999999999999999999999999


Q ss_pred             HHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCccccc
Q 026214          145 RDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAK  224 (241)
Q Consensus       145 ~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~~~~  224 (241)
                      .+++...    ...+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++++|||++........ ...
T Consensus        81 ~~~~~~~----~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~-~~~  152 (252)
T cd05084          81 LTFLRTE----GPRLKVKELIQMVENAAAGMEYLE---SKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVY-AST  152 (252)
T ss_pred             HHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchheEEEcCCCcEEECccccCcccccccc-ccc
Confidence            9999653    345889999999999999999999   99999999999999999999999999999986543211 111


Q ss_pred             eeecCCceeeeecCC
Q 026214          225 CLKSERTEICCVREN  239 (241)
Q Consensus       225 ~~~~~~~~~~~~~e~  239 (241)
                      ......+..|++||-
T Consensus       153 ~~~~~~~~~y~aPE~  167 (252)
T cd05084         153 GGMKQIPVKWTAPEA  167 (252)
T ss_pred             CCCCCCceeecCchh
Confidence            111122345788873

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.95  E-value=5.7e-28  Score=210.35  Aligned_cols=160  Identities=15%  Similarity=0.146  Sum_probs=134.6

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeC
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESV  139 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  139 (241)
                      ..|...+.||+|+||.||+|.+  +++.||+|...      ...+.+|+.+++.++||||+++++++......++++|++
T Consensus        92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~  165 (391)
T PHA03212         92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRY  165 (391)
T ss_pred             CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecC
Confidence            5799999999999999999999  78999999643      234689999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCC
Q 026214          140 EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGG  219 (241)
Q Consensus       140 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~  219 (241)
                      . ++|.+++...     ..+++..++.++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+|.......
T Consensus       166 ~-~~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~ylH---~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~  236 (391)
T PHA03212        166 K-TDLYCYLAAK-----RNIAICDILAIERSVLRAIQYLH---ENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN  236 (391)
T ss_pred             C-CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHhEEEcCCCCEEEEeCCccccccccc
Confidence            6 6898888543     35889999999999999999999   9999999999999999999999999999997543322


Q ss_pred             ccccceeecCCceeeeecC
Q 026214          220 TSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~e  238 (241)
                      ...  .....++..|++||
T Consensus       237 ~~~--~~~~~gt~~y~aPE  253 (391)
T PHA03212        237 ANK--YYGWAGTIATNAPE  253 (391)
T ss_pred             ccc--cccccCccCCCChh
Confidence            111  11223456677887

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.95  E-value=8.7e-28  Score=204.44  Aligned_cols=160  Identities=20%  Similarity=0.202  Sum_probs=133.8

Q ss_pred             CeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhc-CCCceeeEeeEEecCCcceEEEeeCCC
Q 026214           68 NVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQM-SHDHILKLIGCCLETPIPILAFESVEY  141 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~  141 (241)
                      +.||+|+||.||+|.+  ++..||+|.+....   ......+.+|+.++.++ +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG   80 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence            4699999999999998  77899999998642   22345678899999888 699999999999999999999999999


Q ss_pred             CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCcc
Q 026214          142 GNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTS  221 (241)
Q Consensus       142 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~  221 (241)
                      ++|...+...     ..+++..+..++.|++.||.|||   +.+++||||||+|||++.++.+||+|||++.........
T Consensus        81 ~~L~~~~~~~-----~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~  152 (327)
T cd05617          81 GDLMFHMQRQ-----RKLPEEHARFYAAEICIALNFLH---ERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDT  152 (327)
T ss_pred             CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCc
Confidence            9999888543     35899999999999999999999   999999999999999999999999999999864322211


Q ss_pred             ccceeecCCceeeeecC
Q 026214          222 GAKCLKSERTEICCVRE  238 (241)
Q Consensus       222 ~~~~~~~~~~~~~~~~e  238 (241)
                      .   ....++..|+|||
T Consensus       153 ~---~~~~gt~~y~aPE  166 (327)
T cd05617         153 T---STFCGTPNYIAPE  166 (327)
T ss_pred             e---ecccCCcccCCHH
Confidence            1   1223455678887

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.95  E-value=6.6e-28  Score=198.60  Aligned_cols=165  Identities=28%  Similarity=0.407  Sum_probs=133.7

Q ss_pred             CCeeecccceEEEEEEEC------CeEEEEEEeeccCC-cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeC
Q 026214           67 KNVITEDWGCILYKGFWQ------ERLISVMRFRESNR-DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESV  139 (241)
Q Consensus        67 ~~~lg~G~~g~Vy~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  139 (241)
                      .+.||.|.||.||+|.+.      +..|+||.+..... ...+.+.+|+..+.+++||||++++|++...+..++|+||+
T Consensus         4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~   83 (259)
T PF07714_consen    4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYC   83 (259)
T ss_dssp             EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--
T ss_pred             eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccccc
Confidence            568999999999999985      68899999965432 23678999999999999999999999999888899999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCC
Q 026214          140 EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGG  219 (241)
Q Consensus       140 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~  219 (241)
                      ++|+|.+++...   ....+++..+..|+.|++.||.|||   +.+++|++|+|+||+++.++.+||+|||++.......
T Consensus        84 ~~g~L~~~L~~~---~~~~~~~~~~~~i~~~i~~~l~~Lh---~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~  157 (259)
T PF07714_consen   84 PGGSLDDYLKSK---NKEPLSEQQRLSIAIQIAEALSYLH---SNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKS  157 (259)
T ss_dssp             TTEBHHHHHHHT---CTTTSBHHHHHHHHHHHHHHHHHHH---HTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSS
T ss_pred             cccccccccccc---ccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccccc
Confidence            999999999876   3456899999999999999999999   8999999999999999999999999999999874332


Q ss_pred             ccccceeecCCceeeeecC
Q 026214          220 TSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~e  238 (241)
                      .. ...........|++||
T Consensus       158 ~~-~~~~~~~~~~~~~aPE  175 (259)
T PF07714_consen  158 KY-KNDSSQQLPLRYLAPE  175 (259)
T ss_dssp             SE-EESTTSESGGGGS-HH
T ss_pred             cc-cccccccccccccccc
Confidence            22 1111222334556776

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.95  E-value=1.2e-28  Score=217.38  Aligned_cols=165  Identities=22%  Similarity=0.262  Sum_probs=139.6

Q ss_pred             CcCCeeecccceEEEEEEE--CCeEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEecC------CcceEE
Q 026214           65 DQKNVITEDWGCILYKGFW--QERLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLET------PIPILA  135 (241)
Q Consensus        65 ~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~~~lv  135 (241)
                      ...+.||+|+||.||++.+  +|+.||||.+.... ....+...+|++++++++|||||+++++-.+.      ....++
T Consensus        16 ~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlv   95 (732)
T KOG4250|consen   16 EMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLV   95 (732)
T ss_pred             eehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEE
Confidence            4567899999999999997  99999999988743 23456789999999999999999999876543      357899


Q ss_pred             EeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcC--CC--cEEEccccC
Q 026214          136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNE--EN--VAKMFDFSL  211 (241)
Q Consensus       136 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~--~~--~~ki~DfG~  211 (241)
                      ||||.+|||...+....+  ...+++..++.++.+++.||.|||   +++|+||||||.||++..  +|  ..||+|||.
T Consensus        96 mEyC~gGsL~~~L~~PEN--~~GLpE~e~l~lL~d~~~al~~Lr---En~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~  170 (732)
T KOG4250|consen   96 MEYCSGGSLRKVLNSPEN--AYGLPESEFLDLLSDLVSALRHLR---ENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGA  170 (732)
T ss_pred             EeecCCCcHHHHhcCccc--ccCCCHHHHHHHHHHHHHHHHHHH---HcCceeccCCCCcEEEeecCCCceEEeeecccc
Confidence            999999999999987743  556999999999999999999999   999999999999999943  23  499999999


Q ss_pred             ceecCCCCccccceeecCCceeeeecC
Q 026214          212 SISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       212 a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |+.++.++    .+..-.+|+-|.+||
T Consensus       171 Arel~d~s----~~~S~vGT~~YLhPe  193 (732)
T KOG4250|consen  171 ARELDDNS----LFTSLVGTEEYLHPE  193 (732)
T ss_pred             cccCCCCC----eeeeecCchhhcChH
Confidence            99988776    333444666778876

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.95  E-value=1.3e-27  Score=197.26  Aligned_cols=172  Identities=21%  Similarity=0.207  Sum_probs=143.1

Q ss_pred             HHHHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceE
Q 026214           57 LKLATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPIL  134 (241)
Q Consensus        57 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  134 (241)
                      +..+++++.....||+|+||.||+|.+  ++..|++|.+........+.+.+|+.+++.++|+||+++++++..++..++
T Consensus         3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l   82 (268)
T cd06624           3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKI   82 (268)
T ss_pred             cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEE
Confidence            455677787788999999999999997  678899999877654556778999999999999999999999999999999


Q ss_pred             EEeeCCCCCHHHHHhhcCCCCCCCC--CHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcC-CCcEEEccccC
Q 026214          135 AFESVEYGNLRDRILSASQPQTEPL--LMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNE-ENVAKMFDFSL  211 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~~~~~~~~l--~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~-~~~~ki~DfG~  211 (241)
                      ++||+++++|.+++...    ..++  ++..+..++.|++.||.|||   +.+++|+||+|+||+++. ++.++|+|||+
T Consensus        83 v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~h~dl~p~nil~~~~~~~~~l~dfg~  155 (268)
T cd06624          83 FMEQVPGGSLSALLRSK----WGPLKDNEQTIIFYTKQILEGLKYLH---DNQIVHRDIKGDNVLVNTYSGVVKISDFGT  155 (268)
T ss_pred             EEecCCCCCHHHHHHHh----cccCCCcHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCeEEEecchh
Confidence            99999999999999754    2234  78888999999999999999   999999999999999976 67999999999


Q ss_pred             ceecCCCCccccceeecCCceeeeecC
Q 026214          212 SISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       212 a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +..+.......   ....++..|++||
T Consensus       156 ~~~~~~~~~~~---~~~~~~~~~~aPE  179 (268)
T cd06624         156 SKRLAGINPCT---ETFTGTLQYMAPE  179 (268)
T ss_pred             heecccCCCcc---ccCCCCccccChh
Confidence            98765432211   1122345677777

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=2.9e-28  Score=214.42  Aligned_cols=168  Identities=19%  Similarity=0.252  Sum_probs=142.8

Q ss_pred             HHHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhc-CCCceeeEeeEEecCCc
Q 026214           58 KLATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQM-SHDHILKLIGCCLETPI  131 (241)
Q Consensus        58 ~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~  131 (241)
                      ....++|....+||+|+||.|+.+..  ++..+|||.++++.   ....+..+.|-+++... +||.++.++.+|+..++
T Consensus       364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~  443 (694)
T KOG0694|consen  364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEH  443 (694)
T ss_pred             cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCe
Confidence            34457788999999999999999999  88899999999864   23457789999998888 59999999999999999


Q ss_pred             ceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccC
Q 026214          132 PILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL  211 (241)
Q Consensus       132 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~  211 (241)
                      .++||||+.||++..++      ....+++..+..|+..|+.||.|||   +++||+||||.+|||+|.+|.+||+|||+
T Consensus       444 l~fvmey~~Ggdm~~~~------~~~~F~e~rarfyaAev~l~L~fLH---~~~IIYRDlKLdNiLLD~eGh~kiADFGl  514 (694)
T KOG0694|consen  444 LFFVMEYVAGGDLMHHI------HTDVFSEPRARFYAAEVVLGLQFLH---ENGIIYRDLKLDNLLLDTEGHVKIADFGL  514 (694)
T ss_pred             EEEEEEecCCCcEEEEE------ecccccHHHHHHHHHHHHHHHHHHH---hcCceeeecchhheEEcccCcEEeccccc
Confidence            99999999999944444      3467999999999999999999999   99999999999999999999999999999


Q ss_pred             ceecCCC-CccccceeecCCceeeeecC
Q 026214          212 SISIPEG-GTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       212 a~~~~~~-~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ++.--.. .++.+.|    +|+-|+|||
T Consensus       515 cKe~m~~g~~TsTfC----GTpey~aPE  538 (694)
T KOG0694|consen  515 CKEGMGQGDRTSTFC----GTPEFLAPE  538 (694)
T ss_pred             ccccCCCCCcccccc----CChhhcChh
Confidence            9976533 3333333    445577777

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.95  E-value=8.9e-28  Score=204.15  Aligned_cols=160  Identities=19%  Similarity=0.186  Sum_probs=129.4

Q ss_pred             CeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHH-HHHhcCCCceeeEeeEEecCCcceEEEeeCCC
Q 026214           68 NVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIV-YAAQMSHDHILKLIGCCLETPIPILAFESVEY  141 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~  141 (241)
                      +.||+|+||.||+|.+  ++..||+|.+....   ......+..|.. ++..++||||+++++++...+..+++|||+++
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING   80 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence            4689999999999998  77889999987532   122234445544 46778999999999999999999999999999


Q ss_pred             CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCcc
Q 026214          142 GNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTS  221 (241)
Q Consensus       142 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~  221 (241)
                      ++|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.++|+|||+++........
T Consensus        81 ~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~L~~lH---~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~  152 (325)
T cd05602          81 GELFYHLQRE-----RCFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGT  152 (325)
T ss_pred             CcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCC
Confidence            9999999653     34778888899999999999999   999999999999999999999999999999864332211


Q ss_pred             ccceeecCCceeeeecC
Q 026214          222 GAKCLKSERTEICCVRE  238 (241)
Q Consensus       222 ~~~~~~~~~~~~~~~~e  238 (241)
                      .   ....++..|++||
T Consensus       153 ~---~~~~gt~~y~aPE  166 (325)
T cd05602         153 T---STFCGTPEYLAPE  166 (325)
T ss_pred             c---ccccCCccccCHH
Confidence            1   1223455688887

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.95  E-value=2.1e-27  Score=194.73  Aligned_cols=150  Identities=19%  Similarity=0.310  Sum_probs=135.8

Q ss_pred             hcCCCcCCeeecccceEEEEEEECCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCC
Q 026214           61 TNNYDQKNVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVE  140 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~  140 (241)
                      .++|...+.||.|++|.||+|...++.||+|.+..... ..+++.+|+.++..++|+||+++++++.+....+++|||++
T Consensus         5 ~~~~~~~~~ig~g~~g~v~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   83 (256)
T cd05039           5 SKELKLGATIGKGEFGDVMLGDYRGQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMA   83 (256)
T ss_pred             hhhccceeeeecCCCceEEEEEecCcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecC
Confidence            35677889999999999999999999999999976643 46789999999999999999999999998899999999999


Q ss_pred             CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCC
Q 026214          141 YGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE  217 (241)
Q Consensus       141 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~  217 (241)
                      +++|.+++...   ....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++.....
T Consensus        84 ~~~L~~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~  154 (256)
T cd05039          84 KGSLVDYLRSR---GRAVITLAQQLGFALDVCEGMEYLE---EKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQ  154 (256)
T ss_pred             CCcHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHH---hCCccchhcccceEEEeCCCCEEEccccccccccc
Confidence            99999999665   2346899999999999999999999   99999999999999999999999999999987743

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.95  E-value=1.6e-27  Score=196.64  Aligned_cols=171  Identities=17%  Similarity=0.206  Sum_probs=141.2

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CC---eEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceE
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QE---RLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPIL  134 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  134 (241)
                      .++|...+.||+|++|.||+|.+  ++   ..+++|.+.... ......+.+|+.++..++|||++++.+++...+..++
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   83 (268)
T cd05063           4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI   83 (268)
T ss_pred             hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence            34677889999999999999997  33   368999886542 2234668899999999999999999999999999999


Q ss_pred             EEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCcee
Q 026214          135 AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSIS  214 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~  214 (241)
                      +|||+++++|.+++...    ...+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.++++|||++..
T Consensus        84 v~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~  156 (268)
T cd05063          84 ITEYMENGALDKYLRDH----DGEFSSYQLVGMLRGIAAGMKYLS---DMNYVHRDLAARNILVNSNLECKVSDFGLSRV  156 (268)
T ss_pred             EEEcCCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEEcCCCcEEECCCcccee
Confidence            99999999999999654    345899999999999999999999   99999999999999999999999999999987


Q ss_pred             cCCCCccccceeecCCceeeeecC
Q 026214          215 IPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ................+..|++||
T Consensus       157 ~~~~~~~~~~~~~~~~~~~y~~PE  180 (268)
T cd05063         157 LEDDPEGTYTTSGGKIPIRWTAPE  180 (268)
T ss_pred             cccccccceeccCCCcCceecCHH
Confidence            754432222222233344678887

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.95  E-value=1.6e-27  Score=198.59  Aligned_cols=169  Identities=19%  Similarity=0.226  Sum_probs=138.4

Q ss_pred             CCCcCCeeecccceEEEEEEE------CCeEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEecC--Ccce
Q 026214           63 NYDQKNVITEDWGCILYKGFW------QERLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLET--PIPI  133 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~  133 (241)
                      .|...+.||+|+||.||.+.+      ++..||+|.+.... ......+.+|+.+++.++||||+++.+++...  ...+
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (284)
T cd05079           5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK   84 (284)
T ss_pred             hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence            467788999999999999974      57889999987543 23346789999999999999999999998775  5689


Q ss_pred             EEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCce
Q 026214          134 LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSI  213 (241)
Q Consensus       134 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~  213 (241)
                      ++|||+++++|.+++...    ...+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.++|+|||++.
T Consensus        85 lv~e~~~g~~L~~~l~~~----~~~~~~~~~~~i~~~i~~aL~~lH---~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~  157 (284)
T cd05079          85 LIMEFLPSGSLKEYLPRN----KNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTK  157 (284)
T ss_pred             EEEEccCCCCHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccchheEEEcCCCCEEECCCcccc
Confidence            999999999999999654    235899999999999999999999   9999999999999999999999999999999


Q ss_pred             ecCCCCccccceeecCCceeeeecC
Q 026214          214 SIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .+...............+..|++||
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~y~apE  182 (284)
T cd05079         158 AIETDKEYYTVKDDLDSPVFWYAPE  182 (284)
T ss_pred             ccccCccceeecCCCCCCccccCHH
Confidence            8765433221111122334567777

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.95  E-value=2.1e-27  Score=196.29  Aligned_cols=167  Identities=17%  Similarity=0.161  Sum_probs=132.6

Q ss_pred             CeeecccceEEEEEEE----CCeEEEEEEeeccCC-cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCCCC
Q 026214           68 NVITEDWGCILYKGFW----QERLISVMRFRESNR-DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYG  142 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g  142 (241)
                      +.||+|+||.||+|..    ++..+++|.+..... .....+.+|+.+++.++||||+++++++.+....+++|||+++|
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g   80 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG   80 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence            3689999999999986    346789998865432 23356888999999999999999999999999999999999999


Q ss_pred             CHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCccc
Q 026214          143 NLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSG  222 (241)
Q Consensus       143 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~~  222 (241)
                      +|.+++...........++..+..++.|++.||.|||   +.+++|+||||+||+++.++.++++|||++..........
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~  157 (269)
T cd05087          81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLH---KNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV  157 (269)
T ss_pred             cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEECCccccccccCcceee
Confidence            9999997642222345677788899999999999999   9999999999999999999999999999997654333221


Q ss_pred             cceeecCCceeeeecC
Q 026214          223 AKCLKSERTEICCVRE  238 (241)
Q Consensus       223 ~~~~~~~~~~~~~~~e  238 (241)
                      .. .....+..|++||
T Consensus       158 ~~-~~~~~~~~y~aPE  172 (269)
T cd05087         158 TP-DQLWVPLRWIAPE  172 (269)
T ss_pred             cC-CCcCCcccccCHh
Confidence            11 1112234567777

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.95  E-value=2.2e-27  Score=197.26  Aligned_cols=159  Identities=16%  Similarity=0.216  Sum_probs=133.2

Q ss_pred             eecccceEEEEEEE--CCeEEEEEEeeccCC---cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCCCCCH
Q 026214           70 ITEDWGCILYKGFW--QERLISVMRFRESNR---DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNL  144 (241)
Q Consensus        70 lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL  144 (241)
                      ||+|+||.||++..  ++..||+|.+.....   .....+..|+.++..++||||+++.+++......+++|||+++++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            68999999999998  789999999865321   1234456799999999999999999999999999999999999999


Q ss_pred             HHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCccccc
Q 026214          145 RDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAK  224 (241)
Q Consensus       145 ~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~~~~  224 (241)
                      .+++...   ....+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.++|+|||++..+......   
T Consensus        81 ~~~~~~~---~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~---  151 (277)
T cd05607          81 KYHIYNV---GERGLEMERVIHYSAQITCGILHLH---SMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTI---  151 (277)
T ss_pred             HHHHHhc---cccCCCHHHHHHHHHHHHHHHHHHH---HCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCcee---
Confidence            9988654   2345889999999999999999999   999999999999999999999999999999877543221   


Q ss_pred             eeecCCceeeeecC
Q 026214          225 CLKSERTEICCVRE  238 (241)
Q Consensus       225 ~~~~~~~~~~~~~e  238 (241)
                       ....++..|++||
T Consensus       152 -~~~~~~~~y~aPE  164 (277)
T cd05607         152 -TQRAGTNGYMAPE  164 (277)
T ss_pred             -eccCCCCCccCHH
Confidence             1223445677887

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.95  E-value=1.1e-27  Score=203.09  Aligned_cols=160  Identities=21%  Similarity=0.219  Sum_probs=133.3

Q ss_pred             CeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhc-CCCceeeEeeEEecCCcceEEEeeCCC
Q 026214           68 NVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQM-SHDHILKLIGCCLETPIPILAFESVEY  141 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~  141 (241)
                      +.||+|+||.||+|.+  ++..||+|.+....   ......+.+|..++..+ +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   80 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG   80 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            4699999999999998  67899999998642   23345678899999888 799999999999999999999999999


Q ss_pred             CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCcc
Q 026214          142 GNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTS  221 (241)
Q Consensus       142 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~  221 (241)
                      ++|...+...     ..+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.++|+|||+++........
T Consensus        81 ~~L~~~~~~~-----~~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~  152 (318)
T cd05570          81 GDLMFHIQRS-----GRFDEPRARFYAAEIVLGLQFLH---ERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVT  152 (318)
T ss_pred             CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCc
Confidence            9999988554     35899999999999999999999   999999999999999999999999999999764332221


Q ss_pred             ccceeecCCceeeeecC
Q 026214          222 GAKCLKSERTEICCVRE  238 (241)
Q Consensus       222 ~~~~~~~~~~~~~~~~e  238 (241)
                      ..   ...++..|++||
T Consensus       153 ~~---~~~g~~~y~aPE  166 (318)
T cd05570         153 TS---TFCGTPDYIAPE  166 (318)
T ss_pred             cc---ceecCccccCHH
Confidence            11   112445677887

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.95  E-value=2e-27  Score=198.37  Aligned_cols=165  Identities=19%  Similarity=0.222  Sum_probs=138.3

Q ss_pred             CCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC---cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           64 YDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR---DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        64 ~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      |...+.||.|+||.||++.+  ++..+|+|.+.....   .....+.+|+.++..++|+|++++.+++..++..++++||
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence            56678899999999999998  788999999865421   2234578899999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      +++++|.+++...   ....+++..+..++.|++.||.|||   +.+|+||||||+||+++.++.++|+|||++......
T Consensus        82 ~~~~~L~~~~~~~---~~~~~~~~~~~~~~~ql~~~l~~lH---~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~  155 (285)
T cd05632          82 MNGGDLKFHIYNM---GNPGFEEERALFYAAEILCGLEDLH---RENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEG  155 (285)
T ss_pred             ccCccHHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEECCCCCEEEecCCcceecCCC
Confidence            9999999988654   2346899999999999999999999   999999999999999999999999999999876433


Q ss_pred             CccccceeecCCceeeeecC
Q 026214          219 GTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ...    ....++..|++||
T Consensus       156 ~~~----~~~~g~~~~~aPE  171 (285)
T cd05632         156 ESI----RGRVGTVGYMAPE  171 (285)
T ss_pred             Ccc----cCCCCCcCccChH
Confidence            221    1123455677777

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.95  E-value=8.1e-28  Score=208.04  Aligned_cols=165  Identities=18%  Similarity=0.197  Sum_probs=136.8

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEecCC-----cce
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLETP-----IPI  133 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~  133 (241)
                      +|+..+.||+|+||.||++.+  ++..||+|.+....  ....+.+.+|+.++..++||||+++++++...+     ..+
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~   80 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY   80 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence            477889999999999999998  78999999986532  223467889999999999999999999998776     789


Q ss_pred             EEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCce
Q 026214          134 LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSI  213 (241)
Q Consensus       134 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~  213 (241)
                      +++||+. ++|.+.+..     ...+++..+..++.|++.||.|||   +.+++||||||+|||++.++.+||+|||+++
T Consensus        81 lv~e~~~-~~l~~~~~~-----~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~  151 (372)
T cd07853          81 VVTELMQ-SDLHKIIVS-----PQPLSSDHVKVFLYQILRGLKYLH---SAGILHRDIKPGNLLVNSNCVLKICDFGLAR  151 (372)
T ss_pred             EEeeccc-cCHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChHHEEECCCCCEEecccccee
Confidence            9999997 688888844     345899999999999999999999   9999999999999999999999999999998


Q ss_pred             ecCCCCccccceeecCCceeeeecC
Q 026214          214 SIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ....+.....  .....+..|.+||
T Consensus       152 ~~~~~~~~~~--~~~~~~~~y~aPE  174 (372)
T cd07853         152 VEEPDESKHM--TQEVVTQYYRAPE  174 (372)
T ss_pred             ecccCccccC--CCCCcCCCcCCHH
Confidence            7654432211  1122345677777

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.95  E-value=1.4e-27  Score=196.76  Aligned_cols=168  Identities=20%  Similarity=0.312  Sum_probs=141.0

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeC
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESV  139 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  139 (241)
                      ..|...+.||.|++|.||+|.+  ++..|++|.+.... .....+.+|+.++..++||||+++++++..++..+++|||+
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (263)
T cd05052           6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM   84 (263)
T ss_pred             HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence            3467788999999999999998  68899999987543 34567899999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCC
Q 026214          140 EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGG  219 (241)
Q Consensus       140 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~  219 (241)
                      ++++|.+++...   ....+++..++.++.|++.||.|||   +.+++|+||||+||++++++.+||+|||++.....+.
T Consensus        85 ~~~~L~~~~~~~---~~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~  158 (263)
T cd05052          85 TYGNLLDYLREC---NRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT  158 (263)
T ss_pred             CCCcHHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCcEEeCCCccccccccce
Confidence            999999999654   2345899999999999999999999   9999999999999999999999999999998775543


Q ss_pred             ccccceeecCCceeeeecC
Q 026214          220 TSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~e  238 (241)
                      ....  .....+..|.+||
T Consensus       159 ~~~~--~~~~~~~~y~aPE  175 (263)
T cd05052         159 YTAH--AGAKFPIKWTAPE  175 (263)
T ss_pred             eecc--CCCCCccccCCHH
Confidence            2111  1112233577777

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.95  E-value=1.3e-27  Score=222.20  Aligned_cols=151  Identities=19%  Similarity=0.221  Sum_probs=131.6

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC---cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR---DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      ++|...++||+|+||.||+|.+  +++.||+|++.....   ...+++.+|+.+++.++||||+++++++..++..+++|
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM   81 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM   81 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence            4688889999999999999998  789999999875422   22456899999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCC------CCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEcccc
Q 026214          137 ESVEYGNLRDRILSASQ------PQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFS  210 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~------~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG  210 (241)
                      ||+++++|.+++.....      .....+++..++.++.|++.||.|||   +.+|+||||||+|||++.++.++|+|||
T Consensus        82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLH---s~GIIHRDLKPeNILLd~dg~vKLiDFG  158 (932)
T PRK13184         82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVH---SKGVLHRDLKPDNILLGLFGEVVILDWG  158 (932)
T ss_pred             EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHH---HCCccccCCchheEEEcCCCCEEEEecC
Confidence            99999999999864211      01234567788999999999999999   9999999999999999999999999999


Q ss_pred             Cceec
Q 026214          211 LSISI  215 (241)
Q Consensus       211 ~a~~~  215 (241)
                      ++...
T Consensus       159 LAk~i  163 (932)
T PRK13184        159 AAIFK  163 (932)
T ss_pred             cceec
Confidence            99877

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.95  E-value=5e-29  Score=201.77  Aligned_cols=172  Identities=19%  Similarity=0.181  Sum_probs=142.4

Q ss_pred             hcCCCcCCeeecccceEEEEEEE----C--CeEEEEEEeeccCC--cchhhHHHHHHHHHhcCCCceeeEeeEEec-CCc
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW----Q--ERLISVMRFRESNR--DGHGSCINNIVYAAQMSHDHILKLIGCCLE-TPI  131 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~----~--~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~  131 (241)
                      ...|.....||+|+||.||+|..    +  ...+|+|+++....  .-.....+|+.+++.++||||+.|..++.. +..
T Consensus        23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~  102 (438)
T KOG0666|consen   23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKK  102 (438)
T ss_pred             HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCce
Confidence            34578888999999999999976    2  23789999976532  224678999999999999999999999987 788


Q ss_pred             ceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCC----CcEEEc
Q 026214          132 PILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEE----NVAKMF  207 (241)
Q Consensus       132 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~----~~~ki~  207 (241)
                      .||++||.+. +|...++.........++...+..|+-||+.|+.|||   ++=|+||||||+|||+..+    |.+||+
T Consensus       103 v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH---~NWvlHRDLKPaNIlvmgdgperG~VKIa  178 (438)
T KOG0666|consen  103 VWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLH---SNWVLHRDLKPANILVMGDGPERGRVKIA  178 (438)
T ss_pred             EEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHh---hhheeeccCCcceEEEeccCCccCeeEee
Confidence            9999999985 9999998776555677999999999999999999999   8889999999999999766    999999


Q ss_pred             cccCceecCCCCccc--cceeecCCceeeeecC
Q 026214          208 DFSLSISIPEGGTSG--AKCLKSERTEICCVRE  238 (241)
Q Consensus       208 DfG~a~~~~~~~~~~--~~~~~~~~~~~~~~~e  238 (241)
                      |||+|+.+..+-...  ...++  -|-||.|||
T Consensus       179 DlGlaR~~~~plkpl~s~d~VV--VTiWYRAPE  209 (438)
T KOG0666|consen  179 DLGLARLFNNPLKPLASLDPVV--VTIWYRAPE  209 (438)
T ss_pred             cccHHHHhhccccccccCCceE--EEEEecChH
Confidence            999999997764322  11122  245788887

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.95  E-value=1.7e-27  Score=201.34  Aligned_cols=166  Identities=18%  Similarity=0.125  Sum_probs=131.2

Q ss_pred             CCeeecccceEEEEEEE----CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEec--CCcceEEEeeCC
Q 026214           67 KNVITEDWGCILYKGFW----QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLE--TPIPILAFESVE  140 (241)
Q Consensus        67 ~~~lg~G~~g~Vy~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~~~  140 (241)
                      ..+||+|+||.||+|.+    ++..||+|.+....  ....+.+|+.+++.++||||+++++++..  +...++++||+.
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~   83 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE   83 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence            56899999999999986    45789999886543  23557899999999999999999998854  456889999996


Q ss_pred             CCCHHHHHhhcCC----CCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeE----cCCCcEEEccccCc
Q 026214          141 YGNLRDRILSASQ----PQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILF----NEENVAKMFDFSLS  212 (241)
Q Consensus       141 ~gsL~~~l~~~~~----~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill----~~~~~~ki~DfG~a  212 (241)
                       ++|.+++.....    .....+++..+..++.|++.||.|||   +.+|+||||||+|||+    +..+.+||+|||+|
T Consensus        84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a  159 (317)
T cd07868          84 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFA  159 (317)
T ss_pred             -CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence             589888754311    12335889999999999999999999   9999999999999999    45678999999999


Q ss_pred             eecCCCCccccceeecCCceeeeecC
Q 026214          213 ISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +.+..+...........++..|+|||
T Consensus       160 ~~~~~~~~~~~~~~~~~~t~~y~aPE  185 (317)
T cd07868         160 RLFNSPLKPLADLDPVVVTFWYRAPE  185 (317)
T ss_pred             eccCCCCccccccCCccccccccCCH
Confidence            98765433222222233455688888

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.95  E-value=3.2e-27  Score=197.11  Aligned_cols=165  Identities=18%  Similarity=0.224  Sum_probs=138.0

Q ss_pred             CCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCc---chhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           64 YDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRD---GHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        64 ~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      |...+.||+|+||.||++.+  +++.||+|.+......   ....+.+|+.++..++|++++++.+.+.+.+..+++|||
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL   81 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence            66678999999999999998  7899999998754322   234577899999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      +++++|.+++...   ....+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.++|+|||++......
T Consensus        82 ~~g~~L~~~l~~~---~~~~l~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~  155 (285)
T cd05630          82 MNGGDLKFHIYHM---GEAGFEEGRAVFYAAEICCGLEDLH---QERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG  155 (285)
T ss_pred             cCCCcHHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCC
Confidence            9999999998654   2345899999999999999999999   999999999999999999999999999999876543


Q ss_pred             CccccceeecCCceeeeecC
Q 026214          219 GTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ....    ...++..|.+||
T Consensus       156 ~~~~----~~~g~~~y~aPE  171 (285)
T cd05630         156 QTIK----GRVGTVGYMAPE  171 (285)
T ss_pred             cccc----CCCCCccccChH
Confidence            3221    112345567776

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.95  E-value=2.2e-27  Score=199.19  Aligned_cols=165  Identities=16%  Similarity=0.229  Sum_probs=142.0

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeC
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESV  139 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  139 (241)
                      ..|...+.||.|++|.||++..  ++..||+|.+..........+.+|+.+++.++||||+++++++..++..++||||+
T Consensus        19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~   98 (297)
T cd06656          19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   98 (297)
T ss_pred             hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeeccc
Confidence            5688889999999999999997  78999999987665555677889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCC
Q 026214          140 EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGG  219 (241)
Q Consensus       140 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~  219 (241)
                      ++++|.+++..      ..+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++.....+.
T Consensus        99 ~~~~L~~~~~~------~~~~~~~~~~~~~~l~~~L~~LH---~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~  169 (297)
T cd06656          99 AGGSLTDVVTE------TCMDEGQIAAVCRECLQALDFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ  169 (297)
T ss_pred             CCCCHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEECcCccceEccCCc
Confidence            99999999843      34788999999999999999999   9999999999999999999999999999998775543


Q ss_pred             ccccceeecCCceeeeecC
Q 026214          220 TSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~e  238 (241)
                      ....   ....+..|++||
T Consensus       170 ~~~~---~~~~~~~y~aPE  185 (297)
T cd06656         170 SKRS---TMVGTPYWMAPE  185 (297)
T ss_pred             cCcC---cccCCccccCHH
Confidence            3221   122344577777

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.95  E-value=2.6e-27  Score=194.39  Aligned_cols=147  Identities=20%  Similarity=0.303  Sum_probs=130.5

Q ss_pred             CCCcCCeeecccceEEEEEEE-CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCCC
Q 026214           63 NYDQKNVITEDWGCILYKGFW-QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEY  141 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~  141 (241)
                      .|...+.||+|++|.||++.+ ++..+|+|.+.... .....+.+|+.+++.++||||+++++++...+..+++|||+++
T Consensus         5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~   83 (256)
T cd05059           5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN   83 (256)
T ss_pred             HcchhhhhccCCCceEEEeEecCCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence            366778999999999999988 66689999886543 2345688999999999999999999999999999999999999


Q ss_pred             CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCC
Q 026214          142 GNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE  217 (241)
Q Consensus       142 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~  217 (241)
                      ++|.+++...    ...+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.+||+|||+++....
T Consensus        84 ~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~  152 (256)
T cd05059          84 GCLLNYLRER----KGKLGTEWLLDMCSDVCEAMEYLE---SNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLD  152 (256)
T ss_pred             CCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHH---HCCcccccccHhhEEECCCCcEEECCcccceeccc
Confidence            9999999654    235899999999999999999999   99999999999999999999999999999987654

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.95  E-value=1.2e-27  Score=211.20  Aligned_cols=166  Identities=15%  Similarity=0.216  Sum_probs=132.9

Q ss_pred             HhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecC--------
Q 026214           60 ATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLET--------  129 (241)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--------  129 (241)
                      ...+|...+.||+|+||.||+|.+  ++..||||++....    ....+|+.+++.++||||+++.+++...        
T Consensus        64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~  139 (440)
T PTZ00036         64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN  139 (440)
T ss_pred             cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence            346788999999999999999998  78899999886542    2345799999999999999999887432        


Q ss_pred             CcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCC-CcEEEcc
Q 026214          130 PIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEE-NVAKMFD  208 (241)
Q Consensus       130 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~-~~~ki~D  208 (241)
                      ...+++|||++ ++|.+++..... ....+++..+..++.|++.||.|||   +.+|+||||||+|||++.+ +.+||+|
T Consensus       140 ~~l~lvmE~~~-~~l~~~~~~~~~-~~~~l~~~~~~~~~~qi~~gL~yLH---~~~IiHrDLKp~NILl~~~~~~vkL~D  214 (440)
T PTZ00036        140 IFLNVVMEFIP-QTVHKYMKHYAR-NNHALPLFLVKLYSYQLCRALAYIH---SKFICHRDLKPQNLLIDPNTHTLKLCD  214 (440)
T ss_pred             eEEEEEEecCC-ccHHHHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCcCHHHEEEcCCCCceeeec
Confidence            24678999998 588877754311 2456899999999999999999999   9999999999999999865 4799999


Q ss_pred             ccCceecCCCCccccceeecCCceeeeecC
Q 026214          209 FSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       209 fG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ||+|+.+.......    ...++..|+|||
T Consensus       215 FGla~~~~~~~~~~----~~~~t~~y~aPE  240 (440)
T PTZ00036        215 FGSAKNLLAGQRSV----SYICSRFYRAPE  240 (440)
T ss_pred             cccchhccCCCCcc----cCCCCcCccCHH
Confidence            99999775543222    123355688888

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.95  E-value=3e-27  Score=196.69  Aligned_cols=166  Identities=22%  Similarity=0.335  Sum_probs=135.1

Q ss_pred             CCcCCeeecccceEEEEEEE------CCeEEEEEEeeccCC-cchhhHHHHHHHHHhcCCCceeeEeeEEecC--CcceE
Q 026214           64 YDQKNVITEDWGCILYKGFW------QERLISVMRFRESNR-DGHGSCINNIVYAAQMSHDHILKLIGCCLET--PIPIL  134 (241)
Q Consensus        64 ~~~~~~lg~G~~g~Vy~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l  134 (241)
                      |...+.||+|+||.||.+.+      ++..||+|.+..... .....+.+|+.+++.++||||+++++++...  ...++
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (283)
T cd05080           6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL   85 (283)
T ss_pred             ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence            37788999999999988753      567899999876432 2356788999999999999999999988654  35789


Q ss_pred             EEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCcee
Q 026214          135 AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSIS  214 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~  214 (241)
                      +|||+++++|.+++...      .+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.++|+|||++..
T Consensus        86 v~e~~~~~~l~~~~~~~------~l~~~~~~~i~~~l~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~  156 (283)
T cd05080          86 IMEYVPLGSLRDYLPKH------KLNLAQLLLFAQQICEGMAYLH---SQHYIHRDLAARNVLLDNDRLVKIGDFGLAKA  156 (283)
T ss_pred             EecCCCCCCHHHHHHHc------CCCHHHHHHHHHHHHHHHHHHH---HCCeeccccChheEEEcCCCcEEEeecccccc
Confidence            99999999999999543      4899999999999999999999   99999999999999999999999999999987


Q ss_pred             cCCCCccccceeecCCceeeeecC
Q 026214          215 IPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +..+.........+..+..|++||
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~PE  180 (283)
T cd05080         157 VPEGHEYYRVREDGDSPVFWYAVE  180 (283)
T ss_pred             cCCcchhhccCCCCCCCceeeCHh
Confidence            765433221112223344567777

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=6.1e-29  Score=215.53  Aligned_cols=160  Identities=19%  Similarity=0.276  Sum_probs=139.6

Q ss_pred             CCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCc---chhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           64 YDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRD---GHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        64 ~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      |...+.||.|+||.||-+++  +...||||++.-...+   .+..++.|+..|.+++|||++.+.|||......||||||
T Consensus        28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY  107 (948)
T KOG0577|consen   28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY  107 (948)
T ss_pred             HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence            66678899999999999999  8899999998754433   356789999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      |- ||-.|++.-.    ..++.+-.+..|+.+.+.||+|||   +.+.||||||+.|||+++.|.+|++|||.|....+.
T Consensus       108 Cl-GSAsDlleVh----kKplqEvEIAAi~~gaL~gLaYLH---S~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PA  179 (948)
T KOG0577|consen  108 CL-GSASDLLEVH----KKPLQEVEIAAITHGALQGLAYLH---SHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPA  179 (948)
T ss_pred             Hh-ccHHHHHHHH----hccchHHHHHHHHHHHHHHHHHHH---HhhHHhhhccccceEecCCCeeeeccccchhhcCch
Confidence            97 6988888665    667999999999999999999999   999999999999999999999999999999887766


Q ss_pred             CccccceeecCCceeeeecC
Q 026214          219 GTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .+-.       +|+-|+|||
T Consensus       180 nsFv-------GTPywMAPE  192 (948)
T KOG0577|consen  180 NSFV-------GTPYWMAPE  192 (948)
T ss_pred             hccc-------CCccccchh
Confidence            5322       344557776

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.95  E-value=3.3e-28  Score=210.57  Aligned_cols=153  Identities=21%  Similarity=0.256  Sum_probs=134.4

Q ss_pred             cCCCcCCeeecccceEEEEEEEC-CeEEEEEEeeccCCcch-hhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeC
Q 026214           62 NNYDQKNVITEDWGCILYKGFWQ-ERLISVMRFRESNRDGH-GSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESV  139 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~~~-~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  139 (241)
                      ......++||+|-||.|..|... +..||+|.++.+..... .+|..|+++|.+|+||||+.++|+|..++.+++++|||
T Consensus       538 s~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYm  617 (807)
T KOG1094|consen  538 SRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYM  617 (807)
T ss_pred             hheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHH
Confidence            44556789999999999999984 59999999998765554 88999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCC
Q 026214          140 EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGG  219 (241)
Q Consensus       140 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~  219 (241)
                      ++|+|.+++..+.-   ..+......+|+.||+.||+||.   +.++||||+.++|+|++.++++||+|||.++.+-+..
T Consensus       618 EnGDLnqFl~ahea---pt~~t~~~vsi~tqiasgmaYLe---s~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~  691 (807)
T KOG1094|consen  618 ENGDLNQFLSAHEL---PTAETAPGVSICTQIASGMAYLE---SLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGD  691 (807)
T ss_pred             hcCcHHHHHHhccC---cccccchhHHHHHHHHHHHHHHH---hhchhhccccccceeecCcccEEecCcccccccccCC
Confidence            99999999977621   22445566789999999999999   9999999999999999999999999999999665544


Q ss_pred             c
Q 026214          220 T  220 (241)
Q Consensus       220 ~  220 (241)
                      .
T Consensus       692 y  692 (807)
T KOG1094|consen  692 Y  692 (807)
T ss_pred             c
Confidence            3

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.95  E-value=2.3e-27  Score=206.92  Aligned_cols=178  Identities=16%  Similarity=0.223  Sum_probs=141.6

Q ss_pred             HHHHhcCCCcCCeeecccceEEEEEEE-------CCeEEEEEEeeccCC-cchhhHHHHHHHHHhcC-CCceeeEeeEEe
Q 026214           57 LKLATNNYDQKNVITEDWGCILYKGFW-------QERLISVMRFRESNR-DGHGSCINNIVYAAQMS-HDHILKLIGCCL  127 (241)
Q Consensus        57 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~  127 (241)
                      +....++|...+.||+|+||.||+|.+       .+..||+|++..... .....+.+|+.++.++. ||||+++++++.
T Consensus        32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~  111 (401)
T cd05107          32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACT  111 (401)
T ss_pred             ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEc
Confidence            455556788889999999999999986       236799999976432 22356889999999997 999999999999


Q ss_pred             cCCcceEEEeeCCCCCHHHHHhhcCC------------------------------------------------------
Q 026214          128 ETPIPILAFESVEYGNLRDRILSASQ------------------------------------------------------  153 (241)
Q Consensus       128 ~~~~~~lv~e~~~~gsL~~~l~~~~~------------------------------------------------------  153 (241)
                      ..+..++|+||+++|+|.+++.....                                                      
T Consensus       112 ~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (401)
T cd05107         112 KGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVP  191 (401)
T ss_pred             cCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccc
Confidence            99999999999999999999975421                                                      


Q ss_pred             ---------------------------------------CCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCC
Q 026214          154 ---------------------------------------PQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTA  194 (241)
Q Consensus       154 ---------------------------------------~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~  194 (241)
                                                             .....+++..+..++.|++.||.|||   +.+++||||||+
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrdlkp~  268 (401)
T cd05107         192 MQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLA---SKNCVHRDLAAR  268 (401)
T ss_pred             hhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHh---cCCcCcccCCcc
Confidence                                                   01124677888999999999999999   999999999999


Q ss_pred             CeeEcCCCcEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          195 HILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       195 Nill~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |||++.++.++|+|||+++.+..+...... .....+..|++||
T Consensus       269 NiLl~~~~~~kL~DfGla~~~~~~~~~~~~-~~~~~~~~y~aPE  311 (401)
T cd05107         269 NVLICEGKLVKICDFGLARDIMRDSNYISK-GSTFLPLKWMAPE  311 (401)
T ss_pred             eEEEeCCCEEEEEecCcceecccccccccC-CCcCCCCceeChH
Confidence            999999999999999999876443221111 1112244577887

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.95  E-value=3.2e-27  Score=196.57  Aligned_cols=172  Identities=22%  Similarity=0.250  Sum_probs=138.3

Q ss_pred             CCCcCCeeecccceEEEEEEE------CCeEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEE
Q 026214           63 NYDQKNVITEDWGCILYKGFW------QERLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA  135 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  135 (241)
                      .|...+.||+|+||.||+|.+      .+..|++|.+.... ......+.+|+.+++.++||||+++++++......+++
T Consensus         6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv   85 (283)
T cd05090           6 AVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCML   85 (283)
T ss_pred             hceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEEE
Confidence            466778999999999999985      45789999987533 22335688999999999999999999999999999999


Q ss_pred             EeeCCCCCHHHHHhhcCC------------CCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCc
Q 026214          136 FESVEYGNLRDRILSASQ------------PQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENV  203 (241)
Q Consensus       136 ~e~~~~gsL~~~l~~~~~------------~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~  203 (241)
                      |||+++++|.+++.....            .....+++..++.++.|++.||.|||   +.+++|+||||+|||++.++.
T Consensus        86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~nili~~~~~  162 (283)
T cd05090          86 FEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLS---SHFFVHKDLAARNILIGEQLH  162 (283)
T ss_pred             EEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hcCeehhccccceEEEcCCCc
Confidence            999999999999854310            01234788899999999999999999   999999999999999999999


Q ss_pred             EEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          204 AKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       204 ~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ++|+|||+++.+........ ......+..|++||
T Consensus       163 ~kl~dfg~~~~~~~~~~~~~-~~~~~~~~~y~aPE  196 (283)
T cd05090         163 VKISDLGLSREIYSADYYRV-QPKSLLPIRWMPPE  196 (283)
T ss_pred             EEeccccccccccCCcceec-ccCCCccceecChH
Confidence            99999999987754432111 11222244577887

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.95  E-value=5.9e-28  Score=223.72  Aligned_cols=172  Identities=22%  Similarity=0.346  Sum_probs=142.1

Q ss_pred             cCCCcCCeeecccceEEEEEEE---CC----eEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcce
Q 026214           62 NNYDQKNVITEDWGCILYKGFW---QE----RLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPI  133 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~---~~----~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  133 (241)
                      .+......||+|.||.||.|.+   .+    ..||+|.+.+.. .+....|++|..+|+.++|||||+++|++.+....+
T Consensus       692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~  771 (1025)
T KOG1095|consen  692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPL  771 (1025)
T ss_pred             hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcE
Confidence            3345578899999999999998   33    348999998764 345678999999999999999999999999999999


Q ss_pred             EEEeeCCCCCHHHHHhhcCCC--CCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccC
Q 026214          134 LAFESVEYGNLRDRILSASQP--QTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL  211 (241)
Q Consensus       134 lv~e~~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~  211 (241)
                      +++|||.+|+|..+|.+.+..  +...++..+.+.++.||++|+.||+   ++++|||||.++|+||+....+||+|||+
T Consensus       772 i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe---~~~fvHRDLAaRNCLL~~~r~VKIaDFGl  848 (1025)
T KOG1095|consen  772 ILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLE---SKHFVHRDLAARNCLLDERRVVKIADFGL  848 (1025)
T ss_pred             EEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHH---hCCCcCcchhhhheeecccCcEEEcccch
Confidence            999999999999999875221  2556889999999999999999999   99999999999999999999999999999


Q ss_pred             ceec-CCCCccccceeecCCceeeeecC
Q 026214          212 SISI-PEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       212 a~~~-~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |+.+ ..+-.....  .+..+--|+|||
T Consensus       849 ArDiy~~~yyr~~~--~a~lPvkWm~PE  874 (1025)
T KOG1095|consen  849 ARDIYDKDYYRKHG--EAMLPVKWMPPE  874 (1025)
T ss_pred             hHhhhhchheeccC--ccccceecCCHH
Confidence            9944 333221111  134445668887

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=1.6e-27  Score=198.02  Aligned_cols=168  Identities=15%  Similarity=0.152  Sum_probs=142.1

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      .++|...+.||.|++|.||++.+  ++..+|+|.+........+.+.+|+.+++.++||||+++++++..+...+++|||
T Consensus         4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (280)
T cd06611           4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF   83 (280)
T ss_pred             hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence            35577788999999999999998  6889999998766545567789999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      +++++|.+++...    ...+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++......
T Consensus        84 ~~~~~L~~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~  156 (280)
T cd06611          84 CDGGALDSIMLEL----ERGLTEPQIRYVCRQMLEALNFLH---SHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKST  156 (280)
T ss_pred             cCCCcHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEECCCCCEEEccCccchhhccc
Confidence            9999999998654    345899999999999999999999   999999999999999999999999999998766443


Q ss_pred             CccccceeecCCceeeeecC
Q 026214          219 GTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .....   ....+..|.+||
T Consensus       157 ~~~~~---~~~~~~~y~~PE  173 (280)
T cd06611         157 LQKRD---TFIGTPYWMAPE  173 (280)
T ss_pred             ccccc---eeecchhhcCHH
Confidence            22211   112333466666

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.95  E-value=3.9e-27  Score=195.91  Aligned_cols=165  Identities=19%  Similarity=0.178  Sum_probs=138.6

Q ss_pred             CCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCCC
Q 026214           64 YDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEY  141 (241)
Q Consensus        64 ~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~  141 (241)
                      |...+.||.|+||.||++.+  ++..+++|.+..........+.+|+.++..++||||+++++++...+..++++||+++
T Consensus         7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~   86 (282)
T cd06643           7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG   86 (282)
T ss_pred             HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence            44567899999999999998  6788999998765545567789999999999999999999999999999999999999


Q ss_pred             CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCcc
Q 026214          142 GNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTS  221 (241)
Q Consensus       142 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~  221 (241)
                      ++|..++...    ..++++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++.........
T Consensus        87 ~~l~~~~~~~----~~~l~~~~~~~~~~qi~~~L~~LH---~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~  159 (282)
T cd06643          87 GAVDAVMLEL----ERPLTEPQIRVVCKQTLEALNYLH---ENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQR  159 (282)
T ss_pred             CcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEccCCCEEEccccccccccccccc
Confidence            9999888653    346899999999999999999999   999999999999999999999999999999765432211


Q ss_pred             ccceeecCCceeeeecC
Q 026214          222 GAKCLKSERTEICCVRE  238 (241)
Q Consensus       222 ~~~~~~~~~~~~~~~~e  238 (241)
                      .   .....+..|++||
T Consensus       160 ~---~~~~~~~~y~aPE  173 (282)
T cd06643         160 R---DSFIGTPYWMAPE  173 (282)
T ss_pred             c---ccccccccccCHh
Confidence            1   1112344677877

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.95  E-value=4.3e-27  Score=193.90  Aligned_cols=170  Identities=17%  Similarity=0.253  Sum_probs=141.3

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      ++|...+.||.|+||.||+|..  ++..||+|.+....   ......+.+|+.+++.++||||+++++++...+..++++
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL   81 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence            4688899999999999999998  88999999876432   222356889999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||+++++|.+++..... ....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++..+.
T Consensus        82 e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~  157 (267)
T cd08228          82 ELADAGDLSQMIKYFKK-QKRLIPERTVWKYFVQLCSAVEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS  157 (267)
T ss_pred             EecCCCcHHHHHHHhhh-ccCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCCHHHEEEcCCCCEEECccccceecc
Confidence            99999999998865321 2345788999999999999999999   9999999999999999999999999999998776


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ......   .....+..|++||
T Consensus       158 ~~~~~~---~~~~~~~~~~aPE  176 (267)
T cd08228         158 SKTTAA---HSLVGTPYYMSPE  176 (267)
T ss_pred             chhHHH---hcCCCCccccChh
Confidence            543211   1223444677887

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.95  E-value=2.7e-27  Score=198.62  Aligned_cols=165  Identities=16%  Similarity=0.231  Sum_probs=141.4

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeC
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESV  139 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  139 (241)
                      .+|...+.||.|++|.||+|.+  ++..|++|.+..........+.+|+.+++.++||||+++++.+......++||||+
T Consensus        20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~   99 (296)
T cd06654          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   99 (296)
T ss_pred             cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence            5677888999999999999997  78899999988765555677899999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCC
Q 026214          140 EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGG  219 (241)
Q Consensus       140 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~  219 (241)
                      ++++|.+++..      ..+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++.......
T Consensus       100 ~~~~L~~~~~~------~~~~~~~~~~i~~ql~~aL~~LH---~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~  170 (296)
T cd06654         100 AGGSLTDVVTE------TCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ  170 (296)
T ss_pred             CCCCHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEECccccchhccccc
Confidence            99999999843      34788999999999999999999   9999999999999999999999999999998765443


Q ss_pred             ccccceeecCCceeeeecC
Q 026214          220 TSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~e  238 (241)
                      ....   ...++..|++||
T Consensus       171 ~~~~---~~~~~~~y~aPE  186 (296)
T cd06654         171 SKRS---TMVGTPYWMAPE  186 (296)
T ss_pred             cccC---cccCCccccCHH
Confidence            2211   122444677777

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=1.7e-27  Score=202.81  Aligned_cols=158  Identities=17%  Similarity=0.098  Sum_probs=129.0

Q ss_pred             eecccceEEEEEEE--CCeEEEEEEeeccCC---cchhhHHHHHHHHHhc---CCCceeeEeeEEecCCcceEEEeeCCC
Q 026214           70 ITEDWGCILYKGFW--QERLISVMRFRESNR---DGHGSCINNIVYAAQM---SHDHILKLIGCCLETPIPILAFESVEY  141 (241)
Q Consensus        70 lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~~~lv~e~~~~  141 (241)
                      ||+|+||.||+|.+  ++..||+|.+.....   .....+..|..++..+   +||||+++++++...+..++||||+++
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            69999999999998  789999999875321   1233455677776655   699999999999999999999999999


Q ss_pred             CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCcc
Q 026214          142 GNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTS  221 (241)
Q Consensus       142 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~  221 (241)
                      |+|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.++|+|||++.........
T Consensus        81 g~L~~~l~~~-----~~~~~~~~~~~~~qil~al~~LH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~  152 (330)
T cd05586          81 GELFWHLQKE-----GRFSEDRAKFYIAELVLALEHLH---KYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKT  152 (330)
T ss_pred             ChHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCC
Confidence            9999988553     45899999999999999999999   999999999999999999999999999999764333221


Q ss_pred             ccceeecCCceeeeecC
Q 026214          222 GAKCLKSERTEICCVRE  238 (241)
Q Consensus       222 ~~~~~~~~~~~~~~~~e  238 (241)
                      .   ....++..|++||
T Consensus       153 ~---~~~~gt~~y~aPE  166 (330)
T cd05586         153 T---NTFCGTTEYLAPE  166 (330)
T ss_pred             c---cCccCCccccCHH
Confidence            1   1223455678887

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.95  E-value=1.4e-27  Score=195.67  Aligned_cols=164  Identities=25%  Similarity=0.324  Sum_probs=137.3

Q ss_pred             CCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcch--hhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeC
Q 026214           64 YDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGH--GSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESV  139 (241)
Q Consensus        64 ~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~--~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  139 (241)
                      |...+.||+|+||+||++.+  ++..+|+|.+........  ....+|+.++..++||||+++++++......+++||++
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~   80 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC   80 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence            44568999999999999999  778999999987653332  23456999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCC
Q 026214          140 EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGG  219 (241)
Q Consensus       140 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~  219 (241)
                      .+++|.+++...     ..+++..+..++.|++.||.+||   +.+++|+||||+||+++.++.++|+|||.+..+....
T Consensus        81 ~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~L~~Lh---~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~  152 (260)
T PF00069_consen   81 PGGSLQDYLQKN-----KPLSEEEILKIAYQILEALAYLH---SKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENN  152 (260)
T ss_dssp             TTEBHHHHHHHH-----SSBBHHHHHHHHHHHHHHHHHHH---HTTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTT
T ss_pred             cccccccccccc-----ccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccccc
Confidence            988999999733     45899999999999999999999   9999999999999999999999999999998762221


Q ss_pred             ccccceeecCCceeeeecC
Q 026214          220 TSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~e  238 (241)
                         ........+..|.+||
T Consensus       153 ---~~~~~~~~~~~y~aPE  168 (260)
T PF00069_consen  153 ---ENFNPFVGTPEYMAPE  168 (260)
T ss_dssp             ---SEBSSSSSSGGGSCHH
T ss_pred             ---cccccccccccccccc
Confidence               1222334455677776

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.95  E-value=2.2e-27  Score=196.97  Aligned_cols=175  Identities=18%  Similarity=0.244  Sum_probs=139.5

Q ss_pred             HhcCCCcCCeeecccceEEEEEEE-------CCeEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCc
Q 026214           60 ATNNYDQKNVITEDWGCILYKGFW-------QERLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPI  131 (241)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  131 (241)
                      ..++|...+.||+|+||.||+|.+       ++..||+|.+.... ......+.+|+.+++.++||||+++++++.....
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~   83 (277)
T cd05062           4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP   83 (277)
T ss_pred             cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence            456788899999999999999976       24679999886432 1234568899999999999999999999999999


Q ss_pred             ceEEEeeCCCCCHHHHHhhcCCC-----CCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEE
Q 026214          132 PILAFESVEYGNLRDRILSASQP-----QTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKM  206 (241)
Q Consensus       132 ~~lv~e~~~~gsL~~~l~~~~~~-----~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki  206 (241)
                      .+++|||+++++|.+++......     ....+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.++|
T Consensus        84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~vH~dlkp~Nil~~~~~~~~l  160 (277)
T cd05062          84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKI  160 (277)
T ss_pred             eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCcchheEEEcCCCCEEE
Confidence            99999999999999999653210     1234678889999999999999999   899999999999999999999999


Q ss_pred             ccccCceecCCCCccccceeecCCceeeeecC
Q 026214          207 FDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       207 ~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +|||++..+........ ......+..|++||
T Consensus       161 ~dfg~~~~~~~~~~~~~-~~~~~~~~~y~aPE  191 (277)
T cd05062         161 GDFGMTRDIYETDYYRK-GGKGLLPVRWMSPE  191 (277)
T ss_pred             CCCCCccccCCcceeec-CCCCccCHhhcChh
Confidence            99999986644322111 01122234577887

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.95  E-value=3e-28  Score=208.23  Aligned_cols=153  Identities=19%  Similarity=0.221  Sum_probs=137.9

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCc--chhhHHHHHHHHHhcCCCceeeEeeEEecCCc-ceEEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRD--GHGSCINNIVYAAQMSHDHILKLIGCCLETPI-PILAF  136 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~lv~  136 (241)
                      ++|...+++|+|+||.++.+.+  ++..+++|.+......  ......+|+.+++++.|||||.+.+.|..++. .+++|
T Consensus         4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm   83 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM   83 (426)
T ss_pred             chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence            4677789999999999998888  7789999988765432  33468999999999999999999999999888 99999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      +|++||+|.+.+...   ....+++..+..|+.|++.|+.|||   ++.|+|||||+.||+++.++.++|+|||+|+.+.
T Consensus        84 ~Y~eGg~l~~~i~~~---k~~~f~E~~i~~~~~Q~~~av~ylH---~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~  157 (426)
T KOG0589|consen   84 EYCEGGDLAQLIKEQ---KGVLFPEERILKWFVQILLAVNYLH---ENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILN  157 (426)
T ss_pred             eecCCCCHHHHHHHH---hhccccHHHHHHHHHHHHHHHHHHH---hhhhhcccchhhhhhccccCceeecchhhhhhcC
Confidence            999999999999887   3466899999999999999999999   9999999999999999999999999999999998


Q ss_pred             CCCc
Q 026214          217 EGGT  220 (241)
Q Consensus       217 ~~~~  220 (241)
                      ++.+
T Consensus       158 ~~~~  161 (426)
T KOG0589|consen  158 PEDS  161 (426)
T ss_pred             Cchh
Confidence            8863

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.95  E-value=3.4e-27  Score=193.86  Aligned_cols=170  Identities=19%  Similarity=0.285  Sum_probs=142.2

Q ss_pred             HhcCCCcCCeeecccceEEEEEEE-CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           60 ATNNYDQKNVITEDWGCILYKGFW-QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      ..++|...+.||.|++|.||++.+ ++..+++|.+.... .....+.+|+.+++.++||||+++++++......+++|||
T Consensus         4 ~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   82 (261)
T cd05034           4 PRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEY   82 (261)
T ss_pred             chhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEec
Confidence            446788899999999999999998 66789999987644 3457799999999999999999999999988899999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      +++++|.+++...   ....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++++|||++..+..+
T Consensus        83 ~~~~~L~~~i~~~---~~~~~~~~~~~~~~~~i~~al~~lh---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~  156 (261)
T cd05034          83 MSKGSLLDFLKSG---EGKKLRLPQLVDMAAQIAEGMAYLE---SRNYIHRDLAARNILVGENLVCKIADFGLARLIEDD  156 (261)
T ss_pred             cCCCCHHHHHhcc---ccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcchheEEEcCCCCEEECccccceeccch
Confidence            9999999999664   2345899999999999999999999   999999999999999999999999999999877643


Q ss_pred             CccccceeecCCceeeeecC
Q 026214          219 GTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .....  .....+..|++||
T Consensus       157 ~~~~~--~~~~~~~~y~~PE  174 (261)
T cd05034         157 EYTAR--EGAKFPIKWTAPE  174 (261)
T ss_pred             hhhhh--hccCCCccccCHH
Confidence            21111  1112233567776

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.95  E-value=8.4e-28  Score=200.81  Aligned_cols=148  Identities=19%  Similarity=0.182  Sum_probs=134.0

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      +.|...+.||.|.-|+||.+.+  ++..+|+|++.+..   .....+...|-++|+.++||.++.|++.+..+...+|+|
T Consensus        77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m  156 (459)
T KOG0610|consen   77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM  156 (459)
T ss_pred             HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence            4456678999999999999999  56899999998753   233466788999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceec
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI  215 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~  215 (241)
                      |||+||+|..+.+++   ....+++..+..++..|+.||.|||   -.|||+|||||+||||-++|++.++||.|+...
T Consensus       157 eyCpGGdL~~LrqkQ---p~~~fse~~aRFYaAEvl~ALEYLH---mlGivYRDLKPENILvredGHIMLsDFDLS~~~  229 (459)
T KOG0610|consen  157 EYCPGGDLHSLRQKQ---PGKRFSESAARFYAAEVLLALEYLH---MLGIVYRDLKPENILVREDGHIMLSDFDLSLRC  229 (459)
T ss_pred             ecCCCccHHHHHhhC---CCCccchhhHHHHHHHHHHHHHHHH---hhceeeccCCcceeEEecCCcEEeeeccccccC
Confidence            999999999999887   5677999999999999999999999   999999999999999999999999999998765

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.95  E-value=7.2e-27  Score=195.37  Aligned_cols=149  Identities=19%  Similarity=0.208  Sum_probs=134.0

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeC
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESV  139 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  139 (241)
                      +.|...++||.|+||.||+|.+  ++..+++|.+........+.+.+|+.+++.++||||+++++++..++..+++|||+
T Consensus        12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   91 (292)
T cd06644          12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC   91 (292)
T ss_pred             hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence            5577888999999999999998  68899999988765555677899999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCC
Q 026214          140 EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE  217 (241)
Q Consensus       140 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~  217 (241)
                      ++++|..++...    ...+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++.....
T Consensus        92 ~~~~l~~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~  162 (292)
T cd06644          92 PGGAVDAIMLEL----DRGLTEPQIQVICRQMLEALQYLH---SMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVK  162 (292)
T ss_pred             CCCcHHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHh---cCCeeecCCCcceEEEcCCCCEEEccCccceeccc
Confidence            999998887554    345899999999999999999999   99999999999999999999999999999876533

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.95  E-value=4.3e-27  Score=193.26  Aligned_cols=148  Identities=17%  Similarity=0.305  Sum_probs=130.8

Q ss_pred             CCCcCCeeecccceEEEEEEE-CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCCC
Q 026214           63 NYDQKNVITEDWGCILYKGFW-QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEY  141 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~  141 (241)
                      .|...+.||+|++|.||.+.+ .+..+|+|.+.... .....+.+|+.++.+++||||+++++++...+..+++|||+.+
T Consensus         5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   83 (256)
T cd05113           5 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSN   83 (256)
T ss_pred             HeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCC
Confidence            466678999999999999988 55569999887543 3456789999999999999999999999988899999999999


Q ss_pred             CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          142 GNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       142 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      ++|.+++...    ...+++..++.++.|++.||.|||   +.+++|+||+|+||+++.++.+||+|||.++.+..+
T Consensus        84 ~~l~~~i~~~----~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~  153 (256)
T cd05113          84 GCLLNYLREH----GKRFQPSQLLEMCKDVCEGMAYLE---SKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDD  153 (256)
T ss_pred             CcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEcCCCCEEECCCccceecCCC
Confidence            9999999654    235899999999999999999999   999999999999999999999999999999876543

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.95  E-value=5.1e-27  Score=192.70  Aligned_cols=161  Identities=18%  Similarity=0.248  Sum_probs=132.5

Q ss_pred             eeecccceEEEEEEE----CCeEEEEEEeeccCC--cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCCCC
Q 026214           69 VITEDWGCILYKGFW----QERLISVMRFRESNR--DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYG  142 (241)
Q Consensus        69 ~lg~G~~g~Vy~~~~----~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g  142 (241)
                      .||+|+||.||+|.+    ++..+|+|.+.....  ...+.+.+|+.+++.++||||+++++++. .+..+++|||++++
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~   80 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG   80 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence            689999999999975    578899998865432  23467889999999999999999999885 45678999999999


Q ss_pred             CHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCccc
Q 026214          143 NLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSG  222 (241)
Q Consensus       143 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~~  222 (241)
                      +|.+++...     ..+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.++|+|||++..+..+....
T Consensus        81 ~L~~~l~~~-----~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~  152 (257)
T cd05116          81 PLNKFLQKN-----KHVTEKNITELVHQVSMGMKYLE---ETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYY  152 (257)
T ss_pred             cHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCee
Confidence            999999543     35889999999999999999999   9999999999999999999999999999998876554332


Q ss_pred             cceeecCCceeeeecC
Q 026214          223 AKCLKSERTEICCVRE  238 (241)
Q Consensus       223 ~~~~~~~~~~~~~~~e  238 (241)
                      .....+..+..|++||
T Consensus       153 ~~~~~~~~~~~y~aPE  168 (257)
T cd05116         153 KAKTHGKWPVKWYAPE  168 (257)
T ss_pred             eecCCCCCCccccCHh
Confidence            2222233345677887

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.95  E-value=1.9e-27  Score=196.14  Aligned_cols=166  Identities=19%  Similarity=0.221  Sum_probs=140.3

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeC
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESV  139 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  139 (241)
                      ++|...+.||+|+||.||+|.+  ++..||+|.++.........+.+|+.++..++||||+++++++...+..++++||+
T Consensus         9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~   88 (267)
T cd06645           9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC   88 (267)
T ss_pred             HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence            4566778999999999999998  78899999987665444566788999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCC
Q 026214          140 EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGG  219 (241)
Q Consensus       140 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~  219 (241)
                      ++++|.+++...     +.+++..+..++.|++.||.|||   ..+++|+||+|+||+++.++.++|+|||++.......
T Consensus        89 ~~~~L~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~  160 (267)
T cd06645          89 GGGSLQDIYHVT-----GPLSESQIAYVSRETLQGLYYLH---SKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATI  160 (267)
T ss_pred             CCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECcceeeeEccCcc
Confidence            999999998554     45899999999999999999999   9999999999999999999999999999998764322


Q ss_pred             ccccceeecCCceeeeecC
Q 026214          220 TSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~e  238 (241)
                      ...   ....++..|+|||
T Consensus       161 ~~~---~~~~~~~~y~aPE  176 (267)
T cd06645         161 AKR---KSFIGTPYWMAPE  176 (267)
T ss_pred             ccc---ccccCcccccChh
Confidence            111   1223344677777

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.95  E-value=4.8e-27  Score=197.33  Aligned_cols=166  Identities=19%  Similarity=0.262  Sum_probs=138.4

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      +.|...+.||.|+||.||+|.+  ++..||+|.+.... ......+.+|+.+++.++||||+++++++...+..++++||
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~   85 (301)
T cd07873           6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   85 (301)
T ss_pred             cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence            4577889999999999999998  78899999987543 22345678899999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      ++ ++|.+++...    ...+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.++|+|||++.....+
T Consensus        86 ~~-~~l~~~l~~~----~~~~~~~~~~~~~~qi~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~  157 (301)
T cd07873          86 LD-KDLKQYLDDC----GNSINMHNVKLFLFQLLRGLNYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSIP  157 (301)
T ss_pred             cc-cCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCC
Confidence            97 6999988654    345889999999999999999999   999999999999999999999999999999865443


Q ss_pred             CccccceeecCCceeeeecC
Q 026214          219 GTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .....   ....+..|++||
T Consensus       158 ~~~~~---~~~~~~~y~~PE  174 (301)
T cd07873         158 TKTYS---NEVVTLWYRPPD  174 (301)
T ss_pred             CCccc---ccceeecccCcH
Confidence            22111   112345677777

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.95  E-value=5.3e-27  Score=195.02  Aligned_cols=173  Identities=21%  Similarity=0.244  Sum_probs=139.4

Q ss_pred             CCCcCCeeecccceEEEEEEE--CC-----eEEEEEEeeccCC-cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceE
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QE-----RLISVMRFRESNR-DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPIL  134 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~-----~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  134 (241)
                      .|...+.||+|+||.||+|.+  .+     ..|++|.+..... .....+.+|+.++..++||||+++++++......++
T Consensus         6 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~   85 (283)
T cd05048           6 AVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCM   85 (283)
T ss_pred             HcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEE
Confidence            467788999999999999987  22     5799998865432 234568899999999999999999999999899999


Q ss_pred             EEeeCCCCCHHHHHhhcCCCC-----------CCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCc
Q 026214          135 AFESVEYGNLRDRILSASQPQ-----------TEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENV  203 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~~~~~-----------~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~  203 (241)
                      +|||+++++|.+++.......           ...+++..+..++.|++.||.|||   +.+++|+||||+||++++++.
T Consensus        86 ~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nil~~~~~~  162 (283)
T cd05048          86 LFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLS---SHHFVHRDLAARNCLVGEGLT  162 (283)
T ss_pred             EEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccccceEEEcCCCc
Confidence            999999999999997642111           156888999999999999999999   999999999999999999999


Q ss_pred             EEEccccCceecCCCCccccceeecCCceeeeecCC
Q 026214          204 AKMFDFSLSISIPEGGTSGAKCLKSERTEICCVREN  239 (241)
Q Consensus       204 ~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e~  239 (241)
                      ++|+|||++........... ......+..|+|||.
T Consensus       163 ~~L~dfg~~~~~~~~~~~~~-~~~~~~~~~y~aPE~  197 (283)
T cd05048         163 VKISDFGLSRDIYSADYYRV-QSKSLLPVRWMPPEA  197 (283)
T ss_pred             EEECCCcceeeccccccccc-cCCCcccccccCHHH
Confidence            99999999987644322111 111223456888883

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.95  E-value=5.6e-27  Score=198.03  Aligned_cols=166  Identities=18%  Similarity=0.129  Sum_probs=131.3

Q ss_pred             CCeeecccceEEEEEEE----CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEec--CCcceEEEeeCC
Q 026214           67 KNVITEDWGCILYKGFW----QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLE--TPIPILAFESVE  140 (241)
Q Consensus        67 ~~~lg~G~~g~Vy~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~~~  140 (241)
                      ..+||+|+||.||+|..    ++..||+|.+....  ....+.+|+.+++.++||||+++++++..  +...++++||+.
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~   83 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE   83 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence            46899999999999996    45789999886543  33467899999999999999999998854  457899999997


Q ss_pred             CCCHHHHHhhcC----CCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeE----cCCCcEEEccccCc
Q 026214          141 YGNLRDRILSAS----QPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILF----NEENVAKMFDFSLS  212 (241)
Q Consensus       141 ~gsL~~~l~~~~----~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill----~~~~~~ki~DfG~a  212 (241)
                       ++|.+++....    ......+++..+..++.|++.||.|||   +.+++||||||+|||+    +.++.+||+|||++
T Consensus        84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a  159 (317)
T cd07867          84 -HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFA  159 (317)
T ss_pred             -CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence             58888875321    112345889999999999999999999   9999999999999999    55678999999999


Q ss_pred             eecCCCCccccceeecCCceeeeecC
Q 026214          213 ISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +.+..+............+..|+|||
T Consensus       160 ~~~~~~~~~~~~~~~~~~t~~y~aPE  185 (317)
T cd07867         160 RLFNSPLKPLADLDPVVVTFWYRAPE  185 (317)
T ss_pred             eccCCCcccccccCcceecccccCcH
Confidence            98765433222222233455688888

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.95  E-value=4.3e-27  Score=196.45  Aligned_cols=173  Identities=21%  Similarity=0.260  Sum_probs=141.5

Q ss_pred             cCCCcCCeeecccceEEEEEEE-------CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW-------QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPIL  134 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  134 (241)
                      ++|...+.||+|+||.||++..       ++..+|+|.+..........+.+|+.++.+++||||+++++++...+..++
T Consensus         5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (288)
T cd05093           5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM   84 (288)
T ss_pred             HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence            5678889999999999999974       345689998876554455679999999999999999999999999999999


Q ss_pred             EEeeCCCCCHHHHHhhcCC--------CCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEE
Q 026214          135 AFESVEYGNLRDRILSASQ--------PQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKM  206 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~~~--------~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki  206 (241)
                      ++||+++++|.+++.....        .....+++..+..++.|++.||.|||   +.+++||||||+||+++.++.++|
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH---~~~i~H~dlkp~Nili~~~~~~kl  161 (288)
T cd05093          85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKI  161 (288)
T ss_pred             EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccCcceEEEccCCcEEe
Confidence            9999999999999975421        12345899999999999999999999   999999999999999999999999


Q ss_pred             ccccCceecCCCCccccceeecCCceeeeecC
Q 026214          207 FDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       207 ~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +|||++..+....... .......+..|++||
T Consensus       162 ~dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE  192 (288)
T cd05093         162 GDFGMSRDVYSTDYYR-VGGHTMLPIRWMPPE  192 (288)
T ss_pred             ccCCccccccCCceee-cCCCCCccccccCHH
Confidence            9999998765432211 111122234577887

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.95  E-value=4.5e-27  Score=193.25  Aligned_cols=167  Identities=17%  Similarity=0.251  Sum_probs=138.5

Q ss_pred             cCCCcCCeeecccceEEEEEEE-CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCC
Q 026214           62 NNYDQKNVITEDWGCILYKGFW-QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVE  140 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~  140 (241)
                      +.|...+.||+|++|.||+|.+ .+..+|+|.+..... ....+.+|+.++++++|||++++++++. ....+++|||++
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~   83 (260)
T cd05070           6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMS   83 (260)
T ss_pred             HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecC
Confidence            4577788999999999999988 667899999876542 4467899999999999999999999875 456899999999


Q ss_pred             CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCc
Q 026214          141 YGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGT  220 (241)
Q Consensus       141 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~  220 (241)
                      +++|.+++...   ....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++..+.....
T Consensus        84 ~~~L~~~~~~~---~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~  157 (260)
T cd05070          84 KGSLLDFLKDG---EGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEY  157 (260)
T ss_pred             CCcHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEEeCCceEEeCCceeeeeccCccc
Confidence            99999999764   2345899999999999999999999   99999999999999999999999999999987754432


Q ss_pred             cccceeecCCceeeeecC
Q 026214          221 SGAKCLKSERTEICCVRE  238 (241)
Q Consensus       221 ~~~~~~~~~~~~~~~~~e  238 (241)
                      ...  .....+..|++||
T Consensus       158 ~~~--~~~~~~~~y~aPE  173 (260)
T cd05070         158 TAR--QGAKFPIKWTAPE  173 (260)
T ss_pred             ccc--cCCCCCccccChH
Confidence            211  1112234578887

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.95  E-value=5.8e-27  Score=193.10  Aligned_cols=168  Identities=17%  Similarity=0.231  Sum_probs=137.9

Q ss_pred             hcCCCcCCeeecccceEEEEEEE-CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeC
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW-QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESV  139 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  139 (241)
                      .+.|...++||+|++|.||+|.+ ....||+|.+.... .....+.+|+.++..++||||+++++++. ....+++|||+
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~   82 (262)
T cd05071           5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYM   82 (262)
T ss_pred             hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcC
Confidence            34588899999999999999988 55679999987643 24467899999999999999999998874 45689999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCC
Q 026214          140 EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGG  219 (241)
Q Consensus       140 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~  219 (241)
                      ++++|.+++...   ....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||.+..+....
T Consensus        83 ~~~~L~~~~~~~---~~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~  156 (262)
T cd05071          83 SKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE  156 (262)
T ss_pred             CCCcHHHHHhhc---cccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccCcccEEEcCCCcEEeccCCceeeccccc
Confidence            999999999654   2345789999999999999999999   9999999999999999999999999999998775443


Q ss_pred             ccccceeecCCceeeeecC
Q 026214          220 TSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~e  238 (241)
                      ....  .....+..|++||
T Consensus       157 ~~~~--~~~~~~~~y~~PE  173 (262)
T cd05071         157 YTAR--QGAKFPIKWTAPE  173 (262)
T ss_pred             cccc--cCCcccceecCHh
Confidence            2211  1122334577887

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.95  E-value=4e-27  Score=192.98  Aligned_cols=165  Identities=18%  Similarity=0.307  Sum_probs=138.9

Q ss_pred             CeeecccceEEEEEEE-C----CeEEEEEEeeccCC-cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCCC
Q 026214           68 NVITEDWGCILYKGFW-Q----ERLISVMRFRESNR-DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEY  141 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~-~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~  141 (241)
                      ++||+|++|.||+|.+ +    ...||+|.+..... ...+.+.+|+.++++++||||+++++++.. ...++++||+++
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~   79 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL   79 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence            4689999999999987 2    23689999887654 455778999999999999999999999988 889999999999


Q ss_pred             CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCcc
Q 026214          142 GNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTS  221 (241)
Q Consensus       142 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~  221 (241)
                      ++|.+++....   ...+++..+..++.|++.||.|||   ..+++|+||+|+||+++.++.+||+|||++..+..+...
T Consensus        80 ~~L~~~l~~~~---~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~  153 (257)
T cd05040          80 GSLLDRLRKDA---LGHFLISTLCDYAVQIANGMRYLE---SKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDH  153 (257)
T ss_pred             CcHHHHHHhcc---cccCcHHHHHHHHHHHHHHHHHHH---hCCccccccCcccEEEecCCEEEeccccccccccccccc
Confidence            99999997651   256899999999999999999999   999999999999999999999999999999988664433


Q ss_pred             ccceeecCCceeeeecCC
Q 026214          222 GAKCLKSERTEICCVREN  239 (241)
Q Consensus       222 ~~~~~~~~~~~~~~~~e~  239 (241)
                      .........+..|++||-
T Consensus       154 ~~~~~~~~~~~~y~~pE~  171 (257)
T cd05040         154 YVMEEHLKVPFAWCAPES  171 (257)
T ss_pred             eecccCCCCCceecCHHH
Confidence            222223444566888883

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.95  E-value=9e-27  Score=191.69  Aligned_cols=170  Identities=19%  Similarity=0.288  Sum_probs=142.0

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      ++|...+.||+|++|.||+|.+  ++..|++|.++...   ......+.+|+.++++++|+|++++++++...+..+++|
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~   81 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL   81 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            5788899999999999999999  78999999886422   223467899999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||+++++|.+++..... ....+++..+..++.+++.||.|||   +.+++|+||+|+||+++.++.++|+|||++..+.
T Consensus        82 e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~  157 (267)
T cd08224          82 ELADAGDLSRMIKHFKK-QKRLIPERTIWKYFVQLCSALEHMH---SKRIMHRDIKPANVFITATGVVKLGDLGLGRFFS  157 (267)
T ss_pred             ecCCCCCHHHHHHHhcc-cCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecCCcChhhEEECCCCcEEEeccceeeecc
Confidence            99999999999865421 2455889999999999999999999   9999999999999999999999999999998765


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .......   ....+..|.+||
T Consensus       158 ~~~~~~~---~~~~~~~y~apE  176 (267)
T cd08224         158 SKTTAAH---SLVGTPYYMSPE  176 (267)
T ss_pred             CCCcccc---eecCCccccCHH
Confidence            4322111   112344567777

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.95  E-value=4.9e-27  Score=193.94  Aligned_cols=170  Identities=18%  Similarity=0.206  Sum_probs=139.4

Q ss_pred             CCCcCCeeecccceEEEEEEE--CC---eEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QE---RLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      .|...+.||+|+||.||+|.+  ++   ..||+|.+.... ......|..|+.+++.++||||+++.+++..+...+++|
T Consensus         5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~   84 (269)
T cd05065           5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT   84 (269)
T ss_pred             HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence            467788999999999999998  33   369999987542 233567999999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||+++++|.+++...    ...+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++++|||++..+.
T Consensus        85 e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~~l~~al~~lH---~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~  157 (269)
T cd05065          85 EFMENGALDSFLRQN----DGQFTVIQLVGMLRGIAAGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLE  157 (269)
T ss_pred             ecCCCCcHHHHHhhC----CCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccChheEEEcCCCcEEECCCccccccc
Confidence            999999999999654    345889999999999999999999   9999999999999999999999999999998765


Q ss_pred             CCCcccc--ceeecCCceeeeecCC
Q 026214          217 EGGTSGA--KCLKSERTEICCVREN  239 (241)
Q Consensus       217 ~~~~~~~--~~~~~~~~~~~~~~e~  239 (241)
                      .......  ....+..+..|++||-
T Consensus       158 ~~~~~~~~~~~~~~~~~~~y~~PE~  182 (269)
T cd05065         158 DDTSDPTYTSSLGGKIPIRWTAPEA  182 (269)
T ss_pred             cCccccccccccCCCcceeecCHhH
Confidence            4332211  1122223346778873

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.95  E-value=3.3e-27  Score=195.08  Aligned_cols=170  Identities=18%  Similarity=0.212  Sum_probs=140.1

Q ss_pred             HHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhc-CCCceeeEeeEEecC------
Q 026214           59 LATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQM-SHDHILKLIGCCLET------  129 (241)
Q Consensus        59 ~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~------  129 (241)
                      .+.+.|...+.||.|+||.||+|.+  ++..||+|.+.... .....+.+|+.++.++ +||||+++.+++...      
T Consensus         3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~   81 (272)
T cd06637           3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD   81 (272)
T ss_pred             ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence            3566788889999999999999998  78899999987543 3446788999999999 799999999998753      


Q ss_pred             CcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccc
Q 026214          130 PIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDF  209 (241)
Q Consensus       130 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~Df  209 (241)
                      ...+++|||+++++|.+++...   ....+++..+..++.|++.||.|||   +.+++|+||+|+||++++++.++|+||
T Consensus        82 ~~~~iv~e~~~~~~L~~~l~~~---~~~~l~~~~~~~~~~qi~~~l~~LH---~~~ivh~dl~~~nili~~~~~~~l~Df  155 (272)
T cd06637          82 DQLWLVMEFCGAGSVTDLIKNT---KGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDF  155 (272)
T ss_pred             cEEEEEEEcCCCCcHHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHEEECCCCCEEEccC
Confidence            3578999999999999999764   2345889999999999999999999   899999999999999999999999999


Q ss_pred             cCceecCCCCccccceeecCCceeeeecC
Q 026214          210 SLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       210 G~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |++..+.......   ....++..|.+||
T Consensus       156 g~~~~~~~~~~~~---~~~~g~~~y~aPE  181 (272)
T cd06637         156 GVSAQLDRTVGRR---NTFIGTPYWMAPE  181 (272)
T ss_pred             CCceecccccccC---CcccccccccCHh
Confidence            9998765432211   1222444577777

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.95  E-value=5.8e-27  Score=191.70  Aligned_cols=167  Identities=17%  Similarity=0.239  Sum_probs=141.5

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      +|...+.||+|++|.||++.+  ++..|++|.+....  ......+.+|+.+++.++||||+++++++...+..++++||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY   80 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence            366778999999999999998  78999999987532  23456788999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      +++++|.+++...   ....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++..+...
T Consensus        81 ~~~~~L~~~l~~~---~~~~~~~~~~~~i~~~l~~al~~lH---~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~  154 (256)
T cd08529          81 AENGDLHKLLKMQ---RGRPLPEDQVWRFFIQILLGLAHLH---SKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDN  154 (256)
T ss_pred             CCCCcHHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEeCCCCEEEcccccceeccCc
Confidence            9999999999764   2356899999999999999999999   999999999999999999999999999999887654


Q ss_pred             CccccceeecCCceeeeecC
Q 026214          219 GTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .....   ...++..|.+||
T Consensus       155 ~~~~~---~~~~~~~y~aPE  171 (256)
T cd08529         155 TNFAN---TIVGTPYYLSPE  171 (256)
T ss_pred             cchhh---ccccCccccCHH
Confidence            33221   112344577777

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.95  E-value=6.6e-27  Score=192.77  Aligned_cols=170  Identities=21%  Similarity=0.220  Sum_probs=137.1

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC-----cchhhHHHHHHHHHhcCCCceeeEeeEEecC--Ccc
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR-----DGHGSCINNIVYAAQMSHDHILKLIGCCLET--PIP  132 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~  132 (241)
                      .+|...+.||+|+||.||.+.+  ++..|++|.+.....     .....+.+|+.++..++||||+++++++.+.  ...
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL   81 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence            4688889999999999999998  789999998764321     1235678899999999999999999988764  467


Q ss_pred             eEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCc
Q 026214          133 ILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS  212 (241)
Q Consensus       133 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a  212 (241)
                      +++|||+++++|.+++...     ..+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++
T Consensus        82 ~~v~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~  153 (265)
T cd06652          82 SIFMEHMPGGSIKDQLKSY-----GALTENVTRKYTRQILEGVSYLH---SNMIVHRDIKGANILRDSVGNVKLGDFGAS  153 (265)
T ss_pred             EEEEEecCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEecCCCCEEECcCccc
Confidence            8999999999999998654     34788889999999999999999   999999999999999999999999999999


Q ss_pred             eecCCCCccccceeecCCceeeeecCC
Q 026214          213 ISIPEGGTSGAKCLKSERTEICCVREN  239 (241)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~e~  239 (241)
                      ..................+..|++||-
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~y~aPE~  180 (265)
T cd06652         154 KRLQTICLSGTGMKSVTGTPYWMSPEV  180 (265)
T ss_pred             cccccccccccccccCCCCccccChhh
Confidence            876432211111111234456788873

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.95  E-value=3.2e-27  Score=203.32  Aligned_cols=164  Identities=18%  Similarity=0.194  Sum_probs=134.6

Q ss_pred             HhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeecc--CCcchhhHHHHHHHHHhcCCCceeeEeeEEecCC-----
Q 026214           60 ATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRES--NRDGHGSCINNIVYAAQMSHDHILKLIGCCLETP-----  130 (241)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----  130 (241)
                      ..++|...+.||+|+||.||++.+  ++..||+|.+...  .......+.+|+.++..++||||+++++++....     
T Consensus        19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   98 (359)
T cd07876          19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF   98 (359)
T ss_pred             hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence            457799999999999999999998  7899999998653  2233567889999999999999999999986543     


Q ss_pred             -cceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccc
Q 026214          131 -IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDF  209 (241)
Q Consensus       131 -~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~Df  209 (241)
                       ..+++|||+. ++|.+.+..       .+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+||
T Consensus        99 ~~~~lv~e~~~-~~l~~~~~~-------~~~~~~~~~~~~qi~~~L~~LH---~~~ivHrDlkp~NIl~~~~~~~kl~Df  167 (359)
T cd07876          99 QDVYLVMELMD-ANLCQVIHM-------ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDF  167 (359)
T ss_pred             ceeEEEEeCCC-cCHHHHHhc-------cCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEecC
Confidence             4699999997 577777732       3788889999999999999999   999999999999999999999999999


Q ss_pred             cCceecCCCCccccceeecCCceeeeecC
Q 026214          210 SLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       210 G~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |+++.........    ...++..|++||
T Consensus       168 g~a~~~~~~~~~~----~~~~t~~y~aPE  192 (359)
T cd07876         168 GLARTACTNFMMT----PYVVTRYYRAPE  192 (359)
T ss_pred             CCccccccCccCC----CCcccCCCCCch
Confidence            9998654332211    123345678887

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.95  E-value=7e-27  Score=194.39  Aligned_cols=168  Identities=15%  Similarity=0.263  Sum_probs=133.5

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCe----EEEEEEeeccCC-cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEE
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QER----LISVMRFRESNR-DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA  135 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  135 (241)
                      .|...+.||.|+||.||+|.+  ++.    .+++|.+..... ....++..|+..+..++||||+++++++.. ...+++
T Consensus         8 ~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~i   86 (279)
T cd05111           8 ELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQLV   86 (279)
T ss_pred             hceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEEE
Confidence            466778999999999999998  454    477777654321 223567778888999999999999998864 557889


Q ss_pred             EeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceec
Q 026214          136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI  215 (241)
Q Consensus       136 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~  215 (241)
                      +||+++|+|.+++...    ...+++..+..++.|++.||.|||   +.+++|+||||+|||++.++.+||+|||+++.+
T Consensus        87 ~e~~~~gsL~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~  159 (279)
T cd05111          87 TQLSPLGSLLDHVRQH----RDSLDPQRLLNWCVQIAKGMYYLE---EHRMVHRNLAARNILLKSDSIVQIADFGVADLL  159 (279)
T ss_pred             EEeCCCCcHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEEcCCccceec
Confidence            9999999999999764    346899999999999999999999   999999999999999999999999999999877


Q ss_pred             CCCCccccceeecCCceeeeecCC
Q 026214          216 PEGGTSGAKCLKSERTEICCVREN  239 (241)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~e~  239 (241)
                      .+...... ......+..|++||.
T Consensus       160 ~~~~~~~~-~~~~~~~~~y~~pE~  182 (279)
T cd05111         160 YPDDKKYF-YSEHKTPIKWMALES  182 (279)
T ss_pred             cCCCcccc-cCCCCCcccccCHHH
Confidence            54432211 112223345777773

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.95  E-value=4.2e-27  Score=196.71  Aligned_cols=163  Identities=17%  Similarity=0.185  Sum_probs=139.9

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      ++|...+.||.|++|.||++.+  ++..+|+|.+....   ......+.+|+.++++++||||+++++++...+..+++|
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   80 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM   80 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence            3577889999999999999998  78999999987542   223466889999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||+++++|.+++...     ..+++..+..++.|++.||.|||   ..+++|+||+|+||+++.++.++|+|||++....
T Consensus        81 e~~~~~~L~~~~~~~-----~~l~~~~~~~~~~qil~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~  152 (290)
T cd05580          81 EYVPGGELFSHLRKS-----GRFPEPVARFYAAQVVLALEYLH---SLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVK  152 (290)
T ss_pred             ecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEeeCCCccccC
Confidence            999999999999654     45889999999999999999999   9999999999999999999999999999998775


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ....      ....+..|++||
T Consensus       153 ~~~~------~~~~~~~y~aPE  168 (290)
T cd05580         153 GRTY------TLCGTPEYLAPE  168 (290)
T ss_pred             CCCC------CCCCCccccChh
Confidence            5421      112344567777

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.95  E-value=4e-27  Score=208.33  Aligned_cols=163  Identities=16%  Similarity=0.154  Sum_probs=136.5

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      ...|.....||+|+||.||++.+  ++..||+|...      ...+.+|+.++++++||||+++++++...+..+++||+
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~  241 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK  241 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            44688889999999999999999  67889999532      23467899999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      +. ++|.+++...    ...+++..++.++.|++.||.|||   +.+|+||||||+|||++.++.++|+|||+++.+...
T Consensus       242 ~~-~~L~~~l~~~----~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~  313 (461)
T PHA03211        242 YR-SDLYTYLGAR----LRPLGLAQVTAVARQLLSAIDYIH---GEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGS  313 (461)
T ss_pred             cC-CCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCEEECcCCHHHEEECCCCCEEEcccCCceecccc
Confidence            96 6999888654    346899999999999999999999   999999999999999999999999999999877543


Q ss_pred             CccccceeecCCceeeeecC
Q 026214          219 GTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ..... .....++..|++||
T Consensus       314 ~~~~~-~~~~~GT~~Y~APE  332 (461)
T PHA03211        314 WSTPF-HYGIAGTVDTNAPE  332 (461)
T ss_pred             ccccc-ccccCCCcCCcCHH
Confidence            22211 11223455678887

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.95  E-value=2e-27  Score=203.98  Aligned_cols=161  Identities=20%  Similarity=0.222  Sum_probs=136.2

Q ss_pred             CCeeecccceEEEEEEE--CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCCCC
Q 026214           67 KNVITEDWGCILYKGFW--QERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYG  142 (241)
Q Consensus        67 ~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g  142 (241)
                      ++.||+|-||+||-|++  +|+.||||.+.+..  .....++.+|+.+|+.++||.||.+.--|+..+..+.|||-+. |
T Consensus       569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~-G  647 (888)
T KOG4236|consen  569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLH-G  647 (888)
T ss_pred             HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhc-c
Confidence            67999999999999999  99999999987642  2345778999999999999999999999999999999999997 5


Q ss_pred             CHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcC---CCcEEEccccCceecCCCC
Q 026214          143 NLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNE---ENVAKMFDFSLSISIPEGG  219 (241)
Q Consensus       143 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~---~~~~ki~DfG~a~~~~~~~  219 (241)
                      +..+.+...   ..+.+++.....++.||+.||.|||   -++|+|+||||+|||+..   .-.+||||||+|+.+++.+
T Consensus       648 DMLEMILSs---EkgRL~er~TkFlvtQIL~ALr~LH---~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks  721 (888)
T KOG4236|consen  648 DMLEMILSS---EKGRLPERITKFLVTQILVALRYLH---FKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS  721 (888)
T ss_pred             hHHHHHHHh---hcccchHHHHHHHHHHHHHHHHHhh---hcceeeccCCchheeeccCCCCCceeeccccceeecchhh
Confidence            666665544   3567999999999999999999999   999999999999999954   3579999999999998764


Q ss_pred             ccccceeecCCceeeeecC
Q 026214          220 TSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~e  238 (241)
                      -..  .+.  +++.|.|||
T Consensus       722 FRr--sVV--GTPAYLaPE  736 (888)
T KOG4236|consen  722 FRR--SVV--GTPAYLAPE  736 (888)
T ss_pred             hhh--hhc--CCccccCHH
Confidence            333  233  345678887

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.95  E-value=6e-27  Score=197.55  Aligned_cols=164  Identities=16%  Similarity=0.202  Sum_probs=137.6

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC-cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR-DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      ++|...+.||+|+||.||++.+  ++..+|+|.+..... ....++.+|+.++..++||||+++++++..++..++++||
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey   80 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH   80 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence            3588889999999999999998  788899998865422 2345688999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCC-CCeEEccCCCCCeeEcCCCcEEEccccCceecCC
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFP-RPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE  217 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~-~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~  217 (241)
                      +++++|.+++...     ..+++..+..++.|++.||.|||   + .+++|+||+|+|||++.++.++|+|||++..+..
T Consensus        81 ~~~~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~  152 (308)
T cd06615          81 MDGGSLDQVLKKA-----GRIPENILGKISIAVLRGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID  152 (308)
T ss_pred             cCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hhCCEEECCCChHHEEEecCCcEEEccCCCcccccc
Confidence            9999999999654     45889999999999999999999   6 5899999999999999999999999999876643


Q ss_pred             CCccccceeecCCceeeeecC
Q 026214          218 GGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ....     ....+..|.+||
T Consensus       153 ~~~~-----~~~~~~~~~aPE  168 (308)
T cd06615         153 SMAN-----SFVGTRSYMSPE  168 (308)
T ss_pred             cccc-----cCCCCcCccChh
Confidence            3211     112334566676

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.95  E-value=4e-27  Score=195.50  Aligned_cols=141  Identities=21%  Similarity=0.263  Sum_probs=120.9

Q ss_pred             eeecccceEEEEEEE--C------------------------CeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeE
Q 026214           69 VITEDWGCILYKGFW--Q------------------------ERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKL  122 (241)
Q Consensus        69 ~lg~G~~g~Vy~~~~--~------------------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l  122 (241)
                      +||+|+||.||+|..  +                        ...|++|.+..........+.+|+.+++.++||||+++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            689999999999974  1                        14588888866543345678889999999999999999


Q ss_pred             eeEEecCCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCC
Q 026214          123 IGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEEN  202 (241)
Q Consensus       123 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~  202 (241)
                      ++++......++||||+++++|..++...    ...+++..+..++.|++.||.|||   +.+++||||||+|||++..+
T Consensus        82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp~Nill~~~~  154 (274)
T cd05076          82 HGVCVRGSENIMVEEFVEHGPLDVCLRKE----KGRVPVAWKITVAQQLASALSYLE---DKNLVHGNVCAKNILLARLG  154 (274)
T ss_pred             EEEEEeCCceEEEEecCCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---cCCccCCCCCcccEEEeccC
Confidence            99999999999999999999999998654    345888999999999999999999   99999999999999997643


Q ss_pred             -------cEEEccccCceecC
Q 026214          203 -------VAKMFDFSLSISIP  216 (241)
Q Consensus       203 -------~~ki~DfG~a~~~~  216 (241)
                             .++++|||++....
T Consensus       155 ~~~~~~~~~kl~d~g~~~~~~  175 (274)
T cd05076         155 LAEGTSPFIKLSDPGVSFTAL  175 (274)
T ss_pred             cccCccceeeecCCccccccc
Confidence                   48999999986553

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.95  E-value=3.8e-27  Score=196.19  Aligned_cols=179  Identities=16%  Similarity=0.139  Sum_probs=145.2

Q ss_pred             cCHHHHHHHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhc-CCCceeeEeeEEe-
Q 026214           52 FSAQELKLATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQM-SHDHILKLIGCCL-  127 (241)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~-  127 (241)
                      +.++.+..+.++|...+.||+|+||.||++.+  ++..+|+|.+.... .....+.+|+.++..+ +||||+++++++. 
T Consensus         8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   86 (286)
T cd06638           8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYK   86 (286)
T ss_pred             EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence            44566777889999999999999999999998  77899999876532 2345678899999999 7999999999884 


Q ss_pred             ----cCCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCc
Q 026214          128 ----ETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENV  203 (241)
Q Consensus       128 ----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~  203 (241)
                          .++..+++|||+++++|.+++..... ....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.
T Consensus        87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~  162 (286)
T cd06638          87 KDVKNGDQLWLVLELCNGGSVTDLVKGFLK-RGERMEEPIIAYILHEALMGLQHLH---VNKTIHRDVKGNNILLTTEGG  162 (286)
T ss_pred             cccCCCCeEEEEEeecCCCCHHHHHHHhhc-cCccccHHHHHHHHHHHHHHHHHHH---hCCccccCCCHHhEEECCCCC
Confidence                34568999999999999998864311 2345888999999999999999999   999999999999999999999


Q ss_pred             EEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          204 AKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       204 ~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ++|+|||++..+........   ...++..|++||
T Consensus       163 ~kl~dfg~~~~~~~~~~~~~---~~~~~~~y~aPE  194 (286)
T cd06638         163 VKLVDFGVSAQLTSTRLRRN---TSVGTPFWMAPE  194 (286)
T ss_pred             EEEccCCceeecccCCCccc---cccCCCcccChh
Confidence            99999999987754322111   112445677887

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.95  E-value=1.9e-29  Score=203.70  Aligned_cols=163  Identities=18%  Similarity=0.245  Sum_probs=145.5

Q ss_pred             CCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCCC
Q 026214           64 YDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEY  141 (241)
Q Consensus        64 ~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~  141 (241)
                      |+...+||+|+||.||++.+  +|..+|||.++-+.  +.++...|+.++++++.|++|+++|.|.....+|+|||||..
T Consensus        35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s--DLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGA  112 (502)
T KOG0574|consen   35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT--DLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGA  112 (502)
T ss_pred             HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc--hHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCC
Confidence            55567899999999999998  89999999988764  788899999999999999999999999999999999999999


Q ss_pred             CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCcc
Q 026214          142 GNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTS  221 (241)
Q Consensus       142 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~  221 (241)
                      ||..+.+.-.    ..++++..+..++...+.||.|||   ...-+|||||+.|||++.+|.+|++|||+|..+..--..
T Consensus       113 GSiSDI~R~R----~K~L~E~EIs~iL~~TLKGL~YLH---~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAK  185 (502)
T KOG0574|consen  113 GSISDIMRAR----RKPLSEQEISAVLRDTLKGLQYLH---DLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAK  185 (502)
T ss_pred             CcHHHHHHHh----cCCccHHHHHHHHHHHHhHHHHHH---HHHHHHhhcccccEEEcccchhhhhhccccchhhhhHHh
Confidence            9999999765    678999999999999999999999   889999999999999999999999999999987655443


Q ss_pred             ccceeecCCceeeeecC
Q 026214          222 GAKCLKSERTEICCVRE  238 (241)
Q Consensus       222 ~~~~~~~~~~~~~~~~e  238 (241)
                      ..+   --+++.|+|||
T Consensus       186 RNT---VIGTPFWMAPE  199 (502)
T KOG0574|consen  186 RNT---VIGTPFWMAPE  199 (502)
T ss_pred             hCc---cccCcccccHH
Confidence            332   33566778887

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.95  E-value=8.7e-27  Score=193.44  Aligned_cols=169  Identities=20%  Similarity=0.252  Sum_probs=140.0

Q ss_pred             CCCcCCeeecccceEEEEEEE------CCeEEEEEEeeccCCc-chhhHHHHHHHHHhcCCCceeeEeeEEec--CCcce
Q 026214           63 NYDQKNVITEDWGCILYKGFW------QERLISVMRFRESNRD-GHGSCINNIVYAAQMSHDHILKLIGCCLE--TPIPI  133 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~  133 (241)
                      .|...+.||+|+||.||++.+      ++..+|+|.+...... ....+.+|+.+++.+.||||+++++++..  ....+
T Consensus         5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~   84 (284)
T cd05038           5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLR   84 (284)
T ss_pred             hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceE
Confidence            456678999999999999986      3678999998765432 35679999999999999999999999877  55789


Q ss_pred             EEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCce
Q 026214          134 LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSI  213 (241)
Q Consensus       134 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~  213 (241)
                      ++|||+++++|.+++...    ...+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++.
T Consensus        85 lv~e~~~~~~l~~~l~~~----~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~  157 (284)
T cd05038          85 LIMEYLPSGSLRDYLQRH----RDQINLKRLLLFSSQICKGMDYLG---SQRYIHRDLAARNILVESEDLVKISDFGLAK  157 (284)
T ss_pred             EEEecCCCCCHHHHHHhC----ccccCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEccccccc
Confidence            999999999999999665    235899999999999999999999   9999999999999999999999999999999


Q ss_pred             ecCCCCccccceeecCCceeeeecC
Q 026214          214 SIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ....+............+..|++||
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~Pe  182 (284)
T cd05038         158 VLPEDKDYYYVKEPGESPIFWYAPE  182 (284)
T ss_pred             ccccCCcceeccCCCCCcccccCcH
Confidence            8875433322222233344567776

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.95  E-value=1.2e-26  Score=189.98  Aligned_cols=167  Identities=18%  Similarity=0.201  Sum_probs=141.4

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      +|+..+.||.|+||.||.+..  ++..+++|.+....  ......+.+|+.++++++|+||+++++++.+.+..+++|||
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~   80 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY   80 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence            477789999999999999888  78899999886542  33456788999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      +++++|.+++...   ....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.+||+|||++......
T Consensus        81 ~~~~~L~~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~  154 (256)
T cd08221          81 ANGGTLYDKIVRQ---KGQLFEEEMVLWYLFQIVSAVSYIH---KAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSE  154 (256)
T ss_pred             cCCCcHHHHHHhc---cccCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChHhEEEeCCCCEEECcCcceEEcccc
Confidence            9999999999764   2356899999999999999999999   999999999999999999999999999999877554


Q ss_pred             CccccceeecCCceeeeecC
Q 026214          219 GTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ....   .....+..|.+||
T Consensus       155 ~~~~---~~~~~~~~y~ape  171 (256)
T cd08221         155 YSMA---ETVVGTPYYMSPE  171 (256)
T ss_pred             cccc---cccCCCccccCHh
Confidence            4211   1122345677777

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.95  E-value=1.1e-26  Score=193.21  Aligned_cols=159  Identities=17%  Similarity=0.221  Sum_probs=134.2

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeC
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESV  139 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  139 (241)
                      +|...++||+|++|.||+|.+  ++..||+|.+.... ......+.+|+.++.+++||||+++++++..++..++++||+
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   81 (279)
T cd06619           2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM   81 (279)
T ss_pred             cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence            466778999999999999998  88899999987542 223456889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCC
Q 026214          140 EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGG  219 (241)
Q Consensus       140 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~  219 (241)
                      ++++|..+.         .+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.++|+|||++..+....
T Consensus        82 ~~~~l~~~~---------~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~  149 (279)
T cd06619          82 DGGSLDVYR---------KIPEHVLGRIAVAVVKGLTYLW---SLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI  149 (279)
T ss_pred             CCCChHHhh---------cCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCCHHHEEECCCCCEEEeeCCcceeccccc
Confidence            999986542         3678888999999999999999   9999999999999999999999999999998765432


Q ss_pred             ccccceeecCCceeeeecC
Q 026214          220 TSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~e  238 (241)
                      ..     ....+..|++||
T Consensus       150 ~~-----~~~~~~~y~aPE  163 (279)
T cd06619         150 AK-----TYVGTNAYMAPE  163 (279)
T ss_pred             cc-----CCCCChhhcCce
Confidence            11     122344677777

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.95  E-value=8.9e-27  Score=195.15  Aligned_cols=165  Identities=20%  Similarity=0.245  Sum_probs=138.1

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCc-----chhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEE
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRD-----GHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA  135 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  135 (241)
                      +|...+.||.|++|.||+|.+  ++..|++|.+......     ....+..|+.+++.++|+||+++++++.+.+..++|
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV   80 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence            366778999999999999998  7889999998765422     234567899999999999999999999999999999


Q ss_pred             EeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceec
Q 026214          136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI  215 (241)
Q Consensus       136 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~  215 (241)
                      |||+ +++|.+++...    ...+++..+..++.|++.||.|||   ..+++|+||+|+||+++.++.++|+|||++..+
T Consensus        81 ~e~~-~~~L~~~i~~~----~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~  152 (298)
T cd07841          81 FEFM-ETDLEKVIKDK----SIVLTPADIKSYMLMTLRGLEYLH---SNWILHRDLKPNNLLIASDGVLKLADFGLARSF  152 (298)
T ss_pred             Eccc-CCCHHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCChhhEEEcCCCCEEEccceeeeec
Confidence            9999 78999999654    135899999999999999999999   999999999999999999999999999999887


Q ss_pred             CCCCccccceeecCCceeeeecC
Q 026214          216 PEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ........   ....+..|.+||
T Consensus       153 ~~~~~~~~---~~~~~~~y~aPE  172 (298)
T cd07841         153 GSPNRKMT---HQVVTRWYRAPE  172 (298)
T ss_pred             cCCCcccc---ccccceeeeCHH
Confidence            65432211   112234567776

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.95  E-value=1.4e-26  Score=189.96  Aligned_cols=149  Identities=21%  Similarity=0.285  Sum_probs=130.7

Q ss_pred             cCCCcCCeeecccceEEEEEEECCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEe-cCCcceEEEeeCC
Q 026214           62 NNYDQKNVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCL-ETPIPILAFESVE  140 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~lv~e~~~  140 (241)
                      .+|...+.||+|++|.||++...+..|++|.+....  ..+.+.+|+.+++.++|+|++++++++. ..+..++++||++
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~   83 (256)
T cd05082           6 KELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA   83 (256)
T ss_pred             HhCeeeeeecccCCCeEEEEEEcCCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCC
Confidence            457778999999999999999999999999886543  3467899999999999999999999765 4467899999999


Q ss_pred             CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          141 YGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       141 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      +++|.+++...   ....+++..+..++.|++.||.|||   +.+++|+||||+||++++++.+|++|||++......
T Consensus        84 ~~~L~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~  155 (256)
T cd05082          84 KGSLVDYLRSR---GRSVLGGDCLLKFSLDVCEAMEYLE---ANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST  155 (256)
T ss_pred             CCcHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeccccchheEEEcCCCcEEecCCccceecccc
Confidence            99999999764   2345889999999999999999999   999999999999999999999999999999866443

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.95  E-value=8.2e-27  Score=191.71  Aligned_cols=149  Identities=17%  Similarity=0.290  Sum_probs=131.9

Q ss_pred             hcCCCcCCeeecccceEEEEEEE-CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeC
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW-QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESV  139 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  139 (241)
                      .+.|...++||+|+||.||+|.. ++..||+|.+.... .....+.+|+.+++.++||||+++++++. .+..+++|||+
T Consensus         5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~   82 (260)
T cd05067           5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYM   82 (260)
T ss_pred             hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcC
Confidence            45678889999999999999998 77889999987654 34567899999999999999999998864 56789999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCC
Q 026214          140 EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE  217 (241)
Q Consensus       140 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~  217 (241)
                      .+++|.+++...   ....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++.....
T Consensus        83 ~~~~L~~~~~~~---~~~~~~~~~~~~i~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~  154 (260)
T cd05067          83 ENGSLVDFLKTP---EGIKLTINKLIDMAAQIAEGMAFIE---RKNYIHRDLRAANILVSETLCCKIADFGLARLIED  154 (260)
T ss_pred             CCCCHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHHhEEEcCCCCEEEccCcceeecCC
Confidence            999999998664   2346889999999999999999999   99999999999999999999999999999987763

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.95  E-value=7.7e-27  Score=193.63  Aligned_cols=173  Identities=23%  Similarity=0.289  Sum_probs=140.7

Q ss_pred             cCCCcCCeeecccceEEEEEEE-C------CeEEEEEEeeccCCc-chhhHHHHHHHHHhcCCCceeeEeeEEecCCcce
Q 026214           62 NNYDQKNVITEDWGCILYKGFW-Q------ERLISVMRFRESNRD-GHGSCINNIVYAAQMSHDHILKLIGCCLETPIPI  133 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~-~------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  133 (241)
                      .+|...+.||+|+||.||+|.. .      +..||+|.+...... ..+.+.+|+.++..++||||+++++++......+
T Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   84 (280)
T cd05049           5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI   84 (280)
T ss_pred             HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence            4577788999999999999986 2      368999998765433 3467899999999999999999999999999999


Q ss_pred             EEEeeCCCCCHHHHHhhcCC---------CCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcE
Q 026214          134 LAFESVEYGNLRDRILSASQ---------PQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVA  204 (241)
Q Consensus       134 lv~e~~~~gsL~~~l~~~~~---------~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~  204 (241)
                      ++|||+++++|.+++.....         .....+++..+..++.|++.||.|||   ..+++|+||||+||+++.++.+
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~h~dlkp~nili~~~~~~  161 (280)
T cd05049          85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLA---SQHFVHRDLATRNCLVGYDLVV  161 (280)
T ss_pred             EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeeccccccceEEEcCCCeE
Confidence            99999999999999976421         12345788999999999999999999   9999999999999999999999


Q ss_pred             EEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          205 KMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       205 ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +|+|||++..+........ ......+..|+|||
T Consensus       162 kl~d~g~~~~~~~~~~~~~-~~~~~~~~~y~aPE  194 (280)
T cd05049         162 KIGDFGMSRDVYTTDYYRV-GGHTMLPIRWMPPE  194 (280)
T ss_pred             EECCcccceecccCcceec-CCCCcccceecChh
Confidence            9999999987644322110 00111235678888

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.95  E-value=6.5e-27  Score=196.91  Aligned_cols=151  Identities=26%  Similarity=0.366  Sum_probs=128.5

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCe--EEEEEEeeccC-CcchhhHHHHHHHHHhc-CCCceeeEeeEEecCCcceEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QER--LISVMRFRESN-RDGHGSCINNIVYAAQM-SHDHILKLIGCCLETPIPILA  135 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv  135 (241)
                      ++|...+.||+|+||.||+|.+  ++.  .+++|.+.... ......+.+|+.++.++ +||||+++++++..++..+++
T Consensus         7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv   86 (303)
T cd05088           7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   86 (303)
T ss_pred             hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence            4677889999999999999997  443  46777766432 22345688899999999 899999999999999999999


Q ss_pred             EeeCCCCCHHHHHhhcCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcE
Q 026214          136 FESVEYGNLRDRILSASQ-----------PQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVA  204 (241)
Q Consensus       136 ~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~  204 (241)
                      +||+++++|.+++.....           .....+++..++.++.|++.||.|||   +.+++|+||||+|||++.++.+
T Consensus        87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dlkp~Nili~~~~~~  163 (303)
T cd05088          87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVA  163 (303)
T ss_pred             EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHH---hCCccccccchheEEecCCCcE
Confidence            999999999999975421           01235789999999999999999999   9999999999999999999999


Q ss_pred             EEccccCceec
Q 026214          205 KMFDFSLSISI  215 (241)
Q Consensus       205 ki~DfG~a~~~  215 (241)
                      +|+|||++...
T Consensus       164 kl~dfg~~~~~  174 (303)
T cd05088         164 KIADFGLSRGQ  174 (303)
T ss_pred             EeCccccCccc
Confidence            99999998643

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.95  E-value=4.4e-27  Score=201.17  Aligned_cols=163  Identities=15%  Similarity=0.200  Sum_probs=135.1

Q ss_pred             HhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC--cchhhHHHHHHHHHhcCCCceeeEeeEEecC------
Q 026214           60 ATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR--DGHGSCINNIVYAAQMSHDHILKLIGCCLET------  129 (241)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------  129 (241)
                      ..+.|...+.||.|+||.||+|.+  ++..||+|.+.....  .....+.+|+.+++.++||||+++++++...      
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07878          13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF   92 (343)
T ss_pred             hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence            456788899999999999999998  788999999875321  2345678999999999999999999887543      


Q ss_pred             CcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccc
Q 026214          130 PIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDF  209 (241)
Q Consensus       130 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~Df  209 (241)
                      ...+++++++ +++|.+++.      ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+||
T Consensus        93 ~~~~~~~~~~-~~~l~~~~~------~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Df  162 (343)
T cd07878          93 NEVYLVTNLM-GADLNNIVK------CQKLSDEHVQFLIYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDF  162 (343)
T ss_pred             CcEEEEeecC-CCCHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeecccCChhhEEECCCCCEEEcCC
Confidence            3468999988 579988873      235899999999999999999999   999999999999999999999999999


Q ss_pred             cCceecCCCCccccceeecCCceeeeecC
Q 026214          210 SLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       210 G~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |++.........      ..++..|++||
T Consensus       163 g~~~~~~~~~~~------~~~t~~y~aPE  185 (343)
T cd07878         163 GLARQADDEMTG------YVATRWYRAPE  185 (343)
T ss_pred             ccceecCCCcCC------ccccccccCch
Confidence            999876543221      12355678887

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.95  E-value=1.1e-26  Score=193.95  Aligned_cols=168  Identities=17%  Similarity=0.190  Sum_probs=137.7

Q ss_pred             HhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCc-chhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           60 ATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRD-GHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      ++++|...+.||+|+||.||+|..  ++..|++|.+...... ....+.+|+.++..++|+||+++.+++...+..++++
T Consensus         3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~   82 (291)
T cd07870           3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF   82 (291)
T ss_pred             ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence            356788899999999999999988  7889999998754322 2345788999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||+. ++|.+.+...    ...+++..+..++.|++.||.|||   ..+++|+||||+||+++.++.++|+|||+++...
T Consensus        83 e~~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~  154 (291)
T cd07870          83 EYMH-TDLAQYMIQH----PGGLHPYNVRLFMFQLLRGLAYIH---GQHILHRDLKPQNLLISYLGELKLADFGLARAKS  154 (291)
T ss_pred             eccc-CCHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEEcCCCcEEEeccccccccC
Confidence            9996 6888777543    345778888899999999999999   8999999999999999999999999999998654


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .......   ....+..|.+||
T Consensus       155 ~~~~~~~---~~~~~~~y~aPE  173 (291)
T cd07870         155 IPSQTYS---SEVVTLWYRPPD  173 (291)
T ss_pred             CCCCCCC---CccccccccCCc
Confidence            4322211   112345677777

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.95  E-value=5.7e-27  Score=195.87  Aligned_cols=179  Identities=19%  Similarity=0.268  Sum_probs=143.6

Q ss_pred             HHHHhcCCCcCCeeecccceEEEEEEEC-------CeEEEEEEeeccC-CcchhhHHHHHHHHHhc-CCCceeeEeeEEe
Q 026214           57 LKLATNNYDQKNVITEDWGCILYKGFWQ-------ERLISVMRFRESN-RDGHGSCINNIVYAAQM-SHDHILKLIGCCL  127 (241)
Q Consensus        57 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~  127 (241)
                      +....++|...+.||+|+||.||++...       ...+|+|.+.... ......+.+|+.++.++ +||||+++++++.
T Consensus         7 ~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~   86 (293)
T cd05053           7 WELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCT   86 (293)
T ss_pred             cccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEc
Confidence            3445566888899999999999999871       2678999887542 22345688999999999 8999999999999


Q ss_pred             cCCcceEEEeeCCCCCHHHHHhhcCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCe
Q 026214          128 ETPIPILAFESVEYGNLRDRILSASQ-----------PQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHI  196 (241)
Q Consensus       128 ~~~~~~lv~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Ni  196 (241)
                      .++..+++|||+++|+|.+++.....           .....+++..++.++.|++.||.|||   +.+++|+||||+||
T Consensus        87 ~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~Ni  163 (293)
T cd05053          87 QEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLA---SKKCIHRDLAARNV  163 (293)
T ss_pred             CCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HCCccccccceeeE
Confidence            99999999999999999999965310           12456889999999999999999999   99999999999999


Q ss_pred             eEcCCCcEEEccccCceecCCCCccccceeecCCceeeeecCC
Q 026214          197 LFNEENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVREN  239 (241)
Q Consensus       197 ll~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e~  239 (241)
                      +++.++.++++|||+++.+....... ....+..+..|++||-
T Consensus       164 l~~~~~~~kL~Dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~  205 (293)
T cd05053         164 LVTEDHVMKIADFGLARDIHHIDYYR-KTTNGRLPVKWMAPEA  205 (293)
T ss_pred             EEcCCCeEEeCcccccccccccccee-ccCCCCCCccccCHHH
Confidence            99999999999999999776543211 1122233445778873

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.95  E-value=3e-27  Score=205.83  Aligned_cols=161  Identities=19%  Similarity=0.174  Sum_probs=142.5

Q ss_pred             HHHHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcc
Q 026214           57 LKLATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIP  132 (241)
Q Consensus        57 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  132 (241)
                      ...-.+.|.....||+|.|+.|..+++  ++..||||.+.+..  ......+.+|+++|..++|||||+++.+...+..+
T Consensus        51 ~~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~l  130 (596)
T KOG0586|consen   51 DSNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATL  130 (596)
T ss_pred             ccccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeeccee
Confidence            345667899999999999999999999  99999999987753  23345689999999999999999999999999999


Q ss_pred             eEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCc
Q 026214          133 ILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS  212 (241)
Q Consensus       133 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a  212 (241)
                      |+||||..+|.+.+++....     ...+.....++.|++.|++|||   ...|+|||||++||||+.+.++||+|||++
T Consensus       131 ylV~eya~~ge~~~yl~~~g-----r~~e~~ar~~F~q~vsaveYcH---~k~ivHrdLk~eNilL~~~mnikIaDfgfS  202 (596)
T KOG0586|consen  131 YLVMEYASGGELFDYLVKHG-----RMKEKEARAKFRQIVSAVEYCH---SKNIVHRDLKAENILLDENMNIKIADFGFS  202 (596)
T ss_pred             EEEEEeccCchhHHHHHhcc-----cchhhhhhhhhHHHHHHHHHHh---hcceeccccchhhcccccccceeeeccccc
Confidence            99999999999999998763     3566778889999999999999   999999999999999999999999999999


Q ss_pred             eecCCCCccccce
Q 026214          213 ISIPEGGTSGAKC  225 (241)
Q Consensus       213 ~~~~~~~~~~~~~  225 (241)
                      ..+.......+.|
T Consensus       203 ~~~~~~~~lqt~c  215 (596)
T KOG0586|consen  203 TFFDYGLMLQTFC  215 (596)
T ss_pred             eeecccccccccC
Confidence            9998665544444

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.95  E-value=1.2e-26  Score=192.89  Aligned_cols=167  Identities=19%  Similarity=0.239  Sum_probs=138.2

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      +|...+.||+|++|.||+|.+  ++..||+|.+....  ......+.+|+.++..++||||+++++++..++..++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF   80 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence            366778999999999999998  78899999886532  22345688999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      +. ++|.+++....  ....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++.....+
T Consensus        81 ~~-~~l~~~~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~  154 (285)
T cd07861          81 LS-MDLKKYLDSLP--KGQYMDAELVKSYLYQILQGILFCH---SRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIP  154 (285)
T ss_pred             CC-CCHHHHHhcCC--CCCcCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEEcCCCcEEECcccceeecCCC
Confidence            97 68998886542  2356899999999999999999999   999999999999999999999999999999876543


Q ss_pred             CccccceeecCCceeeeecC
Q 026214          219 GTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .....   ....+..|++||
T Consensus       155 ~~~~~---~~~~~~~y~aPE  171 (285)
T cd07861         155 VRVYT---HEVVTLWYRAPE  171 (285)
T ss_pred             ccccc---CCcccccccChH
Confidence            22111   112345677777

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.95  E-value=8.1e-27  Score=195.79  Aligned_cols=165  Identities=15%  Similarity=0.245  Sum_probs=142.2

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeC
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESV  139 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  139 (241)
                      .+|...+.||.|++|.||++.+  ++..|++|.+..........+.+|+.+++.++|||++++++++...+..++++||+
T Consensus        19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   98 (296)
T cd06655          19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL   98 (296)
T ss_pred             ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence            4578888999999999999997  88999999987665555677899999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCC
Q 026214          140 EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGG  219 (241)
Q Consensus       140 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~  219 (241)
                      ++++|.+++..      ..+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++..+....
T Consensus        99 ~~~~L~~~~~~------~~l~~~~~~~i~~~l~~al~~LH---~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~  169 (296)
T cd06655          99 AGGSLTDVVTE------TCMDEAQIAAVCRECLQALEFLH---ANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQ  169 (296)
T ss_pred             CCCcHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccchhccccc
Confidence            99999998843      34889999999999999999999   9999999999999999999999999999998765543


Q ss_pred             ccccceeecCCceeeeecC
Q 026214          220 TSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~e  238 (241)
                      ....   ....+..|++||
T Consensus       170 ~~~~---~~~~~~~y~aPE  185 (296)
T cd06655         170 SKRS---TMVGTPYWMAPE  185 (296)
T ss_pred             ccCC---CcCCCccccCcc
Confidence            2211   123445677887

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.95  E-value=1.5e-26  Score=190.93  Aligned_cols=171  Identities=20%  Similarity=0.284  Sum_probs=136.1

Q ss_pred             CCcCCeeecccceEEEEEEE--C---CeEEEEEEeeccCC--cchhhHHHHHHHHHhcCCCceeeEeeEEecCCc-----
Q 026214           64 YDQKNVITEDWGCILYKGFW--Q---ERLISVMRFRESNR--DGHGSCINNIVYAAQMSHDHILKLIGCCLETPI-----  131 (241)
Q Consensus        64 ~~~~~~lg~G~~g~Vy~~~~--~---~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-----  131 (241)
                      |...+.||+|+||.||+|..  +   +..||+|.+.....  .....+.+|+..++.++||||+++++++.....     
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   80 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP   80 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence            45678999999999999987  2   36799999875432  234578999999999999999999998876554     


Q ss_pred             -ceEEEeeCCCCCHHHHHhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccc
Q 026214          132 -PILAFESVEYGNLRDRILSASQ-PQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDF  209 (241)
Q Consensus       132 -~~lv~e~~~~gsL~~~l~~~~~-~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~Df  209 (241)
                       .++++||+++++|..++..... .....+++..+..++.|++.||.|||   +.+++|+||||+||++++++.+||+||
T Consensus        81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~df  157 (273)
T cd05035          81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLS---NRNFIHRDLAARNCMLREDMTVCVADF  157 (273)
T ss_pred             ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchheEEECCCCeEEECCc
Confidence             7999999999999999865421 12346899999999999999999999   999999999999999999999999999


Q ss_pred             cCceecCCCCccccceeecCCceeeeecC
Q 026214          210 SLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       210 G~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |+++.+.......... ....+..|++||
T Consensus       158 g~~~~~~~~~~~~~~~-~~~~~~~~~~pe  185 (273)
T cd05035         158 GLSKKIYSGDYYRQGR-IAKMPVKWIAIE  185 (273)
T ss_pred             cceeeccccccccccc-cccCCccccCHh
Confidence            9999876544322111 122233466666

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.95  E-value=1.4e-26  Score=193.63  Aligned_cols=174  Identities=18%  Similarity=0.206  Sum_probs=140.7

Q ss_pred             hcCCCcCCeeecccceEEEEEEEC------------------CeEEEEEEeeccCC-cchhhHHHHHHHHHhcCCCceee
Q 026214           61 TNNYDQKNVITEDWGCILYKGFWQ------------------ERLISVMRFRESNR-DGHGSCINNIVYAAQMSHDHILK  121 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~~------------------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~  121 (241)
                      ...|...+.||+|+||.||++.+.                  +..||+|.+..... ...+.+.+|+.++..++||||++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   83 (296)
T cd05051           4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR   83 (296)
T ss_pred             hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence            356888899999999999999872                  14589998876532 23567889999999999999999


Q ss_pred             EeeEEecCCcceEEEeeCCCCCHHHHHhhcCCC------CCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCC
Q 026214          122 LIGCCLETPIPILAFESVEYGNLRDRILSASQP------QTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH  195 (241)
Q Consensus       122 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~N  195 (241)
                      +++++..++..++++|++++++|.+++......      ....+++..+..++.|++.||.|||   +.+++|+||||+|
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH---~~~i~H~dlkp~N  160 (296)
T cd05051          84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLE---SLNFVHRDLATRN  160 (296)
T ss_pred             EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHH---HcCccccccchhc
Confidence            999999999999999999999999999765311      1236899999999999999999999   9999999999999


Q ss_pred             eeEcCCCcEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          196 ILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       196 ill~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |+++.++.++|+|||+++.+........ ......+..|++||
T Consensus       161 ili~~~~~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~~y~aPE  202 (296)
T cd05051         161 CLVGKNYTIKIADFGMSRNLYSSDYYRV-QGRAPLPIRWMAWE  202 (296)
T ss_pred             eeecCCCceEEccccceeecccCcceee-cCcCCCCceecCHH
Confidence            9999999999999999987654332111 11122234678887

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.95  E-value=1.1e-26  Score=195.42  Aligned_cols=175  Identities=17%  Similarity=0.258  Sum_probs=142.0

Q ss_pred             HhcCCCcCCeeecccceEEEEEEE---------CCeEEEEEEeeccC-CcchhhHHHHHHHHHhc-CCCceeeEeeEEec
Q 026214           60 ATNNYDQKNVITEDWGCILYKGFW---------QERLISVMRFRESN-RDGHGSCINNIVYAAQM-SHDHILKLIGCCLE  128 (241)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~---------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~  128 (241)
                      ...+|.....||+|+||.||++.+         ++..||+|.+.... ......+.+|+.++..+ +||||+++++++..
T Consensus        13 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~   92 (304)
T cd05101          13 SRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ   92 (304)
T ss_pred             cHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence            345677889999999999999974         23579999886542 23346789999999999 89999999999999


Q ss_pred             CCcceEEEeeCCCCCHHHHHhhcCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCee
Q 026214          129 TPIPILAFESVEYGNLRDRILSASQP-----------QTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHIL  197 (241)
Q Consensus       129 ~~~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nil  197 (241)
                      ....+++|||+++++|.+++......           ....+++..+..++.|++.||.|||   +.+++|+||||+||+
T Consensus        93 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~givH~dlkp~Nil  169 (304)
T cd05101          93 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLA---SQKCIHRDLAARNVL  169 (304)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHH---HCCeeecccccceEE
Confidence            99999999999999999999764210           1235788899999999999999999   999999999999999


Q ss_pred             EcCCCcEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          198 FNEENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       198 l~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ++.++.++|+|||+++.+........ ...+..+..|.+||
T Consensus       170 i~~~~~~kl~D~g~~~~~~~~~~~~~-~~~~~~~~~y~aPE  209 (304)
T cd05101         170 VTENNVMKIADFGLARDVNNIDYYKK-TTNGRLPVKWMAPE  209 (304)
T ss_pred             EcCCCcEEECCCccceeccccccccc-ccCCCCCceeeCch
Confidence            99999999999999988755433221 12333445688887

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.95  E-value=1.7e-26  Score=189.24  Aligned_cols=167  Identities=15%  Similarity=0.160  Sum_probs=139.7

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeC
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESV  139 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  139 (241)
                      +|...+.||.|+||.||++.+  ++..+++|.+.... ....+.+.+|+.+++.++||||+++++++.+.+..++++||+
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC   80 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence            366788999999999999998  78899999886432 234567888999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCC
Q 026214          140 EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGG  219 (241)
Q Consensus       140 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~  219 (241)
                      ++++|.+++...   ....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++++|||++.......
T Consensus        81 ~~~~l~~~~~~~---~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~  154 (255)
T cd08219          81 DGGDLMQKIKLQ---RGKLFPEDTILQWFVQMCLGVQHIH---EKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG  154 (255)
T ss_pred             CCCcHHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEECCCCcEEEcccCcceeecccc
Confidence            999999998654   2345789999999999999999999   9999999999999999999999999999998775443


Q ss_pred             ccccceeecCCceeeeecC
Q 026214          220 TSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~e  238 (241)
                      ....   ....+..|++||
T Consensus       155 ~~~~---~~~~~~~~~aPE  170 (255)
T cd08219         155 AYAC---TYVGTPYYVPPE  170 (255)
T ss_pred             cccc---cccCCccccCHH
Confidence            2111   122344567776

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=1e-26  Score=190.87  Aligned_cols=151  Identities=22%  Similarity=0.264  Sum_probs=136.3

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      .++|...+.||.|++|.||+|.+  ++..+++|.+........+.+.+|+.+++.++||||+++++++......+++|||
T Consensus         2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~   81 (262)
T cd06613           2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY   81 (262)
T ss_pred             ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence            35688889999999999999998  6788999999876555667899999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      +++++|.+++...    ...+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++..+...
T Consensus        82 ~~~~~l~~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~  154 (262)
T cd06613          82 CGGGSLQDIYQVT----RGPLSELQIAYVCRETLKGLAYLH---ETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTAT  154 (262)
T ss_pred             CCCCcHHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHH---hCCceecCCChhhEEECCCCCEEECccccchhhhhh
Confidence            9999999988654    246889999999999999999999   999999999999999999999999999999876543

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=9.3e-28  Score=202.47  Aligned_cols=172  Identities=21%  Similarity=0.174  Sum_probs=142.5

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCc-------chhhHHHHHHHHHhcCCCceeeEeeEEec-CC
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRD-------GHGSCINNIVYAAQMSHDHILKLIGCCLE-TP  130 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~  130 (241)
                      .+.|....+||.|+|+.||++++  ..+.||+|+......+       -.+...+|.++.+.|+||-||++++++.- .+
T Consensus       462 n~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtd  541 (775)
T KOG1151|consen  462 NDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTD  541 (775)
T ss_pred             HHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccc
Confidence            34566678999999999999999  6788999986543211       12457899999999999999999999964 45


Q ss_pred             cceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcC---CCcEEEc
Q 026214          131 IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNE---ENVAKMF  207 (241)
Q Consensus       131 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~---~~~~ki~  207 (241)
                      .++-|+|||+|.+|+-+|...     ..+++..+..|+.||+.||.||... ..+|||.||||.|||+..   -|.+||+
T Consensus       542 sFCTVLEYceGNDLDFYLKQh-----klmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKIT  615 (775)
T KOG1151|consen  542 SFCTVLEYCEGNDLDFYLKQH-----KLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKIT  615 (775)
T ss_pred             cceeeeeecCCCchhHHHHhh-----hhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEee
Confidence            678899999999999888554     4589999999999999999999844 568999999999999954   4789999


Q ss_pred             cccCceecCCCCcc----ccceeecCCceeeeecC
Q 026214          208 DFSLSISIPEGGTS----GAKCLKSERTEICCVRE  238 (241)
Q Consensus       208 DfG~a~~~~~~~~~----~~~~~~~~~~~~~~~~e  238 (241)
                      |||+++.++.++..    -..+.++.++.||.+||
T Consensus       616 DFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPE  650 (775)
T KOG1151|consen  616 DFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPE  650 (775)
T ss_pred             ecchhhhccCCccCcccceeeecccCceeeecCcc
Confidence            99999998765432    34557888999999998

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.95  E-value=6.8e-27  Score=195.22  Aligned_cols=177  Identities=18%  Similarity=0.251  Sum_probs=139.0

Q ss_pred             HHhcCCCcCCeeecccceEEEEEEE-------CCeEEEEEEeeccCC-cchhhHHHHHHHHHhcCCCceeeEeeEEecCC
Q 026214           59 LATNNYDQKNVITEDWGCILYKGFW-------QERLISVMRFRESNR-DGHGSCINNIVYAAQMSHDHILKLIGCCLETP  130 (241)
Q Consensus        59 ~~~~~~~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  130 (241)
                      ...++|...+.||+|+||.||+|..       .+..||+|.+..... .....+.+|+.+++.++||||+++++++...+
T Consensus         3 ~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~   82 (288)
T cd05061           3 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ   82 (288)
T ss_pred             ccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence            3456788899999999999999975       245799998765432 22345788999999999999999999999999


Q ss_pred             cceEEEeeCCCCCHHHHHhhcCC-----CCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEE
Q 026214          131 IPILAFESVEYGNLRDRILSASQ-----PQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAK  205 (241)
Q Consensus       131 ~~~lv~e~~~~gsL~~~l~~~~~-----~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~k  205 (241)
                      ..+++|||+++|+|.+++.....     .....+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.++
T Consensus        83 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dikp~nili~~~~~~~  159 (288)
T cd05061          83 PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVK  159 (288)
T ss_pred             CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCCChheEEEcCCCcEE
Confidence            99999999999999999975321     01234567788999999999999999   99999999999999999999999


Q ss_pred             EccccCceecCCCCccccceeecCCceeeeecCC
Q 026214          206 MFDFSLSISIPEGGTSGAKCLKSERTEICCVREN  239 (241)
Q Consensus       206 i~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e~  239 (241)
                      ++|||+++.+........ ......+..|++||-
T Consensus       160 L~Dfg~~~~~~~~~~~~~-~~~~~~~~~y~~pE~  192 (288)
T cd05061         160 IGDFGMTRDIYETDYYRK-GGKGLLPVRWMAPES  192 (288)
T ss_pred             ECcCCccccccccccccc-cCCCcccccccCHHH
Confidence            999999986644322111 111122345777773

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.95  E-value=1.3e-26  Score=191.16  Aligned_cols=169  Identities=20%  Similarity=0.223  Sum_probs=136.8

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC-----cchhhHHHHHHHHHhcCCCceeeEeeEEec--CCcc
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR-----DGHGSCINNIVYAAQMSHDHILKLIGCCLE--TPIP  132 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~  132 (241)
                      .+|...+.||+|+||.||++.+  ++..|++|.+.....     .....+.+|+.+++.++||||+++++++..  ....
T Consensus         2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL   81 (266)
T ss_pred             CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence            4788899999999999999998  788999998864321     123457889999999999999999998865  3567


Q ss_pred             eEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCc
Q 026214          133 ILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS  212 (241)
Q Consensus       133 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a  212 (241)
                      ++++||+++++|.+++...     ..+++.....++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++
T Consensus        82 ~l~~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~LH---~~~i~H~~l~p~nil~~~~~~~~l~dfg~~  153 (266)
T cd06651          82 TIFMEYMPGGSVKDQLKAY-----GALTESVTRKYTRQILEGMSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGAS  153 (266)
T ss_pred             EEEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEccCCCc
Confidence            8999999999999999654     34788999999999999999999   999999999999999999999999999999


Q ss_pred             eecCCCCccccceeecCCceeeeecC
Q 026214          213 ISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ..+...............+..|.+||
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~y~aPE  179 (266)
T cd06651         154 KRLQTICMSGTGIRSVTGTPYWMSPE  179 (266)
T ss_pred             cccccccccCCccccCCccccccCHH
Confidence            87654321111111122344567776

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.95  E-value=1.1e-26  Score=191.11  Aligned_cols=167  Identities=16%  Similarity=0.227  Sum_probs=136.4

Q ss_pred             cCCCcCCeeecccceEEEEEEE-CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCC
Q 026214           62 NNYDQKNVITEDWGCILYKGFW-QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVE  140 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~  140 (241)
                      +.|.....||+|++|.||++.+ .+..+|+|.+.... .....+.+|+.+++.++|||++++++++. .+..+++|||++
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~   83 (260)
T cd05069           6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMG   83 (260)
T ss_pred             HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCC
Confidence            4577788999999999999998 55579999876543 23467889999999999999999998875 456899999999


Q ss_pred             CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCc
Q 026214          141 YGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGT  220 (241)
Q Consensus       141 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~  220 (241)
                      +++|.+++...   ....+++..+..++.|++.||.|||   +.+++|+||+|+||++++++.++|+|||++..+.....
T Consensus        84 ~~~L~~~~~~~---~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~  157 (260)
T cd05069          84 KGSLLDFLKEG---DGKYLKLPQLVDMAAQIADGMAYIE---RMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEY  157 (260)
T ss_pred             CCCHHHHHhhC---CCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCeEEECCCccceEccCCcc
Confidence            99999999664   2345789999999999999999999   99999999999999999999999999999987754322


Q ss_pred             cccceeecCCceeeeecC
Q 026214          221 SGAKCLKSERTEICCVRE  238 (241)
Q Consensus       221 ~~~~~~~~~~~~~~~~~e  238 (241)
                      ...  .....+..|++||
T Consensus       158 ~~~--~~~~~~~~y~~Pe  173 (260)
T cd05069         158 TAR--QGAKFPIKWTAPE  173 (260)
T ss_pred             ccc--CCCccchhhCCHH
Confidence            111  1112334577777

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.95  E-value=5e-27  Score=202.15  Aligned_cols=162  Identities=17%  Similarity=0.199  Sum_probs=135.0

Q ss_pred             HHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           59 LATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        59 ~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      ....+|...+.||+|+||.||+|.+  ++..||+|.....      ....|+.++..++||||+++++++...+..++++
T Consensus        63 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  136 (357)
T PHA03209         63 VASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVL  136 (357)
T ss_pred             hhhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEE
Confidence            3446799999999999999999999  6778999974332      2457999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      |++. ++|.+++...    ...+++..+..++.|++.||.|||   ..+|+||||||+|||++.++.++|+|||++....
T Consensus       137 e~~~-~~l~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~  208 (357)
T PHA03209        137 PHYS-SDLYTYLTKR----SRPLPIDQALIIEKQILEGLRYLH---AQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPV  208 (357)
T ss_pred             EccC-CcHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEecCccccccc
Confidence            9996 6999988654    456899999999999999999999   9999999999999999999999999999997543


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .....    ....++..|++||
T Consensus       209 ~~~~~----~~~~gt~~y~aPE  226 (357)
T PHA03209        209 VAPAF----LGLAGTVETNAPE  226 (357)
T ss_pred             cCccc----ccccccccccCCe
Confidence            22111    1223455677887

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.95  E-value=1.2e-26  Score=191.74  Aligned_cols=152  Identities=22%  Similarity=0.364  Sum_probs=126.3

Q ss_pred             CCcCCeeecccceEEEEEEE--CC--eEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEecC------Cc
Q 026214           64 YDQKNVITEDWGCILYKGFW--QE--RLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLET------PI  131 (241)
Q Consensus        64 ~~~~~~lg~G~~g~Vy~~~~--~~--~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~  131 (241)
                      |...+.||+|+||.||+|.+  ++  ..+|+|.+....  ......+.+|+.++..++||||+++++++...      ..
T Consensus         1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   80 (272)
T cd05075           1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS   80 (272)
T ss_pred             CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence            34578899999999999998  33  368999876542  23356788999999999999999999987532      25


Q ss_pred             ceEEEeeCCCCCHHHHHhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEcccc
Q 026214          132 PILAFESVEYGNLRDRILSASQ-PQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFS  210 (241)
Q Consensus       132 ~~lv~e~~~~gsL~~~l~~~~~-~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG  210 (241)
                      .++++||+++|+|.+++..... .....+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.++|+|||
T Consensus        81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg  157 (272)
T cd05075          81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLS---SKSFIHRDLAARNCMLNENMNVCVADFG  157 (272)
T ss_pred             cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhheEEcCCCCEEECCCC
Confidence            7899999999999998854321 12445899999999999999999999   9999999999999999999999999999


Q ss_pred             CceecCCC
Q 026214          211 LSISIPEG  218 (241)
Q Consensus       211 ~a~~~~~~  218 (241)
                      +++.+...
T Consensus       158 ~~~~~~~~  165 (272)
T cd05075         158 LSKKIYNG  165 (272)
T ss_pred             cccccCcc
Confidence            99987544

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.95  E-value=1.6e-26  Score=192.18  Aligned_cols=166  Identities=19%  Similarity=0.217  Sum_probs=137.8

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEe
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFE  137 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  137 (241)
                      ++|.....||+|++|.||+|.+  ++..||+|++....  ....+.+.+|+.++..++|||++++++++......+++||
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e   80 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE   80 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence            3577888999999999999998  68999999987543  1233567899999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCC
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE  217 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~  217 (241)
                      |+++++|..++...     ..+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++..+..
T Consensus        81 ~~~~~~l~~~~~~~-----~~~~~~~~~~~~~ql~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~  152 (286)
T cd07847          81 YCDHTVLNELEKNP-----RGVPEHLIKKIIWQTLQAVNFCH---KHNCIHRDVKPENILITKQGQIKLCDFGFARILTG  152 (286)
T ss_pred             ccCccHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCChhhEEEcCCCcEEECccccceecCC
Confidence            99988887776432     35899999999999999999999   99999999999999999999999999999998765


Q ss_pred             CCccccceeecCCceeeeecC
Q 026214          218 GGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ......   ....+..|++||
T Consensus       153 ~~~~~~---~~~~~~~~~aPE  170 (286)
T cd07847         153 PGDDYT---DYVATRWYRAPE  170 (286)
T ss_pred             Cccccc---CcccccccCCHH
Confidence            432111   112334566666

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.95  E-value=1.3e-26  Score=193.45  Aligned_cols=147  Identities=21%  Similarity=0.322  Sum_probs=130.2

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCc-chhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRD-GHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      ++|...+.||.|++|.||+|..  ++..||+|.+...... ....+.+|+.+++.++||||+++++++...+..++||||
T Consensus         5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (291)
T cd07844           5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY   84 (291)
T ss_pred             cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence            5678889999999999999998  7889999998754322 234577899999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ++ ++|.+++...    ...+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||+++...
T Consensus        85 ~~-~~L~~~~~~~----~~~~~~~~~~~~~~ql~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~  154 (291)
T cd07844          85 LD-TDLKQYMDDC----GGGLSMHNVRLFLFQLLRGLAYCH---QRRVLHRDLKPQNLLISERGELKLADFGLARAKS  154 (291)
T ss_pred             CC-CCHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCHHHEEEcCCCCEEECccccccccC
Confidence            98 5999988664    336889999999999999999999   9999999999999999999999999999997654

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.95  E-value=4.1e-28  Score=211.52  Aligned_cols=178  Identities=19%  Similarity=0.298  Sum_probs=155.2

Q ss_pred             HHHHHHHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCc
Q 026214           54 AQELKLATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPI  131 (241)
Q Consensus        54 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  131 (241)
                      .++|+..........+||-|-||.||.|.|  ....||||.++.+. ....+|+.|..+|+.++|||+|+|+|+|.....
T Consensus       259 ~DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt-MeveEFLkEAAvMKeikHpNLVqLLGVCT~EpP  337 (1157)
T KOG4278|consen  259 ADKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPP  337 (1157)
T ss_pred             cchhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcc-hhHHHHHHHHHHHHhhcCccHHHHhhhhccCCC
Confidence            367777777777789999999999999999  77889999998876 467889999999999999999999999999999


Q ss_pred             ceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccC
Q 026214          132 PILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL  211 (241)
Q Consensus       132 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~  211 (241)
                      +|+|+|||.+|+|.++|...   ....++.-..+.++.||..||.||.   .+++|||||.++|+|+.++..+||+|||+
T Consensus       338 FYIiTEfM~yGNLLdYLRec---nr~ev~avvLlyMAtQIsSaMeYLE---kknFIHRDLAARNCLVgEnhiVKvADFGL  411 (1157)
T KOG4278|consen  338 FYIITEFMCYGNLLDYLREC---NRSEVPAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHIVKVADFGL  411 (1157)
T ss_pred             eEEEEecccCccHHHHHHHh---chhhcchhHHHHHHHHHHHHHHHHH---HhhhhhhhhhhhhccccccceEEeeccch
Confidence            99999999999999999887   4566788888999999999999999   99999999999999999999999999999


Q ss_pred             ceecCCCCccccceeecCCceeeeecCCC
Q 026214          212 SISIPEGGTSGAKCLKSERTEICCVRENK  240 (241)
Q Consensus       212 a~~~~~~~~~~~~~~~~~~~~~~~~~e~~  240 (241)
                      ++++..|.-  +.......+--|-|||.-
T Consensus       412 sRlMtgDTY--TAHAGAKFPIKWTAPEsL  438 (1157)
T KOG4278|consen  412 SRLMTGDTY--TAHAGAKFPIKWTAPESL  438 (1157)
T ss_pred             hhhhcCCce--ecccCccCcccccCcccc
Confidence            999887742  233334444456777753

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.95  E-value=9.1e-27  Score=195.12  Aligned_cols=173  Identities=18%  Similarity=0.211  Sum_probs=137.9

Q ss_pred             cCCCcCCeeecccceEEEEEEEC----------------CeEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEee
Q 026214           62 NNYDQKNVITEDWGCILYKGFWQ----------------ERLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIG  124 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~~----------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~  124 (241)
                      +.|...+.||+|+||.||++...                ...||+|.+.... ......+.+|+.++.+++|||++++++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~   84 (295)
T cd05097           5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG   84 (295)
T ss_pred             HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence            46788899999999999998762                2358999987643 223456889999999999999999999


Q ss_pred             EEecCCcceEEEeeCCCCCHHHHHhhcCC-------CCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCee
Q 026214          125 CCLETPIPILAFESVEYGNLRDRILSASQ-------PQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHIL  197 (241)
Q Consensus       125 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~-------~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nil  197 (241)
                      ++...+..+++|||+++++|.+++.....       .....+++..++.++.|++.||.|||   +.+++|+||||+||+
T Consensus        85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~Nil  161 (295)
T cd05097          85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLA---SLNFVHRDLATRNCL  161 (295)
T ss_pred             EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHH---hcCeeccccChhhEE
Confidence            99999999999999999999999965311       01124688899999999999999999   999999999999999


Q ss_pred             EcCCCcEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          198 FNEENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       198 l~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ++.++.+||+|||++..+....... .......+..|.+||
T Consensus       162 l~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE  201 (295)
T cd05097         162 VGNHYTIKIADFGMSRNLYSGDYYR-IQGRAVLPIRWMAWE  201 (295)
T ss_pred             EcCCCcEEecccccccccccCccee-ccCcCcCceeecChh
Confidence            9999999999999998764432211 111112245678887

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.95  E-value=1.2e-26  Score=192.80  Aligned_cols=169  Identities=20%  Similarity=0.297  Sum_probs=136.6

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCe----EEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QER----LISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPIL  134 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  134 (241)
                      ..|...+.||.|+||.||+|.+  ++.    .||+|.+.... ......+.+|+.++..++||||+++++++.. ...++
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l   85 (279)
T cd05109           7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQL   85 (279)
T ss_pred             hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEE
Confidence            4577789999999999999987  443    58999886543 2234668899999999999999999999875 45788


Q ss_pred             EEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCcee
Q 026214          135 AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSIS  214 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~  214 (241)
                      ++||+++|+|.+++...    ...+++..++.++.|++.||.|||   +.+++|+||||+|||++.++.+||+|||+++.
T Consensus        86 ~~~~~~~g~l~~~l~~~----~~~~~~~~~~~~~~qi~~~L~~lH---~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~  158 (279)
T cd05109          86 VTQLMPYGCLLDYVREN----KDRIGSQDLLNWCVQIAKGMSYLE---EVRLVHRDLAARNVLVKSPNHVKITDFGLARL  158 (279)
T ss_pred             EEEcCCCCCHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccccceEEEcCCCcEEECCCCceee
Confidence            99999999999999654    345899999999999999999999   99999999999999999999999999999998


Q ss_pred             cCCCCccccceeecCCceeeeecCC
Q 026214          215 IPEGGTSGAKCLKSERTEICCVREN  239 (241)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~e~  239 (241)
                      +........ ......+..|++||.
T Consensus       159 ~~~~~~~~~-~~~~~~~~~y~~PE~  182 (279)
T cd05109         159 LDIDETEYH-ADGGKVPIKWMALES  182 (279)
T ss_pred             cccccceee-cCCCccchhhCCHHH
Confidence            764432211 112233345778874

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.95  E-value=1.4e-26  Score=190.07  Aligned_cols=162  Identities=20%  Similarity=0.285  Sum_probs=134.0

Q ss_pred             CeeecccceEEEEEEE--CC---eEEEEEEeeccCC-cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCCC
Q 026214           68 NVITEDWGCILYKGFW--QE---RLISVMRFRESNR-DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEY  141 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~--~~---~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~  141 (241)
                      ++||+|+||.||+|.+  .+   ..+|+|.+..... ...+.+.+|+.+++.++||||+++++++. .+..+++|||+++
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~   79 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL   79 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence            4689999999999987  22   6799999876543 23467899999999999999999999876 4568999999999


Q ss_pred             CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCcc
Q 026214          142 GNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTS  221 (241)
Q Consensus       142 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~  221 (241)
                      ++|.+++...     ..+++..+..++.|++.||.|||   ..+++|+||||+||+++.++.++|+|||+++.+......
T Consensus        80 ~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~  151 (257)
T cd05060          80 GPLLKYLKKR-----REIPVSDLKELAHQVAMGMAYLE---SKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDY  151 (257)
T ss_pred             CcHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHh---hcCeeccCcccceEEEcCCCcEEeccccccceeecCCcc
Confidence            9999999654     25899999999999999999999   999999999999999999999999999999987655433


Q ss_pred             ccceeecCCceeeeecC
Q 026214          222 GAKCLKSERTEICCVRE  238 (241)
Q Consensus       222 ~~~~~~~~~~~~~~~~e  238 (241)
                      ......+..+..|++||
T Consensus       152 ~~~~~~~~~~~~y~aPE  168 (257)
T cd05060         152 YRATTAGRWPLKWYAPE  168 (257)
T ss_pred             cccccCccccccccCHH
Confidence            32222333334578887

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.95  E-value=3.4e-27  Score=206.93  Aligned_cols=147  Identities=18%  Similarity=0.217  Sum_probs=130.7

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcC-C-----CceeeEeeEEecCCcceE
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMS-H-----DHILKLIGCCLETPIPIL  134 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-----~niv~l~~~~~~~~~~~l  134 (241)
                      .|...+.||+|+||.|-+|++  ++..||||+++... ....+...|+.+|..|+ |     -|+|+++++|...++.+|
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci  265 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI  265 (586)
T ss_pred             EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence            456688999999999999999  89999999998765 34566788999999996 4     389999999999999999


Q ss_pred             EEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCC--CcEEEccccCc
Q 026214          135 AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEE--NVAKMFDFSLS  212 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~--~~~ki~DfG~a  212 (241)
                      |+|.+. .+|++++..+   ....++...+..++.||+.||.+||   +.+|||+||||+||||.+.  ..+||+|||.|
T Consensus       266 VfELL~-~NLYellK~n---~f~Glsl~~ir~~~~Qil~~L~~L~---~l~IIHcDLKPENILL~~~~r~~vKVIDFGSS  338 (586)
T KOG0667|consen  266 VFELLS-TNLYELLKNN---KFRGLSLPLVRKFAQQILTALLFLH---ELGIIHCDLKPENILLKDPKRSRIKVIDFGSS  338 (586)
T ss_pred             eehhhh-hhHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCChhheeeccCCcCceeEEecccc
Confidence            999997 6999999887   5667999999999999999999999   9999999999999999754  47999999999


Q ss_pred             eecCC
Q 026214          213 ISIPE  217 (241)
Q Consensus       213 ~~~~~  217 (241)
                      .....
T Consensus       339 c~~~q  343 (586)
T KOG0667|consen  339 CFESQ  343 (586)
T ss_pred             cccCC
Confidence            86543

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.95  E-value=4.5e-27  Score=202.07  Aligned_cols=165  Identities=16%  Similarity=0.194  Sum_probs=135.6

Q ss_pred             HHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEecCC----
Q 026214           59 LATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLETP----  130 (241)
Q Consensus        59 ~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----  130 (241)
                      ...++|...+.||+|+||.||++.+  ++..||+|.+....  ......+.+|+.+++.++||||+++++++....    
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~   93 (355)
T cd07874          14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE   93 (355)
T ss_pred             hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence            3557899999999999999999998  78899999987532  223467889999999999999999999886443    


Q ss_pred             --cceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEcc
Q 026214          131 --IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFD  208 (241)
Q Consensus       131 --~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~D  208 (241)
                        ..+++|||++ ++|.+.+..       .+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|
T Consensus        94 ~~~~~lv~e~~~-~~l~~~~~~-------~l~~~~~~~~~~qi~~aL~~LH---~~givHrDikp~Nill~~~~~~kl~D  162 (355)
T cd07874          94 FQDVYLVMELMD-ANLCQVIQM-------ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILD  162 (355)
T ss_pred             cceeEEEhhhhc-ccHHHHHhh-------cCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEECCCCCEEEee
Confidence              4699999997 578777733       3788899999999999999999   99999999999999999999999999


Q ss_pred             ccCceecCCCCccccceeecCCceeeeecC
Q 026214          209 FSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       209 fG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ||+++.........    ...++..|+|||
T Consensus       163 fg~~~~~~~~~~~~----~~~~t~~y~aPE  188 (355)
T cd07874         163 FGLARTAGTSFMMT----PYVVTRYYRAPE  188 (355)
T ss_pred             CcccccCCCccccC----CccccCCccCHH
Confidence            99998764432211    223455678887

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.95  E-value=1.2e-26  Score=193.79  Aligned_cols=172  Identities=22%  Similarity=0.270  Sum_probs=136.9

Q ss_pred             CCCcCCeeecccceEEEEEEEC-------CeEEEEEEeeccCC-cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceE
Q 026214           63 NYDQKNVITEDWGCILYKGFWQ-------ERLISVMRFRESNR-DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPIL  134 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~~-------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  134 (241)
                      +|...+.||+|+||.||+|...       ...+++|.+..... .....+.+|+.+++.++||||+++++.+...+..++
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   80 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL   80 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence            3667889999999999999872       25688888765432 234678899999999999999999999999999999


Q ss_pred             EEeeCCCCCHHHHHhhcCC-------------------CCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCC
Q 026214          135 AFESVEYGNLRDRILSASQ-------------------PQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH  195 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~~~-------------------~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~N  195 (241)
                      ++||+.+++|.+++.....                   .....+++..++.++.|++.||.|||   +.+++|+||||+|
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~ivH~dikp~n  157 (290)
T cd05045          81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLA---EMKLVHRDLAARN  157 (290)
T ss_pred             EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHH---HCCeehhhhhhhe
Confidence            9999999999999865311                   11245789999999999999999999   9999999999999


Q ss_pred             eeEcCCCcEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          196 ILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       196 ill~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |++++++.++|+|||+++.+........ ......+..|++||
T Consensus       158 ill~~~~~~kl~dfg~~~~~~~~~~~~~-~~~~~~~~~y~apE  199 (290)
T cd05045         158 VLVAEGRKMKISDFGLSRDVYEEDSYVK-RSKGRIPVKWMAIE  199 (290)
T ss_pred             EEEcCCCcEEeccccccccccCccchhc-ccCCCCCccccCHH
Confidence            9999999999999999987644332211 11122233567776

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.95  E-value=1.4e-26  Score=193.56  Aligned_cols=172  Identities=19%  Similarity=0.224  Sum_probs=140.1

Q ss_pred             CCCcCCeeecccceEEEEEEE-------CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEE
Q 026214           63 NYDQKNVITEDWGCILYKGFW-------QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA  135 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  135 (241)
                      +|...+.||+|+||.||+|..       +...+++|.+........+.+.+|+.++++++||||+++++++...+..+++
T Consensus         6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   85 (291)
T cd05094           6 DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMV   85 (291)
T ss_pred             HeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEE
Confidence            466778999999999999975       3456889988765544556789999999999999999999999999999999


Q ss_pred             EeeCCCCCHHHHHhhcCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcE
Q 026214          136 FESVEYGNLRDRILSASQ-----------PQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVA  204 (241)
Q Consensus       136 ~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~  204 (241)
                      |||+++++|.+++.....           .....+++..++.++.|++.||.|||   +.+++|+||||+||+++.++.+
T Consensus        86 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~Nil~~~~~~~  162 (291)
T cd05094          86 FEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLA---SQHFVHRDLATRNCLVGANLLV  162 (291)
T ss_pred             EecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccCcceEEEccCCcE
Confidence            999999999999975421           11245889999999999999999999   9999999999999999999999


Q ss_pred             EEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          205 KMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       205 ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +|+|||++.......... .......+..|++||
T Consensus       163 ~l~dfg~a~~~~~~~~~~-~~~~~~~~~~y~aPE  195 (291)
T cd05094         163 KIGDFGMSRDVYSTDYYR-VGGHTMLPIRWMPPE  195 (291)
T ss_pred             EECCCCcccccCCCceee-cCCCCCcceeecChH
Confidence            999999998665432211 111122345678888

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.95  E-value=1.2e-26  Score=195.38  Aligned_cols=173  Identities=15%  Similarity=0.233  Sum_probs=141.4

Q ss_pred             HHhcCCCcCCeeecccceEEEEEEE-------CCeEEEEEEeeccCC-cchhhHHHHHHHHHhc-CCCceeeEeeEEecC
Q 026214           59 LATNNYDQKNVITEDWGCILYKGFW-------QERLISVMRFRESNR-DGHGSCINNIVYAAQM-SHDHILKLIGCCLET  129 (241)
Q Consensus        59 ~~~~~~~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~  129 (241)
                      ...++|...+.||+|+||.||++.+       ++..||+|.+..... ...+.+.+|+.+++++ +||||+++++++...
T Consensus        32 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~  111 (302)
T cd05055          32 FPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIG  111 (302)
T ss_pred             ccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecC
Confidence            3345688899999999999999975       345799998875432 2345688999999999 899999999999999


Q ss_pred             CcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccc
Q 026214          130 PIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDF  209 (241)
Q Consensus       130 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~Df  209 (241)
                      +..+++|||+++++|.+++...   ....+++..+..++.|++.||.|||   +.+++|+||||+|||++.++.++++||
T Consensus       112 ~~~~lv~e~~~~~~L~~~i~~~---~~~~l~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~df  185 (302)
T cd05055         112 GPILVITEYCCYGDLLNFLRRK---RESFLTLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNVLLTHGKIVKICDF  185 (302)
T ss_pred             CceEEEEEcCCCCcHHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHH---HCCeehhhhccceEEEcCCCeEEECCC
Confidence            9999999999999999999654   2234899999999999999999999   999999999999999999999999999


Q ss_pred             cCceecCCCCccccceeecCCceeeeecC
Q 026214          210 SLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       210 G~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |+++.+........ ......+..|.+||
T Consensus       186 g~~~~~~~~~~~~~-~~~~~~~~~y~aPE  213 (302)
T cd05055         186 GLARDIMNDSNYVV-KGNARLPVKWMAPE  213 (302)
T ss_pred             cccccccCCCceee-cCCCCcccccCCHh
Confidence            99987754432111 11122345678888

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.95  E-value=1.9e-26  Score=188.26  Aligned_cols=143  Identities=24%  Similarity=0.329  Sum_probs=126.4

Q ss_pred             CeeecccceEEEEEEE-CCeEEEEEEeeccCCc-chhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCCCCCHH
Q 026214           68 NVITEDWGCILYKGFW-QERLISVMRFRESNRD-GHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLR  145 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~  145 (241)
                      ++||+|+||.||+|.. ++..+|+|.+...... ....+.+|+.++..++||||+++++++...+..+++|||+++++|.
T Consensus         1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   80 (250)
T cd05085           1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL   80 (250)
T ss_pred             CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence            3689999999999988 7788999988765322 2346889999999999999999999999999999999999999999


Q ss_pred             HHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCC
Q 026214          146 DRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE  217 (241)
Q Consensus       146 ~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~  217 (241)
                      +++...    ...+++..+..++.|++.||.|+|   ..+++|+||+|+||+++.++.++++|||++.....
T Consensus        81 ~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~  145 (250)
T cd05085          81 SFLRKK----KDELKTKQLVKFALDAAAGMAYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDD  145 (250)
T ss_pred             HHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccChheEEEcCCCeEEECCCccceeccc
Confidence            998654    345789999999999999999999   99999999999999999999999999999976543

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.95  E-value=1.4e-26  Score=190.95  Aligned_cols=143  Identities=25%  Similarity=0.359  Sum_probs=123.2

Q ss_pred             CeeecccceEEEEEEE--------------CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcce
Q 026214           68 NVITEDWGCILYKGFW--------------QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPI  133 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~--------------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  133 (241)
                      +.||+|+||.||+|+.              ....|++|.+..........+.+|+.++..++||||+++++++......+
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~   80 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI   80 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence            3689999999999985              12358888877655445567888999999999999999999999999999


Q ss_pred             EEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCc-------EEE
Q 026214          134 LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENV-------AKM  206 (241)
Q Consensus       134 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~-------~ki  206 (241)
                      ++|||+++++|..++...    ...+++..+..++.|++.||.|||   +.+++||||||+|||++.++.       +++
T Consensus        81 lv~e~~~~~~l~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l  153 (262)
T cd05077          81 MVEEFVEFGPLDLFMHRK----SDVLTTPWKFKVAKQLASALSYLE---DKDLVHGNVCTKNILLAREGIDGECGPFIKL  153 (262)
T ss_pred             EEEecccCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHhh---hCCeECCCCCcccEEEecCCccCCCCceeEe
Confidence            999999999999888654    345899999999999999999999   999999999999999986654       899


Q ss_pred             ccccCceecCC
Q 026214          207 FDFSLSISIPE  217 (241)
Q Consensus       207 ~DfG~a~~~~~  217 (241)
                      +|||++..+..
T Consensus       154 ~d~g~~~~~~~  164 (262)
T cd05077         154 SDPGIPITVLS  164 (262)
T ss_pred             CCCCCCccccC
Confidence            99999876643

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.95  E-value=3.8e-27  Score=201.37  Aligned_cols=175  Identities=18%  Similarity=0.260  Sum_probs=137.9

Q ss_pred             HhcCCCcCCeeecccceEEEEEEE-------CCeEEEEEEeeccC-CcchhhHHHHHHHHHhc-CCCceeeEeeEEecC-
Q 026214           60 ATNNYDQKNVITEDWGCILYKGFW-------QERLISVMRFRESN-RDGHGSCINNIVYAAQM-SHDHILKLIGCCLET-  129 (241)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~-  129 (241)
                      +.+.|...+.||.|+||.||+|.+       +++.||+|++.... ....+.+..|+.++.++ +||||+++++++... 
T Consensus         5 ~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~   84 (337)
T cd05054           5 PRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPG   84 (337)
T ss_pred             CHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCC
Confidence            345688899999999999999975       34789999987543 22345678899999999 899999999988654 


Q ss_pred             CcceEEEeeCCCCCHHHHHhhcCCC-------------------------------------------------------
Q 026214          130 PIPILAFESVEYGNLRDRILSASQP-------------------------------------------------------  154 (241)
Q Consensus       130 ~~~~lv~e~~~~gsL~~~l~~~~~~-------------------------------------------------------  154 (241)
                      ...++++||+++++|.+++......                                                       
T Consensus        85 ~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (337)
T cd05054          85 GPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDE  164 (337)
T ss_pred             CCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhH
Confidence            5678999999999999998643110                                                       


Q ss_pred             -CCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCccccceeecCCcee
Q 026214          155 -QTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSERTEI  233 (241)
Q Consensus       155 -~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~  233 (241)
                       ....+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.++|+|||++..+..+..... ......+..
T Consensus       165 ~~~~~l~~~~~~~~~~qi~~aL~~lH---~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~-~~~~~~~~~  240 (337)
T cd05054         165 LYKEPLTLEDLISYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVR-KGDARLPLK  240 (337)
T ss_pred             HhhcCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhh-ccCCCCCcc
Confidence             0136889999999999999999999   99999999999999999999999999999988754432211 112222345


Q ss_pred             eeecC
Q 026214          234 CCVRE  238 (241)
Q Consensus       234 ~~~~e  238 (241)
                      |++||
T Consensus       241 y~aPE  245 (337)
T cd05054         241 WMAPE  245 (337)
T ss_pred             ccCcH
Confidence            78887

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.95  E-value=1.3e-26  Score=195.56  Aligned_cols=171  Identities=20%  Similarity=0.199  Sum_probs=138.7

Q ss_pred             CCcCCeeecccceEEEEEEE----CCeEEEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEecC--CcceE
Q 026214           64 YDQKNVITEDWGCILYKGFW----QERLISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCLET--PIPIL  134 (241)
Q Consensus        64 ~~~~~~lg~G~~g~Vy~~~~----~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l  134 (241)
                      |...++||+|++|.||+|.+    ++..||+|.+....   ......+.+|+.++..++||||+++++++...  ...++
T Consensus         2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   81 (316)
T cd07842           2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYL   81 (316)
T ss_pred             ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEE
Confidence            67778999999999999998    46899999988733   33446788999999999999999999999988  78999


Q ss_pred             EEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcC----CCcEEEcccc
Q 026214          135 AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNE----ENVAKMFDFS  210 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~----~~~~ki~DfG  210 (241)
                      ||||++ ++|.+++..........+++..+..++.|++.||.|||   +.+++|+||||+||+++.    ++.+||+|||
T Consensus        82 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg  157 (316)
T cd07842          82 LFDYAE-HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLH---SNWVLHRDLKPANILVMGEGPERGVVKIGDLG  157 (316)
T ss_pred             EEeCCC-cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEEcCCCCccceEEECCCc
Confidence            999997 58888776543222346899999999999999999999   999999999999999999    8999999999


Q ss_pred             CceecCCCCccccceeecCCceeeeecC
Q 026214          211 LSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       211 ~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ++..+..........-....+..|++||
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE  185 (316)
T cd07842         158 LARLFNAPLKPLADLDPVVVTIWYRAPE  185 (316)
T ss_pred             cccccCCCcccccccCCccccccccCHH
Confidence            9987755433211111222344577887

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.95  E-value=1.4e-26  Score=192.56  Aligned_cols=167  Identities=19%  Similarity=0.191  Sum_probs=141.2

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      +|...+.||.|++|.||+|.+  ++..|++|.+....  ......+.+|+.+++.++||||+++++++..+...++|+||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~   80 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY   80 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence            367788999999999999998  78999999987654  22346789999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      + +++|.+++...    ..++++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++.....+
T Consensus        81 ~-~~~L~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~  152 (286)
T cd07832          81 M-PSDLSEVLRDE----ERPLPEAQVKSYMRMLLKGVAYMH---ANGIMHRDLKPANLLISADGVLKIADFGLARLFSEE  152 (286)
T ss_pred             c-CCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCC
Confidence            9 89999998765    356899999999999999999999   999999999999999999999999999999877654


Q ss_pred             CccccceeecCCceeeeecCC
Q 026214          219 GTSGAKCLKSERTEICCVREN  239 (241)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~e~  239 (241)
                      .....  .....+..|++||-
T Consensus       153 ~~~~~--~~~~~~~~y~aPE~  171 (286)
T cd07832         153 EPRLY--SHQVATRWYRAPEL  171 (286)
T ss_pred             CCCcc--ccccCcccccCcee
Confidence            32111  11234456777773

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.95  E-value=1.5e-26  Score=192.08  Aligned_cols=168  Identities=19%  Similarity=0.309  Sum_probs=136.8

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CC----eEEEEEEeeccCC-cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QE----RLISVMRFRESNR-DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPIL  134 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~----~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  134 (241)
                      ..|...+.||+|+||.||+|.+  ++    ..+|+|.+..... .....+.+|+.+++.++||||+++++++.. ...++
T Consensus         7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~   85 (279)
T cd05057           7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL   85 (279)
T ss_pred             HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence            3466778999999999999987  33    3689998765542 234678899999999999999999999987 78899


Q ss_pred             EEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCcee
Q 026214          135 AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSIS  214 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~  214 (241)
                      ++||+++|+|.+++...    ...+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||+++.
T Consensus        86 v~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~  158 (279)
T cd05057          86 ITQLMPLGCLLDYVRNH----KDNIGSQYLLNWCVQIAKGMSYLE---EKRLVHRDLAARNVLVKTPQHVKITDFGLAKL  158 (279)
T ss_pred             EEecCCCCcHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHH---hCCEEecccCcceEEEcCCCeEEECCCccccc
Confidence            99999999999999664    345899999999999999999999   89999999999999999999999999999988


Q ss_pred             cCCCCccccceeecCCceeeeecC
Q 026214          215 IPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +......... ..+..+..|++||
T Consensus       159 ~~~~~~~~~~-~~~~~~~~y~~PE  181 (279)
T cd05057         159 LDVDEKEYHA-EGGKVPIKWMALE  181 (279)
T ss_pred             ccCcccceec-CCCcccccccCHH
Confidence            7644332211 1122233467776

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.95  E-value=1.5e-26  Score=190.14  Aligned_cols=165  Identities=21%  Similarity=0.305  Sum_probs=130.9

Q ss_pred             CeeecccceEEEEEEE-----CCeEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEe-cCCcceEEEeeCC
Q 026214           68 NVITEDWGCILYKGFW-----QERLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCL-ETPIPILAFESVE  140 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~lv~e~~~  140 (241)
                      +.||+|+||.||+|.+     ....||+|.+.... ......+.+|+.+++.++||||+++++++. .++..++++||+.
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~   80 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK   80 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence            4689999999999986     23579999875432 233567889999999999999999999876 4556899999999


Q ss_pred             CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCc
Q 026214          141 YGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGT  220 (241)
Q Consensus       141 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~  220 (241)
                      +++|.+++...    ...+++..+..++.|++.||.|||   +.+++|+||||+|||++.++.+||+|||+++.+.....
T Consensus        81 ~~~L~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~  153 (262)
T cd05058          81 HGDLRNFIRSE----THNPTVKDLIGFGLQVAKGMEYLA---SKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEY  153 (262)
T ss_pred             CCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCccccccccCCcc
Confidence            99999999654    234677888899999999999999   99999999999999999999999999999987654322


Q ss_pred             cc-cceeecCCceeeeecCC
Q 026214          221 SG-AKCLKSERTEICCVREN  239 (241)
Q Consensus       221 ~~-~~~~~~~~~~~~~~~e~  239 (241)
                      .. ........+..|++||-
T Consensus       154 ~~~~~~~~~~~~~~y~aPE~  173 (262)
T cd05058         154 YSVHNHTGAKLPVKWMALES  173 (262)
T ss_pred             eeecccccCcCCccccChhH
Confidence            11 11112223446788873

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.95  E-value=1.2e-27  Score=210.73  Aligned_cols=167  Identities=22%  Similarity=0.363  Sum_probs=148.7

Q ss_pred             cCCeeecccceEEEEEEE---CC--eEEEEEEeeccCCc-chhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeC
Q 026214           66 QKNVITEDWGCILYKGFW---QE--RLISVMRFRESNRD-GHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESV  139 (241)
Q Consensus        66 ~~~~lg~G~~g~Vy~~~~---~~--~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  139 (241)
                      ..++||+|.||.|++|.|   .|  -.||||++..+... ....|++|+.+|.+|+|||+++|+|+..+ ....||||++
T Consensus       114 l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELa  192 (1039)
T KOG0199|consen  114 LYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELA  192 (1039)
T ss_pred             HHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhc
Confidence            357899999999999999   33  46899999887644 45789999999999999999999999987 6688999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCC
Q 026214          140 EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGG  219 (241)
Q Consensus       140 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~  219 (241)
                      +.|||.++|++.   ....+.......++.||+.||.||.   .+++|||||-++|+|+-..-.+||+||||.+.++.++
T Consensus       193 plGSLldrLrka---~~~~llv~~Lcdya~QiA~aM~YLe---skrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ne  266 (1039)
T KOG0199|consen  193 PLGSLLDRLRKA---KKAILLVSRLCDYAMQIAKAMQYLE---SKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENE  266 (1039)
T ss_pred             ccchHHHHHhhc---cccceeHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhhhheecccceeeeecccceeccCCCC
Confidence            999999999883   4667888999999999999999999   9999999999999999999999999999999999888


Q ss_pred             ccccceeecCCceeeeecCC
Q 026214          220 TSGAKCLKSERTEICCVREN  239 (241)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~e~  239 (241)
                      .......+-..+..|||||-
T Consensus       267 d~Yvm~p~rkvPfAWCaPEs  286 (1039)
T KOG0199|consen  267 DMYVMAPQRKVPFAWCAPES  286 (1039)
T ss_pred             cceEecCCCcCcccccCHhH
Confidence            88876666677788999983

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.95  E-value=1.4e-26  Score=189.77  Aligned_cols=141  Identities=23%  Similarity=0.343  Sum_probs=122.8

Q ss_pred             CeeecccceEEEEEEE--CC----------eEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEE
Q 026214           68 NVITEDWGCILYKGFW--QE----------RLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA  135 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~--~~----------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  135 (241)
                      +.||+|+||.||+|.+  ++          ..+++|.+...... ...+.+|+.+++.++||||+++++++.. ...+++
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv   78 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV   78 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence            4689999999999999  33          24788877654422 6778999999999999999999999988 778999


Q ss_pred             EeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCC-------cEEEcc
Q 026214          136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEEN-------VAKMFD  208 (241)
Q Consensus       136 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~-------~~ki~D  208 (241)
                      |||+++++|.+++...    ...+++..+..++.|++.||.|||   +.+++|+||||+||+++.++       .++|+|
T Consensus        79 ~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~D  151 (259)
T cd05037          79 EEYVKFGPLDVFLHRE----KNNVSLHWKLDVAKQLASALHYLE---DKKLVHGNVCGKNILVARYGLNEGYVPFIKLSD  151 (259)
T ss_pred             EEcCCCCcHHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHh---hCCeecccCccceEEEecCccccCCceeEEeCC
Confidence            9999999999999765    226889999999999999999999   99999999999999999887       799999


Q ss_pred             ccCceecCC
Q 026214          209 FSLSISIPE  217 (241)
Q Consensus       209 fG~a~~~~~  217 (241)
                      ||++.....
T Consensus       152 fg~a~~~~~  160 (259)
T cd05037         152 PGIPITVLS  160 (259)
T ss_pred             CCccccccc
Confidence            999987654

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.94  E-value=2.2e-26  Score=189.61  Aligned_cols=167  Identities=19%  Similarity=0.240  Sum_probs=137.8

Q ss_pred             CCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcc---------hhhHHHHHHHHHhcCCCceeeEeeEEecCCcc
Q 026214           64 YDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDG---------HGSCINNIVYAAQMSHDHILKLIGCCLETPIP  132 (241)
Q Consensus        64 ~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~---------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  132 (241)
                      |.....||.|++|.||+|.+  ++..+|+|.+.......         .+.+.+|+.++++++||||+++++++...+..
T Consensus         2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   81 (267)
T cd06628           2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL   81 (267)
T ss_pred             ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence            55678999999999999998  67899999886543221         24578899999999999999999999999999


Q ss_pred             eEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCc
Q 026214          133 ILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS  212 (241)
Q Consensus       133 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a  212 (241)
                      ++++||+++++|.+++...     ..+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++
T Consensus        82 ~lv~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~~l~~~l~~lH---~~~ivH~di~p~nil~~~~~~~~l~dfg~~  153 (267)
T cd06628          82 NIFLEYVPGGSVAALLNNY-----GAFEETLVRNFVRQILKGLNYLH---NRGIIHRDIKGANILVDNKGGIKISDFGIS  153 (267)
T ss_pred             EEEEEecCCCCHHHHHHhc-----cCccHHHHHHHHHHHHHHHHHHH---hcCcccccCCHHHEEEcCCCCEEecccCCC
Confidence            9999999999999999553     45788899999999999999999   999999999999999999999999999999


Q ss_pred             eecCCCCccc---cceeecCCceeeeecC
Q 026214          213 ISIPEGGTSG---AKCLKSERTEICCVRE  238 (241)
Q Consensus       213 ~~~~~~~~~~---~~~~~~~~~~~~~~~e  238 (241)
                      +.+..+....   ........+..|.+||
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~y~~pe  182 (267)
T cd06628         154 KKLEANSLSTKTNGARPSLQGSVFWMAPE  182 (267)
T ss_pred             cccccccccCCccccccccCCCcCccChh
Confidence            8876432211   1111222344577777

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=1.5e-26  Score=195.57  Aligned_cols=149  Identities=18%  Similarity=0.178  Sum_probs=133.3

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCc---chhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEe
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRD---GHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFE  137 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  137 (241)
                      +|...+.||+|++|.||+|.+  ++..+|+|.+......   ..+.+..|+.++..++||||+++++.+......+++||
T Consensus         2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   81 (316)
T cd05574           2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMD   81 (316)
T ss_pred             ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEE
Confidence            577889999999999999998  6899999998765322   34568899999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCC
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE  217 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~  217 (241)
                      |+.+++|.+++...   ....+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.++|+|||++.....
T Consensus        82 ~~~~~~L~~~~~~~---~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~  155 (316)
T cd05574          82 YCPGGELFRLLQRQ---PGKCLSEEVARFYAAEVLLALEYLH---LLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDV  155 (316)
T ss_pred             ecCCCCHHHHHHhC---CCCccCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChHHeEEcCCCCEEEeecchhhcccc
Confidence            99999999998654   2356899999999999999999999   99999999999999999999999999999987644

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.94  E-value=9.3e-27  Score=199.39  Aligned_cols=175  Identities=17%  Similarity=0.244  Sum_probs=136.9

Q ss_pred             hcCCCcCCeeecccceEEEEEEE-------CCeEEEEEEeeccCC-cchhhHHHHHHHHHhc-CCCceeeEeeEEecC-C
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW-------QERLISVMRFRESNR-DGHGSCINNIVYAAQM-SHDHILKLIGCCLET-P  130 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~-~  130 (241)
                      .++|...+.||.|+||.||+|.+       +++.||||.+..... .....+.+|+.++..+ +||||+++++++... .
T Consensus         6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~   85 (343)
T cd05103           6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG   85 (343)
T ss_pred             hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence            35688899999999999999974       467899999875432 2345688999999999 789999999988654 4


Q ss_pred             cceEEEeeCCCCCHHHHHhhcCCC--------------------------------------------------------
Q 026214          131 IPILAFESVEYGNLRDRILSASQP--------------------------------------------------------  154 (241)
Q Consensus       131 ~~~lv~e~~~~gsL~~~l~~~~~~--------------------------------------------------------  154 (241)
                      ..+++|||+++|+|.+++......                                                        
T Consensus        86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (343)
T cd05103          86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE  165 (343)
T ss_pred             ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence            678999999999999998653110                                                        


Q ss_pred             ------CCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCccccceeec
Q 026214          155 ------QTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKCLKS  228 (241)
Q Consensus       155 ------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~  228 (241)
                            ....+++..+..++.|++.||.|||   +.+++||||||+|||++.++.++|+|||++..+..+..... ....
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~-~~~~  241 (343)
T cd05103         166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVR-KGDA  241 (343)
T ss_pred             hhhhhhhhccCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhh-cCCC
Confidence                  0124678888999999999999999   99999999999999999999999999999987643322111 1112


Q ss_pred             CCceeeeecCC
Q 026214          229 ERTEICCVREN  239 (241)
Q Consensus       229 ~~~~~~~~~e~  239 (241)
                      ..+..|++||.
T Consensus       242 ~~~~~y~aPE~  252 (343)
T cd05103         242 RLPLKWMAPET  252 (343)
T ss_pred             CCCcceECcHH
Confidence            23345788873

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.94  E-value=2.2e-26  Score=191.72  Aligned_cols=165  Identities=20%  Similarity=0.238  Sum_probs=131.9

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCc--chhhHHHHHHHHHhc---CCCceeeEeeEEecC-----C
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRD--GHGSCINNIVYAAQM---SHDHILKLIGCCLET-----P  130 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~-----~  130 (241)
                      +|...+.||+|+||.||+|.+  ++..||+|.+......  ....+.+|+.++..+   +||||+++++++...     .
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~   80 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET   80 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence            367788999999999999998  7899999998754211  234566777777665   799999999988642     3


Q ss_pred             cceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEcccc
Q 026214          131 IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFS  210 (241)
Q Consensus       131 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG  210 (241)
                      ..++++||++ ++|.+++...   ....+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.+||+|||
T Consensus        81 ~~~lv~e~~~-~~l~~~~~~~---~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~kl~dfg  153 (288)
T cd07863          81 KVTLVFEHVD-QDLRTYLDKV---PPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGQVKLADFG  153 (288)
T ss_pred             eEEEEEcccc-cCHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECccC
Confidence            5789999998 5999988654   2345899999999999999999999   9999999999999999999999999999


Q ss_pred             CceecCCCCccccceeecCCceeeeecC
Q 026214          211 LSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       211 ~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ++..+........    ..++..|++||
T Consensus       154 ~~~~~~~~~~~~~----~~~~~~y~aPE  177 (288)
T cd07863         154 LARIYSCQMALTP----VVVTLWYRAPE  177 (288)
T ss_pred             ccccccCcccCCC----ccccccccCch
Confidence            9987754322111    12345678887

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.94  E-value=1.8e-26  Score=189.55  Aligned_cols=168  Identities=20%  Similarity=0.240  Sum_probs=142.4

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCc--chhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRD--GHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      +|...+.||+|++|.||+|.+  ++..|++|.+......  ....+.+|+.+++.++|+||+++++++...+..++++||
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY   80 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence            367788999999999999998  7889999998765432  457789999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      +++++|.+++...     ..+++..+..++.+++.||.|||   +.+++|+||+|+||+++.++.++|+|||++.....+
T Consensus        81 ~~~~~L~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~  152 (264)
T cd06626          81 CSGGTLEELLEHG-----RILDEHVIRVYTLQLLEGLAYLH---SHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNN  152 (264)
T ss_pred             CCCCcHHHHHhhc-----CCCChHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEcccccccccCCC
Confidence            9999999999553     34788899999999999999999   999999999999999999999999999999887655


Q ss_pred             Cccccc-eeecCCceeeeecC
Q 026214          219 GTSGAK-CLKSERTEICCVRE  238 (241)
Q Consensus       219 ~~~~~~-~~~~~~~~~~~~~e  238 (241)
                      ...... ......+..|++||
T Consensus       153 ~~~~~~~~~~~~~~~~~~~PE  173 (264)
T cd06626         153 TTTMGEEVQSLAGTPAYMAPE  173 (264)
T ss_pred             CCcccccccCCcCCcCccChh
Confidence            433222 22233455677777

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.94  E-value=1.6e-26  Score=189.26  Aligned_cols=146  Identities=20%  Similarity=0.326  Sum_probs=129.4

Q ss_pred             cCCCcCCeeecccceEEEEEEECCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCCC
Q 026214           62 NNYDQKNVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEY  141 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~  141 (241)
                      +.|...+.||.|+||.||++..++..||+|.+....  ....+.+|+.++..++|||++++++++... ..+++|||+++
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~~   82 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGEYTGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMSK   82 (254)
T ss_pred             HHceeeeeeccCCCCceEecccCCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCCC
Confidence            447788999999999999999889999999986543  346789999999999999999999998754 57999999999


Q ss_pred             CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          142 GNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       142 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ++|.+++...   ....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++....
T Consensus        83 ~~L~~~l~~~---~~~~~~~~~~~~~~~qi~~al~~lH---~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~  151 (254)
T cd05083          83 GNLVNFLRTR---GRALVSVIQLLQFSLDVAEGMEYLE---SKKLVHRDLAARNILVSEDGVAKVSDFGLARVGS  151 (254)
T ss_pred             CCHHHHHHhc---CcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEcCCCcEEECCCccceecc
Confidence            9999999765   2345889999999999999999999   9999999999999999999999999999998654

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.94  E-value=1.5e-26  Score=190.25  Aligned_cols=169  Identities=15%  Similarity=0.211  Sum_probs=139.1

Q ss_pred             HhcCCCcCCeeecccceEEEEEEE-CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           60 ATNNYDQKNVITEDWGCILYKGFW-QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      ....|...++||+|+||.||++.+ .+..+++|.+.... .....+.+|+.+++.++|+||+++.+++.. ...+++|||
T Consensus         4 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~   81 (260)
T cd05073           4 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEF   81 (260)
T ss_pred             cccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEe
Confidence            345688889999999999999988 66779999877543 234678999999999999999999999887 778999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      +++++|.+++...   ....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++..+...
T Consensus        82 ~~~~~L~~~~~~~---~~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~  155 (260)
T cd05073          82 MAKGSLLDFLKSD---EGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDN  155 (260)
T ss_pred             CCCCcHHHHHHhC---CccccCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCCcceeeccCC
Confidence            9999999999764   2345788899999999999999999   899999999999999999999999999999877543


Q ss_pred             CccccceeecCCceeeeecC
Q 026214          219 GTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ......  ....+..|.+||
T Consensus       156 ~~~~~~--~~~~~~~y~~PE  173 (260)
T cd05073         156 EYTARE--GAKFPIKWTAPE  173 (260)
T ss_pred             Cccccc--CCcccccccCHh
Confidence            322111  112234567777

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.94  E-value=2.1e-26  Score=188.37  Aligned_cols=167  Identities=23%  Similarity=0.317  Sum_probs=139.3

Q ss_pred             CeeecccceEEEEEEE--C---CeEEEEEEeeccCCcc-hhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCCC
Q 026214           68 NVITEDWGCILYKGFW--Q---ERLISVMRFRESNRDG-HGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEY  141 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~--~---~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~  141 (241)
                      +.||+|+||.||+|.+  .   +..|++|.+....... ...+.+|+..+..++|+|++++++++......+++|||+++
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG   80 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence            4689999999999999  3   7889999988654332 57789999999999999999999999999999999999999


Q ss_pred             CCHHHHHhhcCCC----CCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCC
Q 026214          142 GNLRDRILSASQP----QTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE  217 (241)
Q Consensus       142 gsL~~~l~~~~~~----~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~  217 (241)
                      ++|.+++......    ....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||.+.....
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~  157 (262)
T cd00192          81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLA---SKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD  157 (262)
T ss_pred             CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHH---cCCcccCccCcceEEECCCCcEEEccccccccccc
Confidence            9999999664110    0366899999999999999999999   99999999999999999999999999999998765


Q ss_pred             CCccccceeecCCceeeeecC
Q 026214          218 GGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ... .........+..|.+||
T Consensus       158 ~~~-~~~~~~~~~~~~y~aPE  177 (262)
T cd00192         158 DDY-YRKKTGGKLPIRWMAPE  177 (262)
T ss_pred             ccc-cccccCCCcCccccCHH
Confidence            542 11112233445677887

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=3.2e-28  Score=223.35  Aligned_cols=175  Identities=17%  Similarity=0.144  Sum_probs=153.4

Q ss_pred             HHHHHHHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeecc---CCcchhhHHHHHHHHHhcCCCceeeEeeEEec
Q 026214           54 AQELKLATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRES---NRDGHGSCINNIVYAAQMSHDHILKLIGCCLE  128 (241)
Q Consensus        54 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~  128 (241)
                      ..+++....+|.+.++||+|+||.|..+.+  ++..+|+|++.+.   ......-|..|-++|..-+.+.|+.++..|.+
T Consensus        67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD  146 (1317)
T KOG0612|consen   67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD  146 (1317)
T ss_pred             HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC
Confidence            355666778899999999999999999999  8899999999873   33455678889999999999999999999999


Q ss_pred             CCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEcc
Q 026214          129 TPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFD  208 (241)
Q Consensus       129 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~D  208 (241)
                      .+++|+|||||+||+|-.++.+.     ..+++..+..++..|+.||.-||   +.|+|||||||+|||||..|++|++|
T Consensus       147 ~~~LYlVMdY~pGGDlltLlSk~-----~~~pE~~ArFY~aEiVlAldslH---~mgyVHRDiKPDNvLld~~GHikLAD  218 (1317)
T KOG0612|consen  147 ERYLYLVMDYMPGGDLLTLLSKF-----DRLPEDWARFYTAEIVLALDSLH---SMGYVHRDIKPDNVLLDKSGHIKLAD  218 (1317)
T ss_pred             ccceEEEEecccCchHHHHHhhc-----CCChHHHHHHHHHHHHHHHHHHH---hccceeccCCcceeEecccCcEeecc
Confidence            99999999999999999999665     36999999999999999999999   99999999999999999999999999


Q ss_pred             ccCceecCCCCccccceeecCCceeeeecC
Q 026214          209 FSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       209 fG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ||.|-.+..+++-.....+|++  =|..||
T Consensus       219 FGsClkm~~dG~V~s~~aVGTP--DYISPE  246 (1317)
T KOG0612|consen  219 FGSCLKMDADGTVRSSVAVGTP--DYISPE  246 (1317)
T ss_pred             chhHHhcCCCCcEEeccccCCC--CccCHH
Confidence            9999999988876655555543  355554

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.94  E-value=1e-26  Score=193.69  Aligned_cols=166  Identities=15%  Similarity=0.172  Sum_probs=138.0

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeC
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESV  139 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  139 (241)
                      +|...+.||+|+||.||++.+  ++..||+|.+.... ......+.+|+.++++++||||+++++++...+..++++||+
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   81 (286)
T cd06622           2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM   81 (286)
T ss_pred             hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence            466788999999999999998  78999999886542 223467889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCC-CCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          140 EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFP-RPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       140 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~-~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      ++++|.+++....  ....+++..+..++.|++.||.|||   . .+++|+||+|+||+++.++.++|+|||++..+...
T Consensus        82 ~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH---~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~  156 (286)
T cd06622          82 DAGSLDKLYAGGV--ATEGIPEDVLRRITYAVVKGLKFLK---EEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS  156 (286)
T ss_pred             CCCCHHHHHHhcc--ccCCCCHHHHHHHHHHHHHHHHHHH---hcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC
Confidence            9999999886531  1346899999999999999999999   5 59999999999999999999999999999876433


Q ss_pred             CccccceeecCCceeeeecC
Q 026214          219 GTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ....     ...+..|++||
T Consensus       157 ~~~~-----~~~~~~y~aPE  171 (286)
T cd06622         157 LAKT-----NIGCQSYMAPE  171 (286)
T ss_pred             cccc-----CCCccCccCcc
Confidence            2211     12333566776

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.94  E-value=1.1e-26  Score=200.46  Aligned_cols=164  Identities=16%  Similarity=0.195  Sum_probs=135.1

Q ss_pred             HhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEecC------
Q 026214           60 ATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLET------  129 (241)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------  129 (241)
                      ..++|...+.||+|+||.||++.+  ++..||||++....  ......+.+|+.+++.++||||+++++++...      
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~  101 (364)
T cd07875          22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF  101 (364)
T ss_pred             hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence            456799999999999999999998  78899999987532  23346788999999999999999999987543      


Q ss_pred             CcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccc
Q 026214          130 PIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDF  209 (241)
Q Consensus       130 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~Df  209 (241)
                      ...++||||++ ++|.+.+..       .+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+||
T Consensus       102 ~~~~lv~e~~~-~~l~~~~~~-------~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Df  170 (364)
T cd07875         102 QDVYIVMELMD-ANLCQVIQM-------ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDF  170 (364)
T ss_pred             CeEEEEEeCCC-CCHHHHHHh-------cCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEECCCCcEEEEeC
Confidence            35799999997 588887733       3788899999999999999999   999999999999999999999999999


Q ss_pred             cCceecCCCCccccceeecCCceeeeecC
Q 026214          210 SLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       210 G~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |+++.........    ....+..|+|||
T Consensus       171 G~a~~~~~~~~~~----~~~~t~~y~aPE  195 (364)
T cd07875         171 GLARTAGTSFMMT----PYVVTRYYRAPE  195 (364)
T ss_pred             CCccccCCCCccc----CCcccCCcCCHH
Confidence            9998765432211    123445677887

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.94  E-value=1.8e-26  Score=190.75  Aligned_cols=167  Identities=22%  Similarity=0.277  Sum_probs=136.6

Q ss_pred             cCCCcCCeeecccceEEEEEEE-C----CeEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW-Q----ERLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA  135 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~-~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  135 (241)
                      .+|...++||+|+||.||+|.+ +    ...|++|...... ....+.+.+|+.+++.++||||+++++++.. +..+++
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv   84 (270)
T cd05056           6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV   84 (270)
T ss_pred             hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence            4477789999999999999987 2    2468999876544 2345678999999999999999999998875 557899


Q ss_pred             EeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceec
Q 026214          136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI  215 (241)
Q Consensus       136 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~  215 (241)
                      |||+++++|.+++...    ...+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++++|||++...
T Consensus        85 ~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~  157 (270)
T cd05056          85 MELAPLGELRSYLQVN----KYSLDLASLILYSYQLSTALAYLE---SKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYL  157 (270)
T ss_pred             EEcCCCCcHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccChheEEEecCCCeEEccCceeeec
Confidence            9999999999999654    235899999999999999999999   999999999999999999999999999999877


Q ss_pred             CCCCccccceeecCCceeeeecC
Q 026214          216 PEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .........  .+..+..|++||
T Consensus       158 ~~~~~~~~~--~~~~~~~y~aPE  178 (270)
T cd05056         158 EDESYYKAS--KGKLPIKWMAPE  178 (270)
T ss_pred             ccccceecC--CCCccccccChh
Confidence            554322211  222334577887

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.94  E-value=9.1e-27  Score=191.91  Aligned_cols=170  Identities=19%  Similarity=0.243  Sum_probs=140.6

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC---cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR---DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      ++|...+.||.|++|.||++.+  ++..+++|.+.....   .....+.+|+.+++.++||||+++++++..++..++++
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL   81 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence            4577788999999999999997  889999998765321   23357889999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||+++++|.+++..... ....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++..+.
T Consensus        82 e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~  157 (267)
T cd08229          82 ELADAGDLSRMIKHFKK-QKRLIPEKTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS  157 (267)
T ss_pred             EecCCCCHHHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEECcchhhhccc
Confidence            99999999999865321 2456899999999999999999999   9999999999999999999999999999998765


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ......   .....+..|.+||
T Consensus       158 ~~~~~~---~~~~~~~~~~ape  176 (267)
T cd08229         158 SKTTAA---HSLVGTPYYMSPE  176 (267)
T ss_pred             cCCccc---ccccCCcCccCHH
Confidence            433211   1122344567776

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.94  E-value=1.6e-26  Score=193.16  Aligned_cols=179  Identities=18%  Similarity=0.155  Sum_probs=145.5

Q ss_pred             cCHHHHHHHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhc-CCCceeeEeeEEec
Q 026214           52 FSAQELKLATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQM-SHDHILKLIGCCLE  128 (241)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~  128 (241)
                      +...++..++++|.....||+|+||.||++..  ++..+|+|.+.... .....+.+|+.++.++ +|||++++++++..
T Consensus        12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~   90 (291)
T cd06639          12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYK   90 (291)
T ss_pred             hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence            44566677889999999999999999999998  78899999886543 2345678899999999 89999999999875


Q ss_pred             C-----CcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCc
Q 026214          129 T-----PIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENV  203 (241)
Q Consensus       129 ~-----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~  203 (241)
                      .     +..++++||+++++|.+++..... ....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.
T Consensus        91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~nili~~~~~  166 (291)
T cd06639          91 ADKLVGGQLWLVLELCNGGSVTELVKGLLI-CGQRLDEAMISYILYGALLGLQHLH---NNRIIHRDVKGNNILLTTEGG  166 (291)
T ss_pred             ccccCCCeeEEEEEECCCCcHHHHHHHhhh-cCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCCC
Confidence            4     358999999999999998864311 2346899999999999999999999   999999999999999999999


Q ss_pred             EEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          204 AKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       204 ~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ++|+|||++..+........   ....+..|++||
T Consensus       167 ~kl~dfg~~~~~~~~~~~~~---~~~~~~~y~aPE  198 (291)
T cd06639         167 VKLVDFGVSAQLTSTRLRRN---TSVGTPFWMAPE  198 (291)
T ss_pred             EEEeecccchhccccccccc---CccCCccccChh
Confidence            99999999987654322111   112345577887

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.94  E-value=1.7e-26  Score=190.21  Aligned_cols=169  Identities=17%  Similarity=0.194  Sum_probs=140.0

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC------cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceE
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR------DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPIL  134 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  134 (241)
                      +|...+.||+|++|.||++.+  ++..||+|.+.....      .....+.+|+.++++++||||+++++++.+.+..++
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   80 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL   80 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence            477889999999999999998  889999999875321      124568899999999999999999999999999999


Q ss_pred             EEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCC-cEEEccccCce
Q 026214          135 AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEEN-VAKMFDFSLSI  213 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~-~~ki~DfG~a~  213 (241)
                      ++||+++++|.+++...     .++++..+..++.|++.||.|||   +.+++|+||+|+||+++.++ .++|+|||++.
T Consensus        81 v~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~ql~~al~~LH---~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~  152 (268)
T cd06630          81 FVEWMAGGSVSHLLSKY-----GAFKEAVIINYTEQLLRGLSYLH---ENQIIHRDVKGANLLIDSTGQRLRIADFGAAA  152 (268)
T ss_pred             EEeccCCCcHHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEccccccc
Confidence            99999999999999654     35889999999999999999999   99999999999999998765 69999999998


Q ss_pred             ecCCCCccccc-eeecCCceeeeecCC
Q 026214          214 SIPEGGTSGAK-CLKSERTEICCVREN  239 (241)
Q Consensus       214 ~~~~~~~~~~~-~~~~~~~~~~~~~e~  239 (241)
                      .+......... ......+..|.+||.
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~PE~  179 (268)
T cd06630         153 RLAAKGTGAGEFQGQLLGTIAFMAPEV  179 (268)
T ss_pred             ccccccccCCccccccccccceeCHhH
Confidence            87655322111 112234456788873

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.94  E-value=2.2e-26  Score=191.37  Aligned_cols=173  Identities=21%  Similarity=0.226  Sum_probs=140.0

Q ss_pred             cCCCcCCeeecccceEEEEEEE-------CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW-------QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPIL  134 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  134 (241)
                      .+|+...+||+|+||.||++..       ++..+++|.+..........+.+|+.++..++||||+++++++...+..++
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (280)
T cd05092           5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM   84 (280)
T ss_pred             HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence            3466788999999999999964       456789998876554455779999999999999999999999999999999


Q ss_pred             EEeeCCCCCHHHHHhhcCC----------CCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcE
Q 026214          135 AFESVEYGNLRDRILSASQ----------PQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVA  204 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~~~----------~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~  204 (241)
                      +|||+++++|.+++.....          .....+++..+..++.|++.||.|||   +.+++|+||||+||++++++.+
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~nil~~~~~~~  161 (280)
T cd05092          85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLA---SLHFVHRDLATRNCLVGQGLVV  161 (280)
T ss_pred             EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHH---HCCeecccccHhhEEEcCCCCE
Confidence            9999999999999976421          01135789999999999999999999   9999999999999999999999


Q ss_pred             EEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          205 KMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       205 ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +|+|||++..+........ ......+..|++||
T Consensus       162 kL~dfg~~~~~~~~~~~~~-~~~~~~~~~y~aPE  194 (280)
T cd05092         162 KIGDFGMSRDIYSTDYYRV-GGRTMLPIRWMPPE  194 (280)
T ss_pred             EECCCCceeEcCCCceeec-CCCccccccccCHH
Confidence            9999999987654332111 11111234577887

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.94  E-value=2e-26  Score=194.79  Aligned_cols=175  Identities=19%  Similarity=0.255  Sum_probs=139.8

Q ss_pred             HhcCCCcCCeeecccceEEEEEEE---------CCeEEEEEEeeccC-CcchhhHHHHHHHHHhc-CCCceeeEeeEEec
Q 026214           60 ATNNYDQKNVITEDWGCILYKGFW---------QERLISVMRFRESN-RDGHGSCINNIVYAAQM-SHDHILKLIGCCLE  128 (241)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~---------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~  128 (241)
                      ...+|...+.||+|+||.||++..         ....+|+|.+.... ......+.+|+.++..+ +||||+++++++..
T Consensus        10 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~   89 (314)
T cd05099          10 PRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQ   89 (314)
T ss_pred             cHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEcc
Confidence            345678889999999999999975         23568999887542 22345688999999999 69999999999999


Q ss_pred             CCcceEEEeeCCCCCHHHHHhhcCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCee
Q 026214          129 TPIPILAFESVEYGNLRDRILSASQ-----------PQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHIL  197 (241)
Q Consensus       129 ~~~~~lv~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nil  197 (241)
                      .+..+++|||+++|+|.+++.....           .....+++..+..++.|++.||.|||   +.+++|+||||+||+
T Consensus        90 ~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dlkp~Nil  166 (314)
T cd05099          90 EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLE---SRRCIHRDLAARNVL  166 (314)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeeccccceeEE
Confidence            8999999999999999999976421           11245889999999999999999999   999999999999999


Q ss_pred             EcCCCcEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          198 FNEENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       198 l~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ++.++.+||+|||+++.+........ ...+..+..|++||
T Consensus       167 l~~~~~~kL~Dfg~~~~~~~~~~~~~-~~~~~~~~~y~aPE  206 (314)
T cd05099         167 VTEDNVMKIADFGLARGVHDIDYYKK-TSNGRLPVKWMAPE  206 (314)
T ss_pred             EcCCCcEEEccccccccccccccccc-cccCCCCccccCHH
Confidence            99999999999999987654322111 11223334578887

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.94  E-value=2.2e-26  Score=193.90  Aligned_cols=174  Identities=18%  Similarity=0.232  Sum_probs=140.0

Q ss_pred             hcCCCcCCeeecccceEEEEEEEC---------CeEEEEEEeeccC-CcchhhHHHHHHHHHhc-CCCceeeEeeEEecC
Q 026214           61 TNNYDQKNVITEDWGCILYKGFWQ---------ERLISVMRFRESN-RDGHGSCINNIVYAAQM-SHDHILKLIGCCLET  129 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~~---------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~  129 (241)
                      .+.|...+.||+|+||.||++.+.         ...+|+|.+.... ......+.+|+.++..+ +||||+++++++...
T Consensus        17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~   96 (307)
T cd05098          17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD   96 (307)
T ss_pred             hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence            456888999999999999999861         2469999987542 23345688899999999 899999999999999


Q ss_pred             CcceEEEeeCCCCCHHHHHhhcCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeE
Q 026214          130 PIPILAFESVEYGNLRDRILSASQ-----------PQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILF  198 (241)
Q Consensus       130 ~~~~lv~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill  198 (241)
                      +..+++|||+++++|.+++.....           .....+++..++.++.|++.||.|||   +.+++|+||||+||++
T Consensus        97 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dlkp~Nill  173 (307)
T cd05098          97 GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLV  173 (307)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH---HCCcccccccHHheEE
Confidence            999999999999999999976421           01235889999999999999999999   9999999999999999


Q ss_pred             cCCCcEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          199 NEENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       199 ~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +.++.++|+|||++..+........ ...+..+..|++||
T Consensus       174 ~~~~~~kL~dfg~a~~~~~~~~~~~-~~~~~~~~~y~aPE  212 (307)
T cd05098         174 TEDNVMKIADFGLARDIHHIDYYKK-TTNGRLPVKWMAPE  212 (307)
T ss_pred             cCCCcEEECCCcccccccccchhhc-cccCCCccceeChH
Confidence            9999999999999987653321111 11222334678887

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.94  E-value=3.5e-26  Score=187.13  Aligned_cols=163  Identities=19%  Similarity=0.224  Sum_probs=137.7

Q ss_pred             CCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC-----cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           64 YDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR-----DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        64 ~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      |...+.||+|++|.||+|..  ++..|++|.+.....     ...+.+.+|+.+++.++||||+++++++......++++
T Consensus         2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~   81 (258)
T cd06632           2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFL   81 (258)
T ss_pred             ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEE
Confidence            66778999999999999998  789999998865431     23467889999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||+++++|.+++...     ..+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.+||+|||++....
T Consensus        82 e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~  153 (258)
T cd06632          82 ELVPGGSLAKLLKKY-----GSFPEPVIRLYTRQILLGLEYLH---DRNTVHRDIKGANILVDTNGVVKLADFGMAKQVV  153 (258)
T ss_pred             EecCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccceecc
Confidence            999999999999654     34889999999999999999999   9999999999999999999999999999998765


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .....    .....+..|++||
T Consensus       154 ~~~~~----~~~~~~~~y~~pe  171 (258)
T cd06632         154 EFSFA----KSFKGSPYWMAPE  171 (258)
T ss_pred             ccccc----cccCCCcceeCHH
Confidence            44311    1122334567776

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.94  E-value=4.2e-26  Score=186.53  Aligned_cols=166  Identities=22%  Similarity=0.310  Sum_probs=139.1

Q ss_pred             CcCCeeecccceEEEEEEE--CC----eEEEEEEeeccCCc-chhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEe
Q 026214           65 DQKNVITEDWGCILYKGFW--QE----RLISVMRFRESNRD-GHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFE  137 (241)
Q Consensus        65 ~~~~~lg~G~~g~Vy~~~~--~~----~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  137 (241)
                      ...+.||.|+||.||++.+  .+    ..||+|.+...... ..+.+..|+.++..++||||+++++++...+..+++||
T Consensus         2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e   81 (258)
T smart00219        2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME   81 (258)
T ss_pred             cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence            4567899999999999999  33    88999998765433 45788999999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCC
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE  217 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~  217 (241)
                      |+++++|.+++...   ....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++++|||++.....
T Consensus        82 ~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~ql~~~l~~lh---~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~  155 (258)
T smart00219       82 YMEGGDLLDYLRKN---RPKELSLSDLLSFALQIARGMEYLE---SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYD  155 (258)
T ss_pred             ccCCCCHHHHHHhh---hhccCCHHHHHHHHHHHHHHHHHHh---cCCeeecccccceEEEccCCeEEEcccCCceeccc
Confidence            99999999999664   1222899999999999999999999   99999999999999999999999999999988765


Q ss_pred             CCccccceeecCCceeeeecC
Q 026214          218 GGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .......  .+..+..|.+||
T Consensus       156 ~~~~~~~--~~~~~~~y~~Pe  174 (258)
T smart00219      156 DDYYKKK--GGKLPIRWMAPE  174 (258)
T ss_pred             ccccccc--cCCCcccccChH
Confidence            5332221  222445567776

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.94  E-value=3.3e-26  Score=189.17  Aligned_cols=144  Identities=16%  Similarity=0.237  Sum_probs=121.1

Q ss_pred             CeeecccceEEEEEEE-CC---eEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCCCC
Q 026214           68 NVITEDWGCILYKGFW-QE---RLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYG  142 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~-~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g  142 (241)
                      +.||+|+||.||++.. ++   ..+++|.+.... ......+.+|+.+++.++||||+++++.+......+++|||+++|
T Consensus         1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~   80 (268)
T cd05086           1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG   80 (268)
T ss_pred             CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence            3689999999999976 33   345666665433 233567899999999999999999999999999999999999999


Q ss_pred             CHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceec
Q 026214          143 NLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI  215 (241)
Q Consensus       143 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~  215 (241)
                      +|.+++..... .....++..+..++.|++.||.|||   +.+++|+||||+|||++.++.++|+|||++...
T Consensus        81 ~L~~~l~~~~~-~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~  149 (268)
T cd05086          81 DLKSYLSQEQW-HRRNSQLLLLQRMACEIAAGVTHMH---KHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSR  149 (268)
T ss_pred             cHHHHHHhhhc-ccccccHHHHHHHHHHHHHHHHHHH---HCCeeccCCccceEEEcCCccEEeccccccccc
Confidence            99999976422 1334677778899999999999999   999999999999999999999999999998643

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.94  E-value=1.9e-26  Score=190.96  Aligned_cols=174  Identities=17%  Similarity=0.243  Sum_probs=139.3

Q ss_pred             hcCCCcCCeeecccceEEEEEEEC-------CeEEEEEEeeccCC-cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcc
Q 026214           61 TNNYDQKNVITEDWGCILYKGFWQ-------ERLISVMRFRESNR-DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIP  132 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~~-------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  132 (241)
                      .++|...+.||+|+||.||+|.+.       +..||+|.+..... .....+.+|+.++..++||||+++++++......
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~   84 (277)
T cd05032           5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT   84 (277)
T ss_pred             hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence            356778899999999999999872       26799999865432 2345688999999999999999999999999999


Q ss_pred             eEEEeeCCCCCHHHHHhhcCCC-----CCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEc
Q 026214          133 ILAFESVEYGNLRDRILSASQP-----QTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMF  207 (241)
Q Consensus       133 ~lv~e~~~~gsL~~~l~~~~~~-----~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~  207 (241)
                      +++|||+++++|.+++......     ....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+
T Consensus        85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~di~p~nill~~~~~~kl~  161 (277)
T cd05032          85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLA---AKKFVHRDLAARNCMVAEDLTVKIG  161 (277)
T ss_pred             EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccChheEEEcCCCCEEEC
Confidence            9999999999999999754211     1234788899999999999999999   9999999999999999999999999


Q ss_pred             cccCceecCCCCccccceeecCCceeeeecC
Q 026214          208 DFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       208 DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |||+++.+........ ......+..|.+||
T Consensus       162 dfg~~~~~~~~~~~~~-~~~~~~~~~y~aPE  191 (277)
T cd05032         162 DFGMTRDIYETDYYRK-GGKGLLPVRWMAPE  191 (277)
T ss_pred             CcccchhhccCccccc-CCCCCccccccCHH
Confidence            9999987654322110 01112234577777

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.94  E-value=2.3e-26  Score=212.31  Aligned_cols=149  Identities=19%  Similarity=0.169  Sum_probs=132.7

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC---cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR---DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      ++|...++||+|+||.||+|.+  ++..||+|++.....   .....+..|+.++..++||||+++++++...+..++||
T Consensus         4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm   83 (669)
T cd05610           4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM   83 (669)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence            5688889999999999999999  689999999875432   12356888999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||+.+++|.+++...     ..+++..++.++.||+.||.|||   ..+|+||||||+|||++.++.++|+|||+++...
T Consensus        84 Ey~~g~~L~~li~~~-----~~l~~~~~~~i~~qil~aL~yLH---~~gIiHrDLKP~NILl~~~g~vkL~DFGls~~~~  155 (669)
T cd05610          84 EYLIGGDVKSLLHIY-----GYFDEEMAVKYISEVALALDYLH---RHGIIHRDLKPDNMLISNEGHIKLTDFGLSKVTL  155 (669)
T ss_pred             eCCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCccHHHEEEcCCCCEEEEeCCCCcccc
Confidence            999999999999553     35888999999999999999999   8999999999999999999999999999998765


Q ss_pred             CC
Q 026214          217 EG  218 (241)
Q Consensus       217 ~~  218 (241)
                      ..
T Consensus       156 ~~  157 (669)
T cd05610         156 NR  157 (669)
T ss_pred             CC
Confidence            43

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.94  E-value=7.1e-27  Score=195.76  Aligned_cols=163  Identities=18%  Similarity=0.235  Sum_probs=137.3

Q ss_pred             CCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCCC
Q 026214           64 YDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEY  141 (241)
Q Consensus        64 ~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~  141 (241)
                      |.....||.|+||.||++.+  ++..||+|.+........+.+.+|+.++..++||||+++++.+...+..+++|||+++
T Consensus        24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~  103 (292)
T cd06658          24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEG  103 (292)
T ss_pred             HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCC
Confidence            33446799999999999998  7889999998765544566789999999999999999999999999999999999999


Q ss_pred             CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCcc
Q 026214          142 GNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTS  221 (241)
Q Consensus       142 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~  221 (241)
                      ++|.+++..      ..+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++..+......
T Consensus       104 ~~L~~~~~~------~~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~  174 (292)
T cd06658         104 GALTDIVTH------TRMNEEQIATVCLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK  174 (292)
T ss_pred             CcHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEccCcchhhccccccc
Confidence            999998833      34788999999999999999999   999999999999999999999999999999866443322


Q ss_pred             ccceeecCCceeeeecC
Q 026214          222 GAKCLKSERTEICCVRE  238 (241)
Q Consensus       222 ~~~~~~~~~~~~~~~~e  238 (241)
                      ..   ....+..|++||
T Consensus       175 ~~---~~~~~~~y~aPE  188 (292)
T cd06658         175 RK---SLVGTPYWMAPE  188 (292)
T ss_pred             Cc---eeecCccccCHH
Confidence            11   122345678887

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=4e-26  Score=189.19  Aligned_cols=164  Identities=21%  Similarity=0.287  Sum_probs=138.8

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC-CcchhhHHHHHHHHHhcC---CCceeeEeeEEecCCcceEEE
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN-RDGHGSCINNIVYAAQMS---HDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv~  136 (241)
                      .|...+.||.|+||.||+|.+  ++..|++|.+.... ......+.+|+.+++.+.   |||++++++++......+++|
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~   81 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM   81 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence            467778999999999999998  78999999987542 234567889999999996   999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||+++++|.+++..      ..+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++..+.
T Consensus        82 e~~~~~~L~~~~~~------~~l~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~  152 (277)
T cd06917          82 EYAEGGSVRTLMKA------GPIAEKYISVIIREVLVALKYIH---KVGVIHRDIKAANILVTNTGNVKLCDFGVAALLN  152 (277)
T ss_pred             ecCCCCcHHHHHHc------cCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHHEEEcCCCCEEEccCCceeecC
Confidence            99999999998833      35889999999999999999999   9999999999999999999999999999998876


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .......   ...++..|++||
T Consensus       153 ~~~~~~~---~~~~~~~y~aPE  171 (277)
T cd06917         153 QNSSKRS---TFVGTPYWMAPE  171 (277)
T ss_pred             CCccccc---cccCCcceeCHH
Confidence            5542221   122344577787

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.94  E-value=4.7e-26  Score=187.57  Aligned_cols=168  Identities=20%  Similarity=0.253  Sum_probs=138.6

Q ss_pred             CCcCCeeecccceEEEEEEE-CCeEEEEEEeeccCCc------chhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           64 YDQKNVITEDWGCILYKGFW-QERLISVMRFRESNRD------GHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        64 ~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      |...+.||.|+||.||+|.. ++..+|+|.+......      ....+.+|+.+++.++|+||+++.+++.+.+..++++
T Consensus         2 ~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   81 (265)
T cd06631           2 WTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFM   81 (265)
T ss_pred             ccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEE
Confidence            66788999999999999988 8889999988653211      2345888999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||+++++|.+++...     ..+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++....
T Consensus        82 e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~  153 (265)
T cd06631          82 EFVPGGSISSILNRF-----GPLPEPVFCKYTKQILDGVAYLH---NNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLA  153 (265)
T ss_pred             ecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHhEEECCCCeEEeccchhhHhhh
Confidence            999999999999554     35789999999999999999999   9999999999999999999999999999998764


Q ss_pred             CCCcc---ccceeecCCceeeeecCC
Q 026214          217 EGGTS---GAKCLKSERTEICCVREN  239 (241)
Q Consensus       217 ~~~~~---~~~~~~~~~~~~~~~~e~  239 (241)
                      .....   .........+..|.+||-
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~pe~  179 (265)
T cd06631         154 WVGLHGTHSNMLKSMHGTPYWMAPEV  179 (265)
T ss_pred             hccccccccccccccCCCccccChhh
Confidence            32211   111122334556788873

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=4.3e-27  Score=201.47  Aligned_cols=158  Identities=22%  Similarity=0.287  Sum_probs=142.4

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCc--chhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRD--GHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      .+-|+.++-||+|-|++|-.+.+  +|..||||++.+....  ....++.|++.|+.++|||||+|+.+...+..+|||+
T Consensus        17 AGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiL   96 (864)
T KOG4717|consen   17 AGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLIL   96 (864)
T ss_pred             eeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEE
Confidence            35588889999999999999998  9999999999875433  3466899999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcC-CCcEEEccccCceec
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNE-ENVAKMFDFSLSISI  215 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~-~~~~ki~DfG~a~~~  215 (241)
                      |+=++|+|.+++.+.    ...+.+....+++.||+.|+.|+|   ...+|||||||+||.+.+ -|.+|++|||++..+
T Consensus        97 ELGD~GDl~DyImKH----e~Gl~E~La~kYF~QI~~AI~YCH---qLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf  169 (864)
T KOG4717|consen   97 ELGDGGDLFDYIMKH----EEGLNEDLAKKYFAQIVHAISYCH---QLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKF  169 (864)
T ss_pred             EecCCchHHHHHHhh----hccccHHHHHHHHHHHHHHHHHHh---hhhhhcccCCcceeEEeeecCceEeeeccccccC
Confidence            999999999999887    456999999999999999999999   999999999999998865 588999999999999


Q ss_pred             CCCCccccce
Q 026214          216 PEGGTSGAKC  225 (241)
Q Consensus       216 ~~~~~~~~~~  225 (241)
                      .++....+.|
T Consensus       170 ~PG~kL~TsC  179 (864)
T KOG4717|consen  170 QPGKKLTTSC  179 (864)
T ss_pred             CCcchhhccc
Confidence            9887776665

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.94  E-value=2.5e-26  Score=192.45  Aligned_cols=165  Identities=17%  Similarity=0.240  Sum_probs=140.2

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeC
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESV  139 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  139 (241)
                      ++|...+.||+|+||.||++..  ++..|++|.+..........+.+|+.+++.++||||+++++++...+..++|+||+
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~   98 (293)
T cd06647          19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL   98 (293)
T ss_pred             hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence            5788889999999999999987  77889999987554445567899999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCC
Q 026214          140 EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGG  219 (241)
Q Consensus       140 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~  219 (241)
                      ++++|.+++..      ..+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++.......
T Consensus        99 ~~~~L~~~~~~------~~l~~~~~~~i~~~l~~al~~LH---~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~  169 (293)
T cd06647          99 AGGSLTDVVTE------TCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ  169 (293)
T ss_pred             CCCcHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHH---hCCEeeccCCHHHEEEcCCCCEEEccCcceecccccc
Confidence            99999999944      34788899999999999999999   9999999999999999999999999999988765543


Q ss_pred             ccccceeecCCceeeeecC
Q 026214          220 TSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~e  238 (241)
                      ....   ....+..|++||
T Consensus       170 ~~~~---~~~~~~~y~~PE  185 (293)
T cd06647         170 SKRS---TMVGTPYWMAPE  185 (293)
T ss_pred             cccc---cccCChhhcCch
Confidence            2221   112334567776

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.94  E-value=5.8e-27  Score=211.14  Aligned_cols=153  Identities=20%  Similarity=0.276  Sum_probs=130.2

Q ss_pred             HHhcCCCcCCeeecccceEEEEEEE-CC-eEEEEEEeeccCCcchhhHHHHHHHHHhcC-CCceeeEeeE-Eec---C--
Q 026214           59 LATNNYDQKNVITEDWGCILYKGFW-QE-RLISVMRFRESNRDGHGSCINNIVYAAQMS-HDHILKLIGC-CLE---T--  129 (241)
Q Consensus        59 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~-~~~---~--  129 (241)
                      ....++...+.|.+|||+.||.|.+ .+ ..+|+|++-..+....+...+||++|++|. |+|||.+++. ...   .  
T Consensus        34 Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~  113 (738)
T KOG1989|consen   34 VGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNG  113 (738)
T ss_pred             ECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCc
Confidence            3445567788999999999999999 44 899999987777778899999999999995 9999999993 321   1  


Q ss_pred             -CcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEcc
Q 026214          130 -PIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFD  208 (241)
Q Consensus       130 -~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~D  208 (241)
                       -..+|.||||.+|+|-|++....   ...|++..+++|++|++.|+.+||.- ..+|||||||.+||||+.++..||||
T Consensus       114 ~~EvllLmEyC~gg~Lvd~mn~Rl---q~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCD  189 (738)
T KOG1989|consen  114 VWEVLLLMEYCKGGSLVDFMNTRL---QTRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCD  189 (738)
T ss_pred             eeEEEeehhhccCCcHHHHHHHHH---hccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCc
Confidence             25789999999999999997652   23399999999999999999999932 34599999999999999999999999


Q ss_pred             ccCceec
Q 026214          209 FSLSISI  215 (241)
Q Consensus       209 fG~a~~~  215 (241)
                      ||.|...
T Consensus       190 FGSatt~  196 (738)
T KOG1989|consen  190 FGSATTK  196 (738)
T ss_pred             ccccccc
Confidence            9998643

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.94  E-value=3.5e-26  Score=187.05  Aligned_cols=165  Identities=21%  Similarity=0.242  Sum_probs=141.8

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeC
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESV  139 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  139 (241)
                      ++|...+.||.|++|.||+|..  ++..+++|.+.....  ...+.+|+.+++.++||||+++++++......++++||+
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~   80 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC   80 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence            5688889999999999999998  578999999876542  678999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCC
Q 026214          140 EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGG  219 (241)
Q Consensus       140 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~  219 (241)
                      ++++|.+++...    ...+++..+..++.|++.||.|||   ..+++|+||+|+||+++.++.++|+|||++..+....
T Consensus        81 ~~~~L~~~l~~~----~~~l~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~  153 (256)
T cd06612          81 GAGSVSDIMKIT----NKTLTEEEIAAILYQTLKGLEYLH---SNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTM  153 (256)
T ss_pred             CCCcHHHHHHhC----ccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEECCCCcEEEcccccchhcccCc
Confidence            999999999654    356899999999999999999999   9999999999999999999999999999998776543


Q ss_pred             ccccceeecCCceeeeecC
Q 026214          220 TSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~e  238 (241)
                      ....   ....+..|.+||
T Consensus       154 ~~~~---~~~~~~~y~~PE  169 (256)
T cd06612         154 AKRN---TVIGTPFWMAPE  169 (256)
T ss_pred             cccc---cccCCccccCHH
Confidence            2111   122334567776

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.94  E-value=9.1e-27  Score=195.57  Aligned_cols=161  Identities=19%  Similarity=0.205  Sum_probs=136.6

Q ss_pred             cCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCCCCC
Q 026214           66 QKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGN  143 (241)
Q Consensus        66 ~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs  143 (241)
                      ....||.|+||.||++.+  ++..||+|.+..........+.+|+.++..++||||+++++++..++..++++||+++++
T Consensus        25 ~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~  104 (297)
T cd06659          25 NYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGA  104 (297)
T ss_pred             hhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCC
Confidence            345799999999999998  789999999876554455678899999999999999999999999999999999999999


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCcccc
Q 026214          144 LRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGA  223 (241)
Q Consensus       144 L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~~~  223 (241)
                      |.+++..      ..+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++..+..+.... 
T Consensus       105 L~~~~~~------~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~-  174 (297)
T cd06659         105 LTDIVSQ------TRLNEEQIATVCESVLQALCYLH---SQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKR-  174 (297)
T ss_pred             HHHHHhh------cCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccccc-
Confidence            9998733      34889999999999999999999   9999999999999999999999999999998665443221 


Q ss_pred             ceeecCCceeeeecC
Q 026214          224 KCLKSERTEICCVRE  238 (241)
Q Consensus       224 ~~~~~~~~~~~~~~e  238 (241)
                        .....+..|++||
T Consensus       175 --~~~~~~~~y~aPE  187 (297)
T cd06659         175 --KSLVGTPYWMAPE  187 (297)
T ss_pred             --cceecCccccCHH
Confidence              1222445677777

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.94  E-value=7.6e-28  Score=208.01  Aligned_cols=158  Identities=21%  Similarity=0.323  Sum_probs=135.4

Q ss_pred             cCCCcCCeeecccceEEEEEEECCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCCC
Q 026214           62 NNYDQKNVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEY  141 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~  141 (241)
                      ......+-||.|+.|.||.|.+.++.||||++...+       ..+|.-|++|+||||+.|.|+|.+...+++|||||..
T Consensus       124 e~IsELeWlGSGaQGAVF~Grl~netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~  196 (904)
T KOG4721|consen  124 EEISELEWLGSGAQGAVFLGRLHNETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQ  196 (904)
T ss_pred             HHhhhhhhhccCcccceeeeeccCceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEEeeecccc
Confidence            334456789999999999999999999999887654       2468889999999999999999999999999999999


Q ss_pred             CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCcc
Q 026214          142 GNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTS  221 (241)
Q Consensus       142 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~  221 (241)
                      |-|+..|...     .++.......|..+|+.|+.|||   ...|||||||+-||||+.+-.+||+|||-++.+..-.+.
T Consensus       197 GqL~~VLka~-----~~itp~llv~Wsk~IA~GM~YLH---~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STk  268 (904)
T KOG4721|consen  197 GQLYEVLKAG-----RPITPSLLVDWSKGIAGGMNYLH---LHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTK  268 (904)
T ss_pred             ccHHHHHhcc-----CccCHHHHHHHHHHhhhhhHHHH---HhhHhhhccCCCceEeeccceEEeccccchHhhhhhhhh
Confidence            9999999654     56889999999999999999999   999999999999999999999999999999877655332


Q ss_pred             ccceeecCCceeeeecC
Q 026214          222 GAKCLKSERTEICCVRE  238 (241)
Q Consensus       222 ~~~~~~~~~~~~~~~~e  238 (241)
                      -    --.++-.|+|||
T Consensus       269 M----SFaGTVaWMAPE  281 (904)
T KOG4721|consen  269 M----SFAGTVAWMAPE  281 (904)
T ss_pred             h----hhhhhHhhhCHH
Confidence            2    222444567776

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.94  E-value=3.3e-26  Score=194.59  Aligned_cols=143  Identities=15%  Similarity=0.144  Sum_probs=125.2

Q ss_pred             CCeeecc--cceEEEEEEE--CCeEEEEEEeeccCC--cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCC
Q 026214           67 KNVITED--WGCILYKGFW--QERLISVMRFRESNR--DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVE  140 (241)
Q Consensus        67 ~~~lg~G--~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~  140 (241)
                      ..+||+|  +|++||++.+  ++..||+|++.....  .....+.+|+.+++.++||||+++++++..++..++||||++
T Consensus         3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~   82 (327)
T cd08227           3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA   82 (327)
T ss_pred             hhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccC
Confidence            4688999  6789999998  889999999875432  223567789999999999999999999999999999999999


Q ss_pred             CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceec
Q 026214          141 YGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI  215 (241)
Q Consensus       141 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~  215 (241)
                      +++|.+++...   ....+++..+..++.|++.||.|||   +.+++||||||+|||++.++.++++||+.+...
T Consensus        83 ~~~l~~~~~~~---~~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~  151 (327)
T cd08227          83 YGSAKDLICTH---FMDGMSELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSM  151 (327)
T ss_pred             CCcHHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCChhhEEEecCCcEEEcccchhhcc
Confidence            99999999654   2345899999999999999999999   999999999999999999999999999876544

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.94  E-value=1.4e-26  Score=201.64  Aligned_cols=163  Identities=21%  Similarity=0.223  Sum_probs=136.3

Q ss_pred             hcCCCcCCeeecccceEEEEEEE----CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW----QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      ...|.....||.|+||.||++..    ++..|++|.+...     ..+.+|+.+++.++||||+++++++......+++|
T Consensus        91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~  165 (392)
T PHA03207         91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM  165 (392)
T ss_pred             cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence            45688999999999999999976    4578999987643     23568999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      |++. ++|.+++..     ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.++|+|||++..+.
T Consensus       166 e~~~-~~l~~~l~~-----~~~l~~~~~~~i~~ql~~aL~~LH---~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~  236 (392)
T PHA03207        166 PKYK-CDLFTYVDR-----SGPLPLEQAITIQRRLLEALAYLH---GRGIIHRDVKTENIFLDEPENAVLGDFGAACKLD  236 (392)
T ss_pred             hhcC-CCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEccCccccccC
Confidence            9996 689988833     356899999999999999999999   9999999999999999999999999999998765


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ...... ......++..|++||
T Consensus       237 ~~~~~~-~~~~~~gt~~y~aPE  257 (392)
T PHA03207        237 AHPDTP-QCYGWSGTLETNSPE  257 (392)
T ss_pred             cccccc-cccccccccCccCHh
Confidence            443221 122334556778887

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.94  E-value=3.9e-26  Score=189.67  Aligned_cols=151  Identities=17%  Similarity=0.225  Sum_probs=128.3

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC-cchhhHHHHHHH-HHhcCCCceeeEeeEEecCCcceEEEe
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR-DGHGSCINNIVY-AAQMSHDHILKLIGCCLETPIPILAFE  137 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~-~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lv~e  137 (241)
                      ++|...+.||+|+||.||++.+  ++..||+|++..... .....+..|+.. ++.++||||+++++++..++..+++||
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e   80 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME   80 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence            3678889999999999999998  789999999876432 233456667665 556699999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCC-CeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPR-PIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~-~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      |++ ++|.+++..... ....+++..+..++.|++.||.|||   +. +++|+||||+||+++.++.+||+|||++..+.
T Consensus        81 ~~~-~~l~~~l~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH---~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~  155 (283)
T cd06617          81 VMD-TSLDKFYKKVYD-KGLTIPEDILGKIAVSIVKALEYLH---SKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLV  155 (283)
T ss_pred             hhc-ccHHHHHHHhcc-CCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecccccccc
Confidence            997 699888865422 2356899999999999999999999   76 99999999999999999999999999998764


Q ss_pred             C
Q 026214          217 E  217 (241)
Q Consensus       217 ~  217 (241)
                      .
T Consensus       156 ~  156 (283)
T cd06617         156 D  156 (283)
T ss_pred             c
Confidence            3

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.94  E-value=3.1e-26  Score=191.97  Aligned_cols=154  Identities=19%  Similarity=0.273  Sum_probs=131.3

Q ss_pred             cCCCcCCeeecccceEEEEEEE------------------CCeEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW------------------QERLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKL  122 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~------------------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l  122 (241)
                      ++|...+.||+|+||.||++.+                  +...||+|.+.... ......+.+|+.++..++||||+++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~   84 (296)
T cd05095           5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL   84 (296)
T ss_pred             hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence            4588889999999999999854                  23468999887543 2234678999999999999999999


Q ss_pred             eeEEecCCcceEEEeeCCCCCHHHHHhhcCCC------CCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCe
Q 026214          123 IGCCLETPIPILAFESVEYGNLRDRILSASQP------QTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHI  196 (241)
Q Consensus       123 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Ni  196 (241)
                      ++++...+..+++|||+++++|.+++......      ....+++..+..++.|++.||.|||   +.+++|+||||+||
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dlkp~Ni  161 (296)
T cd05095          85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLS---SLNFVHRDLATRNC  161 (296)
T ss_pred             EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHH---HCCeecccCChheE
Confidence            99999999999999999999999999764211      1234778899999999999999999   99999999999999


Q ss_pred             eEcCCCcEEEccccCceecCCC
Q 026214          197 LFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       197 ll~~~~~~ki~DfG~a~~~~~~  218 (241)
                      +++.++.++|+|||++..+...
T Consensus       162 li~~~~~~~l~dfg~~~~~~~~  183 (296)
T cd05095         162 LVGKNYTIKIADFGMSRNLYSG  183 (296)
T ss_pred             EEcCCCCEEeccCcccccccCC
Confidence            9999999999999999876443

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=6e-26  Score=187.07  Aligned_cols=169  Identities=21%  Similarity=0.216  Sum_probs=136.2

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC-----CcchhhHHHHHHHHHhcCCCceeeEeeEEecC--Ccc
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN-----RDGHGSCINNIVYAAQMSHDHILKLIGCCLET--PIP  132 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~  132 (241)
                      .+|...+.||+|++|.||+|.+  ++..|++|.+....     ......+.+|+.+++.++||||+++++++.+.  ...
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL   81 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence            4688899999999999999998  78999999875321     12335688999999999999999999998764  457


Q ss_pred             eEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCc
Q 026214          133 ILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS  212 (241)
Q Consensus       133 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a  212 (241)
                      ++++||+++++|.+++...     ..+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++
T Consensus        82 ~~v~e~~~~~~L~~~~~~~-----~~l~~~~~~~~~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~  153 (264)
T cd06653          82 SIFVEYMPGGSIKDQLKAY-----GALTENVTRRYTRQILQGVSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGAS  153 (264)
T ss_pred             EEEEEeCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECccccc
Confidence            8999999999999999654     34788899999999999999999   999999999999999999999999999999


Q ss_pred             eecCCCCccccceeecCCceeeeecC
Q 026214          213 ISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +.................+..|.+||
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~y~aPE  179 (264)
T cd06653         154 KRIQTICMSGTGIKSVTGTPYWMSPE  179 (264)
T ss_pred             cccccccccCccccccCCcccccCHh
Confidence            87643211111001122344577777

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.94  E-value=7.2e-26  Score=185.43  Aligned_cols=168  Identities=16%  Similarity=0.151  Sum_probs=138.7

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC--cchhhHHHHHHHHHhcCCCceeeEeeEEec-CCcceEEEe
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR--DGHGSCINNIVYAAQMSHDHILKLIGCCLE-TPIPILAFE  137 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~lv~e  137 (241)
                      .|...+.||.|++|.||++.+  ++..|++|.+.....  ...+.+.+|+.++++++|||++++.+.+.. +...++++|
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e   80 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG   80 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence            367788999999999999998  678899999875432  234568889999999999999999988764 446789999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCC
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE  217 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~  217 (241)
                      |+++++|.+++...   ....+++..+..++.+++.||.+||   +.+++|+||+|+||+++.++.++|+|||++..+..
T Consensus        81 ~~~~~~l~~~l~~~---~~~~l~~~~~~~~~~~l~~~l~~lH---~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~  154 (257)
T cd08223          81 FCEGGDLYHKLKEQ---KGKLLPENQVVEWFVQIAMALQYLH---EKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLEN  154 (257)
T ss_pred             ccCCCcHHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCchhEEEecCCcEEEecccceEEecc
Confidence            99999999999764   2345899999999999999999999   99999999999999999999999999999987754


Q ss_pred             CCccccceeecCCceeeeecCC
Q 026214          218 GGTSGAKCLKSERTEICCVREN  239 (241)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~e~  239 (241)
                      .....   .....+..|.+||-
T Consensus       155 ~~~~~---~~~~~~~~y~aPE~  173 (257)
T cd08223         155 QCDMA---STLIGTPYYMSPEL  173 (257)
T ss_pred             cCCcc---ccccCCcCccChhH
Confidence            43221   12234456788873

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=4.3e-26  Score=188.79  Aligned_cols=164  Identities=20%  Similarity=0.173  Sum_probs=139.9

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeC
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESV  139 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  139 (241)
                      +|...+.||.|++|.||+|.+  ++..|++|.+.... ......+.+|+.+++.++||||+++.+++..+...++++||+
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   81 (274)
T cd06609           2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC   81 (274)
T ss_pred             hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence            577788999999999999998  78999999987543 234466889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCC
Q 026214          140 EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGG  219 (241)
Q Consensus       140 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~  219 (241)
                      ++++|.+++..      ..+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++..+....
T Consensus        82 ~~~~L~~~~~~------~~~~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~  152 (274)
T cd06609          82 GGGSCLDLLKP------GKLDETYIAFILREVLLGLEYLH---EEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM  152 (274)
T ss_pred             CCCcHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEcccccceeecccc
Confidence            99999999943      26899999999999999999999   9999999999999999999999999999998886543


Q ss_pred             ccccceeecCCceeeeecC
Q 026214          220 TSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~e  238 (241)
                      ...   .....+..|++||
T Consensus       153 ~~~---~~~~~~~~y~~PE  168 (274)
T cd06609         153 SKR---NTFVGTPFWMAPE  168 (274)
T ss_pred             ccc---ccccCCccccChh
Confidence            211   1222344577777

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.94  E-value=2.1e-26  Score=191.50  Aligned_cols=165  Identities=18%  Similarity=0.220  Sum_probs=137.2

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      +|...+.||.|++|.||+|.+  ++..|++|.+....  ......+.+|+.+++.++||||+++++++.+....++++||
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY   80 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence            367778999999999999999  78899999987542  12235678899999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      ++ ++|.+++...    ...+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++..+..+
T Consensus        81 ~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~  152 (284)
T cd07839          81 CD-QDLKKYFDSC----NGDIDPEIVKSFMFQLLKGLAFCH---SHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP  152 (284)
T ss_pred             CC-CCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEcCCCcEEECccchhhccCCC
Confidence            97 5888887654    345899999999999999999999   999999999999999999999999999999876543


Q ss_pred             CccccceeecCCceeeeecC
Q 026214          219 GTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ....   .....+..|.+||
T Consensus       153 ~~~~---~~~~~~~~y~aPE  169 (284)
T cd07839         153 VRCY---SAEVVTLWYRPPD  169 (284)
T ss_pred             CCCc---CCCccccCCcChH
Confidence            2211   1122344677777

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.94  E-value=8.3e-27  Score=203.35  Aligned_cols=165  Identities=24%  Similarity=0.358  Sum_probs=141.9

Q ss_pred             CcCCeeecccceEEEEEEEC------CeEEEEEEeecc-CCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEe
Q 026214           65 DQKNVITEDWGCILYKGFWQ------ERLISVMRFRES-NRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFE  137 (241)
Q Consensus        65 ~~~~~lg~G~~g~Vy~~~~~------~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  137 (241)
                      ...++||+|-||.||+|.++      .-.||||.-+.+ .....+.|+.|..+|+.++||||++++|+|.+. ..|+|||
T Consensus       392 tl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~-P~WivmE  470 (974)
T KOG4257|consen  392 TLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PMWIVME  470 (974)
T ss_pred             cHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc-ceeEEEe
Confidence            34578999999999999992      245899987764 445578899999999999999999999999754 5899999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCC
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE  217 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~  217 (241)
                      +++-|.|..++..+    ...++......+++|++.||.|||   +.++|||||.++|||+...-.+|++|||+++-++.
T Consensus       471 L~~~GELr~yLq~n----k~sL~l~tL~ly~~Qi~talaYLe---SkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed  543 (974)
T KOG4257|consen  471 LAPLGELREYLQQN----KDSLPLRTLTLYCYQICTALAYLE---SKRFVHRDIAARNILVSSPQCVKLADFGLSRYLED  543 (974)
T ss_pred             cccchhHHHHHHhc----cccchHHHHHHHHHHHHHHHHHHH---hhchhhhhhhhhheeecCcceeeecccchhhhccc
Confidence            99999999999776    556999999999999999999999   99999999999999999999999999999998877


Q ss_pred             CCccccceeecCCceeeeecCC
Q 026214          218 GGTSGAKCLKSERTEICCVREN  239 (241)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~e~  239 (241)
                      +..+..+  .+..+--|++||-
T Consensus       544 ~~yYkaS--~~kLPIKWmaPES  563 (974)
T KOG4257|consen  544 DAYYKAS--RGKLPIKWMAPES  563 (974)
T ss_pred             cchhhcc--ccccceeecCccc
Confidence            7655443  4555556788884

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.94  E-value=5.9e-26  Score=185.97  Aligned_cols=148  Identities=22%  Similarity=0.407  Sum_probs=131.5

Q ss_pred             CCCcCCeeecccceEEEEEEE-CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCCC
Q 026214           63 NYDQKNVITEDWGCILYKGFW-QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEY  141 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~  141 (241)
                      .|...+.||.|+||.||++.+ ++..+|+|.+.... .....+.+|+.+++.++|||++++++++......++++||+++
T Consensus         5 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~   83 (256)
T cd05112           5 ELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEH   83 (256)
T ss_pred             HeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCC
Confidence            466778999999999999988 67889999886543 2346789999999999999999999999999999999999999


Q ss_pred             CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          142 GNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       142 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      ++|.+++...    ...+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++.....+
T Consensus        84 ~~L~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~  153 (256)
T cd05112          84 GCLSDYLRAQ----RGKFSQETLLGMCLDVCEGMAYLE---SSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDD  153 (256)
T ss_pred             CcHHHHHHhC----ccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccccceEEEcCCCeEEECCCcceeecccC
Confidence            9999998654    345789999999999999999999   999999999999999999999999999999876543

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.94  E-value=1.6e-26  Score=215.82  Aligned_cols=176  Identities=18%  Similarity=0.184  Sum_probs=139.3

Q ss_pred             HHHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEecC--Cc
Q 026214           58 KLATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLET--PI  131 (241)
Q Consensus        58 ~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~  131 (241)
                      ....+.|.....||.|+||.||+|.+  ++..||+|.+....  ......+..|+.++..|+||||++++++|...  ..
T Consensus         9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~   88 (1021)
T PTZ00266          9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQK   88 (1021)
T ss_pred             ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCE
Confidence            34457799999999999999999999  77889999887532  22346789999999999999999999988653  56


Q ss_pred             ceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCC----CCCeEEccCCCCCeeEcC-------
Q 026214          132 PILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGF----PRPIVYRDFKTAHILFNE-------  200 (241)
Q Consensus       132 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~----~~~ivH~dlk~~Nill~~-------  200 (241)
                      +|+||||+++++|.+++..... ....+++..++.|+.||+.||.|||...    ..+|||+||||+||||+.       
T Consensus        89 lyIVMEY~~gGSL~~lL~k~~~-~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~  167 (1021)
T PTZ00266         89 LYILMEFCDAGDLSRNIQKCYK-MFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGK  167 (1021)
T ss_pred             EEEEEeCCCCCcHHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccc
Confidence            8999999999999999965321 2356999999999999999999999321    145999999999999964       


Q ss_pred             ----------CCcEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          201 ----------ENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       201 ----------~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                                .+.+||+|||++..+.......    ...++..|++||
T Consensus       168 i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~----s~vGTp~YmAPE  211 (1021)
T PTZ00266        168 ITAQANNLNGRPIAKIGDFGLSKNIGIESMAH----SCVGTPYYWSPE  211 (1021)
T ss_pred             ccccccccCCCCceEEccCCcccccccccccc----ccCCCccccCHH
Confidence                      2348999999998765443211    123455678887

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.94  E-value=6.3e-26  Score=187.81  Aligned_cols=152  Identities=18%  Similarity=0.271  Sum_probs=131.2

Q ss_pred             cCCCcCCeeecccceEEEEEEE-------CCeEEEEEEeeccCCc-chhhHHHHHHHHHhcCCCceeeEeeEEecCCcce
Q 026214           62 NNYDQKNVITEDWGCILYKGFW-------QERLISVMRFRESNRD-GHGSCINNIVYAAQMSHDHILKLIGCCLETPIPI  133 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  133 (241)
                      .+|.....||.|+||.||+|..       +...|++|.+...... ....+.+|+.++++++||||+++++++......+
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   84 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY   84 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence            4577888999999999999996       2467899987654432 3467899999999999999999999999889999


Q ss_pred             EEEeeCCCCCHHHHHhhcCCC----CCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccc
Q 026214          134 LAFESVEYGNLRDRILSASQP----QTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDF  209 (241)
Q Consensus       134 lv~e~~~~gsL~~~l~~~~~~----~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~Df  209 (241)
                      ++|||+++++|.+++......    ....+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.++++||
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~~~  161 (275)
T cd05046          85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLS---NARFVHRDLAARNCLVSSQREVKVSLL  161 (275)
T ss_pred             EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhh---hcCcccCcCccceEEEeCCCcEEEccc
Confidence            999999999999999765211    1226899999999999999999999   999999999999999999999999999


Q ss_pred             cCceecC
Q 026214          210 SLSISIP  216 (241)
Q Consensus       210 G~a~~~~  216 (241)
                      |++....
T Consensus       162 ~~~~~~~  168 (275)
T cd05046         162 SLSKDVY  168 (275)
T ss_pred             ccccccC
Confidence            9987553

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.94  E-value=4.6e-26  Score=190.52  Aligned_cols=166  Identities=18%  Similarity=0.249  Sum_probs=137.8

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC--cchhhHHHHHHHHHhcCCCceeeEeeEEecC--CcceEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR--DGHGSCINNIVYAAQMSHDHILKLIGCCLET--PIPILA  135 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv  135 (241)
                      ++|...+.||.|++|.||+|.+  ++..+++|.+.....  .....+.+|+.++.+++||||+++.+++...  +..+++
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv   84 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV   84 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence            4577788999999999999999  688999999875432  2234567899999999999999999999877  889999


Q ss_pred             EeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceec
Q 026214          136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI  215 (241)
Q Consensus       136 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~  215 (241)
                      +||++ ++|.+++...    ...+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++..+
T Consensus        85 ~e~~~-~~L~~~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~  156 (293)
T cd07843          85 MEYVE-HDLKSLMETM----KQPFLQSEVKCLMLQLLSGVAHLH---DNWILHRDLKTSNLLLNNRGILKICDFGLAREY  156 (293)
T ss_pred             ehhcC-cCHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCcEEEeecCceeec
Confidence            99997 5999998664    236899999999999999999999   999999999999999999999999999999987


Q ss_pred             CCCCccccceeecCCceeeeecC
Q 026214          216 PEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ..+.....   ....+..|++||
T Consensus       157 ~~~~~~~~---~~~~~~~~~aPE  176 (293)
T cd07843         157 GSPLKPYT---QLVVTLWYRAPE  176 (293)
T ss_pred             cCCccccc---cccccccccCch
Confidence            65432111   122344567777

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.94  E-value=5.4e-26  Score=190.70  Aligned_cols=151  Identities=22%  Similarity=0.342  Sum_probs=128.2

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CC--eEEEEEEeeccC-CcchhhHHHHHHHHHhc-CCCceeeEeeEEecCCcceEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QE--RLISVMRFRESN-RDGHGSCINNIVYAAQM-SHDHILKLIGCCLETPIPILA  135 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~--~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv  135 (241)
                      ++|...+.||+|+||.||+|.+  ++  ..+++|.++... ....+.+.+|+.++.++ +||||+++++++...+..+++
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv   81 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA   81 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence            4677889999999999999987  33  347888876432 22346789999999999 799999999999999999999


Q ss_pred             EeeCCCCCHHHHHhhcCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcE
Q 026214          136 FESVEYGNLRDRILSASQP-----------QTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVA  204 (241)
Q Consensus       136 ~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~  204 (241)
                      +||+++++|.+++......           ....+++..+..++.|++.||.|||   +.+++|+||||+|||++.++.+
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~  158 (297)
T cd05089          82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLS---EKQFIHRDLAARNVLVGENLAS  158 (297)
T ss_pred             EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCcCCcceEEECCCCeE
Confidence            9999999999999654210           1235888999999999999999999   9999999999999999999999


Q ss_pred             EEccccCceec
Q 026214          205 KMFDFSLSISI  215 (241)
Q Consensus       205 ki~DfG~a~~~  215 (241)
                      ||+|||++...
T Consensus       159 kl~dfg~~~~~  169 (297)
T cd05089         159 KIADFGLSRGE  169 (297)
T ss_pred             EECCcCCCccc
Confidence            99999998743

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.94  E-value=5.2e-26  Score=188.80  Aligned_cols=153  Identities=22%  Similarity=0.333  Sum_probs=130.3

Q ss_pred             hcCCCcCCeeecccceEEEEEEEC-------CeEEEEEEeeccCCc-chhhHHHHHHHHHhcCCCceeeEeeEEecCCcc
Q 026214           61 TNNYDQKNVITEDWGCILYKGFWQ-------ERLISVMRFRESNRD-GHGSCINNIVYAAQMSHDHILKLIGCCLETPIP  132 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~~-------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  132 (241)
                      +++|...+.||+|++|.||+|.+.       +..|++|.+...... ....+.+|+.+++.++|+||+++++++.+....
T Consensus         5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   84 (277)
T cd05036           5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPR   84 (277)
T ss_pred             HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCc
Confidence            466888899999999999999982       467889987654322 235689999999999999999999999999999


Q ss_pred             eEEEeeCCCCCHHHHHhhcCC--CCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCC---cEEEc
Q 026214          133 ILAFESVEYGNLRDRILSASQ--PQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEEN---VAKMF  207 (241)
Q Consensus       133 ~lv~e~~~~gsL~~~l~~~~~--~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~---~~ki~  207 (241)
                      +++|||+++++|.+++.....  .....+++..++.++.|++.||.|||   +.+++|+||+|+||+++.++   .+||+
T Consensus        85 ~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~nil~~~~~~~~~~kl~  161 (277)
T cd05036          85 FILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLE---ENHFIHRDIAARNCLLTCKGPGRVAKIA  161 (277)
T ss_pred             EEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccchheEEEeccCCCcceEec
Confidence            999999999999999976521  11235889999999999999999999   99999999999999998654   59999


Q ss_pred             cccCceecC
Q 026214          208 DFSLSISIP  216 (241)
Q Consensus       208 DfG~a~~~~  216 (241)
                      |||+++.+.
T Consensus       162 dfg~~~~~~  170 (277)
T cd05036         162 DFGMARDIY  170 (277)
T ss_pred             cCccccccC
Confidence            999998763

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.94  E-value=7.9e-26  Score=184.69  Aligned_cols=143  Identities=24%  Similarity=0.327  Sum_probs=128.1

Q ss_pred             CeeecccceEEEEEEE-CCeEEEEEEeeccCCc-chhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCCCCCHH
Q 026214           68 NVITEDWGCILYKGFW-QERLISVMRFRESNRD-GHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLR  145 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~  145 (241)
                      ++||.|++|.||++.+ .+..|++|.+...... ....+.+|+.+++.++||||+++++++......++++||+++++|.
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~   80 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL   80 (251)
T ss_pred             CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence            4689999999999998 6899999988765433 4567899999999999999999999999999999999999999999


Q ss_pred             HHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCC
Q 026214          146 DRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE  217 (241)
Q Consensus       146 ~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~  217 (241)
                      +++...    ...+++..+..++.+++.||.|||   +.+++|+||+|+||+++.++.++|+|||++.....
T Consensus        81 ~~l~~~----~~~~~~~~~~~~~~~~~~~l~~lH---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~  145 (251)
T cd05041          81 TFLRKK----KNRLTVKKLLQMSLDAAAGMEYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSREEEG  145 (251)
T ss_pred             HHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---hCCEehhhcCcceEEEcCCCcEEEeeccccccccC
Confidence            999664    335789999999999999999999   99999999999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.94  E-value=4.9e-26  Score=194.11  Aligned_cols=175  Identities=18%  Similarity=0.245  Sum_probs=140.3

Q ss_pred             hcCCCcCCeeecccceEEEEEEE---------CCeEEEEEEeeccC-CcchhhHHHHHHHHHhc-CCCceeeEeeEEecC
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW---------QERLISVMRFRESN-RDGHGSCINNIVYAAQM-SHDHILKLIGCCLET  129 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~---------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~  129 (241)
                      ...|...+.||+|+||.||++.+         ....||+|.+.... ......+.+|+.++.++ +||||+++++++...
T Consensus        11 ~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~   90 (334)
T cd05100          11 RTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD   90 (334)
T ss_pred             HhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccC
Confidence            34578889999999999999975         12368999877542 22356789999999999 899999999999999


Q ss_pred             CcceEEEeeCCCCCHHHHHhhcCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeE
Q 026214          130 PIPILAFESVEYGNLRDRILSASQ-----------PQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILF  198 (241)
Q Consensus       130 ~~~~lv~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill  198 (241)
                      +..++++||+++++|.+++.....           .....+++..+..++.|++.||.|||   ..+++|+||||+||++
T Consensus        91 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~givH~dlkp~Nill  167 (334)
T cd05100          91 GPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLA---SQKCIHRDLAARNVLV  167 (334)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH---HCCeeccccccceEEE
Confidence            999999999999999999975321           12335788999999999999999999   9999999999999999


Q ss_pred             cCCCcEEEccccCceecCCCCccccceeecCCceeeeecCC
Q 026214          199 NEENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVREN  239 (241)
Q Consensus       199 ~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e~  239 (241)
                      +.++.++|+|||+++.+....... ....+..+..|++||-
T Consensus       168 ~~~~~~kL~Dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~  207 (334)
T cd05100         168 TEDNVMKIADFGLARDVHNIDYYK-KTTNGRLPVKWMAPEA  207 (334)
T ss_pred             cCCCcEEECCcccceecccccccc-cccCCCcCceEcCHHH
Confidence            999999999999998765432211 1122333456888873

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.94  E-value=4.7e-26  Score=189.31  Aligned_cols=177  Identities=19%  Similarity=0.220  Sum_probs=143.5

Q ss_pred             cCHHHHHHHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhc-CCCceeeEeeEEec
Q 026214           52 FSAQELKLATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQM-SHDHILKLIGCCLE  128 (241)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~  128 (241)
                      .+..++..+.+.|...+.||.|+||.||+|.+  ++..+|+|.+.... .....+..|+.++.++ +||||+++++++..
T Consensus         6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   84 (282)
T cd06636           6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIK   84 (282)
T ss_pred             hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence            35566666778899999999999999999998  78899999886543 2345688899999999 79999999999853


Q ss_pred             ------CCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCC
Q 026214          129 ------TPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEEN  202 (241)
Q Consensus       129 ------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~  202 (241)
                            ....+++|||+++++|.+++...   ....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++
T Consensus        85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dl~~~nili~~~~  158 (282)
T cd06636          85 KSPPGHDDQLWLVMEFCGAGSVTDLVKNT---KGNALKEDWIAYICREILRGLAHLH---AHKVIHRDIKGQNVLLTENA  158 (282)
T ss_pred             ccccCCCCEEEEEEEeCCCCcHHHHHHHc---cCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCC
Confidence                  35689999999999999999764   2345788889999999999999999   99999999999999999999


Q ss_pred             cEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          203 VAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       203 ~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .++|+|||++...........   ....+..|.+||
T Consensus       159 ~~~l~dfg~~~~~~~~~~~~~---~~~~~~~y~aPE  191 (282)
T cd06636         159 EVKLVDFGVSAQLDRTVGRRN---TFIGTPYWMAPE  191 (282)
T ss_pred             CEEEeeCcchhhhhccccCCC---cccccccccCHh
Confidence            999999999886643221111   122334567776

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.94  E-value=1.6e-26  Score=191.70  Aligned_cols=163  Identities=20%  Similarity=0.226  Sum_probs=136.0

Q ss_pred             CCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCC
Q 026214           64 YDQKNVITEDWGCILYKGFW--QERLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVE  140 (241)
Q Consensus        64 ~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~  140 (241)
                      |...+.||.|+||.||+|.+  ++..||+|.+.... ....+.+.+|+.+++.++||||+++++++...+..++|+||++
T Consensus         6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   85 (277)
T cd06642           6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLG   85 (277)
T ss_pred             HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccC
Confidence            44557899999999999988  77899999887443 2334568899999999999999999999999999999999999


Q ss_pred             CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCc
Q 026214          141 YGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGT  220 (241)
Q Consensus       141 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~  220 (241)
                      +++|.+++.      ...+++..+..++.|++.||.|||   +.+++|+||+|+||++++++.++++|||++..+.....
T Consensus        86 ~~~L~~~~~------~~~~~~~~~~~~~~~i~~~l~~lH---~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~  156 (277)
T cd06642          86 GGSALDLLK------PGPLEETYIATILREILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI  156 (277)
T ss_pred             CCcHHHHhh------cCCCCHHHHHHHHHHHHHHHHHHh---cCCeeccCCChheEEEeCCCCEEEccccccccccCcch
Confidence            999999883      345889999999999999999999   99999999999999999999999999999987654322


Q ss_pred             cccceeecCCceeeeecC
Q 026214          221 SGAKCLKSERTEICCVRE  238 (241)
Q Consensus       221 ~~~~~~~~~~~~~~~~~e  238 (241)
                      ...   ....+..|++||
T Consensus       157 ~~~---~~~~~~~y~aPE  171 (277)
T cd06642         157 KRN---TFVGTPFWMAPE  171 (277)
T ss_pred             hhh---cccCcccccCHH
Confidence            111   112344577776

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.94  E-value=7.6e-26  Score=187.80  Aligned_cols=164  Identities=18%  Similarity=0.210  Sum_probs=137.6

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeC
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESV  139 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  139 (241)
                      .|...+.||.|+||.||+|.+  ++..||+|.+.... ......+.+|+.+++.++||||+++++++.++...++||||+
T Consensus         5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06640           5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL   84 (277)
T ss_pred             hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence            366678899999999999998  68899999887543 233567889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCC
Q 026214          140 EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGG  219 (241)
Q Consensus       140 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~  219 (241)
                      ++++|.+++..      .++++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++..+....
T Consensus        85 ~~~~L~~~i~~------~~l~~~~~~~~~~~l~~~l~~lh---~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~  155 (277)
T cd06640          85 GGGSALDLLRA------GPFDEFQIATMLKEILKGLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ  155 (277)
T ss_pred             CCCcHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH---hCCccCcCCChhhEEEcCCCCEEEcccccceeccCCc
Confidence            99999999843      35788899999999999999999   9999999999999999999999999999998775433


Q ss_pred             ccccceeecCCceeeeecC
Q 026214          220 TSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~e  238 (241)
                      ....   ....+..|.+||
T Consensus       156 ~~~~---~~~~~~~y~apE  171 (277)
T cd06640         156 IKRN---TFVGTPFWMAPE  171 (277)
T ss_pred             cccc---cccCcccccCHh
Confidence            2111   112334567777

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.94  E-value=7e-26  Score=187.26  Aligned_cols=167  Identities=15%  Similarity=0.178  Sum_probs=136.3

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCc----------chhhHHHHHHHHHhcCCCceeeEeeEEecCC
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRD----------GHGSCINNIVYAAQMSHDHILKLIGCCLETP  130 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~----------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  130 (241)
                      +|...+.||.|++|.||+|..  ++..||+|.+......          ..+.+.+|+.++..++|||++++++++...+
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   81 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE   81 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence            366778999999999999987  7889999987642110          1245778999999999999999999999999


Q ss_pred             cceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEcccc
Q 026214          131 IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFS  210 (241)
Q Consensus       131 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG  210 (241)
                      ..++|+||+++++|.+++...     ..+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++++|||
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~~~nil~~~~~~~~l~d~~  153 (272)
T cd06629          82 YLSIFLEYVPGGSIGSCLRTY-----GRFEEQLVRFFTEQVLEGLAYLH---SKGILHRDLKADNLLVDADGICKISDFG  153 (272)
T ss_pred             ceEEEEecCCCCcHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHh---hCCeeecCCChhhEEEcCCCeEEEeecc
Confidence            999999999999999999654     45888999999999999999999   8999999999999999999999999999


Q ss_pred             CceecCCCCccccceeecCCceeeeecC
Q 026214          211 LSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       211 ~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ++.......... .......+..|.+||
T Consensus       154 ~~~~~~~~~~~~-~~~~~~~~~~y~~PE  180 (272)
T cd06629         154 ISKKSDDIYDND-QNMSMQGSVFWMAPE  180 (272)
T ss_pred             cccccccccccc-ccccccCCccccCHH
Confidence            998654322111 112223344566776

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.94  E-value=2.7e-26  Score=195.84  Aligned_cols=168  Identities=17%  Similarity=0.173  Sum_probs=137.8

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEecCC-----cc
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLETP-----IP  132 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~  132 (241)
                      +++|...+.||+|++|.||+|.+  ++..||+|.+.... ......+.+|+.++..++||||+++++++....     ..
T Consensus         4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   83 (336)
T cd07849           4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV   83 (336)
T ss_pred             ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence            46788899999999999999998  78999999986432 223456888999999999999999998876543     47


Q ss_pred             eEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCc
Q 026214          133 ILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS  212 (241)
Q Consensus       133 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a  212 (241)
                      ++++||+. ++|.+.+.      ...+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.++|+|||++
T Consensus        84 ~lv~e~~~-~~l~~~~~------~~~l~~~~~~~i~~ql~~aL~~LH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~  153 (336)
T cd07849          84 YIVQELME-TDLYKLIK------TQHLSNDHIQYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTNCDLKICDFGLA  153 (336)
T ss_pred             EEEehhcc-cCHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEECcccce
Confidence            99999997 58888873      345899999999999999999999   999999999999999999999999999999


Q ss_pred             eecCCCCccccceeecCCceeeeecC
Q 026214          213 ISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .................++..|+|||
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~y~aPE  179 (336)
T cd07849         154 RIADPEHDHTGFLTEYVATRWYRAPE  179 (336)
T ss_pred             eeccccccccCCcCCcCcCCCccChH
Confidence            87755433222222233455678887

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.94  E-value=1.8e-26  Score=191.94  Aligned_cols=166  Identities=21%  Similarity=0.279  Sum_probs=139.1

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCc--chhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEe
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRD--GHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFE  137 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  137 (241)
                      ++|...+.||+|++|.||+|.+  ++..||+|.+......  ..+.+.+|+.+++.++||||+++++++...+..++++|
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE   80 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence            3577889999999999999998  6889999987654322  34568899999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCC
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE  217 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~  217 (241)
                      |+++++|.++....     ..+++..+..++.|++.||.|||   +.+++|+||+|+||++++++.++|+|||++..+..
T Consensus        81 ~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~LH---~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~  152 (286)
T cd07846          81 FVDHTVLDDLEKYP-----NGLDESRVRKYLFQILRGIEFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAA  152 (286)
T ss_pred             cCCccHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCcEEEEeeeeeeeccC
Confidence            99988888776432     34899999999999999999999   89999999999999999999999999999987755


Q ss_pred             CCccccceeecCCceeeeecC
Q 026214          218 GGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ......   ....+..|.+||
T Consensus       153 ~~~~~~---~~~~~~~y~aPE  170 (286)
T cd07846         153 PGEVYT---DYVATRWYRAPE  170 (286)
T ss_pred             CccccC---cccceeeccCcH
Confidence            432211   122355677887

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.94  E-value=4.4e-26  Score=191.80  Aligned_cols=168  Identities=20%  Similarity=0.318  Sum_probs=134.2

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCe----EEEEEEeeccCCc-chhhHHHHHHHHHhcCCCceeeEeeEEecCCcceE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QER----LISVMRFRESNRD-GHGSCINNIVYAAQMSHDHILKLIGCCLETPIPIL  134 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~----~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  134 (241)
                      ..|...+.||+|+||.||+|.+  ++.    .||+|.+...... ....+.+|+.+++.++||||+++++++... ..++
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~   85 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQL   85 (303)
T ss_pred             hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Ccee
Confidence            4466788999999999999987  443    5788887654322 234688999999999999999999998754 4678


Q ss_pred             EEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCcee
Q 026214          135 AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSIS  214 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~  214 (241)
                      ++||+++|+|.+++...    ...+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.+||+|||+++.
T Consensus        86 v~e~~~~g~l~~~~~~~----~~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~  158 (303)
T cd05110          86 VTQLMPHGCLLDYVHEH----KDNIGSQLLLNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARL  158 (303)
T ss_pred             eehhcCCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHh---hcCeeccccccceeeecCCCceEEcccccccc
Confidence            99999999999998654    335888999999999999999999   99999999999999999999999999999987


Q ss_pred             cCCCCccccceeecCCceeeeecC
Q 026214          215 IPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +........ ......+..|++||
T Consensus       159 ~~~~~~~~~-~~~~~~~~~y~~PE  181 (303)
T cd05110         159 LEGDEKEYN-ADGGKMPIKWMALE  181 (303)
T ss_pred             ccCcccccc-cCCCccccccCCHH
Confidence            754432211 11222334577777

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.94  E-value=3.4e-27  Score=199.16  Aligned_cols=167  Identities=20%  Similarity=0.240  Sum_probs=146.7

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      +.|..-+.||+|+||.||-+.-  +|+.+|.|++.+..   ..+..-.++|-.+|.+++.+.||.+-..|.+.+.++||+
T Consensus       185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVL  264 (591)
T KOG0986|consen  185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVL  264 (591)
T ss_pred             cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEE
Confidence            6678889999999999999877  99999999886542   233455789999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ..|.||+|.-+|.+.   ....+++..++.++.+|++||.+||   ..+||.|||||+|||+|+.|+++|+|+|+|..++
T Consensus       265 tlMNGGDLkfHiyn~---g~~gF~e~ra~FYAAEi~cGLehlH---~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~  338 (591)
T KOG0986|consen  265 TLMNGGDLKFHIYNH---GNPGFDEQRARFYAAEIICGLEHLH---RRRIVYRDLKPENILLDDHGHVRISDLGLAVEIP  338 (591)
T ss_pred             EeecCCceeEEeecc---CCCCCchHHHHHHHHHHHhhHHHHH---hcceeeccCChhheeeccCCCeEeeccceEEecC
Confidence            999999999999776   3456999999999999999999999   9999999999999999999999999999999988


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .......    ..+|..|+|||
T Consensus       339 ~g~~~~~----rvGT~GYMAPE  356 (591)
T KOG0986|consen  339 EGKPIRG----RVGTVGYMAPE  356 (591)
T ss_pred             CCCcccc----ccCcccccCHH
Confidence            7764432    25667788887

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.94  E-value=8.8e-26  Score=188.75  Aligned_cols=170  Identities=18%  Similarity=0.176  Sum_probs=136.9

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC--cchhhHHHHHHHHHhc-CCCceeeEeeEEecCCc-----
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR--DGHGSCINNIVYAAQM-SHDHILKLIGCCLETPI-----  131 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~-----  131 (241)
                      ++|...+.||+|+||.||+|.+  ++..||+|.+.....  .....+.+|+.++..+ +||||+++++++...+.     
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~   80 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS   80 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence            3688889999999999999998  789999998765432  2345688999999999 56999999999877665     


Q ss_pred             ceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcC-CCcEEEcccc
Q 026214          132 PILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNE-ENVAKMFDFS  210 (241)
Q Consensus       132 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~-~~~~ki~DfG  210 (241)
                      .+++|||+++ +|.+++..........+++..+..++.||+.||.|||   ..+++|+||+|+||+++. ++.++|+|||
T Consensus        81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~~~nil~~~~~~~~kl~dfg  156 (295)
T cd07837          81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCH---KHGVMHRDLKPQNLLVDKQKGLLKIADLG  156 (295)
T ss_pred             EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHEEEecCCCeEEEeecc
Confidence            8999999984 8999887653222346899999999999999999999   999999999999999998 8999999999


Q ss_pred             CceecCCCCccccceeecCCceeeeecC
Q 026214          211 LSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       211 ~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ++..+..+.....   ....+..|.+||
T Consensus       157 ~~~~~~~~~~~~~---~~~~~~~~~aPE  181 (295)
T cd07837         157 LGRAFSIPVKSYT---HEIVTLWYRAPE  181 (295)
T ss_pred             cceecCCCccccC---CcccccCCCChH
Confidence            9987654322211   112344567777

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=1.3e-27  Score=200.85  Aligned_cols=166  Identities=19%  Similarity=0.193  Sum_probs=145.0

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      ..|...++||+|+||.||+|.+  +++.||+|.+.-+. ........+|+.++..++++||.++++.+..+..+|++|||
T Consensus        13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey   92 (467)
T KOG0201|consen   13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY   92 (467)
T ss_pred             cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence            4466778999999999999999  88999999997653 33457788999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      |.+|++.+++...     ..+++..+.-++.+++.||.|||   ..+.+|||||+.|||+...|.+|++|||++..++..
T Consensus        93 ~~gGsv~~lL~~~-----~~~~E~~i~~ilre~l~~l~ylH---~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~  164 (467)
T KOG0201|consen   93 CGGGSVLDLLKSG-----NILDEFEIAVILREVLKGLDYLH---SEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNT  164 (467)
T ss_pred             hcCcchhhhhccC-----CCCccceeeeehHHHHHHhhhhh---hcceecccccccceeEeccCcEEEEecceeeeeech
Confidence            9999999999443     33488888889999999999999   999999999999999999999999999999999887


Q ss_pred             CccccceeecCCceeeeecC
Q 026214          219 GTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .....+.   -+++.|||||
T Consensus       165 ~~rr~tf---vGTPfwMAPE  181 (467)
T KOG0201|consen  165 VKRRKTF---VGTPFWMAPE  181 (467)
T ss_pred             hhccccc---cccccccchh
Confidence            6655333   3456779998

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.94  E-value=1.2e-25  Score=186.71  Aligned_cols=163  Identities=19%  Similarity=0.232  Sum_probs=136.1

Q ss_pred             CCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCC
Q 026214           64 YDQKNVITEDWGCILYKGFW--QERLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVE  140 (241)
Q Consensus        64 ~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~  140 (241)
                      |...+.||.|+||.||+|.+  ++..||+|.+.... ......+.+|+.++..++||||+++++++..++..++|+||++
T Consensus         6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   85 (277)
T cd06641           6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG   85 (277)
T ss_pred             hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCC
Confidence            66678999999999999987  77899999876433 2234568899999999999999999999999999999999999


Q ss_pred             CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCc
Q 026214          141 YGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGT  220 (241)
Q Consensus       141 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~  220 (241)
                      +++|.+++.      ...+++..+..++.|++.|+.|||   +.+++|+||+|+||+++.++.++|+|||++..+.....
T Consensus        86 ~~~l~~~i~------~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~  156 (277)
T cd06641          86 GGSALDLLE------PGPLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI  156 (277)
T ss_pred             CCcHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHc---cCCeecCCCCHHhEEECCCCCEEEeecccceecccchh
Confidence            999999984      335889999999999999999999   99999999999999999999999999999987654321


Q ss_pred             cccceeecCCceeeeecC
Q 026214          221 SGAKCLKSERTEICCVRE  238 (241)
Q Consensus       221 ~~~~~~~~~~~~~~~~~e  238 (241)
                      ...   ....+..|++||
T Consensus       157 ~~~---~~~~~~~y~~PE  171 (277)
T cd06641         157 KRN---TFVGTPFWMAPE  171 (277)
T ss_pred             hhc---cccCCccccChh
Confidence            111   112334567776

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.94  E-value=3.7e-26  Score=190.05  Aligned_cols=171  Identities=16%  Similarity=0.177  Sum_probs=136.2

Q ss_pred             CCcCCeeecccceEEEEEEE-------CCeEEEEEEeeccCCc-chhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEE
Q 026214           64 YDQKNVITEDWGCILYKGFW-------QERLISVMRFRESNRD-GHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA  135 (241)
Q Consensus        64 ~~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  135 (241)
                      |...+.||+|+||.||+|.+       .+..||+|.+...... ....+.+|+.++..++||||+++++++......+++
T Consensus         7 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~   86 (283)
T cd05091           7 VRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMI   86 (283)
T ss_pred             HHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEE
Confidence            45567899999999999987       1478999998754322 235688899999999999999999999999999999


Q ss_pred             EeeCCCCCHHHHHhhcCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcE
Q 026214          136 FESVEYGNLRDRILSASQ-----------PQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVA  204 (241)
Q Consensus       136 ~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~  204 (241)
                      +||+++++|.+++.....           .....+++..+..++.|++.||.|||   +.+++||||||+||++++++.+
T Consensus        87 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH---~~gi~H~dlkp~Nil~~~~~~~  163 (283)
T cd05091          87 FSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLS---SHHVVHKDLATRNVLVFDKLNV  163 (283)
T ss_pred             EEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HcCccccccchhheEecCCCce
Confidence            999999999999853210           01235788889999999999999999   9999999999999999999999


Q ss_pred             EEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          205 KMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       205 ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ||+|||+++.+........ ......+..|++||
T Consensus       164 kl~Dfg~~~~~~~~~~~~~-~~~~~~~~~y~aPE  196 (283)
T cd05091         164 KISDLGLFREVYAADYYKL-MGNSLLPIRWMSPE  196 (283)
T ss_pred             Eecccccccccccchheee-ccCccCCccccCHH
Confidence            9999999987644322111 11112234678887

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.94  E-value=8.2e-26  Score=190.28  Aligned_cols=145  Identities=17%  Similarity=0.188  Sum_probs=130.0

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      ++|...+.||+|+||.||++.+  ++..|++|.+....   ......+.+|+.++..++||||+++++.+..++..+++|
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM   80 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence            4678889999999999999998  77899999987643   123456789999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCcee
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSIS  214 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~  214 (241)
                      ||+++++|.+++...     ..+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++++|||+++.
T Consensus        81 e~~~g~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~  150 (305)
T cd05609          81 EYVEGGDCATLLKNI-----GALPVDMARMYFAETVLALEYLH---NYGIVHRDLKPDNLLITSMGHIKLTDFGLSKI  150 (305)
T ss_pred             ecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHEEECCCCCEEEeeCCCccc
Confidence            999999999999554     35899999999999999999999   99999999999999999999999999999874

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.94  E-value=6.4e-26  Score=189.36  Aligned_cols=167  Identities=16%  Similarity=0.142  Sum_probs=137.9

Q ss_pred             CCCcCCeeecccceEEEEEEE-----CCeEEEEEEeeccC----CcchhhHHHHHHHHHhc-CCCceeeEeeEEecCCcc
Q 026214           63 NYDQKNVITEDWGCILYKGFW-----QERLISVMRFRESN----RDGHGSCINNIVYAAQM-SHDHILKLIGCCLETPIP  132 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~  132 (241)
                      +|...+.||.|+||.||.+..     ++..||+|.+....    ....+.+.+|+.++..+ +|+||+++++++..+...
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL   80 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence            467788999999999999986     67889999987532    12345678899999999 699999999999988899


Q ss_pred             eEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCc
Q 026214          133 ILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS  212 (241)
Q Consensus       133 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a  212 (241)
                      ++++||+++++|.+++...     ..+++..+..++.|++.||.|||   +.+++|+||+|+|||++.++.++|+|||++
T Consensus        81 ~lv~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~  152 (290)
T cd05613          81 HLILDYINGGELFTHLSQR-----ERFKEQEVQIYSGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLS  152 (290)
T ss_pred             EEEEecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEECCCCCEEEeeCccc
Confidence            9999999999999999654     34788999999999999999999   999999999999999999999999999999


Q ss_pred             eecCCCCccccceeecCCceeeeecCC
Q 026214          213 ISIPEGGTSGAKCLKSERTEICCVREN  239 (241)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~e~  239 (241)
                      ..+..+.........  ++..|++||-
T Consensus       153 ~~~~~~~~~~~~~~~--~~~~y~aPE~  177 (290)
T cd05613         153 KEFHEDEVERAYSFC--GTIEYMAPDI  177 (290)
T ss_pred             eeccccccccccccc--CCcccCChhh
Confidence            877554332222222  2334677773

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.94  E-value=1.1e-25  Score=184.82  Aligned_cols=167  Identities=17%  Similarity=0.219  Sum_probs=142.4

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC-cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR-DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      ++|...+.||.|++|.||++.+  ++..|++|.+..... .....+.+|+..+..++|||++++++++...+..++++||
T Consensus         1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06623           1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY   80 (264)
T ss_pred             CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence            3677889999999999999999  689999999876543 3457799999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCC-CCeEEccCCCCCeeEcCCCcEEEccccCceecCC
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFP-RPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE  217 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~-~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~  217 (241)
                      +++++|.+++...     ..+++..+..++.|++.||.|||   + .+++|+||+|+||+++.++.++|+|||++..+..
T Consensus        81 ~~~~~L~~~l~~~-----~~l~~~~~~~~~~~l~~~l~~lh---~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~  152 (264)
T cd06623          81 MDGGSLADLLKKV-----GKIPEPVLAYIARQILKGLDYLH---TKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLEN  152 (264)
T ss_pred             cCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHh---ccCCCccCCCCHHHEEECCCCCEEEccCccceeccc
Confidence            9999999999653     45899999999999999999999   8 9999999999999999999999999999988765


Q ss_pred             CCccccceeecCCceeeeecCC
Q 026214          218 GGTSGAKCLKSERTEICCVREN  239 (241)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~e~  239 (241)
                      ......   ....+..|.+||.
T Consensus       153 ~~~~~~---~~~~~~~y~~pE~  171 (264)
T cd06623         153 TLDQCN---TFVGTVTYMSPER  171 (264)
T ss_pred             CCCccc---ceeecccccCHhh
Confidence            443321   1112334567763

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.94  E-value=1.9e-26  Score=189.25  Aligned_cols=164  Identities=16%  Similarity=0.190  Sum_probs=139.5

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC---cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEe
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR---DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFE  137 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  137 (241)
                      +|...+.||.|+||.||+|.+  ++..||+|.+.....   ...+.+.+|+.++++++||||+++++++..+...++++|
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD   80 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence            477788999999999999998  689999999875432   235678999999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCC
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE  217 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~  217 (241)
                      |+.+++|.+.+...     .++++..+..++.|++.||.|||   ..+++|+||+|+||+++.++.++|+|||++.....
T Consensus        81 ~~~~~~L~~~l~~~-----~~l~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~  152 (258)
T cd05578          81 LLLGGDLRYHLSQK-----VKFSEEQVKFWICEIVLALEYLH---SKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTP  152 (258)
T ss_pred             CCCCCCHHHHHHhc-----CCcCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEEcCCCCEEEeecccccccCC
Confidence            99999999999543     46889999999999999999999   99999999999999999999999999999987755


Q ss_pred             CCccccceeecCCceeeeecC
Q 026214          218 GGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .....    ...++..|.+||
T Consensus       153 ~~~~~----~~~~~~~y~~PE  169 (258)
T cd05578         153 DTLTT----STSGTPGYMAPE  169 (258)
T ss_pred             Ccccc----ccCCChhhcCHH
Confidence            43211    122334566776

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.94  E-value=4.6e-27  Score=205.06  Aligned_cols=163  Identities=18%  Similarity=0.189  Sum_probs=133.9

Q ss_pred             CcCCeeecccceEEEEEEE--CCeEEEEEEeecc----CCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCc--ceEEE
Q 026214           65 DQKNVITEDWGCILYKGFW--QERLISVMRFRES----NRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPI--PILAF  136 (241)
Q Consensus        65 ~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--~~lv~  136 (241)
                      ....+||+|+|-+||+|.+  +|-.||.-.++..    .....++|..|+.+|+.|+||||++++.+|.+...  ..+|+
T Consensus        43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT  122 (632)
T KOG0584|consen   43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT  122 (632)
T ss_pred             ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence            4567899999999999999  7777775444321    22345889999999999999999999999988765  88999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcC-CCcEEEccccCceec
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNE-ENVAKMFDFSLSISI  215 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~-~~~~ki~DfG~a~~~  215 (241)
                      |++..|+|..++.+.     ..++...+..|+.||+.||.|||++ ..+|||||||.+||+|+. -|.+||+|+|||...
T Consensus       123 EL~TSGtLr~Y~kk~-----~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~  196 (632)
T KOG0584|consen  123 ELFTSGTLREYRKKH-----RRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLL  196 (632)
T ss_pred             ecccCCcHHHHHHHh-----ccCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHh
Confidence            999999999999776     3488889999999999999999976 569999999999999975 589999999999876


Q ss_pred             CCCCccccceeecCCceeeeecC
Q 026214          216 PEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ...-...   +  -+|+-.||||
T Consensus       197 r~s~aks---v--IGTPEFMAPE  214 (632)
T KOG0584|consen  197 RKSHAKS---V--IGTPEFMAPE  214 (632)
T ss_pred             hccccce---e--ccCccccChH
Confidence            5443222   2  2445567776

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.94  E-value=8.9e-26  Score=184.89  Aligned_cols=168  Identities=17%  Similarity=0.136  Sum_probs=140.1

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      +|...+.||.|+||.||.+..  ++..|++|.+....  ......+.+|+.++++++||||+++.+++...+..++++||
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY   80 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence            377788999999999999998  78899999987532  22345789999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      +.+++|.+.+...   ....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++..+...
T Consensus        81 ~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~  154 (256)
T cd08218          81 CEGGDLYKKINAQ---RGVLFPEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNST  154 (256)
T ss_pred             CCCCcHHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcc
Confidence            9999999999654   2345789999999999999999999   999999999999999999999999999999877554


Q ss_pred             CccccceeecCCceeeeecCC
Q 026214          219 GTSGAKCLKSERTEICCVREN  239 (241)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~e~  239 (241)
                      .....   ....+..|.+||-
T Consensus       155 ~~~~~---~~~~~~~~~~pe~  172 (256)
T cd08218         155 VELAR---TCIGTPYYLSPEI  172 (256)
T ss_pred             hhhhh---hccCCccccCHHH
Confidence            32211   1112334677773

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.94  E-value=1.3e-25  Score=185.72  Aligned_cols=144  Identities=27%  Similarity=0.378  Sum_probs=123.0

Q ss_pred             CeeecccceEEEEEEE--CCe--EEEEEEeeccC-CcchhhHHHHHHHHHhc-CCCceeeEeeEEecCCcceEEEeeCCC
Q 026214           68 NVITEDWGCILYKGFW--QER--LISVMRFRESN-RDGHGSCINNIVYAAQM-SHDHILKLIGCCLETPIPILAFESVEY  141 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~--~~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~  141 (241)
                      +.||+|+||.||+|.+  ++.  .+++|.+.... ......+.+|+.++.++ +||||+++++++...+..+++|||+++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH   80 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence            3689999999999998  443  56888876532 23345788999999999 899999999999999999999999999


Q ss_pred             CCHHHHHhhcCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEcccc
Q 026214          142 GNLRDRILSASQ-----------PQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFS  210 (241)
Q Consensus       142 gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG  210 (241)
                      ++|.+++.....           .....+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.++++|||
T Consensus        81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~nili~~~~~~kl~dfg  157 (270)
T cd05047          81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFG  157 (270)
T ss_pred             CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccccceEEEcCCCeEEECCCC
Confidence            999999975421           01234789999999999999999999   9999999999999999999999999999


Q ss_pred             Ccee
Q 026214          211 LSIS  214 (241)
Q Consensus       211 ~a~~  214 (241)
                      ++..
T Consensus       158 l~~~  161 (270)
T cd05047         158 LSRG  161 (270)
T ss_pred             Cccc
Confidence            9864

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.94  E-value=5.1e-26  Score=189.22  Aligned_cols=166  Identities=19%  Similarity=0.250  Sum_probs=137.9

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      +|...+.||.|++|.||+|.+  ++..|++|.+....  ......+.+|+.++++++||||+++++++...+..+++|||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF   80 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence            477888999999999999998  78899999886543  22235688999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      +. ++|.+++...   ....+++..+..++.|++.||.|||   ..+++|+||+|+||+++.++.++|+|||++..+...
T Consensus        81 ~~-~~l~~~~~~~---~~~~l~~~~~~~~~~~i~~~l~~lh---~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~  153 (284)
T cd07860          81 LH-QDLKKFMDAS---PLSGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP  153 (284)
T ss_pred             cc-cCHHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEeeccchhhcccC
Confidence            96 6899988654   2456899999999999999999999   999999999999999999999999999999876543


Q ss_pred             CccccceeecCCceeeeecC
Q 026214          219 GTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .....   ....+..|.+||
T Consensus       154 ~~~~~---~~~~~~~y~aPE  170 (284)
T cd07860         154 VRTYT---HEVVTLWYRAPE  170 (284)
T ss_pred             ccccc---cccccccccCCe
Confidence            22111   112234567776

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.94  E-value=6.5e-26  Score=188.32  Aligned_cols=174  Identities=18%  Similarity=0.260  Sum_probs=139.0

Q ss_pred             hcCCCcCCeeecccceEEEEEEE-C-----CeEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEec-CCcc
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW-Q-----ERLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLE-TPIP  132 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~-----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~  132 (241)
                      .++|...+.||+|+||.||+|.+ .     +..|++|.+.... ......+.+|+.+++.++||||+++++++.. +...
T Consensus         5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~   84 (280)
T cd05043           5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP   84 (280)
T ss_pred             hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence            45688889999999999999998 3     5789999886542 2234668899999999999999999998876 4678


Q ss_pred             eEEEeeCCCCCHHHHHhhcCCC---CCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccc
Q 026214          133 ILAFESVEYGNLRDRILSASQP---QTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDF  209 (241)
Q Consensus       133 ~lv~e~~~~gsL~~~l~~~~~~---~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~Df  209 (241)
                      +++++|+++++|.+++......   ....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.+||+||
T Consensus        85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kl~d~  161 (280)
T cd05043          85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLH---KRGVIHKDIAARNCVIDEELQVKITDN  161 (280)
T ss_pred             EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCHhhEEEcCCCcEEECCC
Confidence            9999999999999998664211   1256899999999999999999999   999999999999999999999999999


Q ss_pred             cCceecCCCCccccceeecCCceeeeecC
Q 026214          210 SLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       210 G~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |+++.+.++....... ....+..|++||
T Consensus       162 g~~~~~~~~~~~~~~~-~~~~~~~y~apE  189 (280)
T cd05043         162 ALSRDLFPMDYHCLGD-NENRPVKWMALE  189 (280)
T ss_pred             CCcccccCCceEEeCC-CCCcchhccCHH
Confidence            9998765443221110 111233467777

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.94  E-value=1.2e-25  Score=186.87  Aligned_cols=150  Identities=18%  Similarity=0.291  Sum_probs=131.8

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC-cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeC
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR-DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESV  139 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  139 (241)
                      +|...+.||.|++|.||+|.+  ++..||+|.+..... .....+.+|+.+++.++||||+++++++...+..+++|||+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM   80 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence            477889999999999999998  789999999876532 23456788999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          140 EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       140 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      + ++|.+++....  ....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++++|||++......
T Consensus        81 ~-~~l~~~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~  153 (284)
T cd07836          81 D-KDLKKYMDTHG--VRGALDPNTVKSFTYQLLKGIAFCH---ENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIP  153 (284)
T ss_pred             C-ccHHHHHHhcC--CCCCcCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCC
Confidence            8 58999886542  2346899999999999999999999   999999999999999999999999999999866443

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.94  E-value=1.4e-25  Score=184.48  Aligned_cols=172  Identities=19%  Similarity=0.251  Sum_probs=142.9

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      ++|...+.||.|++|.||+|..  ++..+++|.+.... ......+.+|+.+++.++|+|++++++.+...+..++++|+
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~   80 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY   80 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence            3688889999999999999998  77889999987543 22456789999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      +++++|.+++....  ....+++..+..++.|++.||.|||   +.+++|+||+|+||++++++.++|+|||++..+..+
T Consensus        81 ~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~ql~~al~~lh---~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~  155 (267)
T cd06610          81 LSGGSLLDIMKSSY--PRGGLDEAIIATVLKEVLKGLEYLH---SNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADG  155 (267)
T ss_pred             cCCCcHHHHHHHhc--ccCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccC
Confidence            99999999997641  1246899999999999999999999   999999999999999999999999999999877655


Q ss_pred             Cccc-cceeecCCceeeeecC
Q 026214          219 GTSG-AKCLKSERTEICCVRE  238 (241)
Q Consensus       219 ~~~~-~~~~~~~~~~~~~~~e  238 (241)
                      .... ........+..|++||
T Consensus       156 ~~~~~~~~~~~~~~~~y~~Pe  176 (267)
T cd06610         156 GDRTRKVRKTFVGTPCWMAPE  176 (267)
T ss_pred             ccccccccccccCChhhcChH
Confidence            3321 1111222344567776

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.94  E-value=7.8e-27  Score=189.71  Aligned_cols=172  Identities=22%  Similarity=0.244  Sum_probs=142.7

Q ss_pred             HHHHHHHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhc-CCCceeeEeeEEecCC
Q 026214           54 AQELKLATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQM-SHDHILKLIGCCLETP  130 (241)
Q Consensus        54 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~  130 (241)
                      +.|+-..+     .+.||+|+|+.|-.+..  ++..+|||++.+.......+..+|++++... .|+||++|+.+|.++.
T Consensus        75 F~d~YkLt-----~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~  149 (463)
T KOG0607|consen   75 FEDMYKLT-----SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDT  149 (463)
T ss_pred             HHHHHHhH-----HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccc
Confidence            44544444     56899999999999987  9999999999888666778899999999999 6999999999999999


Q ss_pred             cceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCC---cEEEc
Q 026214          131 IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEEN---VAKMF  207 (241)
Q Consensus       131 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~---~~ki~  207 (241)
                      .+|||||-|.||+|...+.+.     ..+++..+..+..+|+.||.|||   .++|.||||||+|||.....   -+|||
T Consensus       150 ~FYLVfEKm~GGplLshI~~~-----~~F~E~EAs~vvkdia~aLdFlH---~kgIAHRDlKPENiLC~~pn~vsPvKiC  221 (463)
T KOG0607|consen  150 RFYLVFEKMRGGPLLSHIQKR-----KHFNEREASRVVKDIASALDFLH---TKGIAHRDLKPENILCESPNKVSPVKIC  221 (463)
T ss_pred             eEEEEEecccCchHHHHHHHh-----hhccHHHHHHHHHHHHHHHHHHh---hcCcccccCCccceeecCCCCcCceeee
Confidence            999999999999999999665     55999999999999999999999   99999999999999996543   49999


Q ss_pred             cccCceecC--CCCc--cccceeecCCceeeeecC
Q 026214          208 DFSLSISIP--EGGT--SGAKCLKSERTEICCVRE  238 (241)
Q Consensus       208 DfG~a~~~~--~~~~--~~~~~~~~~~~~~~~~~e  238 (241)
                      ||.+..-+.  .+-+  +......+.+..-+||||
T Consensus       222 DfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPE  256 (463)
T KOG0607|consen  222 DFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPE  256 (463)
T ss_pred             ccccccccccCCCCCCCCCccccCcccchhhcchh
Confidence            999886553  2222  111123344445678888

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.94  E-value=7.2e-26  Score=188.86  Aligned_cols=155  Identities=28%  Similarity=0.358  Sum_probs=132.5

Q ss_pred             hcCCCcCCeeecccceEEEEEEE-------CCeEEEEEEeeccCC-cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcc
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW-------QERLISVMRFRESNR-DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIP  132 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  132 (241)
                      .++|.....||.|+||.||++.+       ++..||+|.+..... .....+.+|+.++..++||||+++++++..+...
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~   83 (288)
T cd05050           4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM   83 (288)
T ss_pred             hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence            45688889999999999999986       357899998875432 2345688999999999999999999999999999


Q ss_pred             eEEEeeCCCCCHHHHHhhcCC-----------------CCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCC
Q 026214          133 ILAFESVEYGNLRDRILSASQ-----------------PQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH  195 (241)
Q Consensus       133 ~lv~e~~~~gsL~~~l~~~~~-----------------~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~N  195 (241)
                      ++++||+++++|.+++.....                 .....+++..++.++.|++.||.|||   ..+++|+||+|+|
T Consensus        84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH---~~~i~H~dl~p~n  160 (288)
T cd05050          84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLS---ERKFVHRDLATRN  160 (288)
T ss_pred             EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCeecccccHhh
Confidence            999999999999999974311                 11234788899999999999999999   9999999999999


Q ss_pred             eeEcCCCcEEEccccCceecCCC
Q 026214          196 ILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       196 ill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      |+++.++.++|+|||++..+...
T Consensus       161 il~~~~~~~~l~dfg~~~~~~~~  183 (288)
T cd05050         161 CLVGENMVVKIADFGLSRNIYSA  183 (288)
T ss_pred             eEecCCCceEECccccceecccC
Confidence            99999999999999999876443

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.94  E-value=1.3e-25  Score=189.17  Aligned_cols=149  Identities=20%  Similarity=0.300  Sum_probs=130.5

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC---cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR---DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      ..|...+.||+|+||.||+|..  ++..||+|.+.....   .....+.+|+.+++.++||||+++.+++...+..++|+
T Consensus        15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~   94 (307)
T cd06607          15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM   94 (307)
T ss_pred             hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence            4477888999999999999998  789999999865432   22356889999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||+. |+|.+++...    ...+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++....
T Consensus        95 e~~~-g~l~~~~~~~----~~~l~~~~~~~~~~ql~~~L~~LH---~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~  166 (307)
T cd06607          95 EYCL-GSASDILEVH----KKPLQEVEIAAICHGALQGLAYLH---SHERIHRDIKAGNILLTEPGTVKLADFGSASLVS  166 (307)
T ss_pred             HhhC-CCHHHHHHHc----ccCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEECCCCCEEEeecCcceecC
Confidence            9997 6888887543    345899999999999999999999   9999999999999999999999999999998765


Q ss_pred             CC
Q 026214          217 EG  218 (241)
Q Consensus       217 ~~  218 (241)
                      +.
T Consensus       167 ~~  168 (307)
T cd06607         167 PA  168 (307)
T ss_pred             CC
Confidence            44

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.94  E-value=1.6e-26  Score=189.91  Aligned_cols=143  Identities=20%  Similarity=0.297  Sum_probs=123.0

Q ss_pred             CeeecccceEEEEEEE--CC-------eEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           68 NVITEDWGCILYKGFW--QE-------RLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~--~~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      +.||.|+||.||+|..  .+       ..+++|.+........+.+.+|+.+++.++||||+++++++..+...++||||
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   80 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY   80 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence            3689999999999987  22       34888887655444456788999999999999999999999998999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCc--------EEEcccc
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENV--------AKMFDFS  210 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~--------~ki~DfG  210 (241)
                      +++|+|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+||+++.++.        ++++|||
T Consensus        81 ~~~g~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g  153 (258)
T cd05078          81 VKFGSLDTYLKKN----KNLINISWKLEVAKQLAWALHFLE---DKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPG  153 (258)
T ss_pred             CCCCcHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEEEecccccccCCCceEEecccc
Confidence            9999999999664    235889999999999999999999   999999999999999987654        6999999


Q ss_pred             CceecCC
Q 026214          211 LSISIPE  217 (241)
Q Consensus       211 ~a~~~~~  217 (241)
                      ++....+
T Consensus       154 ~~~~~~~  160 (258)
T cd05078         154 ISITVLP  160 (258)
T ss_pred             cccccCC
Confidence            9876544

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.94  E-value=1.3e-25  Score=189.30  Aligned_cols=167  Identities=19%  Similarity=0.249  Sum_probs=137.6

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC--cchhhHHHHHHHHHhcCCCceeeEeeEEecC--CcceE
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR--DGHGSCINNIVYAAQMSHDHILKLIGCCLET--PIPIL  134 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l  134 (241)
                      .++|...+.||.|+||.||+|.+  ++..||+|.+.....  .....+.+|+.++.+++|+||+++++++...  +..++
T Consensus         6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (309)
T cd07845           6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL   85 (309)
T ss_pred             ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence            46788899999999999999998  789999999875432  1233567899999999999999999998765  46899


Q ss_pred             EEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCcee
Q 026214          135 AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSIS  214 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~  214 (241)
                      ||||+. ++|.+++...    ...+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++..
T Consensus        86 v~e~~~-~~l~~~l~~~----~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~  157 (309)
T cd07845          86 VMEYCE-QDLASLLDNM----PTPFSESQVKCLMLQLLRGLQYLH---ENFIIHRDLKVSNLLLTDKGCLKIADFGLART  157 (309)
T ss_pred             EEecCC-CCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECccceeee
Confidence            999997 5899888654    356899999999999999999999   99999999999999999999999999999998


Q ss_pred             cCCCCccccceeecCCceeeeecC
Q 026214          215 IPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +........   ....+..|++||
T Consensus       158 ~~~~~~~~~---~~~~~~~y~aPE  178 (309)
T cd07845         158 YGLPAKPMT---PKVVTLWYRAPE  178 (309)
T ss_pred             cCCccCCCC---cccccccccChh
Confidence            765432211   112244577887

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=5.8e-28  Score=210.96  Aligned_cols=164  Identities=17%  Similarity=0.173  Sum_probs=141.0

Q ss_pred             CcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCCCC
Q 026214           65 DQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYG  142 (241)
Q Consensus        65 ~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g  142 (241)
                      .+...||.|+||.||++..  ++...|.|.+..........|+-||++|+.++||+||+|++.|+..+.+|++.|||.||
T Consensus        35 eIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GG  114 (1187)
T KOG0579|consen   35 EIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGG  114 (1187)
T ss_pred             HHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCc
Confidence            3345789999999999998  56667888888777778899999999999999999999999999999999999999999


Q ss_pred             CHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCccc
Q 026214          143 NLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSG  222 (241)
Q Consensus       143 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~~  222 (241)
                      -.+..+...    ..++++..+.-+++|++.||.|||   +.+|||||||+.|||++-+|.++++|||++..........
T Consensus       115 AVDaimlEL----~r~LtE~QIqvvc~q~ldALn~LH---s~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkR  187 (1187)
T KOG0579|consen  115 AVDAIMLEL----GRVLTEDQIQVVCYQVLDALNWLH---SQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKR  187 (1187)
T ss_pred             hHhHHHHHh----ccccchHHHHHHHHHHHHHHHHHh---hcchhhhhccccceEEEecCcEeeecccccccchhHHhhh
Confidence            999888775    567999999999999999999999   9999999999999999999999999999987654433222


Q ss_pred             cceeecCCceeeeecC
Q 026214          223 AKCLKSERTEICCVRE  238 (241)
Q Consensus       223 ~~~~~~~~~~~~~~~e  238 (241)
                      .+.   -+++-|+|||
T Consensus       188 DsF---IGTPYWMAPE  200 (1187)
T KOG0579|consen  188 DSF---IGTPYWMAPE  200 (1187)
T ss_pred             ccc---cCCcccccch
Confidence            222   2445568887

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.94  E-value=3.2e-26  Score=188.33  Aligned_cols=164  Identities=17%  Similarity=0.194  Sum_probs=139.2

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeC
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESV  139 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  139 (241)
                      +|...+.||.|++|.||++.+  ++..+++|.+.... .....++.+|+.+++.++||||+++++++...+..++++||+
T Consensus         2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   81 (265)
T cd06605           2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM   81 (265)
T ss_pred             cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence            466678999999999999999  68899999987653 234467899999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCC-CCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          140 EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFP-RPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       140 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~-~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      ++++|.+++...    ...+++..+..++.|++.||.|||   + .+++|+||+|+||+++.++.++|+|||.+..+..+
T Consensus        82 ~~~~L~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lH---~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~  154 (265)
T cd06605          82 DGGSLDKILKEV----QGRIPERILGKIAVAVLKGLTYLH---EKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNS  154 (265)
T ss_pred             CCCcHHHHHHHc----cCCCCHHHHHHHHHHHHHHHHHHc---CCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHH
Confidence            999999999654    256889999999999999999999   7 89999999999999999999999999999766433


Q ss_pred             CccccceeecCCceeeeecC
Q 026214          219 GTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ....     ...+..|++||
T Consensus       155 ~~~~-----~~~~~~y~~PE  169 (265)
T cd06605         155 LAKT-----FVGTSSYMAPE  169 (265)
T ss_pred             Hhhc-----ccCChhccCHH
Confidence            2211     22334567777

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.94  E-value=1.6e-25  Score=183.21  Aligned_cols=167  Identities=21%  Similarity=0.213  Sum_probs=139.4

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      +|...+.||+|++|.||++..  ++..+|+|.+....  ......+.+|+.+++.++|||++++++.+...+..++++||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY   80 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence            477788999999999999998  78899999987542  22356788999999999999999999999989999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCC-CcEEEccccCceecCC
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEE-NVAKMFDFSLSISIPE  217 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~-~~~ki~DfG~a~~~~~  217 (241)
                      +++++|.+++...   ....+++..+..++.+++.||.|||   +.+++|+||+|+||+++.+ +.++++|||++..+..
T Consensus        81 ~~~~~L~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~  154 (256)
T cd08220          81 APGGTLAEYIQKR---CNSLLDEDTILHFFVQILLALHHVH---TKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSS  154 (256)
T ss_pred             CCCCCHHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCC
Confidence            9999999999764   2345899999999999999999999   9999999999999999854 5689999999998765


Q ss_pred             CCccccceeecCCceeeeecCC
Q 026214          218 GGTSGAKCLKSERTEICCVREN  239 (241)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~e~  239 (241)
                      .....    ....+..|++||-
T Consensus       155 ~~~~~----~~~~~~~y~aPE~  172 (256)
T cd08220         155 KSKAY----TVVGTPCYISPEL  172 (256)
T ss_pred             Ccccc----ccccCCcccCchh
Confidence            43221    1223446777773

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.94  E-value=1e-25  Score=187.03  Aligned_cols=142  Identities=18%  Similarity=0.237  Sum_probs=125.8

Q ss_pred             eecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCCCCCH
Q 026214           70 ITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNL  144 (241)
Q Consensus        70 lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL  144 (241)
                      ||+|+||.||+|.+  ++..+|+|.+....   ......+.+|+.+++.++||||+++.+++...+..+++|||+++++|
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL   80 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence            68999999999987  78899999987532   12345578899999999999999999999999999999999999999


Q ss_pred             HHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCC
Q 026214          145 RDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE  217 (241)
Q Consensus       145 ~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~  217 (241)
                      .+++...   ....+++..+..++.|++.||.|||   ..+++|+||+|+||+++.++.++|+|||++.....
T Consensus        81 ~~~l~~~---~~~~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~  147 (277)
T cd05577          81 KYHIYNV---GEPGFPEARAIFYAAQIICGLEHLH---QRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKG  147 (277)
T ss_pred             HHHHHHc---CcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEccCcchhhhcc
Confidence            9999765   2246899999999999999999999   99999999999999999999999999999986643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=9.2e-26  Score=186.18  Aligned_cols=172  Identities=19%  Similarity=0.192  Sum_probs=141.6

Q ss_pred             HHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhc-CCCceeeEeeEEecCC-----
Q 026214           59 LATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQM-SHDHILKLIGCCLETP-----  130 (241)
Q Consensus        59 ~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~-----  130 (241)
                      .++++|...+.||.|++|.||+|.+  ++..+++|.+..... ....+.+|+.+++++ +||||+++++++....     
T Consensus         3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~   81 (275)
T cd06608           3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND   81 (275)
T ss_pred             CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence            3567899999999999999999998  678899998876542 346789999999999 7999999999997644     


Q ss_pred             -cceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccc
Q 026214          131 -IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDF  209 (241)
Q Consensus       131 -~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~Df  209 (241)
                       ..+++|||+++++|.+++..... ....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+||
T Consensus        82 ~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~~ql~~al~~lH---~~~i~H~~l~p~ni~~~~~~~~~l~d~  157 (275)
T cd06608          82 DQLWLVMELCGGGSVTDLVKGLRK-KGKRLKEEWIAYILRETLRGLAYLH---ENKVIHRDIKGQNILLTKNAEVKLVDF  157 (275)
T ss_pred             eEEEEEEEcCCCCcHHHHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEEccCCeEEECCC
Confidence             48999999999999999865421 2356899999999999999999999   999999999999999999999999999


Q ss_pred             cCceecCCCCccccceeecCCceeeeecC
Q 026214          210 SLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       210 G~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |++..........   .....+..|++||
T Consensus       158 ~~~~~~~~~~~~~---~~~~~~~~y~aPE  183 (275)
T cd06608         158 GVSAQLDSTLGRR---NTFIGTPYWMAPE  183 (275)
T ss_pred             ccceecccchhhh---cCccccccccCHh
Confidence            9998765432221   1222444577776

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.94  E-value=3.3e-28  Score=191.31  Aligned_cols=165  Identities=21%  Similarity=0.243  Sum_probs=138.1

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeecc--CCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEe
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRES--NRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFE  137 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  137 (241)
                      +.|+.-+.||+|.|+.||++.+  +|+.+|+|.+...  ...+.+.+.+|+.+-+.|+||||++|...+.+....|+|||
T Consensus        11 d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe   90 (355)
T KOG0033|consen   11 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD   90 (355)
T ss_pred             hhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEe
Confidence            4566678999999999999998  8888888877543  23356789999999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEc---CCCcEEEccccCcee
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFN---EENVAKMFDFSLSIS  214 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~---~~~~~ki~DfG~a~~  214 (241)
                      +|.|++|..-+...     -..++..+..++.||+.+|.|+|   .++|||||+||.|+|+-   ..--+|++|||+|..
T Consensus        91 ~m~G~dl~~eIV~R-----~~ySEa~aSH~~rQiLeal~yCH---~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~  162 (355)
T KOG0033|consen   91 LVTGGELFEDIVAR-----EFYSEADASHCIQQILEALAYCH---SNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIE  162 (355)
T ss_pred             cccchHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeeeeccCCCceeecccceEEE
Confidence            99999998877543     34788899999999999999999   99999999999999994   345699999999999


Q ss_pred             cCCCCccccceeecCCceeeeecC
Q 026214          215 IPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +. ++...   ..-.+++.|++||
T Consensus       163 l~-~g~~~---~G~~GtP~fmaPE  182 (355)
T KOG0033|consen  163 VN-DGEAW---HGFAGTPGYLSPE  182 (355)
T ss_pred             eC-Ccccc---ccccCCCcccCHH
Confidence            88 33222   2333556677887

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.94  E-value=2.7e-25  Score=180.58  Aligned_cols=149  Identities=22%  Similarity=0.339  Sum_probs=135.5

Q ss_pred             CCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCCC
Q 026214           64 YDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEY  141 (241)
Q Consensus        64 ~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~  141 (241)
                      |...+.||.|++|.||++.+  ++..+++|++..........+.+|+.+++.++|||++++.+++..+...++++||+++
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~   81 (253)
T cd05122           2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSG   81 (253)
T ss_pred             ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCC
Confidence            66778999999999999998  6889999999876544567899999999999999999999999999999999999999


Q ss_pred             CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCC
Q 026214          142 GNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGG  219 (241)
Q Consensus       142 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~  219 (241)
                      ++|.+++...    ...+++..+..++.|++.||.+||   ..+++|+||+|+||+++.++.++|+|||++.......
T Consensus        82 ~~L~~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~  152 (253)
T cd05122          82 GSLKDLLKST----NQTLTESQIAYVCKELLKGLEYLH---SNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTK  152 (253)
T ss_pred             CcHHHHHhhc----CCCCCHHHHHHHHHHHHHHHHHhh---cCCEecCCCCHHHEEEccCCeEEEeeccccccccccc
Confidence            9999999664    256899999999999999999999   8999999999999999999999999999998876654

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.93  E-value=1.6e-25  Score=187.80  Aligned_cols=153  Identities=22%  Similarity=0.251  Sum_probs=131.5

Q ss_pred             HHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEecCC----
Q 026214           59 LATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLETP----  130 (241)
Q Consensus        59 ~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----  130 (241)
                      ...++|...+.||+|++|.||+|.+  ++..||+|.+....  ......+.+|+.+++.++||||+++++++.+..    
T Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~   83 (302)
T cd07864           4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD   83 (302)
T ss_pred             hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence            3456788899999999999999999  68899999987543  223356778999999999999999999987654    


Q ss_pred             ------cceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcE
Q 026214          131 ------IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVA  204 (241)
Q Consensus       131 ------~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~  204 (241)
                            ..++++||+++ ++.+.+...    ...+++..+..++.|++.||.|||   +.+|+|+||+|+||+++.++.+
T Consensus        84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~  155 (302)
T cd07864          84 FKKDKGAFYLVFEYMDH-DLMGLLESG----LVHFSEDHIKSFMKQLLEGLNYCH---KKNFLHRDIKCSNILLNNKGQI  155 (302)
T ss_pred             ccccCCcEEEEEcccCc-cHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCcE
Confidence                  78999999985 787777543    345899999999999999999999   9999999999999999999999


Q ss_pred             EEccccCceecCCCC
Q 026214          205 KMFDFSLSISIPEGG  219 (241)
Q Consensus       205 ki~DfG~a~~~~~~~  219 (241)
                      ||+|||++..+....
T Consensus       156 kl~dfg~~~~~~~~~  170 (302)
T cd07864         156 KLADFGLARLYNSEE  170 (302)
T ss_pred             EeCcccccccccCCc
Confidence            999999998775543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=2.2e-25  Score=181.84  Aligned_cols=165  Identities=22%  Similarity=0.318  Sum_probs=141.1

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC--cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR--DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      +|...+.||+|++|.||++..  ++..|++|.+.....  .....+.+|+.++.+++|||++++++++...+..++++||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY   80 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence            366788999999999999988  678999999876643  3456789999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      +++++|.+++...     ..+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++......
T Consensus        81 ~~~~~L~~~~~~~-----~~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~  152 (254)
T cd06627          81 AENGSLRQIIKKF-----GPFPESLVAVYVYQVLQGLAYLH---EQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDV  152 (254)
T ss_pred             CCCCcHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEECCCCCEEEeccccceecCCC
Confidence            9999999999554     45899999999999999999999   999999999999999999999999999999987654


Q ss_pred             CccccceeecCCceeeeecC
Q 026214          219 GTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ...   ......+..|++||
T Consensus       153 ~~~---~~~~~~~~~y~~pe  169 (254)
T cd06627         153 SKD---DASVVGTPYWMAPE  169 (254)
T ss_pred             ccc---ccccccchhhcCHh
Confidence            432   11222344577777

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.93  E-value=2e-25  Score=186.31  Aligned_cols=168  Identities=20%  Similarity=0.215  Sum_probs=137.4

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC-cchhhHHHHHHHHHhcCCCceeeEeeEEecC--CcceEEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR-DGHGSCINNIVYAAQMSHDHILKLIGCCLET--PIPILAF  136 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~  136 (241)
                      ++|...+.||.|++|.||++.+  ++..+|+|.+..... .....+.+|+.+++.++||||+++++++...  +..+++|
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   80 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM   80 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence            3577788999999999999999  789999999875432 2346789999999999999999999988653  4689999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||+++++|.+++..... ....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++....
T Consensus        81 e~~~~~~L~~~l~~~~~-~~~~l~~~~~~~i~~~i~~~L~~lH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~  156 (287)
T cd06621          81 EYCEGGSLDSIYKKVKK-RGGRIGEKVLGKIAESVLKGLSYLH---SRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELV  156 (287)
T ss_pred             EecCCCCHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEecCCeEEEeecccccccc
Confidence            99999999998764311 2455888999999999999999999   9999999999999999999999999999987654


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .....     ....+..|.+||
T Consensus       157 ~~~~~-----~~~~~~~y~~pE  173 (287)
T cd06621         157 NSLAG-----TFTGTSFYMAPE  173 (287)
T ss_pred             ccccc-----cccCCccccCHH
Confidence            33211     112344567776

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.93  E-value=3.5e-26  Score=204.94  Aligned_cols=173  Identities=13%  Similarity=0.110  Sum_probs=130.0

Q ss_pred             HhcCCCcCCeeecccceEEEEEEE---CCeEEEEEEe--------------ec---cCCcchhhHHHHHHHHHhcCCCce
Q 026214           60 ATNNYDQKNVITEDWGCILYKGFW---QERLISVMRF--------------RE---SNRDGHGSCINNIVYAAQMSHDHI  119 (241)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~---~~~~vavK~~--------------~~---~~~~~~~~~~~E~~~l~~l~h~ni  119 (241)
                      ....|...+.||+|+||.||+|..   .+..++.|.+              .+   ........+.+|+.++..++||||
T Consensus       146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI  225 (501)
T PHA03210        146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI  225 (501)
T ss_pred             hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence            346799999999999999999876   2222222211              00   111123457899999999999999


Q ss_pred             eeEeeEEecCCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEc
Q 026214          120 LKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFN  199 (241)
Q Consensus       120 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~  199 (241)
                      +++++++...+..+++++++. ++|.+++...............+..++.|++.||.|||   +.+|+||||||+|||++
T Consensus       226 v~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH---~~gIiHrDLKP~NILl~  301 (501)
T PHA03210        226 LKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIH---DKKLIHRDIKLENIFLN  301 (501)
T ss_pred             CcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEC
Confidence            999999999999999999986 58888775542111222345667789999999999999   99999999999999999


Q ss_pred             CCCcEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          200 EENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       200 ~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .++.+||+|||+++.+..+.......  ..++..|++||
T Consensus       302 ~~~~vkL~DFGla~~~~~~~~~~~~~--~~gt~~y~aPE  338 (501)
T PHA03210        302 CDGKIVLGDFGTAMPFEKEREAFDYG--WVGTVATNSPE  338 (501)
T ss_pred             CCCCEEEEeCCCceecCccccccccc--ccCCcCCCCch
Confidence            99999999999999876543322221  23455677887

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.93  E-value=2.3e-25  Score=185.88  Aligned_cols=163  Identities=18%  Similarity=0.230  Sum_probs=137.3

Q ss_pred             CCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCCC
Q 026214           64 YDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEY  141 (241)
Q Consensus        64 ~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~  141 (241)
                      |..-+.||.|++|.||++.+  ++..+++|.+........+.+.+|+.++..++||||+++++++...+..++++||+++
T Consensus        21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~  100 (285)
T cd06648          21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG  100 (285)
T ss_pred             hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence            44457999999999999987  7789999988765544556788999999999999999999999999999999999999


Q ss_pred             CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCcc
Q 026214          142 GNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTS  221 (241)
Q Consensus       142 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~  221 (241)
                      ++|.+++..      ..+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++++|||++.....+...
T Consensus       101 ~~L~~~~~~------~~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~  171 (285)
T cd06648         101 GALTDIVTH------TRMNEEQIATVCLAVLKALSFLH---AQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPR  171 (285)
T ss_pred             CCHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCcc
Confidence            999999844      34788999999999999999999   999999999999999999999999999998766543221


Q ss_pred             ccceeecCCceeeeecC
Q 026214          222 GAKCLKSERTEICCVRE  238 (241)
Q Consensus       222 ~~~~~~~~~~~~~~~~e  238 (241)
                      .   ....++..|++||
T Consensus       172 ~---~~~~~~~~y~aPE  185 (285)
T cd06648         172 R---KSLVGTPYWMAPE  185 (285)
T ss_pred             c---ccccCCccccCHH
Confidence            1   1122345677777

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.93  E-value=8e-26  Score=188.32  Aligned_cols=147  Identities=18%  Similarity=0.218  Sum_probs=130.0

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      ++|...+.||+|+||.||++.+  ++..||+|.+.... ....+.+.+|+.++..++||||+++++++...+..++|+||
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF   84 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence            3466678999999999999998  68899999876543 23356789999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCC-CCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFP-RPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~-~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      +++++|.+++...     +.+++..+..++.+++.||.|||   + .+++|+||+|+||+++.++.++|+|||++....
T Consensus        85 ~~~~~L~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~LH---~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~  155 (284)
T cd06620          85 MDCGSLDRIYKKG-----GPIPVEILGKIAVAVVEGLTYLY---NVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELI  155 (284)
T ss_pred             CCCCCHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHH---HhcCeeccCCCHHHEEECCCCcEEEccCCcccchh
Confidence            9999999988553     35899999999999999999999   6 589999999999999999999999999987653

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.93  E-value=3.1e-25  Score=185.59  Aligned_cols=150  Identities=21%  Similarity=0.284  Sum_probs=128.5

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC--cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEe
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR--DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFE  137 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  137 (241)
                      ++|...+.||.|++|.||+|.+  ++..|++|.+.....  .....+.+|+.+++.++||||+++++++......++|||
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   81 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE   81 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence            4678889999999999999998  788999998865432  234568899999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcC-CCcEEEccccCceecC
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNE-ENVAKMFDFSLSISIP  216 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~-~~~~ki~DfG~a~~~~  216 (241)
                      |++ ++|.+.+...   .....++..+..++.|++.||.|||   +.+++|+||+|+||+++. ++.+||+|||++....
T Consensus        82 ~~~-~~l~~~~~~~---~~~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~  154 (294)
T PLN00009         82 YLD-LDLKKHMDSS---PDFAKNPRLIKTYLYQILRGIAYCH---SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFG  154 (294)
T ss_pred             ccc-ccHHHHHHhC---CCCCcCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCcceEEEECCCCEEEEcccccccccC
Confidence            996 5888888554   2334678888899999999999999   999999999999999985 5679999999998765


Q ss_pred             CC
Q 026214          217 EG  218 (241)
Q Consensus       217 ~~  218 (241)
                      .+
T Consensus       155 ~~  156 (294)
T PLN00009        155 IP  156 (294)
T ss_pred             CC
Confidence            43

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.93  E-value=1e-25  Score=187.54  Aligned_cols=167  Identities=23%  Similarity=0.267  Sum_probs=137.9

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEe
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFE  137 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  137 (241)
                      ++|+..+.||+|++|.||+|.+  ++..|++|.+....  ......+.+|+.+++.++|+||+++++++...+..++++|
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e   80 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE   80 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence            3578889999999999999998  67899999886532  2334678999999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCC
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE  217 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~  217 (241)
                      |++++.+..+...     ...+++..+..++.|++.||.|||   ..+++|+||+|+||+++.++.++|+|||++..+..
T Consensus        81 ~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~  152 (288)
T cd07833          81 YVERTLLELLEAS-----PGGLPPDAVRSYIWQLLQAIAYCH---SHNIIHRDIKPENILVSESGVLKLCDFGFARALRA  152 (288)
T ss_pred             cCCCCHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEEeeecccccCC
Confidence            9997666555432     344899999999999999999999   99999999999999999999999999999988765


Q ss_pred             CCccccceeecCCceeeeecC
Q 026214          218 GGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .......  ....+..|.+||
T Consensus       153 ~~~~~~~--~~~~~~~~~~PE  171 (288)
T cd07833         153 RPASPLT--DYVATRWYRAPE  171 (288)
T ss_pred             Ccccccc--CcccccCCcCCc
Confidence            5431111  122345577777

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.93  E-value=3.5e-25  Score=180.74  Aligned_cols=170  Identities=20%  Similarity=0.247  Sum_probs=143.4

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC--cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR--DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      +|...+.||.|++|.||++.+  ++..+++|.+.....  .....+.+|+++++.++|||++++.+.+...+..++++||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~   80 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY   80 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence            467778999999999999999  689999999876532  3456788999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      +++++|.+++..... ....+++..+..++.+++.||.|||   ..+++|+||+|+||+++.++.++|+|||++......
T Consensus        81 ~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lh---~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~  156 (258)
T cd08215          81 ADGGDLSQKIKKQKK-EGKPFPEEQILDWFVQLCLALKYLH---SRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSST  156 (258)
T ss_pred             cCCCcHHHHHHHhhc-cCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHHeEEcCCCcEEECCccceeecccC
Confidence            999999999976521 2366899999999999999999999   899999999999999999999999999999887665


Q ss_pred             CccccceeecCCceeeeecCC
Q 026214          219 GTSGAKCLKSERTEICCVREN  239 (241)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~e~  239 (241)
                      ....   ....++..|++||.
T Consensus       157 ~~~~---~~~~~~~~y~~pe~  174 (258)
T cd08215         157 VDLA---KTVVGTPYYLSPEL  174 (258)
T ss_pred             ccee---cceeeeecccChhH
Confidence            4111   12234456778873

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.93  E-value=2.4e-25  Score=187.10  Aligned_cols=170  Identities=19%  Similarity=0.255  Sum_probs=136.4

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC--cchhhHHHHHHHHHhcCCCceeeEeeEEecCC------
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR--DGHGSCINNIVYAAQMSHDHILKLIGCCLETP------  130 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------  130 (241)
                      .++|...++||+|+||.||+|..  ++..||+|.+.....  .....+.+|+.++++++||||+++++++...+      
T Consensus        11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   90 (310)
T cd07865          11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY   90 (310)
T ss_pred             hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence            35688899999999999999998  789999998865421  22345678999999999999999999987654      


Q ss_pred             --cceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEcc
Q 026214          131 --IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFD  208 (241)
Q Consensus       131 --~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~D  208 (241)
                        ..+++|||+. ++|.+.+...    ...+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|
T Consensus        91 ~~~~~lv~e~~~-~~l~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~d  162 (310)
T cd07865          91 KGSFYLVFEFCE-HDLAGLLSNK----NVKFTLSEIKKVMKMLLNGLYYIH---RNKILHRDMKAANILITKDGILKLAD  162 (310)
T ss_pred             CceEEEEEcCCC-cCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEECCCCcEEECc
Confidence              3499999997 5888888554    345899999999999999999999   89999999999999999999999999


Q ss_pred             ccCceecCCCCccccc-eeecCCceeeeecC
Q 026214          209 FSLSISIPEGGTSGAK-CLKSERTEICCVRE  238 (241)
Q Consensus       209 fG~a~~~~~~~~~~~~-~~~~~~~~~~~~~e  238 (241)
                      ||++..+......... ......+..|.+||
T Consensus       163 fg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE  193 (310)
T cd07865         163 FGLARAFSLSKNSKPNRYTNRVVTLWYRPPE  193 (310)
T ss_pred             CCCcccccCCcccCCCCccCcccCccccCcH
Confidence            9999877543322111 11122344577887

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.93  E-value=9.8e-26  Score=192.63  Aligned_cols=148  Identities=16%  Similarity=0.081  Sum_probs=117.9

Q ss_pred             HHHHHHHhcCCCcCCeeecccceEEEEEEE---CCeEEEEEEeeccC-----CcchhhHHHHHHHHHhcCCCceeeEeeE
Q 026214           54 AQELKLATNNYDQKNVITEDWGCILYKGFW---QERLISVMRFRESN-----RDGHGSCINNIVYAAQMSHDHILKLIGC  125 (241)
Q Consensus        54 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~---~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~  125 (241)
                      .+.+....+.|...+.||+|+||.||+|.+   ++..||||++....     ......+.+|+.++..++|+|+++.+..
T Consensus        10 ~~~~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~   89 (365)
T PRK09188         10 GDQIPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA   89 (365)
T ss_pred             ccccccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE
Confidence            344456668899999999999999999987   56778999865331     1124568999999999999999853322


Q ss_pred             EecCCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccC-CCCCeeEcCCCcE
Q 026214          126 CLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDF-KTAHILFNEENVA  204 (241)
Q Consensus       126 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dl-k~~Nill~~~~~~  204 (241)
                         .+..++||||+++++|.. + ..       ..   ...++.+++.||.|||   +.+|+|||| ||+|||++.++.+
T Consensus        90 ---~~~~~LVmE~~~G~~L~~-~-~~-------~~---~~~~~~~i~~aL~~lH---~~gIiHrDL~KP~NILv~~~~~i  151 (365)
T PRK09188         90 ---TGKDGLVRGWTEGVPLHL-A-RP-------HG---DPAWFRSAHRALRDLH---RAGITHNDLAKPQNWLMGPDGEA  151 (365)
T ss_pred             ---cCCcEEEEEccCCCCHHH-h-Cc-------cc---hHHHHHHHHHHHHHHH---HCCCeeCCCCCcceEEEcCCCCE
Confidence               246899999999999963 2 11       11   1367889999999999   999999999 9999999999999


Q ss_pred             EEccccCceecCCCC
Q 026214          205 KMFDFSLSISIPEGG  219 (241)
Q Consensus       205 ki~DfG~a~~~~~~~  219 (241)
                      +|+|||+|+.+...+
T Consensus       152 kLiDFGlA~~~~~~~  166 (365)
T PRK09188        152 AVIDFQLASVFRRRG  166 (365)
T ss_pred             EEEECccceecccCc
Confidence            999999999886654

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.93  E-value=4.6e-27  Score=218.21  Aligned_cols=173  Identities=18%  Similarity=0.176  Sum_probs=147.0

Q ss_pred             HHHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeecc--CCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcce
Q 026214           58 KLATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRES--NRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPI  133 (241)
Q Consensus        58 ~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  133 (241)
                      ...+-++.....||.|.||.||.|..  +|...|+|-+...  .....+...+|+.++..++|||+|+++|+-.+.+..+
T Consensus      1231 snV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~ 1310 (1509)
T KOG4645|consen 1231 SNVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVY 1310 (1509)
T ss_pred             ccceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHH
Confidence            34455667788999999999999998  8888999976543  3344567889999999999999999999999999999


Q ss_pred             EEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCce
Q 026214          134 LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSI  213 (241)
Q Consensus       134 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~  213 (241)
                      +.||||.+|+|.+++...     ...++....-+..|++.|+.|||   +.+||||||||.||+++.+|.+|.+|||.|.
T Consensus      1311 IFMEyC~~GsLa~ll~~g-----ri~dE~vt~vyt~qll~gla~LH---~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ 1382 (1509)
T KOG4645|consen 1311 IFMEYCEGGSLASLLEHG-----RIEDEMVTRVYTKQLLEGLAYLH---EHGIVHRDIKPANILLDFNGLIKYGDFGSAV 1382 (1509)
T ss_pred             HHHHHhccCcHHHHHHhc-----chhhhhHHHHHHHHHHHHHHHHH---hcCceecCCCccceeeecCCcEEeeccccee
Confidence            999999999999999554     34777777889999999999999   9999999999999999999999999999999


Q ss_pred             ecCCCCccccce-eecCCceeeeecC
Q 026214          214 SIPEGGTSGAKC-LKSERTEICCVRE  238 (241)
Q Consensus       214 ~~~~~~~~~~~~-~~~~~~~~~~~~e  238 (241)
                      .+.++-...... -...+|+.|+|||
T Consensus      1383 ki~~~~~~~~~el~~~~GT~~YMAPE 1408 (1509)
T KOG4645|consen 1383 KIKNNAQTMPGELQSMMGTPMYMAPE 1408 (1509)
T ss_pred             EecCchhcCCHHHHhhcCCchhcCch
Confidence            987764222222 3445888999998

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.93  E-value=3.2e-25  Score=183.28  Aligned_cols=152  Identities=18%  Similarity=0.314  Sum_probs=126.3

Q ss_pred             CCcCCeeecccceEEEEEEE-----CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEecCC------
Q 026214           64 YDQKNVITEDWGCILYKGFW-----QERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLETP------  130 (241)
Q Consensus        64 ~~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------  130 (241)
                      |...+.||+|+||.||+|.+     ++..||+|.+....  ....+++.+|+.+++.++||||+++++++....      
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   80 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP   80 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence            45677899999999999986     46889999987542  223567889999999999999999999886532      


Q ss_pred             cceEEEeeCCCCCHHHHHhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccc
Q 026214          131 IPILAFESVEYGNLRDRILSASQ-PQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDF  209 (241)
Q Consensus       131 ~~~lv~e~~~~gsL~~~l~~~~~-~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~Df  209 (241)
                      ..+++++|+.+|+|.+++..... .....+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.++++||
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~nili~~~~~~kl~df  157 (273)
T cd05074          81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLS---SKNFIHRDLAARNCMLNENMTVCVADF  157 (273)
T ss_pred             ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccchhhEEEcCCCCEEECcc
Confidence            24788899999999988754321 12335788999999999999999999   999999999999999999999999999


Q ss_pred             cCceecCCC
Q 026214          210 SLSISIPEG  218 (241)
Q Consensus       210 G~a~~~~~~  218 (241)
                      |+++.+..+
T Consensus       158 g~~~~~~~~  166 (273)
T cd05074         158 GLSKKIYSG  166 (273)
T ss_pred             cccccccCC
Confidence            999877543

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.93  E-value=3.1e-25  Score=184.26  Aligned_cols=165  Identities=21%  Similarity=0.240  Sum_probs=137.1

Q ss_pred             CCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEecC--CcceEEEe
Q 026214           64 YDQKNVITEDWGCILYKGFW--QERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLET--PIPILAFE  137 (241)
Q Consensus        64 ~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~e  137 (241)
                      |...+.||.|++|.||+|..  ++..+++|.+....  ......+.+|+.+++.++|||++++++++...  +..++++|
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e   80 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE   80 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence            45678899999999999998  67899999998753  23345688999999999999999999999887  88999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCC
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE  217 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~  217 (241)
                      |++ ++|.+++...    ...+++..+..++.|++.||.|||   ..+++|+||+|+||++++++.++|+|||++.....
T Consensus        81 ~~~-~~l~~~~~~~----~~~~~~~~~~~i~~~i~~al~~LH---~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~  152 (287)
T cd07840          81 YMD-HDLTGLLDSP----EVKFTESQIKCYMKQLLEGLQYLH---SNGILHRDIKGSNILINNDGVLKLADFGLARPYTK  152 (287)
T ss_pred             ccc-ccHHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEEcCCCCEEEccccceeeccC
Confidence            998 5999888554    246899999999999999999999   89999999999999999999999999999988765


Q ss_pred             CCccccceeecCCceeeeecC
Q 026214          218 GGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .......  ....+..|.+||
T Consensus       153 ~~~~~~~--~~~~~~~y~~PE  171 (287)
T cd07840         153 RNSADYT--NRVITLWYRPPE  171 (287)
T ss_pred             CCccccc--ccccccccCCce
Confidence            5321111  112234567777

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.93  E-value=3.2e-25  Score=184.49  Aligned_cols=157  Identities=17%  Similarity=0.165  Sum_probs=126.6

Q ss_pred             eeecccceEEEEEEE--CCeEEEEEEeeccCCc---chhhHHHHHHHHHh---cCCCceeeEeeEEecCCcceEEEeeCC
Q 026214           69 VITEDWGCILYKGFW--QERLISVMRFRESNRD---GHGSCINNIVYAAQ---MSHDHILKLIGCCLETPIPILAFESVE  140 (241)
Q Consensus        69 ~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~---l~h~niv~l~~~~~~~~~~~lv~e~~~  140 (241)
                      .||+|+||.||++.+  ++..+|+|.+......   ....+.+|..++..   .+||||+.+.+++...+..++||||++
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN   80 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence            489999999999998  6889999988754321   12334455444433   479999999999999999999999999


Q ss_pred             CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCc
Q 026214          141 YGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGT  220 (241)
Q Consensus       141 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~  220 (241)
                      +++|.+++...     ..+++..+..++.|++.||.|||   +.+++|+||||+|||++.++.++++|||++........
T Consensus        81 ~~~L~~~i~~~-----~~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~  152 (279)
T cd05633          81 GGDLHYHLSQH-----GVFSEKEMRFYATEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP  152 (279)
T ss_pred             CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccCc
Confidence            99999988654     35899999999999999999999   99999999999999999999999999999976643322


Q ss_pred             cccceeecCCceeeeecC
Q 026214          221 SGAKCLKSERTEICCVRE  238 (241)
Q Consensus       221 ~~~~~~~~~~~~~~~~~e  238 (241)
                      .     ...++..|++||
T Consensus       153 ~-----~~~~~~~y~aPE  165 (279)
T cd05633         153 H-----ASVGTHGYMAPE  165 (279)
T ss_pred             c-----CcCCCcCccCHH
Confidence            1     123455677777

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.93  E-value=3.4e-25  Score=184.60  Aligned_cols=152  Identities=19%  Similarity=0.285  Sum_probs=136.1

Q ss_pred             HHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           59 LATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        59 ~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      ..++.|.....||+|++|.||++.+  ++..+++|.+..... ....+.+|+.++..++|+|++++++++...+..++++
T Consensus        16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   94 (286)
T cd06614          16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVM   94 (286)
T ss_pred             CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEE
Confidence            3456677788999999999999999  688999999876543 4567889999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||+++++|.+++...    ...+++..+..++.|++.||.|||   ..+++|+||+|+||+++.++.++|+|||++....
T Consensus        95 e~~~~~~L~~~l~~~----~~~l~~~~~~~i~~~i~~~L~~lH---~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~  167 (286)
T cd06614          95 EYMDGGSLTDIITQN----FVRMNEPQIAYVCREVLQGLEYLH---SQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLT  167 (286)
T ss_pred             eccCCCcHHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCChhhEEEcCCCCEEECccchhhhhc
Confidence            999999999999765    136899999999999999999999   9999999999999999999999999999987665


Q ss_pred             CC
Q 026214          217 EG  218 (241)
Q Consensus       217 ~~  218 (241)
                      ..
T Consensus       168 ~~  169 (286)
T cd06614         168 KE  169 (286)
T ss_pred             cc
Confidence            43

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.93  E-value=7.5e-27  Score=183.69  Aligned_cols=156  Identities=17%  Similarity=0.215  Sum_probs=137.9

Q ss_pred             HHHHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCC----
Q 026214           57 LKLATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETP----  130 (241)
Q Consensus        57 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----  130 (241)
                      +....+.|.+.+.||+|+|+.||.+..  ++..+|+|++......+.+..++|++..++++|||+++++++...+.    
T Consensus        16 v~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~   95 (302)
T KOG2345|consen   16 VIINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGK   95 (302)
T ss_pred             EEEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCc
Confidence            344557789999999999999999997  89999999998777677888999999999999999999998886544    


Q ss_pred             -cceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCC--eEEccCCCCCeeEcCCCcEEEc
Q 026214          131 -IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRP--IVYRDFKTAHILFNEENVAKMF  207 (241)
Q Consensus       131 -~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~--ivH~dlk~~Nill~~~~~~ki~  207 (241)
                       ..|++++|...|||.+.+..... ....+++..++.|+.++++||.+||   +..  +.||||||.|||+++++.+++.
T Consensus        96 ~~~yll~Pyy~~Gsl~d~i~~~k~-kg~~~sE~~iL~if~gic~gL~~lH---~~~~~yAH~DiKP~NILls~~~~~vl~  171 (302)
T KOG2345|consen   96 HEAYLLLPYYKRGSLLDEIERLKI-KGNFVSEAQILWIFLGICRGLEALH---EKEPPYAHRDIKPANILLSDSGLPVLM  171 (302)
T ss_pred             eeEEEEeehhccccHHHHHHHHhh-cCCccCHHHHHHHHHHHHHHHHHHh---ccCCcccccCCCcceeEecCCCceEEE
Confidence             48999999999999999977532 3447999999999999999999999   555  9999999999999999999999


Q ss_pred             cccCceecC
Q 026214          208 DFSLSISIP  216 (241)
Q Consensus       208 DfG~a~~~~  216 (241)
                      |||.+...+
T Consensus       172 D~GS~~~a~  180 (302)
T KOG2345|consen  172 DLGSATQAP  180 (302)
T ss_pred             eccCccccc
Confidence            999998664

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.93  E-value=3.1e-25  Score=182.37  Aligned_cols=157  Identities=16%  Similarity=0.144  Sum_probs=133.3

Q ss_pred             eecccceEEEEEEE--CCeEEEEEEeeccCC---cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCCCCCH
Q 026214           70 ITEDWGCILYKGFW--QERLISVMRFRESNR---DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNL  144 (241)
Q Consensus        70 lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL  144 (241)
                      ||.|++|.||++.+  ++..+++|.+.....   ...+.+.+|+.+++.++||||+++++++.+++..++++||+++++|
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL   80 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence            68999999999999  589999999875432   2346789999999999999999999999999999999999999999


Q ss_pred             HHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCccccc
Q 026214          145 RDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAK  224 (241)
Q Consensus       145 ~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~~~~  224 (241)
                      .+++...     ..+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++.........   
T Consensus        81 ~~~l~~~-----~~l~~~~~~~~~~~i~~~l~~lH---~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~---  149 (262)
T cd05572          81 WTILRDR-----GLFDEYTARFYIACVVLAFEYLH---NRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKT---  149 (262)
T ss_pred             HHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccccc---
Confidence            9999554     34888999999999999999999   999999999999999999999999999999877654311   


Q ss_pred             eeecCCceeeeecC
Q 026214          225 CLKSERTEICCVRE  238 (241)
Q Consensus       225 ~~~~~~~~~~~~~e  238 (241)
                       .....+..|++||
T Consensus       150 -~~~~~~~~~~~PE  162 (262)
T cd05572         150 -WTFCGTPEYVAPE  162 (262)
T ss_pred             -ccccCCcCccChh
Confidence             1122344567776

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.93  E-value=6e-25  Score=186.08  Aligned_cols=146  Identities=20%  Similarity=0.305  Sum_probs=128.3

Q ss_pred             CCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC---cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           64 YDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR---DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        64 ~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      |...+.||+|+||.||++.+  ++..||+|.+.....   .....+.+|+.+++.++|||++++++++..+...+++|||
T Consensus        27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  106 (317)
T cd06635          27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY  106 (317)
T ss_pred             hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence            66778999999999999998  788999999875432   2235688899999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCC
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE  217 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~  217 (241)
                      +. |+|.+.+...    ..++++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++.....
T Consensus       107 ~~-g~l~~~~~~~----~~~l~~~~~~~i~~~i~~~l~~lH---~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~  177 (317)
T cd06635         107 CL-GSASDLLEVH----KKPLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASIASP  177 (317)
T ss_pred             CC-CCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcccEEECCCCCEEEecCCCccccCC
Confidence            97 5888877554    345899999999999999999999   99999999999999999999999999999876544

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.93  E-value=3.4e-25  Score=184.15  Aligned_cols=165  Identities=19%  Similarity=0.236  Sum_probs=136.7

Q ss_pred             CCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeC
Q 026214           64 YDQKNVITEDWGCILYKGFW--QERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESV  139 (241)
Q Consensus        64 ~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  139 (241)
                      |...+.||.|++|.||+|.+  ++..|++|++....  ......+.+|+.+++.++|||++++++++.+.+..++++||+
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~   80 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL   80 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence            45678999999999999998  78999999987543  222356889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCC
Q 026214          140 EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGG  219 (241)
Q Consensus       140 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~  219 (241)
                      + ++|.+++...   ....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++..+....
T Consensus        81 ~-~~l~~~~~~~---~~~~~~~~~~~~~~~~i~~~L~~lH---~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~  153 (283)
T cd07835          81 D-LDLKKYMDSS---PLTGLDPPLIKSYLYQLLQGIAYCH---SHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPV  153 (283)
T ss_pred             C-cCHHHHHhhC---CCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCc
Confidence            6 6999998665   2245899999999999999999999   8999999999999999999999999999998765432


Q ss_pred             ccccceeecCCceeeeecC
Q 026214          220 TSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~e  238 (241)
                      .....   ...+..|.+||
T Consensus       154 ~~~~~---~~~~~~~~aPE  169 (283)
T cd07835         154 RTYTH---EVVTLWYRAPE  169 (283)
T ss_pred             cccCc---cccccCCCCCc
Confidence            22111   11234567777

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.93  E-value=3.9e-25  Score=181.35  Aligned_cols=173  Identities=16%  Similarity=0.176  Sum_probs=139.8

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEec--CCcceEEE
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLE--TPIPILAF  136 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~  136 (241)
                      +|...+.||.|++|.||++.+  ++..+++|.+....  ....+.+..|+.+++.++||||+++++++..  ....++++
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM   80 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence            367778999999999999998  77889999887543  2234568889999999999999999998764  34678999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCC--CCCeEEccCCCCCeeEcCCCcEEEccccCcee
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGF--PRPIVYRDFKTAHILFNEENVAKMFDFSLSIS  214 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~--~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~  214 (241)
                      ||+++++|.+++..... ...++++..++.++.|++.||.|||..+  ..+++|+||+|+||+++.++.++|+|||++..
T Consensus        81 e~~~~~~L~~~l~~~~~-~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~  159 (265)
T cd08217          81 EYCEGGDLAQLIQKCKK-ERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKI  159 (265)
T ss_pred             hhccCCCHHHHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEeccccccc
Confidence            99999999999976422 2456899999999999999999999443  56899999999999999999999999999998


Q ss_pred             cCCCCccccceeecCCceeeeecCC
Q 026214          215 IPEGGTSGAKCLKSERTEICCVREN  239 (241)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~e~  239 (241)
                      +........   ....+..|++||.
T Consensus       160 ~~~~~~~~~---~~~~~~~~~~pE~  181 (265)
T cd08217         160 LGHDSSFAK---TYVGTPYYMSPEQ  181 (265)
T ss_pred             ccCCccccc---ccccCCCccChhh
Confidence            765543111   1224456777774

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.93  E-value=2.6e-25  Score=182.02  Aligned_cols=167  Identities=19%  Similarity=0.218  Sum_probs=138.9

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      +|...+.||.|+||.||++.+  ++..+|+|.+....  ......+.+|+.+++.++|+||+++++.+..+...++++||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~   80 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY   80 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence            467788999999999999999  77889999986542  12345688999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCC-cEEEccccCceecCC
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEEN-VAKMFDFSLSISIPE  217 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~-~~ki~DfG~a~~~~~  217 (241)
                      +++++|.+++...   ....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++ .++|+|||.+.....
T Consensus        81 ~~~~~L~~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~  154 (257)
T cd08225          81 CDGGDLMKRINRQ---RGVLFSEDQILSWFVQISLGLKHIH---DRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLND  154 (257)
T ss_pred             CCCCcHHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEcCCCCeEEecccccchhccC
Confidence            9999999999764   2345789999999999999999999   99999999999999998875 579999999987754


Q ss_pred             CCccccceeecCCceeeeecC
Q 026214          218 GGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +.....   ...++..|.+||
T Consensus       155 ~~~~~~---~~~~~~~~~ape  172 (257)
T cd08225         155 SMELAY---TCVGTPYYLSPE  172 (257)
T ss_pred             Cccccc---ccCCCccccCHH
Confidence            432211   123445577777

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.93  E-value=7e-28  Score=191.36  Aligned_cols=167  Identities=17%  Similarity=0.144  Sum_probs=136.4

Q ss_pred             cCCeeecccceEEEEEEE--CCeEEEEEEeeccCC-cchhhHHHHHHHHHhc-CCCceeeEeeEEecCCcceEEEeeCCC
Q 026214           66 QKNVITEDWGCILYKGFW--QERLISVMRFRESNR-DGHGSCINNIVYAAQM-SHDHILKLIGCCLETPIPILAFESVEY  141 (241)
Q Consensus        66 ~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~  141 (241)
                      ....||.|+||+|++-.+  .|+..|||+++.... ...++++.|.+...+- +.||||+++|.+...+.+|+.||+|+ 
T Consensus        68 dlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd-  146 (361)
T KOG1006|consen   68 DLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD-  146 (361)
T ss_pred             HHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh-
Confidence            356899999999999998  899999999986543 4567899999887666 78999999999999999999999997 


Q ss_pred             CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCcc
Q 026214          142 GNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTS  221 (241)
Q Consensus       142 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~  221 (241)
                      -||+.+...-...+...+++..+..|....+.||.||-.  ...|||||+||+|||++..|.+|+||||++..+...-..
T Consensus       147 ~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~--~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAk  224 (361)
T KOG1006|consen  147 ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKE--ELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAK  224 (361)
T ss_pred             hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHH--HhhhhhccCChhheEEecCCCEeeecccchHhHHHHHHh
Confidence            688877654433345668999999999999999999985  679999999999999999999999999999876443211


Q ss_pred             ccceeecCCceeeeecCC
Q 026214          222 GAKCLKSERTEICCVREN  239 (241)
Q Consensus       222 ~~~~~~~~~~~~~~~~e~  239 (241)
                      +    ...++.-|+|||+
T Consensus       225 T----~daGCrpYmAPER  238 (361)
T KOG1006|consen  225 T----VDAGCRPYMAPER  238 (361)
T ss_pred             h----hccCCccccChhc
Confidence            1    2223344677775

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.93  E-value=2.5e-25  Score=186.42  Aligned_cols=160  Identities=18%  Similarity=0.227  Sum_probs=134.4

Q ss_pred             CCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCCCCCH
Q 026214           67 KNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNL  144 (241)
Q Consensus        67 ~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL  144 (241)
                      ..+||+|+||.||++..  ++..||+|.+..........+.+|+.+++.++|+|++++++++...+..+++|||+++++|
T Consensus        25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L  104 (292)
T cd06657          25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL  104 (292)
T ss_pred             HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcH
Confidence            35799999999999988  7899999988655444556789999999999999999999999999999999999999999


Q ss_pred             HHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCccccc
Q 026214          145 RDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAK  224 (241)
Q Consensus       145 ~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~~~~  224 (241)
                      .+++..      ..+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++..+..+....  
T Consensus       105 ~~~~~~------~~~~~~~~~~~~~ql~~~l~~lH---~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~--  173 (292)
T cd06657         105 TDIVTH------TRMNEEQIAAVCLAVLKALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR--  173 (292)
T ss_pred             HHHHhc------CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEcccccceecccccccc--
Confidence            998733      34788999999999999999999   9999999999999999999999999999988765432211  


Q ss_pred             eeecCCceeeeecC
Q 026214          225 CLKSERTEICCVRE  238 (241)
Q Consensus       225 ~~~~~~~~~~~~~e  238 (241)
                       .....+..|.+||
T Consensus       174 -~~~~~~~~y~~pE  186 (292)
T cd06657         174 -KSLVGTPYWMAPE  186 (292)
T ss_pred             -cccccCccccCHH
Confidence             1112334567776

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.93  E-value=9.2e-25  Score=178.17  Aligned_cols=168  Identities=21%  Similarity=0.206  Sum_probs=142.6

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC--cchhhHHHHHHHHHhcCCCceeeEeeEEecC--CcceEEE
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR--DGHGSCINNIVYAAQMSHDHILKLIGCCLET--PIPILAF  136 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~  136 (241)
                      +|...+.||+|++|.||+|.+  ++..|++|.+.....  ...+.+.+|+.++++++||||+++++.+...  ...++++
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~   80 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL   80 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence            366788999999999999998  689999999876542  3457789999999999999999999999988  8899999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||+++++|.+++...     ..+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||.+....
T Consensus        81 e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lh---~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~  152 (260)
T cd06606          81 EYVSGGSLSSLLKKF-----GKLPEPVIRKYTRQILEGLAYLH---SNGIVHRDIKGANILVDSDGVVKLADFGCAKRLG  152 (260)
T ss_pred             EecCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEcccccEEecc
Confidence            999999999999665     26899999999999999999999   8999999999999999999999999999999887


Q ss_pred             CCCccccceeecCCceeeeecCC
Q 026214          217 EGGTSGAKCLKSERTEICCVREN  239 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e~  239 (241)
                      ..... ...........|++||.
T Consensus       153 ~~~~~-~~~~~~~~~~~y~~pE~  174 (260)
T cd06606         153 DIETG-EGTGSVRGTPYWMAPEV  174 (260)
T ss_pred             ccccc-ccccCCCCCccccCHhh
Confidence            65432 11122334456777773

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.93  E-value=3.4e-25  Score=190.30  Aligned_cols=164  Identities=16%  Similarity=0.194  Sum_probs=135.1

Q ss_pred             HhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeecc--CCcchhhHHHHHHHHHhcCCCceeeEeeEEecCC-----
Q 026214           60 ATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRES--NRDGHGSCINNIVYAAQMSHDHILKLIGCCLETP-----  130 (241)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----  130 (241)
                      ..+.|...+.||+|+||.||+|.+  ++..||+|.+...  .......+.+|+.++..++||||+++++++....     
T Consensus        14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   93 (353)
T cd07850          14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF   93 (353)
T ss_pred             hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence            457799899999999999999998  8899999998643  2233456788999999999999999999886443     


Q ss_pred             -cceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccc
Q 026214          131 -IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDF  209 (241)
Q Consensus       131 -~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~Df  209 (241)
                       ..++||||+. ++|.+.+...       +++..+..++.|++.||.|||   ..+++|+||||+||+++.++.++|+||
T Consensus        94 ~~~~lv~e~~~-~~l~~~~~~~-------l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nil~~~~~~~kL~Df  162 (353)
T cd07850          94 QDVYLVMELMD-ANLCQVIQMD-------LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDF  162 (353)
T ss_pred             CcEEEEEeccC-CCHHHHHhhc-------CCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEccC
Confidence             4699999997 5898888332       888899999999999999999   999999999999999999999999999


Q ss_pred             cCceecCCCCccccceeecCCceeeeecC
Q 026214          210 SLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       210 G~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |+++.........    ....+..|++||
T Consensus       163 g~~~~~~~~~~~~----~~~~~~~y~aPE  187 (353)
T cd07850         163 GLARTAGTSFMMT----PYVVTRYYRAPE  187 (353)
T ss_pred             ccceeCCCCCCCC----CCcccccccCHH
Confidence            9998775443211    122344577777

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.93  E-value=2.1e-25  Score=190.25  Aligned_cols=169  Identities=15%  Similarity=0.204  Sum_probs=137.3

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEec----CCcc
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLE----TPIP  132 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~  132 (241)
                      ..+|...+.||.|++|.||+|..  ++..||+|++....  ......+.+|+.++..++||||+++.+++..    ....
T Consensus         4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   83 (334)
T cd07855           4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV   83 (334)
T ss_pred             hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence            36788889999999999999998  78999999987542  2334667889999999999999999988753    3468


Q ss_pred             eEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCc
Q 026214          133 ILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS  212 (241)
Q Consensus       133 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a  212 (241)
                      ++++||+. ++|.+++...     ..+++..+..++.|++.||.|||   ..+++|+||||+||+++.++.+||+|||++
T Consensus        84 ~lv~e~~~-~~l~~~~~~~-----~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~  154 (334)
T cd07855          84 YVVMDLME-SDLHHIIHSD-----QPLTEEHIRYFLYQLLRGLKYIH---SANVIHRDLKPSNLLVNEDCELRIGDFGMA  154 (334)
T ss_pred             EEEEehhh-hhHHHHhccC-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEecccccc
Confidence            99999996 6999988443     44899999999999999999999   999999999999999999999999999999


Q ss_pred             eecCCCCcccc-ceeecCCceeeeecC
Q 026214          213 ISIPEGGTSGA-KCLKSERTEICCVRE  238 (241)
Q Consensus       213 ~~~~~~~~~~~-~~~~~~~~~~~~~~e  238 (241)
                      ..+........ .......+..|.+||
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~y~~PE  181 (334)
T cd07855         155 RGLSSSPTEHKYFMTEYVATRWYRAPE  181 (334)
T ss_pred             eeecccCcCCCcccccccccccccChH
Confidence            87754332211 111223445677777

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.93  E-value=1.9e-25  Score=183.14  Aligned_cols=141  Identities=18%  Similarity=0.165  Sum_probs=126.4

Q ss_pred             eecccceEEEEEEE--CCeEEEEEEeeccCC---cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCCCCCH
Q 026214           70 ITEDWGCILYKGFW--QERLISVMRFRESNR---DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNL  144 (241)
Q Consensus        70 lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL  144 (241)
                      ||.|+||.||++.+  ++..+++|.+.....   .....+.+|+.++.+++||||+++++.+......++++||+++++|
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL   80 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence            58899999999999  589999999875432   3456788999999999999999999999999999999999999999


Q ss_pred             HHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          145 RDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       145 ~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      .+++...     ..+++..+..++.|++.||.|||   ..+++|+||+|+||+++.++.++|+|||++.....+
T Consensus        81 ~~~l~~~-----~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~  146 (265)
T cd05579          81 ASLLENV-----GSLDEDVARIYIAEIVLALEYLH---SNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVR  146 (265)
T ss_pred             HHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HcCeecCCCCHHHeEEcCCCCEEEEecccchhcccC
Confidence            9999664     25899999999999999999999   999999999999999999999999999998866443

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>PTZ00284 protein kinase; Provisional

Probab=99.93  E-value=3.7e-25  Score=196.91  Aligned_cols=168  Identities=14%  Similarity=0.163  Sum_probs=130.6

Q ss_pred             HHHHHHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCC------CceeeEeeEE
Q 026214           55 QELKLATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSH------DHILKLIGCC  126 (241)
Q Consensus        55 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h------~niv~l~~~~  126 (241)
                      +++...+++|...++||+|+||.||+|.+  ++..||||++.... .....+..|+.++..++|      ++++.+++++
T Consensus       122 ~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~  200 (467)
T PTZ00284        122 EDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYF  200 (467)
T ss_pred             CccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEE
Confidence            34445567899999999999999999998  78899999986532 223445667777777754      4588898888


Q ss_pred             ecC-CcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCC-CCeEEccCCCCCeeEcCCC--
Q 026214          127 LET-PIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFP-RPIVYRDFKTAHILFNEEN--  202 (241)
Q Consensus       127 ~~~-~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~-~~ivH~dlk~~Nill~~~~--  202 (241)
                      ... ...++|||++ +++|.+++...     ..+++..+..++.|++.||.|||   . .+|+||||||+|||++.++  
T Consensus       201 ~~~~~~~~iv~~~~-g~~l~~~l~~~-----~~l~~~~~~~i~~qi~~aL~yLH---~~~gIiHrDlKP~NILl~~~~~~  271 (467)
T PTZ00284        201 QNETGHMCIVMPKY-GPCLLDWIMKH-----GPFSHRHLAQIIFQTGVALDYFH---TELHLMHTDLKPENILMETSDTV  271 (467)
T ss_pred             EcCCceEEEEEecc-CCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---hcCCeecCCCCHHHEEEecCCcc
Confidence            754 4688999988 57999988554     45899999999999999999999   7 5999999999999998665  


Q ss_pred             --------------cEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          203 --------------VAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       203 --------------~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                                    .+||+|||++.......+      ...++..|+|||
T Consensus       272 ~~~~~~~~~~~~~~~vkl~DfG~~~~~~~~~~------~~~gt~~Y~APE  315 (467)
T PTZ00284        272 VDPVTNRALPPDPCRVRICDLGGCCDERHSRT------AIVSTRHYRSPE  315 (467)
T ss_pred             cccccccccCCCCceEEECCCCccccCccccc------cccCCccccCcH
Confidence                          499999998864332211      122455788888

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.93  E-value=8.2e-25  Score=181.92  Aligned_cols=157  Identities=17%  Similarity=0.160  Sum_probs=125.7

Q ss_pred             eeecccceEEEEEEE--CCeEEEEEEeeccCCc---chhhHHHHHH---HHHhcCCCceeeEeeEEecCCcceEEEeeCC
Q 026214           69 VITEDWGCILYKGFW--QERLISVMRFRESNRD---GHGSCINNIV---YAAQMSHDHILKLIGCCLETPIPILAFESVE  140 (241)
Q Consensus        69 ~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~---~~~~~~~E~~---~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~  140 (241)
                      .||+|+||.||++.+  +++.||+|.+......   ....+..|..   .++...||+|+++.+++...+..++||||++
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN   80 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence            479999999999988  6889999998764311   1122344433   3444589999999999999999999999999


Q ss_pred             CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCc
Q 026214          141 YGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGT  220 (241)
Q Consensus       141 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~  220 (241)
                      +++|.+++...     ..+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++..+.....
T Consensus        81 g~~L~~~l~~~-----~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~  152 (278)
T cd05606          81 GGDLHYHLSQH-----GVFSEAEMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP  152 (278)
T ss_pred             CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccCC
Confidence            99999988543     45899999999999999999999   89999999999999999999999999999986643321


Q ss_pred             cccceeecCCceeeeecC
Q 026214          221 SGAKCLKSERTEICCVRE  238 (241)
Q Consensus       221 ~~~~~~~~~~~~~~~~~e  238 (241)
                      .     ...++..|++||
T Consensus       153 ~-----~~~~~~~y~aPE  165 (278)
T cd05606         153 H-----ASVGTHGYMAPE  165 (278)
T ss_pred             c-----CcCCCcCCcCcH
Confidence            1     123445667776

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.93  E-value=4.9e-25  Score=188.86  Aligned_cols=172  Identities=16%  Similarity=0.158  Sum_probs=139.8

Q ss_pred             ccCHHHHHHHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEE
Q 026214           51 IFSAQELKLATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCC  126 (241)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~  126 (241)
                      .....++...+++|...+.||+|+||.||++.+  ++..||+|++....  ......+.+|+.++..++||||+++.+++
T Consensus         6 ~~~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~   85 (345)
T cd07877           6 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVF   85 (345)
T ss_pred             hhHHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeee
Confidence            344566777889999999999999999999987  78999999987532  12345678899999999999999999988


Q ss_pred             ecC------CcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcC
Q 026214          127 LET------PIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNE  200 (241)
Q Consensus       127 ~~~------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~  200 (241)
                      ...      ...+++++++ +++|.+++..      ..+++..+..++.|++.||.|||   +.+++|+||+|+||+++.
T Consensus        86 ~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~  155 (345)
T cd07877          86 TPARSLEEFNDVYLVTHLM-GADLNNIVKC------QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNE  155 (345)
T ss_pred             eecccccccccEEEEehhc-ccCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHEEEcC
Confidence            543      3467888877 6799888733      34889999999999999999999   999999999999999999


Q ss_pred             CCcEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          201 ENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       201 ~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ++.++|+|||++........      ....+..|++||
T Consensus       156 ~~~~kl~dfg~~~~~~~~~~------~~~~~~~y~aPE  187 (345)
T cd07877         156 DCELKILDFGLARHTDDEMT------GYVATRWYRAPE  187 (345)
T ss_pred             CCCEEEeccccccccccccc------ccccCCCccCHH
Confidence            99999999999986543321      112344567777

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=1.1e-25  Score=198.47  Aligned_cols=144  Identities=22%  Similarity=0.214  Sum_probs=129.7

Q ss_pred             CeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCCCCCHH
Q 026214           68 NVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLR  145 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~  145 (241)
                      -+||+|.||+||-|.+  +...+|||-++.......+.+..|+.+.++|+|.|||+++|.+.+++++-+.||-++||||.
T Consensus       581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS  660 (1226)
T KOG4279|consen  581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS  660 (1226)
T ss_pred             EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence            4789999999999999  77889999998877667788999999999999999999999999999999999999999999


Q ss_pred             HHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcC-CCcEEEccccCceecC
Q 026214          146 DRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNE-ENVAKMFDFSLSISIP  216 (241)
Q Consensus       146 ~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~-~~~~ki~DfG~a~~~~  216 (241)
                      +++...  ..+-.-++.++-.+..||+.||.|||   .+.|||||||-+||||+. .|.+||+|||-++++.
T Consensus       661 sLLrsk--WGPlKDNEstm~fYtkQILeGLkYLH---en~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLA  727 (1226)
T KOG4279|consen  661 SLLRSK--WGPLKDNESTMNFYTKQILEGLKYLH---ENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLA  727 (1226)
T ss_pred             HHHHhc--cCCCccchhHHHHHHHHHHHHhhhhh---hcceeeccccCCcEEEeeccceEEecccccchhhc
Confidence            999775  22333388899999999999999999   999999999999999964 7999999999998773

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.93  E-value=7.8e-25  Score=181.67  Aligned_cols=162  Identities=21%  Similarity=0.208  Sum_probs=132.3

Q ss_pred             CCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC-CcchhhHHHHHHHHHhcC-CCceeeEeeEEecC--CcceEEEe
Q 026214           64 YDQKNVITEDWGCILYKGFW--QERLISVMRFRESN-RDGHGSCINNIVYAAQMS-HDHILKLIGCCLET--PIPILAFE  137 (241)
Q Consensus        64 ~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~--~~~~lv~e  137 (241)
                      |...+.||+|+||.||+|.+  ++..||+|.+.... ........+|+..+.++. |||++++++++.+.  +..++++|
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e   80 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE   80 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence            45567899999999999998  78899999987542 122234567888999884 99999999999887  88999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCC
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE  217 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~  217 (241)
                      |+. ++|.+.+...    ...+++..+..++.|++.||.|||   +.+++|+||+|+||+++. +.++|+|||++..+..
T Consensus        81 ~~~-~~l~~~l~~~----~~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~  151 (282)
T cd07831          81 LMD-MNLYELIKGR----KRPLPEKRVKSYMYQLLKSLDHMH---RNGIFHRDIKPENILIKD-DILKLADFGSCRGIYS  151 (282)
T ss_pred             cCC-ccHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEcC-CCeEEEeccccccccc
Confidence            997 5888888654    346899999999999999999999   999999999999999999 9999999999987754


Q ss_pred             CCccccceeecCCceeeeecC
Q 026214          218 GGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ......    ...+..|++||
T Consensus       152 ~~~~~~----~~~~~~y~aPE  168 (282)
T cd07831         152 KPPYTE----YISTRWYRAPE  168 (282)
T ss_pred             CCCcCC----CCCCcccCChh
Confidence            332211    12345677777

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.93  E-value=3.7e-25  Score=188.83  Aligned_cols=168  Identities=21%  Similarity=0.297  Sum_probs=135.9

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeecc--CCcchhhHHHHHHHHHhc-CCCceeeEeeEEecC--Ccce
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRES--NRDGHGSCINNIVYAAQM-SHDHILKLIGCCLET--PIPI  133 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~--~~~~  133 (241)
                      .++|...+.||.|+||.||+|.+  ++..+|+|++...  .......+.+|+.++..+ +||||+++++++...  ...+
T Consensus         6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~   85 (337)
T cd07852           6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIY   85 (337)
T ss_pred             hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEE
Confidence            45678889999999999999998  6889999988642  223345678899999999 999999999988653  3689


Q ss_pred             EEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCce
Q 026214          134 LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSI  213 (241)
Q Consensus       134 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~  213 (241)
                      +||||++ ++|.+++..      ..+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++.
T Consensus        86 lv~e~~~-~~L~~~~~~------~~~~~~~~~~i~~qi~~~L~~LH---~~~i~H~dl~p~nill~~~~~~kl~d~g~~~  155 (337)
T cd07852          86 LVFEYME-TDLHAVIRA------NILEDVHKRYIMYQLLKALKYIH---SGNVIHRDLKPSNILLNSDCRVKLADFGLAR  155 (337)
T ss_pred             EEecccc-cCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccchh
Confidence            9999997 599988843      25788899999999999999999   9999999999999999999999999999998


Q ss_pred             ecCCCCccc--cceeecCCceeeeecC
Q 026214          214 SIPEGGTSG--AKCLKSERTEICCVRE  238 (241)
Q Consensus       214 ~~~~~~~~~--~~~~~~~~~~~~~~~e  238 (241)
                      .+.......  .......++..|++||
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~y~aPE  182 (337)
T cd07852         156 SLSELEENPENPVLTDYVATRWYRAPE  182 (337)
T ss_pred             ccccccccccCcchhcccccccccCce
Confidence            775543221  1111223455678887

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.93  E-value=3.7e-25  Score=182.49  Aligned_cols=167  Identities=22%  Similarity=0.260  Sum_probs=132.5

Q ss_pred             CeeecccceEEEEEEEC--C------eEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           68 NVITEDWGCILYKGFWQ--E------RLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~~--~------~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      +.||.|+||.||+|...  .      ..+++|.+.... ......+.+|+.+++.++||||+++++++...+..+++|||
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL   80 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence            36899999999999872  2      578999876543 23456789999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCC--CCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCC-----cEEEccccC
Q 026214          139 VEYGNLRDRILSASQP--QTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEEN-----VAKMFDFSL  211 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~-----~~ki~DfG~  211 (241)
                      +++++|.+++......  ....+++..++.++.|++.||.|||   +.+++|+||+|+||+++.++     .++++|||+
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~  157 (269)
T cd05044          81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLE---QMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGL  157 (269)
T ss_pred             cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHH---hCCcccCCCChheEEEecCCCCCCcceEECCccc
Confidence            9999999999754211  2344788999999999999999999   99999999999999999877     899999999


Q ss_pred             ceecCCCCccccceeecCCceeeeecC
Q 026214          212 SISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       212 a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +..+........ ......+..|.+||
T Consensus       158 ~~~~~~~~~~~~-~~~~~~~~~y~aPE  183 (269)
T cd05044         158 ARDIYKSDYYRK-EGEGLLPVRWMAPE  183 (269)
T ss_pred             cccccccccccc-CcccCCCccccCHH
Confidence            986644322111 11112234567776

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.93  E-value=1e-24  Score=180.00  Aligned_cols=168  Identities=18%  Similarity=0.255  Sum_probs=134.2

Q ss_pred             CCCcCCeeecccceEEEEEEE---CCeEEEEEEeeccC----------CcchhhHHHHHHHHHh-cCCCceeeEeeEEec
Q 026214           63 NYDQKNVITEDWGCILYKGFW---QERLISVMRFRESN----------RDGHGSCINNIVYAAQ-MSHDHILKLIGCCLE  128 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~---~~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~  128 (241)
                      +|...+.||+|+||.||++.+   .+..+|+|.+....          ......+.+|+.++.+ ++||||+++++++..
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   80 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE   80 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence            367788999999999999998   35789999875321          1123457788888865 699999999999999


Q ss_pred             CCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCC-CCeEEccCCCCCeeEcCCCcEEEc
Q 026214          129 TPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFP-RPIVYRDFKTAHILFNEENVAKMF  207 (241)
Q Consensus       129 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~-~~ivH~dlk~~Nill~~~~~~ki~  207 (241)
                      .+..+++|||+++++|.+++..... ....+++..++.++.|++.||.|||   . .+++|+||+|+||+++.++.++|+
T Consensus        81 ~~~~~lv~e~~~~~~l~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh---~~~~i~H~dl~~~nil~~~~~~~~l~  156 (269)
T cd08528          81 NDRLYIVMDLIEGAPLGEHFNSLKE-KKQRFTEERIWNIFVQMVLALRYLH---KEKRIVHRDLTPNNIMLGEDDKVTIT  156 (269)
T ss_pred             CCeEEEEEecCCCCcHHHHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHhc---cCCceeecCCCHHHEEECCCCcEEEe
Confidence            9999999999999999998854211 2446889999999999999999999   5 679999999999999999999999


Q ss_pred             cccCceecCCCCccccceeecCCceeeeecC
Q 026214          208 DFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       208 DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |||++........    ......+..|.+||
T Consensus       157 dfg~~~~~~~~~~----~~~~~~~~~~~~Pe  183 (269)
T cd08528         157 DFGLAKQKQPESK----LTSVVGTILYSCPE  183 (269)
T ss_pred             cccceeecccccc----cccccCcccCcChh
Confidence            9999987655431    11222334566666

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.93  E-value=6.5e-26  Score=180.95  Aligned_cols=163  Identities=17%  Similarity=0.229  Sum_probs=133.6

Q ss_pred             cCCeeecccceEEEEEEE--CCeEEEEEEeecc-CCcchhhHHHHHHHHHhc-CCCceeeEeeEEecCCcceEEEeeCCC
Q 026214           66 QKNVITEDWGCILYKGFW--QERLISVMRFRES-NRDGHGSCINNIVYAAQM-SHDHILKLIGCCLETPIPILAFESVEY  141 (241)
Q Consensus        66 ~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~  141 (241)
                      ....||.|+.|.||++.+  ++..+|||.+... .....++.+..++++... +.|+||+.+|||..+...++.||.|. 
T Consensus        96 ~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs-  174 (391)
T KOG0983|consen   96 NLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMS-  174 (391)
T ss_pred             hHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHH-
Confidence            345789999999999999  7899999998764 344567888899988777 48999999999999999999999995 


Q ss_pred             CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCcc
Q 026214          142 GNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTS  221 (241)
Q Consensus       142 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~  221 (241)
                      .-++.++..-    .+++++..+-++...++.||.||-.  ..+|+|||+||+|||+|+.|++|+||||++.++......
T Consensus       175 ~C~ekLlkri----k~piPE~ilGk~tva~v~AL~YLKe--KH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAh  248 (391)
T KOG0983|consen  175 TCAEKLLKRI----KGPIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAH  248 (391)
T ss_pred             HHHHHHHHHh----cCCchHHhhhhhHHHHHHHHHHHHH--hcceeecccCccceEEccCCCEEeecccccceeeccccc
Confidence            3555555443    6679999999999999999999985  568999999999999999999999999999887654332


Q ss_pred             ccceeecCCceeeeecCC
Q 026214          222 GAKCLKSERTEICCVREN  239 (241)
Q Consensus       222 ~~~~~~~~~~~~~~~~e~  239 (241)
                      .    ...++..|+|||+
T Consensus       249 t----rsAGC~~YMaPER  262 (391)
T KOG0983|consen  249 T----RSAGCAAYMAPER  262 (391)
T ss_pred             c----cccCCccccCccc
Confidence            2    2234445666664

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.93  E-value=3.1e-25  Score=188.56  Aligned_cols=167  Identities=19%  Similarity=0.217  Sum_probs=138.8

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEecCC-----cce
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLETP-----IPI  133 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~  133 (241)
                      +|...+.||.|++|.||+|.+  ++..|++|.+....  ....+.+.+|+.+++.++||||+++.+++....     ..+
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY   80 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence            467788999999999999998  68999999987643  334567899999999999999999999988765     789


Q ss_pred             EEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCce
Q 026214          134 LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSI  213 (241)
Q Consensus       134 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~  213 (241)
                      ++|||++ ++|.+++...     ..+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.++|+|||++.
T Consensus        81 lv~e~~~-~~l~~~l~~~-----~~l~~~~~~~i~~~l~~~l~~LH---~~gi~H~dlkp~nili~~~~~~~L~dfg~~~  151 (330)
T cd07834          81 IVTELME-TDLHKVIKSP-----QPLTDDHIQYFLYQILRGLKYLH---SANVIHRDLKPSNILVNSNCDLKICDFGLAR  151 (330)
T ss_pred             EEecchh-hhHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccCceE
Confidence            9999998 5899888543     36899999999999999999999   9999999999999999999999999999999


Q ss_pred             ecCCCCccccceeecCCceeeeecC
Q 026214          214 SIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .................+..|.+||
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~y~aPE  176 (330)
T cd07834         152 GVDPDEDEKGFLTEYVVTRWYRAPE  176 (330)
T ss_pred             eecccccccccccccccccCcCCce
Confidence            8766542111112223345677777

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.93  E-value=4.8e-26  Score=210.47  Aligned_cols=147  Identities=19%  Similarity=0.258  Sum_probs=119.6

Q ss_pred             HhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEecCC------
Q 026214           60 ATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLETP------  130 (241)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------  130 (241)
                      -...|.....||+|+||.||++..  +|+.+|||++.... ........+|+.++++|+|||||+++..|.+..      
T Consensus       477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~  556 (1351)
T KOG1035|consen  477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVL  556 (1351)
T ss_pred             HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccc
Confidence            345677788999999999999999  99999999987643 234567899999999999999999987663210      


Q ss_pred             --------------------------------------------------------------------------------
Q 026214          131 --------------------------------------------------------------------------------  130 (241)
Q Consensus       131 --------------------------------------------------------------------------------  130 (241)
                                                                                                      
T Consensus       557 ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~  636 (1351)
T KOG1035|consen  557 EIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDS  636 (1351)
T ss_pred             cccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccccc
Confidence                                                                                            


Q ss_pred             ---------------------------------cceEEEeeCCCCCHHHHHhhcCCCCCCCC-CHHHHHHHHHHHHHHHH
Q 026214          131 ---------------------------------IPILAFESVEYGNLRDRILSASQPQTEPL-LMKHRLKIAMDIAHALA  176 (241)
Q Consensus       131 ---------------------------------~~~lv~e~~~~gsL~~~l~~~~~~~~~~l-~~~~~~~i~~~i~~~l~  176 (241)
                                                       .+|+-||||+..+|.+++..+.     .. .....++++.+|++||.
T Consensus       637 e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~-----~~~~~d~~wrLFreIlEGLa  711 (1351)
T KOG1035|consen  637 EGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNH-----FNSQRDEAWRLFREILEGLA  711 (1351)
T ss_pred             CCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcc-----cchhhHHHHHHHHHHHHHHH
Confidence                                             0156678887666666664431     11 35667889999999999


Q ss_pred             HHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCcee
Q 026214          177 YLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSIS  214 (241)
Q Consensus       177 ~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~  214 (241)
                      |+|   +.+||||||||.||++|++..+||+|||+|..
T Consensus       712 YIH---~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~  746 (1351)
T KOG1035|consen  712 YIH---DQGIIHRDLKPRNIFLDSRNSVKIGDFGLATD  746 (1351)
T ss_pred             HHH---hCceeeccCCcceeEEcCCCCeeecccccchh
Confidence            999   99999999999999999999999999999987

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.93  E-value=3.4e-25  Score=189.58  Aligned_cols=167  Identities=17%  Similarity=0.220  Sum_probs=135.7

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecC----------
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLET----------  129 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~----------  129 (241)
                      .+|...+.||.|+||.||+|.+  ++..||+|.+........+.+.+|+.+++.++||||+++++++...          
T Consensus         5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   84 (342)
T cd07854           5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS   84 (342)
T ss_pred             cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence            6788899999999999999998  7889999998776555567789999999999999999999776543          


Q ss_pred             ----CcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEc-CCCcE
Q 026214          130 ----PIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFN-EENVA  204 (241)
Q Consensus       130 ----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~-~~~~~  204 (241)
                          ...++++||++ ++|.+++..      ..+++..+..++.|++.||.|||   +.+++|+||||+||+++ .++.+
T Consensus        85 ~~~~~~~~lv~e~~~-~~L~~~~~~------~~l~~~~~~~~~~qi~~aL~~LH---~~givH~dikp~Nili~~~~~~~  154 (342)
T cd07854          85 LTELNSVYIVQEYME-TDLANVLEQ------GPLSEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANVFINTEDLVL  154 (342)
T ss_pred             ccccceEEEEeeccc-ccHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCceE
Confidence                34789999997 599888832      34889999999999999999999   99999999999999997 45679


Q ss_pred             EEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          205 KMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       205 ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +++|||++..+...............+..|.+||
T Consensus       155 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE  188 (342)
T cd07854         155 KIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPR  188 (342)
T ss_pred             EECCcccceecCCccccccccccccccccccCHH
Confidence            9999999987654322222222223345677777

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.93  E-value=6.7e-25  Score=197.43  Aligned_cols=177  Identities=18%  Similarity=0.192  Sum_probs=151.7

Q ss_pred             cCHHHHHHHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhc-CCCceeeEeeEEec
Q 026214           52 FSAQELKLATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQM-SHDHILKLIGCCLE  128 (241)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~  128 (241)
                      ..++.+...++-|.+.+.||.|.+|.||+++.  +++.+|+|++..+. ...++...|.++++.+ +|||++.++|++..
T Consensus         9 ~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~-d~deEiE~eynil~~~~~hpnv~~fyg~~~k   87 (953)
T KOG0587|consen    9 IDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE-DEEEEIELEYNMLKKYSHHPNVATFYGAFIK   87 (953)
T ss_pred             cchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc-cccHHHHHHHHHHHhccCCCCcceEEEEEEE
Confidence            34555566778889999999999999999998  88999999887654 3456678889999888 89999999999964


Q ss_pred             -----CCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCc
Q 026214          129 -----TPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENV  203 (241)
Q Consensus       129 -----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~  203 (241)
                           ++.+|||||||.+||..|++.+.   ....+.|..+..|++.++.|+.+||   .+.++|||+|-.|||++.++.
T Consensus        88 ~~~~~~DqLWLVMEfC~gGSVTDLVKn~---~g~rl~E~~IaYI~re~lrgl~HLH---~nkviHRDikG~NiLLT~e~~  161 (953)
T KOG0587|consen   88 KDPGNGDQLWLVMEFCGGGSVTDLVKNT---KGNRLKEEWIAYILREILRGLAHLH---NNKVIHRDIKGQNVLLTENAE  161 (953)
T ss_pred             ecCCCCCeEEEEeeccCCccHHHHHhhh---cccchhhHHHHHHHHHHHHHHHHHh---hcceeeecccCceEEEeccCc
Confidence                 46899999999999999999887   3667999999999999999999999   999999999999999999999


Q ss_pred             EEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          204 AKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       204 ~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +|+.|||++..++...-..   .+..++..|+|||
T Consensus       162 VKLvDFGvSaQldsT~grR---nT~iGtP~WMAPE  193 (953)
T KOG0587|consen  162 VKLVDFGVSAQLDSTVGRR---NTFIGTPYWMAPE  193 (953)
T ss_pred             EEEeeeeeeeeeecccccc---cCcCCCcccccce
Confidence            9999999999886553333   3555666778887

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.93  E-value=7.2e-25  Score=187.71  Aligned_cols=150  Identities=14%  Similarity=0.169  Sum_probs=128.6

Q ss_pred             HHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEecCC----
Q 026214           59 LATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLETP----  130 (241)
Q Consensus        59 ~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----  130 (241)
                      ...++|...+.||+|++|.||++.+  ++..||+|++....  ......+.+|+.++..++||||+++.+++..+.    
T Consensus        12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   91 (343)
T cd07880          12 EVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDR   91 (343)
T ss_pred             ccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccc
Confidence            3457788899999999999999998  78999999986432  122356889999999999999999999987654    


Q ss_pred             --cceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEcc
Q 026214          131 --IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFD  208 (241)
Q Consensus       131 --~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~D  208 (241)
                        ..++++||+ +++|.+++..      ..+++..+..++.|++.||.|||   ..+|+|+||+|+||+++.++.++++|
T Consensus        92 ~~~~~lv~e~~-~~~l~~~~~~------~~l~~~~~~~i~~qi~~al~~LH---~~gi~H~dlkp~Nill~~~~~~kl~d  161 (343)
T cd07880          92 FHDFYLVMPFM-GTDLGKLMKH------EKLSEDRIQFLVYQMLKGLKYIH---AAGIIHRDLKPGNLAVNEDCELKILD  161 (343)
T ss_pred             cceEEEEEecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEee
Confidence              358999999 5799888833      35899999999999999999999   99999999999999999999999999


Q ss_pred             ccCceecCCC
Q 026214          209 FSLSISIPEG  218 (241)
Q Consensus       209 fG~a~~~~~~  218 (241)
                      ||++......
T Consensus       162 fg~~~~~~~~  171 (343)
T cd07880         162 FGLARQTDSE  171 (343)
T ss_pred             cccccccccC
Confidence            9999876543

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.92  E-value=8.4e-25  Score=186.21  Aligned_cols=152  Identities=18%  Similarity=0.177  Sum_probs=130.4

Q ss_pred             HHHHHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEec-CC
Q 026214           56 ELKLATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLE-TP  130 (241)
Q Consensus        56 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~  130 (241)
                      ++...+++|...+.||.|+||.||++.+  ++..||+|++....  ....+.+.+|+.++..++||||+++.+++.. ..
T Consensus         4 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~   83 (328)
T cd07856           4 TVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLE   83 (328)
T ss_pred             ceeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCC
Confidence            3345678899999999999999999998  88999999886432  2234678899999999999999999999865 45


Q ss_pred             cceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEcccc
Q 026214          131 IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFS  210 (241)
Q Consensus       131 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG  210 (241)
                      ..++++||+. ++|.+++..      ..+++..+..++.|++.||.|||   ..+++|+||+|+||+++.++.++|+|||
T Consensus        84 ~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~~~~ql~~aL~~LH---~~~iiH~dl~p~Nili~~~~~~~l~dfg  153 (328)
T cd07856          84 DIYFVTELLG-TDLHRLLTS------RPLEKQFIQYFLYQILRGLKYVH---SAGVVHRDLKPSNILINENCDLKICDFG  153 (328)
T ss_pred             cEEEEeehhc-cCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEeECCCCCEEeCccc
Confidence            7899999985 699888843      34788888899999999999999   9999999999999999999999999999


Q ss_pred             CceecCC
Q 026214          211 LSISIPE  217 (241)
Q Consensus       211 ~a~~~~~  217 (241)
                      ++.....
T Consensus       154 ~~~~~~~  160 (328)
T cd07856         154 LARIQDP  160 (328)
T ss_pred             cccccCC
Confidence            9986543

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.92  E-value=6.8e-26  Score=202.63  Aligned_cols=152  Identities=20%  Similarity=0.339  Sum_probs=135.3

Q ss_pred             CcCCeeecccceEEEEEEE--CC----eEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEe
Q 026214           65 DQKNVITEDWGCILYKGFW--QE----RLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFE  137 (241)
Q Consensus        65 ~~~~~lg~G~~g~Vy~~~~--~~----~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  137 (241)
                      ...++||+|+||+||+|.+  .+    -+||+|.+.... .+...+++.|.-+|..++|||+++|+|+|..+. +.||++
T Consensus       699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq  777 (1177)
T KOG1025|consen  699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQ  777 (1177)
T ss_pred             hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHH
Confidence            4467999999999999999  33    468999887654 334678999999999999999999999998776 888999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCC
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE  217 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~  217 (241)
                      ||+.|+|.+++..+    +..+.....+.|+.||+.||.|||   ...+|||||-++|||+.....+||.|||+|+.+.+
T Consensus       778 ~mP~G~LlDyvr~h----r~~igsq~lLnw~~QIAkgM~YLe---~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~  850 (1177)
T KOG1025|consen  778 LMPLGCLLDYVREH----RDNIGSQDLLNWCYQIAKGMKYLE---EQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAP  850 (1177)
T ss_pred             hcccchHHHHHHHh----hccccHHHHHHHHHHHHHHHHHHH---hcchhhhhhhhhheeecCCCeEEEEecchhhccCc
Confidence            99999999999886    566889999999999999999999   99999999999999999999999999999999998


Q ss_pred             CCccccc
Q 026214          218 GGTSGAK  224 (241)
Q Consensus       218 ~~~~~~~  224 (241)
                      ++.+...
T Consensus       851 d~~ey~~  857 (1177)
T KOG1025|consen  851 DEKEYSA  857 (1177)
T ss_pred             ccccccc
Confidence            8765543

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.92  E-value=1.9e-25  Score=195.20  Aligned_cols=150  Identities=12%  Similarity=0.129  Sum_probs=132.1

Q ss_pred             HHHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC---cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcc
Q 026214           58 KLATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR---DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIP  132 (241)
Q Consensus        58 ~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  132 (241)
                      ......|...+.||-|+||.|.++.-  +...+|+|.+.+.+-   ........|-++|+..+++.||+|+..|.+.+.+
T Consensus       625 KMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnL  704 (1034)
T KOG0608|consen  625 KMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNL  704 (1034)
T ss_pred             hccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCce
Confidence            44456688889999999999999976  777899999887542   2234467789999999999999999999999999


Q ss_pred             eEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCc
Q 026214          133 ILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS  212 (241)
Q Consensus       133 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a  212 (241)
                      |+||+|++||++..+|...     +.+.+..+..++..+.+|+.+.|   ..|+|||||||+|||||.+|++||+||||+
T Consensus       705 YFVMdYIPGGDmMSLLIrm-----gIFeE~LARFYIAEltcAiesVH---kmGFIHRDiKPDNILIDrdGHIKLTDFGLC  776 (1034)
T KOG0608|consen  705 YFVMDYIPGGDMMSLLIRM-----GIFEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLC  776 (1034)
T ss_pred             EEEEeccCCccHHHHHHHh-----ccCHHHHHHHHHHHHHHHHHHHH---hccceecccCccceEEccCCceeeeecccc
Confidence            9999999999999999554     56888999999999999999999   999999999999999999999999999999


Q ss_pred             eec
Q 026214          213 ISI  215 (241)
Q Consensus       213 ~~~  215 (241)
                      .-+
T Consensus       777 TGf  779 (1034)
T KOG0608|consen  777 TGF  779 (1034)
T ss_pred             ccc
Confidence            754

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.92  E-value=6.8e-25  Score=185.13  Aligned_cols=144  Identities=19%  Similarity=0.233  Sum_probs=123.2

Q ss_pred             CeeecccceEEEEEEECCeEEEEEEeecc--CCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCCCCCHH
Q 026214           68 NVITEDWGCILYKGFWQERLISVMRFRES--NRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLR  145 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~  145 (241)
                      +.+|.|+++.||++..++..||+|++...  .......+.+|+.+++.++||||+++++++...+..+++|||+++++|.
T Consensus         8 ~~~~~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~   87 (314)
T cd08216           8 KCFEDLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCE   87 (314)
T ss_pred             HhhcCCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHH
Confidence            34455555555665558999999998764  2334567899999999999999999999999999999999999999999


Q ss_pred             HHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCC
Q 026214          146 DRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE  217 (241)
Q Consensus       146 ~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~  217 (241)
                      +++...   ....+++..+..++.|++.||.|||   +.+|+|+||+|+||+++.++.++|+|||.+..+..
T Consensus        88 ~~l~~~---~~~~~~~~~~~~~~~~l~~~L~~LH---~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~  153 (314)
T cd08216          88 DLLKTH---FPEGLPELAIAFILKDVLNALDYIH---SKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIK  153 (314)
T ss_pred             HHHHHh---cccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCcceEEEecCCceEEecCccceeecc
Confidence            999764   2345888999999999999999999   99999999999999999999999999999986643

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.92  E-value=8.2e-26  Score=202.37  Aligned_cols=168  Identities=23%  Similarity=0.254  Sum_probs=140.6

Q ss_pred             CCCcCCeeecccceE-EEEEEECCeEEEEEEeeccCCcchhhHHHHHHHHHhc-CCCceeeEeeEEecCCcceEEEeeCC
Q 026214           63 NYDQKNVITEDWGCI-LYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQM-SHDHILKLIGCCLETPIPILAFESVE  140 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~-Vy~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~  140 (241)
                      -|...+.+|.|+.|+ ||+|.+.++.||||++-...   ..-..+|+..|+.- +|||||++++.-.++.+.|+..|.|.
T Consensus       510 ~~~~~eilG~Gs~Gt~Vf~G~ye~R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~  586 (903)
T KOG1027|consen  510 FFSPKEILGYGSNGTVVFRGVYEGREVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA  586 (903)
T ss_pred             eeccHHHcccCCCCcEEEEEeeCCceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh
Confidence            456677889998866 69999999999999986543   34567899999988 79999999988888899999999997


Q ss_pred             CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcC-----CCcEEEccccCceec
Q 026214          141 YGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNE-----ENVAKMFDFSLSISI  215 (241)
Q Consensus       141 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~-----~~~~ki~DfG~a~~~  215 (241)
                       .||.+++..... ............++.|++.||++||   +.+||||||||.||||+.     ...++|+|||+++.+
T Consensus       587 -~sL~dlie~~~~-d~~~~~~i~~~~~l~q~~~GlaHLH---sl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl  661 (903)
T KOG1027|consen  587 -CSLQDLIESSGL-DVEMQSDIDPISVLSQIASGLAHLH---SLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKL  661 (903)
T ss_pred             -hhHHHHHhcccc-chhhcccccHHHHHHHHHHHHHHHH---hcccccccCCCceEEEEccCCCcceeEEeccccccccc
Confidence             699999976310 1111111345678999999999999   999999999999999976     257999999999999


Q ss_pred             CCCCccccceeecCCceeeeecC
Q 026214          216 PEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ..+.++......+.+++.|+|||
T Consensus       662 ~~~~sS~~r~s~~sGt~GW~APE  684 (903)
T KOG1027|consen  662 AGGKSSFSRLSGGSGTSGWQAPE  684 (903)
T ss_pred             CCCcchhhcccCCCCcccccCHH
Confidence            99988888889999999999998

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.92  E-value=5.3e-25  Score=187.99  Aligned_cols=166  Identities=17%  Similarity=0.232  Sum_probs=135.9

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeecc--CCcchhhHHHHHHHHHhcCCCceeeEeeEEecC-----Cc
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRES--NRDGHGSCINNIVYAAQMSHDHILKLIGCCLET-----PI  131 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~  131 (241)
                      .+.|...+.||.|+||.||++.+  ++..||+|.+...  .......+.+|+.++..++||||+++++++...     ..
T Consensus         4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~   83 (337)
T cd07858           4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND   83 (337)
T ss_pred             ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence            35688889999999999999998  7899999998753  222345678899999999999999999988654     34


Q ss_pred             ceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccC
Q 026214          132 PILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL  211 (241)
Q Consensus       132 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~  211 (241)
                      .++++||+. ++|.+++...     ..+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||+
T Consensus        84 ~~lv~e~~~-~~L~~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~  154 (337)
T cd07858          84 VYIVYELMD-TDLHQIIRSS-----QTLSDDHCQYFLYQLLRGLKYIH---SANVLHRDLKPSNLLLNANCDLKICDFGL  154 (337)
T ss_pred             EEEEEeCCC-CCHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECcCcc
Confidence            799999996 6899888543     45899999999999999999999   99999999999999999999999999999


Q ss_pred             ceecCCCCccccceeecCCceeeeecC
Q 026214          212 SISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       212 a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +..........   .....+..|.+||
T Consensus       155 ~~~~~~~~~~~---~~~~~~~~y~aPE  178 (337)
T cd07858         155 ARTTSEKGDFM---TEYVVTRWYRAPE  178 (337)
T ss_pred             ccccCCCcccc---cccccccCccChH
Confidence            98775442111   1222345677777

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.92  E-value=5.7e-25  Score=183.33  Aligned_cols=151  Identities=19%  Similarity=0.184  Sum_probs=125.0

Q ss_pred             CCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC-CcchhhHHHHHHHHHhcC-CCceeeEeeEEecCCcceEEEeeC
Q 026214           64 YDQKNVITEDWGCILYKGFW--QERLISVMRFRESN-RDGHGSCINNIVYAAQMS-HDHILKLIGCCLETPIPILAFESV  139 (241)
Q Consensus        64 ~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~  139 (241)
                      |...+.||+|+||.||++.+  ++..+|+|.+.... ......+.+|+.++.++. ||||+++++++..++..+++|||+
T Consensus         6 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~   85 (288)
T cd06616           6 LKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELM   85 (288)
T ss_pred             hHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEecc
Confidence            44567899999999999998  78999999987543 223456889999999995 999999999999999999999998


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCC-CCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          140 EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFP-RPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       140 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~-~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      . +++.++...........+++..+..++.|++.||.|||   + .+++||||||+||+++.++.++|+|||++..+..+
T Consensus        86 ~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh---~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~  161 (288)
T cd06616          86 D-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLK---EELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS  161 (288)
T ss_pred             c-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh---hcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccC
Confidence            7 57666543211112356899999999999999999999   6 49999999999999999999999999999866543

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.92  E-value=1.6e-24  Score=184.77  Aligned_cols=146  Identities=17%  Similarity=0.261  Sum_probs=126.7

Q ss_pred             cCCC-cCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcc--------------hhhHHHHHHHHHhcCCCceeeEee
Q 026214           62 NNYD-QKNVITEDWGCILYKGFW--QERLISVMRFRESNRDG--------------HGSCINNIVYAAQMSHDHILKLIG  124 (241)
Q Consensus        62 ~~~~-~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~--------------~~~~~~E~~~l~~l~h~niv~l~~  124 (241)
                      +.|. ..+.||.|+||.||+|.+  ++..||+|.+.......              ...+.+|+.++..++||||+++++
T Consensus         8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~   87 (335)
T PTZ00024          8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD   87 (335)
T ss_pred             cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence            3443 457799999999999998  78999999886543211              124778999999999999999999


Q ss_pred             EEecCCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcE
Q 026214          125 CCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVA  204 (241)
Q Consensus       125 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~  204 (241)
                      ++...+..+++|||+. ++|.+++...     ..+++.....++.|++.||.|||   +.+++|+||+|+||+++.++.+
T Consensus        88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~-----~~~~~~~~~~~~~ql~~aL~~LH---~~~i~H~dl~~~nill~~~~~~  158 (335)
T PTZ00024         88 VYVEGDFINLVMDIMA-SDLKKVVDRK-----IRLTESQVKCILLQILNGLNVLH---KWYFMHRDLSPANIFINSKGIC  158 (335)
T ss_pred             EEecCCcEEEEEeccc-cCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHeEECCCCCE
Confidence            9999999999999997 6999998543     44889999999999999999999   9999999999999999999999


Q ss_pred             EEccccCceecC
Q 026214          205 KMFDFSLSISIP  216 (241)
Q Consensus       205 ki~DfG~a~~~~  216 (241)
                      +|+|||++..+.
T Consensus       159 kl~dfg~~~~~~  170 (335)
T PTZ00024        159 KIADFGLARRYG  170 (335)
T ss_pred             EECCccceeecc
Confidence            999999998776

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.92  E-value=5.4e-25  Score=179.90  Aligned_cols=168  Identities=17%  Similarity=0.235  Sum_probs=140.3

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      +|...+.||.|++|.||++.+  ++..+++|.+....  ......+.+|+.+++.++||||+++.+++......++++||
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY   80 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence            367788999999999999988  78899999987543  22345678899999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      +++++|.+++..... ....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++++|||++......
T Consensus        81 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lh---~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~  156 (256)
T cd08530          81 APFGDLSKAISKRKK-KRKLIPEQEIWRIFIQLLRGLQALH---EQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN  156 (256)
T ss_pred             cCCCCHHHHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEEecCCcEEEeeccchhhhccC
Confidence            999999999866321 2356899999999999999999999   999999999999999999999999999999887655


Q ss_pred             CccccceeecCCceeeeecCC
Q 026214          219 GTSGAKCLKSERTEICCVREN  239 (241)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~e~  239 (241)
                      ...     .......|++||.
T Consensus       157 ~~~-----~~~~~~~~~~Pe~  172 (256)
T cd08530         157 MAK-----TQIGTPHYMAPEV  172 (256)
T ss_pred             Ccc-----cccCCccccCHHH
Confidence            111     1223445677764

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.92  E-value=2.9e-24  Score=181.66  Aligned_cols=145  Identities=21%  Similarity=0.312  Sum_probs=126.8

Q ss_pred             CCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCc---chhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           64 YDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRD---GHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        64 ~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      |...+.||+|+||.||+|.+  ++..|++|.+......   ....+.+|+.+++.++|||++++++++.+....+++|||
T Consensus        23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  102 (313)
T cd06633          23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY  102 (313)
T ss_pred             hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence            55567899999999999998  7889999998754322   235678899999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      +. ++|.+++...    ..++++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++....
T Consensus       103 ~~-~~l~~~l~~~----~~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~  172 (313)
T cd06633         103 CL-GSASDLLEVH----KKPLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASKSS  172 (313)
T ss_pred             CC-CCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChhhEEECCCCCEEEeecCCCcccC
Confidence            96 6888888654    346899999999999999999999   9999999999999999999999999999986543

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.92  E-value=9.2e-25  Score=193.99  Aligned_cols=175  Identities=15%  Similarity=0.193  Sum_probs=131.3

Q ss_pred             HhcCCCcCCeeecccceEEEEEEE------------------CCeEEEEEEeeccCCcchh--------------hHHHH
Q 026214           60 ATNNYDQKNVITEDWGCILYKGFW------------------QERLISVMRFRESNRDGHG--------------SCINN  107 (241)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~------------------~~~~vavK~~~~~~~~~~~--------------~~~~E  107 (241)
                      ..++|...++||+|+||.||+|.+                  .++.||||++.........              ....|
T Consensus       143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE  222 (507)
T PLN03224        143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE  222 (507)
T ss_pred             cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence            467899999999999999999964                  2357999998654322222              24457


Q ss_pred             HHHHHhcCCCce-----eeEeeEEec--------CCcceEEEeeCCCCCHHHHHhhcCCC-------------------C
Q 026214          108 IVYAAQMSHDHI-----LKLIGCCLE--------TPIPILAFESVEYGNLRDRILSASQP-------------------Q  155 (241)
Q Consensus       108 ~~~l~~l~h~ni-----v~l~~~~~~--------~~~~~lv~e~~~~gsL~~~l~~~~~~-------------------~  155 (241)
                      +.++.+++|.++     ++++++|..        .+..||||||+++++|.+++......                   .
T Consensus       223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~  302 (507)
T PLN03224        223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP  302 (507)
T ss_pred             HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence            777788866654     667777653        34689999999999999998753110                   1


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCccccceeecCCceeee
Q 026214          156 TEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICC  235 (241)
Q Consensus       156 ~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~  235 (241)
                      ...+++..+..++.|++.||.|||   ..+|+||||||+|||++.++.+||+|||++.....+....  ...+..+..|+
T Consensus       303 ~~~~~~~~~~~i~~ql~~aL~~lH---~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~--~~~g~~tp~Y~  377 (507)
T PLN03224        303 QDKRDINVIKGVMRQVLTGLRKLH---RIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFN--PLYGMLDPRYS  377 (507)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccC--ccccCCCccee
Confidence            123467788899999999999999   9999999999999999999999999999997665432211  22344456788


Q ss_pred             ecCC
Q 026214          236 VREN  239 (241)
Q Consensus       236 ~~e~  239 (241)
                      +||.
T Consensus       378 aPE~  381 (507)
T PLN03224        378 PPEE  381 (507)
T ss_pred             Chhh
Confidence            8883

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.92  E-value=1.2e-24  Score=186.16  Aligned_cols=160  Identities=15%  Similarity=0.188  Sum_probs=131.3

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEecCC------c
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLETP------I  131 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~  131 (241)
                      +.|.....||+|+||.||+|.+  ++..||+|.+....  ......+.+|+.++..++||||+++++++....      .
T Consensus        15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   94 (342)
T cd07879          15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQD   94 (342)
T ss_pred             cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCce
Confidence            7788899999999999999997  78999999986532  222356889999999999999999999987543      4


Q ss_pred             ceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccC
Q 026214          132 PILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL  211 (241)
Q Consensus       132 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~  211 (241)
                      .++++||+. .+|....       ...+++..+..++.|++.||.|||   ..+++||||+|+||+++.++.++|+|||+
T Consensus        95 ~~lv~e~~~-~~l~~~~-------~~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dlkp~NIll~~~~~~kL~dfg~  163 (342)
T cd07879          95 FYLVMPYMQ-TDLQKIM-------GHPLSEDKVQYLVYQMLCGLKYIH---SAGIIHRDLKPGNLAVNEDCELKILDFGL  163 (342)
T ss_pred             EEEEecccc-cCHHHHH-------cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCCC
Confidence            589999997 4787766       234889999999999999999999   99999999999999999999999999999


Q ss_pred             ceecCCCCccccceeecCCceeeeecC
Q 026214          212 SISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       212 a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ++........      ...+..|++||
T Consensus       164 ~~~~~~~~~~------~~~~~~y~aPE  184 (342)
T cd07879         164 ARHADAEMTG------YVVTRWYRAPE  184 (342)
T ss_pred             CcCCCCCCCC------ceeeecccChh
Confidence            9865433211      12234567777

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.92  E-value=8.8e-25  Score=183.80  Aligned_cols=150  Identities=19%  Similarity=0.274  Sum_probs=128.1

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCc--chhhHHHHHHHHHhcCCCceeeEeeEEecCC------
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRD--GHGSCINNIVYAAQMSHDHILKLIGCCLETP------  130 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------  130 (241)
                      .++|...++||.|++|.||+|.+  ++..+++|.+......  ....+.+|+.++..++||||+++++++....      
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   86 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK   86 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence            46788999999999999999998  7889999998654322  2345788999999999999999998875433      


Q ss_pred             --cceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEcc
Q 026214          131 --IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFD  208 (241)
Q Consensus       131 --~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~D  208 (241)
                        ..++++||+. ++|...+...    ...+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|
T Consensus        87 ~~~~~lv~~~~~-~~l~~~~~~~----~~~~~~~~~~~i~~~l~~al~~lH---~~~i~H~dl~p~nil~~~~~~~~l~d  158 (311)
T cd07866          87 RGSVYMVTPYMD-HDLSGLLENP----SVKLTESQIKCYMLQLLEGINYLH---ENHILHRDIKAANILIDNQGILKIAD  158 (311)
T ss_pred             CceEEEEEecCC-cCHHHHHhcc----ccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECc
Confidence              4699999997 5788777543    345899999999999999999999   99999999999999999999999999


Q ss_pred             ccCceecCCC
Q 026214          209 FSLSISIPEG  218 (241)
Q Consensus       209 fG~a~~~~~~  218 (241)
                      ||++......
T Consensus       159 fg~~~~~~~~  168 (311)
T cd07866         159 FGLARPYDGP  168 (311)
T ss_pred             CccchhccCC
Confidence            9999876543

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.92  E-value=4.1e-24  Score=176.76  Aligned_cols=163  Identities=17%  Similarity=0.136  Sum_probs=129.4

Q ss_pred             HHHHHhcCCCcCCee--ecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhc-CCCceeeEeeEEecCC
Q 026214           56 ELKLATNNYDQKNVI--TEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQM-SHDHILKLIGCCLETP  130 (241)
Q Consensus        56 ~~~~~~~~~~~~~~l--g~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~  130 (241)
                      +.....++|...+.+  |.|+||.||++..  ++..+|+|.+........     |+.....+ +||||+++++++...+
T Consensus         8 ~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~~~   82 (267)
T PHA03390          8 ELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTTLK   82 (267)
T ss_pred             HHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEecCC
Confidence            334444566665665  9999999999998  788899999875432111     22222223 7999999999999999


Q ss_pred             cceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCC-cEEEccc
Q 026214          131 IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEEN-VAKMFDF  209 (241)
Q Consensus       131 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~-~~ki~Df  209 (241)
                      ..++||||+++++|.+++...     ..+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++ .++|+||
T Consensus        83 ~~~iv~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~l~df  154 (267)
T PHA03390         83 GHVLIMDYIKDGDLFDLLKKE-----GKLSEAEVKKIIRQLVEALNDLH---KHNIIHNDIKLENVLYDRAKDRIYLCDY  154 (267)
T ss_pred             eeEEEEEcCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEeCCCCeEEEecC
Confidence            999999999999999999654     26899999999999999999999   99999999999999999988 9999999


Q ss_pred             cCceecCCCCccccceeecCCceeeeecC
Q 026214          210 SLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       210 G~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |++.........       ..+..|.+||
T Consensus       155 g~~~~~~~~~~~-------~~~~~y~aPE  176 (267)
T PHA03390        155 GLCKIIGTPSCY-------DGTLDYFSPE  176 (267)
T ss_pred             ccceecCCCccC-------CCCCcccChh
Confidence            999876543221       2334566776

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.92  E-value=5e-25  Score=182.39  Aligned_cols=149  Identities=19%  Similarity=0.186  Sum_probs=132.6

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhcC-CCceeeEeeEEecCCcceEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQMS-HDHILKLIGCCLETPIPILA  135 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv  135 (241)
                      ++|...+.||.|++|.||++..  ++..|++|.+....   ......+.+|..++.++. ||||+++++++...+..+++
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv   80 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV   80 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence            3577889999999999999998  78999999987532   122356788999999998 99999999999999999999


Q ss_pred             EeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceec
Q 026214          136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI  215 (241)
Q Consensus       136 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~  215 (241)
                      ||++.+++|.+++...     ..+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++++|||++...
T Consensus        81 ~e~~~~~~L~~~l~~~-----~~l~~~~~~~i~~ql~~~l~~Lh---~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~  152 (280)
T cd05581          81 LEYAPNGELLQYIRKY-----GSLDEKCTRFYAAEILLALEYLH---SKGIIHRDLKPENILLDKDMHIKITDFGTAKVL  152 (280)
T ss_pred             EcCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEecCCcccccc
Confidence            9999999999999654     36999999999999999999999   999999999999999999999999999999877


Q ss_pred             CCC
Q 026214          216 PEG  218 (241)
Q Consensus       216 ~~~  218 (241)
                      ...
T Consensus       153 ~~~  155 (280)
T cd05581         153 DPN  155 (280)
T ss_pred             CCc
Confidence            544

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=1.7e-24  Score=177.87  Aligned_cols=142  Identities=18%  Similarity=0.130  Sum_probs=120.2

Q ss_pred             CeeecccceEEEEEEE--CCeEEEEEEeeccCCc---chhhHHHHHHHH-HhcCCCceeeEeeEEecCCcceEEEeeCCC
Q 026214           68 NVITEDWGCILYKGFW--QERLISVMRFRESNRD---GHGSCINNIVYA-AQMSHDHILKLIGCCLETPIPILAFESVEY  141 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~---~~~~~~~E~~~l-~~l~h~niv~l~~~~~~~~~~~lv~e~~~~  141 (241)
                      +.||.|++|.||+|.+  ++..||+|.+......   ....+..|..++ ...+|||++++++++...+..++++||+++
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            4689999999999998  7889999998654311   122344554443 445899999999999999999999999999


Q ss_pred             CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCC
Q 026214          142 GNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE  217 (241)
Q Consensus       142 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~  217 (241)
                      ++|.+++...     ..+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++.....
T Consensus        82 ~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~  149 (260)
T cd05611          82 GDCASLIKTL-----GGLPEDWAKQYIAEVVLGVEDLH---QRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE  149 (260)
T ss_pred             CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEeecccceeccc
Confidence            9999999553     45889999999999999999999   89999999999999999999999999999886543

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.92  E-value=9.2e-26  Score=173.50  Aligned_cols=170  Identities=16%  Similarity=0.179  Sum_probs=137.2

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeecc-CCcchhhHHHHHHHHHhc-CCCceeeEeeEEecCCcceEEEe
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRES-NRDGHGSCINNIVYAAQM-SHDHILKLIGCCLETPIPILAFE  137 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e  137 (241)
                      +.......||.|++|.|-+..+  +|...|+|++.-. ..+..++.++|+++..+. .+|.+|.++|.+......|+.||
T Consensus        46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME  125 (282)
T KOG0984|consen   46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICME  125 (282)
T ss_pred             hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHH
Confidence            3444567899999999877777  9999999998754 334457789999987666 89999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCC
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE  217 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~  217 (241)
                      .|. .||+.+..+-.. ..+.+++..+-+|+..++.||.|||+  ...++|||+||+||||+..|.+||||||.+..+..
T Consensus       126 ~M~-tSldkfy~~v~~-~g~~ipE~vlGkIa~Svv~al~~L~~--kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~d  201 (282)
T KOG0984|consen  126 LMD-TSLDKFYRKVLK-KGGTIPEDVLGKIAVSVVHALEFLHS--KLSVIHRDVKPSNILINYDGQVKICDFGISGYLVD  201 (282)
T ss_pred             Hhh-hhHHHHHHHHHh-cCCcCchHHhhHhHHHHHHHHHHHHH--HhhhhhccCCcceEEEccCCcEEEcccccceeehh
Confidence            997 698887765422 45678999999999999999999996  67999999999999999999999999999987755


Q ss_pred             CCccccceeecCCceeeeecCC
Q 026214          218 GGTSGAKCLKSERTEICCVREN  239 (241)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~e~  239 (241)
                      .-..+    ...++.-|+|||.
T Consensus       202 SiAkt----~daGCkpYmaPEr  219 (282)
T KOG0984|consen  202 SIAKT----MDAGCKPYMAPER  219 (282)
T ss_pred             hhHHH----HhcCCCccCChhh
Confidence            42221    1234445666664

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.92  E-value=1.4e-24  Score=180.30  Aligned_cols=164  Identities=19%  Similarity=0.201  Sum_probs=135.2

Q ss_pred             CCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC-cchhhHHHHHHHHHhcC-CCceeeEeeEEecCCcceEEEeeC
Q 026214           64 YDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR-DGHGSCINNIVYAAQMS-HDHILKLIGCCLETPIPILAFESV  139 (241)
Q Consensus        64 ~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~  139 (241)
                      |...+.||.|++|.||+|..  ++..|++|++..... .......+|+..+.+++ |||++++++++..++..+++|||+
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~   80 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM   80 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence            45678899999999999998  678899999865432 12234567999999998 999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCC
Q 026214          140 EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGG  219 (241)
Q Consensus       140 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~  219 (241)
                       +++|.+.+...   ....+++..+..++.|++.+|.|||   +.+++|+||+|+||+++.++.++|+|||++.......
T Consensus        81 -~~~l~~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~  153 (283)
T cd07830          81 -EGNLYQLMKDR---KGKPFSESVIRSIIYQILQGLAHIH---KHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP  153 (283)
T ss_pred             -CCCHHHHHHhc---ccccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCCEEEeecccceeccCCC
Confidence             68999998765   2346899999999999999999999   9999999999999999999999999999998775433


Q ss_pred             ccccceeecCCceeeeecC
Q 026214          220 TSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~e  238 (241)
                      ....    ...+..|.+||
T Consensus       154 ~~~~----~~~~~~~~aPE  168 (283)
T cd07830         154 PYTD----YVSTRWYRAPE  168 (283)
T ss_pred             CcCC----CCCcccccCce
Confidence            2211    12334566676

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.92  E-value=1e-24  Score=181.88  Aligned_cols=167  Identities=17%  Similarity=0.124  Sum_probs=136.4

Q ss_pred             CCCcCCeeecccceEEEEEEE-----CCeEEEEEEeeccC----CcchhhHHHHHHHHHhc-CCCceeeEeeEEecCCcc
Q 026214           63 NYDQKNVITEDWGCILYKGFW-----QERLISVMRFRESN----RDGHGSCINNIVYAAQM-SHDHILKLIGCCLETPIP  132 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~  132 (241)
                      +|...+.||+|++|.||++..     ++..||+|.+....    ......+.+|+.++.++ +||||+++.+.+..+...
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~   80 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL   80 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence            366778999999999999985     56789999987532    12345678999999999 699999999999999999


Q ss_pred             eEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCc
Q 026214          133 ILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS  212 (241)
Q Consensus       133 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a  212 (241)
                      ++||||+++++|.+.+...     ..+++..+..++.|++.||.|||   ..+++|+||+|+||+++.++.++|+|||++
T Consensus        81 ~lv~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lH---~~~~~H~dl~p~nil~~~~~~~~l~dfg~~  152 (288)
T cd05583          81 HLILDYVNGGELFTHLYQR-----EHFTESEVRVYIAEIVLALDHLH---QLGIIYRDIKLENILLDSEGHVVLTDFGLS  152 (288)
T ss_pred             EEEEecCCCCcHHHHHhhc-----CCcCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEEECccc
Confidence            9999999999999998543     35889999999999999999999   999999999999999999999999999999


Q ss_pred             eecCCCCccccceeecCCceeeeecCC
Q 026214          213 ISIPEGGTSGAKCLKSERTEICCVREN  239 (241)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~e~  239 (241)
                      ..+..+.......  ......|++||.
T Consensus       153 ~~~~~~~~~~~~~--~~~~~~y~aPE~  177 (288)
T cd05583         153 KEFLAEEEERAYS--FCGTIEYMAPEV  177 (288)
T ss_pred             ccccccccccccc--ccCCccccCHHH
Confidence            8765443222211  123345667763

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.92  E-value=1.4e-24  Score=184.69  Aligned_cols=142  Identities=17%  Similarity=0.149  Sum_probs=123.4

Q ss_pred             Ceeecc--cceEEEEEEE--CCeEEEEEEeeccCC--cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCCC
Q 026214           68 NVITED--WGCILYKGFW--QERLISVMRFRESNR--DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEY  141 (241)
Q Consensus        68 ~~lg~G--~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~  141 (241)
                      ..||.|  +||+||.+.+  +++.||+|.+.....  ...+.+.+|+.+++.++||||+++++++...+..++++||+.+
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~   83 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY   83 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence            356666  8999999998  889999999875432  2346788899999999999999999999999999999999999


Q ss_pred             CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceec
Q 026214          142 GNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI  215 (241)
Q Consensus       142 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~  215 (241)
                      ++|.+++...   ....+++..+..++.|++.||.|||   +.+++||||||+||+++.++.++++||+.+...
T Consensus        84 ~~l~~~l~~~---~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~  151 (328)
T cd08226          84 GSANSLLKTY---FPEGMSEALIGNILFGALRGLNYLH---QNGYIHRNIKASHILISGDGLVSLSGLSHLYSL  151 (328)
T ss_pred             CCHHHHHHhh---cccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEeCCCcEEEechHHHhhh
Confidence            9999998764   2345889999999999999999999   999999999999999999999999999866544

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.92  E-value=1.9e-24  Score=179.34  Aligned_cols=164  Identities=21%  Similarity=0.230  Sum_probs=137.2

Q ss_pred             CCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCc--chhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeC
Q 026214           64 YDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRD--GHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESV  139 (241)
Q Consensus        64 ~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  139 (241)
                      |...+.||.|++|.||+|..  ++..+++|.+......  ....+.+|+.+++.++||||+++++++..++..++++||+
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   80 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM   80 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence            45567899999999999998  7889999998764322  3467889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCC
Q 026214          140 EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGG  219 (241)
Q Consensus       140 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~  219 (241)
                      + ++|.+.+...    ...+++..+..++.|++.||.|||   ..+++|+||+|+||+++.++.++|+|||.+.....+.
T Consensus        81 ~-~~l~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~  152 (283)
T cd05118          81 D-TDLYKLIKDR----QRGLPESLIKSYLYQLLQGLAFCH---SHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV  152 (283)
T ss_pred             C-CCHHHHHHhh----cccCCHHHHHHHHHHHHHHHHHHH---HCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc
Confidence            7 5998888664    246899999999999999999999   9999999999999999999999999999998886654


Q ss_pred             ccccceeecCCceeeeecC
Q 026214          220 TSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~e  238 (241)
                      ...   .....+..|.+||
T Consensus       153 ~~~---~~~~~~~~~~~PE  168 (283)
T cd05118         153 RPY---THYVVTRWYRAPE  168 (283)
T ss_pred             ccc---cCccCcccccCcH
Confidence            111   1122344567776

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.92  E-value=2.2e-24  Score=183.78  Aligned_cols=167  Identities=19%  Similarity=0.204  Sum_probs=133.2

Q ss_pred             CCCcCCeeecccceEEEEEEE--C--CeEEEEEEeeccC--CcchhhHHHHHHHHHhc-CCCceeeEeeEEecC----Cc
Q 026214           63 NYDQKNVITEDWGCILYKGFW--Q--ERLISVMRFRESN--RDGHGSCINNIVYAAQM-SHDHILKLIGCCLET----PI  131 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~--~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~----~~  131 (241)
                      +|...+.||+|+||.||++.+  +  +..||+|.+....  ....+.+.+|+.++.++ +||||+++++.+...    ..
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~   80 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE   80 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence            366778999999999999998  4  7789999987532  22346688999999999 699999999875432    45


Q ss_pred             ceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccC
Q 026214          132 PILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL  211 (241)
Q Consensus       132 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~  211 (241)
                      .+++++|+. ++|.+++...     ..+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.++|+|||+
T Consensus        81 ~~~~~e~~~-~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~givH~dlkp~Nili~~~~~~kl~Dfg~  151 (332)
T cd07857          81 LYLYEELME-ADLHQIIRSG-----QPLTDAHFQSFIYQILCGLKYIH---SANVLHRDLKPGNLLVNADCELKICDFGL  151 (332)
T ss_pred             EEEEEeccc-CCHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHeEEcCCCCEEeCcCCC
Confidence            788889886 6999988543     45899999999999999999999   99999999999999999999999999999


Q ss_pred             ceecCCCCccccc-eeecCCceeeeecC
Q 026214          212 SISIPEGGTSGAK-CLKSERTEICCVRE  238 (241)
Q Consensus       212 a~~~~~~~~~~~~-~~~~~~~~~~~~~e  238 (241)
                      +..+......... .....++..|++||
T Consensus       152 a~~~~~~~~~~~~~~~~~~g~~~y~aPE  179 (332)
T cd07857         152 ARGFSENPGENAGFMTEYVATRWYRAPE  179 (332)
T ss_pred             ceecccccccccccccCcccCccccCcH
Confidence            9877654322111 11223455688888

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.92  E-value=2.8e-24  Score=181.31  Aligned_cols=147  Identities=19%  Similarity=0.307  Sum_probs=127.9

Q ss_pred             CCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           64 YDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        64 ~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      |...+.||.|++|.||+|.+  ++..+++|.+....   ......+.+|+.+++.++|+|++++.+++......++|+||
T Consensus        17 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   96 (308)
T cd06634          17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY   96 (308)
T ss_pred             HHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEc
Confidence            55667899999999999998  77889999886432   12335678899999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      +. |+|.+.+...    ..++++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++....+.
T Consensus        97 ~~-~~l~~~~~~~----~~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~  168 (308)
T cd06634          97 CL-GSASDLLEVH----KKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA  168 (308)
T ss_pred             cC-CCHHHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHhEEECCCCcEEECCcccceeecCc
Confidence            97 6888887554    345889999999999999999999   999999999999999999999999999999876543

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.92  E-value=6e-27  Score=187.03  Aligned_cols=149  Identities=17%  Similarity=0.216  Sum_probs=129.2

Q ss_pred             CCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEecCC-----cceE
Q 026214           64 YDQKNVITEDWGCILYKGFW--QERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLETP-----IPIL  134 (241)
Q Consensus        64 ~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~l  134 (241)
                      ....+.||.|+||.||.+++  +++.||+|++...-  -...+.+.+|+.++.-++|.|++..+++.....     ..|.
T Consensus        55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV  134 (449)
T KOG0664|consen   55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV  134 (449)
T ss_pred             CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence            45678999999999999999  89999999987542  234578999999999999999999988876543     5788


Q ss_pred             EEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCcee
Q 026214          135 AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSIS  214 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~  214 (241)
                      ++|+|. .+|...+     -+++.++.+.+.-+++||++||.|||   +.+|+||||||.|.|++.++.+||||||+|+.
T Consensus       135 ~TELmQ-SDLHKII-----VSPQ~Ls~DHvKVFlYQILRGLKYLH---sA~ILHRDIKPGNLLVNSNCvLKICDFGLARv  205 (449)
T KOG0664|consen  135 LTELMQ-SDLHKII-----VSPQALTPDHVKVFVYQILRGLKYLH---TANILHRDIKPGNLLVNSNCILKICDFGLART  205 (449)
T ss_pred             HHHHHH-hhhhhee-----ccCCCCCcchhhhhHHHHHhhhHHHh---hcchhhccCCCccEEeccCceEEecccccccc
Confidence            899996 5888877     34677999999999999999999999   99999999999999999999999999999998


Q ss_pred             cCCCCcc
Q 026214          215 IPEGGTS  221 (241)
Q Consensus       215 ~~~~~~~  221 (241)
                      .+.+++.
T Consensus       206 ee~d~~~  212 (449)
T KOG0664|consen  206 WDQRDRL  212 (449)
T ss_pred             cchhhhh
Confidence            8777544

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.92  E-value=1.3e-24  Score=171.07  Aligned_cols=142  Identities=12%  Similarity=0.098  Sum_probs=110.5

Q ss_pred             CCeeecccceEEEEEEE-CCeEEEEEEeeccCCc--c-------hhh-----------------HHHHHHHHHhcCCCce
Q 026214           67 KNVITEDWGCILYKGFW-QERLISVMRFRESNRD--G-------HGS-----------------CINNIVYAAQMSHDHI  119 (241)
Q Consensus        67 ~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~--~-------~~~-----------------~~~E~~~l~~l~h~ni  119 (241)
                      ...||+|++|.||+|.+ +|+.||+|.++.....  .       ...                 ..+|+.++..+.++++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v   81 (190)
T cd05147           2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI   81 (190)
T ss_pred             CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            46899999999999998 8999999998764311  1       112                 2349999999988776


Q ss_pred             eeEeeEEecCCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHH-hCCCCCCeEEccCCCCCeeE
Q 026214          120 LKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYL-HFGFPRPIVYRDFKTAHILF  198 (241)
Q Consensus       120 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~l-H~~~~~~ivH~dlk~~Nill  198 (241)
                      .....+..  ...++||||++++++......     ...++...+..++.|++.+|.++ |   ..+|+||||||+|||+
T Consensus        82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~-----~~~~~~~~~~~i~~qi~~~L~~l~H---~~giiHrDlkP~NIli  151 (190)
T cd05147          82 PCPEPILL--KSHVLVMEFIGDDGWAAPRLK-----DAPLSESKARELYLQVIQIMRILYQ---DCRLVHADLSEYNLLY  151 (190)
T ss_pred             CCCcEEEe--cCCEEEEEEeCCCCCcchhhh-----cCCCCHHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEE
Confidence            44433322  234899999998776654322     24588899999999999999998 8   8899999999999999


Q ss_pred             cCCCcEEEccccCceecCCCC
Q 026214          199 NEENVAKMFDFSLSISIPEGG  219 (241)
Q Consensus       199 ~~~~~~ki~DfG~a~~~~~~~  219 (241)
                      + ++.++++|||+|.....+.
T Consensus       152 ~-~~~v~LiDFG~a~~~~~~~  171 (190)
T cd05147         152 H-DGKLYIIDVSQSVEHDHPH  171 (190)
T ss_pred             E-CCcEEEEEccccccCCCcC
Confidence            8 4789999999998765554

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.92  E-value=1.7e-24  Score=179.53  Aligned_cols=164  Identities=22%  Similarity=0.277  Sum_probs=137.1

Q ss_pred             CCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeC
Q 026214           64 YDQKNVITEDWGCILYKGFW--QERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESV  139 (241)
Q Consensus        64 ~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  139 (241)
                      |.....||+|.+|.||+|..  ++..+++|.+....  ....+.+..|+.+++.++|||++++++++...+..++++||+
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~   80 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC   80 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence            45567899999999999999  68999999987653  233467889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCC
Q 026214          140 EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGG  219 (241)
Q Consensus       140 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~  219 (241)
                      + ++|.+++...    ...+++..+..++.|++.||.|||   ..+++|+||+|+||+++.++.++|+|||++.......
T Consensus        81 ~-~~l~~~i~~~----~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~  152 (282)
T cd07829          81 D-MDLKKYLDKR----PGPLSPNLIKSIMYQLLRGLAYCH---SHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPL  152 (282)
T ss_pred             C-cCHHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChheEEEcCCCCEEEecCCcccccCCCc
Confidence            8 5999999664    246899999999999999999999   8999999999999999999999999999998775543


Q ss_pred             ccccceeecCCceeeeecC
Q 026214          220 TSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~e  238 (241)
                      ....   ....+..|.+||
T Consensus       153 ~~~~---~~~~~~~~~aPE  168 (282)
T cd07829         153 RTYT---HEVVTLWYRAPE  168 (282)
T ss_pred             cccC---ccccCcCcCChH
Confidence            2111   112233566776

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.92  E-value=3.8e-24  Score=179.33  Aligned_cols=150  Identities=18%  Similarity=0.263  Sum_probs=128.0

Q ss_pred             HhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC-cchhhHHHHHHHHHhc-CCCceeeEeeEEecCCcceEE
Q 026214           60 ATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR-DGHGSCINNIVYAAQM-SHDHILKLIGCCLETPIPILA  135 (241)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv  135 (241)
                      ..++|...+.||+|++|.||+|.+  ++..||+|.+..... .....+..|+.++... .||||+++++++.+....+++
T Consensus        13 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v   92 (296)
T cd06618          13 DLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFIC   92 (296)
T ss_pred             CcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEE
Confidence            345677889999999999999999  489999999876432 2345567788777777 599999999999999999999


Q ss_pred             EeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCC-CCeEEccCCCCCeeEcCCCcEEEccccCcee
Q 026214          136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFP-RPIVYRDFKTAHILFNEENVAKMFDFSLSIS  214 (241)
Q Consensus       136 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~-~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~  214 (241)
                      |||+. ++|.+++...    ...+++..+..++.|++.||.|||   + .+++|+||+|+||+++.++.++|+|||++..
T Consensus        93 ~e~~~-~~l~~l~~~~----~~~l~~~~~~~i~~~i~~~l~~lH---~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~  164 (296)
T cd06618          93 MELMS-TCLDKLLKRI----QGPIPEDILGKMTVAIVKALHYLK---EKHGVIHRDVKPSNILLDASGNVKLCDFGISGR  164 (296)
T ss_pred             eeccC-cCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---hhCCEecCCCcHHHEEEcCCCCEEECccccchh
Confidence            99986 5888877554    346899999999999999999999   6 5899999999999999999999999999987


Q ss_pred             cCC
Q 026214          215 IPE  217 (241)
Q Consensus       215 ~~~  217 (241)
                      +..
T Consensus       165 ~~~  167 (296)
T cd06618         165 LVD  167 (296)
T ss_pred             ccC
Confidence            654

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.92  E-value=7.8e-24  Score=175.95  Aligned_cols=164  Identities=21%  Similarity=0.251  Sum_probs=131.9

Q ss_pred             CCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC--cchhhHHHHHHHHHhc---CCCceeeEeeEEecCCc-----
Q 026214           64 YDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR--DGHGSCINNIVYAAQM---SHDHILKLIGCCLETPI-----  131 (241)
Q Consensus        64 ~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~-----  131 (241)
                      |...+.||.|++|.||+|.+  ++..||+|.+.....  .....+.+|+.++.++   +|||++++++++...+.     
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~   80 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK   80 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence            45678899999999999999  589999999875322  1234566788777666   59999999999988776     


Q ss_pred             ceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccC
Q 026214          132 PILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL  211 (241)
Q Consensus       132 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~  211 (241)
                      .+++|||+. ++|.+++...   ....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||+
T Consensus        81 ~~l~~e~~~-~~l~~~l~~~---~~~~l~~~~~~~~~~~i~~al~~LH---~~~i~h~~l~~~nili~~~~~~~l~dfg~  153 (287)
T cd07838          81 LTLVFEHVD-QDLATYLSKC---PKPGLPPETIKDLMRQLLRGVDFLH---SHRIVHRDLKPQNILVTSDGQVKIADFGL  153 (287)
T ss_pred             eEEEehhcc-cCHHHHHHHc---cCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhEEEccCCCEEEeccCc
Confidence            899999997 5899988664   2235899999999999999999999   99999999999999999999999999999


Q ss_pred             ceecCCCCccccceeecCCceeeeecC
Q 026214          212 SISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       212 a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +..+.........    ..+..|++||
T Consensus       154 ~~~~~~~~~~~~~----~~~~~~~~PE  176 (287)
T cd07838         154 ARIYSFEMALTSV----VVTLWYRAPE  176 (287)
T ss_pred             ceeccCCcccccc----cccccccChH
Confidence            9887654322111    1234466666

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.91  E-value=3.6e-25  Score=178.53  Aligned_cols=164  Identities=20%  Similarity=0.251  Sum_probs=136.0

Q ss_pred             HhcCCCc-CCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhc-CCCceeeEeeEEec----CCc
Q 026214           60 ATNNYDQ-KNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQM-SHDHILKLIGCCLE----TPI  131 (241)
Q Consensus        60 ~~~~~~~-~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~----~~~  131 (241)
                      .+.+|.+ .++||-|-.|.|-.+..  ++..+|+|.+.+.     ....+|+++.-.. .|||||+++++|..    ...
T Consensus        59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkc  133 (400)
T KOG0604|consen   59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKC  133 (400)
T ss_pred             chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCcee
Confidence            4556653 47899999999999998  8999999988654     4467888876555 79999999999854    346


Q ss_pred             ceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcC---CCcEEEcc
Q 026214          132 PILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNE---ENVAKMFD  208 (241)
Q Consensus       132 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~---~~~~ki~D  208 (241)
                      +++|||.|+||.|...+...   ....+++..+..|+.||+.|+.|||   +.+|.||||||+|+|...   +..+|++|
T Consensus       134 LLiVmE~meGGeLfsriq~~---g~~afTErea~eI~~qI~~Av~~lH---~~nIAHRDlKpENLLyt~t~~na~lKLtD  207 (400)
T KOG0604|consen  134 LLIVMECMEGGELFSRIQDR---GDQAFTEREASEIMKQIGLAVRYLH---SMNIAHRDLKPENLLYTTTSPNAPLKLTD  207 (400)
T ss_pred             eEeeeecccchHHHHHHHHc---ccccchHHHHHHHHHHHHHHHHHHH---hcchhhccCChhheeeecCCCCcceEecc
Confidence            78899999999999999887   4567999999999999999999999   999999999999999964   56799999


Q ss_pred             ccCceecCCCCccccceeecCCceeeeecC
Q 026214          209 FSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       209 fG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ||+|+.-..+....+    +..++-|+|||
T Consensus       208 fGFAK~t~~~~~L~T----Pc~TPyYvaPe  233 (400)
T KOG0604|consen  208 FGFAKETQEPGDLMT----PCFTPYYVAPE  233 (400)
T ss_pred             cccccccCCCccccC----CcccccccCHH
Confidence            999998765544443    44566777887

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.91  E-value=2.1e-25  Score=181.97  Aligned_cols=166  Identities=18%  Similarity=0.155  Sum_probs=141.3

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC---cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR---DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      ++|+..++||+|.||.|-.+..  +++.+|+|++++.-.   ......+.|-++|+..+||.+..|-..|+..+.+++||
T Consensus       168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVM  247 (516)
T KOG0690|consen  168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVM  247 (516)
T ss_pred             chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEE
Confidence            6788899999999999999988  899999999987532   23455688999999999999999988899999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||..||.|.-.+...     ..+++.....+-..|+.||.|||   +.+||.||||.+|.|+|.+|++||+|||+++.--
T Consensus       248 eyanGGeLf~HLsre-----r~FsE~RtRFYGaEIvsAL~YLH---s~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I  319 (516)
T KOG0690|consen  248 EYANGGELFFHLSRE-----RVFSEDRTRFYGAEIVSALGYLH---SRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEI  319 (516)
T ss_pred             EEccCceEeeehhhh-----hcccchhhhhhhHHHHHHhhhhh---hCCeeeeechhhhheeccCCceEeeecccchhcc
Confidence            999999999888553     45889999999999999999999   9999999999999999999999999999998543


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ..+.   +.-.-.+++-|.|||
T Consensus       320 ~~g~---t~kTFCGTPEYLAPE  338 (516)
T KOG0690|consen  320 KYGD---TTKTFCGTPEYLAPE  338 (516)
T ss_pred             cccc---eeccccCChhhcCch
Confidence            3332   222334566778887

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.91  E-value=7.1e-24  Score=172.79  Aligned_cols=141  Identities=19%  Similarity=0.205  Sum_probs=126.2

Q ss_pred             eecccceEEEEEEE--CCeEEEEEEeeccCCc---chhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCCCCCH
Q 026214           70 ITEDWGCILYKGFW--QERLISVMRFRESNRD---GHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNL  144 (241)
Q Consensus        70 lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL  144 (241)
                      ||.|++|.||++.+  ++..+++|.+......   ....+..|+.+++.++||||+++++.+..++..+++|||+++++|
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   80 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL   80 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence            68999999999998  6889999998764322   345788999999999999999999999999999999999999999


Q ss_pred             HHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          145 RDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       145 ~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      .+++...     ..+++..+..++.|++.||.|||   ..+++|+||+|+||+++.++.++|+|||++......
T Consensus        81 ~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lh---~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~  146 (250)
T cd05123          81 FSHLSKE-----GRFSEERARFYAAEIVLALEYLH---SLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSE  146 (250)
T ss_pred             HHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcceEEEcCCCcEEEeecCcceecccC
Confidence            9999554     35899999999999999999999   999999999999999999999999999999877554

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.91  E-value=1.4e-23  Score=165.35  Aligned_cols=142  Identities=12%  Similarity=0.110  Sum_probs=112.5

Q ss_pred             CCeeecccceEEEEEEE-CCeEEEEEEeeccCCcc--------------------------hhhHHHHHHHHHhcCCCce
Q 026214           67 KNVITEDWGCILYKGFW-QERLISVMRFRESNRDG--------------------------HGSCINNIVYAAQMSHDHI  119 (241)
Q Consensus        67 ~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~--------------------------~~~~~~E~~~l~~l~h~ni  119 (241)
                      ...||+|++|.||+|.+ +|..||||.+.......                          ...+..|...+.++.|+++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   81 (190)
T cd05145           2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV   81 (190)
T ss_pred             CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            46899999999999998 79999999988653210                          1123578899999999987


Q ss_pred             eeEeeEEecCCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCC-CCeEEccCCCCCeeE
Q 026214          120 LKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFP-RPIVYRDFKTAHILF  198 (241)
Q Consensus       120 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~-~~ivH~dlk~~Nill  198 (241)
                      .....+...  ..++||||++++++......     ...++......++.|++.++.++|   . .+|+||||||+|||+
T Consensus        82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~-----~~~~~~~~~~~i~~~l~~~l~~lH---~~~givHrDlkP~NIll  151 (190)
T cd05145          82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLK-----DVPLEEEEAEELYEQVVEQMRRLY---QEAGLVHGDLSEYNILY  151 (190)
T ss_pred             CCceEEEec--CCEEEEEEecCCCchhhhhh-----hccCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCChhhEEE
Confidence            555444333  34899999998755443212     234678888999999999999999   8 999999999999999


Q ss_pred             cCCCcEEEccccCceecCCCC
Q 026214          199 NEENVAKMFDFSLSISIPEGG  219 (241)
Q Consensus       199 ~~~~~~ki~DfG~a~~~~~~~  219 (241)
                      + ++.++|+|||+|..++.+.
T Consensus       152 ~-~~~~~liDFG~a~~~~~~~  171 (190)
T cd05145         152 H-DGKPYIIDVSQAVELDHPN  171 (190)
T ss_pred             E-CCCEEEEEcccceecCCCC
Confidence            8 7899999999999887653

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.91  E-value=1.6e-23  Score=201.18  Aligned_cols=157  Identities=24%  Similarity=0.286  Sum_probs=129.9

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeC
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESV  139 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  139 (241)
                      ..|.....||+|+||.||+|.+  ++..||+|++.....    ....|+..+++++||||+++++++.+.+..++||||+
T Consensus       690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~  765 (968)
T PLN00113        690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS----IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYI  765 (968)
T ss_pred             hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc----ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCC
Confidence            4577788999999999999997  789999999865432    1235688899999999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCC
Q 026214          140 EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGG  219 (241)
Q Consensus       140 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~  219 (241)
                      ++|+|.+++.        .++|..+..++.|++.||.|||..++.+++|||+||+||+++.++.+++. ||.+.....+.
T Consensus       766 ~~g~L~~~l~--------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~~  836 (968)
T PLN00113        766 EGKNLSEVLR--------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTDT  836 (968)
T ss_pred             CCCcHHHHHh--------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccCC
Confidence            9999999993        27899999999999999999997666799999999999999998888875 66655443221


Q ss_pred             ccccceeecCCceeeeecC
Q 026214          220 TSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~e  238 (241)
                      ..       ..+..|+|||
T Consensus       837 ~~-------~~t~~y~aPE  848 (968)
T PLN00113        837 KC-------FISSAYVAPE  848 (968)
T ss_pred             Cc-------cccccccCcc
Confidence            11       2345688888

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.91  E-value=5.6e-24  Score=174.74  Aligned_cols=168  Identities=16%  Similarity=0.129  Sum_probs=132.4

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC-----CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEE
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN-----RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA  135 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  135 (241)
                      .|...+.||+|+||.||++.+  .+..+++|.++...     ......+..|+.++..++||||+++++++.+....+++
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII   80 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence            367788999999999999988  44556666554321     12334567889999999999999999999999999999


Q ss_pred             EeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceec
Q 026214          136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI  215 (241)
Q Consensus       136 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~  215 (241)
                      +||+++++|.+++..... ....+++..+..++.|++.||.|||   +.+++|+||+|+||+++. +.++|+|||++..+
T Consensus        81 ~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~  155 (260)
T cd08222          81 TEYCEGRDLDCKLEELKH-TGKTLSENQVCEWFIQLLLGVHYMH---QRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLL  155 (260)
T ss_pred             EEeCCCCCHHHHHHHHhh-cccccCHHHHHHHHHHHHHHHHHHH---HcCccccCCChhheEeec-CCEeecccCceeec
Confidence            999999999999865321 2456899999999999999999999   999999999999999975 56999999999877


Q ss_pred             CCCCccccceeecCCceeeeecC
Q 026214          216 PEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ..+....   ....++..|.+||
T Consensus       156 ~~~~~~~---~~~~~~~~~~~pe  175 (260)
T cd08222         156 MGSCDLA---TTFTGTPYYMSPE  175 (260)
T ss_pred             CCCcccc---cCCCCCcCccCHH
Confidence            5433211   1122344566776

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.91  E-value=2.7e-24  Score=184.12  Aligned_cols=150  Identities=17%  Similarity=0.247  Sum_probs=129.3

Q ss_pred             HHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCc---
Q 026214           59 LATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPI---  131 (241)
Q Consensus        59 ~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---  131 (241)
                      ...++|.....||+|++|.||+|.+  ++..||+|.+....  ......+.+|+.+++.++|||++++.+++...+.   
T Consensus        12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   91 (343)
T cd07851          12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED   91 (343)
T ss_pred             cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence            3457788899999999999999999  68899999886432  2234567889999999999999999988866554   


Q ss_pred             ---ceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEcc
Q 026214          132 ---PILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFD  208 (241)
Q Consensus       132 ---~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~D  208 (241)
                         .++++||+. ++|.+++..      ..+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|
T Consensus        92 ~~~~~lv~e~~~-~~L~~~~~~------~~l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nill~~~~~~kL~d  161 (343)
T cd07851          92 FQDVYLVTHLMG-ADLNNIVKC------QKLSDDHIQFLVYQILRGLKYIH---SAGIIHRDLKPSNIAVNEDCELKILD  161 (343)
T ss_pred             cccEEEEEecCC-CCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEcc
Confidence               899999984 699999843      45899999999999999999999   99999999999999999999999999


Q ss_pred             ccCceecCCC
Q 026214          209 FSLSISIPEG  218 (241)
Q Consensus       209 fG~a~~~~~~  218 (241)
                      ||++.....+
T Consensus       162 fg~~~~~~~~  171 (343)
T cd07851         162 FGLARHTDDE  171 (343)
T ss_pred             cccccccccc
Confidence            9999876543

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.91  E-value=1.4e-23  Score=191.61  Aligned_cols=180  Identities=19%  Similarity=0.251  Sum_probs=148.2

Q ss_pred             HHHHHhcCCCcCCeeecccceEEEEEEE-----C----CeEEEEEEeeccC-CcchhhHHHHHHHHHhc-CCCceeeEee
Q 026214           56 ELKLATNNYDQKNVITEDWGCILYKGFW-----Q----ERLISVMRFRESN-RDGHGSCINNIVYAAQM-SHDHILKLIG  124 (241)
Q Consensus        56 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-----~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~  124 (241)
                      .++....+....+.||+|.||.|++|..     .    ...||||.++... ....+.+..|+.++..+ .||||+.++|
T Consensus       290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG  369 (609)
T KOG0200|consen  290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLG  369 (609)
T ss_pred             ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhhee
Confidence            4556666666777999999999999986     1    4679999988653 23567899999999999 7999999999


Q ss_pred             EEecCCcceEEEeeCCCCCHHHHHhhcC---CCCC--------CCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCC
Q 026214          125 CCLETPIPILAFESVEYGNLRDRILSAS---QPQT--------EPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKT  193 (241)
Q Consensus       125 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~---~~~~--------~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~  193 (241)
                      +|...+..++|+||+..|+|.+++....   ....        ..++..+.+.++.||+.|+.||+   +.++|||||-+
T Consensus       370 ~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~---~~~~vHRDLAa  446 (609)
T KOG0200|consen  370 ACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLA---SVPCVHRDLAA  446 (609)
T ss_pred             eeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHh---hCCccchhhhh
Confidence            9999999999999999999999998774   1011        24889999999999999999999   99999999999


Q ss_pred             CCeeEcCCCcEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          194 AHILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       194 ~Nill~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +|||+..+..+||+|||+|+....+.........++.+--|+|||
T Consensus       447 RNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApE  491 (609)
T KOG0200|consen  447 RNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPE  491 (609)
T ss_pred             hhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHH
Confidence            999999999999999999998776655543333333344568877

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.90  E-value=2.8e-26  Score=181.24  Aligned_cols=169  Identities=17%  Similarity=0.224  Sum_probs=133.0

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeec--cCCcchhhHHHHHHHHHhcCCCceeeEeeEEecC--------
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRE--SNRDGHGSCINNIVYAAQMSHDHILKLIGCCLET--------  129 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--------  129 (241)
                      +.|....+||+|.||.||+|..  +++.||+|++--  .........++|+.+|..++|+|++.++..|...        
T Consensus        17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r   96 (376)
T KOG0669|consen   17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR   96 (376)
T ss_pred             hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence            3455567899999999999988  788899886532  2333456679999999999999999999888532        


Q ss_pred             CcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccc
Q 026214          130 PIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDF  209 (241)
Q Consensus       130 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~Df  209 (241)
                      ..+||||.+|+. +|.-++...    ...++...+..++.++..||.|+|   ...|+|||+||.|+||+.++.+||+||
T Consensus        97 ~t~ylVf~~ceh-DLaGlLsn~----~vr~sls~Ikk~Mk~Lm~GL~~iH---r~kilHRDmKaaNvLIt~dgilklADF  168 (376)
T KOG0669|consen   97 ATFYLVFDFCEH-DLAGLLSNR----KVRFSLSEIKKVMKGLMNGLYYIH---RNKILHRDMKAANVLITKDGILKLADF  168 (376)
T ss_pred             ceeeeeHHHhhh-hHHHHhcCc----cccccHHHHHHHHHHHHHHHHHHH---HhhHHhhcccHhhEEEcCCceEEeecc
Confidence            248999999985 999998554    355889999999999999999999   999999999999999999999999999


Q ss_pred             cCceecCCCCccccceee-cCCceeeeecC
Q 026214          210 SLSISIPEGGTSGAKCLK-SERTEICCVRE  238 (241)
Q Consensus       210 G~a~~~~~~~~~~~~~~~-~~~~~~~~~~e  238 (241)
                      |+++.+...........+ ---+-||.+||
T Consensus       169 Glar~fs~~~n~~kprytnrvvTLwYrppE  198 (376)
T KOG0669|consen  169 GLARAFSTSKNVVKPRYTNRVVTLWYRPPE  198 (376)
T ss_pred             ccccceecccccCCCCcccceeeeecCCHH
Confidence            999876543222111111 11255777776

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.90  E-value=2.2e-23  Score=174.77  Aligned_cols=168  Identities=15%  Similarity=0.078  Sum_probs=119.9

Q ss_pred             cCCCcCCeeecccceEEEEEEE--C---CeEEEEEEeeccCCcch-----------hhHHHHHHHHHhcCCCceeeEeeE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--Q---ERLISVMRFRESNRDGH-----------GSCINNIVYAAQMSHDHILKLIGC  125 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~---~~~vavK~~~~~~~~~~-----------~~~~~E~~~l~~l~h~niv~l~~~  125 (241)
                      +.|...++||+|+||.||+|.+  +   +..+++|..........           .....++..+..++|+|+++++++
T Consensus        12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~   91 (294)
T PHA02882         12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC   91 (294)
T ss_pred             CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence            5688899999999999999998  3   34566665433221110           112233445566789999999988


Q ss_pred             EecCC----cceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCC
Q 026214          126 CLETP----IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEE  201 (241)
Q Consensus       126 ~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~  201 (241)
                      +....    ..+++++++. .++.+.+...     ...++..+..++.|++.||.|||   +.+++||||||+|||++.+
T Consensus        92 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH---~~~iiHrDiKp~Nill~~~  162 (294)
T PHA02882         92 GSFKRCRMYYRFILLEKLV-ENTKEIFKRI-----KCKNKKLIKNIMKDMLTTLEYIH---EHGISHGDIKPENIMVDGN  162 (294)
T ss_pred             eeEecCCceEEEEEEehhc-cCHHHHHHhh-----ccCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCC
Confidence            76543    3467778775 4777776443     23567888999999999999999   9999999999999999999


Q ss_pred             CcEEEccccCceecCCCCcccc----ceeecCCceeeeecC
Q 026214          202 NVAKMFDFSLSISIPEGGTSGA----KCLKSERTEICCVRE  238 (241)
Q Consensus       202 ~~~ki~DfG~a~~~~~~~~~~~----~~~~~~~~~~~~~~e  238 (241)
                      +.++|+|||+|+.+..++....    ......++..|.+||
T Consensus       163 ~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape  203 (294)
T PHA02882        163 NRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLD  203 (294)
T ss_pred             CcEEEEEcCCceeeccCCcccccccccccccCCCccccCHH
Confidence            9999999999988754332111    111123455667776

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.90  E-value=2.8e-23  Score=168.77  Aligned_cols=147  Identities=16%  Similarity=0.146  Sum_probs=122.0

Q ss_pred             ccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCCCCCHHHHHhh
Q 026214           73 DWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILS  150 (241)
Q Consensus        73 G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~  150 (241)
                      |.+|.||++.+  ++..+|+|.+....     .+.+|...+....||||+++++++...+..+++|||+++++|.+++..
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   78 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK   78 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence            88999999999  88999999987643     233455555566799999999999999999999999999999999965


Q ss_pred             cCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCccccceeecCC
Q 026214          151 ASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSER  230 (241)
Q Consensus       151 ~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~  230 (241)
                      .     ..+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.++++|||++..+......      ...
T Consensus        79 ~-----~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~------~~~  144 (237)
T cd05576          79 F-----LNIPEECVKRWAAEMVVALDALH---REGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDG------EAV  144 (237)
T ss_pred             h-----cCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCEEEecccchhcccccccc------CCc
Confidence            4     34899999999999999999999   999999999999999999999999999988766443211      112


Q ss_pred             ceeeeecC
Q 026214          231 TEICCVRE  238 (241)
Q Consensus       231 ~~~~~~~e  238 (241)
                      +..|++||
T Consensus       145 ~~~y~aPE  152 (237)
T cd05576         145 ENMYCAPE  152 (237)
T ss_pred             CccccCCc
Confidence            33567777

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.90  E-value=7.8e-24  Score=182.60  Aligned_cols=168  Identities=16%  Similarity=0.125  Sum_probs=139.7

Q ss_pred             hcCCCcCCeeecccceEEEEEEE-CCeEEEEEEeecc--CCcchhhHHHHHHHHHhc-CCCceeeEeeEEecCCcceEEE
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW-QERLISVMRFRES--NRDGHGSCINNIVYAAQM-SHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      ...|...++||+||.+.||++.. +...+|+|++...  +.+....|.+|+.+|.+| .|.+|++|++|-..++.+||||
T Consensus       360 g~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvm  439 (677)
T KOG0596|consen  360 GREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVM  439 (677)
T ss_pred             cchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEe
Confidence            35577889999999999999998 6677888876543  344567899999999999 6999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||=+ .+|..+|....    ..++...+..+..|++.|+.++|   ..+|||.||||.|+|+ -.|.+||+|||+|..+.
T Consensus       440 E~Gd-~DL~kiL~k~~----~~~~~~~lk~ywkqML~aV~~IH---~~gIVHSDLKPANFLl-VkG~LKLIDFGIA~aI~  510 (677)
T KOG0596|consen  440 ECGD-IDLNKILKKKK----SIDPDWFLKFYWKQMLLAVKTIH---QHGIVHSDLKPANFLL-VKGRLKLIDFGIANAIQ  510 (677)
T ss_pred             eccc-ccHHHHHHhcc----CCCchHHHHHHHHHHHHHHHHHH---HhceeecCCCcccEEE-EeeeEEeeeechhcccC
Confidence            9654 69999997662    22332377889999999999999   9999999999999999 45899999999999999


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ++.+... .-...+|..|++||
T Consensus       511 ~DTTsI~-kdsQvGT~NYMsPE  531 (677)
T KOG0596|consen  511 PDTTSIV-KDSQVGTVNYMSPE  531 (677)
T ss_pred             cccccee-eccccCcccccCHH
Confidence            8865533 23344677888888

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.89  E-value=3.7e-22  Score=159.60  Aligned_cols=149  Identities=24%  Similarity=0.283  Sum_probs=132.7

Q ss_pred             CCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCc-chhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCC
Q 026214           64 YDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRD-GHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVE  140 (241)
Q Consensus        64 ~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~  140 (241)
                      |...+.||.|++|.||++..  ++..+++|.+...... ..+.+.+|+..+..++|+|++++++++......++++|+++
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE   80 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence            45568899999999999999  4789999999876544 56788999999999999999999999999899999999999


Q ss_pred             CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCC
Q 026214          141 YGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGG  219 (241)
Q Consensus       141 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~  219 (241)
                      +++|.+++....    ..+++..+..++.+++.++.+||   ..+++|+|++|+||+++.++.++|+|||++..+..+.
T Consensus        81 ~~~L~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~  152 (225)
T smart00221       81 GGDLFDYLRKKG----GKLSEEEARFYLRQILEALEYLH---SLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDL  152 (225)
T ss_pred             CCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcc
Confidence            889999996651    11788999999999999999999   8899999999999999999999999999999886553

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.89  E-value=3.7e-23  Score=179.29  Aligned_cols=148  Identities=18%  Similarity=0.166  Sum_probs=126.9

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCc--------chhhHHHHHHHHHhcC---CCceeeEeeEEec
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRD--------GHGSCINNIVYAAQMS---HDHILKLIGCCLE  128 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~---h~niv~l~~~~~~  128 (241)
                      ..|...+.+|+|+||.|+.|.+  +...|+||.+.+...-        ..-..=.|+.+|+.++   |+||++++++|++
T Consensus       561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd  640 (772)
T KOG1152|consen  561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED  640 (772)
T ss_pred             ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence            4478889999999999999999  6778999988764211        1122346899999997   9999999999999


Q ss_pred             CCcceEEEeeC-CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEc
Q 026214          129 TPIPILAFESV-EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMF  207 (241)
Q Consensus       129 ~~~~~lv~e~~-~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~  207 (241)
                      +++.||+||-- ++-+|.+++...     ..+++.....|+.||+.|+.+||   ..+|||||||-+|++++.+|.+|++
T Consensus       641 dd~yyl~te~hg~gIDLFd~IE~k-----p~m~E~eAk~IFkQV~agi~hlh---~~~ivhrdikdenvivd~~g~~kli  712 (772)
T KOG1152|consen  641 DDYYYLETEVHGEGIDLFDFIEFK-----PRMDEPEAKLIFKQVVAGIKHLH---DQGIVHRDIKDENVIVDSNGFVKLI  712 (772)
T ss_pred             CCeeEEEecCCCCCcchhhhhhcc-----CccchHHHHHHHHHHHhcccccc---ccCceecccccccEEEecCCeEEEe
Confidence            99999999965 345899999554     45899999999999999999999   9999999999999999999999999


Q ss_pred             cccCceecCC
Q 026214          208 DFSLSISIPE  217 (241)
Q Consensus       208 DfG~a~~~~~  217 (241)
                      |||.|....+
T Consensus       713 dfgsaa~~ks  722 (772)
T KOG1152|consen  713 DFGSAAYTKS  722 (772)
T ss_pred             eccchhhhcC
Confidence            9999987644

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.89  E-value=6.9e-23  Score=185.51  Aligned_cols=170  Identities=18%  Similarity=0.125  Sum_probs=116.0

Q ss_pred             HhcCCCcCCeeecccceEEEEEEE--C----CeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeE------Ee
Q 026214           60 ATNNYDQKNVITEDWGCILYKGFW--Q----ERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGC------CL  127 (241)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~--~----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~------~~  127 (241)
                      ..++|...+.||+|+||.||+|.+  +    +..||+|++....  ..+.+..+  .+....+.++..+...      ..
T Consensus       130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~--~~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~  205 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYG--AVEIWMNE--RVRRACPNSCADFVYGFLEPVSSK  205 (566)
T ss_pred             ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccc--hhHHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence            567899999999999999999998  5    7899999876432  11112221  1122222222222211      23


Q ss_pred             cCCcceEEEeeCCCCCHHHHHhhcCCC---------------CCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCC
Q 026214          128 ETPIPILAFESVEYGNLRDRILSASQP---------------QTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFK  192 (241)
Q Consensus       128 ~~~~~~lv~e~~~~gsL~~~l~~~~~~---------------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk  192 (241)
                      .....++++||+.+++|.+++......               .........+..++.|++.||.|||   +.+|+|||||
T Consensus       206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH---~~gIiHRDLK  282 (566)
T PLN03225        206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLH---STGIVHRDVK  282 (566)
T ss_pred             cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHH---HCCEEeCcCC
Confidence            456789999999999999998654110               0001123345679999999999999   9999999999


Q ss_pred             CCCeeEcC-CCcEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          193 TAHILFNE-ENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       193 ~~Nill~~-~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |+|||++. ++.+||+|||+|+.+...........  ..+..|+|||
T Consensus       283 P~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~--~~t~~Y~APE  327 (566)
T PLN03225        283 PQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEF--LLDPRYAAPE  327 (566)
T ss_pred             HHHEEEeCCCCcEEEEeCCCccccccccccCCccc--ccCCCccChH
Confidence            99999986 68999999999987654433222222  2234678887

>PRK10345 hypothetical protein; Provisional

Probab=99.88  E-value=3.9e-22  Score=158.77  Aligned_cols=141  Identities=14%  Similarity=0.096  Sum_probs=109.0

Q ss_pred             CCcCCeeecccceEEEEEEECCeEEEEEEeeccCCcchhhHHHHHHHHHhc-----CCCceeeEeeEEecCC---c-ceE
Q 026214           64 YDQKNVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQM-----SHDHILKLIGCCLETP---I-PIL  134 (241)
Q Consensus        64 ~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~l~~~~~~~~---~-~~l  134 (241)
                      +....+||+|++|.||.-..++.. +||++........+.+.+|+.++..+     +||||++++|++.++.   . ..+
T Consensus         4 L~~~~~LG~G~~~~Vy~hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~   82 (210)
T PRK10345          4 LSEQSPLGTGRHRKCYAHPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDV   82 (210)
T ss_pred             cCCcceecCCCceEEEECCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEE
Confidence            455789999999999962224444 68887765444567799999999999     5799999999998864   3 337


Q ss_pred             EEee--CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHH-HHHhCCCCCCeEEccCCCCCeeEcC----CCcEEEc
Q 026214          135 AFES--VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHAL-AYLHFGFPRPIVYRDFKTAHILFNE----ENVAKMF  207 (241)
Q Consensus       135 v~e~--~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l-~~lH~~~~~~ivH~dlk~~Nill~~----~~~~ki~  207 (241)
                      |+||  +.++||.+++...      .+++.  ..++.+++.++ .|||   +.+|+||||||+|||++.    +..++|+
T Consensus        83 I~e~~G~~~~tL~~~l~~~------~~~e~--~~~~~~~L~~l~~yLh---~~~IvhrDlKp~NILl~~~~~~~~~~~Li  151 (210)
T PRK10345         83 IADFDGKPSITLTEFAEQC------RYEED--VAQLRQLLKKLKRYLL---DNRIVTMELKPQNILCQRISESEVIPVVC  151 (210)
T ss_pred             EecCCCCcchhHHHHHHcc------cccHh--HHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEeccCCCCCcEEEE
Confidence            8999  5578999999442      24544  35678888888 8999   999999999999999974    3479999


Q ss_pred             c-ccCceecC
Q 026214          208 D-FSLSISIP  216 (241)
Q Consensus       208 D-fG~a~~~~  216 (241)
                      | ||.+..++
T Consensus       152 Dg~G~~~~ip  161 (210)
T PRK10345        152 DNIGESTFIP  161 (210)
T ss_pred             ECCCCcceee
Confidence            9 55555433

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.88  E-value=1.7e-21  Score=153.26  Aligned_cols=142  Identities=23%  Similarity=0.324  Sum_probs=127.2

Q ss_pred             eecccceEEEEEEEC--CeEEEEEEeeccCCc-chhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCCCCCHHH
Q 026214           70 ITEDWGCILYKGFWQ--ERLISVMRFRESNRD-GHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRD  146 (241)
Q Consensus        70 lg~G~~g~Vy~~~~~--~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~  146 (241)
                      ||+|.+|.||++...  +..+++|.+...... ....+.+|+..+..+.|++++++++++......++++|++++++|.+
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~   80 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD   80 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence            689999999999993  899999998876432 34678999999999999999999999999899999999999899999


Q ss_pred             HHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcC-CCcEEEccccCceecCCC
Q 026214          147 RILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNE-ENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       147 ~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~-~~~~ki~DfG~a~~~~~~  218 (241)
                      ++...    ...+++..+..++.+++.++.+||   ..+++|+||+|.||+++. ++.++|+|||.+......
T Consensus        81 ~~~~~----~~~~~~~~~~~~~~~l~~~l~~lh---~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~  146 (215)
T cd00180          81 LLKEN----EGKLSEDEILRILLQILEGLEYLH---SNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSD  146 (215)
T ss_pred             HHHhc----cCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCC
Confidence            99654    145889999999999999999999   899999999999999999 899999999999877654

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.88  E-value=1.7e-23  Score=163.40  Aligned_cols=149  Identities=16%  Similarity=0.244  Sum_probs=128.7

Q ss_pred             HhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcC-CCceeeEeeEEecC--CcceE
Q 026214           60 ATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMS-HDHILKLIGCCLET--PIPIL  134 (241)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~--~~~~l  134 (241)
                      ..++|...+++|.|.++.|+.|..  ++..++||.+++..   .+...+|+.+|..|. ||||++++++..++  ..+.|
T Consensus        36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaL  112 (338)
T KOG0668|consen   36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK---KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSL  112 (338)
T ss_pred             ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH---HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchh
Confidence            346677888999999999999997  88899999998764   356789999999996 99999999998764  57899


Q ss_pred             EEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCC-CcEEEccccCce
Q 026214          135 AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEE-NVAKMFDFSLSI  213 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~-~~~ki~DfG~a~  213 (241)
                      ++||+.+.+...+.        +.++..++..++.+++.||.|+|   +.||+|||+||.|++||.. -.++++|+|+|.
T Consensus       113 iFE~v~n~Dfk~ly--------~tl~d~dIryY~~elLkALdyCH---S~GImHRDVKPhNvmIdh~~rkLrlIDWGLAE  181 (338)
T KOG0668|consen  113 IFEYVNNTDFKQLY--------PTLTDYDIRYYIYELLKALDYCH---SMGIMHRDVKPHNVMIDHELRKLRLIDWGLAE  181 (338)
T ss_pred             HhhhhccccHHHHh--------hhhchhhHHHHHHHHHHHHhHHH---hcCcccccCCcceeeechhhceeeeeecchHh
Confidence            99999987776665        33777889999999999999999   9999999999999999875 469999999999


Q ss_pred             ecCCCCccc
Q 026214          214 SIPEGGTSG  222 (241)
Q Consensus       214 ~~~~~~~~~  222 (241)
                      ++-+.....
T Consensus       182 FYHp~~eYn  190 (338)
T KOG0668|consen  182 FYHPGKEYN  190 (338)
T ss_pred             hcCCCceee
Confidence            998775543

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.88  E-value=3.4e-23  Score=173.66  Aligned_cols=166  Identities=18%  Similarity=0.184  Sum_probs=137.9

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC---cchhhHHHHHHHHHhc-CCCceeeEeeEEecCCcceE
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR---DGHGSCINNIVYAAQM-SHDHILKLIGCCLETPIPIL  134 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l  134 (241)
                      ...|+...+||+|+||.|-.+..  +...+|||+++++-.   .+.+-.+.|-++|+.. +-|.++++..+++.-+.+|+
T Consensus       348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyF  427 (683)
T KOG0696|consen  348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYF  427 (683)
T ss_pred             ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheee
Confidence            35688889999999999999988  778899999987531   2334467788888877 67889999999999999999


Q ss_pred             EEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCcee
Q 026214          135 AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSIS  214 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~  214 (241)
                      ||||+.||+|.-.+..     -+.+.++.+..++..|+-||-+||   +.+|+.||||.+|||+|.+|++||+|||+++.
T Consensus       428 VMEyvnGGDLMyhiQQ-----~GkFKEp~AvFYAaEiaigLFFLh---~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKE  499 (683)
T KOG0696|consen  428 VMEYVNGGDLMYHIQQ-----VGKFKEPVAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKE  499 (683)
T ss_pred             EEEEecCchhhhHHHH-----hcccCCchhhhhhHHHHHHhhhhh---cCCeeeeeccccceEeccCCceEeeecccccc
Confidence            9999999999888844     455888889999999999999999   99999999999999999999999999999985


Q ss_pred             cCCCC-ccccceeecCCceeeeecC
Q 026214          215 IPEGG-TSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       215 ~~~~~-~~~~~~~~~~~~~~~~~~e  238 (241)
                      --.++ ++.+    -.+++-|+|||
T Consensus       500 ni~~~~TTkT----FCGTPdYiAPE  520 (683)
T KOG0696|consen  500 NIFDGVTTKT----FCGTPDYIAPE  520 (683)
T ss_pred             cccCCcceee----ecCCCcccccc
Confidence            54433 3333    33455677777

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.87  E-value=1.5e-23  Score=184.18  Aligned_cols=169  Identities=21%  Similarity=0.213  Sum_probs=145.8

Q ss_pred             HHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           59 LATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        59 ~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      ...+.|.....+|.|+||.||++++  ++...|+|.++-....+.+-...|+-+++..+||||+.++|.+......|+.|
T Consensus        12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicM   91 (829)
T KOG0576|consen   12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICM   91 (829)
T ss_pred             CCccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEE
Confidence            4557788899999999999999999  88999999998776666777788999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      |||.+|+|.+..+.     .+++++..+..++...+.||.|||   +.+-+|||||-.|||+++.|.+|+.|||.+..++
T Consensus        92 EycgggslQdiy~~-----TgplselqiayvcRetl~gl~ylh---s~gk~hRdiKGanilltd~gDvklaDfgvsaqit  163 (829)
T KOG0576|consen   92 EYCGGGSLQDIYHV-----TGPLSELQIAYVCRETLQGLKYLH---SQGKIHRDIKGANILLTDEGDVKLADFGVSAQIT  163 (829)
T ss_pred             EecCCCcccceeee-----cccchhHHHHHHHhhhhccchhhh---cCCcccccccccceeecccCceeecccCchhhhh
Confidence            99999999998854     467999999999999999999999   9999999999999999999999999999998776


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .--.....   --++.-|+|||
T Consensus       164 ati~Krks---fiGtpywmapE  182 (829)
T KOG0576|consen  164 ATIAKRKS---FIGTPYWMAPE  182 (829)
T ss_pred             hhhhhhhc---ccCCccccchh
Confidence            53222221   22344456666

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.87  E-value=1.3e-21  Score=157.80  Aligned_cols=137  Identities=23%  Similarity=0.298  Sum_probs=123.7

Q ss_pred             cceEEEEEEE--CCeEEEEEEeeccCCcc-hhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCCCCCHHHHHhh
Q 026214           74 WGCILYKGFW--QERLISVMRFRESNRDG-HGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILS  150 (241)
Q Consensus        74 ~~g~Vy~~~~--~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~  150 (241)
                      +||.||+|.+  ++..+++|.+....... ...+.+|+..+++++|+|++++++++......++++||+++++|.+++..
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~   80 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK   80 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence            4789999999  57999999998765444 67899999999999999999999999999999999999998899999965


Q ss_pred             cCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          151 ASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       151 ~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      .     ..+++..+..++.+++.++.+||   ..+++|+||+|+||+++.++.++++|||.+.....+
T Consensus        81 ~-----~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~  140 (244)
T smart00220       81 R-----GRLSEDEARFYARQILSALEYLH---SNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPG  140 (244)
T ss_pred             c-----cCCCHHHHHHHHHHHHHHHHHHH---HcCeecCCcCHHHeEECCCCcEEEccccceeeeccc
Confidence            4     22889999999999999999999   889999999999999999999999999999987665

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.87  E-value=2.3e-22  Score=176.22  Aligned_cols=159  Identities=19%  Similarity=0.219  Sum_probs=133.5

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhc-CCCceeeEeeEEecCCcceEEEe
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQM-SHDHILKLIGCCLETPIPILAFE  137 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e  137 (241)
                      +..|.....+|.|+|+.|-.+.+  ++...++|++.+..    ....+|+.++... +||||+++.+.+.+....|+|||
T Consensus       321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e  396 (612)
T KOG0603|consen  321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME  396 (612)
T ss_pred             chhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence            45677778899999999999988  88889999987762    2234567666666 89999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeE-cCCCcEEEccccCceecC
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILF-NEENVAKMFDFSLSISIP  216 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill-~~~~~~ki~DfG~a~~~~  216 (241)
                      .+.++-|.+.+...      +.....+..|+.+|+.|+.|||   +.++|||||||+|||+ +..++++|+|||.++..+
T Consensus       397 ~l~g~ell~ri~~~------~~~~~e~~~w~~~lv~Av~~LH---~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~  467 (612)
T KOG0603|consen  397 LLDGGELLRRIRSK------PEFCSEASQWAAELVSAVDYLH---EQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELE  467 (612)
T ss_pred             hccccHHHHHHHhc------chhHHHHHHHHHHHHHHHHHHH---hcCeeecCCChhheeecCCCCcEEEEEechhhhCc
Confidence            99998888888554      2223667789999999999999   9999999999999999 589999999999999887


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .+      +..+..+..|+|||
T Consensus       468 ~~------~~tp~~t~~y~APE  483 (612)
T KOG0603|consen  468 RS------CDTPALTLQYVAPE  483 (612)
T ss_pred             hh------hcccchhhcccChh
Confidence            76      55666777888887

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.87  E-value=1.6e-23  Score=179.21  Aligned_cols=162  Identities=15%  Similarity=0.161  Sum_probs=140.3

Q ss_pred             CcCCeeecccceEEEEEEECCeE--EEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeC
Q 026214           65 DQKNVITEDWGCILYKGFWQERL--ISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESV  139 (241)
Q Consensus        65 ~~~~~lg~G~~g~Vy~~~~~~~~--vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  139 (241)
                      ...--||-|+||.|=.+..++..  +|+|++++..   ....+....|-.+|..++.|.||+++..|.++...|++||-|
T Consensus       423 ~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaC  502 (732)
T KOG0614|consen  423 KRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEAC  502 (732)
T ss_pred             hhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHhh
Confidence            33456899999999999884433  7888877643   334456788999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCC
Q 026214          140 EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGG  219 (241)
Q Consensus       140 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~  219 (241)
                      -||.|...+...     +.++..+...++.+++.|+.|||   +.+||.|||||+|.+++.+|-+|+.|||+|+.+..++
T Consensus       503 lGGElWTiLrdR-----g~Fdd~tarF~~acv~EAfeYLH---~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~  574 (732)
T KOG0614|consen  503 LGGELWTILRDR-----GSFDDYTARFYVACVLEAFEYLH---RKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGR  574 (732)
T ss_pred             cCchhhhhhhhc-----CCcccchhhhhHHHHHHHHHHHH---hcCceeccCChhheeeccCCceEEeehhhHHHhccCC
Confidence            999999999654     56899999999999999999999   9999999999999999999999999999999999998


Q ss_pred             ccccceeecCCceeeeecC
Q 026214          220 TSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~e  238 (241)
                      .+++.|.    |+-|.|||
T Consensus       575 KTwTFcG----TpEYVAPE  589 (732)
T KOG0614|consen  575 KTWTFCG----TPEYVAPE  589 (732)
T ss_pred             ceeeecC----Ccccccch
Confidence            8887664    44567777

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.86  E-value=3.6e-22  Score=162.37  Aligned_cols=145  Identities=20%  Similarity=0.270  Sum_probs=126.7

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeecc--CCcchhhHHHHHHHHHhcCCCceeeEeeEEecCC------c
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRES--NRDGHGSCINNIVYAAQMSHDHILKLIGCCLETP------I  131 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~  131 (241)
                      ..|.....+|.|.- .|..+.+  .+++||+|++...  .....++..+|..++..++|+||++++.++....      .
T Consensus        17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e   95 (369)
T KOG0665|consen   17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE   95 (369)
T ss_pred             eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence            45677788899988 7888888  8999999987542  3455678899999999999999999999997654      5


Q ss_pred             ceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccC
Q 026214          132 PILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL  211 (241)
Q Consensus       132 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~  211 (241)
                      .|+|||+|. .+|...+...       ++..++..+++|+++|+.|||   +.+|+||||||+||++..++.+||.|||+
T Consensus        96 ~y~v~e~m~-~nl~~vi~~e-------lDH~tis~i~yq~~~~ik~lh---s~~IihRdLkPsnivv~~~~~lKi~dfg~  164 (369)
T KOG0665|consen   96 VYLVMELMD-ANLCQVILME-------LDHETISYILYQMLCGIKHLH---SAGIIHRDLKPSNIVVNSDCTLKILDFGL  164 (369)
T ss_pred             HHHHHHhhh-hHHHHHHHHh-------cchHHHHHHHHHHHHHHHHHH---hcceeecccCcccceecchhheeeccchh
Confidence            799999997 6999999644       788899999999999999999   99999999999999999999999999999


Q ss_pred             ceecCCC
Q 026214          212 SISIPEG  218 (241)
Q Consensus       212 a~~~~~~  218 (241)
                      |+.-..+
T Consensus       165 ar~e~~~  171 (369)
T KOG0665|consen  165 ARTEDTD  171 (369)
T ss_pred             hcccCcc
Confidence            9976665

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.86  E-value=9e-21  Score=151.40  Aligned_cols=136  Identities=15%  Similarity=0.144  Sum_probs=115.2

Q ss_pred             CeeecccceEEEEEEECCeEEEEEEeeccCCc--------chhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeC
Q 026214           68 NVITEDWGCILYKGFWQERLISVMRFRESNRD--------GHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESV  139 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  139 (241)
                      +.||+|++|.||+|.+.+..+++|........        ....+.+|+.++..+.|++++....++...+..+++|||+
T Consensus         2 ~~l~~G~~~~vy~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~   81 (211)
T PRK14879          2 KLIKRGAEAEIYLGDFLGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEYI   81 (211)
T ss_pred             cccccCceEEEEEEeeCCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEEe
Confidence            57899999999999998889999986543211        1235788999999999999887777777778899999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          140 EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       140 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      +|++|.+++...        .+ ....++.+++.+|.++|   ..+++|+|++|.|||++ ++.++|+|||.+....
T Consensus        82 ~G~~L~~~~~~~--------~~-~~~~i~~~i~~~l~~lH---~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~~~  145 (211)
T PRK14879         82 EGEPLKDLINSN--------GM-EELELSREIGRLVGKLH---SAGIIHGDLTTSNMILS-GGKIYLIDFGLAEFSK  145 (211)
T ss_pred             CCcCHHHHHHhc--------cH-HHHHHHHHHHHHHHHHH---hCCcccCCCCcccEEEE-CCCEEEEECCcccCCC
Confidence            999999998443        12 77889999999999999   99999999999999999 7889999999998643

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.85  E-value=4.6e-21  Score=150.85  Aligned_cols=150  Identities=17%  Similarity=0.158  Sum_probs=128.6

Q ss_pred             HHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCC-CceeeEeeEEecCCcceEE
Q 026214           59 LATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSH-DHILKLIGCCLETPIPILA  135 (241)
Q Consensus        59 ~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv  135 (241)
                      ...++|...++||+|+||.+|.|..  +|..||||.-....  ...++..|..+...|++ ..|+.+..+..+...-.||
T Consensus        12 iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a--~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlV   89 (341)
T KOG1163|consen   12 IVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA--KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLV   89 (341)
T ss_pred             eeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC--CCcchhHHHHHHHHhccCCCCchhhhhccccccceee
Confidence            3457788999999999999999998  89999999865432  44668889999999965 7888888888888899999


Q ss_pred             EeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcC---CCcEEEccccCc
Q 026214          136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNE---ENVAKMFDFSLS  212 (241)
Q Consensus       136 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~---~~~~ki~DfG~a  212 (241)
                      |+++ |.||.+++.-.    ...++..+++.++.|++.-++|+|   ..++|||||||+|+|..-   ...+.++|||+|
T Consensus        90 MdLL-GPsLEdLfnfC----~R~ftmkTvLMLaDQml~RiEyvH---~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLa  161 (341)
T KOG1163|consen   90 MDLL-GPSLEDLFNFC----SRRFTMKTVLMLADQMLSRIEYVH---LRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLA  161 (341)
T ss_pred             eecc-CccHHHHHHHH----hhhhhHHhHHHHHHHHHHHHHHHH---hhccccccCCccceeeccccccceEEEEeccch
Confidence            9988 58999999766    345888899999999999999999   999999999999999953   356999999999


Q ss_pred             eecCCC
Q 026214          213 ISIPEG  218 (241)
Q Consensus       213 ~~~~~~  218 (241)
                      +.+-..
T Consensus       162 Kky~d~  167 (341)
T KOG1163|consen  162 KKYRDI  167 (341)
T ss_pred             hhhccc
Confidence            988543

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.85  E-value=6.8e-21  Score=155.98  Aligned_cols=152  Identities=17%  Similarity=0.205  Sum_probs=131.5

Q ss_pred             HHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhc-CCCceeeEeeEEecCCcceEE
Q 026214           59 LATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQM-SHDHILKLIGCCLETPIPILA  135 (241)
Q Consensus        59 ~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv  135 (241)
                      ...-+|..+++||+|+||.++.|+.  ++.+||||.-+...  ...++..|.+..+.| ..++|...+-+...+.+-.||
T Consensus        25 ~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLV  102 (449)
T KOG1165|consen   25 MVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILV  102 (449)
T ss_pred             EecccceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhh
Confidence            3446799999999999999999998  99999999765443  567788899999988 579999999888888889999


Q ss_pred             EeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCC-----CcEEEcccc
Q 026214          136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEE-----NVAKMFDFS  210 (241)
Q Consensus       136 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~-----~~~ki~DfG  210 (241)
                      +|++ |.||+|+..-+    ...++..++..++.|++.-+.|+|   +..+|.|||||+|+||...     ..+.|+|||
T Consensus       103 idLL-GPSLEDLFD~C----gR~FSvKTV~miA~Qmi~rie~vH---~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFG  174 (449)
T KOG1165|consen  103 IDLL-GPSLEDLFDLC----GRRFSVKTVAMIAKQMITRIEYVH---EKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFG  174 (449)
T ss_pred             hhhh-CcCHHHHHHHh----cCcccHHhHHHHHHHHHHHHHHHH---hcceeecccCccceeecCCCCCCCceEEEEecc
Confidence            9988 58999998665    445899999999999999999999   9999999999999999643     459999999


Q ss_pred             CceecCCCCc
Q 026214          211 LSISIPEGGT  220 (241)
Q Consensus       211 ~a~~~~~~~~  220 (241)
                      +|+.+..+.+
T Consensus       175 mAK~YrDp~T  184 (449)
T KOG1165|consen  175 MAKEYRDPKT  184 (449)
T ss_pred             chhhhcCccc
Confidence            9999976654

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.85  E-value=8.5e-22  Score=157.32  Aligned_cols=147  Identities=16%  Similarity=0.240  Sum_probs=123.8

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhc-CCCceeeEeeE-EecCCcceEEEe
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQM-SHDHILKLIGC-CLETPIPILAFE  137 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~-~~~~~~~~lv~e  137 (241)
                      +.|.+.+.||+|.||.+-.+.+  +...+++|.++..- .....|.+|...--.| .|.||+.-+++ |+..+...+++|
T Consensus        24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE  102 (378)
T KOG1345|consen   24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQE  102 (378)
T ss_pred             hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeec
Confidence            5588889999999999999999  77889999887653 4567899998876666 68999877654 456677888999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEc--CCCcEEEccccCceec
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFN--EENVAKMFDFSLSISI  215 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~--~~~~~ki~DfG~a~~~  215 (241)
                      |++.|+|.+-+.      ...+.+.....++.|+++||.|||   +.++||||||.+||||-  +...+|+||||+.+..
T Consensus       103 ~aP~gdL~snv~------~~GigE~~~K~v~~ql~SAi~fMH---sknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~  173 (378)
T KOG1345|consen  103 FAPRGDLRSNVE------AAGIGEANTKKVFAQLLSAIEFMH---SKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKV  173 (378)
T ss_pred             cCccchhhhhcC------cccccHHHHHHHHHHHHHHHHHhh---ccchhhcccccceEEEecCCccEEEeeeccccccc
Confidence            999999998883      445888889999999999999999   99999999999999994  3457999999999876


Q ss_pred             CCC
Q 026214          216 PEG  218 (241)
Q Consensus       216 ~~~  218 (241)
                      +.-
T Consensus       174 g~t  176 (378)
T KOG1345|consen  174 GTT  176 (378)
T ss_pred             Cce
Confidence            543

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.85  E-value=1.7e-21  Score=159.83  Aligned_cols=168  Identities=20%  Similarity=0.260  Sum_probs=140.7

Q ss_pred             HHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeecc---CCcchhhHHHHHHHHHhc-CCCceeeEeeEEecCCcc
Q 026214           59 LATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRES---NRDGHGSCINNIVYAAQM-SHDHILKLIGCCLETPIP  132 (241)
Q Consensus        59 ~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~  132 (241)
                      ...+.|+...+||.|+|+.|..+.+  +.+.+|+|++++.   ...+......|-.+.... +||.+|-+..+|.....+
T Consensus       247 l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrl  326 (593)
T KOG0695|consen  247 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRL  326 (593)
T ss_pred             cccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceE
Confidence            3447788999999999999999998  8899999998763   223445566777777777 899999999999999999


Q ss_pred             eEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCc
Q 026214          133 ILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS  212 (241)
Q Consensus       133 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a  212 (241)
                      ++|.||++||+|.-.+..+     ..+++..+..+...|+-||.|||   +.+|+.||||.+|+|+|..|++|++|+|.+
T Consensus       327 ffvieyv~ggdlmfhmqrq-----rklpeeharfys~ei~lal~flh---~rgiiyrdlkldnvlldaeghikltdygmc  398 (593)
T KOG0695|consen  327 FFVIEYVNGGDLMFHMQRQ-----RKLPEEHARFYSAEICLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMC  398 (593)
T ss_pred             EEEEEEecCcceeeehhhh-----hcCcHHHhhhhhHHHHHHHHHHh---hcCeeeeeccccceEEccCCceeecccchh
Confidence            9999999999998877554     45999999999999999999999   999999999999999999999999999999


Q ss_pred             eec-CCCCccccceeecCCceeeeecC
Q 026214          213 ISI-PEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       213 ~~~-~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +.- .++.++.+.|    +++.|.|||
T Consensus       399 ke~l~~gd~tstfc----gtpnyiape  421 (593)
T KOG0695|consen  399 KEGLGPGDTTSTFC----GTPNYIAPE  421 (593)
T ss_pred             hcCCCCCccccccc----CCCcccchh
Confidence            854 4444444433    455677887

>smart00090 RIO RIO-like kinase

Probab=99.85  E-value=1.1e-20  Score=153.56  Aligned_cols=148  Identities=14%  Similarity=0.098  Sum_probs=114.4

Q ss_pred             HHhcCCCcCCeeecccceEEEEEE-E--CCeEEEEEEeeccCCc-------------------c-----hhhHHHHHHHH
Q 026214           59 LATNNYDQKNVITEDWGCILYKGF-W--QERLISVMRFRESNRD-------------------G-----HGSCINNIVYA  111 (241)
Q Consensus        59 ~~~~~~~~~~~lg~G~~g~Vy~~~-~--~~~~vavK~~~~~~~~-------------------~-----~~~~~~E~~~l  111 (241)
                      .....|...+.||+|++|.||+|. +  ++..||+|.+......                   .     ...+.+|+.++
T Consensus        25 ~~~~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L  104 (237)
T smart00090       25 NRGILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNL  104 (237)
T ss_pred             hcCchHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHH
Confidence            333457788999999999999998 3  8999999998754211                   0     02256799999


Q ss_pred             HhcCCCc--eeeEeeEEecCCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCC-eEE
Q 026214          112 AQMSHDH--ILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRP-IVY  188 (241)
Q Consensus       112 ~~l~h~n--iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~-ivH  188 (241)
                      .++.+.+  +++++++    ...++||||+++.+|......     ...+.......++.|++.+|.+||   ..+ ++|
T Consensus       105 ~~L~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~-----~~~~~~~~~~~i~~qi~~~l~~LH---~~g~iiH  172 (237)
T smart00090      105 QRLYEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLK-----DVEPEEEEEFELYDDILEEMRKLY---KEGELVH  172 (237)
T ss_pred             HHHHhcCCCCCeeeEe----cCceEEEEEecCCcccccccc-----cCCcchHHHHHHHHHHHHHHHHHH---hcCCEEe
Confidence            9997533  4444443    235899999998887765422     223555667889999999999999   889 999


Q ss_pred             ccCCCCCeeEcCCCcEEEccccCceecCCCC
Q 026214          189 RDFKTAHILFNEENVAKMFDFSLSISIPEGG  219 (241)
Q Consensus       189 ~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~  219 (241)
                      +||||+||+++ ++.++|+|||.|...+.+.
T Consensus       173 ~Dikp~NIli~-~~~i~LiDFg~a~~~~~~~  202 (237)
T smart00090      173 GDLSEYNILVH-DGKVVIIDVSQSVELDHPM  202 (237)
T ss_pred             CCCChhhEEEE-CCCEEEEEChhhhccCCcc
Confidence            99999999999 8899999999999877665

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.85  E-value=7.6e-21  Score=152.32  Aligned_cols=142  Identities=14%  Similarity=0.064  Sum_probs=117.0

Q ss_pred             HhcCCCcCCeeecccceEEEEEEECCeEEEEEEeeccCCcchhh---------HHHHHHHHHhcCCCceeeEeeEEecC-
Q 026214           60 ATNNYDQKNVITEDWGCILYKGFWQERLISVMRFRESNRDGHGS---------CINNIVYAAQMSHDHILKLIGCCLET-  129 (241)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~---------~~~E~~~l~~l~h~niv~l~~~~~~~-  129 (241)
                      ..++|...+++|.|+||.||....++..+|+|.+.+........         +.+|+..+.++.||+|..+.+++... 
T Consensus        29 l~~~y~~~~~l~~~~f~~v~l~~~~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~  108 (232)
T PRK10359         29 LSYNIKTIKVFRNIDDTKVSLIDTDYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAE  108 (232)
T ss_pred             hhCceEEEEEecCCCceEEEEEecCCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecc
Confidence            45789999999999999999977677789999997654333222         57899999999999999998886533 


Q ss_pred             -------CcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCC
Q 026214          130 -------PIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEEN  202 (241)
Q Consensus       130 -------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~  202 (241)
                             +..+++|||++|.+|.++..         ++.    ....+++.+|..+|   ..+++|+|++|+||+++.++
T Consensus       109 ~~~~~~~~~~~lvmEyi~G~tL~~~~~---------~~~----~~~~~i~~~l~~lH---~~gi~H~Dikp~Nili~~~g  172 (232)
T PRK10359        109 RKTLRYAHTYIMLIEYIEGVELNDMPE---------ISE----DVKAKIKASIESLH---QHGMVSGDPHKGNFIVSKNG  172 (232)
T ss_pred             cccccccCCeEEEEEEECCccHHHhhh---------ccH----HHHHHHHHHHHHHH---HcCCccCCCChHHEEEeCCC
Confidence                   35789999999999988741         222    24569999999999   99999999999999999988


Q ss_pred             cEEEccccCceecCCC
Q 026214          203 VAKMFDFSLSISIPEG  218 (241)
Q Consensus       203 ~~ki~DfG~a~~~~~~  218 (241)
                       ++++|||.......+
T Consensus       173 -i~liDfg~~~~~~e~  187 (232)
T PRK10359        173 -LRIIDLSGKRCTAQR  187 (232)
T ss_pred             -EEEEECCCcccccch
Confidence             999999998876544

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.85  E-value=6e-21  Score=158.45  Aligned_cols=164  Identities=14%  Similarity=0.150  Sum_probs=136.3

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcC-C-Cc----eeeEeeEEecCCcc
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMS-H-DH----ILKLIGCCLETPIP  132 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-~n----iv~l~~~~~~~~~~  132 (241)
                      ++.|.+...+|+|.||.|-.+.+  ++..||+|+++... .-.++.+-|+.++.++. + |+    ++++.++|...+..
T Consensus        88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~-kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghi  166 (415)
T KOG0671|consen   88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD-KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHI  166 (415)
T ss_pred             ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH-HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCce
Confidence            67788899999999999999999  77889999987664 34466788999999993 2 32    78888999999999


Q ss_pred             eEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcC------------
Q 026214          133 ILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNE------------  200 (241)
Q Consensus       133 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~------------  200 (241)
                      ++|+|.+ |-|+.+++..+   ...+++-..+..++.|++.++.|||   ++.++|-||||+|||+..            
T Consensus       167 Civfell-G~S~~dFlk~N---~y~~fpi~~ir~m~~QL~~sv~fLh---~~kl~HTDLKPENILfvss~~~~~~~~k~~  239 (415)
T KOG0671|consen  167 CIVFELL-GLSTFDFLKEN---NYIPFPIDHIRHMGYQLLESVAFLH---DLKLTHTDLKPENILFVSSEYFKTYNPKKK  239 (415)
T ss_pred             EEEEecc-ChhHHHHhccC---CccccchHHHHHHHHHHHHHHHHHH---hcceeecCCChheEEEeccceEEEeccCCc
Confidence            9999988 46999999876   5677899999999999999999999   999999999999999932            


Q ss_pred             --------CCcEEEccccCceecCCCCccccceeecCCce
Q 026214          201 --------ENVAKMFDFSLSISIPEGGTSGAKCLKSERTE  232 (241)
Q Consensus       201 --------~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~  232 (241)
                              +..++|+|||.|+.-...-++...+..+.+++
T Consensus       240 ~~~~r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPE  279 (415)
T KOG0671|consen  240 VCFIRPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPE  279 (415)
T ss_pred             cceeccCCCcceEEEecCCcceeccCcceeeeccccCCch
Confidence                    23489999999998777665554444444444

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.84  E-value=2.4e-20  Score=147.66  Aligned_cols=133  Identities=17%  Similarity=0.178  Sum_probs=109.5

Q ss_pred             eeecccceEEEEEEECCeEEEEEEeeccCCc--------chhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCC
Q 026214           69 VITEDWGCILYKGFWQERLISVMRFRESNRD--------GHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVE  140 (241)
Q Consensus        69 ~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~  140 (241)
                      .||+|++|.||++.+++..|++|........        ...++.+|+.++..+.|+++.....++...+..+++|||++
T Consensus         1 ~ig~G~~~~vy~~~~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~   80 (199)
T TIGR03724         1 LIAKGAEAIIYLGDFLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIE   80 (199)
T ss_pred             CCCCCceEEEEEeecCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEC
Confidence            4799999999999998899999986543211        12457789999999998876655555666677899999999


Q ss_pred             CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCC
Q 026214          141 YGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE  217 (241)
Q Consensus       141 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~  217 (241)
                      |++|.+++...     . .      .++.+++.+|.+||   +.+++|+|++|.||+++ ++.++++|||++.....
T Consensus        81 g~~l~~~~~~~-----~-~------~~~~~i~~~l~~lH---~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~~~  141 (199)
T TIGR03724        81 GKPLKDVIEEG-----N-D------ELLREIGRLVGKLH---KAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKYSDE  141 (199)
T ss_pred             CccHHHHHhhc-----H-H------HHHHHHHHHHHHHH---HCCeecCCCCcceEEEE-CCcEEEEECCCCcCCCc
Confidence            99999988432     0 0      78999999999999   99999999999999999 88999999999987543

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.84  E-value=5.6e-20  Score=144.71  Aligned_cols=136  Identities=14%  Similarity=0.014  Sum_probs=109.5

Q ss_pred             CcCCeeecccceEEEEEEECCeEEEEEEeeccCCcc----hhhHHHHHHHHHhcC-CCceeeEeeEEecCCcceEEEeeC
Q 026214           65 DQKNVITEDWGCILYKGFWQERLISVMRFRESNRDG----HGSCINNIVYAAQMS-HDHILKLIGCCLETPIPILAFESV  139 (241)
Q Consensus        65 ~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~----~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~  139 (241)
                      .....|++|+||+||.+...+.+++.+.+.......    ...+.+|+.+|++|. |+++++++++    +..+++|||+
T Consensus         5 ~~~~~l~~~~f~~v~~~~~~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI   80 (218)
T PRK12274          5 AVNEPLKSDTFGRILLVRGGERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYL   80 (218)
T ss_pred             ccceeecCCCcceEEEeecCCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeee
Confidence            446789999999999887788889988887664311    124789999999994 5889999876    3468999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccC-CCCCeeEcCCCcEEEccccCceecCCC
Q 026214          140 EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDF-KTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       140 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dl-k~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      .|.+|.+.+..           . ...++.|++.+|.++|   ..+|+|||| ||.|||++.++.++|+|||+|......
T Consensus        81 ~G~~L~~~~~~-----------~-~~~~~~qi~~~L~~lH---~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~  145 (218)
T PRK12274         81 AGAAMYQRPPR-----------G-DLAYFRAARRLLQQLH---RCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPR  145 (218)
T ss_pred             cCccHHhhhhh-----------h-hHHHHHHHHHHHHHHH---HCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCc
Confidence            98888754411           1 1357789999999999   999999999 799999999999999999999866544


Q ss_pred             C
Q 026214          219 G  219 (241)
Q Consensus       219 ~  219 (241)
                      .
T Consensus       146 ~  146 (218)
T PRK12274        146 A  146 (218)
T ss_pred             c
Confidence            3

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.83  E-value=5.3e-20  Score=166.31  Aligned_cols=139  Identities=12%  Similarity=0.095  Sum_probs=114.4

Q ss_pred             cCCCcCCeeecccceEEEEEEECCeEEEEEEeeccC--C------cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcce
Q 026214           62 NNYDQKNVITEDWGCILYKGFWQERLISVMRFRESN--R------DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPI  133 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~--~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  133 (241)
                      ..|...+.||+|+||.||++.+.+..+++|+.....  .      .....+.+|+.++..++|++++.+..++......+
T Consensus       333 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~  412 (535)
T PRK09605        333 RRKIPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKT  412 (535)
T ss_pred             cccCccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCE
Confidence            445667899999999999999866566555432211  0      11245889999999999999998888887777889


Q ss_pred             EEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCce
Q 026214          134 LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSI  213 (241)
Q Consensus       134 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~  213 (241)
                      ++|||+++++|.+++.             ....++.+++.+|.+||   +.+++|||+||+|||+ .++.++|+|||+++
T Consensus       413 lv~E~~~g~~L~~~l~-------------~~~~~~~~i~~~L~~lH---~~giiHrDlkp~NILl-~~~~~~liDFGla~  475 (535)
T PRK09605        413 IVMEYIGGKDLKDVLE-------------GNPELVRKVGEIVAKLH---KAGIVHGDLTTSNFIV-RDDRLYLIDFGLGK  475 (535)
T ss_pred             EEEEecCCCcHHHHHH-------------HHHHHHHHHHHHHHHHH---hCCCccCCCChHHEEE-ECCcEEEEeCcccc
Confidence            9999999999999883             34578999999999999   9999999999999999 67889999999998


Q ss_pred             ecCC
Q 026214          214 SIPE  217 (241)
Q Consensus       214 ~~~~  217 (241)
                      ....
T Consensus       476 ~~~~  479 (535)
T PRK09605        476 YSDL  479 (535)
T ss_pred             cCCc
Confidence            7654

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.83  E-value=1.1e-19  Score=144.06  Aligned_cols=147  Identities=11%  Similarity=0.055  Sum_probs=114.0

Q ss_pred             HHHHHHhcCCCcCCeeecccceEEEEEEE-CCeEEEEEEeeccCCc----------------------chhhHHHHHHHH
Q 026214           55 QELKLATNNYDQKNVITEDWGCILYKGFW-QERLISVMRFRESNRD----------------------GHGSCINNIVYA  111 (241)
Q Consensus        55 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~----------------------~~~~~~~E~~~l  111 (241)
                      .++......|...+.||+|+||.||++.. +++.||||++......                      ....+..|+.++
T Consensus         8 ~~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l   87 (198)
T cd05144           8 HTLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAAL   87 (198)
T ss_pred             HHHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHH
Confidence            34455555577889999999999999998 8999999987653210                      011356788899


Q ss_pred             HhcCCCc--eeeEeeEEecCCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEc
Q 026214          112 AQMSHDH--ILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYR  189 (241)
Q Consensus       112 ~~l~h~n--iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~  189 (241)
                      ..+.|++  ++..++    ....+++|||+++++|......           .....++.+++.++.++|   ..+++|+
T Consensus        88 ~~l~~~~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~-----------~~~~~~~~~i~~~l~~lh---~~gi~H~  149 (198)
T cd05144          88 KALYEEGFPVPKPID----WNRHAVVMEYIDGVELYRVRVL-----------EDPEEVLDEILEEIVKAY---KHGIIHG  149 (198)
T ss_pred             HHHHHcCCCCCceee----cCCceEEEEEeCCcchhhcccc-----------ccHHHHHHHHHHHHHHHH---HCCCCcC
Confidence            9998774  444443    2456899999999888765410           234578899999999999   8999999


Q ss_pred             cCCCCCeeEcCCCcEEEccccCceecCCCC
Q 026214          190 DFKTAHILFNEENVAKMFDFSLSISIPEGG  219 (241)
Q Consensus       190 dlk~~Nill~~~~~~ki~DfG~a~~~~~~~  219 (241)
                      ||+|+||+++.++.++|+|||.+.....+.
T Consensus       150 Dl~p~Nill~~~~~~~liDfg~~~~~~~~~  179 (198)
T cd05144         150 DLSEFNILVDDDEKIYIIDWPQMVSTDHPN  179 (198)
T ss_pred             CCCcccEEEcCCCcEEEEECCccccCCCcc
Confidence            999999999999999999999998776543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.81  E-value=3.7e-19  Score=151.24  Aligned_cols=145  Identities=17%  Similarity=0.143  Sum_probs=122.9

Q ss_pred             CCCcCCeeecccceEEEEEEE-C--CeEEEEEEeeccCCcchhhHHHHHHHHHhcCC----CceeeEeeEE-ecCCcceE
Q 026214           63 NYDQKNVITEDWGCILYKGFW-Q--ERLISVMRFRESNRDGHGSCINNIVYAAQMSH----DHILKLIGCC-LETPIPIL  134 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~-~--~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~-~~~~~~~l  134 (241)
                      .|...++||+|+||.||.+.+ .  ...+|+|............+..|+.++..+..    +++..+++.. ......++
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i   98 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI   98 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence            799999999999999999998 3  24688888766543333378889999988863    6899999988 57778999


Q ss_pred             EEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCC-----CcEEEccc
Q 026214          135 AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEE-----NVAKMFDF  209 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~-----~~~ki~Df  209 (241)
                      ||+.+ |.+|.++....   ....++..+.+.++.|++.+|.+||   +.+++||||||+|+++...     ..+.+.||
T Consensus        99 VM~l~-G~sL~dl~~~~---~~~~fs~~T~l~ia~q~l~~l~~lH---~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDf  171 (322)
T KOG1164|consen   99 VMSLL-GPSLEDLRKRN---PPGRFSRKTVLRIAIQNLNALEDLH---SKGFIHRDIKPENFVVGQSSRSEVRTLYLLDF  171 (322)
T ss_pred             EEecc-CccHHHHHHhC---CCCCcCHhHHHHHHHHHHHHHHHHH---hcCcccCCcCHHHeeecCCCCcccceEEEEec
Confidence            99987 58999988665   2467999999999999999999999   9999999999999999754     46999999


Q ss_pred             cCcee
Q 026214          210 SLSIS  214 (241)
Q Consensus       210 G~a~~  214 (241)
                      |+|+.
T Consensus       172 Glar~  176 (322)
T KOG1164|consen  172 GLARR  176 (322)
T ss_pred             CCCcc
Confidence            99993

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.79  E-value=1.8e-19  Score=151.35  Aligned_cols=145  Identities=24%  Similarity=0.321  Sum_probs=127.4

Q ss_pred             HHHhcCCCcCCeeecccceEEEEEEE-C----CeEEEEEEeeccCCcchhhHHHHHHHHHhc-CCCceeeEeeEEecCCc
Q 026214           58 KLATNNYDQKNVITEDWGCILYKGFW-Q----ERLISVMRFRESNRDGHGSCINNIVYAAQM-SHDHILKLIGCCLETPI  131 (241)
Q Consensus        58 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~  131 (241)
                      ....+.|...++||+|+|++||++++ +    .+.||+|.+....  ......+|+++|..+ -+.||+++.+++...+.
T Consensus        32 p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~  109 (418)
T KOG1167|consen   32 PFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQ  109 (418)
T ss_pred             hhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhccCCe
Confidence            33446688899999999999999998 3    5789999987654  456789999999999 69999999999999999


Q ss_pred             ceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcC-CCcEEEcccc
Q 026214          132 PILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNE-ENVAKMFDFS  210 (241)
Q Consensus       132 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~-~~~~ki~DfG  210 (241)
                      ..+|+||+++.+..++...        ++...+..+++.++.||.++|   .+||||||+||+|+|.+. .+.-.|.|||
T Consensus       110 v~ivlp~~~H~~f~~l~~~--------l~~~~i~~Yl~~ll~Al~~~h---~~GIvHRDiKpsNFL~n~~t~rg~LvDFg  178 (418)
T KOG1167|consen  110 VAIVLPYFEHDRFRDLYRS--------LSLAEIRWYLRNLLKALAHLH---KNGIVHRDIKPSNFLYNRRTQRGVLVDFG  178 (418)
T ss_pred             eEEEecccCccCHHHHHhc--------CCHHHHHHHHHHHHHHhhhhh---ccCccccCCCccccccccccCCceEEech
Confidence            9999999999888888833        668889999999999999999   999999999999999975 5778899999


Q ss_pred             Cceec
Q 026214          211 LSISI  215 (241)
Q Consensus       211 ~a~~~  215 (241)
                      +|..+
T Consensus       179 LA~~~  183 (418)
T KOG1167|consen  179 LAQRY  183 (418)
T ss_pred             hHHHH
Confidence            99854

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.78  E-value=8.9e-19  Score=149.61  Aligned_cols=133  Identities=15%  Similarity=0.211  Sum_probs=113.3

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcC-----CC---ceeeEeeEEecC--
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMS-----HD---HILKLIGCCLET--  129 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h~---niv~l~~~~~~~--  129 (241)
                      +.|...++||.|-|++||.|++  +.+.||+|+.+... .-.+..+.||.+|++++     |+   .||+|++.|...  
T Consensus        78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq-hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp  156 (590)
T KOG1290|consen   78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ-HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP  156 (590)
T ss_pred             ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh-HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence            5677889999999999999999  67889999987653 34567899999999983     32   599999999654  


Q ss_pred             --CcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCC
Q 026214          130 --PIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEE  201 (241)
Q Consensus       130 --~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~  201 (241)
                        .+.+||+|++ |.+|..+|...   ....++...+..|+.||+.||.|||.  ..+|||-||||+|||+..+
T Consensus       157 NG~HVCMVfEvL-GdnLLklI~~s---~YrGlpl~~VK~I~~qvL~GLdYLH~--ecgIIHTDlKPENvLl~~~  224 (590)
T KOG1290|consen  157 NGQHVCMVFEVL-GDNLLKLIKYS---NYRGLPLSCVKEICRQVLTGLDYLHR--ECGIIHTDLKPENVLLCST  224 (590)
T ss_pred             CCcEEEEEehhh-hhHHHHHHHHh---CCCCCcHHHHHHHHHHHHHHHHHHHH--hcCccccCCCcceeeeecc
Confidence              4789999999 46999999876   46679999999999999999999997  5699999999999999554

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.78  E-value=4.8e-18  Score=138.34  Aligned_cols=137  Identities=14%  Similarity=0.090  Sum_probs=108.2

Q ss_pred             CCeee-cccceEEEEEEECCeEEEEEEeeccC-------------CcchhhHHHHHHHHHhcCCCce--eeEeeEEecCC
Q 026214           67 KNVIT-EDWGCILYKGFWQERLISVMRFRESN-------------RDGHGSCINNIVYAAQMSHDHI--LKLIGCCLETP  130 (241)
Q Consensus        67 ~~~lg-~G~~g~Vy~~~~~~~~vavK~~~~~~-------------~~~~~~~~~E~~~l~~l~h~ni--v~l~~~~~~~~  130 (241)
                      ...|| .|+.|+||.+...+..+++|++....             ......+.+|+.++..|.|++|  +.++++.....
T Consensus        36 ~~~lg~~~g~gtv~~v~~~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~  115 (239)
T PRK01723         36 ARVVGSAKGRGTTWFVQTPGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH  115 (239)
T ss_pred             CceeecCCCCccEEEEEeCCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence            45787 89999999999988899999885421             1123567889999999998875  66776654322


Q ss_pred             ----cceEEEeeCCC-CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEE
Q 026214          131 ----IPILAFESVEY-GNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAK  205 (241)
Q Consensus       131 ----~~~lv~e~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~k  205 (241)
                          ..++|||++++ .+|.+++...      .++..    .+.+++.+|.+||   ..+|+|+||||.|||++.++.++
T Consensus       116 ~~~~~~~lV~e~l~G~~~L~~~l~~~------~l~~~----~~~~i~~~l~~lH---~~GI~HrDlkp~NILv~~~~~v~  182 (239)
T PRK01723        116 GLFYRADILIERIEGARDLVALLQEA------PLSEE----QWQAIGQLIARFH---DAGVYHADLNAHNILLDPDGKFW  182 (239)
T ss_pred             CcceeeeEEEEecCCCCCHHHHHhcC------CCCHH----HHHHHHHHHHHHH---HCCCCCCCCCchhEEEcCCCCEE
Confidence                23599999997 6899888432      34443    3678999999999   99999999999999999888999


Q ss_pred             EccccCceecC
Q 026214          206 MFDFSLSISIP  216 (241)
Q Consensus       206 i~DfG~a~~~~  216 (241)
                      |+|||.+....
T Consensus       183 LIDfg~~~~~~  193 (239)
T PRK01723        183 LIDFDRGELRT  193 (239)
T ss_pred             EEECCCcccCC
Confidence            99999998765

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.77  E-value=1.3e-17  Score=138.83  Aligned_cols=169  Identities=25%  Similarity=0.317  Sum_probs=139.1

Q ss_pred             CCcCCeeecccceEEEEEEECCeEEEEEEeeccCCc---chhhHHHHHHHHHhcCCC-ceeeEeeEEecCCcceEEEeeC
Q 026214           64 YDQKNVITEDWGCILYKGFWQERLISVMRFRESNRD---GHGSCINNIVYAAQMSHD-HILKLIGCCLETPIPILAFESV  139 (241)
Q Consensus        64 ~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~-niv~l~~~~~~~~~~~lv~e~~  139 (241)
                      |.....||.|+||.||.+.+. ..+++|.+......   ....+.+|+.++..+.|+ +++++.+++......+++++++
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~-~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~   80 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR-KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYV   80 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec-cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecC
Confidence            556678999999999999987 77899988765432   357799999999999888 7999999997777789999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCC-cEEEccccCceecCCC
Q 026214          140 EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEEN-VAKMFDFSLSISIPEG  218 (241)
Q Consensus       140 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~-~~ki~DfG~a~~~~~~  218 (241)
                      .++++.+++......  ..++......++.|++.++.|+|   ..+++|||+||+||+++... .++++|||++..+...
T Consensus        81 ~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~H---~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~  155 (384)
T COG0515          81 DGGSLEDLLKKIGRK--GPLSESEALFILAQILSALEYLH---SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDP  155 (384)
T ss_pred             CCCcHHHHHHhcccc--cCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCC
Confidence            999999777544110  36889999999999999999999   99999999999999999988 7999999999977665


Q ss_pred             Ccccc---ceeecCCceeeeecC
Q 026214          219 GTSGA---KCLKSERTEICCVRE  238 (241)
Q Consensus       219 ~~~~~---~~~~~~~~~~~~~~e  238 (241)
                      .....   ......++..|.+||
T Consensus       156 ~~~~~~~~~~~~~~~t~~~~~pe  178 (384)
T COG0515         156 GSTSSIPALPSTSVGTPGYMAPE  178 (384)
T ss_pred             CccccccccccccccccccCCHH
Confidence            44332   234555666778887

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.77  E-value=8.8e-18  Score=125.99  Aligned_cols=136  Identities=13%  Similarity=0.080  Sum_probs=113.2

Q ss_pred             CCeeecccceEEEEEEECCeEEEEEEeeccCCcchhhHHHHHHHHHhcCC--CceeeEeeEEecCCcceEEEeeCCCCCH
Q 026214           67 KNVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQMSH--DHILKLIGCCLETPIPILAFESVEYGNL  144 (241)
Q Consensus        67 ~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~~~gsL  144 (241)
                      .+.||.|.++.||++...+..+++|.......  ...+..|+.++..+.+  +++++++++....+..++++||++++++
T Consensus         3 ~~~i~~g~~~~v~~~~~~~~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~   80 (155)
T cd05120           3 IKLLKGGLTNRVYLLGTKDEDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETL   80 (155)
T ss_pred             ceecccccccceEEEEecCCeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeec
Confidence            46799999999999999778899998765432  4578899999999976  5899999888888889999999987655


Q ss_pred             HHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          145 RDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       145 ~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ..+            +......++.+++.++..+|.....+++|+|++|.||+++..+.++++|||.+...+
T Consensus        81 ~~~------------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~~  140 (155)
T cd05120          81 DEV------------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYGP  140 (155)
T ss_pred             ccC------------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCCC
Confidence            432            445667789999999999994333579999999999999998999999999987543

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.77  E-value=4.8e-18  Score=133.10  Aligned_cols=138  Identities=13%  Similarity=0.121  Sum_probs=99.6

Q ss_pred             CCeeecccceEEEEEEE-CCeEEEEEEeeccCCcc--hhh----------------------HHHHHHHHHhcCCCc--e
Q 026214           67 KNVITEDWGCILYKGFW-QERLISVMRFRESNRDG--HGS----------------------CINNIVYAAQMSHDH--I  119 (241)
Q Consensus        67 ~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~--~~~----------------------~~~E~~~l~~l~h~n--i  119 (241)
                      .+.||+|+||.||+|.+ ++..||||.+.......  ...                      ...|...+..+.+..  +
T Consensus         2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~   81 (187)
T cd05119           2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV   81 (187)
T ss_pred             CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence            46799999999999998 69999999987542111  111                      134566666664433  4


Q ss_pred             eeEeeEEecCCcceEEEeeCCCCCHHHH-HhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCC-CCeEEccCCCCCee
Q 026214          120 LKLIGCCLETPIPILAFESVEYGNLRDR-ILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFP-RPIVYRDFKTAHIL  197 (241)
Q Consensus       120 v~l~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~-~~ivH~dlk~~Nil  197 (241)
                      .+++++    ...+++|||++++++... +...      ... .....++.+++.++.++|   . .+++|+||+|+||+
T Consensus        82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~------~~~-~~~~~~~~~~~~~l~~lh---~~~~ivH~Dl~p~Nil  147 (187)
T cd05119          82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDV------RLL-EDPEELYDQILELMRKLY---REAGLVHGDLSEYNIL  147 (187)
T ss_pred             CceEec----CCCEEEEEEeCCCCccChhhhhh------hhc-ccHHHHHHHHHHHHHHHh---hccCcCcCCCChhhEE
Confidence            444433    246899999998543321 1111      011 556789999999999999   7 99999999999999


Q ss_pred             EcCCCcEEEccccCceecCCCC
Q 026214          198 FNEENVAKMFDFSLSISIPEGG  219 (241)
Q Consensus       198 l~~~~~~ki~DfG~a~~~~~~~  219 (241)
                      ++ ++.++++|||.+.....+.
T Consensus       148 i~-~~~~~liDfg~a~~~~~~~  168 (187)
T cd05119         148 VD-DGKVYIIDVPQAVEIDHPN  168 (187)
T ss_pred             EE-CCcEEEEECcccccccCcc
Confidence            99 8999999999998776543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.76  E-value=1.3e-18  Score=149.82  Aligned_cols=152  Identities=19%  Similarity=0.214  Sum_probs=127.4

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcC------CCceeeEeeEEecCCcce
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMS------HDHILKLIGCCLETPIPI  133 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~l~~~~~~~~~~~  133 (241)
                      ..|....-.|+|.|++|..|.+  .+..||||++.... .-.+.=+.|+++|.+|+      --|.++|+..|...++++
T Consensus       432 ~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE-~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLC  510 (752)
T KOG0670|consen  432 SRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE-VMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLC  510 (752)
T ss_pred             ceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch-HHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeE
Confidence            4455555679999999999999  67799999998653 23355578999999995      237899999999999999


Q ss_pred             EEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCC-CcEEEccccCc
Q 026214          134 LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEE-NVAKMFDFSLS  212 (241)
Q Consensus       134 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~-~~~ki~DfG~a  212 (241)
                      ||||-+. -+|.++|.+.+.  .-.|....+..++.|+..||..|-   ..+|+|.||||+|||+++. ..+||||||.|
T Consensus       511 lVFE~Ls-lNLRevLKKyG~--nvGL~ikaVRsYaqQLflALklLK---~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA  584 (752)
T KOG0670|consen  511 LVFEPLS-LNLREVLKKYGR--NVGLHIKAVRSYAQQLFLALKLLK---KCGVLHADIKPDNILVNESKNILKLCDFGSA  584 (752)
T ss_pred             EEehhhh-chHHHHHHHhCc--ccceeehHHHHHHHHHHHHHHHHH---hcCeeecccCccceEeccCcceeeeccCccc
Confidence            9999886 699999988744  344777888999999999999999   9999999999999999875 56999999999


Q ss_pred             eecCCCCc
Q 026214          213 ISIPEGGT  220 (241)
Q Consensus       213 ~~~~~~~~  220 (241)
                      ..+..++.
T Consensus       585 ~~~~enei  592 (752)
T KOG0670|consen  585 SFASENEI  592 (752)
T ss_pred             cccccccc
Confidence            88776653

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.71  E-value=1.6e-17  Score=154.64  Aligned_cols=149  Identities=16%  Similarity=0.181  Sum_probs=118.8

Q ss_pred             HHHHHhcCCCcCCeeecccceEEEEEEE-CCeEEEEEEeeccCCcchhhHHHHHHHHHhcC---CCceeeEeeEEecCCc
Q 026214           56 ELKLATNNYDQKNVITEDWGCILYKGFW-QERLISVMRFRESNRDGHGSCINNIVYAAQMS---HDHILKLIGCCLETPI  131 (241)
Q Consensus        56 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~  131 (241)
                      +...-...|.+.+.||+|+||.||+|.. +++.||+|.-++.....   |.-=..++.+|+   -+.|..+..++...+.
T Consensus       692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WE---fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~  768 (974)
T KOG1166|consen  692 EFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWE---FYICLQVMERLKPQMLPSIMHISSAHVFQNA  768 (974)
T ss_pred             eeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCcee---eeehHHHHHhhchhhhcchHHHHHHHccCCc
Confidence            4445556788889999999999999999 89999999877655332   222233344444   2345555666677888


Q ss_pred             ceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEc-------CCCcE
Q 026214          132 PILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFN-------EENVA  204 (241)
Q Consensus       132 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~-------~~~~~  204 (241)
                      .+||+||.+.|||.+++.     ....++|..++.++.|++.-+..||   ..+|||+||||+|+||.       ++..+
T Consensus       769 S~lv~ey~~~Gtlld~~N-----~~~~m~e~lv~~~~~qml~ive~lH---~~~IIHgDiKPDNfll~~~~~~~~~~~~l  840 (974)
T KOG1166|consen  769 SVLVSEYSPYGTLLDLIN-----TNKVMDEYLVMFFSCQMLRIVEHLH---AMGIIHGDIKPDNFLLRREICADSDSKGL  840 (974)
T ss_pred             ceeeeeccccccHHHhhc-----cCCCCCchhhhHHHHHHHHHHHHHH---hcceecccCCcceeEeecccCCCCcccce
Confidence            999999999999999994     3567999999999999999999999   99999999999999993       23469


Q ss_pred             EEccccCceec
Q 026214          205 KMFDFSLSISI  215 (241)
Q Consensus       205 ki~DfG~a~~~  215 (241)
                      +|+|||.|.-+
T Consensus       841 ~lIDfG~siDm  851 (974)
T KOG1166|consen  841 YLIDFGRSIDM  851 (974)
T ss_pred             EEEecccceee
Confidence            99999998755

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.68  E-value=3.9e-17  Score=136.61  Aligned_cols=161  Identities=17%  Similarity=0.274  Sum_probs=132.0

Q ss_pred             HHHHHHHhcCCCcCCeeecccceEEEEEEE-------CCeEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeE
Q 026214           54 AQELKLATNNYDQKNVITEDWGCILYKGFW-------QERLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGC  125 (241)
Q Consensus        54 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~  125 (241)
                      ..++......+....++-+|.||.||.|.+       +.+.|.+|.++... +-....++.|-..+..+.|||++++.++
T Consensus       276 ~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V  355 (563)
T KOG1024|consen  276 LQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGV  355 (563)
T ss_pred             HHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEE
Confidence            356666677788888999999999999976       23456677665432 2345668899999999999999999999


Q ss_pred             EecC-CcceEEEeeCCCCCHHHHHhhcCC---CCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCC
Q 026214          126 CLET-PIPILAFESVEYGNLRDRILSASQ---PQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEE  201 (241)
Q Consensus       126 ~~~~-~~~~lv~e~~~~gsL~~~l~~~~~---~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~  201 (241)
                      +.++ ..++.++.++.-|+|..++....+   ...+.++..+...++.|+++|+.|||   ..++||.||.++|.+||+.
T Consensus       356 ~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh---~~~ViHkDiAaRNCvIdd~  432 (563)
T KOG1024|consen  356 SIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLH---NHGVIHKDIAARNCVIDDQ  432 (563)
T ss_pred             EeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHH---hcCcccchhhhhcceehhh
Confidence            8654 578888999999999999983321   12455777888899999999999999   9999999999999999999


Q ss_pred             CcEEEccccCceecCC
Q 026214          202 NVAKMFDFSLSISIPE  217 (241)
Q Consensus       202 ~~~ki~DfG~a~~~~~  217 (241)
                      ..+||+|=.+++.+-+
T Consensus       433 LqVkltDsaLSRDLFP  448 (563)
T KOG1024|consen  433 LQVKLTDSALSRDLFP  448 (563)
T ss_pred             eeEEeccchhccccCc
Confidence            9999999999986644

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.64  E-value=1.2e-15  Score=134.31  Aligned_cols=142  Identities=13%  Similarity=0.065  Sum_probs=101.2

Q ss_pred             CCeeecccceEEEEEEE-CCeEEEEEEeeccCCcch----------------------------------------hhHH
Q 026214           67 KNVITEDWGCILYKGFW-QERLISVMRFRESNRDGH----------------------------------------GSCI  105 (241)
Q Consensus        67 ~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~----------------------------------------~~~~  105 (241)
                      .+.||.|++|.||+|+. +|+.||||+.++......                                        -.|.
T Consensus       122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~  201 (437)
T TIGR01982       122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR  201 (437)
T ss_pred             CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence            46899999999999999 899999999865421100                                        0244


Q ss_pred             HHHHHHHhcC-----CCceeeEeeEEecCCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHH-HHHHHh
Q 026214          106 NNIVYAAQMS-----HDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAH-ALAYLH  179 (241)
Q Consensus       106 ~E~~~l~~l~-----h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~-~l~~lH  179 (241)
                      +|...+.++.     ++++.-..-++......+|+|||++|++|.+.....    ....+   ...++..++. .+..+|
T Consensus       202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~----~~~~~---~~~ia~~~~~~~l~ql~  274 (437)
T TIGR01982       202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALD----EAGLD---RKALAENLARSFLNQVL  274 (437)
T ss_pred             HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHH----hcCCC---HHHHHHHHHHHHHHHHH
Confidence            5555555552     344332222333345679999999999998877432    11122   2345666655 467789


Q ss_pred             CCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          180 FGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       180 ~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                         ..+++|+|++|.||+++.++.++++|||++..++++
T Consensus       275 ---~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~~  310 (437)
T TIGR01982       275 ---RDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLSEE  310 (437)
T ss_pred             ---hCCceeCCCCcccEEECCCCcEEEEeCCCeeECCHH
Confidence               899999999999999999999999999999988754

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.63  E-value=2e-16  Score=149.27  Aligned_cols=94  Identities=17%  Similarity=0.243  Sum_probs=73.9

Q ss_pred             hcCC-CceeeEeeEE-------ecCCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCC
Q 026214          113 QMSH-DHILKLIGCC-------LETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPR  184 (241)
Q Consensus       113 ~l~h-~niv~l~~~~-------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~  184 (241)
                      .++| +||..+++++       ..+..+++++|++. ++|.+++...    ...+++..++.++.||+.||.|||   +.
T Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-~~L~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH---~~   99 (793)
T PLN00181         28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECED-VSLRQWLDNP----DRSVDAFECFHVFRQIVEIVNAAH---SQ   99 (793)
T ss_pred             hhhHHHHHHHhhcccCCccccccccchhhhhhccCC-ccHHHHHhcc----cccccHHHHHHHHHHHHHHHHHHH---hC
Confidence            4445 5777777776       23346778889885 6999999643    355899999999999999999999   99


Q ss_pred             CeEEccCCCCCeeEcC-------------------CCcEEEccccCcee
Q 026214          185 PIVYRDFKTAHILFNE-------------------ENVAKMFDFSLSIS  214 (241)
Q Consensus       185 ~ivH~dlk~~Nill~~-------------------~~~~ki~DfG~a~~  214 (241)
                      +|+||||||+||||+.                   ++.+|++|||+++.
T Consensus       100 gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~  148 (793)
T PLN00181        100 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRR  148 (793)
T ss_pred             CeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccc
Confidence            9999999999999964                   34566666666654

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.55  E-value=3e-15  Score=136.05  Aligned_cols=165  Identities=15%  Similarity=0.140  Sum_probs=120.3

Q ss_pred             CcCCeeecccceEEEEEEE--CCeEEEEEEee----cc-CCcc-hhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           65 DQKNVITEDWGCILYKGFW--QERLISVMRFR----ES-NRDG-HGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        65 ~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~----~~-~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      .....+|.|.+|.|+.+..  .....+.|.+.    .. .... ...+..|+.+-..+.|||++..+..+.+.....-.|
T Consensus       321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m  400 (601)
T KOG0590|consen  321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM  400 (601)
T ss_pred             CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence            4577899999998877776  33334444332    11 1111 122566777888899999988887777766666669


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||+++ +|..++...     ..+....+-.++.|++.|+.|+|   ..++.|||+|++|++++.+|.+||+|||.+..+.
T Consensus       401 E~~~~-Dlf~~~~~~-----~~~~~~e~~c~fKqL~~Gv~y~h---~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~  471 (601)
T KOG0590|consen  401 EYCPY-DLFSLVMSN-----GKLTPLEADCFFKQLLRGVKYLH---SMGLAHRDLKLENLLVTENGILKIIDFGAASVFR  471 (601)
T ss_pred             hcccH-HHHHHHhcc-----cccchhhhhHHHHHHHHHHHHHH---hcCceeccCccccEEEecCCceEEeecCcceeec
Confidence            99998 999999553     34788888899999999999999   9999999999999999999999999999998775


Q ss_pred             CCCccccce-eecCCceeeeecC
Q 026214          217 EGGTSGAKC-LKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~-~~~~~~~~~~~~e  238 (241)
                      -+....... ..-.+..-|.|||
T Consensus       472 ~~~e~~~~~~~g~~gS~pY~apE  494 (601)
T KOG0590|consen  472 YPWEKNIHESSGIVGSDPYLAPE  494 (601)
T ss_pred             cCcchhhhhhcCcccCCcCcCcc
Confidence            443332222 1222333456666

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.54  E-value=6e-14  Score=107.93  Aligned_cols=128  Identities=15%  Similarity=0.019  Sum_probs=96.4

Q ss_pred             CeeecccceEEEEEEECCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCcee-eEeeEEecCCcceEEEeeCCCCCHHH
Q 026214           68 NVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHIL-KLIGCCLETPIPILAFESVEYGNLRD  146 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~l~~~~~~~~~~~lv~e~~~~gsL~~  146 (241)
                      +.|+.|.++.||++...+..+++|....... ....+..|+.++..+.+.+++ +++.+.  ....++||||+++.++.+
T Consensus         4 ~~l~~G~~~~vy~~~~~~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l~~   80 (170)
T cd05151           4 SPLKGGMTNKNYRVEVANKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSELLT   80 (170)
T ss_pred             eecCCcccCceEEEEECCeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCcccc
Confidence            4678899999999999888999998765432 233567899999988655544 444433  334689999999877754


Q ss_pred             HHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCC-----eEEccCCCCCeeEcCCCcEEEccccCceec
Q 026214          147 RILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRP-----IVYRDFKTAHILFNEENVAKMFDFSLSISI  215 (241)
Q Consensus       147 ~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~-----ivH~dlk~~Nill~~~~~~ki~DfG~a~~~  215 (241)
                      .-          ..   ...++.+++.+|..||   ..+     ++|+|++|.||+++ ++.++++|||.+..-
T Consensus        81 ~~----------~~---~~~~~~~l~~~l~~LH---~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~~  137 (170)
T cd05151          81 ED----------FS---DPENLEKIAKLLKKLH---SSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGMN  137 (170)
T ss_pred             cc----------cc---CHHHHHHHHHHHHHHh---CCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccCC
Confidence            31          11   1245678999999999   666     59999999999998 668999999998753

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.52  E-value=3e-15  Score=138.75  Aligned_cols=168  Identities=18%  Similarity=0.114  Sum_probs=132.1

Q ss_pred             CCCcCCeeecccceEEEEEEECCeEEEEEEeeccC-CcchhhHHHHHHH--HHhcCCCceeeEeeEEecCCcceEEEeeC
Q 026214           63 NYDQKNVITEDWGCILYKGFWQERLISVMRFRESN-RDGHGSCINNIVY--AAQMSHDHILKLIGCCLETPIPILAFESV  139 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~--l~~l~h~niv~l~~~~~~~~~~~lv~e~~  139 (241)
                      ++...+.||++.|=.|.+|.+.+..|+||.+-+.+ .-....|.+++.-  ...+++||.+++.-+...+...|||=+|.
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~eG~vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqyv  103 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDREGLVVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQYV  103 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCCceEEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHHH
Confidence            56677899999999999999966669999986544 3344444443333  45558999999988888888899999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceec--CC
Q 026214          140 EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI--PE  217 (241)
Q Consensus       140 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~--~~  217 (241)
                      .+ +|+|++..     +..+...+..-|+.|++.||.-+|   ..+|.|+|||.+||||+....+.|+||..-+..  +.
T Consensus       104 kh-nLyDRlST-----RPFL~~iEKkWiaFQLL~al~qcH---~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPe  174 (1431)
T KOG1240|consen  104 KH-NLYDRLST-----RPFLVLIEKKWIAFQLLKALSQCH---KLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPE  174 (1431)
T ss_pred             hh-hhhhhhcc-----chHHHHHHHHHHHHHHHHHHHHHH---HcCccccccccceEEEeeechhhhhcccccCCccCCC
Confidence            75 99999933     445777778889999999999999   999999999999999999999999999876533  44


Q ss_pred             CCc--cccceeecCCceeeeecCC
Q 026214          218 GGT--SGAKCLKSERTEICCVREN  239 (241)
Q Consensus       218 ~~~--~~~~~~~~~~~~~~~~~e~  239 (241)
                      |..  ..-..=+..+..+|.|||+
T Consensus       175 DNPadf~fFFDTSrRRtCYiAPER  198 (1431)
T KOG1240|consen  175 DNPADFTFFFDTSRRRTCYIAPER  198 (1431)
T ss_pred             CCcccceEEEecCCceeeecChHh
Confidence            433  2333345556679999996

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.50  E-value=4.2e-13  Score=102.51  Aligned_cols=164  Identities=16%  Similarity=0.117  Sum_probs=119.8

Q ss_pred             cCCeeecccceEEEEEEECCeEEEEEEeeccC--------CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEe
Q 026214           66 QKNVITEDWGCILYKGFWQERLISVMRFRESN--------RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFE  137 (241)
Q Consensus        66 ~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  137 (241)
                      ....|-+|+-+.|+++.+.|+...||.-....        .-..++..+|.+++.++.--.|.-..-++.+...-.++||
T Consensus        11 ~l~likQGAEArv~~~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME   90 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYME   90 (229)
T ss_pred             cceeeeccceeeEeeeccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEE
Confidence            56789999999999999999998888532211        1123567889999999976666555556666667778899


Q ss_pred             eCCC-CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCC---cEEEccccCce
Q 026214          138 SVEY-GNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEEN---VAKMFDFSLSI  213 (241)
Q Consensus       138 ~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~---~~ki~DfG~a~  213 (241)
                      |+++ .++.+++...-  .. +........++..+-..+.-||   ...++|+||.++||++..++   .+.++|||++.
T Consensus        91 ~~~g~~~vk~~i~~~~--~~-~~~d~~~~~~~~~iG~~igklH---~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~  164 (229)
T KOG3087|consen   91 FIDGASTVKDFILSTM--ED-ESEDEGLAELARRIGELIGKLH---DNDIIHGDLTTSNILLRSDGNQITPILIDFGLSS  164 (229)
T ss_pred             eccchhHHHHHHHHHc--cC-cccchhHHHHHHHHHHHHHHhh---hCCeecccccccceEEecCCCcCceEEEeecchh
Confidence            9985 38888887762  12 2233333678899999999999   99999999999999996544   46899999998


Q ss_pred             ecCCCCccccceeecCCceeee
Q 026214          214 SIPEGGTSGAKCLKSERTEICC  235 (241)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~  235 (241)
                      .-..++.......+-+++-.+-
T Consensus       165 ~s~~~EDKgVDLYVlErA~lsT  186 (229)
T KOG3087|consen  165 VSRLPEDKGVDLYVLERAVLST  186 (229)
T ss_pred             cccCcccccceeeeehHhHhcc
Confidence            7666655555555544444433

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=99.47  E-value=1.4e-13  Score=123.18  Aligned_cols=146  Identities=10%  Similarity=0.048  Sum_probs=94.9

Q ss_pred             cCCCcCCeeecccceEEEEEEE-C-CeEEEEEEeeccCCc--------------------------c--------hh---
Q 026214           62 NNYDQKNVITEDWGCILYKGFW-Q-ERLISVMRFRESNRD--------------------------G--------HG---  102 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~-~-~~~vavK~~~~~~~~--------------------------~--------~~---  102 (241)
                      ..|+. +.||+|++|.||+|+. + |+.||||+.++....                          .        .+   
T Consensus       120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~  198 (537)
T PRK04750        120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH  198 (537)
T ss_pred             HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence            34665 7899999999999998 5 999999998754210                          0        01   


Q ss_pred             ---hHHHHHHHHHhcC----CCceeeEeeEE-ecCCcceEEEeeCCCCCHHHHHhhc-CCCCCCCCCHHHHHHHHHHHHH
Q 026214          103 ---SCINNIVYAAQMS----HDHILKLIGCC-LETPIPILAFESVEYGNLRDRILSA-SQPQTEPLLMKHRLKIAMDIAH  173 (241)
Q Consensus       103 ---~~~~E~~~l~~l~----h~niv~l~~~~-~~~~~~~lv~e~~~~gsL~~~l~~~-~~~~~~~l~~~~~~~i~~~i~~  173 (241)
                         .+.+|...+.++.    +.+.+.+-.++ ......+|||||++|+++.+.-.-. .+.....+....+..++.|   
T Consensus       199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Q---  275 (537)
T PRK04750        199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQ---  275 (537)
T ss_pred             HhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHH---
Confidence               2445555555552    33333332233 2355678999999999998753211 0000111222223333333   


Q ss_pred             HHHHHhCCCCCCeEEccCCCCCeeEcCCC----cEEEccccCceecCCC
Q 026214          174 ALAYLHFGFPRPIVYRDFKTAHILFNEEN----VAKMFDFSLSISIPEG  218 (241)
Q Consensus       174 ~l~~lH~~~~~~ivH~dlk~~Nill~~~~----~~ki~DfG~a~~~~~~  218 (241)
                          +.   ..+++|+|++|.||+++.++    .+++.|||++..+++.
T Consensus       276 ----if---~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~~  317 (537)
T PRK04750        276 ----VF---RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNKE  317 (537)
T ss_pred             ----HH---hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCHH
Confidence                34   56999999999999999887    9999999999988664

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.47  E-value=1.8e-12  Score=101.88  Aligned_cols=140  Identities=9%  Similarity=0.060  Sum_probs=101.4

Q ss_pred             CCeeecccceEEEEEEE-C-------CeEEEEEEeeccCC---------------------cc-hh----hHHHHHHHHH
Q 026214           67 KNVITEDWGCILYKGFW-Q-------ERLISVMRFRESNR---------------------DG-HG----SCINNIVYAA  112 (241)
Q Consensus        67 ~~~lg~G~~g~Vy~~~~-~-------~~~vavK~~~~~~~---------------------~~-~~----~~~~E~~~l~  112 (241)
                      ...||.|--+.||.|.. +       +..+|||..+....                     .+ .+    ...+|...|.
T Consensus         2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~   81 (197)
T cd05146           2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK   81 (197)
T ss_pred             CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence            35789999999999986 3       37899998653210                     01 11    1347999999


Q ss_pred             hcCC--CceeeEeeEEecCCcceEEEeeCCCCCHHH-HHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHH-hCCCCCCeEE
Q 026214          113 QMSH--DHILKLIGCCLETPIPILAFESVEYGNLRD-RILSASQPQTEPLLMKHRLKIAMDIAHALAYL-HFGFPRPIVY  188 (241)
Q Consensus       113 ~l~h--~niv~l~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~l-H~~~~~~ivH  188 (241)
                      ++..  -+++.++++    ...++||||+.+..+.. .+.      ...++......+..+++.+|..| |   ..+++|
T Consensus        82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lk------d~~~~~~~~~~i~~~i~~~l~~l~H---~~glVH  148 (197)
T cd05146          82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLK------DAKLNDEEMKNAYYQVLSMMKQLYK---ECNLVH  148 (197)
T ss_pred             HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhh------ccccCHHHHHHHHHHHHHHHHHHHH---hCCeec
Confidence            9953  456666654    45789999997643322 221      12245556677889999999998 8   889999


Q ss_pred             ccCCCCCeeEcCCCcEEEccccCceecCCCCc
Q 026214          189 RDFKTAHILFNEENVAKMFDFSLSISIPEGGT  220 (241)
Q Consensus       189 ~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~  220 (241)
                      +||++.|||++ ++.+.|+|||.|.....+..
T Consensus       149 GDLs~~NIL~~-~~~v~iIDF~qav~~~hp~a  179 (197)
T cd05146         149 ADLSEYNMLWH-DGKVWFIDVSQSVEPTHPHG  179 (197)
T ss_pred             CCCCHHHEEEE-CCcEEEEECCCceeCCCCCH
Confidence            99999999997 46799999999988776543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.41  E-value=6.7e-14  Score=112.58  Aligned_cols=138  Identities=19%  Similarity=0.287  Sum_probs=113.9

Q ss_pred             cCCeeecccceEEEEEEECCeEEEEEEeecc--CCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCCCCC
Q 026214           66 QKNVITEDWGCILYKGFWQERLISVMRFRES--NRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGN  143 (241)
Q Consensus        66 ~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs  143 (241)
                      ...+|.+.-.|..|+|.+.+..+++|++.-.  .......|..|.-.|+.+.||||++++|.|.++..+.++..||+.||
T Consensus       194 l~tkl~e~hsgelwrgrwqgndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gs  273 (448)
T KOG0195|consen  194 LITKLAESHSGELWRGRWQGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGS  273 (448)
T ss_pred             hhhhhccCCCcccccccccCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchH
Confidence            3457888889999999998888888887543  22234568889889999999999999999999999999999999999


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEc
Q 026214          144 LRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMF  207 (241)
Q Consensus       144 L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~  207 (241)
                      |+.++++.   ..-.++.....+++.++++|++|||+- +.-|.---|.+..++||++.+++|+
T Consensus       274 lynvlhe~---t~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltaris  333 (448)
T KOG0195|consen  274 LYNVLHEQ---TSVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARIS  333 (448)
T ss_pred             HHHHHhcC---ccEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhhee
Confidence            99999887   344567788999999999999999942 1123445689999999999888765

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.39  E-value=6e-12  Score=96.44  Aligned_cols=134  Identities=17%  Similarity=0.154  Sum_probs=103.6

Q ss_pred             eeecccceEEEEEEECCeEEEEEEeeccC---Cc-----chhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCC
Q 026214           69 VITEDWGCILYKGFWQERLISVMRFRESN---RD-----GHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVE  140 (241)
Q Consensus        69 ~lg~G~~g~Vy~~~~~~~~vavK~~~~~~---~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~  140 (241)
                      .+++|+-+.+|.+.+-+.++++|.-.+..   +.     ...+..+|..++.++.--.|....-+..+.+...++|||++
T Consensus         3 ~i~~GAEa~i~~~~~~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I~   82 (204)
T COG3642           3 LIKQGAEAIIYLTDFLGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYIE   82 (204)
T ss_pred             hhhCCcceeEEeeeccCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEeC
Confidence            57889999999998877677777533321   01     12456889999999977676666666777888899999999


Q ss_pred             CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          141 YGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       141 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      |..|.+.+...            ...++..+-.-+.-||   ..+|+|+||.++||++.... +.++|||++..-...
T Consensus        83 G~~lkd~l~~~------------~~~~~r~vG~~vg~lH---~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~s~~~  144 (204)
T COG3642          83 GELLKDALEEA------------RPDLLREVGRLVGKLH---KAGIVHGDLTTSNIILSGGR-IYFIDFGLGEFSDEV  144 (204)
T ss_pred             ChhHHHHHHhc------------chHHHHHHHHHHHHHH---hcCeecCCCccceEEEeCCc-EEEEECCcccccccH
Confidence            88888888332            2457777888888999   99999999999999996654 999999999865443

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=99.36  E-value=1.4e-11  Score=98.67  Aligned_cols=142  Identities=20%  Similarity=0.231  Sum_probs=106.2

Q ss_pred             CeeecccceEEEEEEEC-CeEEEEEEeeccCC-cchhhHHHHHHHHHhcCC--CceeeEeeEEecC---CcceEEEeeCC
Q 026214           68 NVITEDWGCILYKGFWQ-ERLISVMRFRESNR-DGHGSCINNIVYAAQMSH--DHILKLIGCCLET---PIPILAFESVE  140 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~---~~~~lv~e~~~  140 (241)
                      +.|+.|..+.||++... +..+++|....... .....+..|..++..+.+  .++++++.+....   +..+++|||++
T Consensus         4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~   83 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD   83 (223)
T ss_pred             eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence            56889999999999884 48899998765432 134678899999999965  3456777776553   25689999999


Q ss_pred             CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCC---------------------------------------
Q 026214          141 YGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFG---------------------------------------  181 (241)
Q Consensus       141 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---------------------------------------  181 (241)
                      |.++.+.+..      ..+++.....++.+++.+|..||..                                       
T Consensus        84 G~~l~~~~~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (223)
T cd05154          84 GRVLRDRLLR------PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAM  157 (223)
T ss_pred             CEecCCCCCC------CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHH
Confidence            8877765521      2356666677777777777777731                                       


Q ss_pred             --------------CCCCeEEccCCCCCeeEcC--CCcEEEccccCceec
Q 026214          182 --------------FPRPIVYRDFKTAHILFNE--ENVAKMFDFSLSISI  215 (241)
Q Consensus       182 --------------~~~~ivH~dlk~~Nill~~--~~~~ki~DfG~a~~~  215 (241)
                                    ....++|+|+.|.||+++.  ++.+.|+||+.+..-
T Consensus       158 ~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~g  207 (223)
T cd05154         158 ERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATLG  207 (223)
T ss_pred             HHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccccC
Confidence                          1245799999999999998  667899999988743

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.36  E-value=8.5e-14  Score=122.82  Aligned_cols=154  Identities=18%  Similarity=0.107  Sum_probs=123.4

Q ss_pred             eecccceEEEEEEE-----CCeEEEEEEeeccCCc--chhhHHHHHHHHHhcC-CCceeeEeeEEecCCcceEEEeeCCC
Q 026214           70 ITEDWGCILYKGFW-----QERLISVMRFRESNRD--GHGSCINNIVYAAQMS-HDHILKLIGCCLETPIPILAFESVEY  141 (241)
Q Consensus        70 lg~G~~g~Vy~~~~-----~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~  141 (241)
                      +|.|.||.|+.+.-     .+..+|+|.+.+....  .......|-.++..++ ||.++++.-.++.+...++++++..+
T Consensus         2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg   81 (612)
T KOG0603|consen    2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG   81 (612)
T ss_pred             CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence            68899998876643     5667888877654311  1124556778888886 99999999999999999999999999


Q ss_pred             CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCcc
Q 026214          142 GNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTS  221 (241)
Q Consensus       142 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~  221 (241)
                      |.|...+...     .-..+.....+...++-++.++|   ..+++|||+|++||+++.+|++++.|||+++..-.....
T Consensus        82 g~lft~l~~~-----~~f~~~~~~~~~aelaLald~lh---~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~  153 (612)
T KOG0603|consen   82 GDLFTRLSKE-----VMFDELDVAFYLAELALALDHLH---KLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA  153 (612)
T ss_pred             chhhhccccC-----CchHHHHHHHHHHHHHHHHhhcc---hhHHHHhcccccceeecccCccccCCchhhhHhHhhhhc
Confidence            9998888543     33667777788889999999999   999999999999999999999999999999876544333


Q ss_pred             ccceeecCCceeeeecC
Q 026214          222 GAKCLKSERTEICCVRE  238 (241)
Q Consensus       222 ~~~~~~~~~~~~~~~~e  238 (241)
                             .++..|+|||
T Consensus       154 -------cgt~eymApE  163 (612)
T KOG0603|consen  154 -------CGTYEYRAPE  163 (612)
T ss_pred             -------ccchhhhhhH
Confidence                   4555667776

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.32  E-value=1.1e-11  Score=102.43  Aligned_cols=149  Identities=17%  Similarity=0.180  Sum_probs=96.5

Q ss_pred             CCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC---cchhhHHHHHHHHHhcC----------CCceeeEeeEEec
Q 026214           64 YDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR---DGHGSCINNIVYAAQMS----------HDHILKLIGCCLE  128 (241)
Q Consensus        64 ~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~----------h~niv~l~~~~~~  128 (241)
                      +.....||.|+++.||.+++  ++..+|+|.+.....   ...+++.+|.-....+.          |-.++-.++...-
T Consensus        14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i   93 (288)
T PF14531_consen   14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI   93 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred             EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence            34567899999999999999  789999998765432   23455666655554432          2222222222211


Q ss_pred             ---------C---C-----cceEEEeeCCCCCHHHHHhh---cCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEE
Q 026214          129 ---------T---P-----IPILAFESVEYGNLRDRILS---ASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVY  188 (241)
Q Consensus       129 ---------~---~-----~~~lv~e~~~~gsL~~~l~~---~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH  188 (241)
                               .   .     ..+++|+-+. ++|.+++.-   ... ....+.....+.+..|++..+++||   ..+++|
T Consensus        94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~-~~~~l~~~arl~lT~Q~I~lvA~Lh---~~GlVH  168 (288)
T PF14531_consen   94 PGKPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQ-THSPLAFAARLSLTVQMIRLVANLH---SYGLVH  168 (288)
T ss_dssp             TTS-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTT-TSHHHHHHHHHHHHHHHHHHHHHHH---HTTEEE
T ss_pred             cCCCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhccc-ccchhHHHHHHHHHHHHHHHHHHHh---hcceEe
Confidence                     1   1     2366788775 699888653   211 1122344456677899999999999   999999


Q ss_pred             ccCCCCCeeEcCCCcEEEccccCceecCC
Q 026214          189 RDFKTAHILFNEENVAKMFDFSLSISIPE  217 (241)
Q Consensus       189 ~dlk~~Nill~~~~~~ki~DfG~a~~~~~  217 (241)
                      +||+|+|++++.+|.+.++||+.....+.
T Consensus       169 gdi~~~nfll~~~G~v~Lg~F~~~~r~g~  197 (288)
T PF14531_consen  169 GDIKPENFLLDQDGGVFLGDFSSLVRAGT  197 (288)
T ss_dssp             ST-SGGGEEE-TTS-EEE--GGGEEETTE
T ss_pred             cccceeeEEEcCCCCEEEcChHHHeecCc
Confidence            99999999999999999999998876554

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=99.32  E-value=5.6e-11  Score=98.13  Aligned_cols=142  Identities=13%  Similarity=0.029  Sum_probs=104.1

Q ss_pred             CCeeecccceEEEEEEECCeEEEEEEeeccCCc-ch----------hhHHHHHHHHHhcCCCce--eeEeeEEec-----
Q 026214           67 KNVITEDWGCILYKGFWQERLISVMRFRESNRD-GH----------GSCINNIVYAAQMSHDHI--LKLIGCCLE-----  128 (241)
Q Consensus        67 ~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~-~~----------~~~~~E~~~l~~l~h~ni--v~l~~~~~~-----  128 (241)
                      .+.+-......|.++...|+.+.||+....... ..          ..+.+|...+.+|...+|  +.++++...     
T Consensus        27 ~e~v~~~~~rrvvr~~~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~  106 (268)
T PRK15123         27 GEVFRELEGRRTLRFELAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA  106 (268)
T ss_pred             CcEEecCCCceEEEEEECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence            455655555567787778999999977443211 01          147899999988854443  344555543     


Q ss_pred             CCcceEEEeeCCCC-CHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcC-------
Q 026214          129 TPIPILAFESVEYG-NLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNE-------  200 (241)
Q Consensus       129 ~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~-------  200 (241)
                      ....++|||++++. +|.+++...   ...+.+......++.+++..+.-||   ..+|+|+|++++|||++.       
T Consensus       107 ~~~s~LVte~l~~~~sL~~~~~~~---~~~~~~~~~~~~ll~~la~~i~~LH---~~Gi~HgDL~~~NiLl~~~~~~~~~  180 (268)
T PRK15123        107 TRTSFIITEDLAPTISLEDYCADW---ATNPPDPRLKRMLIKRVATMVRDMH---AAGINHRDCYICHFLLHLPFPGREE  180 (268)
T ss_pred             cceeEEEEeeCCCCccHHHHHHhh---cccCCCHHHHHHHHHHHHHHHHHHH---HCcCccCCCChhhEEEeccccCCCC
Confidence            23478999999875 899998543   1233556677789999999999999   999999999999999975       


Q ss_pred             CCcEEEccccCcee
Q 026214          201 ENVAKMFDFSLSIS  214 (241)
Q Consensus       201 ~~~~ki~DfG~a~~  214 (241)
                      +..+.++||+.+..
T Consensus       181 ~~~~~LIDl~r~~~  194 (268)
T PRK15123        181 DLKLSVIDLHRAQI  194 (268)
T ss_pred             CceEEEEECCcccc
Confidence            46899999998864

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.32  E-value=4.3e-12  Score=107.06  Aligned_cols=89  Identities=18%  Similarity=0.325  Sum_probs=73.0

Q ss_pred             CCCceeeEeeEEecC---------------------------CcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHH
Q 026214          115 SHDHILKLIGCCLET---------------------------PIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKI  167 (241)
Q Consensus       115 ~h~niv~l~~~~~~~---------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i  167 (241)
                      .|||||++.++|.++                           ..+|+||..++ .||.+++..+      ..+.....-+
T Consensus       274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~------~~s~r~~~~~  346 (598)
T KOG4158|consen  274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTR------HRSYRTGRVI  346 (598)
T ss_pred             CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcC------CCchHHHHHH
Confidence            599999999887441                           24689999887 5999999543      3566677779


Q ss_pred             HHHHHHHHHHHhCCCCCCeEEccCCCCCeeE--cCC--CcEEEccccCce
Q 026214          168 AMDIAHALAYLHFGFPRPIVYRDFKTAHILF--NEE--NVAKMFDFSLSI  213 (241)
Q Consensus       168 ~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill--~~~--~~~ki~DfG~a~  213 (241)
                      +.|+++|+.|||   ..++.|||+|++|||+  |++  -.+.|+|||.+-
T Consensus       347 laQlLEav~hL~---~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcL  393 (598)
T KOG4158|consen  347 LAQLLEAVTHLH---KHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCL  393 (598)
T ss_pred             HHHHHHHHHHHH---HccchhhcccccceEEEecCCCCcEEEEcccceee
Confidence            999999999999   9999999999999999  333  358899999874

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.31  E-value=2.6e-12  Score=112.84  Aligned_cols=99  Identities=31%  Similarity=0.445  Sum_probs=89.9

Q ss_pred             HhcCCCceeeEeeEEecCCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCe-EEcc
Q 026214          112 AQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPI-VYRD  190 (241)
Q Consensus       112 ~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i-vH~d  190 (241)
                      +.+.|.|+.+++|.+..+...+.|++||..|||.|.+...    ...+++.-...++.+++.||.|+|   ..+| .|+.
T Consensus         2 ~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~----~~~~d~~F~~s~~rdi~~Gl~ylh---~s~i~~hg~   74 (484)
T KOG1023|consen    2 RQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNE----DIKLDYFFILSFIRDISKGLAYLH---NSPIGYHGA   74 (484)
T ss_pred             cccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcc----ccCccHHHHHHHHHHHHHHHHHHh---cCcceeeee
Confidence            5678999999999999999999999999999999999774    456888888999999999999999   5454 9999


Q ss_pred             CCCCCeeEcCCCcEEEccccCceecCC
Q 026214          191 FKTAHILFNEENVAKMFDFSLSISIPE  217 (241)
Q Consensus       191 lk~~Nill~~~~~~ki~DfG~a~~~~~  217 (241)
                      ++++|.++|..+.+|++|||+....+.
T Consensus        75 l~s~nClvd~~w~lklt~~Gl~~~~~~  101 (484)
T KOG1023|consen   75 LKSSNCLVDSRWVLKLTDFGLNSLLEE  101 (484)
T ss_pred             eccccceeeeeEEEEechhhhcccccc
Confidence            999999999999999999999987753

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=99.27  E-value=9e-11  Score=91.80  Aligned_cols=127  Identities=13%  Similarity=0.139  Sum_probs=84.2

Q ss_pred             EEEEEE-CCeEEEEEEeeccCCc---------------------c-----hhhHHHHHHHHHhcCCC--ceeeEeeEEec
Q 026214           78 LYKGFW-QERLISVMRFRESNRD---------------------G-----HGSCINNIVYAAQMSHD--HILKLIGCCLE  128 (241)
Q Consensus        78 Vy~~~~-~~~~vavK~~~~~~~~---------------------~-----~~~~~~E~~~l~~l~h~--niv~l~~~~~~  128 (241)
                      ||.|.. ++..+|+|........                     .     .....+|...|.++..-  ++++++++.  
T Consensus         2 Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~--   79 (188)
T PF01163_consen    2 VYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN--   79 (188)
T ss_dssp             EEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE--
T ss_pred             EEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe--
Confidence            899998 8899999987542100                     0     12357899999999766  466666442  


Q ss_pred             CCcceEEEeeCC--CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHH-HhCCCCCCeEEccCCCCCeeEcCCCcEE
Q 026214          129 TPIPILAFESVE--YGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAY-LHFGFPRPIVYRDFKTAHILFNEENVAK  205 (241)
Q Consensus       129 ~~~~~lv~e~~~--~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~-lH~~~~~~ivH~dlk~~Nill~~~~~~k  205 (241)
                        ...+||||++  |..+..+....       ++......++.+++..+.. +|   ..+++|+||++.|||++++ .+.
T Consensus        80 --~~~ivME~I~~~G~~~~~l~~~~-------~~~~~~~~~~~~il~~~~~~~~---~~givHGDLs~~NIlv~~~-~~~  146 (188)
T PF01163_consen   80 --RNVIVMEYIGEDGVPLPRLKDVD-------LSPEEPKELLEEILEEIIKMLH---KAGIVHGDLSEYNILVDDG-KVY  146 (188)
T ss_dssp             --TTEEEEE--EETTEEGGCHHHCG-------GGGSTHHHHHHHHHHHHHHHHH---CTTEEESS-STTSEEEETT-CEE
T ss_pred             --CCEEEEEecCCCccchhhHHhcc-------ccchhHHHHHHHHHHHHHHHHH---hcCceecCCChhhEEeecc-eEE
Confidence              4579999998  65555444221       2233445677777775555 68   8999999999999999887 999


Q ss_pred             EccccCceecCCCC
Q 026214          206 MFDFSLSISIPEGG  219 (241)
Q Consensus       206 i~DfG~a~~~~~~~  219 (241)
                      |+|||.|.....+.
T Consensus       147 iIDf~qav~~~~p~  160 (188)
T PF01163_consen  147 IIDFGQAVDSSHPN  160 (188)
T ss_dssp             E--GTTEEETTSTT
T ss_pred             EEecCcceecCCcc
Confidence            99999998776554

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.11  E-value=9.3e-12  Score=113.43  Aligned_cols=173  Identities=15%  Similarity=0.142  Sum_probs=130.9

Q ss_pred             hcCCCcCCeeecccceEEEEEEE---CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcC-CCceeeEeeEEecCCcceE
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW---QERLISVMRFRESN--RDGHGSCINNIVYAAQMS-HDHILKLIGCCLETPIPIL  134 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~---~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~l  134 (241)
                      ...|...+.||+|+++.|-....   ....+|+|.+....  .........|..+-..+. |+|++.+++...+....++
T Consensus        19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~   98 (601)
T KOG0590|consen   19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL   98 (601)
T ss_pred             cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence            34566677799999999887776   44567777665443  122233444777777775 9999999999999999999


Q ss_pred             EEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCC-cEEEccccCce
Q 026214          135 AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEEN-VAKMFDFSLSI  213 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~-~~ki~DfG~a~  213 (241)
                      ++++..++++.+.+...   .....+......++.|+..++.|+|.  ..++.|+|++|+|.+++..+ ..+++|||+|.
T Consensus        99 ~~~~s~g~~~f~~i~~~---~~~~~~~~~~~~~~~ql~s~l~~~H~--~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At  173 (601)
T KOG0590|consen   99 SLSYSDGGSLFSKISHP---DSTGTSSSSASRYLPQLNSGLSYLHP--ENGVTHRDIKPSNSLLDESGSALKIADFGLAT  173 (601)
T ss_pred             ccCcccccccccccccC---CccCCCCcchhhhhhhhccCccccCc--ccccccCCCCCccchhccCCCcccCCCchhhc
Confidence            99999999998888321   12245666677899999999999996  56899999999999999999 99999999999


Q ss_pred             ecCC-CCccccceeecC-CceeeeecCC
Q 026214          214 SIPE-GGTSGAKCLKSE-RTEICCVREN  239 (241)
Q Consensus       214 ~~~~-~~~~~~~~~~~~-~~~~~~~~e~  239 (241)
                      .+.. ++..... .... ....|.+||-
T Consensus       174 ~~~~~~g~~~~~-~~~~g~s~~y~a~E~  200 (601)
T KOG0590|consen  174 AYRNKNGAERSL-KDRCGSSPPYGAPEH  200 (601)
T ss_pred             cccccCCcceee-ecccCCCCCCCCccc
Confidence            8877 4443332 2222 3667778873

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=99.10  E-value=1.7e-09  Score=94.46  Aligned_cols=142  Identities=11%  Similarity=0.099  Sum_probs=115.4

Q ss_pred             ceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEec----CCcceEEEeeCCC-CCHHHH
Q 026214           75 GCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLE----TPIPILAFESVEY-GNLRDR  147 (241)
Q Consensus        75 ~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv~e~~~~-gsL~~~  147 (241)
                      ..+.|+++.  +|..|.+|+++............-++.++++.|+|+|++..++..    +..+.+|++|.++ +||.++
T Consensus       289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~  368 (655)
T KOG3741|consen  289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL  368 (655)
T ss_pred             cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence            467899998  999999999976554454444556888999999999999998863    4568899999985 578877


Q ss_pred             HhhcC----------CCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCC
Q 026214          148 ILSAS----------QPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE  217 (241)
Q Consensus       148 l~~~~----------~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~  217 (241)
                      .....          -.....+++..++.++.|+..||.++|   +.|+..+-|.+.+||++.+.+++|+.-|....+.+
T Consensus       369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIH---ssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~  445 (655)
T KOG3741|consen  369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIH---SSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQE  445 (655)
T ss_pred             HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHH---hcCceeecccHhHeEeeCcceEEEecccceeeecC
Confidence            64321          112445778999999999999999999   89999999999999999988999999998888876


Q ss_pred             CC
Q 026214          218 GG  219 (241)
Q Consensus       218 ~~  219 (241)
                      +.
T Consensus       446 d~  447 (655)
T KOG3741|consen  446 DP  447 (655)
T ss_pred             CC
Confidence            65

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.09  E-value=2.9e-10  Score=87.83  Aligned_cols=74  Identities=18%  Similarity=0.148  Sum_probs=61.6

Q ss_pred             CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCcc
Q 026214          142 GNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTS  221 (241)
Q Consensus       142 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~  221 (241)
                      |||.+++...    ..++++..+..++.|++.||.|||   +.+      ||+|||++.++.+++  ||++........ 
T Consensus         1 GsL~~~l~~~----~~~l~~~~~~~i~~qi~~~L~~lH---~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~~-   64 (176)
T smart00750        1 VSLADILEVR----GRPLNEEEIWAVCLQCLRALRELH---RQA------KSGNILLTWDGLLKL--DGSVAFKTPEQS-   64 (176)
T ss_pred             CcHHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHH---hcC------CcccEeEcCccceee--ccceEeeccccC-
Confidence            6899999654    346999999999999999999999   666      999999999999999  999987755432 


Q ss_pred             ccceeecCCceeeeecC
Q 026214          222 GAKCLKSERTEICCVRE  238 (241)
Q Consensus       222 ~~~~~~~~~~~~~~~~e  238 (241)
                             .++..|+|||
T Consensus        65 -------~g~~~y~aPE   74 (176)
T smart00750       65 -------RVDPYFMAPE   74 (176)
T ss_pred             -------CCcccccChH
Confidence                   2456788888

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=99.04  E-value=1.4e-09  Score=97.27  Aligned_cols=121  Identities=17%  Similarity=0.135  Sum_probs=102.0

Q ss_pred             CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHH
Q 026214           84 QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKH  163 (241)
Q Consensus        84 ~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~  163 (241)
                      ++.+|.|...............+-+..++.++||||+++++.+...+..|+|+|.+.  .|...+...        ....
T Consensus        36 ~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l--------~~~~  105 (690)
T KOG1243|consen   36 DGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKEL--------GKEE  105 (690)
T ss_pred             cCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHh--------HHHH
Confidence            788888888877664445557778899999999999999999999999999999985  677777543        2445


Q ss_pred             HHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          164 RLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       164 ~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      +..-+.||+.||.|||+  ..+++|++|.-+.|+++..|.+||++|.++...+
T Consensus       106 v~~Gl~qIl~AL~FL~~--d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~  156 (690)
T KOG1243|consen  106 VCLGLFQILAALSFLND--DCNLVHGNVCKDSVFVNESGEWKLGGLELVSKAS  156 (690)
T ss_pred             HHHHHHHHHHHHHHHhc--cCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccc
Confidence            55678999999999986  6799999999999999999999999999886553

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.03  E-value=3.8e-10  Score=99.59  Aligned_cols=168  Identities=18%  Similarity=0.144  Sum_probs=129.9

Q ss_pred             CCcCCeeec--ccceEEEEEEE----CCeEEEEEEee--ccCCcchhhHHHHHHHHHhc-CCCceeeEeeEEecCCcceE
Q 026214           64 YDQKNVITE--DWGCILYKGFW----QERLISVMRFR--ESNRDGHGSCINNIVYAAQM-SHDHILKLIGCCLETPIPIL  134 (241)
Q Consensus        64 ~~~~~~lg~--G~~g~Vy~~~~----~~~~vavK~~~--~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l  134 (241)
                      |.....+|.  |.+|.||.+..    ++..+|+|+-+  .........=++|+...+++ .|+|.++....+...+..++
T Consensus       116 ~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfi  195 (524)
T KOG0601|consen  116 FPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFI  195 (524)
T ss_pred             cccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCccee
Confidence            556778899  99999999876    66788888733  23223344456788877788 69999999999999999999


Q ss_pred             EEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHH----HHHHHhCCCCCCeEEccCCCCCeeEcCC-CcEEEccc
Q 026214          135 AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAH----ALAYLHFGFPRPIVYRDFKTAHILFNEE-NVAKMFDF  209 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~----~l~~lH~~~~~~ivH~dlk~~Nill~~~-~~~ki~Df  209 (241)
                      -+|++. .+|.++.+..    ...++...++.+..+...    ||.++|   ..+++|-|+||.||+...+ ..++++||
T Consensus       196 qtE~~~-~sl~~~~~~~----~~~~p~~~l~~~~~~~~~~~~~al~~~h---s~~~~~~~~kp~~i~~~~~~~s~~~~df  267 (524)
T KOG0601|consen  196 QTELCG-ESLQSYCHTP----CNFLPDNLLWNSLRDWLSRDVTALSHLH---SNNIVHDDLKPANIFTTSDWTSCKLTDF  267 (524)
T ss_pred             eecccc-chhHHhhhcc----cccCCchhhhhHHhhhhhcccccccccC---CCcccccccchhheecccccceeecCCc
Confidence            999886 6888888765    233566666667777777    999999   9999999999999999988 88999999


Q ss_pred             cCceecCCCCccccce--eecCCceeeeecCC
Q 026214          210 SLSISIPEGGTSGAKC--LKSERTEICCVREN  239 (241)
Q Consensus       210 G~a~~~~~~~~~~~~~--~~~~~~~~~~~~e~  239 (241)
                      |+...+.+..-.....  ........|++||-
T Consensus       268 ~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~  299 (524)
T KOG0601|consen  268 GLVSKISDGNFSSVFKVSKRPEGDCIYAAKEL  299 (524)
T ss_pred             ceeEEccCCccccceeeeecCCCCceEeChhh
Confidence            9999998776333222  22245558888874

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=99.02  E-value=1.9e-09  Score=87.52  Aligned_cols=138  Identities=16%  Similarity=0.093  Sum_probs=99.3

Q ss_pred             CCcCCeeecccceEEEEEEE-CCeEEEEEEeeccCCc----------------------chhhHHHHHHHHHhcCCC--c
Q 026214           64 YDQKNVITEDWGCILYKGFW-QERLISVMRFRESNRD----------------------GHGSCINNIVYAAQMSHD--H  118 (241)
Q Consensus        64 ~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~----------------------~~~~~~~E~~~l~~l~h~--n  118 (241)
                      ...+..||.|--+.||.|.+ .+.++|||.-+....+                      ......+|.++|.+|...  .
T Consensus        93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~  172 (304)
T COG0478          93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK  172 (304)
T ss_pred             HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence            35678999999999999999 7999999965432110                      113468899999999655  6


Q ss_pred             eeeEeeEEecCCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeE
Q 026214          119 ILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILF  198 (241)
Q Consensus       119 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill  198 (241)
                      +++.+++    +...+|||+++|-.|...-          ++....-.++..|+.-+.-+-   ..|+||+|+++-||++
T Consensus       173 VP~P~~~----nRHaVvMe~ieG~eL~~~r----------~~~en~~~il~~il~~~~~~~---~~GiVHGDlSefNIlV  235 (304)
T COG0478         173 VPKPIAW----NRHAVVMEYIEGVELYRLR----------LDVENPDEILDKILEEVRKAY---RRGIVHGDLSEFNILV  235 (304)
T ss_pred             CCCcccc----ccceeeeehcccceeeccc----------CcccCHHHHHHHHHHHHHHHH---HcCccccCCchheEEE
Confidence            7777644    4567899999875554332          122333345555555555555   6799999999999999


Q ss_pred             cCCCcEEEccccCceecCCC
Q 026214          199 NEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       199 ~~~~~~ki~DfG~a~~~~~~  218 (241)
                      +++|.+.++||=-+.....+
T Consensus       236 ~~dg~~~vIDwPQ~v~~~hp  255 (304)
T COG0478         236 TEDGDIVVIDWPQAVPISHP  255 (304)
T ss_pred             ecCCCEEEEeCcccccCCCC
Confidence            99999999999766655444

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=99.01  E-value=6.8e-09  Score=82.71  Aligned_cols=126  Identities=15%  Similarity=0.107  Sum_probs=93.4

Q ss_pred             CCeEEEEEEeecc-C------CcchhhHHHHHHHHHhcCCCc--eeeEeeEEecCC----cceEEEeeCCCC-CHHHHHh
Q 026214           84 QERLISVMRFRES-N------RDGHGSCINNIVYAAQMSHDH--ILKLIGCCLETP----IPILAFESVEYG-NLRDRIL  149 (241)
Q Consensus        84 ~~~~vavK~~~~~-~------~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~----~~~lv~e~~~~g-sL~~~l~  149 (241)
                      ..+.+.+|..... .      ......+.+|...+..|...+  .+.++++.....    ..++|+|++++. +|.+++.
T Consensus        31 ~~~~y~~k~~~~~~~~~~~~~~~~~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~  110 (206)
T PF06293_consen   31 VGRRYYRKRLWNKLRRDRLRFPLRRSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQ  110 (206)
T ss_pred             cceEEEECCeechhccchhhhcccchHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHH
Confidence            4556666653321 1      123456888999888885433  456666665532    358999999874 7999996


Q ss_pred             hcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCC---cEEEccccCceecCC
Q 026214          150 SASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEEN---VAKMFDFSLSISIPE  217 (241)
Q Consensus       150 ~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~---~~ki~DfG~a~~~~~  217 (241)
                      ...     ..+......++.+++..+.-||   ..+|+|+|+++.|||++.+.   .+.++||+.++....
T Consensus       111 ~~~-----~~~~~~~~~ll~~l~~~i~~lH---~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~~  173 (206)
T PF06293_consen  111 QWE-----QLDPSQRRELLRALARLIAKLH---DAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRPS  173 (206)
T ss_pred             hhc-----ccchhhHHHHHHHHHHHHHHHH---HCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeCCC
Confidence            541     1556667789999999999999   99999999999999998877   899999999887553

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>PRK09902 hypothetical protein; Provisional

Probab=98.95  E-value=3.3e-08  Score=78.24  Aligned_cols=140  Identities=13%  Similarity=0.037  Sum_probs=104.1

Q ss_pred             eecccceEEEEEEECCeEEEEEEeecc---C---CcchhhHHHHHHHHHhcCCC--ceeeEeeEEecC----CcceEEEe
Q 026214           70 ITEDWGCILYKGFWQERLISVMRFRES---N---RDGHGSCINNIVYAAQMSHD--HILKLIGCCLET----PIPILAFE  137 (241)
Q Consensus        70 lg~G~~g~Vy~~~~~~~~vavK~~~~~---~---~~~~~~~~~E~~~l~~l~h~--niv~l~~~~~~~----~~~~lv~e  137 (241)
                      -|.|+.+-|+...+.|..+-+|+-..-   .   +.....|.+|+..+..|..-  .++++..+....    -..+||+|
T Consensus        26 ~~rgG~SgV~r~~~~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVTe  105 (216)
T PRK09902         26 YRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVTE  105 (216)
T ss_pred             cCCCCcceEEEEEeCCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEEE
Confidence            466788889998887778889976421   0   23457799999999999533  345555222221    24689999


Q ss_pred             eCCC-CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCc--EEEccccCcee
Q 026214          138 SVEY-GNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENV--AKMFDFSLSIS  214 (241)
Q Consensus       138 ~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~--~ki~DfG~a~~  214 (241)
                      -+++ -||.+++...   ...+.+......++.+++..+.-||   ..++.|+|+.+.||+++.++.  +.++||.-++.
T Consensus       106 ~L~g~~~L~~~l~~~---~~~~~~~~~k~~il~~va~~ia~LH---~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~  179 (216)
T PRK09902        106 DMAGFISIADWYAQH---AVSPYSDEVRQAMLKAVALAFKKMH---SVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR  179 (216)
T ss_pred             eCCCCccHHHHHhcC---CcCCcchHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence            7753 5899888554   2334677777899999999999999   999999999999999986666  99999987764


Q ss_pred             c
Q 026214          215 I  215 (241)
Q Consensus       215 ~  215 (241)
                      .
T Consensus       180 ~  180 (216)
T PRK09902        180 R  180 (216)
T ss_pred             h
Confidence            3

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=98.92  E-value=9.2e-09  Score=91.92  Aligned_cols=143  Identities=10%  Similarity=0.021  Sum_probs=95.8

Q ss_pred             CCeeecccceEEEEEEE-CCeEEEEEEeeccCCcc--------------------------hh--------------hHH
Q 026214           67 KNVITEDWGCILYKGFW-QERLISVMRFRESNRDG--------------------------HG--------------SCI  105 (241)
Q Consensus        67 ~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~--------------------------~~--------------~~~  105 (241)
                      .+.|+.++-|.||+|.. +|+.||||+.++.-...                          ..              .+.
T Consensus       130 ~~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~  209 (517)
T COG0661         130 PEPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR  209 (517)
T ss_pred             CCchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence            36899999999999999 79999999987642110                          00              134


Q ss_pred             HHHHHHHhc-----CCCceeeEeeEEecCCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhC
Q 026214          106 NNIVYAAQM-----SHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHF  180 (241)
Q Consensus       106 ~E~~~l~~l-----~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~  180 (241)
                      +|...+.++     +.|++.=..=|+...+...|+|||++|-.+.+...-.    ....+...+.....++.--..+   
T Consensus       210 ~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~----~~g~d~k~ia~~~~~~f~~q~~---  282 (517)
T COG0661         210 REAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALK----SAGIDRKELAELLVRAFLRQLL---  282 (517)
T ss_pred             HHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHH----hcCCCHHHHHHHHHHHHHHHHH---
Confidence            454444444     2444433333445567789999999998888875332    1234433333222222222222   


Q ss_pred             CCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          181 GFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       181 ~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                        ..+++|.|.+|.||+++.+|.+.+.|||+...+++.
T Consensus       283 --~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~~  318 (517)
T COG0661         283 --RDGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDPK  318 (517)
T ss_pred             --hcCccccCCCccceEEecCCcEEEEcCcceecCCHH
Confidence              348999999999999999999999999999888764

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.90  E-value=6.2e-10  Score=98.24  Aligned_cols=156  Identities=17%  Similarity=0.166  Sum_probs=122.5

Q ss_pred             ccCHHH-HHHHhcCCCcCCeeecccceEEEEEEE---CCeEEEEEEeeccCCcc--hhhHHHHHHHHHhc-CCCceeeEe
Q 026214           51 IFSAQE-LKLATNNYDQKNVITEDWGCILYKGFW---QERLISVMRFRESNRDG--HGSCINNIVYAAQM-SHDHILKLI  123 (241)
Q Consensus        51 ~~~~~~-~~~~~~~~~~~~~lg~G~~g~Vy~~~~---~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l-~h~niv~l~  123 (241)
                      .|.-.+ .......|.....||.|.|+.|+.+..   ++..+++|.+.......  ...-+.|+.+...+ .|.+++.++
T Consensus       253 i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~  332 (524)
T KOG0601|consen  253 IFTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKN  332 (524)
T ss_pred             eecccccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCC
Confidence            344444 334456788888999999999998766   67888999876543222  22235666666666 688899988


Q ss_pred             eEEecCCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCC-C
Q 026214          124 GCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEE-N  202 (241)
Q Consensus       124 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~-~  202 (241)
                      ..|...+..++-.||+.++++.....-     ...+++...+.+..|++.++.++|   +..++|+|++|+||++..+ +
T Consensus       333 ~~W~~~r~~~ip~e~~~~~s~~l~~~~-----~~~~d~~~~~~~~~q~~~~l~~i~---s~~~~~~d~~psni~i~~~~~  404 (524)
T KOG0601|consen  333 SSWSQLRQGYIPLEFCEGGSSSLRSVT-----SQMLDEDPRLRLTAQILTALNVIH---SKLFVHLDVKPSNILISNDGF  404 (524)
T ss_pred             CCccccccccCchhhhcCcchhhhhHH-----HHhcCcchhhhhHHHHHhcccccc---chhhhcccccccceeeccchh
Confidence            888888888888999998888777622     345788889999999999999999   9999999999999999875 8


Q ss_pred             cEEEccccCcee
Q 026214          203 VAKMFDFSLSIS  214 (241)
Q Consensus       203 ~~ki~DfG~a~~  214 (241)
                      ..+++|||.+..
T Consensus       405 ~~~~~~~~~~t~  416 (524)
T KOG0601|consen  405 FSKLGDFGCWTR  416 (524)
T ss_pred             hhhccccccccc
Confidence            899999999864

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=98.73  E-value=8.9e-09  Score=96.26  Aligned_cols=110  Identities=20%  Similarity=0.294  Sum_probs=77.1

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      -..|+..+.|..|+||.||.+.+  +...+|+| +.+.+.     .++-  ++....+|.+|                  
T Consensus        82 e~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~l-----ilRn--ilt~a~npfvv------------------  135 (1205)
T KOG0606|consen   82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNL-----ILRN--ILTFAGNPFVV------------------  135 (1205)
T ss_pred             ccccceeEeeccCCCCceeeeeccccccchhhc-ccccch-----hhhc--cccccCCccee------------------
Confidence            36788889999999999999988  57778883 333220     0110  22233344433                  


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceec
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI  215 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~  215 (241)
                         |+-..++..     .++++..        ++.++.|+|   +.+|+|||+||+|.+|+.-|++|++|||+++..
T Consensus       136 ---gDc~tllk~-----~g~lPvd--------mvla~Eylh---~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~G  193 (1205)
T KOG0606|consen  136 ---GDCATLLKN-----IGPLPVD--------MVLAVEYLH---SYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKG  193 (1205)
T ss_pred             ---chhhhhccc-----CCCCcch--------hhHHhHhhc---cCCeecCCCCCCcceeeecccccccchhhhhhh
Confidence               344444422     2334333        278899999   999999999999999999999999999998654

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=98.73  E-value=2.1e-09  Score=93.71  Aligned_cols=101  Identities=24%  Similarity=0.297  Sum_probs=83.4

Q ss_pred             cceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEcccc
Q 026214          131 IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFS  210 (241)
Q Consensus       131 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG  210 (241)
                      .+|+.|++|.-.+|.+++....  .....++...+.++.|++.|+.|      ++.+|+|+||.||++..+..+||.|||
T Consensus       330 ~lyI~Mn~c~~~tledWl~rr~--~~e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDFg  401 (516)
T KOG1033|consen  330 YLYIQMNLCEKETLEDWLRRRR--TGEERSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDFG  401 (516)
T ss_pred             chhhhhhhhhhhhHHHHhhCCC--cccccchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhhhh
Confidence            5788999999999999997542  24456778888999999999998      588999999999999999999999999


Q ss_pred             CceecCCCCc---cccceeecCCceeeeecCC
Q 026214          211 LSISIPEGGT---SGAKCLKSERTEICCVREN  239 (241)
Q Consensus       211 ~a~~~~~~~~---~~~~~~~~~~~~~~~~~e~  239 (241)
                      +........+   ......+..++.+|+.||.
T Consensus       402 l~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQ  433 (516)
T KOG1033|consen  402 LVTSQDKDETVAPAAASHTQQVGTLLYMSPEQ  433 (516)
T ss_pred             heeecccCCcccchhhhhhhcccccccCCHHH
Confidence            9988866652   2334456778889999983

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=98.72  E-value=3.5e-07  Score=73.92  Aligned_cols=142  Identities=9%  Similarity=-0.017  Sum_probs=85.5

Q ss_pred             CeeecccceEEEEEEECCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCc--eeeEeeEEecCCcceEEEeeCCCCC-H
Q 026214           68 NVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQMSHDH--ILKLIGCCLETPIPILAFESVEYGN-L  144 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~e~~~~gs-L  144 (241)
                      ..||+|..+.||+.  .+..+++|......  ......+|.+++..+..-+  +++.+++...++...++||+++|.+ +
T Consensus         7 ~~i~~G~t~~~y~~--~~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~~   82 (226)
T TIGR02172         7 TQTGEGGNGESYTH--KTGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRSF   82 (226)
T ss_pred             eeecCCCCcceeEe--cCCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccch
Confidence            57899999999985  34567788776533  3455788999999886433  4677777777777889999999753 2


Q ss_pred             HHHH--------------hh----cCCCCCCCCCHHHH-HHHHH----------HHHH-HHHHHhC-CCCCCeEEccCCC
Q 026214          145 RDRI--------------LS----ASQPQTEPLLMKHR-LKIAM----------DIAH-ALAYLHF-GFPRPIVYRDFKT  193 (241)
Q Consensus       145 ~~~l--------------~~----~~~~~~~~l~~~~~-~~i~~----------~i~~-~l~~lH~-~~~~~ivH~dlk~  193 (241)
                      ...+              ..    -........+.... ..+..          .+.. ...+|.. .....++|+|+.|
T Consensus        83 ~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~~~  162 (226)
T TIGR02172        83 SRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDFQI  162 (226)
T ss_pred             hhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCCCC
Confidence            1111              11    00000001111110 00100          0111 1122221 1234578999999


Q ss_pred             CCeeEcCCCcEEEccccCcee
Q 026214          194 AHILFNEENVAKMFDFSLSIS  214 (241)
Q Consensus       194 ~Nill~~~~~~ki~DfG~a~~  214 (241)
                      .||++++++ +.|+||+.+..
T Consensus       163 ~Nii~~~~~-~~iIDwe~a~~  182 (226)
T TIGR02172       163 GNLITSGKG-TYWIDLGDFGY  182 (226)
T ss_pred             CcEEEcCCC-cEEEechhcCc
Confidence            999999888 99999998864

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=98.64  E-value=2.7e-07  Score=82.56  Aligned_cols=141  Identities=11%  Similarity=0.013  Sum_probs=93.8

Q ss_pred             CCeeecccceEEEEEEE-CCeEEEEEEeeccCCcc-------------------------------hh------hHHHHH
Q 026214           67 KNVITEDWGCILYKGFW-QERLISVMRFRESNRDG-------------------------------HG------SCINNI  108 (241)
Q Consensus        67 ~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~-------------------------------~~------~~~~E~  108 (241)
                      .+.|+.-+.|.||+|.. +|..||||+-++.-...                               .+      .|.+|.
T Consensus       166 ~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA  245 (538)
T KOG1235|consen  166 EEPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEA  245 (538)
T ss_pred             cchhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHH
Confidence            46899999999999999 99999999876642210                               01      133343


Q ss_pred             HHHHhc----CCCc------eeeEeeEEecCCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q 026214          109 VYAAQM----SHDH------ILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYL  178 (241)
Q Consensus       109 ~~l~~l----~h~n------iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~l  178 (241)
                      +...++    .|-+      |++++  +.-.....|+||||+|..+.|.-.-.    ...++...+..-+.+...-+-+.
T Consensus       246 ~Nae~~~~~f~~~~~~~~V~VP~Vy--~~~st~RVLtME~~~G~~i~Dl~~i~----~~gi~~~~i~~~l~~~~~~qIf~  319 (538)
T KOG1235|consen  246 KNAERFRENFKDFSLLTYVLVPKVY--WDLSTKRVLTMEYVDGIKINDLDAID----KRGISPHDILNKLVEAYLEQIFK  319 (538)
T ss_pred             HhHHHHHHHHHhcccccceeCCeeh--hhcCcceEEEEEecCCccCCCHHHHH----HcCCCHHHHHHHHHHHHHHHHHh
Confidence            333222    3444      34443  33345678999999988766654322    33466665555554444444444


Q ss_pred             hCCCCCCeEEccCCCCCeeEcC----CCcEEEccccCceecCCC
Q 026214          179 HFGFPRPIVYRDFKTAHILFNE----ENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       179 H~~~~~~ivH~dlk~~Nill~~----~~~~ki~DfG~a~~~~~~  218 (241)
                      |     |++|.|-+|.||++..    ++.+.+-|||+...+...
T Consensus       320 ~-----GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~~  358 (538)
T KOG1235|consen  320 T-----GFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISHK  358 (538)
T ss_pred             c-----CCccCCCCCCcEEEecCCCCCccEEEEcccccccccHH
Confidence            4     7999999999999983    678999999998876543

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=98.63  E-value=4.8e-07  Score=72.91  Aligned_cols=154  Identities=14%  Similarity=0.122  Sum_probs=101.3

Q ss_pred             CHHHHHHHhcCCCcCC---eeecccceEEEEEEE-CCeEEEEEEeeccCCcc-------------------h-----hhH
Q 026214           53 SAQELKLATNNYDQKN---VITEDWGCILYKGFW-QERLISVMRFRESNRDG-------------------H-----GSC  104 (241)
Q Consensus        53 ~~~~~~~~~~~~~~~~---~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~-------------------~-----~~~  104 (241)
                      +.+.+........+..   .|+.|--+.||+|.. ++..+|+|++.......                   .     ...
T Consensus        36 t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~  115 (268)
T COG1718          36 TLETLRRLLSRGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWA  115 (268)
T ss_pred             HHHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHH
Confidence            3444444444444443   556677788999987 78999999986532111                   1     123


Q ss_pred             HHHHHHHHhcC--CCceeeEeeEEecCCcceEEEeeCCCC-CHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCC
Q 026214          105 INNIVYAAQMS--HDHILKLIGCCLETPIPILAFESVEYG-NLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFG  181 (241)
Q Consensus       105 ~~E~~~l~~l~--h~niv~l~~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~  181 (241)
                      ..|+..|.++.  +-.+++.+++.    .-.|+|||+... .-.-.|      ..-++.......+..+++..+.-|-. 
T Consensus       116 ~kEf~NL~R~~eAGVrvP~Pi~~~----~nVLvMEfIg~~g~pAP~L------kDv~~e~~e~~~~~~~~v~~~~~l~~-  184 (268)
T COG1718         116 RKEFRNLKRAYEAGVRVPEPIAFR----NNVLVMEFIGDDGLPAPRL------KDVPLELEEAEGLYEDVVEYMRRLYK-  184 (268)
T ss_pred             HHHHHHHHHHHHcCCCCCCceeec----CCeEEEEeccCCCCCCCCc------ccCCcCchhHHHHHHHHHHHHHHHHH-
Confidence            56777788873  34455555543    357899999642 111111      11223333566778888888887762 


Q ss_pred             CCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCC
Q 026214          182 FPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGG  219 (241)
Q Consensus       182 ~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~  219 (241)
                       ..++||+||+.=|||+. ++.+.|+|||-|.....+.
T Consensus       185 -~a~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~hp~  220 (268)
T COG1718         185 -EAGLVHGDLSEYNILVH-DGEPYIIDVSQAVTIDHPN  220 (268)
T ss_pred             -hcCcccccchhhheEEE-CCeEEEEECccccccCCCc
Confidence             48999999999999998 8899999999998776654

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=98.62  E-value=8.3e-07  Score=72.37  Aligned_cols=143  Identities=10%  Similarity=-0.054  Sum_probs=86.6

Q ss_pred             eecccc-eEEEEEEECCeEEEEEEeeccCCcchhhHHHHHHHHHhcC-CCceeeEeeEEecCCcceEEEeeCCCCCHHHH
Q 026214           70 ITEDWG-CILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQMS-HDHILKLIGCCLETPIPILAFESVEYGNLRDR  147 (241)
Q Consensus        70 lg~G~~-g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~  147 (241)
                      |..|.+ ..||+....+..+.+|......   .....+|+.++..+. +--+++++++....+..++|||+++|.+|...
T Consensus         6 ~~~g~~~~~v~~~~~~~~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~   82 (244)
T cd05150           6 VTEGQSGATVYRLDGKNPGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAAL   82 (244)
T ss_pred             cCCCCCcCeEEEEcCCCCcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhHh
Confidence            444444 7789998766778888775442   345678999888883 44466778777766678999999998777643


Q ss_pred             Hh----------------hcCCCC--CCCCCHH--HHHHH-----------------------HHHHHHHHHHHh-CCCC
Q 026214          148 IL----------------SASQPQ--TEPLLMK--HRLKI-----------------------AMDIAHALAYLH-FGFP  183 (241)
Q Consensus       148 l~----------------~~~~~~--~~~l~~~--~~~~i-----------------------~~~i~~~l~~lH-~~~~  183 (241)
                      ..                .-....  ..+....  .....                       ...+...|.-.. ....
T Consensus        83 ~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (244)
T cd05150          83 WEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAEED  162 (244)
T ss_pred             hcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCcCc
Confidence            21                000000  1111100  00000                       111111111111 1113


Q ss_pred             CCeEEccCCCCCeeEcCCCcEEEccccCceec
Q 026214          184 RPIVYRDFKTAHILFNEENVAKMFDFSLSISI  215 (241)
Q Consensus       184 ~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~  215 (241)
                      ..++|+|+.|.|||++++....|+||+.|..-
T Consensus       163 ~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~g  194 (244)
T cd05150         163 LVVTHGDACLPNIIVDPGKFSGFIDLGRLGVA  194 (244)
T ss_pred             eEEECCCCCCccEEEeCCcEEEEEEccccccc
Confidence            56899999999999999877889999988643

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=98.59  E-value=6.8e-07  Score=71.15  Aligned_cols=138  Identities=17%  Similarity=0.067  Sum_probs=90.4

Q ss_pred             HhcCCCcCCeeecccceEEEEEEECCeEEEEEEeeccCCcchhh---------HHHHHHHHHhcCCCc---eeeEeeEE-
Q 026214           60 ATNNYDQKNVITEDWGCILYKGFWQERLISVMRFRESNRDGHGS---------CINNIVYAAQMSHDH---ILKLIGCC-  126 (241)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~---------~~~E~~~l~~l~h~n---iv~l~~~~-  126 (241)
                      ..++|...+.+.......|.+-..++..+.+|.......-..+.         ..+.+..+.++...+   +..++.+. 
T Consensus        29 ~~~~~~~~kv~k~~~r~~ValIei~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~e  108 (229)
T PF06176_consen   29 LDNNYKIIKVFKNTKRNYVALIEIDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAAE  108 (229)
T ss_pred             HhCCceEEEeecCCCccEEEEEEECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeeee
Confidence            34667777777776666777777789999999876543221111         233444444443222   22222222 


Q ss_pred             ----ecCCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCC
Q 026214          127 ----LETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEEN  202 (241)
Q Consensus       127 ----~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~  202 (241)
                          ......+|+|||++|..|.+...         +++    .+...++.++.-+|   ..|++|+|.+|+|+++++++
T Consensus       109 kk~~~~~~~~~ll~EYIeG~~l~d~~~---------i~e----~~~~ki~~~ikqlH---~~G~~HGD~hpgNFlv~~~~  172 (229)
T PF06176_consen  109 KKIFRYTSSYVLLMEYIEGVELNDIED---------IDE----DLAEKIVEAIKQLH---KHGFYHGDPHPGNFLVSNNG  172 (229)
T ss_pred             eeeccceeEEEEEEEEecCeecccchh---------cCH----HHHHHHHHHHHHHH---HcCCccCCCCcCcEEEECCc
Confidence                22345678999999977766541         222    24566778899999   99999999999999998654


Q ss_pred             cEEEccccCcee
Q 026214          203 VAKMFDFSLSIS  214 (241)
Q Consensus       203 ~~ki~DfG~a~~  214 (241)
                       ++++||+..+.
T Consensus       173 -i~iID~~~k~~  183 (229)
T PF06176_consen  173 -IRIIDTQGKRM  183 (229)
T ss_pred             -EEEEECccccc
Confidence             89999987764

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=98.57  E-value=9.9e-07  Score=70.78  Aligned_cols=145  Identities=13%  Similarity=0.157  Sum_probs=84.5

Q ss_pred             CeeecccceEEEEEEECCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCC--ceeeEeeEEec---CCcceEEEeeCCCC
Q 026214           68 NVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQMSHD--HILKLIGCCLE---TPIPILAFESVEYG  142 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~l~~~~~~---~~~~~lv~e~~~~g  142 (241)
                      +.|+.|..+.||....++..+++|.....  .....+.+|..++..+...  .+++++.+...   ....+++|+++++.
T Consensus         3 ~~l~~G~~n~~~~v~~~~~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g~   80 (239)
T PF01636_consen    3 RPLSGGFSNRVYRVTTDDGRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPGR   80 (239)
T ss_dssp             EEEEESSSSEEEEEEETTSEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESSE
T ss_pred             ccCCCCCeeeEEEEEECCcEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEeccc
Confidence            46899999999999996689999987654  3456678888888888433  35566654432   33578999999987


Q ss_pred             CHHH----------------HHh---hcCCCCCCCCCHHH---------HHHH------------HHHHHH-HHHHHh--
Q 026214          143 NLRD----------------RIL---SASQPQTEPLLMKH---------RLKI------------AMDIAH-ALAYLH--  179 (241)
Q Consensus       143 sL~~----------------~l~---~~~~~~~~~l~~~~---------~~~i------------~~~i~~-~l~~lH--  179 (241)
                      ++..                .+.   ... ....+.....         ....            ...+.. .+..++  
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~l~~lh~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (239)
T PF01636_consen   81 PLDDELSPEQRPELLRQLGRALAQLHQVP-PPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEAL  159 (239)
T ss_dssp             EHHHTSTHHHHHHHHHHHHHHHHHHHHSH-TTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccchhhhhhccccc-ccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHhh
Confidence            7776                111   110 0111111110         0000            011111 222222  


Q ss_pred             --CCCCCCeEEccCCCCCeeEc-CCCcEEEccccCceec
Q 026214          180 --FGFPRPIVYRDFKTAHILFN-EENVAKMFDFSLSISI  215 (241)
Q Consensus       180 --~~~~~~ivH~dlk~~Nill~-~~~~~ki~DfG~a~~~  215 (241)
                        ......++|+|+.|.|||++ .++.+.|+||+.+..-
T Consensus       160 ~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~~  198 (239)
T PF01636_consen  160 LPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGWG  198 (239)
T ss_dssp             HHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EEE
T ss_pred             hccCCCcEEEEeccccccceeeeccceeEEEecccceEC
Confidence              12256799999999999999 5666689999988654

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.56  E-value=5.2e-08  Score=80.92  Aligned_cols=99  Identities=20%  Similarity=0.281  Sum_probs=81.8

Q ss_pred             HHHHHhcCCCceeeEeeEEecCC-----cceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCC
Q 026214          108 IVYAAQMSHDHILKLIGCCLETP-----IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGF  182 (241)
Q Consensus       108 ~~~l~~l~h~niv~l~~~~~~~~-----~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~  182 (241)
                      ...+-.+.|.|||+++.||.+..     ...+++|||..|+|..+|.+... ....+......+|+.||+.||.|||+. 
T Consensus       118 FdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~-~~~a~~~~~wkkw~tqIlsal~yLhs~-  195 (458)
T KOG1266|consen  118 FDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKK-NQKALFQKAWKKWCTQILSALSYLHSC-  195 (458)
T ss_pred             HHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHH-hhhhhhHHHHHHHHHHHHhhhhhhhcc-
Confidence            44566778999999999986543     46788999999999999987532 234467777889999999999999954 


Q ss_pred             CCCeEEccCCCCCeeEcCCCcEEEcc
Q 026214          183 PRPIVYRDFKTAHILFNEENVAKMFD  208 (241)
Q Consensus       183 ~~~ivH~dlk~~Nill~~~~~~ki~D  208 (241)
                      ..+|+|+++..+.|++..++.+||.-
T Consensus       196 ~PpiihgnlTc~tifiq~ngLIkig~  221 (458)
T KOG1266|consen  196 DPPIIHGNLTCDTIFIQHNGLIKIGS  221 (458)
T ss_pred             CCccccCCcchhheeecCCceEEecc
Confidence            67899999999999999999998763

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=98.56  E-value=3.2e-06  Score=66.79  Aligned_cols=137  Identities=17%  Similarity=0.172  Sum_probs=95.4

Q ss_pred             CcCCeeecccceEEEEEEECCeEEEEEEeeccC----------------CcchhhHHHHHHHHHhcC------CCceeeE
Q 026214           65 DQKNVITEDWGCILYKGFWQERLISVMRFRESN----------------RDGHGSCINNIVYAAQMS------HDHILKL  122 (241)
Q Consensus        65 ~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~----------------~~~~~~~~~E~~~l~~l~------h~niv~l  122 (241)
                      +....||+|+.-.||.-- ++....||+.....                .....+..+|+.....+.      +.+|.++
T Consensus         4 ~~~~~i~~G~~R~cy~HP-~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~   82 (199)
T PF10707_consen    4 SESDLIAQGGERDCYQHP-DDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRF   82 (199)
T ss_pred             CCCcccccCCCceEEECC-CCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccE
Confidence            446789999998888554 33445667665543                223466788888777776      7889999


Q ss_pred             eeEEecCCcceEEEeeCCC------CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCe
Q 026214          123 IGCCLETPIPILAFESVEY------GNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHI  196 (241)
Q Consensus       123 ~~~~~~~~~~~lv~e~~~~------gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Ni  196 (241)
                      +|+..++...-+|+|.+.+      .||.+++...      .++. .....+.++   ..||-   ...|+.+|++|.||
T Consensus        83 ~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~------~~~~-~~~~~L~~f---~~~l~---~~~Iv~~dl~~~NI  149 (199)
T PF10707_consen   83 YGFVETNLGLGLVVELIRDADGNISPTLEDYLKEG------GLTE-ELRQALDEF---KRYLL---DHHIVIRDLNPHNI  149 (199)
T ss_pred             eEEEecCCceEEEEEEEECCCCCcCccHHHHHHcC------CccH-HHHHHHHHH---HHHHH---HcCCeecCCCcccE
Confidence            9999999989999997642      3788888333      3554 333333333   44555   77899999999999


Q ss_pred             eEcCC---C-cEEEcc-ccCceec
Q 026214          197 LFNEE---N-VAKMFD-FSLSISI  215 (241)
Q Consensus       197 ll~~~---~-~~ki~D-fG~a~~~  215 (241)
                      ++...   . .+.|+| ||....+
T Consensus       150 v~~~~~~~~~~lvlIDG~G~~~~i  173 (199)
T PF10707_consen  150 VVQRRDSGEFRLVLIDGLGEKELI  173 (199)
T ss_pred             EEEecCCCceEEEEEeCCCCcccc
Confidence            99532   2 578887 7766554

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>PLN02876 acyl-CoA dehydrogenase

Probab=98.40  E-value=6.5e-06  Score=78.56  Aligned_cols=77  Identities=6%  Similarity=-0.018  Sum_probs=55.8

Q ss_pred             CCeeecccceEEEEEEECC----eEEEEEEeeccC-CcchhhHHHHHHHHHhcC-CCce--eeEeeEEecC---CcceEE
Q 026214           67 KNVITEDWGCILYKGFWQE----RLISVMRFRESN-RDGHGSCINNIVYAAQMS-HDHI--LKLIGCCLET---PIPILA  135 (241)
Q Consensus        67 ~~~lg~G~~g~Vy~~~~~~----~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~ni--v~l~~~~~~~---~~~~lv  135 (241)
                      ...++.|.+..+|.....+    ..+++|+..... ......+.+|..++..+. |+++  ++++.+|.+.   +..|+|
T Consensus        43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV  122 (822)
T PLN02876         43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI  122 (822)
T ss_pred             EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence            4567889999999987732    467777765432 123456889999999995 6665  7777777654   468999


Q ss_pred             EeeCCCCC
Q 026214          136 FESVEYGN  143 (241)
Q Consensus       136 ~e~~~~gs  143 (241)
                      |||++|..
T Consensus       123 ME~v~G~~  130 (822)
T PLN02876        123 MEYLEGRI  130 (822)
T ss_pred             EEecCCcc
Confidence            99998754

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=98.39  E-value=2.6e-06  Score=66.81  Aligned_cols=106  Identities=20%  Similarity=0.179  Sum_probs=81.9

Q ss_pred             HHHHHHHHhcCC-CceeeEeeEEecCCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCC
Q 026214          105 INNIVYAAQMSH-DHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFP  183 (241)
Q Consensus       105 ~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~  183 (241)
                      ..|.-++..+.+ +++++++|+|-    .++++||...+++......-  ......+|..+.+|+.+++..+.++++...
T Consensus         7 ~~E~lll~~l~~~~~~pk~lG~CG----~~~v~E~~~~~~~~~~~~~l--~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~   80 (188)
T PF12260_consen    7 NNEPLLLQLLQGSEPFPKLLGSCG----RFYVVEYVGAGSLYGIYRPL--SQFLQSPWEQRAKIALQLLELLEELDHGPL   80 (188)
T ss_pred             ccHHHHHHHcCCCCCCCCeeeECC----CEEEEEeecCcccccccccc--ccccccCHHHHHHHHHHHHHHHHHHhcCCC
Confidence            357888888865 69999999992    46688999876664321000  012347899999999999999999995444


Q ss_pred             CCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          184 RPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       184 ~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ..+.-.|++|+|+-+++++.+|++|...+....
T Consensus        81 ~~~~lcDv~~~nfgv~~~~~lk~iDld~v~~~~  113 (188)
T PF12260_consen   81 GFFYLCDVSPDNFGVNDDGRLKLIDLDDVFVED  113 (188)
T ss_pred             CcEEEeecchHHeEEeCCCcEEEEechhcchhH
Confidence            568889999999999999999999999776553

Proteins in this uncharacterised family are described as transmembrane proteins.

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=98.37  E-value=4.5e-06  Score=64.02  Aligned_cols=130  Identities=10%  Similarity=0.074  Sum_probs=91.6

Q ss_pred             cCCeeecccceEEEEEEECCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCcee-eEeeEEecCCcceEEEeeCCCCCH
Q 026214           66 QKNVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHIL-KLIGCCLETPIPILAFESVEYGNL  144 (241)
Q Consensus        66 ~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~l~~~~~~~~~~~lv~e~~~~gsL  144 (241)
                      ..+.|++|.+|.||+|.+.+..+|+|.-..+.  ....+..|.+++..+.-.++- +++.|..    .++.|||+.|..|
T Consensus        26 v~~~L~KG~~s~Vyl~~~~~~~~a~Kvrr~ds--~r~~l~kEakiLeil~g~~~~p~vy~yg~----~~i~me~i~G~~L   99 (201)
T COG2112          26 VEKELAKGTTSVVYLGEWRGGEVALKVRRRDS--PRRNLEKEAKILEILAGEGVTPEVYFYGE----DFIRMEYIDGRPL   99 (201)
T ss_pred             hhhhhhcccccEEEEeeccCceEEEEEecCCc--chhhHHHHHHHHHHhhhcCCCceEEEech----hhhhhhhhcCcch
Confidence            35789999999999999999999999876654  456788999999999766653 4443332    2344999998788


Q ss_pred             HHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCC-CCCeeEcCCCcEEEccccCceecC
Q 026214          145 RDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFK-TAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       145 ~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk-~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      .++...        .+...+.    .++..---|-   ..+|-|..|+ |...+|..+..+.|+||..|+.-.
T Consensus       100 ~~~~~~--------~~rk~l~----~vlE~a~~LD---~~GI~H~El~~~~k~vlv~~~~~~iIDFd~At~k~  157 (201)
T COG2112         100 GKLEIG--------GDRKHLL----RVLEKAYKLD---RLGIEHGELSRPWKNVLVNDRDVYIIDFDSATFKK  157 (201)
T ss_pred             hhhhhc--------ccHHHHH----HHHHHHHHHH---HhccchhhhcCCceeEEecCCcEEEEEccchhhcc
Confidence            877622        1233333    3334422344   7788888885 556666666699999999998443

>PRK10593 hypothetical protein; Provisional

Probab=98.14  E-value=6.4e-05  Score=63.30  Aligned_cols=77  Identities=10%  Similarity=0.037  Sum_probs=56.3

Q ss_pred             cCCeeecccceEEEEEEECCeEEEEEEeeccCCcchhhHHHHHHHHHhcCC---CceeeEeeEEec---CCcceEEEeeC
Q 026214           66 QKNVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQMSH---DHILKLIGCCLE---TPIPILAFESV  139 (241)
Q Consensus        66 ~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~l~~~~~~---~~~~~lv~e~~  139 (241)
                      ..+.||.|..+.||.....+..+.+|..+...  ....+..|...++.|.-   ..++++++++..   .+..++|||++
T Consensus        18 ~~~~i~~G~~~~vy~~~~~~~~~~~k~~~~~~--~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~i   95 (297)
T PRK10593         18 RVECISEQPYAALWALYDSQGNPMPLMARSFS--TPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLERL   95 (297)
T ss_pred             eeeecCCccceeEEEEEcCCCCEEEEEecccc--cchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEecc
Confidence            34679999999999998744466777643311  23568899999988843   467888887754   36689999999


Q ss_pred             CCCCH
Q 026214          140 EYGNL  144 (241)
Q Consensus       140 ~~gsL  144 (241)
                      ++.++
T Consensus        96 ~G~~~  100 (297)
T PRK10593         96 RGVSV  100 (297)
T ss_pred             CCEec
Confidence            97654

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=98.09  E-value=4.3e-05  Score=61.97  Aligned_cols=73  Identities=10%  Similarity=0.036  Sum_probs=44.0

Q ss_pred             Ceeecccce-EEEEEEECCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCC---ceeeEeeEEecC---CcceEEEeeCC
Q 026214           68 NVITEDWGC-ILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQMSHD---HILKLIGCCLET---PIPILAFESVE  140 (241)
Q Consensus        68 ~~lg~G~~g-~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~---~~~~lv~e~~~  140 (241)
                      +.|+.|+.. .||+.   +..+++|..+..  .....+.+|..++..+...   .+..+++.....   ...+++|++++
T Consensus         3 ~~~~~gG~~n~vy~~---~~~~VlR~~~~~--~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i~   77 (235)
T cd05155           3 EPVDSGGTDNATFRL---GDDMSVRLPSAA--GYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWLE   77 (235)
T ss_pred             eeccCCCcccceEEc---CCceEEEcCCcc--chHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEeec
Confidence            356656554 58875   234666754432  2345688899999888532   344545444332   24588999998


Q ss_pred             CCCHH
Q 026214          141 YGNLR  145 (241)
Q Consensus       141 ~gsL~  145 (241)
                      |.++.
T Consensus        78 G~~l~   82 (235)
T cd05155          78 GETAT   82 (235)
T ss_pred             CCCCC
Confidence            86653

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=98.08  E-value=0.00011  Score=64.16  Aligned_cols=73  Identities=7%  Similarity=-0.040  Sum_probs=51.7

Q ss_pred             CeeecccceEEEEEEE-CC-eEEEEEEeecc----C---CcchhhHHHHHHHHHhcC---CCceeeEeeEEecCCcceEE
Q 026214           68 NVITEDWGCILYKGFW-QE-RLISVMRFRES----N---RDGHGSCINNIVYAAQMS---HDHILKLIGCCLETPIPILA  135 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~-~~-~~vavK~~~~~----~---~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv  135 (241)
                      +.||.|.+..||++.. ++ +.|+||.-.+.    .   +....++..|.+.|..+.   ..++++++.+  +.+..++|
T Consensus        32 ~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~lV  109 (401)
T PRK09550         32 REIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVTV  109 (401)
T ss_pred             eEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEEE
Confidence            5789999999999999 44 48999975421    1   123456777888887762   3456677655  44667899


Q ss_pred             EeeCCCC
Q 026214          136 FESVEYG  142 (241)
Q Consensus       136 ~e~~~~g  142 (241)
                      ||++++.
T Consensus       110 ME~L~~~  116 (401)
T PRK09550        110 MEDLSDH  116 (401)
T ss_pred             EecCCCc
Confidence            9999753

>TIGR02721 ycfN_thiK thiamine kinase

Probab=98.04  E-value=5.4e-05  Score=62.20  Aligned_cols=140  Identities=11%  Similarity=-0.022  Sum_probs=78.7

Q ss_pred             eecccceEEEEEEECCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCce-eeEeeEEecCCcceEEEeeCCCCCHHH--
Q 026214           70 ITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHI-LKLIGCCLETPIPILAFESVEYGNLRD--  146 (241)
Q Consensus        70 lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~~~gsL~~--  146 (241)
                      +..|-...+|+...++..+++|..........-...+|..++..+....+ +++++..  .  .++|+||++|.++..  
T Consensus         4 ~~~G~tn~~y~~~~~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~--~--~~~v~e~i~G~~~~~~~   79 (256)
T TIGR02721         4 LSGGLTNRSWRIEHPGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVN--E--HWLLVEWLEGEVITLDQ   79 (256)
T ss_pred             CCCcCcCCeEEEEeCCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEe--C--CEEEEEeccCccccccc
Confidence            45677788998887777888887544322211235778888888854333 3444332  2  368999998765432  


Q ss_pred             ------------HH---hhcCCCCCCCCCHH-HHHHHHHHH---------HHHHHHHh-C----CCCCCeEEccCCCCCe
Q 026214          147 ------------RI---LSASQPQTEPLLMK-HRLKIAMDI---------AHALAYLH-F----GFPRPIVYRDFKTAHI  196 (241)
Q Consensus       147 ------------~l---~~~~~~~~~~l~~~-~~~~i~~~i---------~~~l~~lH-~----~~~~~ivH~dlk~~Ni  196 (241)
                                  .+   +.... ...+++.. .+..+..++         ...+..+- .    .....++|+|+.|.||
T Consensus        80 ~~~~~~~~~la~~l~~lH~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~Ni  158 (256)
T TIGR02721        80 FVALDLLLELAALLHQLHSQPR-FGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAYNL  158 (256)
T ss_pred             ccCchhHHHHHHHHHHHhCCCC-CCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcCcE
Confidence                        11   11110 11112221 111211111         11111111 0    1123689999999999


Q ss_pred             eEcCCCcEEEccccCceec
Q 026214          197 LFNEENVAKMFDFSLSISI  215 (241)
Q Consensus       197 ll~~~~~~ki~DfG~a~~~  215 (241)
                      +++.++ +.++||+.|..-
T Consensus       159 l~~~~~-~~lIDwE~a~~g  176 (256)
T TIGR02721       159 VVTPQG-LKLIDWEYASDG  176 (256)
T ss_pred             EEeCCC-CEEEeccccCcC
Confidence            998877 789999987643

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=98.02  E-value=6.7e-05  Score=62.89  Aligned_cols=145  Identities=14%  Similarity=0.112  Sum_probs=83.7

Q ss_pred             CCeeecccceEEEEEEECCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCc--eeeEeeE------EecCCcceEEEee
Q 026214           67 KNVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQMSHDH--ILKLIGC------CLETPIPILAFES  138 (241)
Q Consensus        67 ~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~------~~~~~~~~lv~e~  138 (241)
                      .+.|..|....+|+...++..+++|.....   .......|+.++..+.+.+  +++++..      ....+..++++++
T Consensus        19 i~~i~~G~~n~~y~v~~~~~~~vLr~~~~~---~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~~   95 (296)
T cd05153          19 FEGISAGIENTNYFVTTDSGRYVLTLFEKV---SAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVEF   95 (296)
T ss_pred             eecccCccccceEEEEeCCCcEEEEEcCCC---ChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEEe
Confidence            345677777789998776668899987642   2345667788777774332  4444331      1224456889999


Q ss_pred             CCCCCHHH-----------H---HhhcCCC-C-----CCCCCHHHHH----------HHHHHHHHHHHHHhC----CCCC
Q 026214          139 VEYGNLRD-----------R---ILSASQP-Q-----TEPLLMKHRL----------KIAMDIAHALAYLHF----GFPR  184 (241)
Q Consensus       139 ~~~gsL~~-----------~---l~~~~~~-~-----~~~l~~~~~~----------~i~~~i~~~l~~lH~----~~~~  184 (241)
                      ++|.++..           .   ++..... .     .....|....          .....+..++.++..    ....
T Consensus        96 i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~  175 (296)
T cd05153          96 LAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDLPR  175 (296)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcCCC
Confidence            98765421           1   1111000 0     0111111110          011112233444431    1235


Q ss_pred             CeEEccCCCCCeeEcCCCcEEEccccCcee
Q 026214          185 PIVYRDFKTAHILFNEENVAKMFDFSLSIS  214 (241)
Q Consensus       185 ~ivH~dlk~~Nill~~~~~~ki~DfG~a~~  214 (241)
                      +++|+|+.|.|||++.++.+.|+||+.+..
T Consensus       176 ~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~  205 (296)
T cd05153         176 GVIHADLFRDNVLFDGDELSGVIDFYFACT  205 (296)
T ss_pred             cCCccCcCcccEEEeCCceEEEeehhhhcC
Confidence            799999999999999887788999998753

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=98.01  E-value=0.00012  Score=57.77  Aligned_cols=125  Identities=20%  Similarity=0.174  Sum_probs=88.9

Q ss_pred             cCCCcCCeeecccc-eEEEEEEECCeEEEEEEeecc---CC------------------cchhhHHHHHHHHHhcC---C
Q 026214           62 NNYDQKNVITEDWG-CILYKGFWQERLISVMRFRES---NR------------------DGHGSCINNIVYAAQMS---H  116 (241)
Q Consensus        62 ~~~~~~~~lg~G~~-g~Vy~~~~~~~~vavK~~~~~---~~------------------~~~~~~~~E~~~l~~l~---h  116 (241)
                      ..+...+.||.|.- |.||++..+|..+|+|.+...   ..                  .....|..|-+...+|+   +
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~~  116 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEIDGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAGR  116 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEECCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhccc
Confidence            67788899999999 999999999999999994321   00                  01234788888888884   4


Q ss_pred             Cce--eeEeeEEecCC------------------cceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHH
Q 026214          117 DHI--LKLIGCCLETP------------------IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALA  176 (241)
Q Consensus       117 ~ni--v~l~~~~~~~~------------------~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~  176 (241)
                      .++  |+++||..-..                  ...+|.||.+...              .+.    ..-+.+|.+-|.
T Consensus       117 e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~--------------~~~----~~~~~~~~~dl~  178 (207)
T PF13095_consen  117 EGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP--------------PLQ----IRDIPQMLRDLK  178 (207)
T ss_pred             cCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc--------------ccc----hhHHHHHHHHHH
Confidence            455  89999883221                  1244556554321              122    234556777788


Q ss_pred             HHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCc
Q 026214          177 YLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS  212 (241)
Q Consensus       177 ~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a  212 (241)
                      .+|   ..+|+-+|+++.|..     .-+|+|||.+
T Consensus       179 ~~~---k~gI~~~Dv~~~ny~-----~G~lvDfs~~  206 (207)
T PF13095_consen  179 ILH---KLGIVPRDVKPRNYR-----GGKLVDFSSS  206 (207)
T ss_pred             HHH---HCCeeeccCcccccc-----CCEEEecccC
Confidence            999   999999999999986     4578899865

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=97.93  E-value=0.00027  Score=57.16  Aligned_cols=143  Identities=18%  Similarity=0.101  Sum_probs=80.1

Q ss_pred             CeeecccceEEEEEEEC---CeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCce-eeEeeEEecCCcceEEEeeCCCCC
Q 026214           68 NVITEDWGCILYKGFWQ---ERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHI-LKLIGCCLETPIPILAFESVEYGN  143 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~~---~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~~~gs  143 (241)
                      +.|..|-...+|+....   +..+++|....... ..-...+|+.++..+...++ +++++...    ..++|||++|.+
T Consensus         4 ~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~-~~~d~~~E~~~~~~l~~~gl~P~v~~~~~----~~~l~e~i~G~~   78 (235)
T cd05157           4 KRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTE-LIIDRERELRIHKLLSKHGLAPKLYATFQ----NGLIYEFIPGRT   78 (235)
T ss_pred             EEcCCcccceEEEEEcCCCCCCeEEEEEccCCcc-ceecHHHHHHHHHHHHhCCCCCeEEEEeC----CcEEEEeeCCCc
Confidence            45667777899998863   57888887654322 22233578888888854333 34443322    237999998866


Q ss_pred             HHHH----------H-------hhcCCCCC------CCC-CHHHHHHHHH-------------------------HHHHH
Q 026214          144 LRDR----------I-------LSASQPQT------EPL-LMKHRLKIAM-------------------------DIAHA  174 (241)
Q Consensus       144 L~~~----------l-------~~~~~~~~------~~l-~~~~~~~i~~-------------------------~i~~~  174 (241)
                      +...          +       +.......      ... .+..+..+..                         +.+..
T Consensus        79 l~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  158 (235)
T cd05157          79 LEPEDLRNPKIYRLIARELAKLHSIKPPEAISSPGTPKPILWPTIRKWINLVPTEFKKPEKFQKKTKAISFEQLRDEISW  158 (235)
T ss_pred             CCHHHccChHHHHHHHHHHHHHhcccccccccccCCCCCcHHHHHHHHHHHhHHhhccccchhhhhccccHHHHHHHHHH
Confidence            5321          1       11100000      011 1222222211                         11111


Q ss_pred             HHH-HhC-CCCCCeEEccCCCCCeeEcC-CCcEEEccccCceec
Q 026214          175 LAY-LHF-GFPRPIVYRDFKTAHILFNE-ENVAKMFDFSLSISI  215 (241)
Q Consensus       175 l~~-lH~-~~~~~ivH~dlk~~Nill~~-~~~~ki~DfG~a~~~  215 (241)
                      |.. +-. .....++|+|+.+.|||++. ++.+.++||..|..-
T Consensus       159 l~~~l~~~~~~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~~  202 (235)
T cd05157         159 LKELLSALNSPIVFCHNDLLSGNIIYNEEKNSVKFIDYEYAGYN  202 (235)
T ss_pred             HHHHhcccCCCEEEEcCCCCcCcEEEeCCCCCEEEEEcccCCcC
Confidence            111 111 11356899999999999997 578999999988643

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>PRK05231 homoserine kinase; Provisional

Probab=97.84  E-value=0.00098  Score=56.52  Aligned_cols=159  Identities=14%  Similarity=0.097  Sum_probs=82.4

Q ss_pred             cCHHHHHHHhcCCCc-----CCeeecccceEEEEEEECCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCc--eeeEee
Q 026214           52 FSAQELKLATNNYDQ-----KNVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQMSHDH--ILKLIG  124 (241)
Q Consensus        52 ~~~~~~~~~~~~~~~-----~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~  124 (241)
                      ++..++......|..     .+.|+.|....+|....++..+++|++...   .......|+.++..|...+  +++++.
T Consensus         7 ls~~~l~~~l~~y~~~~~~~~~~l~~G~~n~~y~v~t~~g~~vLK~~~~~---~~~~l~~~~~~l~~L~~~glpvP~~i~   83 (319)
T PRK05231          7 VSDDELAAFLAPYDLGELLSLKGIAEGIENSNFFLTTTQGEYVLTLFERL---TAEDLPFFLGLMQHLAARGVPVPAPVA   83 (319)
T ss_pred             CCHHHHHHHHHhcCCchhhccchhccccccceEEEEeCCCcEEEEEeccC---ChHHhHHHHHHHHHHHHCCCCCCccee
Confidence            344444444344533     245666777789998875557889987621   2233444555555553212  333332


Q ss_pred             ------EEecCCcceEEEeeCCCCCHH-----------HHHh---hcCCC------CCCCCCH-HHHHH-----------
Q 026214          125 ------CCLETPIPILAFESVEYGNLR-----------DRIL---SASQP------QTEPLLM-KHRLK-----------  166 (241)
Q Consensus       125 ------~~~~~~~~~lv~e~~~~gsL~-----------~~l~---~~~~~------~~~~l~~-~~~~~-----------  166 (241)
                            +....+..+++++|++|..+.           +.+.   .....      ....+.+ .....           
T Consensus        84 ~~~G~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (319)
T PRK05231         84 RRDGAALGELAGKPAAIVTFLEGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADEQA  163 (319)
T ss_pred             CCCCCEeeeeCCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChhHH
Confidence                  112245678999999875431           1111   11000      0001111 11111           


Q ss_pred             -HHHHHH-HHHHHHhCC----CCCCeEEccCCCCCeeEcCCCcEEEccccCce
Q 026214          167 -IAMDIA-HALAYLHFG----FPRPIVYRDFKTAHILFNEENVAKMFDFSLSI  213 (241)
Q Consensus       167 -i~~~i~-~~l~~lH~~----~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~  213 (241)
                       .+.+.+ ..+..+...    -..+++|+|+.|.||+++.+...-|+||+.+.
T Consensus       164 ~~l~~~~~~~~~~~~~~~~~~lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~  216 (319)
T PRK05231        164 ALLEAELAAQLAFLASAAWPALPRGVIHADLFRDNVLFEGDRLSGFIDFYFAC  216 (319)
T ss_pred             HHHHHHHHHHHHhhhccccccCCcccCCCCCCCCcEEEECCceEEEEeccccc
Confidence             111111 111222210    24579999999999999876666899999875

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=97.72  E-value=0.0017  Score=54.80  Aligned_cols=144  Identities=13%  Similarity=0.108  Sum_probs=80.5

Q ss_pred             CeeecccceEEEEEEECCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCc--eeeEeeEE------ecCCcceEEEeeC
Q 026214           68 NVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQMSHDH--ILKLIGCC------LETPIPILAFESV  139 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~------~~~~~~~lv~e~~  139 (241)
                      ..++.|....+|+...++..+++|......  .......|+.++..|...+  +++++...      ...+..+++++|+
T Consensus        28 ~~~~~G~~n~~y~v~t~~~~~vLK~~~~~~--~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~e~i  105 (307)
T TIGR00938        28 KGIAEGVENSNYLLTTDVGRYILTLYEKRV--KAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLVEFL  105 (307)
T ss_pred             cccCCccccceEEEEeCCCcEEEEEecCCC--CHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEEEeC
Confidence            456677667899887755578888765432  2344556777777774222  34443321      1235678999999


Q ss_pred             CCCCHH-----------HH---HhhcCCC---CC-C---CCCHHHHHH------------HHHHHHHHHHHHhC----CC
Q 026214          140 EYGNLR-----------DR---ILSASQP---QT-E---PLLMKHRLK------------IAMDIAHALAYLHF----GF  182 (241)
Q Consensus       140 ~~gsL~-----------~~---l~~~~~~---~~-~---~l~~~~~~~------------i~~~i~~~l~~lH~----~~  182 (241)
                      +|.++.           ..   ++.....   .. .   .-.|.....            ....+...+.++..    ..
T Consensus       106 ~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~  185 (307)
T TIGR00938       106 QGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKFWPRDL  185 (307)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhhhhhcC
Confidence            874421           11   1111000   00 0   011111100            01112334444431    12


Q ss_pred             CCCeEEccCCCCCeeEcCCCcEEEccccCce
Q 026214          183 PRPIVYRDFKTAHILFNEENVAKMFDFSLSI  213 (241)
Q Consensus       183 ~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~  213 (241)
                      ..+++|+|+.+.||+++.++.+.|+||+.+.
T Consensus       186 ~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~  216 (307)
T TIGR00938       186 PRGVIHADLFPDNVLFDGDSVKGVIDFYFAC  216 (307)
T ss_pred             CCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence            4689999999999999988877899999884

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=97.56  E-value=0.0011  Score=56.18  Aligned_cols=140  Identities=12%  Similarity=0.099  Sum_probs=77.4

Q ss_pred             EEEEEEECCeEEEEEEeec--cCCcchhhHHHHHHHHHhcCC--CceeeEeeEEecCC--cceEEEeeCCCCC-------
Q 026214           77 ILYKGFWQERLISVMRFRE--SNRDGHGSCINNIVYAAQMSH--DHILKLIGCCLETP--IPILAFESVEYGN-------  143 (241)
Q Consensus        77 ~Vy~~~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~--~~~lv~e~~~~gs-------  143 (241)
                      .+|....++++++++ .+.  ..........+|..+++.+.-  .-+...+++|..+.  .+|.||+|+.|..       
T Consensus        40 ~t~~~~~~~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~~~veGe~~~~~~~~  118 (321)
T COG3173          40 DTFRLGDTGQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVMEWVEGEVVWSALPP  118 (321)
T ss_pred             ceEEEecCCceEEEe-cCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEEEEecceeccCcCCc
Confidence            344444467778888 442  222344556778888877743  23445566776554  7899999998621       


Q ss_pred             -----------HHHHHhhcC------CCCCC---CCCHHHHHHHHHH--------------HHHHHHHHhC-----CCCC
Q 026214          144 -----------LRDRILSAS------QPQTE---PLLMKHRLKIAMD--------------IAHALAYLHF-----GFPR  184 (241)
Q Consensus       144 -----------L~~~l~~~~------~~~~~---~l~~~~~~~i~~~--------------i~~~l~~lH~-----~~~~  184 (241)
                                 |.+.|..-.      ....+   ......+..+..+              ...-..|++.     ....
T Consensus       119 ~~~~~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~~~~~~Wl~~~~p~~~~~~  198 (321)
T COG3173         119 ESLGRQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLADRLIKWLEANRPPWAGPP  198 (321)
T ss_pred             ccchHHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchHHHHHHHHHhcCCCcCCCc
Confidence                       111221100      00000   0001111111111              1122334432     1134


Q ss_pred             CeEEccCCCCCeeEcCCCcEEEccccCceecCC
Q 026214          185 PIVYRDFKTAHILFNEENVAKMFDFSLSISIPE  217 (241)
Q Consensus       185 ~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~  217 (241)
                      .++|+|+.+.|++++.+.-+=|.||+++..-++
T Consensus       199 ~lvHGD~~~gNlii~~~~~~gVlDwe~~~lGDP  231 (321)
T COG3173         199 VLVHGDYRPGNLIIDPGRPTGVLDWELATLGDP  231 (321)
T ss_pred             eeeeCCcccCCEEEeCCCeeEEEeccccccCCc
Confidence            689999999999999988899999999876544

>PLN02756 S-methyl-5-thioribose kinase

Probab=97.56  E-value=0.0024  Score=55.84  Aligned_cols=73  Identities=5%  Similarity=-0.026  Sum_probs=50.6

Q ss_pred             CCeeecccceEEEEEEECCeEEEEEEeecc----CC---cchhhHHHHHHHHHhcC---CCceeeEeeEEecCCcceEEE
Q 026214           67 KNVITEDWGCILYKGFWQERLISVMRFRES----NR---DGHGSCINNIVYAAQMS---HDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        67 ~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~----~~---~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv~  136 (241)
                      .+.||.|....||+....+..++||+-...    ..   ....+-..|...|..+.   ..++++++.++.  +..+++|
T Consensus        37 ~~eiggGn~N~VyrV~~~~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de--d~~vlvM  114 (418)
T PLN02756         37 IKEVGDGNLNFVYIVVSSSGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDR--TMALIGM  114 (418)
T ss_pred             EEEcCCCceeeEEEEEcCCccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECC--CCCEEEE
Confidence            457899999999999886677999975521    11   13344555677676653   247778887776  4567889


Q ss_pred             eeCCC
Q 026214          137 ESVEY  141 (241)
Q Consensus       137 e~~~~  141 (241)
                      |++++
T Consensus       115 E~L~~  119 (418)
T PLN02756        115 RYLEP  119 (418)
T ss_pred             eecCC
Confidence            99975

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=97.55  E-value=6.5e-06  Score=77.68  Aligned_cols=146  Identities=10%  Similarity=0.015  Sum_probs=102.0

Q ss_pred             HhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceE
Q 026214           60 ATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPIL  134 (241)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  134 (241)
                      ..+.|.+.+-+-+|.++.+..+.-  .+...+++......   ....+....+-.++-...+|-++...--+......+|
T Consensus       802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L  881 (1205)
T KOG0606|consen  802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL  881 (1205)
T ss_pred             CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence            445566667788899988887765  34333333322211   1122333333333434456777766555556678899


Q ss_pred             EEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCce
Q 026214          135 AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSI  213 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~  213 (241)
                      +++|+.+++|...++..     ++.+..-...+...++.++.|||   ...+.|+|++|.|+++...+..+++|||...
T Consensus       882 ~~~~~~~~~~~Skl~~~-----~~~saepaRs~i~~~vqs~e~L~---s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~  952 (1205)
T KOG0606|consen  882 VGHYLNGGDLPSKLHNS-----GCLSAEPARSPILERVQSLESLH---SSLRKHRDLKPDSLLIAYDGHRPLTDFGTLS  952 (1205)
T ss_pred             hhHHhccCCchhhhhcC-----CCcccccccchhHHHHhhhhccc---cchhhcccccccchhhcccCCcccCcccccc
Confidence            99999999999999664     24555555667788999999999   8889999999999999999999999998443

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=97.46  E-value=0.00017  Score=60.66  Aligned_cols=134  Identities=13%  Similarity=0.060  Sum_probs=90.8

Q ss_pred             CCcCCeeecccceEEEEEEE-CCeEEEEEEeeccCC------------------cc----hhhHHHHHHHHHhcC-CC-c
Q 026214           64 YDQKNVITEDWGCILYKGFW-QERLISVMRFRESNR------------------DG----HGSCINNIVYAAQMS-HD-H  118 (241)
Q Consensus        64 ~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~------------------~~----~~~~~~E~~~l~~l~-h~-n  118 (241)
                      +..++.||-|--+-||.+-+ .|.+.++|.......                  .+    .-...+|+..|+.|. |- -
T Consensus        94 ~svGnqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gfp  173 (465)
T KOG2268|consen   94 ESVGNQIGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGFP  173 (465)
T ss_pred             hhhccccccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCCC
Confidence            46789999999999999999 788888885322110                  01    123567888888884 32 2


Q ss_pred             eeeEeeEEecCCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeE
Q 026214          119 ILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILF  198 (241)
Q Consensus       119 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill  198 (241)
                      +++.+++    +..++|||++.+-.|...-+        ..+++++   ...+..-+.-|-   ..|+||+|..--||++
T Consensus       174 VPkpiD~----~RH~Vvmelv~g~Pl~~v~~--------v~d~~~l---y~~lm~~Iv~la---~~GlIHgDFNEFNimv  235 (465)
T KOG2268|consen  174 VPKPIDH----NRHCVVMELVDGYPLRQVRH--------VEDPPTL---YDDLMGLIVRLA---NHGLIHGDFNEFNIMV  235 (465)
T ss_pred             CCCcccc----cceeeHHHhhcccceeeeee--------cCChHHH---HHHHHHHHHHHH---HcCceecccchheeEE
Confidence            4444443    35678899988766654431        2233333   333333344555   7899999999999999


Q ss_pred             cCCCcEEEccccCceec
Q 026214          199 NEENVAKMFDFSLSISI  215 (241)
Q Consensus       199 ~~~~~~ki~DfG~a~~~  215 (241)
                      ++++.++++||=-....
T Consensus       236 ~dd~~i~vIDFPQmvS~  252 (465)
T KOG2268|consen  236 KDDDKIVVIDFPQMVST  252 (465)
T ss_pred             ecCCCEEEeechHhhcc
Confidence            99999999999655443

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=97.46  E-value=0.0034  Score=53.99  Aligned_cols=71  Identities=8%  Similarity=0.004  Sum_probs=46.8

Q ss_pred             eeecccceEEEEEEEC-C-eEEEEEEeec-------cCCcchhhHHHHHHHHHhcC--CC-ceeeEeeEEecCCcceEEE
Q 026214           69 VITEDWGCILYKGFWQ-E-RLISVMRFRE-------SNRDGHGSCINNIVYAAQMS--HD-HILKLIGCCLETPIPILAF  136 (241)
Q Consensus        69 ~lg~G~~g~Vy~~~~~-~-~~vavK~~~~-------~~~~~~~~~~~E~~~l~~l~--h~-niv~l~~~~~~~~~~~lv~  136 (241)
                      .||.|....||++... + +.|+||.-.+       .-+....+...|...|....  -| .+++++  +.+++...++|
T Consensus         2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy--~~D~e~~~~vM   79 (370)
T TIGR01767         2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIF--HFDTEMAVTVM   79 (370)
T ss_pred             cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEE--EEccccceehH
Confidence            5799999999999983 3 6899996432       11223455667777776662  34 344444  34556667899


Q ss_pred             eeCCC
Q 026214          137 ESVEY  141 (241)
Q Consensus       137 e~~~~  141 (241)
                      |+++.
T Consensus        80 EdL~~   84 (370)
T TIGR01767        80 EDLSH   84 (370)
T ss_pred             hhCcc
Confidence            99854

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]

Probab=97.36  E-value=0.0018  Score=55.67  Aligned_cols=143  Identities=10%  Similarity=0.083  Sum_probs=96.9

Q ss_pred             CcCCeeecccceEEEEEEE-CCeEEEEEEeeccCC---------------------cch-----hhHHHHHHHHHhcCCC
Q 026214           65 DQKNVITEDWGCILYKGFW-QERLISVMRFRESNR---------------------DGH-----GSCINNIVYAAQMSHD  117 (241)
Q Consensus        65 ~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~---------------------~~~-----~~~~~E~~~l~~l~h~  117 (241)
                      .+..+|..|--+.||.++. +|..+|||+++..-.                     .+.     -....|++.|.+|+..
T Consensus       147 ~inGCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~a  226 (520)
T KOG2270|consen  147 EINGCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNA  226 (520)
T ss_pred             ecccccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhc
Confidence            4567889999999999998 888999998754210                     011     1246688899999876


Q ss_pred             ceeeEeeEEecCCcceEEEeeCCCCCH-HHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCe
Q 026214          118 HILKLIGCCLETPIPILAFESVEYGNL-RDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHI  196 (241)
Q Consensus       118 niv~l~~~~~~~~~~~lv~e~~~~gsL-~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Ni  196 (241)
                      .|+-.--+..  ....|||+|+..... .-.|      ...+++...+..+-.+++.-|.-|-.  ..++||.||+--|+
T Consensus       227 GIP~PePIlL--k~hVLVM~FlGrdgw~aPkL------Kd~~ls~~ka~~~Y~~~v~~MR~lY~--~c~LVHADLSEfN~  296 (520)
T KOG2270|consen  227 GIPCPEPILL--KNHVLVMEFLGRDGWAAPKL------KDASLSTSKARELYQQCVRIMRRLYQ--KCRLVHADLSEFNL  296 (520)
T ss_pred             CCCCCCceee--ecceEeeeeccCCCCcCccc------ccccCChHHHHHHHHHHHHHHHHHHH--Hhceeccchhhhhh
Confidence            6543222222  234689999853211 1112      23446666777777777777776653  56899999999999


Q ss_pred             eEcCCCcEEEccccCceecCCC
Q 026214          197 LFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       197 ll~~~~~~ki~DfG~a~~~~~~  218 (241)
                      |. .+|.+.|+|.+-+.....+
T Consensus       297 Ly-hdG~lyiIDVSQSVE~DHP  317 (520)
T KOG2270|consen  297 LY-HDGKLYIIDVSQSVEHDHP  317 (520)
T ss_pred             eE-ECCEEEEEEccccccCCCh
Confidence            98 5578999998877655444

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=97.35  E-value=0.0044  Score=52.11  Aligned_cols=143  Identities=19%  Similarity=0.115  Sum_probs=81.1

Q ss_pred             eeecccceEEEEEEEC--------CeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCce-eeEeeEEecCCcceEEEeeC
Q 026214           69 VITEDWGCILYKGFWQ--------ERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHI-LKLIGCCLETPIPILAFESV  139 (241)
Q Consensus        69 ~lg~G~~g~Vy~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~  139 (241)
                      .+..|-...+|+....        +..+++|...... .......+|..++..+...++ +++++++. +   .+|+||+
T Consensus         5 ~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~-~---~~v~e~i   79 (302)
T cd05156           5 KISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSV-ELLIDRERELVVFARLSERNLGPKLYGIFP-N---GRIEEFI   79 (302)
T ss_pred             EecCcccceeEEEEcCCcccccCCCCeEEEEEecCCC-cceechHHHHHHHHHHHhCCCCCceEEEeC-C---Cchhhee
Confidence            4555666788988763        4788888865543 233445778888888853333 34454443 2   3578998


Q ss_pred             CCCCHHHH--------------H---hhcCCCC-C---CCCC--HHHHHHH--------------------------HHH
Q 026214          140 EYGNLRDR--------------I---LSASQPQ-T---EPLL--MKHRLKI--------------------------AMD  170 (241)
Q Consensus       140 ~~gsL~~~--------------l---~~~~~~~-~---~~l~--~~~~~~i--------------------------~~~  170 (241)
                      +|.++...              +   +...... .   ...+  +..+..+                          ...
T Consensus        80 ~G~~l~~~~~~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (302)
T cd05156          80 PSRTLTTEELRDPDISAEIARRMAKLHSIVVPLSPEERDLTPAIWKLLKQWLDLAETVIEIVDSDSEKLLEVELSLFLED  159 (302)
T ss_pred             CCCcCCHhHcCCcHHHHHHHHHHHHhhCCCCCCCCCcCcccchHHHHHHHHHHHhhhhhhhcccchhhhhhhhHHHHHHH
Confidence            87665431              1   1110000 0   0111  1111111                          112


Q ss_pred             HHHHHHHHhC------CCCCCeEEccCCCCCeeEcCC----CcEEEccccCceecC
Q 026214          171 IAHALAYLHF------GFPRPIVYRDFKTAHILFNEE----NVAKMFDFSLSISIP  216 (241)
Q Consensus       171 i~~~l~~lH~------~~~~~ivH~dlk~~Nill~~~----~~~ki~DfG~a~~~~  216 (241)
                      +..-+.++-.      .....++|+|+.|.|||++.+    +.+.++||..|..-.
T Consensus       160 ~~~~~~~l~~~~~~~~~~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~~~  215 (302)
T cd05156         160 EAKYLRFLLESTSEESGSPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASYNY  215 (302)
T ss_pred             HHHHHHHHHhhccCCCCCCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCCCC
Confidence            2222333431      135678999999999999874    889999999886543

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>PLN02236 choline kinase

Probab=97.27  E-value=0.0042  Score=53.43  Aligned_cols=144  Identities=15%  Similarity=0.104  Sum_probs=81.2

Q ss_pred             CeeecccceEEEEEEE-C-----CeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCcee-eEeeEEecCCcceEEEeeCC
Q 026214           68 NVITEDWGCILYKGFW-Q-----ERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHIL-KLIGCCLETPIPILAFESVE  140 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~-~-----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~l~~~~~~~~~~~lv~e~~~  140 (241)
                      ..|..|-.-.+|++.. +     +..|++|........... -.+|..++..+..-++. ++++.+.. +   .+.+|++
T Consensus        42 ~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~id-R~~E~~~~~~l~~~gl~P~~~~~~~~-g---~v~efi~  116 (344)
T PLN02236         42 IPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFD-RDDEIRTFECMSRHGQGPRLLGRFPN-G---RVEEFIH  116 (344)
T ss_pred             EEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeec-hHHHHHHHHHHHHcCCCCceEEEECC-c---eEEEeeC
Confidence            3455566778899875 2     257888877654422222 36788888888544443 44555432 2   5789987


Q ss_pred             CCCHHHH-----------------HhhcCCC-CCCCCCHHHHHHHHHHH-----------------HHHHHHH----hC-
Q 026214          141 YGNLRDR-----------------ILSASQP-QTEPLLMKHRLKIAMDI-----------------AHALAYL----HF-  180 (241)
Q Consensus       141 ~gsL~~~-----------------l~~~~~~-~~~~l~~~~~~~i~~~i-----------------~~~l~~l----H~-  180 (241)
                      +.+|...                 ++...-. ...+..+..+..+..++                 ...+..|    .. 
T Consensus       117 g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~~  196 (344)
T PLN02236        117 ARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSGD  196 (344)
T ss_pred             CCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhccc
Confidence            7665421                 1111000 01112233333332211                 1112222    11 


Q ss_pred             CCCCCeEEccCCCCCeeEcC-CCcEEEccccCceecC
Q 026214          181 GFPRPIVYRDFKTAHILFNE-ENVAKMFDFSLSISIP  216 (241)
Q Consensus       181 ~~~~~ivH~dlk~~Nill~~-~~~~ki~DfG~a~~~~  216 (241)
                      .....++|+|+++.|||+++ ++.+.++||..|..-.
T Consensus       197 ~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~~~  233 (344)
T PLN02236        197 DQEIGFCHNDLQYGNIMIDEETRAITIIDYEYASYNP  233 (344)
T ss_pred             CCCceEEeCCCCcCcEEEeCCCCcEEEEeehhccccc
Confidence            22457899999999999986 4689999999887544

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=97.17  E-value=0.0052  Score=51.17  Aligned_cols=34  Identities=21%  Similarity=0.316  Sum_probs=27.2

Q ss_pred             CCCeEEccCCCCCeeEcCCCc-EEEccccCceecC
Q 026214          183 PRPIVYRDFKTAHILFNEENV-AKMFDFSLSISIP  216 (241)
Q Consensus       183 ~~~ivH~dlk~~Nill~~~~~-~ki~DfG~a~~~~  216 (241)
                      ...++|+|+.|.|||++.++. .-|+||+.+..-+
T Consensus       184 ~~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~iGD  218 (276)
T cd05152         184 HTVLVHGDLHPGHILIDEDARVTGLIDWTEAKVGD  218 (276)
T ss_pred             CCeeEeCCCCCCcEEEeCCCCEEEEECcHhcccCC
Confidence            345899999999999987554 5699999887543

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=97.10  E-value=0.0053  Score=51.43  Aligned_cols=73  Identities=15%  Similarity=-0.042  Sum_probs=48.3

Q ss_pred             CCeeecccceEEEEEEECCeEEEEEEeeccCCcchhhHHHHHHHHHhc---CCCceeeEeeEEecCCcceEEEeeCCCC
Q 026214           67 KNVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQM---SHDHILKLIGCCLETPIPILAFESVEYG  142 (241)
Q Consensus        67 ~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~~~lv~e~~~~g  142 (241)
                      .+.|+.|....+|+...++..+.||.-...   ....|..|..-|+.|   ..-.+++++++....+..+|++||++.+
T Consensus        22 ~~~v~GG~i~~a~~~~~~~~~~FvK~~~~~---~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l~~~   97 (288)
T PF03881_consen   22 IEPVSGGDINEAYRLDTDGGSYFVKVNSES---GRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFLEMG   97 (288)
T ss_dssp             EEEE--SSSSEEEEEETTS-EEEEEEEEGG---GCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE-----
T ss_pred             eEecCCCChhheEEEECCCccEEEEecChh---hHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEeecCC
Confidence            467888888999998878899999987632   345577888877777   3446788888888777889999998765

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=97.04  E-value=0.012  Score=49.52  Aligned_cols=30  Identities=23%  Similarity=0.406  Sum_probs=25.9

Q ss_pred             CCCeEEccCCCCCeeEcCCCcEEEccccCce
Q 026214          183 PRPIVYRDFKTAHILFNEENVAKMFDFSLSI  213 (241)
Q Consensus       183 ~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~  213 (241)
                      ..+++|+|+.+.||+++. +.+.|+||+.+.
T Consensus       186 ~~~liHgD~~~~Nil~~~-~~i~lIDfd~~~  215 (313)
T TIGR02906       186 IRGFCHQDYAYHNILLKD-NEVYVIDFDYCT  215 (313)
T ss_pred             cCceEcCCCCcccEEEeC-CcEEEEECcccc
Confidence            367899999999999987 678899999664

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>PRK12396 5-methylribose kinase; Reviewed

Probab=97.03  E-value=0.0055  Score=53.40  Aligned_cols=73  Identities=5%  Similarity=-0.047  Sum_probs=49.2

Q ss_pred             CCeeecccceEEEEEEEC--CeEEEEEEeec---cC---CcchhhHHHHHHHHHhcC--CC-ceeeEeeEEecCCcceEE
Q 026214           67 KNVITEDWGCILYKGFWQ--ERLISVMRFRE---SN---RDGHGSCINNIVYAAQMS--HD-HILKLIGCCLETPIPILA  135 (241)
Q Consensus        67 ~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~---~~---~~~~~~~~~E~~~l~~l~--h~-niv~l~~~~~~~~~~~lv  135 (241)
                      .+.||.|....||++.+.  +..|+||.-.+   ..   +-...+...|...|+...  .| .+++++  +.++....+|
T Consensus        34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy--~~D~e~~~~v  111 (409)
T PRK12396         34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVY--LFDSVMNCCV  111 (409)
T ss_pred             eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEE--EECcHHhhHH
Confidence            457899999999999983  67899996432   11   223466677888887763  34 455554  3455667788


Q ss_pred             EeeCCC
Q 026214          136 FESVEY  141 (241)
Q Consensus       136 ~e~~~~  141 (241)
                      ||+++.
T Consensus       112 MEdL~~  117 (409)
T PRK12396        112 MEDLSD  117 (409)
T ss_pred             HHhCcc
Confidence            998853

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=96.88  E-value=0.01  Score=50.13  Aligned_cols=32  Identities=16%  Similarity=0.273  Sum_probs=28.7

Q ss_pred             CCCeEEccCCCCCeeEcCCCcEEEccccCcee
Q 026214          183 PRPIVYRDFKTAHILFNEENVAKMFDFSLSIS  214 (241)
Q Consensus       183 ~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~  214 (241)
                      ..+++|+|+.+.|+|++.++.+.++||..+..
T Consensus       195 ~~~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~  226 (309)
T TIGR02904       195 RTVLVHGKLSLSHFLYDETRGGYFINFEKASF  226 (309)
T ss_pred             ceeeeCCCCcHHhEEEcCCCCEEEEEhhhccc
Confidence            45799999999999999998999999998764

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=96.86  E-value=0.019  Score=49.03  Aligned_cols=143  Identities=16%  Similarity=0.155  Sum_probs=77.7

Q ss_pred             CeeecccceEEEEEEECC-----eEEEEEEeeccCCcchhhHHHHHHHHHhcCCCce-eeEeeEEecCCcceEEEeeCCC
Q 026214           68 NVITEDWGCILYKGFWQE-----RLISVMRFRESNRDGHGSCINNIVYAAQMSHDHI-LKLIGCCLETPIPILAFESVEY  141 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~~~-----~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~~~  141 (241)
                      +.|..|-.-.+|+....+     ..|++|....... ..-.-.+|..++..+..-++ +++++++ ..+   ++.+|+++
T Consensus        20 ~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~-~~IdR~~E~~il~~l~~~gl~P~~l~~~-~~G---~i~~fi~g   94 (330)
T PLN02421         20 ERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTD-YVIDRERELQAIKYLSAAGFGAKLLGVF-GNG---MIQSFINA   94 (330)
T ss_pred             EEeCCcccceEEEEEecCCCCCCceEEEEEecCCcC-eEechHHHHHHHHHHHhcCCCCceeEEe-CCc---EeehhhcC
Confidence            345456667788887532     3788887655432 22223578888888865554 3455444 222   47888876


Q ss_pred             CCHHH--------------HH---hhcCCCC-CCCCCHHHHHHHHHHH----------------------HHHHH----H
Q 026214          142 GNLRD--------------RI---LSASQPQ-TEPLLMKHRLKIAMDI----------------------AHALA----Y  177 (241)
Q Consensus       142 gsL~~--------------~l---~~~~~~~-~~~l~~~~~~~i~~~i----------------------~~~l~----~  177 (241)
                      .+|..              .+   +...... ..+..+..+..+..++                      ..-+.    +
T Consensus        95 ~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~  174 (330)
T PLN02421         95 RTLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYETISFEELRDEIVELKEI  174 (330)
T ss_pred             CCCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhcccCHHHHHHHHHHHHHH
Confidence            55421              11   1110000 1111233333332221                      11111    1


Q ss_pred             Hh-CCCCCCeEEccCCCCCeeEcC-CCcEEEccccCceec
Q 026214          178 LH-FGFPRPIVYRDFKTAHILFNE-ENVAKMFDFSLSISI  215 (241)
Q Consensus       178 lH-~~~~~~ivH~dlk~~Nill~~-~~~~ki~DfG~a~~~  215 (241)
                      +. .....-+.|.|+.+.|||+++ ++.++++||..|..-
T Consensus       175 ~~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag~n  214 (330)
T PLN02421        175 TDSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGSYS  214 (330)
T ss_pred             hccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccCCC
Confidence            11 011234799999999999975 578999999988644

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=96.77  E-value=0.00022  Score=64.71  Aligned_cols=135  Identities=14%  Similarity=0.019  Sum_probs=89.5

Q ss_pred             CeeecccceEEEEEEECCe-EEEEEEeeccCCcchhhHHHHHHHHHhcCCCc-eeeEeeEEecCCcceEEEeeCCCC-CH
Q 026214           68 NVITEDWGCILYKGFWQER-LISVMRFRESNRDGHGSCINNIVYAAQMSHDH-ILKLIGCCLETPIPILAFESVEYG-NL  144 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~~~~-~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~e~~~~g-sL  144 (241)
                      +-.++++++.+||.+.+.. ....+.+...     ....-++++|.+++||| .+..++-+..+...++.++++..+ +-
T Consensus       248 h~fvK~altknpKkRptaeklL~h~fvs~~-----l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~rs~  322 (829)
T KOG0576|consen  248 HNFVKGALTKNPKKRPTAEKLLQHPFVSQT-----LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGRSS  322 (829)
T ss_pred             HHHHHHHhcCCCccCCChhhheeceeeccc-----hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCccc
Confidence            3468899999999987332 2223333221     33456789999999999 666676667777889999998765 21


Q ss_pred             HHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCC
Q 026214          145 RDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGG  219 (241)
Q Consensus       145 ~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~  219 (241)
                      ......    ....+.......++..-+.+++++|   +..-+|+|    ||+..+ +..+..||+....++...
T Consensus       323 ~~~~~~----se~~~~~~~~~~~~r~et~~l~~l~---~~~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~  385 (829)
T KOG0576|consen  323 ALEMTV----SEIALEQYQFAYPLRKETRPLAELH---SSYKVHRD----NILGSE-EEVKLLDFAVPPQLTRTM  385 (829)
T ss_pred             cccCCh----hhHhhhhhhhhhhhhhhcccccccc---cccccCcc----cccccc-cccccccccCCcccCccc
Confidence            111100    1112333445556777788899999   65567888    777755 678899999888776543

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=96.68  E-value=0.013  Score=47.05  Aligned_cols=103  Identities=14%  Similarity=0.015  Sum_probs=66.4

Q ss_pred             eEEEEEEeeccCCc-chhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHH
Q 026214           86 RLISVMRFRESNRD-GHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHR  164 (241)
Q Consensus        86 ~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~  164 (241)
                      .+..+|++...... ...-|.++.+++++++  .|+++..=  ..-..-++.|.|...              ....    
T Consensus        86 G~L~lKKi~slp~~~~~~~y~nky~v~Armh--GilrL~ND--n~~~yGvIlE~Cy~~--------------~i~~----  143 (308)
T PF07387_consen   86 GPLFLKKIRSLPCCINDALYFNKYRVFARMH--GILRLKND--NNYKYGVILERCYKI--------------KINF----  143 (308)
T ss_pred             chhhhhhccCCCcccchhhhhhhhhHHHHhh--heeEeecC--CCceeEEEEeeccCc--------------ccch----
Confidence            34566666554433 4566788888888875  46776511  122345677887531              1111    


Q ss_pred             HHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccC
Q 026214          165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL  211 (241)
Q Consensus       165 ~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~  211 (241)
                      ..++.-=+.+|.-.|+. ..+.+|+|..|+||+.|..|.+|+.|-+.
T Consensus       144 ~N~i~agi~~L~~fH~~-~~~~lHGD~np~NiM~D~~G~lKlVDP~~  189 (308)
T PF07387_consen  144 SNFITAGIKDLMDFHSE-NQHCLHGDCNPDNIMCDKFGYLKLVDPVC  189 (308)
T ss_pred             hHHHHHhHHHHHHhhcc-CCCeecCCCChhheeecCCCCEEecChhh
Confidence            11222224556777854 56899999999999999999999999763

The function of this family is unknown.

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=96.53  E-value=0.015  Score=46.23  Aligned_cols=32  Identities=25%  Similarity=0.427  Sum_probs=22.5

Q ss_pred             CCCeEEccCCCCCeeE-cCCCcEEEccccCcee
Q 026214          183 PRPIVYRDFKTAHILF-NEENVAKMFDFSLSIS  214 (241)
Q Consensus       183 ~~~ivH~dlk~~Nill-~~~~~~ki~DfG~a~~  214 (241)
                      ...+.|+|+.|.|||+ +.++.++++||..|..
T Consensus       142 ~~v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~  174 (211)
T PF01633_consen  142 PLVFCHNDLNPGNILINNKDGEVKLIDFEYAGY  174 (211)
T ss_dssp             GEEEE-S--SGGGEEETSSSSCEEE--GTT-EE
T ss_pred             CceEeeccCccccEEeccCCCeEEEecHHHHhh
Confidence            3567899999999999 8889999999998864

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=96.43  E-value=0.0025  Score=58.31  Aligned_cols=49  Identities=22%  Similarity=0.329  Sum_probs=42.6

Q ss_pred             HHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          168 AMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       168 ~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      +.+++.|+.|+|.  +.++||++|.|++|.++..+.+||+.|+++....++
T Consensus       105 l~~v~dgl~flh~--sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~  153 (700)
T KOG2137|consen  105 LGNVADGLAFLHR--SAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGP  153 (700)
T ss_pred             hhcccchhhhhcc--CcceeecccchhheeeccCcceeeccchhhhccCCC
Confidence            3345599999996  679999999999999999999999999998876653

>PRK11768 serine/threonine protein kinase; Provisional

Probab=96.15  E-value=0.4  Score=40.91  Aligned_cols=68  Identities=9%  Similarity=0.063  Sum_probs=40.8

Q ss_pred             ceEEEEEEE-CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCc--eeeEe---e--EEecCCcceEEEeeCCCCC
Q 026214           75 GCILYKGFW-QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDH--ILKLI---G--CCLETPIPILAFESVEYGN  143 (241)
Q Consensus        75 ~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~---~--~~~~~~~~~lv~e~~~~gs  143 (241)
                      --.||+... ++..+++|...... ....+...|+..+..|....  ++...   |  +...++..+.++++++|..
T Consensus        38 eN~vy~v~~~~~~~~vlKv~r~~~-~~~~~i~~E~~~l~~L~~~gipv~~p~~~~G~~~~~~~g~~~~l~~~~~G~~  113 (325)
T PRK11768         38 ENRVYQFGDEDGRRVVAKFYRPER-WSDAQILEEHAFALELAEAEIPVVAPLAFNGQTLHEHQGFRFALFPRRGGRA  113 (325)
T ss_pred             cceEEEEecCCCCEEEEEEcCccc-CCHHHHHHHHHHHHHHHHCCCCCCCCccCCCCEEEEECCEEEEEEeeeCCCC
Confidence            356898887 56788888875432 24455667877777663211  22211   1  1222456778899988653

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=95.80  E-value=0.039  Score=47.58  Aligned_cols=54  Identities=22%  Similarity=0.223  Sum_probs=43.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceec
Q 026214          159 LLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI  215 (241)
Q Consensus       159 l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~  215 (241)
                      -.+.+...++.+.+.-+.-+..  ..+.-|||+.-.||||+ +|++.|+||-+++.-
T Consensus       318 ~~~~e~lsff~s~~sil~~lek--kf~fehrnlt~~niLId-~GnvtLIDfklsRl~  371 (488)
T COG5072         318 DRSEEELSFFWSCISILDILEK--KFPFEHRNLTLDNILID-EGNVTLIDFKLSRLS  371 (488)
T ss_pred             ccHHHHHHHHHHHHHHHhhhhh--cCCcccccccccceeee-cCceEEEEeeeeecc
Confidence            4567777787776666666653  55789999999999999 999999999999943

>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]

Probab=95.71  E-value=0.038  Score=48.30  Aligned_cols=61  Identities=13%  Similarity=-0.058  Sum_probs=43.1

Q ss_pred             cceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEc
Q 026214          131 IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFN  199 (241)
Q Consensus       131 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~  199 (241)
                      ...|+-+|+.|-++..++...      ..++.....++.-.+.|+.-|--  --+++|.|+.|.||++-
T Consensus       319 ~~vl~E~~~~Gl~v~~~v~~~------~~pe~l~kkva~lg~~AllkMl~--vDNFvHaDlHPGNVlir  379 (565)
T KOG1236|consen  319 DLVLVETYERGLSVLRFVKWK------SQPEALVKKVAKLGVNALLKMLI--VDNFVHADLHPGNVLIR  379 (565)
T ss_pred             cceeeeeccccccHHhhhhcc------cChHHHHHHHHHHHHHHHHHHHH--hhcceecccCCCcEEEE
Confidence            345666788888898888443      24445666677777777664431  44899999999999994

>PTZ00384 choline kinase; Provisional

Probab=95.63  E-value=0.23  Score=43.47  Aligned_cols=30  Identities=17%  Similarity=0.049  Sum_probs=24.8

Q ss_pred             CCeEEccCCCCCeeEcCCCcEEEccccCcee
Q 026214          184 RPIVYRDFKTAHILFNEENVAKMFDFSLSIS  214 (241)
Q Consensus       184 ~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~  214 (241)
                      ....|.|+-+.|||.++ ..+.++||..|..
T Consensus       227 ~VfCHNDL~~gNIL~~~-~~l~lID~EYA~~  256 (383)
T PTZ00384        227 VLFCHNDLFFTNILDFN-QGIYFIDFDFAGF  256 (383)
T ss_pred             eeeeeccCCcccEEecC-CCEEEEEeccccC
Confidence            56799999999999754 4699999988753

>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly

Probab=94.90  E-value=0.039  Score=47.12  Aligned_cols=54  Identities=22%  Similarity=0.168  Sum_probs=36.0

Q ss_pred             HHHHHHHHHHHHHHH--H-hCCCCCCeEEccCCCCCeeEcCC------------------CcEEEccccCceecCCC
Q 026214          163 HRLKIAMDIAHALAY--L-HFGFPRPIVYRDFKTAHILFNEE------------------NVAKMFDFSLSISIPEG  218 (241)
Q Consensus       163 ~~~~i~~~i~~~l~~--l-H~~~~~~ivH~dlk~~Nill~~~------------------~~~ki~DfG~a~~~~~~  218 (241)
                      -+..+..||+  |.|  + ..++..+++|-||||.|||+-++                  -.+++.||.+|+.-+-.
T Consensus       276 YvkfifLQia--LLyikIYelp~c~nF~H~DLKPdNILiFds~~~i~I~~~~~~~vF~Epi~~~LnDFDfSqv~~i~  350 (434)
T PF05445_consen  276 YVKFIFLQIA--LLYIKIYELPCCTNFLHVDLKPDNILIFDSKEPIRIKFGNRNYVFKEPIRCCLNDFDFSQVANII  350 (434)
T ss_pred             HHHHHHHHHH--HHHeeeecCCCcceeeecccCcCcEEEecCCCceEEEECCeEEEecccceeeecccCHHHhcccc
Confidence            3445666665  444  3 23335679999999999999432                  23788888888765443

; GO: 0004672 protein kinase activity, 0005524 ATP binding

>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=94.80  E-value=0.33  Score=39.38  Aligned_cols=74  Identities=9%  Similarity=-0.094  Sum_probs=50.5

Q ss_pred             eeecccceEEEEEEECCeEEEEEEeeccCCcchhhHHHHHHHHHhc---CCCceeeEeeEEecCCcceEEEeeCCCCCHH
Q 026214           69 VITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQM---SHDHILKLIGCCLETPIPILAFESVEYGNLR  145 (241)
Q Consensus        69 ~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~  145 (241)
                      .+.-|..-..|...+...++.+|+=...   ....|..|+.-|..|   +.-.+.+++.+..+.+..|+|+||++-+.+.
T Consensus        23 ~v~gG~inea~~v~dg~~~~FvK~n~~~---~~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~sylVle~L~~~~~d   99 (286)
T COG3001          23 EVSGGDINEAWRLRDGTDPFFVKCNQRE---QLSMFTAEADGLELLARSNTITVPKVIAVGASRDHSYLVLEYLPTGPLD   99 (286)
T ss_pred             ccCCccccceeEeecCCcceEEEecchh---hHHHHHHHHHHHHHHHhcCCccccceEEecCCCCeeEEEEeeccCCCCC
Confidence            4444444445555556678888863322   345577777766666   3456788888888899999999999876554

>PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties []

Probab=94.70  E-value=0.25  Score=40.65  Aligned_cols=78  Identities=8%  Similarity=-0.080  Sum_probs=51.9

Q ss_pred             CCeeecccceEEEEEEE-CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeC-CCCCH
Q 026214           67 KNVITEDWGCILYKGFW-QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESV-EYGNL  144 (241)
Q Consensus        67 ~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~-~~gsL  144 (241)
                      ...+..|..+.|+.+.. +|.++++|...+......+  ......|+..+=...|++++.-..  .-.|++|.+ ++.+|
T Consensus         7 ~~~~~~g~~s~V~pv~~~dG~~avLKl~~p~~~~~~E--~~g~~~L~~w~G~GaVrll~~d~~--~~AlLLErl~~g~~L   82 (253)
T PF04655_consen    7 DGPPAHGSSSLVVPVRRADGTPAVLKLAPPHAEAEHE--ARGEAALRWWNGRGAVRLLAADPE--RGALLLERLDPGRSL   82 (253)
T ss_pred             CCCCCCCcceEEEEEEcCCCCeEEEEecCCcccchhh--hhHHhHhheeCCCCceeeeccccc--cchhhhhhccCCCch
Confidence            34566788999999988 8999999987654321111  112245777777788899876533  445667888 44577


Q ss_pred             HHHH
Q 026214          145 RDRI  148 (241)
Q Consensus       145 ~~~l  148 (241)
                      .++.
T Consensus        83 ~~~~   86 (253)
T PF04655_consen   83 ASLP   86 (253)
T ss_pred             hhcc
Confidence            6554

Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process

>PRK10271 thiK thiamine kinase; Provisional

Probab=94.53  E-value=0.031  Score=43.67  Aligned_cols=32  Identities=6%  Similarity=0.135  Sum_probs=26.9

Q ss_pred             CCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          184 RPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       184 ~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ...+|+|+.|.|+++++++ ++++||+.|..-+
T Consensus        77 ~~p~H~D~~~~N~~~~~~~-~~lIDwe~a~~gD  108 (188)
T PRK10271         77 LAPLHMDVHAGNLVHSASG-LRLIDWEYAGDGD  108 (188)
T ss_pred             eeeecCCCCCccEEEECCC-EEEEeCCcccCCC
Confidence            3568999999999998877 8899999886543

>PTZ00296 choline kinase; Provisional

Probab=94.05  E-value=1.3  Score=39.62  Aligned_cols=31  Identities=16%  Similarity=0.224  Sum_probs=25.5

Q ss_pred             CCCeEEccCCCCCeeEcCCCcEEEccccCcee
Q 026214          183 PRPIVYRDFKTAHILFNEENVAKMFDFSLSIS  214 (241)
Q Consensus       183 ~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~  214 (241)
                      ...+.|.|+-+.|||.+.++ ++++||..|..
T Consensus       283 ~~VfCHNDl~~~NiL~~~~~-l~LIDfEYAg~  313 (442)
T PTZ00296        283 DIVFCHNDLQENNIINTNKC-LRLIDFEYSGY  313 (442)
T ss_pred             CeeEEeCCCCccceeecCCC-EEEEeeccccc
Confidence            45679999999999886544 99999998864

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=94.01  E-value=0.14  Score=43.78  Aligned_cols=143  Identities=14%  Similarity=0.106  Sum_probs=78.7

Q ss_pred             CeeecccceEEEEEEECCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCc------eeeEeeEEe--cCC--cceEEEe
Q 026214           68 NVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQMSHDH------ILKLIGCCL--ETP--IPILAFE  137 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~--~~~--~~~lv~e  137 (241)
                      ..|.+ .--.+|+...++..+++|.....  ....+...|+..+..|.-..      +..+-|-..  -..  ..+-+++
T Consensus        32 ~~l~s-~eN~~f~~~~~~g~~iLki~~~~--~~~~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~~r~a~lf~  108 (331)
T COG2334          32 RGLNS-EENSNFRVQTEDGRYILKIYRPG--WTRAEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGGPRPAALFE  108 (331)
T ss_pred             ccccc-ccCceEEEEecCCCeEEEEecCC--CCHHHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccCCceeEEEEE
Confidence            34555 44568888885555688887765  34455666777777773111      222222221  123  6788899


Q ss_pred             eCCCCCHHH------------H---HhhcCC--C-----CCCCCCHHH----H---------HHHHHHHHHHHHHHhC--
Q 026214          138 SVEYGNLRD------------R---ILSASQ--P-----QTEPLLMKH----R---------LKIAMDIAHALAYLHF--  180 (241)
Q Consensus       138 ~~~~gsL~~------------~---l~~~~~--~-----~~~~l~~~~----~---------~~i~~~i~~~l~~lH~--  180 (241)
                      |++|..+..            .   ++....  .     ......|..    .         .....++...+..+..  
T Consensus       109 ~l~G~~~~~~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~~~~~~w~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~~~~  188 (331)
T COG2334         109 YLPGRPLERDDNAEQLEELGRMLGRLHLALRGFPFERPNALRRLEWDILEPRALLRLDLVEPEDLRAALLAALDRLLARL  188 (331)
T ss_pred             ecCCcCcCCCCcHHHHHHHHHHHHHHHHHhCcCCccCCCcccccchhhhcchhhhhhcccCchhhHHHHHHHHHHHHhhc
Confidence            999877662            1   111000  0     011122220    0         0112233333333331  


Q ss_pred             --CC-CCC--eEEccCCCCCeeEcCCCc-EEEccccCce
Q 026214          181 --GF-PRP--IVYRDFKTAHILFNEENV-AKMFDFSLSI  213 (241)
Q Consensus       181 --~~-~~~--ivH~dlk~~Nill~~~~~-~ki~DfG~a~  213 (241)
                        .. ..+  +||+|+.|.||+++.+.. +.+.||+.+.
T Consensus       189 ~~~lp~~~~~iIH~D~~~~NVl~d~~~~~~g~iDFdDa~  227 (331)
T COG2334         189 PAHLPALGDQIIHGDLHPDNVLFDDDTDVSGFIDFDDAG  227 (331)
T ss_pred             hhhCCcccceeeecCCCccceeEcCCCCeeeEEEccccc
Confidence              11 223  999999999999998874 8999999875

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=93.69  E-value=0.011  Score=52.56  Aligned_cols=73  Identities=12%  Similarity=0.192  Sum_probs=59.3

Q ss_pred             HHHHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEecC
Q 026214           57 LKLATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLET  129 (241)
Q Consensus        57 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  129 (241)
                      +..-.++|....++|.|+||+|+.+..  ++..+|||++...+ .....+.++|..-+..+.|++++++...|...
T Consensus        44 ~sr~a~~~e~~~~~~~~g~~~~~~~~n~~d~~~~avkritlkn~e~s~~rvl~~~~s~a~feh~g~~~~~ha~~~~  119 (516)
T KOG1033|consen   44 TSREANDFEPGQCLGRGGFGVVFSAQNKADENKYAVKRITLKNREESRSRVLREVSSLAEFEHPGIKRYFHAWYER  119 (516)
T ss_pred             hhhhhccccccccccccCccccCCccccccchhhHHHHhcccchhhhhhhhhccccchhhhcccchhhheeceecC
Confidence            344557888899999999999999998  66689999987544 33456678899999999999999998887654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	241
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		4e-13
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		5e-13
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		1e-12
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		2e-12
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		7e-09
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		7e-09
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		8e-09
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		1e-08
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		4e-07
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		5e-07
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		8e-07
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		3e-06
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		3e-06
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		3e-06
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		3e-06
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		3e-06
1fvr_A	327	Tie2 Kinase Domain Length = 327		4e-06
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		5e-06
2oo8_X	317	Synthesis, Structural Analysis, And Sar Studies Of		5e-06
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		5e-06
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		5e-06
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		8e-06
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		9e-06
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		1e-05
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		1e-05
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		1e-05
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		1e-05
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		1e-05
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		1e-05
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		1e-05
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		1e-05
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		1e-05
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		1e-05
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		2e-05
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		2e-05
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		2e-05
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		2e-05
2wqb_A	324	Structure Of The Tie2 Kinase Domain In Complex With		2e-05
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		2e-05
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		2e-05
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		2e-05
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		2e-05
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		2e-05
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		2e-05
4e20_A	290	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		2e-05
4e1z_A	291	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		2e-05
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		2e-05
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		2e-05
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		2e-05
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		2e-05
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		2e-05
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		2e-05
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		4e-05
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		5e-05
3pxk_A	282	Focal Adhesion Kinase Catalytic Domain In Complex W		6e-05
1mp8_A	281	Crystal Structure Of Focal Adhesion Kinase (Fak) Le		6e-05
2etm_A	281	Crystal Structure Of Focal Adhesion Kinase Domain C		6e-05
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		6e-05
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		7e-05
2jkm_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		7e-05
2j0m_B	276	Crystal Structure A Two-Chain Complex Between The F		7e-05
4ebw_A	304	Structure Of Focal Adhesion Kinase Catalytic Domain		7e-05
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		7e-05
3bz3_A	276	Crystal Structure Analysis Of Focal Adhesion Kinase		7e-05
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		8e-05
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		8e-05
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		8e-05
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		9e-05
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		9e-05
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		9e-05
2j0l_A	276	Crystal Structure Of A The Active Conformation Of T		9e-05
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		1e-04
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		1e-04
2jkk_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		1e-04
2j0j_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		1e-04
2p0c_A	313	Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro		1e-04
2j0k_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		1e-04
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		1e-04
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		2e-04
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		3e-04
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		3e-04
2ivv_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		3e-04
2ivt_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		3e-04
2ivs_A	314	Crystal Structure Of Non-Phosphorylated Ret Tyrosin		3e-04
3kmw_A	271	Crystal Structure Of The IlkALPHA-Parvin Core Compl		4e-04
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		4e-04
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		4e-04
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		5e-04
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		6e-04
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		6e-04
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		6e-04
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		6e-04
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		6e-04
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		6e-04
3qup_A	323	Inhibitor Bound Structure Of The Kinase Domain Of T		6e-04
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		6e-04
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		7e-04
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		7e-04
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		7e-04
3cjf_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		7e-04
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		7e-04
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		7e-04
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		7e-04
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		8e-04
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		9e-04
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		9e-04
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		9e-04
3kxx_A	317	Structure Of The Mutant Fibroblast Growth Factor Re		9e-04

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 71.6 bits (174), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/167 (32%), Positives = 86/167 (51%), Gaps = 11/167 (6%)
Query: 52  FSAQELKLATNNYDQKNVITEDWGCILYKGFWQE-RLISVMRFRESNRDGHGSCINNIVY 110
           FS +EL++A++N+  KN++       +YKG   +  L++V R +E    G        V 
Sbjct: 28  FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVE 87
Query: 111 AAQMS-HDHILKLIGCCLETPIPILAFESVEYGN----LRDRILSASQPQTEPLLMKHRL 165
              M+ H ++L+L G C+     +L +  +  G+    LR+R    SQP   PL    R 
Sbjct: 88  MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRER--PESQP---PLDWPKRQ 142
Query: 166 KIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
           +IA+  A  LAYLH      I++RD K A+IL +EE  A + DF L+
Sbjct: 143 RIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 189

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 55/167 (32%), Positives = 86/167 (51%), Gaps = 11/167 (6%)
Query: 52  FSAQELKLATNNYDQKNVITEDWGCILYKGFWQE-RLISVMRFRESNRDGHGSCINNIVY 110
           FS +EL++A++N+  KN++       +YKG   +  L++V R +E    G        V 
Sbjct: 20  FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVE 79
Query: 111 AAQMS-HDHILKLIGCCLETPIPILAFESVEYGN----LRDRILSASQPQTEPLLMKHRL 165
              M+ H ++L+L G C+     +L +  +  G+    LR+R    SQP   PL    R 
Sbjct: 80  MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRER--PESQP---PLDWPKRQ 134
Query: 166 KIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
           +IA+  A  LAYLH      I++RD K A+IL +EE  A + DF L+
Sbjct: 135 RIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 181

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 88/177 (49%), Gaps = 6/177 (3%)
Query: 46  YNPYRIFSAQELKLATNNYDQKNVITEDWGCILYKGFWQERL-ISVMRFRESNRDGHGSC 104
           +  YR+    +L+ ATNN+D K +I       +YKG  ++   +++ R    +  G    
Sbjct: 24  FESYRV-PLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEF 82
Query: 105 INNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHR 164
              I   +   H H++ LIG C E    IL ++ +E GNL+  +  +  P T  +  + R
Sbjct: 83  ETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLP-TMSMSWEQR 141
Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTS 221
           L+I +  A  L YLH    R I++RD K+ +IL +E  V K+ DF +S    E G +
Sbjct: 142 LEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQT 195

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 85/168 (50%), Gaps = 6/168 (3%)
Query: 46  YNPYRIFSAQELKLATNNYDQKNVITEDWGCILYKGFWQERL-ISVMRFRESNRDGHGSC 104
           +  YR+    +L+ ATNN+D K +I       +YKG  ++   +++ R    +  G    
Sbjct: 24  FESYRV-PLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEF 82
Query: 105 INNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHR 164
              I   +   H H++ LIG C E    IL ++ +E GNL+  +  +  P T  +  + R
Sbjct: 83  ETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLP-TMSMSWEQR 141
Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
           L+I +  A  L YLH    R I++RD K+ +IL +E  V K+ DF +S
Sbjct: 142 LEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGIS 186

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 57.4 bits (137), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 83/174 (47%), Gaps = 15/174 (8%)
Query: 49  YRIFSAQELKLATNNYDQK------NVITEDWGCILYKGFWQERLISVMRFRE----SNR 98
           +  FS  ELK  TNN+D++      N + E    ++YKG+     ++V +       +  
Sbjct: 12  FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE 71
Query: 99  DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEP 158
           +        I   A+  H+++++L+G   +     L +  +  G+L DR+  +    T P
Sbjct: 72  ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPP 129
Query: 159 LLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
           L    R KIA   A+ + +LH       ++RD K+A+IL +E   AK+ DF L+
Sbjct: 130 LSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLA 180

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 57.4 bits (137), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 83/174 (47%), Gaps = 15/174 (8%)
Query: 49  YRIFSAQELKLATNNYDQK------NVITEDWGCILYKGFWQERLISVMRFRE----SNR 98
           +  FS  ELK  TNN+D++      N + E    ++YKG+     ++V +       +  
Sbjct: 12  FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE 71
Query: 99  DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEP 158
           +        I   A+  H+++++L+G   +     L +  +  G+L DR+  +    T P
Sbjct: 72  ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPP 129
Query: 159 LLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
           L    R KIA   A+ + +LH       ++RD K+A+IL +E   AK+ DF L+
Sbjct: 130 LSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLA 180

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 57.0 bits (136), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 83/174 (47%), Gaps = 15/174 (8%)
Query: 49  YRIFSAQELKLATNNYDQK------NVITEDWGCILYKGFWQERLISVMRFRE----SNR 98
           +  FS  ELK  TNN+D++      N + E    ++YKG+     ++V +       +  
Sbjct: 6   FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE 65
Query: 99  DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEP 158
           +        I   A+  H+++++L+G   +     L +  +  G+L DR+  +    T P
Sbjct: 66  ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPP 123
Query: 159 LLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
           L    R KIA   A+ + +LH       ++RD K+A+IL +E   AK+ DF L+
Sbjct: 124 LSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLA 174

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 81/174 (46%), Gaps = 15/174 (8%)
Query: 49  YRIFSAQELKLATNNYDQK------NVITEDWGCILYKGFWQERLISVMRFRE----SNR 98
           +  FS  ELK  TNN+D++      N   E    ++YKG+     ++V +       +  
Sbjct: 3   FHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE 62
Query: 99  DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEP 158
           +        I   A+  H+++++L+G   +     L +     G+L DR+  +    T P
Sbjct: 63  ELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRL--SCLDGTPP 120
Query: 159 LLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
           L    R KIA   A+ + +LH       ++RD K+A+IL +E   AK+ DF L+
Sbjct: 121 LSWHXRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLA 171

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 54/111 (48%), Gaps = 19/111 (17%)
Query: 114 MSHDHILKLIGCCLETPIPILAFESVEYGNLR--------DRILSA-SQPQTEPLLMKHR 164
           + H+HI+K  G C+E    I+ FE +++G+L         D +L A   P TE L     
Sbjct: 72  LQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTE-LTQSQM 130
Query: 165 LKIAMDIAHALAYL---HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
           L IA  IA  + YL   HF      V+RD  T + L  E  + K+ DF +S
Sbjct: 131 LHIAQQIAAGMVYLASQHF------VHRDLATRNCLVGENLLVKIGDFGMS 175

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 11/107 (10%)
Query: 114 MSHDHILKLIGCCLETPIPIL--AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
           + H+HI+K  GCC +     L    E V  G+LRD +   S      + +   L  A  I
Sbjct: 90  LYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS------IGLAQLLLFAQQI 143
Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG 218
              +AYLH    +  ++RD    ++L + + + K+ DF L+ ++PEG
Sbjct: 144 CEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 187

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 70/139 (50%), Gaps = 9/139 (6%)
Query: 78  LYKGFWQERLISVMRFRESNRDGHGSCINN----IVYAAQMSHDHILKLIGCCLETPIPI 133
           +++  W    ++V    E  +D H   +N     +    ++ H +I+  +G   + P   
Sbjct: 53  VHRAEWHGSDVAVKILME--QDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLS 110
Query: 134 LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKT 193
           +  E +  G+L  R+L  S  + E L  + RL +A D+A  + YLH   P PIV+RD K+
Sbjct: 111 IVTEYLSRGSLY-RLLHKSGAR-EQLDERRRLSMAYDVAKGMNYLHNRNP-PIVHRDLKS 167
Query: 194 AHILFNEENVAKMFDFSLS 212
            ++L +++   K+ DF LS
Sbjct: 168 PNLLVDKKYTVKVCDFGLS 186

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 21/143 (14%)
Query: 87  LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRD 146
           L++V   +E++                + H HI++  G C E    ++ FE + +G+L +
Sbjct: 73  LVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL-N 131
Query: 147 RILSASQPQTE-----------PLLMKHRLKIAMDIAHALAY---LHFGFPRPIVYRDFK 192
           R L +  P  +           PL +   L +A  +A  + Y   LHF      V+RD  
Sbjct: 132 RFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHF------VHRDLA 185
Query: 193 TAHILFNEENVAKMFDFSLSISI 215
           T + L  +  V K+ DF +S  I
Sbjct: 186 TRNCLVGQGLVVKIGDFGMSRDI 208

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 70/139 (50%), Gaps = 9/139 (6%)
Query: 78  LYKGFWQERLISVMRFRESNRDGHGSCINN----IVYAAQMSHDHILKLIGCCLETPIPI 133
           +++  W    ++V    E  +D H   +N     +    ++ H +I+  +G   + P   
Sbjct: 53  VHRAEWHGSDVAVKILME--QDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLS 110
Query: 134 LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKT 193
           +  E +  G+L  R+L  S  + E L  + RL +A D+A  + YLH   P PIV+R+ K+
Sbjct: 111 IVTEYLSRGSLY-RLLHKSGAR-EQLDERRRLSMAYDVAKGMNYLHNRNP-PIVHRNLKS 167
Query: 194 AHILFNEENVAKMFDFSLS 212
            ++L +++   K+ DF LS
Sbjct: 168 PNLLVDKKYTVKVCDFGLS 186

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 68/147 (46%), Gaps = 18/147 (12%)
Query: 78  LYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQM----SHDHILKLIGCCLETPIPI 133
           +Y+ FW    ++V   R    +     I N+   A++     H +I+ L G CL+ P   
Sbjct: 23  VYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLC 82
Query: 134 LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKT 193
           L  E    G L +R+LS  +   + L+       A+ IA  + YLH     PI++RD K+
Sbjct: 83  LVMEFARGGPL-NRVLSGKRIPPDILV-----NWAVQIARGMNYLHDEAIVPIIHRDLKS 136
Query: 194 AHILFNEE--------NVAKMFDFSLS 212
           ++IL  ++         + K+ DF L+
Sbjct: 137 SNILILQKVENGDLSNKILKITDFGLA 163

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 21/143 (14%)
Query: 87  LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRD 146
           L++V   +E++                + H HI++  G C E    ++ FE + +G+L +
Sbjct: 44  LVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL-N 102
Query: 147 RILSASQPQTE-----------PLLMKHRLKIAMDIAHALAY---LHFGFPRPIVYRDFK 192
           R L +  P  +           PL +   L +A  +A  + Y   LHF      V+RD  
Sbjct: 103 RFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHF------VHRDLA 156
Query: 193 TAHILFNEENVAKMFDFSLSISI 215
           T + L  +  V K+ DF +S  I
Sbjct: 157 TRNCLVGQGLVVKIGDFGMSRDI 179

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 21/143 (14%)
Query: 87  LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRD 146
           L++V   +E++                + H HI++  G C E    ++ FE + +G+L +
Sbjct: 50  LVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL-N 108
Query: 147 RILSASQPQTE-----------PLLMKHRLKIAMDIAHALAY---LHFGFPRPIVYRDFK 192
           R L +  P  +           PL +   L +A  +A  + Y   LHF      V+RD  
Sbjct: 109 RFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHF------VHRDLA 162
Query: 193 TAHILFNEENVAKMFDFSLSISI 215
           T + L  +  V K+ DF +S  I
Sbjct: 163 TRNCLVGQGLVVKIGDFGMSRDI 185

>pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 88/199 (44%), Gaps = 31/199 (15%)
Query: 35  LKELIASSNGKYNP----YRIFSAQELKLATNNYDQKNVITE-DWGCILYKGFWQERL-- 87
           +K+     +GK NP    Y +    ++K        ++VI E ++G +L     ++ L  
Sbjct: 1   MKKHHHHHHGKNNPDPTIYPVLDWNDIKF-------QDVIGEGNFGQVLKARIKKDGLRM 53
Query: 88  -ISVMRFRE-SNRDGHGSCINNIVYAAQMSH-DHILKLIGCCLETPIPILAFESVEYGNL 144
             ++ R +E +++D H      +    ++ H  +I+ L+G C       LA E   +GNL
Sbjct: 54  DAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNL 113
Query: 145 RDRILSASQPQTEP-----------LLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKT 193
            D +  +   +T+P           L  +  L  A D+A  + YL     +  ++RD   
Sbjct: 114 LDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAA 170
Query: 194 AHILFNEENVAKMFDFSLS 212
            +IL  E  VAK+ DF LS
Sbjct: 171 RNILVGENYVAKIADFGLS 189

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 68/161 (42%), Gaps = 26/161 (16%)
Query: 75  GCILYKGFWQERLISV-MRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPI 133
           G + Y+ F    +++V M   E++ D            A+  + +I+KL+G C       
Sbjct: 70  GLLPYEPF---TMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMC 126
Query: 134 LAFESVEYGNLRDRILS-------------------ASQPQTEPLLMKHRLKIAMDIAHA 174
           L FE + YG+L + + S                    S P   PL    +L IA  +A  
Sbjct: 127 LLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAG 186
Query: 175 LAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
           +AYL     R  V+RD  T + L  E  V K+ DF LS +I
Sbjct: 187 MAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNI 224

>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 16/137 (11%)
Query: 89  SVMRFRE-SNRDGHGSCINNIVYAAQMSH-DHILKLIGCCLETPIPILAFESVEYGNLRD 146
           ++ R +E +++D H      +    ++ H  +I+ L+G C       LA E   +GNL D
Sbjct: 46  AIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD 105
Query: 147 RILSASQPQTEP-----------LLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
            +  +   +T+P           L  +  L  A D+A  + YL     +  ++RD    +
Sbjct: 106 FLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARN 162
Query: 196 ILFNEENVAKMFDFSLS 212
           IL  E  VAK+ DF LS
Sbjct: 163 ILVGENYVAKIADFGLS 179

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 11/107 (10%)
Query: 114 MSHDHILKLIGCCLETPIPIL--AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
           + H+HI+K  GCC +     L    E V  G+LRD +   S      + +   L  A  I
Sbjct: 73  LYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS------IGLAQLLLFAQQI 126
Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG 218
              +AYLH    +  ++R+    ++L + + + K+ DF L+ ++PEG
Sbjct: 127 CEGMAYLH---AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEG 170

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 11/107 (10%)
Query: 114 MSHDHILKLIGCCLETPIPIL--AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
           + H+HI+K  GCC +     L    E V  G+LRD +   S      + +   L  A  I
Sbjct: 73  LYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS------IGLAQLLLFAQQI 126
Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG 218
              +AYLH    +  ++R+    ++L + + + K+ DF L+ ++PEG
Sbjct: 127 CEGMAYLH---SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEG 170

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 47.0 bits (110), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 78  LYKGFWQER--LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA 135
           +Y+G W++    ++V   +E   +     +       ++ H ++++L+G C   P   + 
Sbjct: 29  VYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87
Query: 136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
            E + YGNL D +   ++ +   +++   L +A  I+ A+ YL     +  ++RD    +
Sbjct: 88  IEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARN 141
Query: 196 ILFNEENVAKMFDFSLS 212
            L  E ++ K+ DF LS
Sbjct: 142 CLVGENHLVKVADFGLS 158

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
           ++SH  +++L G CLE     L FE +E+G L D +    + Q      +  L + +D+ 
Sbjct: 58  KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL----RTQRGLFAAETLLGMCLDVC 113
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
             +AYL       +++RD    + L  E  V K+ DF ++
Sbjct: 114 EGMAYLE---EASVIHRDLAARNCLVGENQVIKVSDFGMT 150

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 78  LYKGFWQER--LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA 135
           +Y+G W++    ++V   +E   +     +       ++ H ++++L+G C   P   + 
Sbjct: 29  VYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87
Query: 136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
            E + YGNL D +   ++ +   +++   L +A  I+ A+ YL     +  ++RD    +
Sbjct: 88  IEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARN 141
Query: 196 ILFNEENVAKMFDFSLS 212
            L  E ++ K+ DF LS
Sbjct: 142 CLVGENHLVKVADFGLS 158

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 78  LYKGFWQER--LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA 135
           +Y+G W++    ++V   +E   +     +       ++ H ++++L+G C   P   + 
Sbjct: 27  VYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 85
Query: 136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
            E + YGNL D +   ++ +   +++   L +A  I+ A+ YL     +  ++RD    +
Sbjct: 86  IEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARN 139
Query: 196 ILFNEENVAKMFDFSLS 212
            L  E ++ K+ DF LS
Sbjct: 140 CLVGENHLVKVADFGLS 156

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 78  LYKGFWQER--LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA 135
           +Y+G W++    ++V   +E   +     +       ++ H ++++L+G C   P   + 
Sbjct: 30  VYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 88
Query: 136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
            E + YGNL D +   ++ +   +++   L +A  I+ A+ YL     +  ++RD    +
Sbjct: 89  IEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARN 142
Query: 196 ILFNEENVAKMFDFSLS 212
            L  E ++ K+ DF LS
Sbjct: 143 CLVGENHLVKVADFGLS 159

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
           ++SH  +++L G CLE     L FE +E+G L D +    + Q      +  L + +D+ 
Sbjct: 61  KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL----RTQRGLFAAETLLGMCLDVC 116
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
             +AYL       +++RD    + L  E  V K+ DF ++
Sbjct: 117 EGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMT 153

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
           ++SH  +++L G CLE     L FE +E+G L D +    + Q      +  L + +D+ 
Sbjct: 58  KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL----RTQRGLFAAETLLGMCLDVC 113
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
             +AYL       +++RD    + L  E  V K+ DF ++
Sbjct: 114 EGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMT 150

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 78  LYKGFWQER--LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA 135
           +Y+G W++    ++V   +E   +     +       ++ H ++++L+G C   P   + 
Sbjct: 27  VYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 85
Query: 136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
            E + YGNL D +   ++ +   +++   L +A  I+ A+ YL     +  ++RD    +
Sbjct: 86  TEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARN 139
Query: 196 ILFNEENVAKMFDFSLS 212
            L  E ++ K+ DF LS
Sbjct: 140 CLVGENHLVKVADFGLS 156

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 66/128 (51%), Gaps = 20/128 (15%)
Query: 90  VMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRIL 149
           + +F+E  R+        +   + ++H +I+KL G  +  P P +  E V  G+L  R+L
Sbjct: 64  IEKFQEFQRE--------VFIMSNLNHPNIVKLYGL-MHNP-PRMVMEFVPCGDLYHRLL 113
Query: 150 SASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFN--EENV---A 204
             +     P+    +L++ +DIA  + Y+    P PIV+RD ++ +I     +EN    A
Sbjct: 114 DKAH----PIKWSVKLRLMLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCA 168
Query: 205 KMFDFSLS 212
           K+ DFSLS
Sbjct: 169 KVADFSLS 176

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 78  LYKGFWQER--LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA 135
           +Y+G W++    ++V   +E   +     +       ++ H ++++L+G C   P   + 
Sbjct: 34  VYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 92
Query: 136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
            E + YGNL D +   ++ +   +++   L +A  I+ A+ YL     +  ++RD    +
Sbjct: 93  IEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARN 146
Query: 196 ILFNEENVAKMFDFSLS 212
            L  E ++ K+ DF LS
Sbjct: 147 CLVGENHLVKVADFGLS 163

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 78  LYKGFWQER--LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA 135
           +Y+G W++    ++V   +E   +     +       ++ H ++++L+G C   P   + 
Sbjct: 29  VYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87
Query: 136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
            E + YGNL D +   ++ +   +++   L +A  I+ A+ YL     +  ++RD    +
Sbjct: 88  TEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARN 141
Query: 196 ILFNEENVAKMFDFSLS 212
            L  E ++ K+ DF LS
Sbjct: 142 CLVGENHLVKVADFGLS 158

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 78  LYKGFWQER--LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA 135
           +Y+G W++    ++V   +E   +     +       ++ H ++++L+G C   P   + 
Sbjct: 27  VYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 85
Query: 136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
            E + YGNL D +   ++ +   +++   L +A  I+ A+ YL     +  ++RD    +
Sbjct: 86  TEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARN 139
Query: 196 ILFNEENVAKMFDFSLS 212
            L  E ++ K+ DF LS
Sbjct: 140 CLVGENHLVKVADFGLS 156

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 78  LYKGFWQER--LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA 135
           +Y+G W++    ++V   +E   +     +       ++ H ++++L+G C   P   + 
Sbjct: 29  VYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87
Query: 136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
            E + YGNL D +   ++ +   +++   L +A  I+ A+ YL     +  ++RD    +
Sbjct: 88  TEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARN 141
Query: 196 ILFNEENVAKMFDFSLS 212
            L  E ++ K+ DF LS
Sbjct: 142 CLVGENHLVKVADFGLS 158

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 78  LYKGFWQER--LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA 135
           +Y+G W++    ++V   +E   +     +       ++ H ++++L+G C   P   + 
Sbjct: 34  VYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 92
Query: 136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
            E + YGNL D +   ++ +   +++   L +A  I+ A+ YL     +  ++RD    +
Sbjct: 93  TEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARN 146
Query: 196 ILFNEENVAKMFDFSLS 212
            L  E ++ K+ DF LS
Sbjct: 147 CLVGENHLVKVADFGLS 163

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
           ++SH  +++L G CLE     L FE +E+G L D +    + Q      +  L + +D+ 
Sbjct: 56  KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL----RTQRGLFAAETLLGMCLDVC 111
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
             +AYL       +++RD    + L  E  V K+ DF ++
Sbjct: 112 EGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMT 148

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 78  LYKGFWQER--LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA 135
           +Y+G W++    ++V   +E   +     +       ++ H ++++L+G C   P   + 
Sbjct: 42  VYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 100
Query: 136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
            E + YGNL D +   ++ +   +++   L +A  I+ A+ YL     +  ++RD    +
Sbjct: 101 TEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARN 154
Query: 196 ILFNEENVAKMFDFSLS 212
            L  E ++ K+ DF LS
Sbjct: 155 CLVGENHLVKVADFGLS 171

>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 16/137 (11%)
Query: 89  SVMRFRE-SNRDGHGSCINNIVYAAQMSH-DHILKLIGCCLETPIPILAFESVEYGNLRD 146
           ++ R +E +++D H      +    ++ H  +I+ L+G C       LA E   +GNL D
Sbjct: 53  AIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD 112
Query: 147 RILSASQPQTEP-----------LLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
            +  +   +T+P           L  +  L  A D+A  + YL     +  ++R+    +
Sbjct: 113 FLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRNLAARN 169
Query: 196 ILFNEENVAKMFDFSLS 212
           IL  E  VAK+ DF LS
Sbjct: 170 ILVGENYVAKIADFGLS 186

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 78  LYKGFWQER--LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA 135
           +Y+G W++    ++V   +E   +     +       ++ H ++++L+G C   P   + 
Sbjct: 34  VYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 92
Query: 136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
            E + YGNL D +   ++ +   +++   L +A  I+ A+ YL     +  ++RD    +
Sbjct: 93  TEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARN 146
Query: 196 ILFNEENVAKMFDFSLS 212
            L  E ++ K+ DF LS
Sbjct: 147 CLVGENHLVKVADFGLS 163

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 78  LYKGFWQER--LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA 135
           +Y+G W++    ++V   +E   +     +       ++ H ++++L+G C   P   + 
Sbjct: 31  VYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 89
Query: 136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
            E + YGNL D +   ++ +   +++   L +A  I+ A+ YL     +  ++RD    +
Sbjct: 90  TEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARN 143
Query: 196 ILFNEENVAKMFDFSLS 212
            L  E ++ K+ DF LS
Sbjct: 144 CLVGENHLVKVADFGLS 160

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 78  LYKGFWQER--LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA 135
           +Y+G W++    ++V   +E   +     +       ++ H ++++L+G C   P   + 
Sbjct: 30  VYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 88
Query: 136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
            E + YGNL D +   ++ +   +++   L +A  I+ A+ YL     +  ++RD    +
Sbjct: 89  TEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARN 142
Query: 196 ILFNEENVAKMFDFSLS 212
            L  E ++ K+ DF LS
Sbjct: 143 CLVGENHLVKVADFGLS 159

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 78  LYKGFWQER--LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA 135
           +Y+G W++    ++V   +E   +     +       ++ H ++++L+G C   P   + 
Sbjct: 31  VYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 89
Query: 136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
            E + YGNL D +   ++ +   +++   L +A  I+ A+ YL     +  ++RD    +
Sbjct: 90  TEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARN 143
Query: 196 ILFNEENVAKMFDFSLS 212
            L  E ++ K+ DF LS
Sbjct: 144 CLVGENHLVKVADFGLS 160

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
           ++SH  +++L G CLE     L FE +E+G L D +    + Q      +  L + +D+ 
Sbjct: 78  KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL----RTQRGLFAAETLLGMCLDVC 133
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
             +AYL       +++RD    + L  E  V K+ DF ++
Sbjct: 134 EGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMT 170

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 78  LYKGFWQER--LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA 135
           +Y+G W++    ++V   +E   +     +       ++ H ++++L+G C   P   + 
Sbjct: 31  VYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 89
Query: 136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
            E + YGNL D +   ++ +   +++   L +A  I+ A+ YL     +  ++RD    +
Sbjct: 90  TEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARN 143
Query: 196 ILFNEENVAKMFDFSLS 212
            L  E ++ K+ DF LS
Sbjct: 144 CLVGENHLVKVADFGLS 160

>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 114 MSHDHILKLIGCCLET--PIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
           + H+HI+K  GCC +       L  E V  G+LRD +        + LL       A  I
Sbjct: 67  LYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLL------FAQQI 120
Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG 218
              +AYLH    +  ++R     ++L + + + K+ DF L+ ++PEG
Sbjct: 121 CEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEG 164

>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 114 MSHDHILKLIGCCLET--PIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
           + H+HI+K  GCC +       L  E V  G+LRD +        + LL       A  I
Sbjct: 68  LYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLL------FAQQI 121
Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG 218
              +AYLH    +  ++R     ++L + + + K+ DF L+ ++PEG
Sbjct: 122 CEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEG 165

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 78  LYKGFWQER--LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA 135
           +Y+G W++    ++V   +E   +     +       ++ H ++++L+G C   P   + 
Sbjct: 29  VYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87
Query: 136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
            E + YGNL D +   ++ +   +++   L +A  I+ A+ YL     +  ++RD    +
Sbjct: 88  TEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARN 141
Query: 196 ILFNEENVAKMFDFSLS 212
            L  E ++ K+ DF LS
Sbjct: 142 CLVGENHLVKVADFGLS 158

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 78  LYKGFWQER--LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA 135
           +Y+G W++    ++V   +E   +     +       ++ H ++++L+G C   P   + 
Sbjct: 33  VYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 91
Query: 136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
            E + YGNL D +   ++ +   +++   L +A  I+ A+ YL     +  ++RD    +
Sbjct: 92  TEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARN 145
Query: 196 ILFNEENVAKMFDFSLS 212
            L  E ++ K+ DF LS
Sbjct: 146 CLVGENHLVKVADFGLS 162

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 78  LYKGFWQER--LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA 135
           +Y+G W++    ++V   +E   +     +       ++ H ++++L+G C   P   + 
Sbjct: 34  VYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 92
Query: 136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
            E + YGNL D +   ++ +   +++   L +A  I+ A+ YL     +  ++RD    +
Sbjct: 93  TEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARN 146
Query: 196 ILFNEENVAKMFDFSLS 212
            L  E ++ K+ DF LS
Sbjct: 147 CLVGENHLVKVADFGLS 163

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 68/138 (49%), Gaps = 11/138 (7%)
Query: 78  LYKGFWQER--LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCC-LETPIPIL 134
           +Y G W++    ++V   +E   +     +       ++ H ++++L+G C LE P  I+
Sbjct: 48  VYVGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIV 106
Query: 135 AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTA 194
             E + YGNL D +   ++ +   +++   L +A  I+ A+ YL     +  ++RD    
Sbjct: 107 T-EYMPYGNLLDYLRECNREEVTAVVL---LYMATQISSAMEYLE---KKNFIHRDLAAR 159
Query: 195 HILFNEENVAKMFDFSLS 212
           + L  E +V K+ DF LS
Sbjct: 160 NCLVGENHVVKVADFGLS 177

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 78  LYKGFWQER--LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA 135
           +Y+G W++    ++V   +E   +     +       ++ H ++++L+G C   P   + 
Sbjct: 34  VYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 92
Query: 136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
            E + YGNL D +   ++ +   +++   L +A  I+ A+ YL     +  ++RD    +
Sbjct: 93  TEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARN 146
Query: 196 ILFNEENVAKMFDFSLS 212
            L  E ++ K+ DF LS
Sbjct: 147 CLVGENHLVKVADFGLS 163

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 78  LYKGFWQER--LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA 135
           +Y+G W++    ++V   +E   +     +       ++ H ++++L+G C   P   + 
Sbjct: 29  VYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87
Query: 136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
            E + YGNL D +   ++ +   +++   L +A  I+ A+ YL     +  ++RD    +
Sbjct: 88  TEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARN 141
Query: 196 ILFNEENVAKMFDFSLS 212
            L  E ++ K+ DF LS
Sbjct: 142 CLVGENHLVKVADFGLS 158

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 65/128 (50%), Gaps = 20/128 (15%)
Query: 90  VMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRIL 149
           + +F+E  R+        +   + ++H +I+KL G  +  P P +  E V  G+L  R+L
Sbjct: 64  IEKFQEFQRE--------VFIMSNLNHPNIVKLYGL-MHNP-PRMVMEFVPCGDLYHRLL 113
Query: 150 SASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFN--EENV---A 204
             +     P+    +L++ +DIA  + Y+    P PIV+RD ++ +I     +EN    A
Sbjct: 114 DKAH----PIKWSVKLRLMLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCA 168
Query: 205 KMFDFSLS 212
           K+ DF LS
Sbjct: 169 KVADFGLS 176

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 14/116 (12%)
Query: 111 AAQMSHDHILKLIGCC-LETP---IPILAFESVEYGNLRDRILSASQPQTE-PLLMKHRL 165
           AA ++H  I+ +      ETP   +P +  E V+   LRD +       TE P+  K  +
Sbjct: 66  AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV------HTEGPMTPKRAI 119
Query: 166 KIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTS 221
           ++   IA A   L+F     I++RD K A+IL +  N  K+ DF ++ +I + G S
Sbjct: 120 EV---IADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNS 172

>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
           Q  H HI+KLIG   E P+ I+  E    G LR    S  Q +   L +   +  A  ++
Sbjct: 70  QFDHPHIVKLIGVITENPVWII-MELCTLGELR----SFLQVRKYSLDLASLILYAYQLS 124
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
            ALAYL     +  V+RD    ++L +  +  K+ DF LS
Sbjct: 125 TALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLS 161

>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
           Q  H HI+KLIG   E P+ I+  E    G LR    S  Q +   L +   +  A  ++
Sbjct: 72  QFDHPHIVKLIGVITENPVWII-MELCTLGELR----SFLQVRKYSLDLASLILYAYQLS 126
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
            ALAYL     +  V+RD    ++L +  +  K+ DF LS
Sbjct: 127 TALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLS 163

>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
           Q  H HI+KLIG   E P+ I+  E    G LR    S  Q +   L +   +  A  ++
Sbjct: 69  QFDHPHIVKLIGVITENPVWII-MELCTLGELR----SFLQVRKYSLDLASLILYAYQLS 123
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
            ALAYL     +  V+RD    ++L +  +  K+ DF LS
Sbjct: 124 TALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLS 160

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 58/116 (50%), Gaps = 14/116 (12%)
Query: 111 AAQMSHDHILKLIGCC-LETP---IPILAFESVEYGNLRDRILSASQPQTE-PLLMKHRL 165
           AA ++H  I+ +      ETP   +P +  E V+   LRD +       TE P+  K  +
Sbjct: 66  AAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIV------HTEGPMTPKRAI 119
Query: 166 KIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTS 221
           ++   IA A   L+F     I++RD K A+I+ +  N  K+ DF ++ +I + G S
Sbjct: 120 EV---IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 172

>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
           Q  H HI+KLIG   E P+ I+  E    G LR    S  Q +   L +   +  A  ++
Sbjct: 67  QFDHPHIVKLIGVITENPVWII-MELCTLGELR----SFLQVRKYSLDLASLILYAYQLS 121
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
            ALAYL     +  V+RD    ++L +  +  K+ DF LS
Sbjct: 122 TALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLS 158

>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
           Q  H HI+KLIG   E P+ I+  E    G LR    S  Q +   L +   +  A  ++
Sbjct: 67  QFDHPHIVKLIGVITENPVWII-MELCTLGELR----SFLQVRKYSLDLASLILYAYQLS 121
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
            ALAYL     +  V+RD    ++L +  +  K+ DF LS
Sbjct: 122 TALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLS 158

>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
           Q  H HI+KLIG   E P+ I+  E    G LR    S  Q +   L +   +  A  ++
Sbjct: 95  QFDHPHIVKLIGVITENPVWII-MELCTLGELR----SFLQVRKYSLDLASLILYAYQLS 149
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
            ALAYL     +  V+RD    ++L +  +  K+ DF LS
Sbjct: 150 TALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLS 186

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/137 (21%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 78  LYKGFWQER--LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA 135
           +Y+G W++    ++V   +E   +     +       ++ H ++++L+G C   P   + 
Sbjct: 236 VYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 294
Query: 136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
            E + YGNL D +   ++ +   +++   L +A  I+ A+ YL     +  ++R+    +
Sbjct: 295 TEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLE---KKNFIHRNLAARN 348
Query: 196 ILFNEENVAKMFDFSLS 212
            L  E ++ K+ DF LS
Sbjct: 349 CLVGENHLVKVADFGLS 365

>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
           Q  H HI+KLIG   E P+ I+  E    G LR    S  Q +   L +   +  A  ++
Sbjct: 64  QFDHPHIVKLIGVITENPVWII-MELCTLGELR----SFLQVRKYSLDLASLILYAYQLS 118
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
            ALAYL     +  V+RD    ++L +  +  K+ DF LS
Sbjct: 119 TALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLS 155

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 58/116 (50%), Gaps = 14/116 (12%)
Query: 111 AAQMSHDHILKLIGCC-LETP---IPILAFESVEYGNLRDRILSASQPQTE-PLLMKHRL 165
           AA ++H  I+ +      ETP   +P +  E V+   LRD +       TE P+  K  +
Sbjct: 66  AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV------HTEGPMTPKRAI 119
Query: 166 KIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTS 221
           ++   IA A   L+F     I++RD K A+I+ +  N  K+ DF ++ +I + G S
Sbjct: 120 EV---IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 172

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 58/116 (50%), Gaps = 14/116 (12%)
Query: 111 AAQMSHDHILKLIGCC-LETP---IPILAFESVEYGNLRDRILSASQPQTE-PLLMKHRL 165
           AA ++H  I+ +      ETP   +P +  E V+   LRD +       TE P+  K  +
Sbjct: 66  AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV------HTEGPMTPKRAI 119
Query: 166 KIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTS 221
           ++   IA A   L+F     I++RD K A+I+ +  N  K+ DF ++ +I + G S
Sbjct: 120 EV---IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 172

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 69/141 (48%), Gaps = 9/141 (6%)
Query: 77  ILYKGFWQERLISVMRFR-ESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA 135
           ++ K  W+ + +++ +   ES R      I  +   ++++H +I+KL G CL  P+  L 
Sbjct: 24  VVCKAKWRAKDVAIKQIESESERKAF---IVELRQLSRVNHPNIVKLYGACL-NPV-CLV 78
Query: 136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
            E  E G+L + +L  ++P        H +   +  +  +AYLH   P+ +++RD K  +
Sbjct: 79  MEYAEGGSLYN-VLHGAEPLPY-YTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPN 136
Query: 196 ILF-NEENVAKMFDFSLSISI 215
           +L      V K+ DF  +  I
Sbjct: 137 LLLVAGGTVLKICDFGTACDI 157

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 69/141 (48%), Gaps = 9/141 (6%)
Query: 77  ILYKGFWQERLISVMRFR-ESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA 135
           ++ K  W+ + +++ +   ES R      I  +   ++++H +I+KL G CL  P+  L 
Sbjct: 23  VVCKAKWRAKDVAIKQIESESERKAF---IVELRQLSRVNHPNIVKLYGACL-NPV-CLV 77
Query: 136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
            E  E G+L + +L  ++P        H +   +  +  +AYLH   P+ +++RD K  +
Sbjct: 78  MEYAEGGSLYN-VLHGAEPLPY-YTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPN 135
Query: 196 ILF-NEENVAKMFDFSLSISI 215
           +L      V K+ DF  +  I
Sbjct: 136 LLLVAGGTVLKICDFGTACDI 156

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 58/116 (50%), Gaps = 14/116 (12%)
Query: 111 AAQMSHDHILKLIGCC-LETP---IPILAFESVEYGNLRDRILSASQPQTE-PLLMKHRL 165
           AA ++H  I+ +      ETP   +P +  E V+   LRD +       TE P+  K  +
Sbjct: 66  AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV------HTEGPMTPKRAI 119
Query: 166 KIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTS 221
           ++   IA A   L+F     I++RD K A+I+ +  N  K+ DF ++ +I + G S
Sbjct: 120 EV---IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 172

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 30/137 (21%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 78  LYKGFWQER--LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA 135
           +Y+G W++    ++V   +E   +     +       ++ H ++++L+G C   P   + 
Sbjct: 275 VYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 333
Query: 136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
            E + YGNL D +   ++ +   +++   L +A  I+ A+ YL     +  ++R+    +
Sbjct: 334 TEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRNLAARN 387
Query: 196 ILFNEENVAKMFDFSLS 212
            L  E ++ K+ DF LS
Sbjct: 388 CLVGENHLVKVADFGLS 404

>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
           Q  H HI+KLIG   E P+ I+  E    G LR    S  Q +   L +   +  A  ++
Sbjct: 67  QFDHPHIVKLIGVITENPVWII-MELCTLGELR----SFLQVRKFSLDLASLILYAYQLS 121
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
            ALAYL     +  V+RD    ++L +  +  K+ DF LS
Sbjct: 122 TALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLS 158

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 10/93 (10%)
Query: 130 PIPILAFESVEYGNLRDRILSASQPQTE-PLLMKHRLKIAMDIAHALAYLHFGFPRPIVY 188
           P+P +  E V+   LRD +       TE P+  K  +++   IA A   L+F     I++
Sbjct: 106 PLPYIVMEYVDGVTLRDIV------HTEGPMTPKRAIEV---IADACQALNFSHQNGIIH 156
Query: 189 RDFKTAHILFNEENVAKMFDFSLSISIPEGGTS 221
           RD K A+I+ +  N  K+ DF ++ +I + G S
Sbjct: 157 RDVKPANIMISATNAVKVMDFGIARAIADSGNS 189

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 20/113 (17%)
Query: 114 MSHDHILKLIGCCLETPIPILAFESVEYGNLRD---------RILSASQPQTEP--LLMK 162
           + H+HI+K  G C +    I+ FE +++G+L            IL   QP+     L + 
Sbjct: 74  LQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLS 133
Query: 163 HRLKIAMDIAHALAYL---HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
             L IA  IA  + YL   HF      V+RD  T + L     + K+ DF +S
Sbjct: 134 QMLHIASQIASGMVYLASQHF------VHRDLATRNCLVGANLLVKIGDFGMS 180

>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
           Q  H HI+KLIG   E P+ I+  E    G LR    S  Q +   L +   +  A  ++
Sbjct: 67  QFDHPHIVKLIGVITENPVWII-MELCTLGELR----SFLQVRKFSLDLASLILYAYQLS 121
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
            ALAYL     +  V+RD    ++L +  +  K+ DF LS
Sbjct: 122 TALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLS 158

>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
           Q  H HI+KLIG   E P+ I+  E    G LR    S  Q +   L +   +  A  ++
Sbjct: 447 QFDHPHIVKLIGVITENPVWII-MELCTLGELR----SFLQVRKFSLDLASLILYAYQLS 501
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
            ALAYL     +  V+RD    ++L +  +  K+ DF LS
Sbjct: 502 TALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLS 538

>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 56/112 (50%), Gaps = 13/112 (11%)
Query: 115 SHDHILKLIGCCLE-----TPIPILAFESVEYGNLRDRILSA---SQPQTEPLLMKHRLK 166
           SH ++++L+G C+E      P P++    ++YG+L   +L +   + P+  PL  +  LK
Sbjct: 94  SHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPL--QTLLK 151
Query: 167 IAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG 218
             +DIA  + YL     R  ++RD    + +  ++    + DF LS  I  G
Sbjct: 152 FMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSG 200

>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
           Q  H HI+KLIG   E P+ I+  E    G LR    S  Q +   L +   +  A  ++
Sbjct: 447 QFDHPHIVKLIGVITENPVWII-MELCTLGELR----SFLQVRKFSLDLASLILYAYQLS 501
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
            ALAYL     +  V+RD    ++L +  +  K+ DF LS
Sbjct: 502 TALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLS 538

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
           ++SH  +++L G CLE     L  E +E+G L D +    + Q      +  L + +D+ 
Sbjct: 59  KLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYL----RTQRGLFAAETLLGMCLDVC 114
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
             +AYL       +++RD    + L  E  V K+ DF ++
Sbjct: 115 EGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMT 151

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 20/128 (15%)
Query: 90  VMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRIL 149
           + +F+E  R+        +   + ++H +I+KL G  +  P P +  E V  G+L  R+L
Sbjct: 64  IEKFQEFQRE--------VFIMSNLNHPNIVKLYGL-MHNP-PRMVMEFVPCGDLYHRLL 113
Query: 150 SASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFN--EENV---A 204
             +     P+    +L++ +DIA  + Y+    P PIV+RD ++ +I     +EN    A
Sbjct: 114 DKAH----PIKWSVKLRLMLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCA 168
Query: 205 KMFDFSLS 212
           K+ DF  S
Sbjct: 169 KVADFGTS 176

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 7/115 (6%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
           Q SH +I++LIG C +     +  E V+ G+     L+  + +   L +K  L++  D A
Sbjct: 168 QYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF----LTFLRTEGARLRVKTLLQMVGDAA 223
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKCLK 227
             + YL     +  ++RD    + L  E+NV K+ DF +S    +G  + +  L+
Sbjct: 224 AGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLR 275

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 57/139 (41%), Gaps = 32/139 (23%)
Query: 102 GSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRD----RILSASQPQTE 157
           GS     VY  +   D  +K++     TP  + AF++ E G LR      IL      T+
Sbjct: 33  GSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNILLFMGYSTK 91
Query: 158 PLL------------------------MKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKT 193
           P L                        MK  + IA   A  + YLH    + I++RD K+
Sbjct: 92  PQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKS 148
Query: 194 AHILFNEENVAKMFDFSLS 212
            +I  +E+N  K+ DF L+
Sbjct: 149 NNIFLHEDNTVKIGDFGLA 167

>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 51/124 (41%), Gaps = 22/124 (17%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQ------------------- 153
           Q++H H++KL G C +    +L  E  +YG+LR  +  + +                   
Sbjct: 82  QVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH 141
Query: 154 PQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSI 213
           P    L M   +  A  I+  + YL       +V+RD    +IL  E    K+ DF LS 
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYLA---EMSLVHRDLAARNILVAEGRKMKISDFGLSR 198
Query: 214 SIPE 217
            + E
Sbjct: 199 DVYE 202

>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 51/124 (41%), Gaps = 22/124 (17%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQ------------------- 153
           Q++H H++KL G C +    +L  E  +YG+LR  +  + +                   
Sbjct: 82  QVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH 141
Query: 154 PQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSI 213
           P    L M   +  A  I+  + YL       +V+RD    +IL  E    K+ DF LS 
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDFGLSR 198
Query: 214 SIPE 217
            + E
Sbjct: 199 DVYE 202

>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 51/124 (41%), Gaps = 22/124 (17%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQ------------------- 153
           Q++H H++KL G C +    +L  E  +YG+LR  +  + +                   
Sbjct: 82  QVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH 141
Query: 154 PQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSI 213
           P    L M   +  A  I+  + YL       +V+RD    +IL  E    K+ DF LS 
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDFGLSR 198
Query: 214 SIPE 217
            + E
Sbjct: 199 DVYE 202

>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Mgatp) Length = 271

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 78/168 (46%), Gaps = 23/168 (13%)
Query: 63  NYDQKNVIT---EDWGCILYKGFWQ--ERLISVMRFRE----SNRDGHGSCINNIVYAAQ 113
           ++ Q N +T   E+    L+KG WQ  + ++ V++ R+     +RD +  C    ++   
Sbjct: 8   DFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIF--- 64
Query: 114 MSHDHILKLIGCCLETPI--PILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
            SH ++L ++G C   P   P L    + YG+L + +   +    +       +K A+D+
Sbjct: 65  -SHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVD---QSQAVKFALDM 120
Query: 172 AHALAYLHFGFPRPIVYRD-FKTAHILFNEENVAK--MFDFSLSISIP 216
           A  +A+LH     P++ R    +  ++ +E+  A+  M D   S   P
Sbjct: 121 ARGMAFLHTL--EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSP 166

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
           Q SH +I++LIG C +     +  E V+ G+     L+  + +   L +K  L++  D A
Sbjct: 168 QYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF----LTFLRTEGARLRVKTLLQMVGDAA 223
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
             + YL     +  ++RD    + L  E+NV K+ DF +S
Sbjct: 224 AGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMS 260

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 57/139 (41%), Gaps = 32/139 (23%)
Query: 102 GSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRD----RILSASQPQTE 157
           GS     VY  +   D  +K++     TP  + AF++ E G LR      IL      T+
Sbjct: 21  GSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNILLFMGYSTK 79
Query: 158 PLL------------------------MKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKT 193
           P L                        MK  + IA   A  + YLH    + I++RD K+
Sbjct: 80  PQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKS 136
Query: 194 AHILFNEENVAKMFDFSLS 212
            +I  +E+N  K+ DF L+
Sbjct: 137 NNIFLHEDNTVKIGDFGLA 155

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 56/139 (40%), Gaps = 32/139 (23%)
Query: 102 GSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRD----RILSASQPQTE 157
           GS     VY  +   D  +K++     TP  + AF++ E G LR      IL      T 
Sbjct: 33  GSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNILLFMGYSTA 91
Query: 158 PLL------------------------MKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKT 193
           P L                        MK  + IA   A  + YLH    + I++RD K+
Sbjct: 92  PQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKS 148
Query: 194 AHILFNEENVAKMFDFSLS 212
            +I  +E+N  K+ DF L+
Sbjct: 149 NNIFLHEDNTVKIGDFGLA 167

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 9/133 (6%)
Query: 87  LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF--ESVEYGNL 144
           +++V + + S  +        I     + HD+I+K  G C       L    E + YG+L
Sbjct: 44  VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 103
Query: 145 RDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVA 204
           RD +    Q   E +     L+    I   + YL  G  R  ++RD  T +IL   EN  
Sbjct: 104 RDYL----QAHAERIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRV 156
Query: 205 KMFDFSLSISIPE 217
           K+ DF L+  +P+
Sbjct: 157 KIGDFGLTKVLPQ 169

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 9/133 (6%)
Query: 87  LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF--ESVEYGNL 144
           +++V + + S  +        I     + HD+I+K  G C       L    E + YG+L
Sbjct: 44  VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 103
Query: 145 RDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVA 204
           RD +    Q   E +     L+    I   + YL  G  R  ++RD  T +IL   EN  
Sbjct: 104 RDYL----QKHKERIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRV 156
Query: 205 KMFDFSLSISIPE 217
           K+ DF L+  +P+
Sbjct: 157 KIGDFGLTKVLPQ 169

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 9/133 (6%)
Query: 87  LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF--ESVEYGNL 144
           +++V + + S  +        I     + HD+I+K  G C       L    E + YG+L
Sbjct: 46  VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 105
Query: 145 RDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVA 204
           RD +    Q   E +     L+    I   + YL  G  R  ++RD  T +IL   EN  
Sbjct: 106 RDYL----QKHKERIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRV 158
Query: 205 KMFDFSLSISIPE 217
           K+ DF L+  +P+
Sbjct: 159 KIGDFGLTKVLPQ 171

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 9/133 (6%)
Query: 87  LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF--ESVEYGNL 144
           +++V + + S  +        I     + HD+I+K  G C       L    E + YG+L
Sbjct: 48  VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 107
Query: 145 RDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVA 204
           RD +    Q   E +     L+    I   + YL  G  R  ++RD  T +IL   EN  
Sbjct: 108 RDYL----QKHKERIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRV 160
Query: 205 KMFDFSLSISIPE 217
           K+ DF L+  +P+
Sbjct: 161 KIGDFGLTKVLPQ 173

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 9/133 (6%)
Query: 87  LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF--ESVEYGNL 144
           +++V + + S  +        I     + HD+I+K  G C       L    E + YG+L
Sbjct: 47  VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 106
Query: 145 RDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVA 204
           RD +    Q   E +     L+    I   + YL  G  R  ++RD  T +IL   EN  
Sbjct: 107 RDYL----QKHKERIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRV 159
Query: 205 KMFDFSLSISIPE 217
           K+ DF L+  +P+
Sbjct: 160 KIGDFGLTKVLPQ 172

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 9/133 (6%)
Query: 87  LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF--ESVEYGNL 144
           +++V + + S  +        I     + HD+I+K  G C       L    E + YG+L
Sbjct: 41  VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 100
Query: 145 RDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVA 204
           RD +    Q   E +     L+    I   + YL  G  R  ++RD  T +IL   EN  
Sbjct: 101 RDYL----QKHKERIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRV 153
Query: 205 KMFDFSLSISIPE 217
           K+ DF L+  +P+
Sbjct: 154 KIGDFGLTKVLPQ 166

>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine Receptor Tyrosine Kinase Tyro3 (Sky) Length = 323

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 12/121 (9%)
Query: 113 QMSHDHILKLIGCCLET------PIPILAFESVEYGNLRDRILSASQPQTEP--LLMKHR 164
           +  H H+ KL+G  L +      PIP++    +++G+L   +L AS+    P  L ++  
Sbjct: 81  EFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLL-ASRIGENPFNLPLQTL 139
Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAK 224
           ++  +DIA  + YL     R  ++RD    + +  E+    + DF LS  I  G      
Sbjct: 140 VRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQG 196
Query: 225 C 225
           C
Sbjct: 197 C 197

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 9/133 (6%)
Query: 87  LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF--ESVEYGNL 144
           +++V + + S  +        I     + HD+I+K  G C       L    E + YG+L
Sbjct: 59  VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 118
Query: 145 RDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVA 204
           RD +    Q   E +     L+    I   + YL  G  R  ++RD  T +IL   EN  
Sbjct: 119 RDYL----QKHKERIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRV 171
Query: 205 KMFDFSLSISIPE 217
           K+ DF L+  +P+
Sbjct: 172 KIGDFGLTKVLPQ 184

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 9/133 (6%)
Query: 87  LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF--ESVEYGNL 144
           +++V + + S  +        I     + HD+I+K  G C       L    E + YG+L
Sbjct: 40  VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 99
Query: 145 RDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVA 204
           RD +    Q   E +     L+    I   + YL  G  R  ++RD  T +IL   EN  
Sbjct: 100 RDYL----QKHKERIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRV 152
Query: 205 KMFDFSLSISIPE 217
           K+ DF L+  +P+
Sbjct: 153 KIGDFGLTKVLPQ 165

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 9/133 (6%)
Query: 87  LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF--ESVEYGNL 144
           +++V + + S  +        I     + HD+I+K  G C       L    E + YG+L
Sbjct: 41  VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 100
Query: 145 RDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVA 204
           RD +    Q   E +     L+    I   + YL  G  R  ++RD  T +IL   EN  
Sbjct: 101 RDYL----QKHKERIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRV 153
Query: 205 KMFDFSLSISIPE 217
           K+ DF L+  +P+
Sbjct: 154 KIGDFGLTKVLPQ 166

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 9/133 (6%)
Query: 87  LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF--ESVEYGNL 144
           +++V + + S  +        I     + HD+I+K  G C       L    E + YG+L
Sbjct: 59  VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 118
Query: 145 RDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVA 204
           RD +    Q   E +     L+    I   + YL  G  R  ++RD  T +IL   EN  
Sbjct: 119 RDYL----QKHKERIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRV 171
Query: 205 KMFDFSLSISIPE 217
           K+ DF L+  +P+
Sbjct: 172 KIGDFGLTKVLPQ 184

>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/108 (25%), Positives = 53/108 (49%), Gaps = 11/108 (10%)
Query: 116 HDHILKLIGCCLETPIPILAF-ESVEYGNL-------RDRILSASQPQTEPLLMKHRLKI 167
           H +++ L+G C +   P++   E  ++GNL       R+  +       + L ++H +  
Sbjct: 90  HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXY 149
Query: 168 AMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
           +  +A  + +L     R  ++RD    +IL +E+NV K+ DF L+  I
Sbjct: 150 SFQVAKGMEFLA---SRKXIHRDLAARNILLSEKNVVKIXDFGLARDI 194

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 9/133 (6%)
Query: 87  LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF--ESVEYGNL 144
           +++V + + S  +        I     + HD+I+K  G C       L    E + YG+L
Sbjct: 39  VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 98
Query: 145 RDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVA 204
           RD +    Q   E +     L+    I   + YL  G  R  ++RD  T +IL   EN  
Sbjct: 99  RDYL----QKHKERIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRV 151
Query: 205 KMFDFSLSISIPE 217
           K+ DF L+  +P+
Sbjct: 152 KIGDFGLTKVLPQ 164

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 9/133 (6%)
Query: 87  LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF--ESVEYGNL 144
           +++V + + S  +        I     + HD+I+K  G C       L    E + YG+L
Sbjct: 72  VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 131
Query: 145 RDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVA 204
           RD +    Q   E +     L+    I   + YL  G  R  ++RD  T +IL   EN  
Sbjct: 132 RDYL----QKHKERIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRV 184
Query: 205 KMFDFSLSISIPE 217
           K+ DF L+  +P+
Sbjct: 185 KIGDFGLTKVLPQ 197

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 9/133 (6%)
Query: 87  LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF--ESVEYGNL 144
           +++V + + S  +        I     + HD+I+K  G C       L    E + YG+L
Sbjct: 41  VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 100
Query: 145 RDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVA 204
           RD +    Q   E +     L+    I   + YL  G  R  ++RD  T +IL   EN  
Sbjct: 101 RDYL----QKHKERIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRV 153
Query: 205 KMFDFSLSISIPE 217
           K+ DF L+  +P+
Sbjct: 154 KIGDFGLTKVLPQ 166

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 9/133 (6%)
Query: 87  LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF--ESVEYGNL 144
           +++V + + S  +        I     + HD+I+K  G C       L    E + YG+L
Sbjct: 45  VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 104
Query: 145 RDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVA 204
           RD +    Q   E +     L+    I   + YL  G  R  ++RD  T +IL   EN  
Sbjct: 105 RDYL----QKHKERIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRV 157
Query: 205 KMFDFSLSISIPE 217
           K+ DF L+  +P+
Sbjct: 158 KIGDFGLTKVLPQ 170

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
           Q+ H  +++L     + PI I+  E +E G+L D +     P    L +   L +A  IA
Sbjct: 59  QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIA 114
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
             +A++     R  ++RD + A+IL ++    K+ DF L+
Sbjct: 115 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLA 151

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 7/101 (6%)
Query: 113 QMSHDHILKLIGCCLETPIPI-LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
           Q+ H ++++L+G  +E    + +  E +  G+L D + S  +     L     LK ++D+
Sbjct: 70  QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR---SVLGGDCLLKFSLDV 126
Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
             A+ YL        V+RD    ++L +E+NVAK+ DF L+
Sbjct: 127 CEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLT 164

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
           Q+ H  +++L     + PI I+  E +E G+L D +     P    L +   L +A  IA
Sbjct: 64  QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIA 119
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
             +A++     R  ++RD + A+IL ++    K+ DF L+
Sbjct: 120 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLA 156

>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 14/111 (12%)
Query: 116 HDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQP-----------QTEPLLMKHR 164
           H +I+ L+G C +     +  E    GNLR+ + +   P             E L  K  
Sbjct: 93  HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
           +  A  +A  + YL     +  ++RD    ++L  E+NV K+ DF L+  I
Sbjct: 153 VSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 200

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	241
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	3e-35
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	1e-26
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	3e-25
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	4e-22
3soc_A	322	Activin receptor type-2A; structural genomics cons	1e-21
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	4e-19
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	4e-19
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	2e-17
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	2e-17
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	6e-17
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	2e-16
3q4u_A	301	Activin receptor type-1; structural genomics conso	4e-16
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	4e-16
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	6e-16
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	7e-16
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	2e-15
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	2e-14
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	2e-13
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	2e-13
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	6e-13
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	1e-12
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	2e-12
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	2e-12
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	4e-12
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	5e-12
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	6e-12
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	6e-12
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	6e-12
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	6e-12
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	6e-12
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	8e-12
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	8e-12
3pls_A	298	Macrophage-stimulating protein receptor; protein k	8e-12
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	1e-11
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	1e-11
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	1e-11
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	1e-11
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	1e-11
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	1e-11
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	1e-11
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	1e-11
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	1e-11
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	2e-11
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	2e-11
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	2e-11
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	2e-11
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	2e-11
4aoj_A	329	High affinity nerve growth factor receptor; transf	2e-11
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	2e-11
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	2e-11
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	3e-11
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	3e-11
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	3e-11
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	3e-11
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	4e-11
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	4e-11
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	5e-11
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	6e-11
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	6e-11
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	7e-11
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	8e-11
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	9e-11
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	9e-11
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	1e-10
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	1e-10
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	1e-10
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	4e-10
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	7e-10
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	1e-09
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	3e-09
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	4e-09
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	9e-09
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	2e-08
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	5e-08
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	7e-08
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	9e-08
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	3e-07
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	3e-07
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	4e-07
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	5e-07
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	5e-07
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	8e-07
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	2e-06
3ork_A	311	Serine/threonine protein kinase; structural genomi	2e-06
2a19_B	284	Interferon-induced, double-stranded RNA-activated	2e-06
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	3e-06
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	4e-06
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	6e-06
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	8e-06
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	1e-05
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	1e-05
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	1e-05
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	2e-05
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	2e-05
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	3e-05
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	3e-05
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	3e-05
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	3e-05
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	5e-05
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	8e-05
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	1e-04
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	1e-04
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	1e-04
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	1e-04
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	2e-04
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	2e-04
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	3e-04
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	3e-04
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	3e-04
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	4e-04
3an0_A	340	Dual specificity mitogen-activated protein kinase;	4e-04
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	4e-04
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	4e-04
3fme_A	290	Dual specificity mitogen-activated protein kinase;	4e-04
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	4e-04
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	4e-04
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	4e-04
2dyl_A	318	Dual specificity mitogen-activated protein kinase	4e-04
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	5e-04
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	6e-04
3aln_A	327	Dual specificity mitogen-activated protein kinase;	6e-04
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	9e-04

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  126 bits (320), Expect = 3e-35
 Identities = 54/194 (27%), Positives = 90/194 (46%), Gaps = 7/194 (3%)

Query: 30  NGASVLKELIASSNGKYNPYRIFSAQELKLATNNYDQKNVITE-DWGCILYKGFWQE-RL 87
              + + + ++SS             +L+ ATNN+D K +I    +G + YKG  ++   
Sbjct: 7   KATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKV-YKGVLRDGAK 65

Query: 88  ISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDR 147
           +++ R    +  G       I   +   H H++ LIG C E    IL ++ +E GNL+  
Sbjct: 66  VALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRH 125

Query: 148 ILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMF 207
            L  S   T  +  + RL+I +  A  L YLH      I++RD K+ +IL +E  V K+ 
Sbjct: 126 -LYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKIT 181

Query: 208 DFSLSISIPEGGTS 221
           DF +S    E   +
Sbjct: 182 DFGISKKGTELDQT 195

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  103 bits (260), Expect = 1e-26
 Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 17/183 (9%)

Query: 50  RIFSAQELKLATNNYDQKNVITEDW-------GCILYKGFWQERLISVMRFRESNRD--- 99
             FS  ELK  TNN+D++ +            G + YKG+     ++V +          
Sbjct: 13  HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVV-YKGYVNNTTVAVKKLAAMVDITTE 71

Query: 100 -GHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEP 158
                    I   A+  H+++++L+G   +     L +  +  G+L DR+       T P
Sbjct: 72  ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC--LDGTPP 129

Query: 159 LLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG 218
           L    R KIA   A+ + +LH       ++RD K+A+IL +E   AK+ DF L+ +  + 
Sbjct: 130 LSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKF 186

Query: 219 GTS 221
             +
Sbjct: 187 AQT 189

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  100 bits (251), Expect = 3e-25
 Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 17/180 (9%)

Query: 50  RIFSAQELKLATNNYDQKNVITE-DWGCILYKGFWQE-RLISVMRFRESNRDGHGS---- 103
           + FS +EL++A++N+  KN++    +G + YKG   +  L++V R +E    G       
Sbjct: 18  KRFSLRELQVASDNFSNKNILGRGGFGKV-YKGRLADGTLVAVKRLKEERTQGGELQFQT 76

Query: 104 ---CINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLL 160
               I+  V      H ++L+L G C+     +L +  +  G++    L        PL 
Sbjct: 77  EVEMISMAV------HRNLLRLRGFCMTPTERLLVYPYMANGSV-ASCLRERPESQPPLD 129

Query: 161 MKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGT 220
              R +IA+  A  LAYLH      I++RD K A+IL +EE  A + DF L+  +    T
Sbjct: 130 WPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT 189

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 90.8 bits (226), Expect = 4e-22
 Identities = 30/149 (20%), Positives = 57/149 (38%), Gaps = 8/149 (5%)

Query: 78  LYKGFWQERLISV--MRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA 135
           L+KG WQ   I V  ++ R+ +                 SH ++L ++G C   P P   
Sbjct: 26  LWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPT 85

Query: 136 F--ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKT 193
                + YG+L + +          +     +K A+D+A  +A+LH      I      +
Sbjct: 86  LITHWMPYGSLYNVLHE---GTNFVVDQSQAVKFALDMARGMAFLH-TLEPLIPRHALNS 141

Query: 194 AHILFNEENVAKMFDFSLSISIPEGGTSG 222
             ++ +E+  A++    +  S    G   
Sbjct: 142 RSVMIDEDMTARISMADVKFSFQSPGRMY 170

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 90.5 bits (225), Expect = 1e-21
 Identities = 36/182 (19%), Positives = 63/182 (34%), Gaps = 18/182 (9%)

Query: 52  FSAQELKLATNNYDQKNVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYA 111
              + L   +       V        ++K       ++V  F   ++         +   
Sbjct: 14  LGTENLYFQSMPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQDKQSW-QNEYEVYSL 72

Query: 112 AQMSHDHILKLIGCCLETPIP----ILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKI 167
             M H++IL+ IG             L     E G+L D +      +   +       I
Sbjct: 73  PGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL------KANVVSWNELCHI 126

Query: 168 AMDIAHALAYLH------FGFPRP-IVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGT 220
           A  +A  LAYLH          +P I +RD K+ ++L      A + DF L++    G +
Sbjct: 127 AETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKS 186

Query: 221 SG 222
           +G
Sbjct: 187 AG 188

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 83.5 bits (207), Expect = 4e-19
 Identities = 34/149 (22%), Positives = 66/149 (44%), Gaps = 9/149 (6%)

Query: 77  ILYKGFWQERLISVMRFR-ESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA 135
           ++ K  W+ + +++ +   ES R      +  +   ++++H +I+KL G CL      L 
Sbjct: 23  VVCKAKWRAKDVAIKQIESESERKAFIVELRQL---SRVNHPNIVKLYGACLNPVC--LV 77

Query: 136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
            E  E G+L + +  A           H +   +  +  +AYLH   P+ +++RD K  +
Sbjct: 78  MEYAEGGSLYNVLHGAEPL--PYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPN 135

Query: 196 ILFNEEN-VAKMFDFSLSISIPEGGTSGA 223
           +L      V K+ DF  +  I    T+  
Sbjct: 136 LLLVAGGTVLKICDFGTACDIQTHMTNNK 164

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 82.7 bits (205), Expect = 4e-19
 Identities = 37/159 (23%), Positives = 63/159 (39%), Gaps = 18/159 (11%)

Query: 78  LYKGFWQERLISVMRFRESNRDGHGSCINNIVY-AAQMS---HDHILKLIGCCLETPIPI 133
           +Y+ FW    ++V   R    +     I N+   A   +   H +I+ L G CL+ P   
Sbjct: 23  VYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLC 82

Query: 134 LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKT 193
           L  E    G L   +        + +     +  A+ IA  + YLH     PI++RD K+
Sbjct: 83  LVMEFARGGPLNRVL------SGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKS 136

Query: 194 AHILFNEE--------NVAKMFDFSLSISIPEGGTSGAK 224
           ++IL  ++         + K+ DF L+          A 
Sbjct: 137 SNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAA 175

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 78.7 bits (194), Expect = 2e-17
 Identities = 44/176 (25%), Positives = 65/176 (36%), Gaps = 26/176 (14%)

Query: 52  FSAQELKLATNNYDQKNVITEDWGC--ILYKGFWQERLISVMRFRESNRDGHGSCIN--N 107
            +A E  L  +N     +I    G    +YKG   ER ++V  F  +NR    + IN  N
Sbjct: 3   AAASEPSLDLDNLKLLELIGR--GRYGAVYKGSLDERPVAVKVFSFANRQ---NFINEKN 57

Query: 108 IVYAAQMSHDHILKLIGCCLETPIPI-----LAFESVEYGNLRDRILSASQPQTEPLLMK 162
           I     M HD+I + I               L  E    G+L   +              
Sbjct: 58  IYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL------SLHTSDWV 111

Query: 163 HRLKIAMDIAHALAYLHFGFPR------PIVYRDFKTAHILFNEENVAKMFDFSLS 212
              ++A  +   LAYLH   PR       I +RD  + ++L   +    + DF LS
Sbjct: 112 SSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLS 167

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 78.5 bits (194), Expect = 2e-17
 Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 9/139 (6%)

Query: 78  LYKGFWQERLISVMRFRESNRDGHGSCINNIVY-AAQMS---HDHILKLIGCCLETPIPI 133
           +++  W    ++V    E   D H   +N  +   A M    H +I+  +G   + P   
Sbjct: 53  VHRAEWHGSDVAVKILMEQ--DFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLS 110

Query: 134 LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKT 193
           +  E +  G+L   +  +     E L  + RL +A D+A  + YLH     PIV+R+ K+
Sbjct: 111 IVTEYLSRGSLYRLLHKSGAR--EQLDERRRLSMAYDVAKGMNYLH-NRNPPIVHRNLKS 167

Query: 194 AHILFNEENVAKMFDFSLS 212
            ++L +++   K+ DF LS
Sbjct: 168 PNLLVDKKYTVKVCDFGLS 186

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 77.5 bits (191), Expect = 6e-17
 Identities = 32/164 (19%), Positives = 57/164 (34%), Gaps = 20/164 (12%)

Query: 78  LYKGFWQERLISVMRFRESNRDGHGSCIN--NIVYAAQMSHDHILKLIGCCLETPIPI-- 133
           ++ G W+   ++V  F  +      S      I     M H++IL  I   ++       
Sbjct: 53  VWMGKWRGEKVAVKVFFTTEEA---SWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQ 109

Query: 134 --LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPR-----PI 186
             L  +  E G+L D +      ++  L  K  LK+A      L +LH           I
Sbjct: 110 LYLITDYHENGSLYDYL------KSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAI 163

Query: 187 VYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSER 230
            +RD K+ +IL  +     + D  L++              +  
Sbjct: 164 AHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRV 207

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 76.0 bits (187), Expect = 2e-16
 Identities = 30/146 (20%), Positives = 57/146 (39%), Gaps = 20/146 (13%)

Query: 78  LYKGFWQERLISVMRFRESNRDGHGSCIN--NIVYAAQMSHDHILKLIGCCLETPIPI-- 133
           +++G W+   ++V  F         S      I     + H++IL  I    +       
Sbjct: 58  VWRGKWRGEEVAVKIFSSREER---SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ 114

Query: 134 --LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPR-----PI 186
             L  +  E+G+L D +          + ++  +K+A+  A  LA+LH           I
Sbjct: 115 LWLVSDYHEHGSLFDYL------NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAI 168

Query: 187 VYRDFKTAHILFNEENVAKMFDFSLS 212
            +RD K+ +IL  +     + D  L+
Sbjct: 169 AHRDLKSKNILVKKNGTCCIADLGLA 194

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 75.1 bits (185), Expect = 4e-16
 Identities = 33/163 (20%), Positives = 58/163 (35%), Gaps = 20/163 (12%)

Query: 78  LYKGFWQERLISVMRFRESNRDGHGSCIN--NIVYAAQMSHDHILKLIGCCLETPIPI-- 133
           +++G WQ   ++V  F   +     S      +     + H++IL  I   + +      
Sbjct: 24  VWRGSWQGENVAVKIFSSRDEK---SWFRETELYNTVMLRHENILGFIASDMTSRHSSTQ 80

Query: 134 --LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLH-----FGFPRPI 186
             L     E G+L D +      Q   L     L+I + IA  LA+LH           I
Sbjct: 81  LWLITHYHEMGSLYDYL------QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAI 134

Query: 187 VYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSE 229
            +RD K+ +IL  +     + D  L++   +            
Sbjct: 135 AHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPR 177

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 74.7 bits (184), Expect = 4e-16
 Identities = 37/149 (24%), Positives = 62/149 (41%), Gaps = 21/149 (14%)

Query: 78  LYKGFWQERLISVM--RFRESNRDGHGSCINNIVY----AAQMS---HDHILKLIGCCLE 128
           ++KG   +    V        + +G    I            MS   H +I+KL G    
Sbjct: 35  VHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHN 94

Query: 129 TPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVY 188
            P  ++  E V  G+L  R+L     +  P+    +L++ +DIA  + Y+      PIV+
Sbjct: 95  PPRMVM--EFVPCGDLYHRLLD----KAHPIKWSVKLRLMLDIALGIEYMQ-NQNPPIVH 147

Query: 189 RDFKTAHILFNEEN-----VAKMFDFSLS 212
           RD ++ +I     +      AK+ DF LS
Sbjct: 148 RDLRSPNIFLQSLDENAPVCAKVADFGLS 176

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 74.3 bits (183), Expect = 7e-16
 Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 9/110 (8%)

Query: 113 QMSHDHILKLIG-CCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
            + H ++LK IG    +  +  +  E ++ G LR  I S             R+  A DI
Sbjct: 63  CLEHPNVLKFIGVLYKDKRLNFIT-EYIKGGTLRGIIKS----MDSQYPWSQRVSFAKDI 117

Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTS 221
           A  +AYLH      I++RD  + + L  E     + DF L+  + +  T 
Sbjct: 118 ASGMAYLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQ 164

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 72.7 bits (179), Expect = 2e-15
 Identities = 30/131 (22%), Positives = 51/131 (38%), Gaps = 30/131 (22%)

Query: 82  FWQERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEY 141
           F  E  + V+R                    +  H +IL  +G      + I+  +  E 
Sbjct: 67  FKNE--VGVLR--------------------KTRHVNILLFMGYSTAPQLAIVT-QWCEG 103

Query: 142 GNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEE 201
            +L   +            MK  + IA   A  + YLH    + I++RD K+ +I  +E+
Sbjct: 104 SSLYHHL----HASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHED 156

Query: 202 NVAKMFDFSLS 212
           N  K+ DF L+
Sbjct: 157 NTVKIGDFGLA 167

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 67.4 bits (165), Expect = 2e-13
 Identities = 20/101 (19%), Positives = 44/101 (43%), Gaps = 8/101 (7%)

Query: 112 AQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
            Q  H++++  +G C+  P   +     +   L   +    +     L +    +IA +I
Sbjct: 84  RQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVV----RDAKIVLDVNKTRQIAQEI 139

Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
              + YLH    + I+++D K+ ++ ++   V  + DF L 
Sbjct: 140 VKGMGYLH---AKGILHKDLKSKNVFYDNGKV-VITDFGLF 176

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 67.3 bits (165), Expect = 2e-13
 Identities = 23/105 (21%), Positives = 50/105 (47%), Gaps = 8/105 (7%)

Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRD-----RILSASQPQTEPLLMKHRLKI 167
           + +  H+++L+G   +    ++  E +  G+L+      R   A+ P   P  +   +++
Sbjct: 84  EFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQM 143

Query: 168 AMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
           A +IA  +AYL+       V+RD    + +  E+   K+ DF ++
Sbjct: 144 AGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMT 185

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 66.1 bits (162), Expect = 6e-13
 Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 9/107 (8%)

Query: 113 QMSHDHILKLIG-CCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
           Q SH +I++LIG C  + PI I+  E V+ G+    +    + +   L +K  L++  D 
Sbjct: 168 QYSHPNIVRLIGVCTQKQPIYIV-MELVQGGDFLTFL----RTEGARLRVKTLLQMVGDA 222

Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG 218
           A  + YL     +  ++RD    + L  E+NV K+ DF +S    +G
Sbjct: 223 AAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADG 266

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 65.0 bits (159), Expect = 1e-12
 Identities = 26/109 (23%), Positives = 54/109 (49%), Gaps = 15/109 (13%)

Query: 113 QMSHDHILKLIGCCLET-----PIPILAFESVEYGNLRDRILSAS-QPQTEPLLMKHRLK 166
             SH ++++L+G C+E      P P++    ++YG+L   +L +  +   + + ++  LK
Sbjct: 92  DFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLK 151

Query: 167 IAMDIAHALAYL---HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
             +DIA  + YL   +F      ++RD    + +  ++    + DF LS
Sbjct: 152 FMVDIALGMEYLSNRNF------LHRDLAARNCMLRDDMTVCVADFGLS 194

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 64.7 bits (158), Expect = 2e-12
 Identities = 26/110 (23%), Positives = 52/110 (47%), Gaps = 16/110 (14%)

Query: 113 QMSHDHILKLIGCCLE------TPIPILAFESVEYGNLRDRILSASQPQT-EPLLMKHRL 165
           +  H H+ KL+G  L        PIP++    +++G+L   +L++   +    L ++  +
Sbjct: 81  EFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLV 140

Query: 166 KIAMDIAHALAYL---HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
           +  +DIA  + YL   +F      ++RD    + +  E+    + DF LS
Sbjct: 141 RFMVDIACGMEYLSSRNF------IHRDLAARNCMLAEDMTVCVADFGLS 184

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 64.6 bits (158), Expect = 2e-12
 Identities = 25/120 (20%), Positives = 46/120 (38%), Gaps = 18/120 (15%)

Query: 112 AQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
           A + + H+ +L+G CL + + ++  + + +G L D +           L    L   + I
Sbjct: 72  ASVDNPHVCRLLGICLTSTVQLI-TQLMPFGCLLDYVREHKDNIGSQYL----LNWCVQI 126

Query: 172 AHALAYL---HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG----GTSGAK 224
           A  + YL           V+RD    ++L       K+ DF L+  +          G K
Sbjct: 127 AKGMNYLEDRRL------VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 63.4 bits (155), Expect = 4e-12
 Identities = 24/113 (21%), Positives = 50/113 (44%), Gaps = 21/113 (18%)

Query: 115 SHDHILKLIGCCLETPIPILA-FESVEYGNLRD-----------RILSASQPQTEPLLMK 162
            H +++ L+G C +   P++   E  ++GNL               ++      + L ++
Sbjct: 89  HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 148

Query: 163 HRLKIAMDIAHALAYL---HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
           H +  +  +A  + +L           ++RD    +IL +E+NV K+ DF L+
Sbjct: 149 HLICYSFQVAKGMEFLASRKC------IHRDLAARNILLSEKNVVKICDFGLA 195

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 63.1 bits (154), Expect = 5e-12
 Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 9/109 (8%)

Query: 112 AQMSHDHILKLIGCCLETPI-PI-LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAM 169
             + H++I+K  G C E     I L  E +  G+L++ +                LK A+
Sbjct: 78  RNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQ----LKYAV 133

Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG 218
            I   + YL     R  V+RD    ++L   E+  K+ DF L+ +I   
Sbjct: 134 QICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETD 179

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 63.1 bits (154), Expect = 6e-12
 Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 13/110 (11%)

Query: 112 AQMSHDHILKLIGCCLET---PIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIA 168
             + H+HI+K  GCC +     + ++  E V  G+LRD +          + +   L  A
Sbjct: 88  RTLYHEHIIKYKGCCEDAGAASLQLV-MEYVPLGSLRDYL------PRHSIGLAQLLLFA 140

Query: 169 MDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG 218
             I   +AYLH    +  ++RD    ++L + + + K+ DF L+ ++PEG
Sbjct: 141 QQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 187

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 62.6 bits (153), Expect = 6e-12
 Identities = 29/119 (24%), Positives = 55/119 (46%), Gaps = 18/119 (15%)

Query: 113 QMSHDHILKLIGCCL-ETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
           ++SH  +++L G CL + PI ++  E +E+G L D  L   +        +  L + +D+
Sbjct: 59  KLSHPKLVQLYGVCLEQAPICLV-TEFMEHGCLSD-YLRTQRGL---FAAETLLGMCLDV 113

Query: 172 AHALAYL---HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG---GTSGAK 224
              +AYL           ++RD    + L  E  V K+ DF ++  + +     ++G K
Sbjct: 114 CEGMAYLEEACV------IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK 166

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 63.6 bits (155), Expect = 6e-12
 Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 11/102 (10%)

Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRD--RILSASQPQTEPLLMKHRLKIAMD 170
            + HD ++KL     + PI I+  E +  G+L D  +       +     +   +  +  
Sbjct: 239 TLQHDKLVKLHAVVTKEPIYII-TEFMAKGSLLDFLK-----SDEGSKQPLPKLIDFSAQ 292

Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
           IA  +A++     R  ++RD + A+IL +   V K+ DF L+
Sbjct: 293 IAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLA 331

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 62.6 bits (153), Expect = 6e-12
 Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 17/105 (16%)

Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRD--RILSASQPQTEPLLMKHRLKIAMD 170
           Q+ H  +++L     + PI I+  E +E G+L D  +      P    L +   L +A  
Sbjct: 64  QLQHQRLVRLYAVVTQEPIYII-TEYMENGSLVDFLK-----TPSGIKLTINKLLDMAAQ 117

Query: 171 IAHALAYL---HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
           IA  +A++   ++      ++RD + A+IL ++    K+ DF L+
Sbjct: 118 IAEGMAFIEERNY------IHRDLRAANILVSDTLSCKIADFGLA 156

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 62.6 bits (153), Expect = 6e-12
 Identities = 35/118 (29%), Positives = 51/118 (43%), Gaps = 17/118 (14%)

Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
           Q  H HI+KLIG   E P+ I+  E    G LR   L   +     L +   +  A  ++
Sbjct: 72  QFDHPHIVKLIGVITENPVWII-MELCTLGELRSF-LQVRKYS---LDLASLILYAYQLS 126

Query: 173 HALAYL---HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGG---TSGAK 224
            ALAYL    F      V+RD    ++L +  +  K+ DF LS  + +      S  K
Sbjct: 127 TALAYLESKRF------VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 178

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 62.8 bits (153), Expect = 8e-12
 Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 11/110 (10%)

Query: 112 AQMSHDHILKLIGCCLET---PIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIA 168
             + HD+I+K  G C       + ++  E + YG+LRD  L   + +   +     L+  
Sbjct: 97  KSLQHDNIVKYKGVCYSAGRRNLKLI-MEYLPYGSLRDY-LQKHKER---IDHIKLLQYT 151

Query: 169 MDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG 218
             I   + YL     +  ++RD  T +IL   EN  K+ DF L+  +P+ 
Sbjct: 152 SQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 198

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 62.7 bits (153), Expect = 8e-12
 Identities = 25/112 (22%), Positives = 43/112 (38%), Gaps = 20/112 (17%)

Query: 115 SHDHILKLIGCCLETPIPILAFESVEYGNLRD-----------RILSASQPQTEPLLMKH 163
            H +I+ L+G C +     +  E    GNLR+                ++   E +  K 
Sbjct: 99  KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158

Query: 164 RLKIAMDIAHALAYL---HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
            +     +A  + YL           ++RD    ++L  E NV K+ DF L+
Sbjct: 159 LVSCTYQLARGMEYLASQKC------IHRDLAARNVLVTENNVMKIADFGLA 204

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 62.7 bits (153), Expect = 8e-12
 Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 14/104 (13%)

Query: 113 QMSHDHILKLIGCCLET-PIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
            ++H ++L LIG  L    +P +    + +G+L   I S  +  T   L    +   + +
Sbjct: 78  GLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDL----ISFGLQV 133

Query: 172 AHALAYL---HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
           A  + YL    F      V+RD    + + +E    K+ DF L+
Sbjct: 134 ARGMEYLAEQKF------VHRDLAARNCMLDESFTVKVADFGLA 171

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 62.3 bits (152), Expect = 1e-11
 Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 14/108 (12%)

Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRD--RILSASQPQTEPLLMKHRLKIAMD 170
           + +H +I++ IG  L++    +  E +  G+L+   R       Q   L M   L +A D
Sbjct: 89  KFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 148

Query: 171 IAHALAYL---HFGFPRPIVYRDFKTAHIL---FNEENVAKMFDFSLS 212
           IA    YL   HF      ++RD    + L        VAK+ DF ++
Sbjct: 149 IACGCQYLEENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMA 190

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 62.3 bits (152), Expect = 1e-11
 Identities = 25/120 (20%), Positives = 46/120 (38%), Gaps = 18/120 (15%)

Query: 112 AQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
           A + + H+ +L+G CL + + ++  + + +G L D +           L    L   + I
Sbjct: 72  ASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL----LNWCVQI 126

Query: 172 AHALAYL---HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGG----TSGAK 224
           A  + YL           V+RD    ++L       K+ DF L+  +          G K
Sbjct: 127 AKGMNYLEDRRL------VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 61.9 bits (151), Expect = 1e-11
 Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 11/110 (10%)

Query: 112 AQMSHDHILKLIGCCLET---PIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIA 168
             + HD+I+K  G C       + ++  E + YG+LRD  L   + +   +     L+  
Sbjct: 66  KSLQHDNIVKYKGVCYSAGRRNLKLI-MEYLPYGSLRDY-LQKHKER---IDHIKLLQYT 120

Query: 169 MDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG 218
             I   + YL     +  ++RD  T +IL   EN  K+ DF L+  +P+ 
Sbjct: 121 SQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 167

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 62.4 bits (152), Expect = 1e-11
 Identities = 25/112 (22%), Positives = 43/112 (38%), Gaps = 20/112 (17%)

Query: 115 SHDHILKLIGCCLETPIPILAFESVEYGNLRD-----------RILSASQPQTEPLLMKH 163
            H +I+ L+G C +     +  E    GNLR+                ++   E +  K 
Sbjct: 145 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 204

Query: 164 RLKIAMDIAHALAYL---HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
            +     +A  + YL           ++RD    ++L  E NV K+ DF L+
Sbjct: 205 LVSCTYQLARGMEYLASQKC------IHRDLAARNVLVTENNVMKIADFGLA 250

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 62.3 bits (152), Expect = 1e-11
 Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 18/120 (15%)

Query: 112 AQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
             + H HI++L+G C  + + ++  + +  G+L D +          LL    L   + I
Sbjct: 70  GSLDHAHIVRLLGLCPGSSLQLV-TQYLPLGSLLDHVRQHRGALGPQLL----LNWGVQI 124

Query: 172 AHALAYL---HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGG----TSGAK 224
           A  + YL           V+R+    ++L    +  ++ DF ++  +P        S AK
Sbjct: 125 AKGMYYLEEHGM------VHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAK 178

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 61.9 bits (151), Expect = 1e-11
 Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 18/119 (15%)

Query: 113 QMSHDHILKLIGCCL-ETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
            +SH+ +++L G C  + PI I+  E +  G L +  L   + +      +  L++  D+
Sbjct: 75  NLSHEKLVQLYGVCTKQRPIFII-TEYMANGCLLN-YLREMRHR---FQTQQLLEMCKDV 129

Query: 172 AHALAYL---HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG---GTSGAK 224
             A+ YL    F      ++RD    + L N++ V K+ DF LS  + +     + G+K
Sbjct: 130 CEAMEYLESKQF------LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSK 182

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 61.9 bits (151), Expect = 1e-11
 Identities = 25/121 (20%), Positives = 49/121 (40%), Gaps = 19/121 (15%)

Query: 112 AQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
             + H ++++L G  L  P+ ++  E    G+L DR+           L     + A+ +
Sbjct: 76  HSLDHRNLIRLYGVVLTPPMKMV-TELAPLGSLLDRLRKHQGHFLLGTL----SRYAVQV 130

Query: 172 AHALAYL---HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG-----GTSGA 223
           A  + YL    F      ++RD    ++L    ++ K+ DF L  ++P+           
Sbjct: 131 AEGMGYLESKRF------IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHR 184

Query: 224 K 224
           K
Sbjct: 185 K 185

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 62.6 bits (152), Expect = 1e-11
 Identities = 33/107 (30%), Positives = 48/107 (44%), Gaps = 14/107 (13%)

Query: 112 AQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
            Q  H HI+KLIG   E P+ I+  E    G LR   L   +     L +   +  A  +
Sbjct: 446 RQFDHPHIVKLIGVITENPVWII-MELCTLGELRSF-LQVRKFS---LDLASLILYAYQL 500

Query: 172 AHALAYL---HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
           + ALAYL    F      V+RD    ++L +  +  K+ DF LS  +
Sbjct: 501 STALAYLESKRF------VHRDIAARNVLVSSNDCVKLGDFGLSRYM 541

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 61.4 bits (150), Expect = 1e-11
 Identities = 27/119 (22%), Positives = 52/119 (43%), Gaps = 18/119 (15%)

Query: 113 QMSHDHILKLIGCCL-ETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
           ++SH  ++K  G C  E PI I+  E +  G L + + S  +      L    L++  D+
Sbjct: 59  KLSHPKLVKFYGVCSKEYPIYIV-TEYISNGCLLNYLRSHGKGLEPSQL----LEMCYDV 113

Query: 172 AHALAYL---HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG---GTSGAK 224
              +A+L    F      ++RD    + L + +   K+ DF ++  + +     + G K
Sbjct: 114 CEGMAFLESHQF------IHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTK 166

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 61.5 bits (150), Expect = 2e-11
 Identities = 23/104 (22%), Positives = 47/104 (45%), Gaps = 15/104 (14%)

Query: 112 AQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
            Q+ + +I+++IG C      ++  E  E G L   +          +  K+ +++   +
Sbjct: 73  QQLDNPYIVRMIGICEAESWMLV-MEMAELGPLNKYLQQNRH-----VKDKNIIELVHQV 126

Query: 172 AHALAYL---HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
           +  + YL   +F      V+RD    ++L   ++ AK+ DF LS
Sbjct: 127 SMGMKYLEESNF------VHRDLAARNVLLVTQHYAKISDFGLS 164

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 62.0 bits (151), Expect = 2e-11
 Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 14/108 (12%)

Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRD--RILSASQPQTEPLLMKHRLKIAMD 170
           + +H +I++ IG  L++    +  E +  G+L+   R       Q   L M   L +A D
Sbjct: 130 KFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 189

Query: 171 IAHALAYL---HFGFPRPIVYRDFKTAHILFN---EENVAKMFDFSLS 212
           IA    YL   HF      ++RD    + L        VAK+ DF ++
Sbjct: 190 IACGCQYLEENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMA 231

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 62.0 bits (151), Expect = 2e-11
 Identities = 28/112 (25%), Positives = 45/112 (40%), Gaps = 20/112 (17%)

Query: 115 SHDHILKLIGCCLETPIPILAFESVEYGNLRD-----------RILSASQPQTEPLLMKH 163
            H +I+ L+G C +     +  E    GNLR+              + S    E L  K 
Sbjct: 133 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 192

Query: 164 RLKIAMDIAHALAYL---HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
            +  A  +A  + YL           ++RD    ++L  E+NV K+ DF L+
Sbjct: 193 LVSCAYQVARGMEYLASKKC------IHRDLAARNVLVTEDNVMKIADFGLA 238

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 61.5 bits (150), Expect = 2e-11
 Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 22/116 (18%)

Query: 112 AQMSHDHILKLIGCCLET-PIPILAFESVEYGNLRD-----------RILSASQPQTEPL 159
             + H+HI+K  G C +  P+ ++ FE +++G+L              +    +     L
Sbjct: 72  TNLQHEHIVKFYGVCGDGDPLIMV-FEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGEL 130

Query: 160 LMKHRLKIAMDIAHALAYL---HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
            +   L IA  IA  + YL   HF      V+RD  T + L     + K+ DF +S
Sbjct: 131 GLSQMLHIASQIASGMVYLASQHF------VHRDLATRNCLVGANLLVKIGDFGMS 180

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 61.4 bits (150), Expect = 2e-11
 Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 17/118 (14%)

Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
            + H HI+KLIG   E P  I+  E   YG L    L  ++     L +   +  ++ I 
Sbjct: 69  NLDHPHIVKLIGIIEEEPTWII-MELYPYGELGHY-LERNKNS---LKVLTLVLYSLQIC 123

Query: 173 HALAYL---HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGG---TSGAK 224
            A+AYL   +       V+RD    +IL       K+ DF LS  I +      S  +
Sbjct: 124 KAMAYLESINC------VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTR 175

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 61.5 bits (150), Expect = 2e-11
 Identities = 29/114 (25%), Positives = 47/114 (41%), Gaps = 19/114 (16%)

Query: 112 AQMSHDHILKLIGCCLETPIPILAFESVEYGNLRD----------RILSASQPQTEPLLM 161
             + H HI++  G C E    ++ FE + +G+L             +         PL +
Sbjct: 98  TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 157

Query: 162 KHRLKIAMDIAHALAYL---HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
              L +A  +A  + YL   HF      V+RD  T + L  +  V K+ DF +S
Sbjct: 158 GQLLAVASQVAAGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMS 205

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 61.1 bits (149), Expect = 2e-11
 Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 17/119 (14%)

Query: 113 QMSHDHILKLIGCCL-ETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
           ++ H ++++L+G C  E P  I+  E + YGNL D  L     Q   +     L +A  I
Sbjct: 65  EIKHPNLVQLLGVCTREPPFYII-TEFMTYGNLLD-YLRECNRQE--VSAVVLLYMATQI 120

Query: 172 AHALAYL---HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG---GTSGAK 224
           + A+ YL   +F      ++RD    + L  E ++ K+ DF LS  +        +GAK
Sbjct: 121 SSAMEYLEKKNF------IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAK 173

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 61.5 bits (150), Expect = 2e-11
 Identities = 23/110 (20%), Positives = 44/110 (40%), Gaps = 18/110 (16%)

Query: 115 SHDHILKLIGCCLETPIPILAFESVEYGNLRD---------RILSASQPQTEPLLMKHRL 165
            H++I+ L+G C      ++  E   YG+L +             A          +  L
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLL 167

Query: 166 KIAMDIAHALAYL---HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
             +  +A  +A+L   +       ++RD    ++L    +VAK+ DF L+
Sbjct: 168 HFSSQVAQGMAFLASKNC------IHRDVAARNVLLTNGHVAKIGDFGLA 211

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 61.1 bits (149), Expect = 3e-11
 Identities = 27/122 (22%), Positives = 52/122 (42%), Gaps = 20/122 (16%)

Query: 113 QMSHDHILKLIGCCLETPIPILA-FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
             SH ++L L+G CL +    L     +++G+LR+  +           +K  +   + +
Sbjct: 82  DFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN-FIRNETHN---PTVKDLIGFGLQV 137

Query: 172 AHALAYL---HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE------GGTSG 222
           A  + YL    F      V+RD    + + +E+   K+ DF L+  + +         +G
Sbjct: 138 AKGMKYLASKKF------VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTG 191

Query: 223 AK 224
           AK
Sbjct: 192 AK 193

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 61.8 bits (150), Expect = 3e-11
 Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 7/106 (6%)

Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
           ++ H+ +++L     E PI I+  E +  G+L D +        + L +   + +A  IA
Sbjct: 318 KLRHEKLVQLYAVVSEEPIYIV-TEYMSKGSLLDFLKG---ETGKYLRLPQLVDMAAQIA 373

Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG 218
             +AY+        V+RD + A+IL  E  V K+ DF L+  I + 
Sbjct: 374 SGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN 416

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 61.2 bits (149), Expect = 3e-11
 Identities = 27/110 (24%), Positives = 42/110 (38%), Gaps = 11/110 (10%)

Query: 112 AQMSHDHILKLIGCCLET---PIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIA 168
             +  D I+K  G         + ++  E +  G LRD  L   + +   L     L  +
Sbjct: 79  KALHSDFIVKYRGVSYGPGRQSLRLV-MEYLPSGCLRDF-LQRHRAR---LDASRLLLYS 133

Query: 169 MDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG 218
             I   + YL     R  V+RD    +IL   E   K+ DF L+  +P  
Sbjct: 134 SQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD 180

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 61.3 bits (149), Expect = 3e-11
 Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 7/106 (6%)

Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
           ++ H+ +++L     E PI I+  E +  G+L D  L     +   L +   + +A  IA
Sbjct: 235 KLRHEKLVQLYAVVSEEPIYIV-TEYMSKGSLLDF-LKGETGKY--LRLPQLVDMAAQIA 290

Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG 218
             +AY+        V+RD + A+IL  E  V K+ DF L+  I + 
Sbjct: 291 SGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN 333

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 60.8 bits (148), Expect = 4e-11
 Identities = 32/111 (28%), Positives = 45/111 (40%), Gaps = 20/111 (18%)

Query: 116 HDHILKLIGCCLETPIPILAFESVEYGNLRD-----------RILSASQPQTEPLLMKHR 164
           H +I+ L+G C       LA E   +GNL D              + +      L  +  
Sbjct: 85  HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144

Query: 165 LKIAMDIAHALAYL---HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
           L  A D+A  + YL    F      ++RD    +IL  E  VAK+ DF LS
Sbjct: 145 LHFAADVARGMDYLSQKQF------IHRDLAARNILVGENYVAKIADFGLS 189

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 61.2 bits (149), Expect = 4e-11
 Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 7/101 (6%)

Query: 113 QMSHDHILKLIGCCLETPIPI-LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
           Q+ H ++++L+G  +E    + +  E +  G+L D  L +       L     LK ++D+
Sbjct: 242 QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVD-YLRSRGRSV--LGGDCLLKFSLDV 298

Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
             A+ YL        V+RD    ++L +E+NVAK+ DF L+
Sbjct: 299 CEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLT 336

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 60.9 bits (148), Expect = 5e-11
 Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 8/101 (7%)

Query: 113 QMSHDHILKLIGCCLET-PIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
           ++ H ++++L+G C    P  I+  E + YGNL D  L     Q   +     L +A  I
Sbjct: 272 EIKHPNLVQLLGVCTREPPFYII-TEFMTYGNLLD-YLRECNRQ--EVSAVVLLYMATQI 327

Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
           + A+ YL     +  ++R+    + L  E ++ K+ DF LS
Sbjct: 328 SSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLS 365

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 60.3 bits (147), Expect = 6e-11
 Identities = 32/122 (26%), Positives = 46/122 (37%), Gaps = 28/122 (22%)

Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRD-------------------RILSASQ 153
           Q++H H++KL G C +    +L  E  +YG+LR                       S   
Sbjct: 82  QVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH 141

Query: 154 PQTEPLLMKHRLKIAMDIAHALAYL---HFGFPRPIVYRDFKTAHILFNEENVAKMFDFS 210
           P    L M   +  A  I+  + YL           V+RD    +IL  E    K+ DF 
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYLAEMKL------VHRDLAARNILVAEGRKMKISDFG 195

Query: 211 LS 212
           LS
Sbjct: 196 LS 197

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 60.0 bits (146), Expect = 6e-11
 Identities = 22/104 (21%), Positives = 45/104 (43%), Gaps = 14/104 (13%)

Query: 112 AQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
            Q+ + +I++LIG C    + ++  E    G L   ++   +      +     ++   +
Sbjct: 65  HQLDNPYIVRLIGVCQAEALMLV-MEMAGGGPLHKFLVGKREEIPVSNV----AELLHQV 119

Query: 172 AHALAYL---HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
           +  + YL   +F      V+RD    ++L    + AK+ DF LS
Sbjct: 120 SMGMKYLEEKNF------VHRDLAARNVLLVNRHYAKISDFGLS 157

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 60.0 bits (146), Expect = 7e-11
 Identities = 22/111 (19%), Positives = 45/111 (40%), Gaps = 16/111 (14%)

Query: 115 SHDHILKLIGCCLETPIPILAFESVEYGNLRD-------------RILSASQPQTEPLLM 161
           +H +I+ L+G C      ++  E   YG+L +                +  +     L +
Sbjct: 85  NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 144

Query: 162 KHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
           +  L  +  +A  +A+L     +  ++RD    +IL     + K+ DF L+
Sbjct: 145 EDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLA 192

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 59.5 bits (145), Expect = 8e-11
 Identities = 21/116 (18%), Positives = 45/116 (38%), Gaps = 22/116 (18%)

Query: 112 AQMSHDHILKLIGCCL-ETPIPILAFESVEYGNLRD-----------RILSASQPQTEPL 159
           A++ H +++ L+G    + P+ ++ F    +G+L +                 +     L
Sbjct: 67  ARLQHPNVVCLLGVVTKDQPLSMI-FSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSAL 125

Query: 160 LMKHRLKIAMDIAHALAYL---HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
                + +   IA  + YL   H       V++D  T ++L  ++   K+ D  L 
Sbjct: 126 EPPDFVHLVAQIAAGMEYLSSHHV------VHKDLATRNVLVYDKLNVKISDLGLF 175

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 60.3 bits (146), Expect = 9e-11
 Identities = 21/104 (20%), Positives = 45/104 (43%), Gaps = 14/104 (13%)

Query: 112 AQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
            Q+ + +I++LIG C    + ++  E    G L   ++   +      +     ++   +
Sbjct: 391 HQLDNPYIVRLIGVCQAEALMLV-MEMAGGGPLHKFLVGKREEIPVSNV----AELLHQV 445

Query: 172 AHALAYL---HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
           +  + YL   +F      V+R+    ++L    + AK+ DF LS
Sbjct: 446 SMGMKYLEEKNF------VHRNLAARNVLLVNRHYAKISDFGLS 483

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 59.8 bits (145), Expect = 9e-11
 Identities = 23/104 (22%), Positives = 46/104 (44%), Gaps = 14/104 (13%)

Query: 113 QMSHDHILKLIGCCLETPIPIL-AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
             SH ++L L+G CL +    L     +++G+LR+  +           +K  +   + +
Sbjct: 146 DFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN-FIRNETHN---PTVKDLIGFGLQV 201

Query: 172 AHALAYL---HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
           A  + +L    F      V+RD    + + +E+   K+ DF L+
Sbjct: 202 AKGMKFLASKKF------VHRDLAARNCMLDEKFTVKVADFGLA 239

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 59.6 bits (145), Expect = 1e-10
 Identities = 36/123 (29%), Positives = 50/123 (40%), Gaps = 28/123 (22%)

Query: 112 AQMSHDHILKLIGCCLETPIPILAFESVEYGNLRD-------------------RILSAS 152
           A+  + +I+KL+G C       L FE + YG+L +                        S
Sbjct: 105 AEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVS 164

Query: 153 QPQTEPLLMKHRLKIAMDIAHALAYL---HFGFPRPIVYRDFKTAHILFNEENVAKMFDF 209
            P   PL    +L IA  +A  +AYL    F      V+RD  T + L  E  V K+ DF
Sbjct: 165 SPGPPPLSCAEQLCIARQVAAGMAYLSERKF------VHRDLATRNCLVGENMVVKIADF 218

Query: 210 SLS 212
            LS
Sbjct: 219 GLS 221

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 59.1 bits (144), Expect = 1e-10
 Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 17/106 (16%)

Query: 113 QMSHDHILKLIGCCLETPIPI-LAFESVEYGNLRD--RILSASQPQTEPLLMKHRLKIAM 169
           Q+ H ++++L+G  +E    + +  E +  G+L D  R           L     LK ++
Sbjct: 70  QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR-----SRGRSVLGGDCLLKFSL 124

Query: 170 DIAHALAYL---HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
           D+  A+ YL   +F      V+RD    ++L +E+NVAK+ DF L+
Sbjct: 125 DVCEAMEYLEGNNF------VHRDLAARNVLVSEDNVAKVSDFGLT 164

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 59.2 bits (144), Expect = 1e-10
 Identities = 22/105 (20%), Positives = 41/105 (39%), Gaps = 15/105 (14%)

Query: 112 AQMSHDHILKLIGCCL-ETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMD 170
            Q  H +I++L G         I+  E +E G+L   +    +       +   + +   
Sbjct: 105 GQFDHPNIIRLEGVVTRGRLAMIV-TEYMENGSLDTFL----RTHDGQFTIMQLVGMLRG 159

Query: 171 IAHALAYL---HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
           +   + YL    +      V+RD    ++L +   V K+ DF LS
Sbjct: 160 VGAGMRYLSDLGY------VHRDLAARNVLVDSNLVCKVSDFGLS 198

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 58.1 bits (141), Expect = 4e-10
 Identities = 28/105 (26%), Positives = 45/105 (42%), Gaps = 15/105 (14%)

Query: 112 AQMSHDHILKLIGCCLET-PIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMD 170
            Q  H +I++L G   ++ P+ I+  E +E G+L    L     Q     +   + +   
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIV-TEYMENGSLDS-FLRKHDAQ---FTVIQLVGMLRG 155

Query: 171 IAHALAYL---HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
           IA  + YL    +      V+RD    +IL N   V K+ DF L 
Sbjct: 156 IASGMKYLSDMGY------VHRDLAARNILINSNLVCKVSDFGLG 194

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 57.0 bits (138), Expect = 7e-10
 Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 15/105 (14%)

Query: 112 AQMSHDHILKLIGCCLET-PIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMD 170
            Q SH +I++L G   +  P+ I+  E +E G L    L     +     +   + +   
Sbjct: 101 GQFSHHNIIRLEGVISKYKPMMII-TEYMENGALDK-FLREKDGE---FSVLQLVGMLRG 155

Query: 171 IAHALAYL---HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
           IA  + YL   ++      V+RD    +IL N   V K+ DF LS
Sbjct: 156 IAAGMKYLANMNY------VHRDLAARNILVNSNLVCKVSDFGLS 194

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 56.5 bits (137), Expect = 1e-09
 Identities = 27/116 (23%), Positives = 46/116 (39%), Gaps = 21/116 (18%)

Query: 115 SHDHILKLIGCCLETPIPILAFESVEYGNLRD------------------RILSASQPQT 156
           SH++I+ L+G C  +    L FE   YG+L +                  +     +   
Sbjct: 107 SHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDL 166

Query: 157 EPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
             L  +  L  A  +A  + +L F   +  V+RD    ++L     V K+ DF L+
Sbjct: 167 NVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLA 219

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 55.6 bits (134), Expect = 3e-09
 Identities = 23/104 (22%), Positives = 43/104 (41%), Gaps = 16/104 (15%)

Query: 111 AAQMSHDHILKLI-----GCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRL 165
            A++ H  I+++            P+  +  E V   +L+           + L +   +
Sbjct: 133 LAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSK-------GQKLPVAEAI 185

Query: 166 KIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDF 209
              ++I  AL+YLH      +VY D K  +I+  EE + K+ D 
Sbjct: 186 AYLLEILPALSYLH---SIGLVYNDLKPENIMLTEEQL-KLIDL 225

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 55.1 bits (133), Expect = 4e-09
 Identities = 27/137 (19%), Positives = 45/137 (32%), Gaps = 10/137 (7%)

Query: 104 CINNIVYAAQMSHDHILKLIGCCLETPIP----ILAFESVEYGNLRDRILSASQPQTEPL 159
                      +H +IL+L+  CL          L     + G L + I      +   L
Sbjct: 73  AQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKD-KGNFL 131

Query: 160 LMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS--ISIPE 217
                L + + I   L  +H    +   +RD K  +IL  +E    + D        I  
Sbjct: 132 TEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHV 188

Query: 218 GGTSGAKCLKSERTEIC 234
            G+  A  L+    + C
Sbjct: 189 EGSRQALTLQDWAAQRC 205

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 53.8 bits (130), Expect = 9e-09
 Identities = 23/114 (20%), Positives = 49/114 (42%), Gaps = 21/114 (18%)

Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
           ++SH H++   G C+     IL  E V++G+L    L  ++     + +  +L++A  +A
Sbjct: 68  KLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDT-YLKKNKNC---INILWKLEVAKQLA 123

Query: 173 HALAYL---HFGFPRPIVYRDFKTAHIL--------FNEENVAKMFDFSLSISI 215
            A+ +L           ++ +    +IL               K+ D  +SI++
Sbjct: 124 AAMHFLEENTL------IHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITV 171

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 52.7 bits (127), Expect = 2e-08
 Identities = 23/122 (18%), Positives = 39/122 (31%), Gaps = 26/122 (21%)

Query: 108 IVYAAQMSHDHILKLIGCCLETPIPILAFES-------VEY--GNLRDRILSASQPQTEP 158
             +     H   ++L            A+E         E    +L+    +      E 
Sbjct: 108 GSHEKVGQHPCCVRLEQ----------AWEEGGILYLQTELCGPSLQQHCEAWGASLPEA 157

Query: 159 LLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG 218
            +         D   ALA+LH    + +V+ D K A+I        K+ DF L + +   
Sbjct: 158 QV----WGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA 210

Query: 219 GT 220
           G 
Sbjct: 211 GA 212

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 51.9 bits (124), Expect = 5e-08
 Identities = 22/127 (17%), Positives = 39/127 (30%), Gaps = 17/127 (13%)

Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
                  +K     L     +L  E   YG L + I        + +     +  AM + 
Sbjct: 123 PSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRML 182

Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVA-----------KMFDFSLSI---SIPEG 218
           + +  +H      I++ D K  + +     +             + D   SI     P+G
Sbjct: 183 YMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKG 239

Query: 219 GTSGAKC 225
               AKC
Sbjct: 240 TIFTAKC 246

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 51.2 bits (123), Expect = 7e-08
 Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 20/114 (17%)

Query: 112 AQMSHDHILKLIGCCLETPIPILAFESV----------EY---GNLRDRILSASQPQTEP 158
           A ++H ++++     LE    +    +V          EY   G L D I S +  Q   
Sbjct: 57  ASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQR- 115

Query: 159 LLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
                  ++   I  AL+Y+H    + I++RD K  +I  +E    K+ DF L+
Sbjct: 116 ---DEYWRLFRQILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLA 163

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 50.7 bits (122), Expect = 9e-08
 Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 8/99 (8%)

Query: 111 AAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMD 170
           ++Q+SH +I+ +I    E     L  E +E   L + I         PL +   +     
Sbjct: 65  SSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIE-----SHGPLSVDTAINFTNQ 119

Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDF 209
           I   + + H      IV+RD K  +IL +     K+FDF
Sbjct: 120 ILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDF 155

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 49.3 bits (118), Expect = 3e-07
 Identities = 29/143 (20%), Positives = 49/143 (34%), Gaps = 15/143 (10%)

Query: 79  YKGFWQERLISV----MRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIP-- 132
           YKG   E  + V    ++ R+  +               + H +I++       T     
Sbjct: 43  YKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKK 102

Query: 133 --ILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRD 190
             +L  E +  G L+   L   +     +L          I   L +LH   P PI++RD
Sbjct: 103 CIVLVTELMTSGTLKT-YLKRFKVMKIKVLRS----WCRQILKGLQFLHTRTP-PIIHRD 156

Query: 191 FKTAHILFNEEN-VAKMFDFSLS 212
            K  +I         K+ D  L+
Sbjct: 157 LKCDNIFITGPTGSVKIGDLGLA 179

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 49.3 bits (117), Expect = 3e-07
 Identities = 14/77 (18%), Positives = 30/77 (38%), Gaps = 7/77 (9%)

Query: 139 VEYGNLRDRI--LSASQPQTEPLLMKHRLKIAMDIAHALAYLH-FGFPRPIVYRDFKTAH 195
               NL+     L +     + L+   RL++ + +   LA LH +G    +V+   +   
Sbjct: 186 RMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG----LVHTYLRPVD 241

Query: 196 ILFNEENVAKMFDFSLS 212
           I+ ++     +  F   
Sbjct: 242 IVLDQRGGVFLTGFEHL 258

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 48.8 bits (117), Expect = 4e-07
 Identities = 21/105 (20%), Positives = 45/105 (42%), Gaps = 5/105 (4%)

Query: 112 AQMSHDHILKLIGCCLETPIPIL--AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAM 169
            ++ H +I++     ++     L    E  E G+L   I   ++ +   L  +  L++  
Sbjct: 60  RELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQ-YLDEEFVLRVMT 118

Query: 170 DIAHALAYLH--FGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
            +  AL   H        +++RD K A++  + +   K+ DF L+
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 48.5 bits (116), Expect = 5e-07
 Identities = 24/102 (23%), Positives = 45/102 (44%), Gaps = 8/102 (7%)

Query: 112 AQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSA-SQPQTEPLLMKHRLKIAMD 170
           A M H +I++      E     +  +  E G+L  RI +       E  +    L   + 
Sbjct: 78  ANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQI----LDWFVQ 133

Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
           I  AL ++H    R I++RD K+ +I   ++   ++ DF ++
Sbjct: 134 ICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIA 172

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 48.6 bits (116), Expect = 5e-07
 Identities = 18/109 (16%), Positives = 47/109 (43%), Gaps = 7/109 (6%)

Query: 114 MSHDHILKLIGCCLETPIPI-LAFESVEYGNLRDRILSA---SQPQTEPLLMKHRLKIAM 169
           + +++ L   G  +     + + +E +E  ++           +  T  + ++    I  
Sbjct: 100 IKNEYCLTCEGI-ITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIK 158

Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG 218
            + ++ +Y+H    + I +RD K ++IL ++    K+ DF  S  + + 
Sbjct: 159 SVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDK 205

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 48.1 bits (114), Expect = 8e-07
 Identities = 13/76 (17%), Positives = 28/76 (36%), Gaps = 5/76 (6%)

Query: 139 VEYGNLRDRI--LSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHI 196
               NL+     L +     + L+   RL++ + +   LA LH      +V+   +   I
Sbjct: 181 RMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGLVHTYLRPVDI 237

Query: 197 LFNEENVAKMFDFSLS 212
           + ++     +  F   
Sbjct: 238 VLDQRGGVFLTGFEHL 253

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 47.0 bits (112), Expect = 2e-06
 Identities = 27/113 (23%), Positives = 47/113 (41%), Gaps = 17/113 (15%)

Query: 112 AQMSHDHILKLIGCCLETPIPILAFESV---------EY---GNLRDRILSASQPQTEPL 159
           A++ H  I++     LE         S          +     NL+D +    +   E  
Sbjct: 58  AKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWM--NGRCTIEER 115

Query: 160 LMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
                L I + IA A+ +LH    + +++RD K ++I F  ++V K+ DF L 
Sbjct: 116 ERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLV 165

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 46.9 bits (112), Expect = 2e-06
 Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 12/115 (10%)

Query: 111 AAQMSHDHILKL--IGC--CLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLK 166
           AA ++H  I+ +   G       P+P +  E V+   LRD +         P+  K  ++
Sbjct: 66  AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH-----TEGPMTPKRAIE 120

Query: 167 IAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTS 221
           +  D   AL + H      I++RD K A+I+ +  N  K+ DF ++ +I + G S
Sbjct: 121 VIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 172

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 46.5 bits (111), Expect = 2e-06
 Identities = 22/118 (18%), Positives = 40/118 (33%), Gaps = 24/118 (20%)

Query: 112 AQMSHDHILKLIGCCLETPIPILAFESV-------------EY---GNLRDRILSA-SQP 154
           A++ H +I+   GC                           E+   G L   I     + 
Sbjct: 59  AKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK 118

Query: 155 QTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
             + L     L++   I   + Y+H    + ++ RD K ++I   +    K+ DF L 
Sbjct: 119 LDKVLA----LELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLV 169

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 46.1 bits (110), Expect = 3e-06
 Identities = 22/104 (21%), Positives = 44/104 (42%), Gaps = 10/104 (9%)

Query: 112 AQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQT---EPLLMKHRLKIA 168
            Q++H +++K     +E     +  E  + G+L   I    + +    E  +     K  
Sbjct: 87  KQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTV----WKYF 142

Query: 169 MDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
           + +  AL ++H    R +++RD K A++      V K+ D  L 
Sbjct: 143 VQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLG 183

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 45.8 bits (109), Expect = 4e-06
 Identities = 19/120 (15%), Positives = 38/120 (31%), Gaps = 10/120 (8%)

Query: 108 IVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQ---TEPLLMKHR 164
             +A    H H+++      E    ++  E    G+L D I    +      E  L    
Sbjct: 62  YAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKD-- 119

Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAK 224
             + + +   L Y+H      +V+ D K ++I  +  ++                    K
Sbjct: 120 --LLLQVGRGLRYIHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFK 174

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 45.3 bits (108), Expect = 6e-06
 Identities = 19/101 (18%), Positives = 36/101 (35%), Gaps = 12/101 (11%)

Query: 111 AAQMSHDHILKL--IGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIA 168
           A ++   H++ +   G         +    +   +L   +      +  PL     + I 
Sbjct: 88  AGRLQEPHVVPIHDFGE--IDGQLYVDMRLINGVDLAAMLR-----RQGPLAPPRAVAIV 140

Query: 169 MDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDF 209
             I  AL   H        +RD K  +IL + ++ A + DF
Sbjct: 141 RQIGSALDAAH---AAGATHRDVKPENILVSADDFAYLVDF 178

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 45.6 bits (108), Expect = 8e-06
 Identities = 20/112 (17%), Positives = 41/112 (36%), Gaps = 17/112 (15%)

Query: 113 QMSHDHILKLIGCCLETPIPI-LAFESVEYGNLRDRILSASQPQTEP---LLMKHRLKIA 168
            + H  ++ L     E    + + +E +  G L +++       +E      M+      
Sbjct: 210 VLRHPTLVNLHDAF-EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMR------ 262

Query: 169 MDIAHALAYLHFGFPRPIVYRDFKTAHILF--NEENVAKMFDFSLSISIPEG 218
             +   L ++H       V+ D K  +I+F     N  K+ DF L+  +   
Sbjct: 263 -QVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK 310

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 45.1 bits (106), Expect = 1e-05
 Identities = 26/117 (22%), Positives = 51/117 (43%), Gaps = 18/117 (15%)

Query: 113 QMSHDHILKLIGCCLETP-------IPILAFESVEYGNLRDRILSASQPQTEPLLM-KHR 164
           +++H +++       +         +P+LA E  E G+LR  +   +Q +    L     
Sbjct: 68  KLNHPNVVSAR-EVPDGLQKLAPNDLPLLAMEYCEGGDLRKYL---NQFENCCGLKEGPI 123

Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILF---NEENVAKMFDFSLSISIPEG 218
             +  DI+ AL YLH      I++RD K  +I+     +  + K+ D   +  + +G
Sbjct: 124 RTLLSDISSALRYLHE---NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG 177

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 44.7 bits (105), Expect = 1e-05
 Identities = 8/75 (10%), Positives = 20/75 (26%), Gaps = 3/75 (4%)

Query: 147 RILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKM 206
             L           +     +   +    A L     + +V+  F   ++    +    +
Sbjct: 179 STLDFVYVFRGDEGILALHILTAQLIRLAANLQS---KGLVHGHFTPDNLFIMPDGRLML 235

Query: 207 FDFSLSISIPEGGTS 221
            D S    +   G +
Sbjct: 236 GDVSALWKVGTRGPA 250

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 44.5 bits (105), Expect = 1e-05
 Identities = 23/143 (16%), Positives = 48/143 (33%), Gaps = 5/143 (3%)

Query: 70  ITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLET 129
           +         +            +  S+     +    I      S  + +  +      
Sbjct: 74  LETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPK 133

Query: 130 PIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYR 189
               +  +     NL+D +      +         L I + IA A+ +LH    + +++R
Sbjct: 134 VYLYIQMQLCRKENLKDWMNRRCSLEDRE--HGVCLHIFIQIAEAVEFLHS---KGLMHR 188

Query: 190 DFKTAHILFNEENVAKMFDFSLS 212
           D K ++I F  ++V K+ DF L 
Sbjct: 189 DLKPSNIFFTMDDVVKVGDFGLV 211

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 44.0 bits (104), Expect = 2e-05
 Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 12/104 (11%)

Query: 114 MSHDHILKLIGCCLETPIPILAFESVEY--------GNLRDRILSASQPQTEPLLMKHRL 165
             H +I++                  E+        G L + +         PL     L
Sbjct: 83  SGHPNIVQFCSAA-SIGKEESDTGQAEFLLLTELCKGQLVEFLKKMES--RGPLSCDTVL 139

Query: 166 KIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDF 209
           KI      A+ ++H   P PI++RD K  ++L + +   K+ DF
Sbjct: 140 KIFYQTCRAVQHMHRQKP-PIIHRDLKVENLLLSNQGTIKLCDF 182

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 43.6 bits (103), Expect = 2e-05
 Identities = 25/113 (22%), Positives = 45/113 (39%), Gaps = 9/113 (7%)

Query: 112 AQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
           A +S   I+ L G   E P   +  E +E G+L   ++       E   +          
Sbjct: 105 AGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ-LIKQMGCLPEDRALY----YLGQA 159

Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILFNEE-NVAKMFDFSLSISIPEGGTSGA 223
              L YLH    R I++ D K  ++L + + + A + DF  ++ +   G   +
Sbjct: 160 LEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKS 209

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 43.4 bits (103), Expect = 3e-05
 Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 16/107 (14%)

Query: 116 HDHILKLIGCCLETPIPI-LAFESVEYGNLRDRILSASQPQTEP---LLMKHRLKIAMDI 171
           H +I++L     ET     L F+ ++ G L D +       +E     +M+        +
Sbjct: 83  HPNIIQLKDTY-ETNTFFFLVFDLMKKGELFDYLT-EKVTLSEKETRKIMRA-------L 133

Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG 218
              +  LH      IV+RD K  +IL +++   K+ DF  S  +  G
Sbjct: 134 LEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPG 177

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 43.5 bits (103), Expect = 3e-05
 Identities = 30/110 (27%), Positives = 41/110 (37%), Gaps = 13/110 (11%)

Query: 113 QMSHDHILKLIGCCLETPIPI-LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
            + H +I+KL     E      L  E  E G L ++I+       E         I   I
Sbjct: 102 SLDHPNIIKLFDVF-EDKKYFYLVTEFYEGGELFEQII-NRHKFDE----CDAANIMKQI 155

Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILF---NEENVAKMFDFSLSISIPEG 218
              + YLH      IV+RD K  +IL    N     K+ DF LS    + 
Sbjct: 156 LSGICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD 202

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 43.6 bits (103), Expect = 3e-05
 Identities = 23/112 (20%), Positives = 40/112 (35%), Gaps = 15/112 (13%)

Query: 116 HDHILKLIGCCLETPIPI-LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHA 174
           H ++++   C  +      +A E      L++ +                + +       
Sbjct: 77  HPNVIRYF-CTEKDRQFQYIAIELCA-ATLQEYVEQKDFAHLG----LEPITLLQQTTSG 130

Query: 175 LAYLHFGFPRPIVYRDFKTAHILFNEEN-----VAKMFDFSLSISIPEGGTS 221
           LA+LH      IV+RD K  +IL +  N      A + DF L   +  G  S
Sbjct: 131 LAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHS 179

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 42.9 bits (102), Expect = 3e-05
 Identities = 23/107 (21%), Positives = 41/107 (38%), Gaps = 9/107 (8%)

Query: 114 MSHDHILKLIGCCLETPIPI-LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
           + H  IL+L     E    + L  E    G +   + +  +P +E    + R      I 
Sbjct: 68  LKHPSILELYNY-FEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSEN---EAR-HFMHQII 122

Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGG 219
             + YLH      I++RD   +++L       K+ DF L+  +    
Sbjct: 123 TGMLYLHS---HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH 166

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 42.8 bits (101), Expect = 5e-05
 Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 16/107 (14%)

Query: 116 HDHILKLIGCCLETPIPI-LAFESVEYGNLRDRILSASQPQTEP---LLMKHRLKIAMDI 171
           H HI+ LI    E+   + L F+ +  G L D +       +E     +M+        +
Sbjct: 159 HPHIITLIDSY-ESSSFMFLVFDLMRKGELFDYLT-EKVALSEKETRSIMRS-------L 209

Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG 218
             A+++LH      IV+RD K  +IL ++    ++ DF  S  +  G
Sbjct: 210 LEAVSFLHA---NNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPG 253

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 42.1 bits (99), Expect = 8e-05
 Identities = 23/120 (19%), Positives = 48/120 (40%), Gaps = 13/120 (10%)

Query: 113 QMSHDHILKLIGC--CLETPIPILAFESVEYGNLRDRILSASQPQTEPLLM-KHRLKIAM 169
           +++H +I+KL        T   +L  E    G+L   +    +P     L     L +  
Sbjct: 63  KLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVL---EEPSNAYGLPESEFLIVLR 119

Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILF----NEENVAKMFDFSLSISIPEGGTSGAKC 225
           D+   + +L       IV+R+ K  +I+     + ++V K+ DF  +  + +     +  
Sbjct: 120 DVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLY 176

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 41.8 bits (98), Expect = 1e-04
 Identities = 21/143 (14%), Positives = 46/143 (32%), Gaps = 26/143 (18%)

Query: 88  ISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDR 147
           +  +     + +        +  +   +H +I+      +      +    + YG+ +D 
Sbjct: 57  VRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKD- 115

Query: 148 ILSASQPQTEPLLMKHRLKIAMD---IA-------HALAYLHFGFPRPIVYRDFKTAHIL 197
                       L+       M+   IA        AL Y+H       V+R  K +HIL
Sbjct: 116 ------------LICTHFMDGMNELAIAYILQGVLKALDYIHH---MGYVHRSVKASHIL 160

Query: 198 FNEENVAKMFDFSLSISIPEGGT 220
            + +    +     ++S+   G 
Sbjct: 161 ISVDGKVYLSGLRSNLSMISHGQ 183

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 41.7 bits (98), Expect = 1e-04
 Identities = 23/120 (19%), Positives = 48/120 (40%), Gaps = 13/120 (10%)

Query: 113 QMSHDHILKLIGC--CLETPIPILAFESVEYGNLRDRILSASQPQTEPLLM-KHRLKIAM 169
           +++H +I+KL        T   +L  E    G+L   +    +P     L     L +  
Sbjct: 63  KLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVL---EEPSNAYGLPESEFLIVLR 119

Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILF----NEENVAKMFDFSLSISIPEGGTSGAKC 225
           D+   + +L       IV+R+ K  +I+     + ++V K+ DF  +  + +     +  
Sbjct: 120 DVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLY 176

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 41.5 bits (98), Expect = 1e-04
 Identities = 27/113 (23%), Positives = 46/113 (40%), Gaps = 22/113 (19%)

Query: 114 MSHDHILKLIGCCLETPIPI-LAFESVEYGNLRDRILSASQPQTEPLLMKHRL------K 166
           ++H +I+KL    +ET   + L  E    G + D +++             R+       
Sbjct: 71  LNHPNIVKLFEV-IETEKTLYLIMEYASGGEVFDYLVA-----------HGRMKEKEARS 118

Query: 167 IAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGG 219
               I  A+ Y H    + IV+RD K  ++L + +   K+ DF  S     GG
Sbjct: 119 KFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG 168

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 41.4 bits (97), Expect = 1e-04
 Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 6/67 (8%)

Query: 146 DRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAK 205
           D++L  +    E +L K    +++ +   L YL       I++RD K ++IL N     K
Sbjct: 119 DQVLKKAGRIPEQILGK----VSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIK 172

Query: 206 MFDFSLS 212
           + DF +S
Sbjct: 173 LCDFGVS 179

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 27/129 (20%), Positives = 50/129 (38%), Gaps = 21/129 (16%)

Query: 116 HDHILKLIGCCLETPIPI-LAFESVEYGNLRDRILS--ASQPQTEPLLMKHRLKIAMDIA 172
           H ++++   C   T   + +A E     NL+D + S   S    +     + + +   IA
Sbjct: 68  HPNVIRYY-CSETTDRFLYIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 125

Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENV-------------AKMFDFSLSISIPEGG 219
             +A+LH      I++RD K  +IL +  +                + DF L   +  G 
Sbjct: 126 SGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 182

Query: 220 TSGAKCLKS 228
           +S    L +
Sbjct: 183 SSFRTNLNN 191

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 40.3 bits (95), Expect = 2e-04
 Identities = 24/105 (22%), Positives = 41/105 (39%), Gaps = 10/105 (9%)

Query: 113 QMSHDHILKLIGCCLETPIPI-LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
            + H +IL+L G        + L  E    G +    L       E            ++
Sbjct: 65  HLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRE-LQKLSKFDEQ----RTATYITEL 118

Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP 216
           A+AL+Y H    + +++RD K  ++L       K+ DF  S+  P
Sbjct: 119 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 160

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 40.4 bits (95), Expect = 3e-04
 Identities = 27/103 (26%), Positives = 40/103 (38%), Gaps = 10/103 (9%)

Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRD--RILSASQPQTEPLLMKHRLKIAMD 170
            + H +I++ +G   E     +  E V  G+L    R         E  +          
Sbjct: 75  HLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGF----YTKQ 130

Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEEN-VAKMFDFSLS 212
           I   L YLH      IV+RD K  ++L N  + V K+ DF  S
Sbjct: 131 ILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTS 170

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 40.0 bits (94), Expect = 3e-04
 Identities = 24/108 (22%), Positives = 43/108 (39%), Gaps = 10/108 (9%)

Query: 113 QMSHDHILKLIGCCLETPIPI-LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
            ++H H++   G   E    + +  E     +L +      +  TEP   + R      I
Sbjct: 97  SLAHQHVVGFHGF-FEDNDFVFVVLELCRRRSLLELH-KRRKALTEP---EAR-YYLRQI 150

Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGG 219
                YLH      +++RD K  ++  NE+   K+ DF L+  +   G
Sbjct: 151 VLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 195

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 40.2 bits (94), Expect = 3e-04
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%)

Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKC 225
           I   L  LH      IVYRD K  +IL ++    ++ D  L++ +PEG T   + 
Sbjct: 295 ICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV 346

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 40.0 bits (94), Expect = 4e-04
 Identities = 25/108 (23%), Positives = 44/108 (40%), Gaps = 13/108 (12%)

Query: 116 HDHILKLIGCCLETPIPI-LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHA 174
           H +I+KL        +   L  E +  G L +RI    +  +E         I   +  A
Sbjct: 65  HPNIVKLHEVF-HDQLHTFLVMELLNGGELFERIK-KKKHFSE----TEASYIMRKLVSA 118

Query: 175 LAYLHFGFPRPIVYRDFKTAHILF---NEENVAKMFDFSLSISIPEGG 219
           ++++H      +V+RD K  ++LF   N+    K+ DF  +   P   
Sbjct: 119 VSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN 163

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 40.0 bits (94), Expect = 4e-04
 Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 3/55 (5%)

Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKC 225
           +  AL YL     + I++RD K  +IL +E     + DF+++  +P         
Sbjct: 124 LVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMA 175

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 39.9 bits (94), Expect = 4e-04
 Identities = 24/108 (22%), Positives = 43/108 (39%), Gaps = 10/108 (9%)

Query: 113 QMSHDHILKLIGCCLETPIPI-LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
            ++H H++   G   E    + +  E     +L +      +  TEP   + R      I
Sbjct: 71  SLAHQHVVGFHGF-FEDNDFVFVVLELCRRRSLLELH-KRRKALTEP---EAR-YYLRQI 124

Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGG 219
                YLH      +++RD K  ++  NE+   K+ DF L+  +   G
Sbjct: 125 VLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 169

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 39.5 bits (93), Expect = 4e-04
 Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 6/67 (8%)

Query: 146 DRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAK 205
            +++   Q   E +L K    IA+ I  AL +LH      +++RD K +++L N     K
Sbjct: 97  KQVIDKGQTIPEDILGK----IAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVK 150

Query: 206 MFDFSLS 212
           M DF +S
Sbjct: 151 MCDFGIS 157

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 40.0 bits (94), Expect = 4e-04
 Identities = 27/114 (23%), Positives = 45/114 (39%), Gaps = 17/114 (14%)

Query: 114 MSHDHILKLIGCCLETPIPI-----LAFESVEYGNLRDRILS-ASQPQTEPLLMKHRLKI 167
               HI+ ++    E          +  E +E G L  RI     Q  TE    +   +I
Sbjct: 79  SGGPHIVCILDVY-ENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTE----REAAEI 133

Query: 168 AMDIAHALAYLHFGFPRPIVYRDFKTAHILF---NEENVAKMFDFSLSISIPEG 218
             DI  A+ +LH      I +RD K  ++L+    ++ V K+ DF  +    + 
Sbjct: 134 MRDIGTAIQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN 184

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 39.7 bits (93), Expect = 4e-04
 Identities = 30/108 (27%), Positives = 43/108 (39%), Gaps = 13/108 (12%)

Query: 105 INNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHR 164
           I  I    Q    H++K  G   +     +  E    G++ D I   ++  TE       
Sbjct: 72  IKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTED------ 125

Query: 165 LKIAM---DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDF 209
            +IA         L YLHF      ++RD K  +IL N E  AK+ DF
Sbjct: 126 -EIATILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKLADF 169

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 40.3 bits (94), Expect = 4e-04
 Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 3/52 (5%)

Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSG 222
           I   L ++H    R +VYRD K A+IL +E    ++ D  L+    +     
Sbjct: 301 IILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA 349

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 39.7 bits (93), Expect = 4e-04
 Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 8/75 (10%)

Query: 140 EY--GNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHIL 197
           E               P  E +L K    + + I  AL YL       +++RD K ++IL
Sbjct: 104 ELMGTCAEKLKKRMQGPIPERILGK----MTVAIVKALYYLKEK--HGVIHRDVKPSNIL 157

Query: 198 FNEENVAKMFDFSLS 212
            +E    K+ DF +S
Sbjct: 158 LDERGQIKLCDFGIS 172

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 39.5 bits (93), Expect = 5e-04
 Identities = 25/105 (23%), Positives = 40/105 (38%), Gaps = 10/105 (9%)

Query: 113 QMSHDHILKLIGCCLETPIPI-LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
            + H +IL++          I L  E    G L    L       E    +    +   +
Sbjct: 70  HLRHPNILRMYNY-FHDRKRIYLMLEFAPRGELYKE-LQKHGRFDEQ---RSATFMEE-L 123

Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP 216
           A AL Y H    R +++RD K  ++L   +   K+ DF  S+  P
Sbjct: 124 ADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAP 165

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 39.2 bits (92), Expect = 6e-04
 Identities = 31/118 (26%), Positives = 48/118 (40%), Gaps = 29/118 (24%)

Query: 116 HDHILKLIGCCLETPIPI-LAFESVEYGNLRDRILS--------ASQPQTEPLLMKHRLK 166
           H ++L+LI    E      L FE +  G++   I          AS       +++    
Sbjct: 70  HRNVLELIEFF-EEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV------VVQ---- 118

Query: 167 IAMDIAHALAYLHFGFPRPIVYRDFKTAHILF-NEENVA--KMFDFSLSISIPEGGTS 221
              D+A AL +LH    + I +RD K  +IL  +   V+  K+ DF L   I   G  
Sbjct: 119 ---DVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDC 170

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 39.2 bits (92), Expect = 6e-04
 Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 6/69 (8%)

Query: 144 LRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENV 203
            +           E +L K    I +    AL +L       I++RD K ++IL +    
Sbjct: 111 YKYVYSVLDDVIPEEILGK----ITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGN 164

Query: 204 AKMFDFSLS 212
            K+ DF +S
Sbjct: 165 IKLCDFGIS 173

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 38.8 bits (91), Expect = 9e-04
 Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 21/112 (18%)

Query: 105 INNIVYAAQMSHDHILKLIGCCL-ETPIPILAFESVEY---GNLRDRILSASQPQTEPLL 160
           I  I   A   H +I+KL+G    +  + I+    +E+   G +   +L   +  TEP  
Sbjct: 64  IVEIEILATCDHPYIVKLLGAYYHDGKLWIM----IEFCPGGAVDAIMLELDRGLTEP-- 117

Query: 161 MKHRLKIAM---DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDF 209
                +I +    +  AL +LH    + I++RD K  ++L   E   ++ DF
Sbjct: 118 -----QIQVVCRQMLEALNFLHS---KRIIHRDLKAGNVLMTLEGDIRLADF 161

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	241
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.98
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.98
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.98
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.98
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.98
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.98
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.98
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.97
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.97
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.97
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.97
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.97
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.97
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.97
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.97
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.97
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.97
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.97
3niz_A	311	Rhodanese family protein; structural genomics, str	99.97
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.97
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.97
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.97
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.97
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.97
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.97
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.97
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.97
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.97
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.97
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.97
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.97
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.97
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.97
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.97
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.97
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.97
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.97
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.97
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.97
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.97
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.97
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.97
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.97
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.97
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.97
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.97
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.97
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.97
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.97
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.97
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.97
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.97
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.97
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.97
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.97
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.97
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.97
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.97
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.97
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.97
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.97
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.97
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.97
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.97
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.97
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.97
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.97
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.97
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.97
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.97
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.97
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.97
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.97
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.97
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.97
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.97
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.97
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.97
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.97
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.97
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.97
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.97
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.97
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.97
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.97
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.97
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.97
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.97
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.97
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.97
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.97
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.97
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.97
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.97
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.97
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.97
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.97
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.97
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.97
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.97
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.97
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.97
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.97
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.97
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.97
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.97
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.97
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.97
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.97
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.97
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.97
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.97
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.97
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.97
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.97
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.97
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.97
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.97
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.97
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.97
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.96
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.96
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.96
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.96
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.96
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.96
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.96
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.96
3bhy_A	283	Death-associated protein kinase 3; death associate	99.96
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.96
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.96
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.96
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.96
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.96
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.96
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.96
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.96
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.96
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.96
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.96
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.96
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.96
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.96
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.96
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.96
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.96
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.96
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.96
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.96
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.96
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.96
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.96
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.96
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.96
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.96
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.96
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.96
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.96
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.96
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.96
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.96
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.96
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.96
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.96
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.96
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.96
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.96
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.96
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.96
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.96
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.96
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.96
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.96
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.96
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.96
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.96
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.96
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.96
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.96
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.96
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.96
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.96
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.96
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.96
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.96
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.96
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.96
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.96
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.96
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.96
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.96
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.96
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.96
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.96
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.96
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.96
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.96
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.96
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.96
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.96
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.95
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.95
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.95
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.95
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.95
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.95
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.95
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.95
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.95
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.95
3uqc_A	286	Probable conserved transmembrane protein; structur	99.95
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.95
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.95
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.95
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.95
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.95
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.95
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.95
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.95
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.95
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.94
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.94
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.92
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.92
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.88
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.79
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.6
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	99.41
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	99.37
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	99.01
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	98.88
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	98.82
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	98.81
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	98.77
3ats_A	357	Putative uncharacterized protein; hypothetical pro	98.66
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	98.64
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	98.42
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	98.41
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	98.14
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	98.06
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	97.89
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	97.88
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.87
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	97.76
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	97.73
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	97.53
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	97.46
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	97.26
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	97.17
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	97.0
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	96.52
3mes_A	424	Choline kinase; malaria, structural genomics, stru	96.17
4ano_A	219	ESSB; membrane protein, membrane secretion, ESS ty	91.04
4ann_A	215	ESSB; membrane protein, membrane secretion, ESS ty	90.09
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	88.08
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	87.57

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=4.4e-41  Score=285.46  Aligned_cols=165  Identities=18%  Similarity=0.236  Sum_probs=147.8

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeC
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESV  139 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  139 (241)
                      ..|...++||+|+||.||+|.+  +++.||||++........+.+.+|+.+++.++|||||++++++.+++..|+|||||
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~  153 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  153 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence            4588889999999999999999  89999999998766566778999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCC
Q 026214          140 EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGG  219 (241)
Q Consensus       140 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~  219 (241)
                      ++|+|.+++...      .+++..+..++.||+.||.|||   +.+||||||||+||||+.++.+||+|||+|+.+..+.
T Consensus       154 ~gg~L~~~l~~~------~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~  224 (346)
T 4fih_A          154 EGGALTDIVTHT------RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV  224 (346)
T ss_dssp             TTEEHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS
T ss_pred             CCCcHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEECCCCCEEEecCcCceecCCCC
Confidence            999999999543      4899999999999999999999   9999999999999999999999999999999887654


Q ss_pred             ccccceeecCCceeeeecC
Q 026214          220 TSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~e  238 (241)
                      ....   ...++..|+|||
T Consensus       225 ~~~~---~~~GTp~YmAPE  240 (346)
T 4fih_A          225 PRRK---SLVGTPYWMAPE  240 (346)
T ss_dssp             CCBC---CCCSCGGGCCHH
T ss_pred             Cccc---ccccCcCcCCHH
Confidence            4332   224667799998

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=4.6e-41  Score=285.75  Aligned_cols=168  Identities=18%  Similarity=0.146  Sum_probs=140.6

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC--cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEe
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR--DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFE  137 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  137 (241)
                      ++|...+.||+|+||.||+|.+  +++.||||.+.....  ...+.+.+|+.++++++|||||++++++.+++..|+|||
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE  103 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD  103 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence            5788899999999999999998  799999999976532  235679999999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCC
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE  217 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~  217 (241)
                      ||+||+|.+++...   ....+++..+..|+.||+.||.|||   +.+||||||||+||||+.++.+||+|||+|+.+..
T Consensus       104 y~~gg~L~~~i~~~---~~~~~~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~  177 (350)
T 4b9d_A          104 YCEGGDLFKRINAQ---KGVLFQEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS  177 (350)
T ss_dssp             CCTTCBHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHH---HTTCEETTCCGGGEEECTTCCEEECSTTEESCCCH
T ss_pred             CCCCCcHHHHHHHc---CCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCCEEEcccccceeecC
Confidence            99999999999765   3456899999999999999999999   99999999999999999999999999999998765


Q ss_pred             CCccccceeecCCceeeeecC
Q 026214          218 GGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ......   ...++..|+|||
T Consensus       178 ~~~~~~---~~~GT~~YmAPE  195 (350)
T 4b9d_A          178 TVELAR---ACIGTPYYLSPE  195 (350)
T ss_dssp             HHHHHH---HHHSCCTTCCHH
T ss_pred             Cccccc---ccCCCccccCHH
Confidence            432221   123567889998

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=2.7e-40  Score=287.12  Aligned_cols=165  Identities=18%  Similarity=0.236  Sum_probs=147.7

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeC
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESV  139 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  139 (241)
                      ..|...++||+|+||.||+|.+  +++.||||++........+.+.+|+.+|+.++|||||++++++.+.+..|+|||||
T Consensus       151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~  230 (423)
T 4fie_A          151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  230 (423)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence            5688889999999999999999  89999999998776666778999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCC
Q 026214          140 EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGG  219 (241)
Q Consensus       140 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~  219 (241)
                      +||+|.+++...      .+++..+..|+.||+.||.|||   +++||||||||+||||+.++.+||+|||+|+.+..+.
T Consensus       231 ~gG~L~~~i~~~------~l~e~~~~~~~~qil~aL~ylH---~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~  301 (423)
T 4fie_A          231 EGGALTDIVTHT------RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV  301 (423)
T ss_dssp             TTEEHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC
T ss_pred             CCCcHHHHHhcc------CCCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEecCccceECCCCC
Confidence            999999999543      4899999999999999999999   9999999999999999999999999999999887654


Q ss_pred             ccccceeecCCceeeeecC
Q 026214          220 TSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~e  238 (241)
                      ....+   ..++..|+|||
T Consensus       302 ~~~~~---~~GTp~YmAPE  317 (423)
T 4fie_A          302 PRRKS---LVGTPYWMAPE  317 (423)
T ss_dssp             CCBCC---CEECTTTCCHH
T ss_pred             ccccc---cccCcCcCCHH
Confidence            43322   22456789998

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=6.2e-41  Score=280.33  Aligned_cols=172  Identities=21%  Similarity=0.262  Sum_probs=143.8

Q ss_pred             cCCCcCCeeecccceEEEEEEE-------CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW-------QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPIL  134 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  134 (241)
                      ++|...+.||+|+||.||+|.+       ++..||||+++.......+.|.+|+.++++++|||||+++|+|.+++..++
T Consensus        13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l   92 (299)
T 4asz_A           13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM   92 (299)
T ss_dssp             GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence            4577788999999999999986       367899999987665556789999999999999999999999999999999


Q ss_pred             EEeeCCCCCHHHHHhhcC--------CCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEE
Q 026214          135 AFESVEYGNLRDRILSAS--------QPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKM  206 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~~--------~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki  206 (241)
                      |||||++|||.+++....        ......++|..++.|+.|++.||.|||   +.+||||||||+|||++.++.+||
T Consensus        93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDlKp~NILl~~~~~~Ki  169 (299)
T 4asz_A           93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKI  169 (299)
T ss_dssp             EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEE
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccCHhhEEECCCCcEEE
Confidence            999999999999997642        123457999999999999999999999   999999999999999999999999


Q ss_pred             ccccCceecCCCCcccc-ceeecCCceeeeecC
Q 026214          207 FDFSLSISIPEGGTSGA-KCLKSERTEICCVRE  238 (241)
Q Consensus       207 ~DfG~a~~~~~~~~~~~-~~~~~~~~~~~~~~e  238 (241)
                      +|||+|+.......... ....  ++..|+|||
T Consensus       170 ~DFGla~~~~~~~~~~~~~~~~--gt~~ymAPE  200 (299)
T 4asz_A          170 GDFGMSRDVYSTDYYRVGGHTM--LPIRWMPPE  200 (299)
T ss_dssp             CCCSCHHHHTGGGCEEETTTEE--ECGGGCCHH
T ss_pred             CCcccceecCCCCceeecCcee--cChhhcCHH
Confidence            99999997755433221 1122  344688998

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=3.7e-40  Score=279.10  Aligned_cols=173  Identities=20%  Similarity=0.232  Sum_probs=138.3

Q ss_pred             cCCCcCCeeecccceEEEEEEE-------CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW-------QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPIL  134 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  134 (241)
                      .+|...++||+|+||.||+|.+       ++..||||+++.......+.|.+|+.++++++|||||+++|+|.+++..++
T Consensus        41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l  120 (329)
T 4aoj_A           41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM  120 (329)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence            4466678999999999999986       468899999987665566789999999999999999999999999999999


Q ss_pred             EEeeCCCCCHHHHHhhcCC----------CCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcE
Q 026214          135 AFESVEYGNLRDRILSASQ----------PQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVA  204 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~~~----------~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~  204 (241)
                      |||||++|+|.+++.....          ....++++..++.|+.|++.||.|||   +.+||||||||+||||+.++.+
T Consensus       121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLKp~NILl~~~~~~  197 (329)
T 4aoj_A          121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHRDLATRNCLVGQGLVV  197 (329)
T ss_dssp             EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEE
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHhhEEECCCCcE
Confidence            9999999999999976421          12457999999999999999999999   9999999999999999999999


Q ss_pred             EEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          205 KMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       205 ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ||+|||+|+.+......... ....++..|+|||
T Consensus       198 Ki~DFGla~~~~~~~~~~~~-~~~~gt~~ymAPE  230 (329)
T 4aoj_A          198 KIGDFGMSRDIYSTDYYRVG-GRTMLPIRWMPPE  230 (329)
T ss_dssp             EECCCC-----------------CCCCGGGCCHH
T ss_pred             EEcccccceeccCCCcceec-CcccccccccChh
Confidence            99999999977554322211 1223455689998

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=4.4e-40  Score=275.56  Aligned_cols=168  Identities=15%  Similarity=0.150  Sum_probs=147.2

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeecc---CCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRES---NRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      ++|...+.||+|+||.||+|.+  +++.||||.+.+.   .....+.+.+|+.+++.++|||||++++++.+++..|+||
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm  111 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL  111 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            4689999999999999999999  8999999999753   2234577999999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||++||+|.+++...     +.+++..+..++.||+.||.|||   +++|+||||||+||||+.++.+||+|||+|+.+.
T Consensus       112 Ey~~gG~L~~~i~~~-----~~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~  183 (311)
T 4aw0_A          112 SYAKNGELLKYIRKI-----GSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS  183 (311)
T ss_dssp             CCCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             ecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEEcCCCCEEEEEcCCceecC
Confidence            999999999999765     45999999999999999999999   9999999999999999999999999999999886


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .+..... .....+|..|+|||
T Consensus       184 ~~~~~~~-~~~~~GTp~YmAPE  204 (311)
T 4aw0_A          184 PESKQAR-ANSFVGTAQYVSPE  204 (311)
T ss_dssp             TTTTCCC-BCCCCSCGGGCCHH
T ss_pred             CCCCccc-ccCcccCcccCCHH
Confidence            5433211 11224677899998

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=1.3e-39  Score=275.62  Aligned_cols=164  Identities=20%  Similarity=0.164  Sum_probs=138.1

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeC
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESV  139 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  139 (241)
                      +.|...++||+|+||.||+|.+  +++.||||+++....     ..+|+.+++.++|||||++++++.+++..|+|||||
T Consensus        58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~  132 (336)
T 4g3f_A           58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELL  132 (336)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence            4567778899999999999999  799999999976431     247999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCC-cEEEccccCceecCCC
Q 026214          140 EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEEN-VAKMFDFSLSISIPEG  218 (241)
Q Consensus       140 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~-~~ki~DfG~a~~~~~~  218 (241)
                      +||+|.+++...     +.+++..+..++.||+.||.|||   +.+||||||||+||||+.++ .+||+|||+|+.+..+
T Consensus       133 ~gg~L~~~l~~~-----~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~  204 (336)
T 4g3f_A          133 EGGSLGQLIKQM-----GCLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPD  204 (336)
T ss_dssp             TTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC---
T ss_pred             CCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCC
Confidence            999999999765     45999999999999999999999   99999999999999999887 6999999999998766


Q ss_pred             Cccccce--eecCCceeeeecC
Q 026214          219 GTSGAKC--LKSERTEICCVRE  238 (241)
Q Consensus       219 ~~~~~~~--~~~~~~~~~~~~e  238 (241)
                      +......  -.-.+|..|+|||
T Consensus       205 ~~~~~~~~~~~~~GT~~YmAPE  226 (336)
T 4g3f_A          205 GLGKSLLTGDYIPGTETHMAPE  226 (336)
T ss_dssp             ---------CCCCCCGGGCCHH
T ss_pred             CcccceecCCccccCccccCHH
Confidence            4332222  1223677899998

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=2.5e-39  Score=271.08  Aligned_cols=170  Identities=19%  Similarity=0.243  Sum_probs=138.1

Q ss_pred             HHhcCCCcCCeeecccceEEEEEEECCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           59 LATNNYDQKNVITEDWGCILYKGFWQERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        59 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      ...+++...++||+|+||+||+|.+.+ .||||.++...  ....+.|.+|+.++++++|||||+++|++.. +..++||
T Consensus        33 i~~~~l~l~~~iG~G~fG~Vy~~~~~~-~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVm  110 (307)
T 3omv_A           33 IEASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVT  110 (307)
T ss_dssp             CCTTSCCEEEECCCCSSSEEEEEESSS-EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred             EcHHHeEEeeEEeeCCCcEEEEEEECC-cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEE
Confidence            344667788999999999999999754 59999987543  2335679999999999999999999998864 5689999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      |||++|||.+++...    ...+++..+..|+.|++.||.|||   +.+||||||||+||||++++.+||+|||+|+...
T Consensus       111 Ey~~gGsL~~~l~~~----~~~l~~~~~~~i~~qia~gL~yLH---~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~  183 (307)
T 3omv_A          111 QWCEGSSLYKHLHVQ----ETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKS  183 (307)
T ss_dssp             ECCSSCBHHHHHHTS----CCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCSSSEEEETTEEEEECCCSSCBC--
T ss_pred             EcCCCCCHHHHHhhc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCccCHHHEEECCCCcEEEeeccCceecc
Confidence            999999999999765    356999999999999999999999   9999999999999999999999999999999775


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ...... ......++..|+|||
T Consensus       184 ~~~~~~-~~~~~~GT~~ymAPE  204 (307)
T 3omv_A          184 RWSGSQ-QVEQPTGSVLWMAPE  204 (307)
T ss_dssp             -----------CCCCTTSCCHH
T ss_pred             cCCcce-eecccccCCCccCHH
Confidence            433221 112234566789998

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=1.6e-39  Score=272.85  Aligned_cols=171  Identities=16%  Similarity=0.195  Sum_probs=140.9

Q ss_pred             CCcCCeeecccceEEEEEEE-------CCeEEEEEEeeccCC-cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEE
Q 026214           64 YDQKNVITEDWGCILYKGFW-------QERLISVMRFRESNR-DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA  135 (241)
Q Consensus        64 ~~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  135 (241)
                      +...++||+|+||.||+|.+       ++..||||++..... ...+.|.+|+.++++++|||||+++|+|.+++..++|
T Consensus        28 ~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV  107 (308)
T 4gt4_A           28 VRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMI  107 (308)
T ss_dssp             EEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred             CeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEE
Confidence            44578899999999999986       457899999976432 3457799999999999999999999999999999999


Q ss_pred             EeeCCCCCHHHHHhhcCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcE
Q 026214          136 FESVEYGNLRDRILSASQ-----------PQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVA  204 (241)
Q Consensus       136 ~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~  204 (241)
                      ||||++|||.+++.....           .....++|..++.|+.||+.||.|||   +.+||||||||+||||++++.+
T Consensus       108 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLK~~NILl~~~~~~  184 (308)
T 4gt4_A          108 FSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKLNV  184 (308)
T ss_dssp             EECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCE
T ss_pred             EEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCccccceEECCCCCE
Confidence            999999999999975421           11346899999999999999999999   9999999999999999999999


Q ss_pred             EEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          205 KMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       205 ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ||+|||+|+.+........ .....++..|+|||
T Consensus       185 Ki~DFGlar~~~~~~~~~~-~~~~~gt~~ymAPE  217 (308)
T 4gt4_A          185 KISDLGLFREVYAADYYKL-LGNSLLPIRWMAPE  217 (308)
T ss_dssp             EECCSCCBCGGGGGGCBCS-SSSSCBCGGGCCHH
T ss_pred             EECCcccceeccCCCceeE-ecccccCCcccCHH
Confidence            9999999997754332211 11223455689998

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=3.9e-39  Score=266.00  Aligned_cols=164  Identities=22%  Similarity=0.263  Sum_probs=132.3

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      ++|...+.||+|+||.||+|.+  +++.||+|.+....   ......+.+|+.+++.++|||||++++++.+++..|+||
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm   92 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI   92 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence            6799999999999999999998  89999999997643   223467899999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||+ +|+|.+++...     ..+++..+..++.|++.||.|||   +++|+||||||+|||++.++.+||+|||+|+...
T Consensus        93 Ey~-~g~L~~~l~~~-----~~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~  163 (275)
T 3hyh_A           93 EYA-GNELFDYIVQR-----DKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT  163 (275)
T ss_dssp             ECC-CEEHHHHHHHS-----CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTCCEEECCSSCC----
T ss_pred             eCC-CCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCChHHeEECCCCCEEEeecCCCeecC
Confidence            999 57999999664     45999999999999999999999   9999999999999999999999999999998776


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ......    ...+|..|+|||
T Consensus       164 ~~~~~~----~~~GT~~Y~APE  181 (275)
T 3hyh_A          164 DGNFLK----TSCGSPNYAAPE  181 (275)
T ss_dssp             ---------------CTTSCHH
T ss_pred             CCCccC----CeeECcccCChh
Confidence            544322    234677889998

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=6.6e-39  Score=266.65  Aligned_cols=161  Identities=16%  Similarity=0.157  Sum_probs=136.8

Q ss_pred             CcCCeeecccceEEEEEEE--CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEec----CCcceEEE
Q 026214           65 DQKNVITEDWGCILYKGFW--QERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLE----TPIPILAF  136 (241)
Q Consensus        65 ~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv~  136 (241)
                      ...++||+|+||.||+|.+  ++..||+|.+....  ....+.|.+|+.++++++|||||+++++|.+    .+..++||
T Consensus        29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm  108 (290)
T 3fpq_A           29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT  108 (290)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence            4567899999999999999  78999999997643  2234679999999999999999999999865    34589999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCC--eEEccCCCCCeeEc-CCCcEEEccccCce
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRP--IVYRDFKTAHILFN-EENVAKMFDFSLSI  213 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~--ivH~dlk~~Nill~-~~~~~ki~DfG~a~  213 (241)
                      |||++|+|.+++...     ..+++..+..|+.||+.||.|||   +.+  |+||||||+||||+ .++.+||+|||+|+
T Consensus       109 Ey~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~ylH---~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~  180 (290)
T 3fpq_A          109 ELMTSGTLKTYLKRF-----KVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT  180 (290)
T ss_dssp             ECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred             eCCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCCEEecccChhheeEECCCCCEEEEeCcCCE
Confidence            999999999999765     45899999999999999999999   777  99999999999997 47999999999998


Q ss_pred             ecCCCCccccceeecCCceeeeecC
Q 026214          214 SIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .......     ....+|..|+|||
T Consensus       181 ~~~~~~~-----~~~~GTp~YmAPE  200 (290)
T 3fpq_A          181 LKRASFA-----KAVIGTPEFMAPE  200 (290)
T ss_dssp             GCCTTSB-----EESCSSCCCCCGG
T ss_pred             eCCCCcc-----CCcccCccccCHH
Confidence            6443221     1234677899998

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=2.4e-39  Score=271.51  Aligned_cols=169  Identities=19%  Similarity=0.189  Sum_probs=135.5

Q ss_pred             CCCcCCeeecccceEEEEEEECCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCC----cceEEEee
Q 026214           63 NYDQKNVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETP----IPILAFES  138 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~lv~e~  138 (241)
                      .|...++||+|+||.||+|.++++.||||++..... ....+..|+..+..++|||||++++++.+++    ..+|||||
T Consensus         4 ~i~L~~~iG~G~fG~Vy~~~~~g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey   82 (303)
T 3hmm_A            4 TIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY   82 (303)
T ss_dssp             GEEEEEEEEECSSSEEEEEEETTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred             EEEEEEEEeeCCCeEEEEEEECCEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecC
Confidence            466778999999999999999999999999875431 1122334566667889999999999998654    47999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCC-----CCCCeEEccCCCCCeeEcCCCcEEEccccCce
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFG-----FPRPIVYRDFKTAHILFNEENVAKMFDFSLSI  213 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-----~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~  213 (241)
                      |++|||.+++...      .+++..+..++.|++.||.|||+.     ...+||||||||+||||+.++.+||+|||+|+
T Consensus        83 ~~~gsL~~~l~~~------~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~  156 (303)
T 3hmm_A           83 HEHGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV  156 (303)
T ss_dssp             CTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             CCCCcHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCc
Confidence            9999999999653      489999999999999999999932     12299999999999999999999999999999


Q ss_pred             ecCCCCcccc-ceeecCCceeeeecC
Q 026214          214 SIPEGGTSGA-KCLKSERTEICCVRE  238 (241)
Q Consensus       214 ~~~~~~~~~~-~~~~~~~~~~~~~~e  238 (241)
                      .......... ......+|..|+|||
T Consensus       157 ~~~~~~~~~~~~~~~~~GT~~ymAPE  182 (303)
T 3hmm_A          157 RHDSATDTIDIAPNHRVGTKRYMAPE  182 (303)
T ss_dssp             EEETTTTEESCC-----CCGGGCCHH
T ss_pred             cccCCCCceeeecccccccccccCHH
Confidence            8866544322 222334677899998

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=2.8e-39  Score=270.43  Aligned_cols=171  Identities=19%  Similarity=0.291  Sum_probs=133.6

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCc-chhhHHHHHHHHHhcCCCceeeEeeEEecCC---------
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRD-GHGSCINNIVYAAQMSHDHILKLIGCCLETP---------  130 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---------  130 (241)
                      +|...+.||+|+||.||+|.+  +++.||||++...... ..+.+.+|+.++++++|||||++++++.+.+         
T Consensus         6 dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~   85 (299)
T 4g31_A            6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSS   85 (299)
T ss_dssp             HEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC---------
T ss_pred             hCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccC
Confidence            488889999999999999998  7999999999765422 3467899999999999999999999987544         


Q ss_pred             ---cceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEc
Q 026214          131 ---IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMF  207 (241)
Q Consensus       131 ---~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~  207 (241)
                         ..|++||||++|+|.+++....  .....++..+..++.|++.||.|||   +++|+||||||+||||+.++.+||+
T Consensus        86 ~~~~l~ivmE~~~gg~L~~~l~~~~--~~~~~~~~~~~~i~~qi~~al~ylH---~~~IiHRDlKp~NILl~~~~~vKl~  160 (299)
T 4g31_A           86 PKVYLYIQMQLCRKENLKDWMNGRC--TIEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVG  160 (299)
T ss_dssp             -CEEEEEEEECCCSCCHHHHHHTCC--SGGGSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEEC
T ss_pred             CCcEEEEEEecCCCCcHHHHHHhcC--CCChhHHHHHHHHHHHHHHHHHHHH---HCcCccccCcHHHeEECCCCcEEEc
Confidence               3689999999999999997652  2334567778899999999999999   9999999999999999999999999


Q ss_pred             cccCceecCCCCccccc---------eeecCCceeeeecC
Q 026214          208 DFSLSISIPEGGTSGAK---------CLKSERTEICCVRE  238 (241)
Q Consensus       208 DfG~a~~~~~~~~~~~~---------~~~~~~~~~~~~~e  238 (241)
                      |||+|+.+..+....+.         .....+|..|+|||
T Consensus       161 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE  200 (299)
T 4g31_A          161 DFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPE  200 (299)
T ss_dssp             CCCCC--------------------------CCCTTSCHH
T ss_pred             cCccceecCCCccccccccccccccccCCcccCccccCHH
Confidence            99999988665432211         12234677899998

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=1.9e-39  Score=271.39  Aligned_cols=166  Identities=19%  Similarity=0.152  Sum_probs=136.5

Q ss_pred             cCCCcCCeeecccceEEEEEEE-----CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW-----QERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPIL  134 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  134 (241)
                      ++|...+.||+|+||.||+|.+     +++.||+|.+....  ......+.+|+.++++++|||||++++++.+++..|+
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i  103 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL  103 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence            4688999999999999999987     46789999987542  2234568899999999999999999999999999999


Q ss_pred             EEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCcee
Q 026214          135 AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSIS  214 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~  214 (241)
                      ||||++||+|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+|+.
T Consensus       104 vmEy~~gg~L~~~l~~~-----~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~  175 (304)
T 3ubd_A          104 ILDFLRGGDLFTRLSKE-----VMFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKE  175 (304)
T ss_dssp             EECCCTTCEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC
T ss_pred             EEEcCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHeEEcCCCCEEeccccccee
Confidence            99999999999999765     35999999999999999999999   99999999999999999999999999999997


Q ss_pred             cCCCCccccceeecCCceeeeecC
Q 026214          215 IPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .........   ...+|..|+|||
T Consensus       176 ~~~~~~~~~---~~~GT~~YmAPE  196 (304)
T 3ubd_A          176 SIDHEKKAY---SFCGTVEYMAPE  196 (304)
T ss_dssp             -----CCCC---SCCCCGGGCCHH
T ss_pred             ccCCCcccc---ccccCcccCCHH
Confidence            654433222   234677899998

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=7.5e-38  Score=267.16  Aligned_cols=183  Identities=18%  Similarity=0.273  Sum_probs=150.2

Q ss_pred             cCHHHHHHHhcCCCcCCeeecccceEEEEEEE-------CCeEEEEEEeeccCC-cchhhHHHHHHHHHhcCC-CceeeE
Q 026214           52 FSAQELKLATNNYDQKNVITEDWGCILYKGFW-------QERLISVMRFRESNR-DGHGSCINNIVYAAQMSH-DHILKL  122 (241)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h-~niv~l  122 (241)
                      ++.++|+...++|...+.||+|+||.||+|.+       .++.||||.+..... ...+.|.+|+.++.++.| ||||++
T Consensus        54 ~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l  133 (353)
T 4ase_A           54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL  133 (353)
T ss_dssp             CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             CCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence            56677888889999999999999999999987       236799999976543 234679999999999965 999999


Q ss_pred             eeEEecC-CcceEEEeeCCCCCHHHHHhhcCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEcc
Q 026214          123 IGCCLET-PIPILAFESVEYGNLRDRILSASQ-----------PQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRD  190 (241)
Q Consensus       123 ~~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~d  190 (241)
                      +|+|..+ +..++|||||++|+|.++|.....           .....+++..++.++.||+.||.|||   +.+|||||
T Consensus       134 ~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH---~~~iiHRD  210 (353)
T 4ase_A          134 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRD  210 (353)
T ss_dssp             EEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSC
T ss_pred             EEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh---hCCeecCc
Confidence            9999765 568999999999999999976421           12355899999999999999999999   99999999


Q ss_pred             CCCCCeeEcCCCcEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          191 FKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       191 lk~~Nill~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |||+|||++.++.+||+|||+|+.+..+...... ....++..|+|||
T Consensus       211 LK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~-~~~~gt~~ymAPE  257 (353)
T 4ase_A          211 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRK-GDARLPLKWMAPE  257 (353)
T ss_dssp             CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEE-TTEEECGGGCCHH
T ss_pred             cCccceeeCCCCCEEECcchhhhhcccCCCceee-ccccccccccCHH
Confidence            9999999999999999999999987655432211 1112345689998

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.6e-36  Score=262.84  Aligned_cols=168  Identities=15%  Similarity=0.229  Sum_probs=140.1

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC--cchhhHHHHHHHHHhcCCCceeeEeeEEec------CCc
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR--DGHGSCINNIVYAAQMSHDHILKLIGCCLE------TPI  131 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~~  131 (241)
                      +.|...+.||+|+||.||+|.+  +++.||||++.....  ...+.+++|+.+|+.++|||||++++++..      .+.
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~  133 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS  133 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence            5688889999999999999999  899999999975432  234678899999999999999999998754      357


Q ss_pred             ceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccC
Q 026214          132 PILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL  211 (241)
Q Consensus       132 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~  211 (241)
                      .|+|||||+ |+|.+++..     ...+++..+..++.||+.||.|||   +.+||||||||+|||++.++.+||+|||+
T Consensus       134 ~~ivmE~~~-g~L~~~i~~-----~~~l~~~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NIl~~~~~~~Ki~DFGl  204 (398)
T 4b99_A          134 VYVVLDLME-SDLHQIIHS-----SQPLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGM  204 (398)
T ss_dssp             EEEEEECCS-EEHHHHHTS-----SSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred             EEEEEeCCC-CCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHH---HCcCcCCCcCccccccCCCCCEEEeecce
Confidence            899999996 689999954     356999999999999999999999   99999999999999999999999999999


Q ss_pred             ceecCCCCcc-ccceeecCCceeeeecC
Q 026214          212 SISIPEGGTS-GAKCLKSERTEICCVRE  238 (241)
Q Consensus       212 a~~~~~~~~~-~~~~~~~~~~~~~~~~e  238 (241)
                      |+.+...... ........+|..|+|||
T Consensus       205 a~~~~~~~~~~~~~~~~~~GT~~Y~APE  232 (398)
T 4b99_A          205 ARGLCTSPAEHQYFMTEYVATRWYRAPE  232 (398)
T ss_dssp             CBCC-------CCCCCSSCCCCTTCCHH
T ss_pred             eeecccCccccccccccceeChHhcCHH
Confidence            9987544222 22223345677899998

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=8e-36  Score=255.67  Aligned_cols=146  Identities=17%  Similarity=0.221  Sum_probs=131.5

Q ss_pred             HhcCCCcCCeeecccceEEEEEEE-----CCeEEEEEEeeccCCcchhhHHHHHHHHHhc-CCCceeeEeeEEecCCcce
Q 026214           60 ATNNYDQKNVITEDWGCILYKGFW-----QERLISVMRFRESNRDGHGSCINNIVYAAQM-SHDHILKLIGCCLETPIPI  133 (241)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~  133 (241)
                      ..+.|...++||+|+||.||+|.+     ++..||+|.+....  ...++.+|+.++..+ +||||+++++++.+.+..+
T Consensus        19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~   96 (361)
T 4f9c_A           19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVV   96 (361)
T ss_dssp             GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEE
T ss_pred             ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEE
Confidence            457799999999999999999986     46789999987653  456788999999998 7999999999999999999


Q ss_pred             EEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCC-CcEEEccccCc
Q 026214          134 LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEE-NVAKMFDFSLS  212 (241)
Q Consensus       134 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~-~~~ki~DfG~a  212 (241)
                      +||||+++|+|.+++.        .+++..+..++.|++.||.|||   +.+|+||||||+|||++.+ +.+||+|||+|
T Consensus        97 lvmE~~~g~~L~~~~~--------~l~~~~~~~~~~qll~al~ylH---~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla  165 (361)
T 4f9c_A           97 IAMPYLEHESFLDILN--------SLSFQEVREYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGLA  165 (361)
T ss_dssp             EEEECCCCCCHHHHHT--------TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred             EEEeCCCcccHHHHHc--------CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCcCCHHHeEEeCCCCeEEECcCCCC
Confidence            9999999999999982        3889999999999999999999   9999999999999999876 79999999999


Q ss_pred             eecCCC
Q 026214          213 ISIPEG  218 (241)
Q Consensus       213 ~~~~~~  218 (241)
                      +.....
T Consensus       166 ~~~~~~  171 (361)
T 4f9c_A          166 QGTHDT  171 (361)
T ss_dssp             EECTTC
T ss_pred             cccCCc
Confidence            877544

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=1.4e-35  Score=268.14  Aligned_cols=166  Identities=13%  Similarity=0.191  Sum_probs=147.1

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeC
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESV  139 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  139 (241)
                      ++|...+.||+|+||.||+|.+  ++..||+|.+........+.+.+|+.+|+.++|||||++++++.+.+..+++||||
T Consensus       157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~  236 (573)
T 3uto_A          157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM  236 (573)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence            5788899999999999999999  89999999998765555677899999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCC--CcEEEccccCceecCC
Q 026214          140 EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEE--NVAKMFDFSLSISIPE  217 (241)
Q Consensus       140 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~--~~~ki~DfG~a~~~~~  217 (241)
                      +||+|.+++...    ...+++..+..++.||+.||.|||   +++|+||||||+|||++.+  +.+||+|||+|+.+.+
T Consensus       237 ~gg~L~~~i~~~----~~~l~e~~~~~~~~qi~~al~ylH---~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~  309 (573)
T 3uto_A          237 SGGELFEKVADE----HNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP  309 (573)
T ss_dssp             CCCBHHHHHTCT----TSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCT
T ss_pred             CCCcHHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhccccCCCCCCEEEeeccceeEccC
Confidence            999999999654    346999999999999999999999   9999999999999999754  8999999999999876


Q ss_pred             CCccccceeecCCceeeeecC
Q 026214          218 GGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .....+    ..++..|+|||
T Consensus       310 ~~~~~~----~~GT~~y~APE  326 (573)
T 3uto_A          310 KQSVKV----TTGTAEFAAPE  326 (573)
T ss_dssp             TSEEEE----ECSSGGGCCHH
T ss_pred             CCceee----eEECccccCHH
Confidence            654332    23566789998

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=2.1e-35  Score=267.91  Aligned_cols=164  Identities=16%  Similarity=0.191  Sum_probs=140.9

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHH---HHHHHhcCCCceeeEeeEEecCCcce
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINN---IVYAAQMSHDHILKLIGCCLETPIPI  133 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E---~~~l~~l~h~niv~l~~~~~~~~~~~  133 (241)
                      ++|...+.||+|+||.||+|.+  ++..||+|++.+..   ......+.+|   +.+++.++|||||++++++.+.+..|
T Consensus       189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly  268 (689)
T 3v5w_A          189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS  268 (689)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred             HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence            6788899999999999999999  89999999997532   1222333444   56667779999999999999999999


Q ss_pred             EEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCce
Q 026214          134 LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSI  213 (241)
Q Consensus       134 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~  213 (241)
                      +||||++||+|.+++...     +.+++..+..|+.||+.||.|||   +.+||||||||+||||+.+|.+||+|||+|+
T Consensus       269 lVmEy~~GGdL~~~l~~~-----~~l~E~~a~~y~~qIl~aL~yLH---~~gIiHRDLKPeNILld~~G~vKL~DFGlA~  340 (689)
T 3v5w_A          269 FILDLMNGGDLHYHLSQH-----GVFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLAC  340 (689)
T ss_dssp             EEECCCCSCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             EEEecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHeEEeCCCCEEecccceee
Confidence            999999999999999765     45999999999999999999999   9999999999999999999999999999999


Q ss_pred             ecCCCCccccceeecCCceeeeecC
Q 026214          214 SIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .+.......     -.+|..|+|||
T Consensus       341 ~~~~~~~~t-----~~GTp~YmAPE  360 (689)
T 3v5w_A          341 DFSKKKPHA-----SVGTHGYMAPE  360 (689)
T ss_dssp             ECSSCCCCS-----CCSCGGGCCHH
T ss_pred             ecCCCCCCC-----ccCCcCccCHH
Confidence            886654322     24677899998

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=2.9e-33  Score=235.95  Aligned_cols=186  Identities=27%  Similarity=0.385  Sum_probs=158.9

Q ss_pred             CCccccCHHHHHHHhcCCCcCCeeecccceEEEEEEE-CCeEEEEEEeeccCC-cchhhHHHHHHHHHhcCCCceeeEee
Q 026214           47 NPYRIFSAQELKLATNNYDQKNVITEDWGCILYKGFW-QERLISVMRFRESNR-DGHGSCINNIVYAAQMSHDHILKLIG  124 (241)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~  124 (241)
                      ...+.|+..++....++|...+.||+|+||.||+|.+ ++..||+|++..... .....+.+|+.++..++||||+++++
T Consensus        15 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~   94 (326)
T 3uim_A           15 GQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRG   94 (326)
T ss_dssp             CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCE
T ss_pred             CccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEE
Confidence            3466799999999999999999999999999999998 789999999876532 23346899999999999999999999


Q ss_pred             EEecCCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCC---CeEEccCCCCCeeEcCC
Q 026214          125 CCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPR---PIVYRDFKTAHILFNEE  201 (241)
Q Consensus       125 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~---~ivH~dlk~~Nill~~~  201 (241)
                      ++...+..++||||+++++|.+++..... ...++++..+..++.|++.||.|||   +.   +|+|+||||+|||++.+
T Consensus        95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~ivH~Dlkp~Nil~~~~  170 (326)
T 3uim_A           95 FCMTPTERLLVYPYMANGSVASCLRERPE-SQPPLDWPKRQRIALGSARGLAYLH---DHCDPKIIHRDVKAANILLDEE  170 (326)
T ss_dssp             EECCSSCCEEEEECCTTCBHHHHHHCCST-TCCCCCHHHHHHHHHHHHHHHHHHH---HSSSSCEECCCCSGGGEEECTT
T ss_pred             EEecCCceEEEEEeccCCCHHHHHHhccc-cCCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCeEeCCCchhhEEECCC
Confidence            99999999999999999999999977532 3456999999999999999999999   77   99999999999999999


Q ss_pred             CcEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          202 NVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       202 ~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +.+||+|||++..+..........  ..++..|++||
T Consensus       171 ~~~kl~Dfg~~~~~~~~~~~~~~~--~~gt~~y~aPE  205 (326)
T 3uim_A          171 FEAVVGDFGLAKLMDYKDTHVTTA--VRGTIGHIAPE  205 (326)
T ss_dssp             CCEEECCCSSCEECCSSSSCEECC--CCSCGGGCCHH
T ss_pred             CCEEeccCccccccCccccccccc--ccCCcCccCHH
Confidence            999999999999886554333222  22556788887

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=8.3e-33  Score=230.89  Aligned_cols=166  Identities=16%  Similarity=0.231  Sum_probs=147.1

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      .+.|...+.||+|+||.||+|.+  ++..||+|.+........+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   98 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence            46799999999999999999998  8899999999876656677899999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      +++++|.+++...      .+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++..+..+
T Consensus        99 ~~~~~L~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  169 (297)
T 3fxz_A           99 LAGGSLTDVVTET------CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE  169 (297)
T ss_dssp             CTTCBHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCST
T ss_pred             CCCCCHHHHHhhc------CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCc
Confidence            9999999999653      4899999999999999999999   999999999999999999999999999999988765


Q ss_pred             CccccceeecCCceeeeecC
Q 026214          219 GTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .....   ...++..|++||
T Consensus       170 ~~~~~---~~~gt~~y~aPE  186 (297)
T 3fxz_A          170 QSKRS---TMVGTPYWMAPE  186 (297)
T ss_dssp             TCCBC---CCCSCGGGCCHH
T ss_pred             ccccC---CccCCcCccChh
Confidence            44322   223455688887

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=2.1e-33  Score=246.33  Aligned_cols=176  Identities=14%  Similarity=0.109  Sum_probs=150.8

Q ss_pred             HHHHHHHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEec
Q 026214           54 AQELKLATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCLE  128 (241)
Q Consensus        54 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~  128 (241)
                      +.++....++|...++||+|+||.||+|.+  ++..||+|++....   ......+.+|..++..++||||+++++++.+
T Consensus        66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~  145 (437)
T 4aw2_A           66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD  145 (437)
T ss_dssp             HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred             hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence            344555668899999999999999999999  68999999997532   2234558999999999999999999999999


Q ss_pred             CCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEcc
Q 026214          129 TPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFD  208 (241)
Q Consensus       129 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~D  208 (241)
                      .+..++||||+++|+|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|
T Consensus       146 ~~~~~lV~Ey~~gg~L~~~l~~~----~~~l~e~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILl~~~g~vkL~D  218 (437)
T 4aw2_A          146 DNNLYLVMDYYVGGDLLTLLSKF----EDRLPEEMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLAD  218 (437)
T ss_dssp             SSEEEEEECCCTTCBHHHHHHTT----TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECC
T ss_pred             CCEEEEEEecCCCCcHHHHHHHc----cCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeeEcCCCCEEEcc
Confidence            99999999999999999999764    345999999999999999999999   99999999999999999999999999


Q ss_pred             ccCceecCCCCccccceeecCCceeeeecC
Q 026214          209 FSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       209 fG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ||+|+.+..+.......  ..++..|+|||
T Consensus       219 FGla~~~~~~~~~~~~~--~~GT~~Y~APE  246 (437)
T 4aw2_A          219 FGSCLKLMEDGTVQSSV--AVGTPDYISPE  246 (437)
T ss_dssp             CTTCEECCTTSCEECCS--CCSCGGGCCHH
T ss_pred             hhhhhhcccCCCccccc--ccCCcCeeChH
Confidence            99999887665433322  23556788988

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=6.4e-33  Score=232.41  Aligned_cols=170  Identities=19%  Similarity=0.219  Sum_probs=144.7

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeC
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESV  139 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  139 (241)
                      ++|...+.||+|+||.||+|.+  ++..||+|.+........+.+.+|+.++..++||||+++++++.+++..++||||+
T Consensus        10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~   89 (310)
T 3s95_A           10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI   89 (310)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence            4577889999999999999999  78999999987665556678999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCC
Q 026214          140 EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGG  219 (241)
Q Consensus       140 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~  219 (241)
                      ++++|.+++...    ...+++..+..++.|++.||.|||   +.+|+|+||||+|||++.++.+||+|||++..+....
T Consensus        90 ~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  162 (310)
T 3s95_A           90 KGGTLRGIIKSM----DSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEK  162 (310)
T ss_dssp             TTCBHHHHHHHC----CTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEECTTSCEEECCCTTCEECC---
T ss_pred             CCCcHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCcCeEEECCCCCEEEeecccceeccccc
Confidence            999999999774    345899999999999999999999   9999999999999999999999999999999876543


Q ss_pred             ccccc-----------eeecCCceeeeecC
Q 026214          220 TSGAK-----------CLKSERTEICCVRE  238 (241)
Q Consensus       220 ~~~~~-----------~~~~~~~~~~~~~e  238 (241)
                      .....           .....++..|+|||
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  192 (310)
T 3s95_A          163 TQPEGLRSLKKPDRKKRYTVVGNPYWMAPE  192 (310)
T ss_dssp             -----------------CCCCSCGGGCCHH
T ss_pred             ccccccccccccccccccccCCCcceeCHH
Confidence            32211           11233556688887

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=1.8e-32  Score=231.24  Aligned_cols=176  Identities=19%  Similarity=0.208  Sum_probs=151.9

Q ss_pred             ccCHHHHHHHhcC----------CCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCc
Q 026214           51 IFSAQELKLATNN----------YDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDH  118 (241)
Q Consensus        51 ~~~~~~~~~~~~~----------~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n  118 (241)
                      .++.+++..++..          |...+.||+|+||.||+|.+  ++..||||.+........+.+.+|+.++..++|||
T Consensus        24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n  103 (321)
T 2c30_A           24 VVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFN  103 (321)
T ss_dssp             -CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTT
T ss_pred             cCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCC
Confidence            4777787777754          55667999999999999998  78999999998776666778999999999999999


Q ss_pred             eeeEeeEEecCCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeE
Q 026214          119 ILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILF  198 (241)
Q Consensus       119 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill  198 (241)
                      |+++++++...+..++||||+++++|.+++..      ..+++..+..++.|++.||.|||   +.+|+||||||+|||+
T Consensus       104 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~------~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll  174 (321)
T 2c30_A          104 VVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ------VRLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSILL  174 (321)
T ss_dssp             BCCEEEEEEETTEEEEEECCCCSCBHHHHHTT------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEE
T ss_pred             cceEEEEEEECCEEEEEEecCCCCCHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEE
Confidence            99999999999999999999999999999843      35899999999999999999999   9999999999999999


Q ss_pred             cCCCcEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          199 NEENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       199 ~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +.++.+||+|||++..+..+.....   ...++..|+|||
T Consensus       175 ~~~~~~kl~Dfg~~~~~~~~~~~~~---~~~gt~~y~aPE  211 (321)
T 2c30_A          175 TLDGRVKLSDFGFCAQISKDVPKRK---SLVGTPYWMAPE  211 (321)
T ss_dssp             CTTCCEEECCCTTCEECCSSSCCBC---CCCSCGGGCCHH
T ss_pred             CCCCcEEEeeeeeeeecccCccccc---cccCCccccCHh
Confidence            9999999999999998765533221   223455688887

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=6e-33  Score=235.09  Aligned_cols=167  Identities=19%  Similarity=0.199  Sum_probs=146.0

Q ss_pred             HhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEE
Q 026214           60 ATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA  135 (241)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  135 (241)
                      ..++|...+.||+|+||.||+|.+  ++..||+|++....  ....+.+.+|+.+++.++||||+++++++...+..++|
T Consensus        13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv   92 (328)
T 3fe3_A           13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLI   92 (328)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence            356799999999999999999998  89999999997643  23356788999999999999999999999999999999


Q ss_pred             EeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceec
Q 026214          136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI  215 (241)
Q Consensus       136 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~  215 (241)
                      |||+++++|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++..+
T Consensus        93 ~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~  164 (328)
T 3fe3_A           93 MEYASGGEVFDYLVAH-----GRMKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEF  164 (328)
T ss_dssp             ECCCTTCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTCCGGG
T ss_pred             EECCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCCHHHEEEcCCCCEEEeeccCceec
Confidence            9999999999999665     34899999999999999999999   999999999999999999999999999999877


Q ss_pred             CCCCccccceeecCCceeeeecC
Q 026214          216 PEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ..+.....    ..++..|+|||
T Consensus       165 ~~~~~~~~----~~gt~~y~aPE  183 (328)
T 3fe3_A          165 TVGGKLDA----FCGAPPYAAPE  183 (328)
T ss_dssp             SSSCGGGT----TSSSGGGCCHH
T ss_pred             CCCCcccc----ccCCcceeCcc
Confidence            65543322    23556788887

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=100.00  E-value=4.1e-32  Score=226.95  Aligned_cols=185  Identities=26%  Similarity=0.349  Sum_probs=157.6

Q ss_pred             CccccCHHHHHHHhcCCCcC------CeeecccceEEEEEEECCeEEEEEEeeccC----CcchhhHHHHHHHHHhcCCC
Q 026214           48 PYRIFSAQELKLATNNYDQK------NVITEDWGCILYKGFWQERLISVMRFRESN----RDGHGSCINNIVYAAQMSHD  117 (241)
Q Consensus        48 ~~~~~~~~~~~~~~~~~~~~------~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~  117 (241)
                      ....|++.++..++++|+..      +.||+|+||.||+|.+++..||+|.+....    ....+.+.+|+.++..++||
T Consensus        11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~   90 (307)
T 2nru_A           11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE   90 (307)
T ss_dssp             CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEESSSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred             CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEECCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence            45779999999999999887      899999999999999999999999987532    22346789999999999999


Q ss_pred             ceeeEeeEEecCCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCee
Q 026214          118 HILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHIL  197 (241)
Q Consensus       118 niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nil  197 (241)
                      ||+++++++...+..+++|||+++++|.+++....  ...++++..+..++.|++.||.|||   +.+++|+||||+||+
T Consensus        91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nil  165 (307)
T 2nru_A           91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD--GTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANIL  165 (307)
T ss_dssp             TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGG--GCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEE
T ss_pred             CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhcc--CCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecCCCCHHHEE
Confidence            99999999999999999999999999999997542  2456899999999999999999999   999999999999999


Q ss_pred             EcCCCcEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          198 FNEENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       198 l~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ++.++.+||+|||++........... .....++..|++||
T Consensus       166 i~~~~~~kl~Dfg~~~~~~~~~~~~~-~~~~~g~~~y~aPE  205 (307)
T 2nru_A          166 LDEAFTAKISDFGLARASEKFAQTVM-TSRIVGTTAYMAPE  205 (307)
T ss_dssp             ECTTCCEEECCCTTCEECCSCSSCEE-CSSCCSCGGGCCHH
T ss_pred             EcCCCcEEEeeccccccccccccccc-ccccCCCcCcCChH
Confidence            99999999999999988765432211 11223455778887

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=9e-33  Score=233.53  Aligned_cols=170  Identities=14%  Similarity=0.208  Sum_probs=142.3

Q ss_pred             cCCCcCCeeecccceEEEEEEE-----CCeEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW-----QERLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA  135 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  135 (241)
                      +.|...+.||+|+||.||+|.+     .+..||||.+.... ....+.+.+|+.++..++||||+++++++...+..++|
T Consensus        49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  128 (325)
T 3kul_A           49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV  128 (325)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred             hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence            5577789999999999999998     34569999997653 23346789999999999999999999999999999999


Q ss_pred             EeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceec
Q 026214          136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI  215 (241)
Q Consensus       136 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~  215 (241)
                      |||+++++|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++.+
T Consensus       129 ~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~  201 (325)
T 3kul_A          129 TEYMENGSLDTFLRTH----DGQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVL  201 (325)
T ss_dssp             EECCTTCBHHHHHHTT----TTCSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred             eeCCCCCcHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEECCCCCEEECCCCccccc
Confidence            9999999999999654    346999999999999999999999   999999999999999999999999999999988


Q ss_pred             CCCCccccceeecCCceeeeecC
Q 026214          216 PEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ..+.........+..+..|++||
T Consensus       202 ~~~~~~~~~~~~~~~t~~y~aPE  224 (325)
T 3kul_A          202 EDDPDAAYTTTGGKIPIRWTAPE  224 (325)
T ss_dssp             C----CCEECC---CCGGGSCHH
T ss_pred             ccCccceeeccCCCCcccccCHh
Confidence            76654444444444555688887

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=2.7e-33  Score=235.89  Aligned_cols=183  Identities=28%  Similarity=0.360  Sum_probs=153.4

Q ss_pred             ccCHHHHHHHhcCCCcCCeeecccceEEEEEEE-CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecC
Q 026214           51 IFSAQELKLATNNYDQKNVITEDWGCILYKGFW-QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLET  129 (241)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  129 (241)
                      .++..++...+++|...+.||+|+||.||+|.+ ++..||+|++........+.+.+|+.+++.++||||+++++++...
T Consensus        28 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  107 (321)
T 2qkw_B           28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDER  107 (321)
T ss_dssp             --CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCT
T ss_pred             eecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC
Confidence            345556677889999999999999999999998 7899999998876656677899999999999999999999999999


Q ss_pred             CcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccc
Q 026214          130 PIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDF  209 (241)
Q Consensus       130 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~Df  209 (241)
                      +..++||||+++++|.+++..... ....+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.+||+||
T Consensus       108 ~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Df  183 (321)
T 2qkw_B          108 NEMILIYKYMENGNLKRHLYGSDL-PTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDF  183 (321)
T ss_dssp             TCCEEEEECCTTCBTGGGSSSSCC-CSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCSTTEEECTTCCEEECCC
T ss_pred             CeEEEEEEcCCCCcHHHHHhccCC-CccccCHHHHHHHHHHHHHHHHHhc---CCCeecCCCCHHHEEECCCCCEEEeec
Confidence            999999999999999999965422 2346899999999999999999999   999999999999999999999999999


Q ss_pred             cCceecCCCCccccceeecCCceeeeecC
Q 026214          210 SLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       210 G~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |++............ ....++..|++||
T Consensus       184 g~~~~~~~~~~~~~~-~~~~gt~~y~aPE  211 (321)
T 2qkw_B          184 GISKKGTELDQTHLS-TVVKGTLGYIDPE  211 (321)
T ss_dssp             TTCEECSSSSCCCCB-CCCEEETTTCCHH
T ss_pred             ccccccccccccccc-cccCCCccccCHH
Confidence            999876543221111 1112345678887

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=7.1e-33  Score=241.37  Aligned_cols=177  Identities=15%  Similarity=0.095  Sum_probs=151.9

Q ss_pred             CHHHHHHHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEe
Q 026214           53 SAQELKLATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCL  127 (241)
Q Consensus        53 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~  127 (241)
                      .+.++....++|...+.||+|+||.||+|.+  +++.||+|++.+..   ......+.+|..++..++||||+++++++.
T Consensus        52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~  131 (412)
T 2vd5_A           52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ  131 (412)
T ss_dssp             HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred             hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence            3455566678899999999999999999999  78999999997532   223456889999999999999999999999


Q ss_pred             cCCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEc
Q 026214          128 ETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMF  207 (241)
Q Consensus       128 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~  207 (241)
                      +.+..++||||+++|+|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+
T Consensus       132 ~~~~~~lVmE~~~gg~L~~~l~~~----~~~l~~~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILld~~g~vkL~  204 (412)
T 2vd5_A          132 DENYLYLVMEYYVGGDLLTLLSKF----GERIPAEMARFYLAEIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHIRLA  204 (412)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHHHH----SSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEEC
T ss_pred             eCCEEEEEEcCCCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccCHHHeeecCCCCEEEe
Confidence            999999999999999999999765    235899999999999999999999   9999999999999999999999999


Q ss_pred             cccCceecCCCCccccceeecCCceeeeecC
Q 026214          208 DFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       208 DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |||+|+.+..+......  ...++..|+|||
T Consensus       205 DFGla~~~~~~~~~~~~--~~~Gt~~Y~APE  233 (412)
T 2vd5_A          205 DFGSCLKLRADGTVRSL--VAVGTPDYLSPE  233 (412)
T ss_dssp             CCTTCEECCTTSCEECS--SCCSCGGGCCHH
T ss_pred             echhheeccCCCccccc--eeccccCcCCHH
Confidence            99999988766543222  223566788888

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.98  E-value=7.6e-33  Score=241.05  Aligned_cols=173  Identities=14%  Similarity=0.148  Sum_probs=147.9

Q ss_pred             HHHHHHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeecc---CCcchhhHHHHHHHHHhcCCCceeeEeeEEecC
Q 026214           55 QELKLATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRES---NRDGHGSCINNIVYAAQMSHDHILKLIGCCLET  129 (241)
Q Consensus        55 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  129 (241)
                      .++....++|...+.||+|+||.||+|.+  ++..||+|++...   .......+.+|+.++..++||||+++++++.+.
T Consensus        62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~  141 (410)
T 3v8s_A           62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD  141 (410)
T ss_dssp             HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence            34445567899999999999999999999  7899999998753   123345688999999999999999999999999


Q ss_pred             CcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccc
Q 026214          130 PIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDF  209 (241)
Q Consensus       130 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~Df  209 (241)
                      +..++||||+++|+|.+++...      .+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+||
T Consensus       142 ~~~~lV~E~~~gg~L~~~l~~~------~~~e~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DF  212 (410)
T 3v8s_A          142 RYLYMVMEYMPGGDLVNLMSNY------DVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADF  212 (410)
T ss_dssp             SEEEEEECCCTTEEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCC
T ss_pred             CEEEEEEeCCCCCcHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeeECCCCCEEEecc
Confidence            9999999999999999999543      4899999999999999999999   999999999999999999999999999


Q ss_pred             cCceecCCCCccccceeecCCceeeeecC
Q 026214          210 SLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       210 G~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |+|+.+.........  ...++..|+|||
T Consensus       213 G~a~~~~~~~~~~~~--~~~gt~~Y~APE  239 (410)
T 3v8s_A          213 GTCMKMNKEGMVRCD--TAVGTPDYISPE  239 (410)
T ss_dssp             TTCEECCTTSEEECC--SCCSCGGGCCHH
T ss_pred             ceeEeeccCCccccc--CCcCCccccCHH
Confidence            999987665432222  223556788888

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.98  E-value=7.3e-33  Score=230.41  Aligned_cols=170  Identities=21%  Similarity=0.257  Sum_probs=139.6

Q ss_pred             cCCCcCCeeecccceEEEEEEE------CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecC--Ccce
Q 026214           62 NNYDQKNVITEDWGCILYKGFW------QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLET--PIPI  133 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~  133 (241)
                      ++|...+.||+|+||.||+|.+      ++..||+|++........+.+.+|+.++..++||||+++++++...  ...+
T Consensus        10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   89 (295)
T 3ugc_A           10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK   89 (295)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCE
T ss_pred             HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceE
Confidence            5678889999999999999984      6889999999876655567899999999999999999999998653  5689


Q ss_pred             EEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCce
Q 026214          134 LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSI  213 (241)
Q Consensus       134 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~  213 (241)
                      +||||+++++|.+++...    ...+++..+..++.|++.||.|||   +.+|+|+||||+|||++.++.+||+|||++.
T Consensus        90 lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~  162 (295)
T 3ugc_A           90 LIMEYLPYGSLRDYLQKH----KERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTK  162 (295)
T ss_dssp             EEEECCTTCBHHHHHHHC----GGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCSCC
T ss_pred             EEEEeCCCCCHHHHHHhc----ccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHhhEEEcCCCeEEEccCcccc
Confidence            999999999999999765    345899999999999999999999   9999999999999999999999999999999


Q ss_pred             ecCCCCccccceeecCCceeeeecC
Q 026214          214 SIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .+..+............+..|+|||
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~y~aPE  187 (295)
T 3ugc_A          163 VLPQDKEFFKVKEPGESPIFWYAPE  187 (295)
T ss_dssp             -------------CTTCGGGGCCHH
T ss_pred             cccCCcceeeeccCCCCccceeCcH
Confidence            8876654444444445555688887

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.98  E-value=4.7e-32  Score=230.42  Aligned_cols=166  Identities=17%  Similarity=0.170  Sum_probs=143.4

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeecc---CCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRES---NRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      ++|...+.||+|+||.||+|.+  ++..||+|.+...   .......+.+|+.++..++||||+++++++...+..++||
T Consensus         5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   84 (337)
T 1o6l_A            5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM   84 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence            5688889999999999999998  7899999999764   2234567899999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||+++|+|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+|+...
T Consensus        85 E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~  156 (337)
T 1o6l_A           85 EYANGGELFFHLSRE-----RVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI  156 (337)
T ss_dssp             ECCTTCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred             eCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCCHHHEEECCCCCEEEeeccchhhcc
Confidence            999999999999664     35899999999999999999999   9999999999999999999999999999998754


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .+.....   ...++..|+|||
T Consensus       157 ~~~~~~~---~~~gt~~y~aPE  175 (337)
T 1o6l_A          157 SDGATMK---TFCGTPEYLAPE  175 (337)
T ss_dssp             CTTCCBC---CCEECGGGCCGG
T ss_pred             cCCCccc---ccccChhhCChh
Confidence            4332221   122455688888

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.98  E-value=8.5e-32  Score=230.88  Aligned_cols=166  Identities=20%  Similarity=0.187  Sum_probs=143.8

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCc------chhhHHHHHHHHHhcCCCceeeEeeEEecCCcc
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRD------GHGSCINNIVYAAQMSHDHILKLIGCCLETPIP  132 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  132 (241)
                      .+.|...+.||+|+||.||+|.+  ++..||+|.+......      ..+.+.+|+.++..++||||+++++++.+.+..
T Consensus        11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~   90 (361)
T 2yab_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV   90 (361)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence            46688899999999999999999  7899999999865322      246789999999999999999999999999999


Q ss_pred             eEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCC----cEEEcc
Q 026214          133 ILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEEN----VAKMFD  208 (241)
Q Consensus       133 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~----~~ki~D  208 (241)
                      ++||||+++|+|.+++..     ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++    .+||+|
T Consensus        91 ~lv~e~~~gg~L~~~l~~-----~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~~~vkl~D  162 (361)
T 2yab_A           91 VLILELVSGGELFDFLAQ-----KESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLID  162 (361)
T ss_dssp             EEEEECCCSCBHHHHHTT-----CSCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECC
T ss_pred             EEEEEcCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeCCCCCccCEEEEe
Confidence            999999999999999954     346999999999999999999999   99999999999999998776    799999


Q ss_pred             ccCceecCCCCccccceeecCCceeeeecC
Q 026214          209 FSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       209 fG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ||++..+..+....    ...++..|+|||
T Consensus       163 FG~a~~~~~~~~~~----~~~gt~~y~aPE  188 (361)
T 2yab_A          163 FGLAHEIEDGVEFK----NIFGTPEFVAPE  188 (361)
T ss_dssp             CSSCEECCTTCCCC----CCCSCGGGCCHH
T ss_pred             cCCceEcCCCCccc----cCCCCccEECch
Confidence            99999876653322    223556788887

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.98  E-value=1.6e-32  Score=236.29  Aligned_cols=171  Identities=17%  Similarity=0.202  Sum_probs=132.6

Q ss_pred             hcCCCcCCeeecccceEEEEEEE-----CCeEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceE
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW-----QERLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPIL  134 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  134 (241)
                      ..+|...+.||+|+||.||+|.+     ++..||||.+.... ....+.+.+|+.++.+++||||+++++++...+..++
T Consensus        44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  123 (373)
T 2qol_A           44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI  123 (373)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred             HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence            35788899999999999999987     35679999987643 2234679999999999999999999999999999999


Q ss_pred             EEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCcee
Q 026214          135 AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSIS  214 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~  214 (241)
                      ||||+++++|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++.
T Consensus       124 v~e~~~~~sL~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~  196 (373)
T 2qol_A          124 VTEYMENGSLDSFLRKH----DAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRV  196 (373)
T ss_dssp             EEECCTTCBHHHHHHTT----TTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred             EEeCCCCCcHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEEcCCCCEEECcCccccc
Confidence            99999999999999764    346899999999999999999999   99999999999999999999999999999998


Q ss_pred             cCCCCccccceeecCCceeeeecC
Q 026214          215 IPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +..+.........+..+..|++||
T Consensus       197 ~~~~~~~~~~~~~~~~~~~y~aPE  220 (373)
T 2qol_A          197 LEDDPEAAYTTRGGKIPIRWTSPE  220 (373)
T ss_dssp             -----------------CTTSCHH
T ss_pred             cccCCccceeccCCCcCCCccChh
Confidence            876544333333444455688887

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.98  E-value=5.8e-32  Score=227.81  Aligned_cols=172  Identities=20%  Similarity=0.296  Sum_probs=140.4

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC-cchhhHHHHHHHHHhcCCCceeeEeeEEecCC--------
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR-DGHGSCINNIVYAAQMSHDHILKLIGCCLETP--------  130 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--------  130 (241)
                      ++|...+.||+|+||.||+|.+  ++..||||++..... ...+.+.+|+.+++.++||||+++++++.+.+        
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   85 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEM   85 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHH
T ss_pred             hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhh
Confidence            4588889999999999999999  789999999975432 34577999999999999999999999986543        


Q ss_pred             -------------------------------------------------cceEEEeeCCCCCHHHHHhhcCCCCCCCCCH
Q 026214          131 -------------------------------------------------IPILAFESVEYGNLRDRILSASQPQTEPLLM  161 (241)
Q Consensus       131 -------------------------------------------------~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~  161 (241)
                                                                       ..+++|||+++++|.+++....  .....++
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~  163 (332)
T 3qd2_B           86 DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRC--SLEDREH  163 (332)
T ss_dssp             HC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCC--SGGGSCH
T ss_pred             hhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhccc--Cccchhh
Confidence                                                             2799999999999999997762  2445677


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCcccc---------ceeecCCce
Q 026214          162 KHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGA---------KCLKSERTE  232 (241)
Q Consensus       162 ~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~~~---------~~~~~~~~~  232 (241)
                      ..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++.+..+.....         ......++.
T Consensus       164 ~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  240 (332)
T 3qd2_B          164 GVCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTK  240 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CG
T ss_pred             HHHHHHHHHHHHHHHHHH---hCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCc
Confidence            788999999999999999   99999999999999999999999999999998876543211         112233566


Q ss_pred             eeeecC
Q 026214          233 ICCVRE  238 (241)
Q Consensus       233 ~~~~~e  238 (241)
                      .|+|||
T Consensus       241 ~y~aPE  246 (332)
T 3qd2_B          241 LYMSPE  246 (332)
T ss_dssp             GGSCHH
T ss_pred             CccChH
Confidence            788887

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.97  E-value=4.7e-32  Score=234.16  Aligned_cols=165  Identities=14%  Similarity=0.192  Sum_probs=144.3

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      ++|...+.||+|+||.||+|.+  ++..||+|.+....   ......+.+|+.++..++||||+++++++.+.+..++||
T Consensus        15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~   94 (384)
T 4fr4_A           15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV   94 (384)
T ss_dssp             GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence            5688899999999999999998  78899999987532   234567899999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||+.+|+|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+|..+.
T Consensus        95 e~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~  166 (384)
T 4fr4_A           95 DLLLGGDLRYHLQQN-----VHFKEETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLP  166 (384)
T ss_dssp             CCCTTEEHHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             ecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEECCCCCEEEeccceeeecc
Confidence            999999999999653     45899999999999999999999   9999999999999999999999999999999876


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .+....+    ..++..|+|||
T Consensus       167 ~~~~~~~----~~gt~~Y~aPE  184 (384)
T 4fr4_A          167 RETQITT----MAGTKPYMAPE  184 (384)
T ss_dssp             TTCCBCC----CCSCGGGCCGG
T ss_pred             CCCceec----cCCCccccCCe
Confidence            5543322    23455688888

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=1.2e-31  Score=226.37  Aligned_cols=166  Identities=14%  Similarity=0.123  Sum_probs=143.5

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      .+.|...+.||+|+||.||+|.+  ++..||+|.+.... .....+.+|+.++..++||||+++++++.+.+..++||||
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~   82 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF   82 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence            36788899999999999999999  78999999987543 3446688999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcC--CCcEEEccccCceecC
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNE--ENVAKMFDFSLSISIP  216 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~--~~~~ki~DfG~a~~~~  216 (241)
                      +++++|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.  ++.+||+|||++..+.
T Consensus        83 ~~g~~L~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH---~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~  155 (321)
T 1tki_A           83 ISGLDIFERINTS----AFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLK  155 (321)
T ss_dssp             CCCCBHHHHHTSS----SCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECC
T ss_pred             CCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECC
Confidence            9999999999543    346899999999999999999999   999999999999999987  7899999999999886


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .+....    ...++..|++||
T Consensus       156 ~~~~~~----~~~gt~~y~aPE  173 (321)
T 1tki_A          156 PGDNFR----LLFTAPEYYAPE  173 (321)
T ss_dssp             TTCEEE----EEESCGGGSCHH
T ss_pred             CCCccc----cccCChhhcCcH
Confidence            654322    222345678887

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.97  E-value=5.8e-32  Score=231.24  Aligned_cols=169  Identities=20%  Similarity=0.216  Sum_probs=140.7

Q ss_pred             HHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeecc---CCcchhhHHHHHHHHHhc-CCCceeeEeeEEecCCcc
Q 026214           59 LATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRES---NRDGHGSCINNIVYAAQM-SHDHILKLIGCCLETPIP  132 (241)
Q Consensus        59 ~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~  132 (241)
                      ...++|...+.||+|+||.||+|.+  ++..||+|.+...   .......+.+|..++..+ +||||+++++++.+.+..
T Consensus        20 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~   99 (353)
T 3txo_A           20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRL   99 (353)
T ss_dssp             ---CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred             CchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEE
Confidence            3457899999999999999999998  7899999999764   223456688999999988 799999999999999999


Q ss_pred             eEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCc
Q 026214          133 ILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS  212 (241)
Q Consensus       133 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a  212 (241)
                      ++||||+++|+|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+|
T Consensus       100 ~lv~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NILl~~~g~ikL~DFG~a  171 (353)
T 3txo_A          100 FFVMEFVNGGDLMFHIQKS-----RRFDEARARFYAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMC  171 (353)
T ss_dssp             EEEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred             EEEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCCHHHEEECCCCCEEEccccce
Confidence            9999999999999999765     34899999999999999999999   999999999999999999999999999999


Q ss_pred             eecCCCCccccceeecCCceeeeecC
Q 026214          213 ISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +.........   ....++..|+|||
T Consensus       172 ~~~~~~~~~~---~~~~gt~~y~aPE  194 (353)
T 3txo_A          172 KEGICNGVTT---ATFCGTPDYIAPE  194 (353)
T ss_dssp             BCSCC------------CCGGGCCHH
T ss_pred             eecccCCccc---cccCCCcCeEChh
Confidence            8654433222   1223455788887

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.97  E-value=2.2e-32  Score=229.72  Aligned_cols=179  Identities=20%  Similarity=0.294  Sum_probs=138.7

Q ss_pred             cCHHHHHHHhcCCCcCCeeecccceEEEEEEECCeEEEEEEeeccCC--cchhhHHHHHHHHHhcCCCceeeEeeEEecC
Q 026214           52 FSAQELKLATNNYDQKNVITEDWGCILYKGFWQERLISVMRFRESNR--DGHGSCINNIVYAAQMSHDHILKLIGCCLET  129 (241)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  129 (241)
                      ++..++....++|...+.||+|+||.||+|.+++..||+|.+.....  ...+.+.+|+.++.+++||||+++++++...
T Consensus        27 ~~~~~~~i~~~~y~i~~~lG~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~  106 (309)
T 3p86_A           27 MDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQP  106 (309)
T ss_dssp             -----CBCCGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST
T ss_pred             CCcccccCChhHceeeeEeecCCCeEEEEEEECCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC
Confidence            34445555667888899999999999999999999999999876532  2345789999999999999999999999999


Q ss_pred             CcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCC--eEEccCCCCCeeEcCCCcEEEc
Q 026214          130 PIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRP--IVYRDFKTAHILFNEENVAKMF  207 (241)
Q Consensus       130 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~--ivH~dlk~~Nill~~~~~~ki~  207 (241)
                      +..++||||+++++|.+++....  ....+++..+..++.|++.||.|||   +.+  |+||||||+|||++.++.+||+
T Consensus       107 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH---~~~~~ivH~Dikp~NIll~~~~~~kL~  181 (309)
T 3p86_A          107 PNLSIVTEYLSRGSLYRLLHKSG--AREQLDERRRLSMAYDVAKGMNYLH---NRNPPIVHRNLKSPNLLVDKKYTVKVC  181 (309)
T ss_dssp             TCCEEEEECCTTCBHHHHHHSTT--HHHHSCHHHHHHHHHHHHHHHHHHH---TSSSCCCCTTCCGGGEEECTTCCEEEC
T ss_pred             CceEEEEecCCCCcHHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHH---cCCCCEECCCCChhhEEEeCCCcEEEC
Confidence            99999999999999999996541  1234899999999999999999999   888  9999999999999999999999


Q ss_pred             cccCceecCCCCccccceeecCCceeeeecC
Q 026214          208 DFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       208 DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |||+++.........   ....++..|+|||
T Consensus       182 Dfg~a~~~~~~~~~~---~~~~gt~~y~aPE  209 (309)
T 3p86_A          182 DFGLSRLKASTFLSS---KSAAGTPEWMAPE  209 (309)
T ss_dssp             CCC--------------------CCTTSCHH
T ss_pred             CCCCCcccccccccc---ccCCCCccccChh
Confidence            999998655442221   1223455677887

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.97  E-value=9.9e-32  Score=223.97  Aligned_cols=166  Identities=18%  Similarity=0.230  Sum_probs=138.1

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC--------------------------cchhhHHHHHHHHH
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR--------------------------DGHGSCINNIVYAA  112 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--------------------------~~~~~~~~E~~~l~  112 (241)
                      .++|...+.||+|+||.||+|.+  ++..||+|.+.....                          ...+.+.+|+.+++
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   91 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK   91 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred             ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence            46788899999999999999998  789999999875431                          12356899999999


Q ss_pred             hcCCCceeeEeeEEec--CCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEcc
Q 026214          113 QMSHDHILKLIGCCLE--TPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRD  190 (241)
Q Consensus       113 ~l~h~niv~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~d  190 (241)
                      .++||||+++++++..  .+..++||||+++++|.+++      ....+++..+..++.|++.||.|||   +.+|+|||
T Consensus        92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~------~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~D  162 (298)
T 2zv2_A           92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP------TLKPLSEDQARFYFQDLIKGIEYLH---YQKIIHRD  162 (298)
T ss_dssp             TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS------CSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCC
T ss_pred             hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccC
Confidence            9999999999999986  56789999999999998765      3456999999999999999999999   99999999


Q ss_pred             CCCCCeeEcCCCcEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          191 FKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       191 lk~~Nill~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |||+|||++.++.+||+|||++..+.......   ....++..|+|||
T Consensus       163 lkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~---~~~~gt~~y~aPE  207 (298)
T 2zv2_A          163 IKPSNLLVGEDGHIKIADFGVSNEFKGSDALL---SNTVGTPAFMAPE  207 (298)
T ss_dssp             CCGGGEEECTTSCEEECCCTTCEECSSSSCEE---CCCCSCGGGCCGG
T ss_pred             CCHHHEEECCCCCEEEecCCCccccccccccc---cCCcCCccccChh
Confidence            99999999999999999999999876543321   1234566788888

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.97  E-value=1.2e-31  Score=223.48  Aligned_cols=168  Identities=20%  Similarity=0.227  Sum_probs=139.5

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCc---chhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEE
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRD---GHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA  135 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  135 (241)
                      .+.|...+.||+|+||.||+|.+  ++..||+|.+......   ..+.+.+|+.++..++||||+++++++...+..++|
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv   89 (294)
T 4eqm_A           10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV   89 (294)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence            35688899999999999999998  7899999998654322   246789999999999999999999999999999999


Q ss_pred             EeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceec
Q 026214          136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI  215 (241)
Q Consensus       136 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~  215 (241)
                      |||+++++|.+++...     .++++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++..+
T Consensus        90 ~e~~~g~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~  161 (294)
T 4eqm_A           90 MEYIEGPTLSEYIESH-----GPLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKAL  161 (294)
T ss_dssp             EECCCSCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC
T ss_pred             EeCCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEEeCCCcccc
Confidence            9999999999999765     35899999999999999999999   999999999999999999999999999999877


Q ss_pred             CCCCccccceeecCCceeeeecC
Q 026214          216 PEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .........  ...++..|++||
T Consensus       162 ~~~~~~~~~--~~~gt~~y~aPE  182 (294)
T 4eqm_A          162 SETSLTQTN--HVLGTVQYFSPE  182 (294)
T ss_dssp             ---------------CCSSCCHH
T ss_pred             ccccccccC--ccccCccccCHh
Confidence            554332222  223455678887

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.97  E-value=2.1e-31  Score=218.59  Aligned_cols=168  Identities=15%  Similarity=0.227  Sum_probs=144.7

Q ss_pred             hcCCCcCCeeecccceEEEEEEE-CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeC
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW-QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESV  139 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  139 (241)
                      .++|...+.||+|+||.||+|.+ ++..||+|.+.... .....+.+|+.++..++||||+++++++...+..++||||+
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   85 (268)
T 3sxs_A            7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI   85 (268)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred             hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence            45688889999999999999998 77789999997654 34567999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCC
Q 026214          140 EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGG  219 (241)
Q Consensus       140 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~  219 (241)
                      ++++|.+++...    ...+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.++|+|||++.....+.
T Consensus        86 ~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~  158 (268)
T 3sxs_A           86 SNGCLLNYLRSH----GKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ  158 (268)
T ss_dssp             TTCBHHHHHHHH----GGGCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTC
T ss_pred             CCCcHHHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCcceEEECCCCCEEEccCccceecchhh
Confidence            999999999765    345899999999999999999999   9999999999999999999999999999999876654


Q ss_pred             ccccceeecCCceeeeecC
Q 026214          220 TSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~e  238 (241)
                      ....  .....+..|++||
T Consensus       159 ~~~~--~~~~~~~~y~aPE  175 (268)
T 3sxs_A          159 YVSS--VGTKFPVKWSAPE  175 (268)
T ss_dssp             EEEC--CSCCCCGGGCCHH
T ss_pred             hhcc--cCCCcCcccCCHH
Confidence            3222  2222344578887

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.97  E-value=1.3e-31  Score=232.24  Aligned_cols=167  Identities=20%  Similarity=0.227  Sum_probs=141.5

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhc-CCCceeeEeeEEecCCcceE
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQM-SHDHILKLIGCCLETPIPIL  134 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l  134 (241)
                      .++|...++||+|+||.||+|.+  ++..||+|++....   ......+.+|..++.++ +||||+++++++.+.+..++
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  130 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF  130 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence            45688899999999999999998  78999999998643   22345688999999887 89999999999999999999


Q ss_pred             EEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCcee
Q 026214          135 AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSIS  214 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~  214 (241)
                      ||||+++|+|.+++...     ..+++..+..++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+|+.
T Consensus       131 V~E~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFGla~~  202 (396)
T 4dc2_A          131 VIEYVNGGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE  202 (396)
T ss_dssp             EEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred             EEEcCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEECCCCCEEEeecceeee
Confidence            99999999999999765     35899999999999999999999   99999999999999999999999999999986


Q ss_pred             cCCCCccccceeecCCceeeeecC
Q 026214          215 IPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .........   ...++..|+|||
T Consensus       203 ~~~~~~~~~---~~~gt~~Y~aPE  223 (396)
T 4dc2_A          203 GLRPGDTTS---TFCGTPNYIAPE  223 (396)
T ss_dssp             CCCTTCCBC---CCCBCGGGCCHH
T ss_pred             cccCCCccc---cccCCcccCCch
Confidence            433322211   223456788887

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.97  E-value=2.2e-31  Score=221.23  Aligned_cols=166  Identities=17%  Similarity=0.220  Sum_probs=141.3

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC--cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEe
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR--DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFE  137 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  137 (241)
                      ++|...+.||+|+||.||+|.+  ++..||+|.+.....  .....+.+|+.++..++||||+++++++.+++..++|||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   81 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence            4688889999999999999999  789999999976432  234678899999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCC
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE  217 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~  217 (241)
                      |++ ++|.+.+...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++.....
T Consensus        82 ~~~-~~l~~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lH---~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~  153 (292)
T 3o0g_A           82 FCD-QDLKKYFDSC----NGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGI  153 (292)
T ss_dssp             CCS-EEHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCS
T ss_pred             cCC-CCHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceecCC
Confidence            998 4777777554    356999999999999999999999   99999999999999999999999999999998765


Q ss_pred             CCccccceeecCCceeeeecC
Q 026214          218 GGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +.....   ...++..|+|||
T Consensus       154 ~~~~~~---~~~~t~~y~aPE  171 (292)
T 3o0g_A          154 PVRCYS---AEVVTLWYRPPD  171 (292)
T ss_dssp             CCSCCC---SCCSCGGGCCHH
T ss_pred             cccccc---CCccccCCcChH
Confidence            433222   223355688887

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.97  E-value=2.4e-31  Score=224.82  Aligned_cols=165  Identities=19%  Similarity=0.190  Sum_probs=142.3

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCc------chhhHHHHHHHHHhcCCCceeeEeeEEecCCcce
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRD------GHGSCINNIVYAAQMSHDHILKLIGCCLETPIPI  133 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  133 (241)
                      +.|...+.||+|+||.||+|.+  ++..||+|.+......      ....+.+|+.++..++||||+++++++......+
T Consensus        11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   90 (326)
T 2y0a_A           11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   90 (326)
T ss_dssp             HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            4588899999999999999999  7899999998764321      3467899999999999999999999999999999


Q ss_pred             EEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCC----cEEEccc
Q 026214          134 LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEEN----VAKMFDF  209 (241)
Q Consensus       134 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~----~~ki~Df  209 (241)
                      +||||+++++|.+++..     ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++    .+||+||
T Consensus        91 lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Df  162 (326)
T 2y0a_A           91 LILELVAGGELFDFLAE-----KESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDF  162 (326)
T ss_dssp             EEEECCCSCBHHHHHTT-----SSCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCSSSSSCCEEECCC
T ss_pred             EEEEcCCCCCHHHHHHh-----cCCcCHHHHHHHHHHHHHHHHHHH---HCCeEcCCCCHHHEEEecCCCCCCCEEEEEC
Confidence            99999999999999954     345899999999999999999999   99999999999999998877    7999999


Q ss_pred             cCceecCCCCccccceeecCCceeeeecC
Q 026214          210 SLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       210 G~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |++..+..+....    ...++..|+|||
T Consensus       163 g~a~~~~~~~~~~----~~~gt~~y~aPE  187 (326)
T 2y0a_A          163 GLAHKIDFGNEFK----NIFGTPEFVAPE  187 (326)
T ss_dssp             TTCEECCTTSCCC----CCCSCTTTCCHH
T ss_pred             CCCeECCCCCccc----cccCCcCcCCce
Confidence            9999886543222    123455678887

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.97  E-value=5.3e-32  Score=228.36  Aligned_cols=168  Identities=21%  Similarity=0.231  Sum_probs=141.6

Q ss_pred             HhcCCCcCCeeecccceEEEEEEECCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCc----ceEE
Q 026214           60 ATNNYDQKNVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPI----PILA  135 (241)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----~~lv  135 (241)
                      ..++|...++||+|+||.||+|.+.+..||||++.... .....+.+|+.++..++||||+++++++.....    .++|
T Consensus        22 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv  100 (322)
T 3soc_A           22 QSMPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI  100 (322)
T ss_dssp             TTEEEEEEEEEECSTTCEEEEEEETTEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred             chhhchhhheecccCceEEEEEEECCCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence            44678889999999999999999999999999997643 233456678999999999999999999987543    6999


Q ss_pred             EeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCC----------CeEEccCCCCCeeEcCCCcEE
Q 026214          136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPR----------PIVYRDFKTAHILFNEENVAK  205 (241)
Q Consensus       136 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~----------~ivH~dlk~~Nill~~~~~~k  205 (241)
                      |||+++|+|.+++...      .+++..+..++.|++.||.|||   +.          +|+||||||+|||++.++.+|
T Consensus       101 ~e~~~~g~L~~~l~~~------~~~~~~~~~i~~qi~~al~~LH---~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~k  171 (322)
T 3soc_A          101 TAFHEKGSLSDFLKAN------VVSWNELCHIAETMARGLAYLH---EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTAC  171 (322)
T ss_dssp             EECCTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHT---CCEEEETTEEECEEECSCCSGGGEEECTTCCEE
T ss_pred             EecCCCCCHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHH---hhccccccccCCCEEeCCCChHhEEECCCCeEE
Confidence            9999999999999553      4899999999999999999999   88          999999999999999999999


Q ss_pred             EccccCceecCCCCccccceeecCCceeeeecC
Q 026214          206 MFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       206 i~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |+|||+|+.+........ .....++..|+|||
T Consensus       172 L~DFg~a~~~~~~~~~~~-~~~~~gt~~y~aPE  203 (322)
T 3soc_A          172 IADFGLALKFEAGKSAGD-THGQVGTRRYMAPE  203 (322)
T ss_dssp             ECCCTTCEEECTTSCCCC-CTTCCCCGGGCCHH
T ss_pred             EccCCcccccccccCccc-cccCccCccccCHh
Confidence            999999998865543221 11223566788887

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.97  E-value=1.6e-31  Score=224.52  Aligned_cols=168  Identities=20%  Similarity=0.226  Sum_probs=141.3

Q ss_pred             HhcCCCcCCeeecccceEEEEEEE-CCeEEEEEEeeccCC--cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           60 ATNNYDQKNVITEDWGCILYKGFW-QERLISVMRFRESNR--DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      ..++|...+.||+|+||.||+|.+ ++..||+|++.....  .....+.+|+.+++.++||||+++++++.+.+..++||
T Consensus        19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   98 (311)
T 3niz_A           19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF   98 (311)
T ss_dssp             SSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred             hHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence            347788899999999999999999 889999999875432  23467889999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||++ ++|.+.+...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++.+.
T Consensus        99 e~~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~  170 (311)
T 3niz_A           99 EFME-KDLKKVLDEN----KTGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFG  170 (311)
T ss_dssp             ECCS-EEHHHHHHTC----TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEETT
T ss_pred             cCCC-CCHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCchHhEEECCCCCEEEccCcCceecC
Confidence            9998 5898888664    445899999999999999999999   9999999999999999999999999999999876


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .+.....   ...++..|+|||
T Consensus       171 ~~~~~~~---~~~~t~~y~aPE  189 (311)
T 3niz_A          171 IPVRSYT---HEVVTLWYRAPD  189 (311)
T ss_dssp             SCCC------CCCCCCTTCCHH
T ss_pred             CCccccc---CCcccCCcCCHH
Confidence            5433222   123356678887

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.97  E-value=2.1e-31  Score=224.67  Aligned_cols=163  Identities=16%  Similarity=0.197  Sum_probs=141.9

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      ++|...+.||+|+||.||+|.+  ++..||+|.+....   ......+.+|..++..++||||+++++++.+....++||
T Consensus         6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~   85 (318)
T 1fot_A            6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   85 (318)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence            5688889999999999999998  78999999997642   234566889999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||+++|+|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++...
T Consensus        86 e~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~  157 (318)
T 1fot_A           86 DYIEGGELFSLLRKS-----QRFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVP  157 (318)
T ss_dssp             CCCCSCBHHHHHHHT-----SSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEECS
T ss_pred             eCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChheEEEcCCCCEEEeecCcceecC
Confidence            999999999999664     35899999999999999999999   9999999999999999999999999999999765


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ....      ...++..|+|||
T Consensus       158 ~~~~------~~~gt~~y~aPE  173 (318)
T 1fot_A          158 DVTY------TLCGTPDYIAPE  173 (318)
T ss_dssp             SCBC------CCCSCTTTCCHH
T ss_pred             Cccc------cccCCccccCHh
Confidence            4321      123455678887

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.97  E-value=1.9e-31  Score=227.43  Aligned_cols=170  Identities=16%  Similarity=0.205  Sum_probs=143.6

Q ss_pred             HHHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhc-CCCceeeEeeEEecCCc
Q 026214           58 KLATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQM-SHDHILKLIGCCLETPI  131 (241)
Q Consensus        58 ~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~  131 (241)
                      ....++|...+.||+|+||.||+|.+  ++..||+|.+....   ......+..|..++..+ +||||+++++++.+.+.
T Consensus        13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~   92 (345)
T 1xjd_A           13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN   92 (345)
T ss_dssp             ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred             CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence            45567899999999999999999999  78999999997642   23456688899999887 99999999999999999


Q ss_pred             ceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccC
Q 026214          132 PILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL  211 (241)
Q Consensus       132 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~  211 (241)
                      .++||||+++|+|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+
T Consensus        93 ~~lv~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~  164 (345)
T 1xjd_A           93 LFFVMEYLNGGDLMYHIQSC-----HKFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGM  164 (345)
T ss_dssp             EEEEEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTT
T ss_pred             EEEEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCChhhEEECCCCCEEEeEChh
Confidence            99999999999999999764     34899999999999999999999   99999999999999999999999999999


Q ss_pred             ceecCCCCccccceeecCCceeeeecC
Q 026214          212 SISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       212 a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |+.........   ....++..|+|||
T Consensus       165 a~~~~~~~~~~---~~~~gt~~y~aPE  188 (345)
T 1xjd_A          165 CKENMLGDAKT---NTFCGTPDYIAPE  188 (345)
T ss_dssp             CBCCCCTTCCB---CCCCSCGGGCCHH
T ss_pred             hhhcccCCCcc---cCCCCCcccCChh
Confidence            98654332221   1223456788887

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.97  E-value=2.1e-31  Score=222.07  Aligned_cols=170  Identities=19%  Similarity=0.230  Sum_probs=144.0

Q ss_pred             cCCCcCCeeecccceEEEEEEE------CCeEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEecC--Ccc
Q 026214           62 NNYDQKNVITEDWGCILYKGFW------QERLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLET--PIP  132 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~  132 (241)
                      ..|...+.||+|+||.||+|.+      ++..||+|.+.... ......+.+|+.++..++||||+++++++...  ...
T Consensus        21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~  100 (302)
T 4e5w_A           21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI  100 (302)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred             hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence            4477889999999999999983      78999999987543 33457789999999999999999999999876  668


Q ss_pred             eEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCc
Q 026214          133 ILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS  212 (241)
Q Consensus       133 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a  212 (241)
                      +++|||+++++|.+++...    ...+++..+..++.|++.||.|||   +.+|+|+||||+||+++.++.++|+|||++
T Consensus       101 ~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~  173 (302)
T 4e5w_A          101 KLIMEFLPSGSLKEYLPKN----KNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLT  173 (302)
T ss_dssp             EEEEECCTTCBHHHHHHHH----TTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTC
T ss_pred             EEEEEeCCCCcHHHHHHhc----cccCCHHHHHHHHHHHHHHHHHhh---cCCcccCCCchheEEEcCCCCEEECccccc
Confidence            9999999999999999665    345899999999999999999999   999999999999999999999999999999


Q ss_pred             eecCCCCccccceeecCCceeeeecC
Q 026214          213 ISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ..+..+............+..|++||
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~~y~aPE  199 (302)
T 4e5w_A          174 KAIETDKEYYTVKDDRDSPVFWYAPE  199 (302)
T ss_dssp             EECCTTCCEEECCCCTTCCGGGCCHH
T ss_pred             ccccCCCcceeccCCCCCCccccCCe
Confidence            98877655444444445566688887

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.97  E-value=7.4e-32  Score=221.49  Aligned_cols=168  Identities=20%  Similarity=0.325  Sum_probs=143.5

Q ss_pred             hcCCCcCCeeecccceEEEEEEE-CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeC
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW-QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESV  139 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  139 (241)
                      .++|...+.||+|+||.||+|.+ ++..||+|.+.... ...+.+.+|+.++.+++||||+++++++.+.+..++||||+
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   87 (269)
T 4hcu_A            9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM   87 (269)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred             hhhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence            35678889999999999999999 88899999998654 34567999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCC
Q 026214          140 EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGG  219 (241)
Q Consensus       140 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~  219 (241)
                      ++++|.+++...    ...+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.++|+|||++.....+.
T Consensus        88 ~~~~L~~~l~~~----~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~  160 (269)
T 4hcu_A           88 EHGCLSDYLRTQ----RGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ  160 (269)
T ss_dssp             TTCBHHHHHHTT----TTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHH
T ss_pred             CCCcHHHHHHhc----CcccCHHHHHHHHHHHHHHHHHHH---hCCeecCCcchheEEEcCCCCEEeccccccccccccc
Confidence            999999999664    446899999999999999999999   9999999999999999999999999999998765442


Q ss_pred             ccccceeecCCceeeeecC
Q 026214          220 TSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~e  238 (241)
                      ....  .....+..|++||
T Consensus       161 ~~~~--~~~~~~~~y~aPE  177 (269)
T 4hcu_A          161 YTSS--TGTKFPVKWASPE  177 (269)
T ss_dssp             HHST--TSTTCCGGGCCHH
T ss_pred             cccc--cCcccccccCCHH
Confidence            2211  1122234577777

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.97  E-value=2.2e-31  Score=230.30  Aligned_cols=167  Identities=17%  Similarity=0.170  Sum_probs=144.8

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      .+.|...+.||+|+||.||+|.+  ++..||+|.+..........+.+|+.++..++||||+++++++.+....++||||
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~  129 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF  129 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence            35788899999999999999999  7899999998766544556789999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcC--CCcEEEccccCceecC
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNE--ENVAKMFDFSLSISIP  216 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~--~~~~ki~DfG~a~~~~  216 (241)
                      +++++|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.  .+.+||+|||++..+.
T Consensus       130 ~~gg~L~~~l~~~----~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~  202 (387)
T 1kob_A          130 LSGGELFDRIAAE----DYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLN  202 (387)
T ss_dssp             CCCCBHHHHTTCT----TCCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECC
T ss_pred             CCCCcHHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccchHHeEEecCCCCceEEEecccceecC
Confidence            9999999999553    346899999999999999999999   999999999999999974  5789999999999886


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .+....    ...++..|+|||
T Consensus       203 ~~~~~~----~~~gt~~y~aPE  220 (387)
T 1kob_A          203 PDEIVK----VTTATAEFAAPE  220 (387)
T ss_dssp             TTSCEE----EECSSGGGCCHH
T ss_pred             CCccee----eeccCCCccCch
Confidence            654322    223566788887

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.97  E-value=1.7e-31  Score=228.90  Aligned_cols=176  Identities=13%  Similarity=0.090  Sum_probs=144.8

Q ss_pred             HHHHHhcCCCcCCeeecccceEEEEEE-----E--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcC---CCceeeEeeE
Q 026214           56 ELKLATNNYDQKNVITEDWGCILYKGF-----W--QERLISVMRFRESNRDGHGSCINNIVYAAQMS---HDHILKLIGC  125 (241)
Q Consensus        56 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~-----~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~  125 (241)
                      ++....+.|...+.||+|+||.||+|.     .  ++..||+|.+...   ....+..|+.++..++   |+||++++++
T Consensus        59 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~  135 (365)
T 3e7e_A           59 EFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSA  135 (365)
T ss_dssp             EEECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEE
T ss_pred             eEEECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhhee
Confidence            334455778888999999999999994     3  7889999998754   3556788888888886   9999999999


Q ss_pred             EecCCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcC-----
Q 026214          126 CLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNE-----  200 (241)
Q Consensus       126 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~-----  200 (241)
                      +...+..++||||+++|+|.+++..........+++..+..++.|++.||.|||   +.+|+||||||+|||++.     
T Consensus       136 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~ivHrDiKp~NIll~~~~~~~  212 (365)
T 3e7e_A          136 HLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQ  212 (365)
T ss_dssp             EECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECGGGTCC
T ss_pred             eecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEecccccCc
Confidence            999999999999999999999997542223566999999999999999999999   999999999999999988     


Q ss_pred             ------CCcEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          201 ------ENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       201 ------~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                            ++.+||+|||+|+.+...... .......++..|+|||
T Consensus       213 ~~~~~~~~~~kl~DFG~a~~~~~~~~~-~~~~~~~gt~~y~aPE  255 (365)
T 3e7e_A          213 DDEDDLSAGLALIDLGQSIDMKLFPKG-TIFTAKCETSGFQCVE  255 (365)
T ss_dssp             ------CTTEEECCCTTCEEGGGSCTT-EEECCSSCTTSCCCHH
T ss_pred             cccccccCCEEEeeCchhhhhhccCCC-ceeeeecCCCCCCChH
Confidence                  899999999999876532211 1112234567789998

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.97  E-value=2.5e-31  Score=226.67  Aligned_cols=166  Identities=20%  Similarity=0.221  Sum_probs=141.8

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC---cchhhHHHHHHHHHhc-CCCceeeEeeEEecCCcceEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR---DGHGSCINNIVYAAQM-SHDHILKLIGCCLETPIPILA  135 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv  135 (241)
                      ++|...+.||+|+||.||+|.+  ++..||+|.+.....   .....+.+|..++..+ +||||+++++++.+.+..++|
T Consensus         9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv   88 (345)
T 3a8x_A            9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV   88 (345)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence            4688889999999999999998  789999999986532   2245678899999988 899999999999999999999


Q ss_pred             EeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceec
Q 026214          136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI  215 (241)
Q Consensus       136 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~  215 (241)
                      |||+++|+|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+|+..
T Consensus        89 ~e~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~  160 (345)
T 3a8x_A           89 IEYVNGGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG  160 (345)
T ss_dssp             ECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCGGGCBCS
T ss_pred             EeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEEeccccccc
Confidence            9999999999999664     35899999999999999999999   999999999999999999999999999999865


Q ss_pred             CCCCccccceeecCCceeeeecC
Q 026214          216 PEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .......   ....++..|+|||
T Consensus       161 ~~~~~~~---~~~~gt~~y~aPE  180 (345)
T 3a8x_A          161 LRPGDTT---STFCGTPNYIAPE  180 (345)
T ss_dssp             CCTTCCB---CCCCSCGGGCCHH
T ss_pred             cCCCCcc---cccCCCccccCcc
Confidence            4332221   1223456788887

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.97  E-value=3.2e-31  Score=223.02  Aligned_cols=168  Identities=17%  Similarity=0.194  Sum_probs=142.8

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEecCC--cceEEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLETP--IPILAF  136 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv~  136 (241)
                      +.|...+.||+|+||.||+|.+  ++..||+|++.... ......+.+|+.+++.++||||+++++++....  ..++||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   88 (319)
T 4euu_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM   88 (319)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence            5678889999999999999999  68999999997643 234567889999999999999999999998765  779999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeE----cCCCcEEEccccCc
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILF----NEENVAKMFDFSLS  212 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill----~~~~~~ki~DfG~a  212 (241)
                      ||+++++|.+++....  ....+++..+..++.|++.||.|||   +.+|+||||||+|||+    +.++.+||+|||++
T Consensus        89 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a  163 (319)
T 4euu_A           89 EFCPCGSLYTVLEEPS--NAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA  163 (319)
T ss_dssp             ECCTTCBHHHHHHSGG--GTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEECTTSCEEEEECCCTTC
T ss_pred             eCCCCCCHHHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEeccCCCCceEEEccCCCc
Confidence            9999999999997652  2334899999999999999999999   9999999999999999    77888999999999


Q ss_pred             eecCCCCccccceeecCCceeeeecC
Q 026214          213 ISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +.+..+.....    ..++..|++||
T Consensus       164 ~~~~~~~~~~~----~~gt~~y~aPE  185 (319)
T 4euu_A          164 RELEDDEQFVS----LYGTEEYLHPD  185 (319)
T ss_dssp             EECCTTCCBCC----CCSCGGGCCHH
T ss_pred             eecCCCCceee----cccCCCccCHH
Confidence            98866543322    23456678887

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.97  E-value=2.4e-31  Score=228.76  Aligned_cols=174  Identities=17%  Similarity=0.246  Sum_probs=144.1

Q ss_pred             hcCCCcCCeeecccceEEEEEEE---------CCeEEEEEEeeccCC-cchhhHHHHHHHHHhc-CCCceeeEeeEEecC
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW---------QERLISVMRFRESNR-DGHGSCINNIVYAAQM-SHDHILKLIGCCLET  129 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~---------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~  129 (241)
                      .++|...+.||+|+||.||+|.+         ++..||+|.+..... .....+.+|+.++..+ +||||+++++++...
T Consensus        80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~  159 (370)
T 2psq_A           80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  159 (370)
T ss_dssp             GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred             HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence            35677888999999999999986         235799999976532 2346789999999999 899999999999999


Q ss_pred             CcceEEEeeCCCCCHHHHHhhcCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeE
Q 026214          130 PIPILAFESVEYGNLRDRILSASQ-----------PQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILF  198 (241)
Q Consensus       130 ~~~~lv~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill  198 (241)
                      +..++||||+++|+|.+++.....           .....+++..+..++.|++.||.|||   +.+|+||||||+|||+
T Consensus       160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll  236 (370)
T 2psq_A          160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV  236 (370)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEE
T ss_pred             CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchhhEEE
Confidence            999999999999999999976521           01245899999999999999999999   9999999999999999


Q ss_pred             cCCCcEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          199 NEENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       199 ~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +.++.+||+|||+++.+....... ....+..+..|+|||
T Consensus       237 ~~~~~~kl~DFG~a~~~~~~~~~~-~~~~~~~t~~y~aPE  275 (370)
T 2psq_A          237 TENNVMKIADFGLARDINNIDYYK-KTTNGRLPVKWMAPE  275 (370)
T ss_dssp             CTTCCEEECCCSSCEETTCCCTTC-TTTTTTSCGGGCCHH
T ss_pred             CCCCCEEEccccCCcccCccccee-cccCCCcccceECHh
Confidence            999999999999999876543221 122334455688888

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.97  E-value=1.4e-31  Score=226.09  Aligned_cols=168  Identities=20%  Similarity=0.199  Sum_probs=140.9

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC-cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR-DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      ++|...+.||+|+||.||+|.+  ++..||+|.+..... ...+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus         7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~   86 (323)
T 3tki_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   86 (323)
T ss_dssp             TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEc
Confidence            5788899999999999999998  789999999875432 2346789999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      +++++|.+++..     ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++..+..+
T Consensus        87 ~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~  158 (323)
T 3tki_A           87 CSGGELFDRIEP-----DIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN  158 (323)
T ss_dssp             CTTEEGGGGSBT-----TTBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred             CCCCcHHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccccchHHEEEeCCCCEEEEEeeccceeccC
Confidence            999999999844     345999999999999999999999   999999999999999999999999999999877544


Q ss_pred             CccccceeecCCceeeeecC
Q 026214          219 GTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ..... .....++..|+|||
T Consensus       159 ~~~~~-~~~~~gt~~y~aPE  177 (323)
T 3tki_A          159 NRERL-LNKMCGTLPYVAPE  177 (323)
T ss_dssp             TEECC-BCSCCSCGGGSCHH
T ss_pred             Ccccc-cCCCccCcCccCcH
Confidence            32211 11223455678887

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.97  E-value=5.7e-32  Score=226.95  Aligned_cols=170  Identities=20%  Similarity=0.234  Sum_probs=135.2

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcc---hhhHHHHHHHHHhcCCCceeeEeeEEecCCcc---
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDG---HGSCINNIVYAAQMSHDHILKLIGCCLETPIP---  132 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~---  132 (241)
                      .+.|...+.||+|+||.||+|.+  ++..||+|.+.......   ...+.+|+.++..++||||+++++++......   
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~   90 (311)
T 3ork_A           11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   90 (311)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred             cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence            36788899999999999999998  88999999997653222   35688999999999999999999998765543   


Q ss_pred             -eEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccC
Q 026214          133 -ILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL  211 (241)
Q Consensus       133 -~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~  211 (241)
                       ++||||+++++|.+++...     ..+++..+..++.|++.||.|||   +.+|+|+||||+|||++.++.+||+|||+
T Consensus        91 ~~lv~e~~~g~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~  162 (311)
T 3ork_A           91 PYIVMEYVDGVTLRDIVHTE-----GPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGI  162 (311)
T ss_dssp             EEEEEECCCEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEETTSCEEECCCSC
T ss_pred             cEEEEecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEcCCCCEEEeeccC
Confidence             9999999999999999764     35899999999999999999999   99999999999999999999999999999


Q ss_pred             ceecCCCCccccceeecCCceeeeecC
Q 026214          212 SISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       212 a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +..+..............++..|++||
T Consensus       163 a~~~~~~~~~~~~~~~~~gt~~y~aPE  189 (311)
T 3ork_A          163 ARAIADSGNSVTQTAAVIGTAQYLSPE  189 (311)
T ss_dssp             C------------------CCTTCCHH
T ss_pred             cccccccccccccccccCcCcccCCHH
Confidence            998766544333333334566788887

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.97  E-value=2e-31  Score=227.61  Aligned_cols=170  Identities=17%  Similarity=0.169  Sum_probs=142.6

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC-----CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN-----RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPIL  134 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  134 (241)
                      +.|...+.||+|+||.||+|.+  ++..||+|.+....     ....+.+.+|+.+++.++||||+++++++...+..++
T Consensus        24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l  103 (351)
T 3c0i_A           24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM  103 (351)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence            4588899999999999999998  78999999986421     1245678999999999999999999999999999999


Q ss_pred             EEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCc---EEEccccC
Q 026214          135 AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENV---AKMFDFSL  211 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~---~ki~DfG~  211 (241)
                      ||||+++++|.+.+..... ....+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.   +||+|||+
T Consensus       104 v~e~~~g~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~  179 (351)
T 3c0i_A          104 VFEFMDGADLCFEIVKRAD-AGFVYSEAVASHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGV  179 (351)
T ss_dssp             EEECCSSCBHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred             EEeCCCCCCHHHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChHHeEEecCCCCCcEEEecCcc
Confidence            9999999999988865421 2345899999999999999999999   999999999999999976554   99999999


Q ss_pred             ceecCCCCccccceeecCCceeeeecC
Q 026214          212 SISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       212 a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +..+........   ...++..|+|||
T Consensus       180 a~~~~~~~~~~~---~~~gt~~y~aPE  203 (351)
T 3c0i_A          180 AIQLGESGLVAG---GRVGTPHFMAPE  203 (351)
T ss_dssp             CEECCTTSCBCC---CCCSCGGGCCHH
T ss_pred             eeEecCCCeeec---CCcCCcCccCHH
Confidence            998866543221   223556788887

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.97  E-value=8.8e-32  Score=231.89  Aligned_cols=156  Identities=23%  Similarity=0.307  Sum_probs=137.9

Q ss_pred             HHHHHHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC-cchhhHHHHHHHHHhcCCCceeeEeeEEecCCc
Q 026214           55 QELKLATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR-DGHGSCINNIVYAAQMSHDHILKLIGCCLETPI  131 (241)
Q Consensus        55 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  131 (241)
                      +.+....++|...+.||+|+||.||+|.+  ++..||+|.+..... .....+.+|+.+++.++||||+++++++...+.
T Consensus       107 ~~~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~  186 (377)
T 3cbl_A          107 DKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQP  186 (377)
T ss_dssp             CTTBCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred             cccEEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCC
Confidence            34445556788889999999999999999  789999999875432 234578999999999999999999999999999


Q ss_pred             ceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccC
Q 026214          132 PILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL  211 (241)
Q Consensus       132 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~  211 (241)
                      .++||||+++|+|.+++...    ...+++..+..++.|++.||.|||   +.+++||||||+|||++.++.+||+|||+
T Consensus       187 ~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nil~~~~~~~kl~DfG~  259 (377)
T 3cbl_A          187 IYIVMELVQGGDFLTFLRTE----GARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGM  259 (377)
T ss_dssp             CEEEEECCTTCBHHHHHHHH----GGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGG
T ss_pred             cEEEEEcCCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCcCCcccCHHHEEEcCCCcEEECcCCC
Confidence            99999999999999999764    345899999999999999999999   99999999999999999999999999999


Q ss_pred             ceecCC
Q 026214          212 SISIPE  217 (241)
Q Consensus       212 a~~~~~  217 (241)
                      ++....
T Consensus       260 s~~~~~  265 (377)
T 3cbl_A          260 SREEAD  265 (377)
T ss_dssp             CEECTT
T ss_pred             ceecCC
Confidence            987544

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.97  E-value=2.9e-31  Score=229.23  Aligned_cols=173  Identities=15%  Similarity=0.110  Sum_probs=145.3

Q ss_pred             HhcCCCcCCeeecc--cceEEEEEEE--CCeEEEEEEeeccCC--cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcce
Q 026214           60 ATNNYDQKNVITED--WGCILYKGFW--QERLISVMRFRESNR--DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPI  133 (241)
Q Consensus        60 ~~~~~~~~~~lg~G--~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  133 (241)
                      ..++|...++||+|  +||.||+|.+  ++..||+|++.....  .....+.+|+.+++.++||||+++++++...+..+
T Consensus        23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~  102 (389)
T 3gni_B           23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW  102 (389)
T ss_dssp             CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence            34668889999999  9999999999  789999999976532  23466888999999999999999999999999999


Q ss_pred             EEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCce
Q 026214          134 LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSI  213 (241)
Q Consensus       134 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~  213 (241)
                      +||||+++++|.+++...   ....+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++.
T Consensus       103 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~  176 (389)
T 3gni_B          103 VVTSFMAYGSAKDLICTH---FMDGMNELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNL  176 (389)
T ss_dssp             EEEECCTTCBHHHHHHHT---CTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCGGGCE
T ss_pred             EEEEccCCCCHHHHHhhh---cccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccccce
Confidence            999999999999999775   3355999999999999999999999   9999999999999999999999999999988


Q ss_pred             ecCCCCccccc----eeecCCceeeeecC
Q 026214          214 SIPEGGTSGAK----CLKSERTEICCVRE  238 (241)
Q Consensus       214 ~~~~~~~~~~~----~~~~~~~~~~~~~e  238 (241)
                      .....+.....    .....++..|+|||
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  205 (389)
T 3gni_B          177 SMISHGQRQRVVHDFPKYSVKVLPWLSPE  205 (389)
T ss_dssp             ECEETTEECSCBCCCCTTCTTTGGGSCHH
T ss_pred             eeccccccccccccccccccccccccCHH
Confidence            76443322111    11123445678887

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.97  E-value=1.8e-31  Score=229.75  Aligned_cols=161  Identities=17%  Similarity=0.162  Sum_probs=135.8

Q ss_pred             CCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCCCCCH
Q 026214           67 KNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNL  144 (241)
Q Consensus        67 ~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL  144 (241)
                      .+.||+|+||.||+|.+  ++..||+|.+........+.+.+|+.++..++||||+++++++...+..++||||+++++|
T Consensus        94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L  173 (373)
T 2x4f_A           94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL  173 (373)
T ss_dssp             EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred             ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence            56799999999999998  7899999999876545567899999999999999999999999999999999999999999


Q ss_pred             HHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeE--cCCCcEEEccccCceecCCCCccc
Q 026214          145 RDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILF--NEENVAKMFDFSLSISIPEGGTSG  222 (241)
Q Consensus       145 ~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill--~~~~~~ki~DfG~a~~~~~~~~~~  222 (241)
                      .+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||+  +.++.+||+|||+++.+.......
T Consensus       174 ~~~l~~~----~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~  246 (373)
T 2x4f_A          174 FDRIIDE----SYNLTELDTILFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLK  246 (373)
T ss_dssp             HHHHHHT----GGGCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCC
T ss_pred             HHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccccc
Confidence            9998654    345899999999999999999999   9999999999999999  567899999999999886654332


Q ss_pred             cceeecCCceeeeecC
Q 026214          223 AKCLKSERTEICCVRE  238 (241)
Q Consensus       223 ~~~~~~~~~~~~~~~e  238 (241)
                      .    ..++..|+|||
T Consensus       247 ~----~~gt~~y~aPE  258 (373)
T 2x4f_A          247 V----NFGTPEFLAPE  258 (373)
T ss_dssp             C----CCSSCTTCCHH
T ss_pred             c----ccCCCcEeChh
Confidence            2    23556788887

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.97  E-value=2.2e-31  Score=224.77  Aligned_cols=170  Identities=19%  Similarity=0.185  Sum_probs=146.5

Q ss_pred             cCCCcCCeeecccceEEEEEEE------CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEe--cCCcce
Q 026214           62 NNYDQKNVITEDWGCILYKGFW------QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCL--ETPIPI  133 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~~  133 (241)
                      ++|...+.||+|+||.||+|.+      ++..||+|++........+.+.+|+.++..++||||+++++++.  .....+
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~  102 (327)
T 3lxl_A           23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR  102 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred             hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence            5677889999999999999984      67899999998766555677999999999999999999999887  445689


Q ss_pred             EEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCce
Q 026214          134 LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSI  213 (241)
Q Consensus       134 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~  213 (241)
                      +||||+++++|.+++...    ...+++..+..++.|++.||.|||   +.+++|+||||+|||++.++.+||+|||++.
T Consensus       103 lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~  175 (327)
T 3lxl_A          103 LVMEYLPSGCLRDFLQRH----RARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAK  175 (327)
T ss_dssp             EEEECCTTCBHHHHHHHH----GGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCGGGCE
T ss_pred             EEEeecCCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChhhEEECCCCCEEEcccccce
Confidence            999999999999999764    345899999999999999999999   9999999999999999999999999999999


Q ss_pred             ecCCCCccccceeecCCceeeeecC
Q 026214          214 SIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .+..+............+..|++||
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~y~aPE  200 (327)
T 3lxl_A          176 LLPLDKDYYVVREPGQSPIFWYAPE  200 (327)
T ss_dssp             ECCTTCSEEECSSCCCSCGGGSCHH
T ss_pred             ecccCCccceeeccCCccccccCHH
Confidence            8876654443334444555688887

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.97  E-value=2.1e-31  Score=237.30  Aligned_cols=173  Identities=18%  Similarity=0.306  Sum_probs=147.0

Q ss_pred             HHHHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceE
Q 026214           57 LKLATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPIL  134 (241)
Q Consensus        57 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  134 (241)
                      +.....+|...+.||+|+||.||+|.+  ++..||||.+.... ...+.|.+|+.++++++||||+++++++...+..++
T Consensus       215 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l  293 (495)
T 1opk_A          215 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI  293 (495)
T ss_dssp             CBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred             cccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEE
Confidence            344456677788999999999999999  58999999997654 356789999999999999999999999999999999


Q ss_pred             EEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCcee
Q 026214          135 AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSIS  214 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~  214 (241)
                      ||||+++|+|.+++...   ....+++..++.++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++.
T Consensus       294 v~E~~~~g~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~  367 (495)
T 1opk_A          294 ITEFMTYGNLLDYLREC---NRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRL  367 (495)
T ss_dssp             EEECCTTCBHHHHHHHS---CTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTCEEC
T ss_pred             EEEccCCCCHHHHHHhc---CcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChhhEEECCCCcEEEeeccccee
Confidence            99999999999999775   3456899999999999999999999   99999999999999999999999999999998


Q ss_pred             cCCCCccccceeecCCceeeeecC
Q 026214          215 IPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +..+.....  .....+..|+|||
T Consensus       368 ~~~~~~~~~--~~~~~~~~y~aPE  389 (495)
T 1opk_A          368 MTGDTYTAH--AGAKFPIKWTAPE  389 (495)
T ss_dssp             CTTCCEECC--TTCCCCGGGCCHH
T ss_pred             ccCCceeec--CCCcCCcceeCHh
Confidence            765432211  1122234578887

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.97  E-value=3.9e-31  Score=238.25  Aligned_cols=168  Identities=19%  Similarity=0.244  Sum_probs=145.9

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEE
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA  135 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  135 (241)
                      .++|...+.||+|+||.||+|.+  ++..||+|.+....   ......+.+|+.++..++||||+++++++.+.+..++|
T Consensus       183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV  262 (576)
T 2acx_A          183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV  262 (576)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence            46688889999999999999999  79999999997532   23446688999999999999999999999999999999


Q ss_pred             EeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceec
Q 026214          136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI  215 (241)
Q Consensus       136 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~  215 (241)
                      |||+++|+|.+++...   ....+++..+..++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+|+.+
T Consensus       263 mEy~~gg~L~~~l~~~---~~~~l~e~~~~~i~~qIl~aL~yLH---~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~  336 (576)
T 2acx_A          263 LTLMNGGDLKFHIYHM---GQAGFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHV  336 (576)
T ss_dssp             ECCCCSCBHHHHHHSS---SSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EEcCCCCcHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCchheEEEeCCCCeEEEecccceec
Confidence            9999999999999765   2345899999999999999999999   999999999999999999999999999999988


Q ss_pred             CCCCccccceeecCCceeeeecC
Q 026214          216 PEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ..+....    ...++..|+|||
T Consensus       337 ~~~~~~~----~~~GT~~Y~APE  355 (576)
T 2acx_A          337 PEGQTIK----GRVGTVGYMAPE  355 (576)
T ss_dssp             CTTCCEE----CCCSCGGGCCHH
T ss_pred             ccCcccc----ccCCCccccCHH
Confidence            6554322    224566788887

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.97  E-value=2.2e-31  Score=226.28  Aligned_cols=165  Identities=21%  Similarity=0.233  Sum_probs=142.4

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEE
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA  135 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  135 (241)
                      .+.|...+.||+|+||.||+|.+  ++..||+|.+....   ......+.+|+.+++.++||||+++++++...+..++|
T Consensus         8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv   87 (336)
T 3h4j_B            8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV   87 (336)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            36788899999999999999998  88999999987532   22346789999999999999999999999999999999


Q ss_pred             EeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceec
Q 026214          136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI  215 (241)
Q Consensus       136 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~  215 (241)
                      |||+ +|+|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++...
T Consensus        88 ~E~~-~g~l~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~  158 (336)
T 3h4j_B           88 IEYA-GGELFDYIVEK-----KRMTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIM  158 (336)
T ss_dssp             ECCC-CEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCSTTTEEECTTCCEEECCSSCTBTT
T ss_pred             EECC-CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCchhhEEEcCCCCEEEEEeccceec
Confidence            9999 58999998665     34899999999999999999999   999999999999999999999999999999877


Q ss_pred             CCCCccccceeecCCceeeeecC
Q 026214          216 PEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ..+.....    ..++..|+|||
T Consensus       159 ~~~~~~~~----~~gt~~y~aPE  177 (336)
T 3h4j_B          159 TDGNFLKT----SCGSPNYAAPE  177 (336)
T ss_dssp             TTSBTTCC----CTTSTTTSCGG
T ss_pred             cCCccccc----ccCCcCcCCHH
Confidence            65433222    23456788887

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.97  E-value=3.3e-31  Score=226.29  Aligned_cols=163  Identities=13%  Similarity=0.140  Sum_probs=142.5

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      ++|...+.||+|+||.||+|.+  ++..||+|.+....   ......+.+|+.++..++||||+++++++.+.+..++||
T Consensus        41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  120 (350)
T 1rdq_E           41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence            5688899999999999999999  78999999987542   234567889999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||+++|+|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++.+.
T Consensus       121 e~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~  192 (350)
T 1rdq_E          121 EYVAGGEMFSHLRRI-----GRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK  192 (350)
T ss_dssp             ECCTTCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred             cCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCccceEEECCCCCEEEcccccceecc
Confidence            999999999999765     34899999999999999999999   9999999999999999999999999999999875


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .....      ..++..|+|||
T Consensus       193 ~~~~~------~~gt~~y~aPE  208 (350)
T 1rdq_E          193 GRTWT------LCGTPEALAPE  208 (350)
T ss_dssp             SCBCC------CEECGGGCCHH
T ss_pred             CCccc------ccCCccccCHH
Confidence            44211      12345678887

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.97  E-value=6.8e-31  Score=216.48  Aligned_cols=166  Identities=17%  Similarity=0.203  Sum_probs=145.5

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      .+.|...+.||+|+||.||+|.+  ++..||+|.+..........+.+|+.+++.++||||+++++++...+..++||||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (277)
T 3f3z_A            8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL   87 (277)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence            35688899999999999999999  6789999999876656678899999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeE---cCCCcEEEccccCceec
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILF---NEENVAKMFDFSLSISI  215 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill---~~~~~~ki~DfG~a~~~  215 (241)
                      +++++|.+++...     ..+++..+..++.|++.||.|||   +.+++|+||||+||++   +.++.++|+|||++..+
T Consensus        88 ~~~~~L~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~  159 (277)
T 3f3z_A           88 CTGGELFERVVHK-----RVFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF  159 (277)
T ss_dssp             CCSCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred             cCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEecCCCCCcEEEEecccceec
Confidence            9999999998665     34899999999999999999999   9999999999999999   78899999999999987


Q ss_pred             CCCCccccceeecCCceeeeecC
Q 026214          216 PEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ..+.....    ..++..|++||
T Consensus       160 ~~~~~~~~----~~~t~~y~aPE  178 (277)
T 3f3z_A          160 KPGKMMRT----KVGTPYYVSPQ  178 (277)
T ss_dssp             CTTSCBCC----CCSCTTTCCHH
T ss_pred             cCccchhc----cCCCCCccChH
Confidence            65543222    23455678887

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.97  E-value=4.4e-31  Score=223.29  Aligned_cols=168  Identities=16%  Similarity=0.124  Sum_probs=143.3

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhc-CCCceeeEeeEEecCCcceEEEe
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQM-SHDHILKLIGCCLETPIPILAFE  137 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e  137 (241)
                      .++|...+.||+|+||.||+|.+  ++..||||.+....  ....+.+|+.++..+ +||||+++++++...+..++|||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e   85 (330)
T 2izr_A            8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE   85 (330)
T ss_dssp             TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred             cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence            36788899999999999999997  89999999987653  345689999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCc-----EEEccccCc
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENV-----AKMFDFSLS  212 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~-----~ki~DfG~a  212 (241)
                      |+ +++|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.     +||+|||+|
T Consensus        86 ~~-~~~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH---~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a  157 (330)
T 2izr_A           86 LL-GPSLEDLFDLC----DRTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA  157 (330)
T ss_dssp             CC-CCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTC
T ss_pred             eC-CCCHHHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeeccCCCCCCceEEEEEcccc
Confidence            99 89999999764    346999999999999999999999   999999999999999998887     999999999


Q ss_pred             eecCCCCcccc----ceeecCCceeeeecC
Q 026214          213 ISIPEGGTSGA----KCLKSERTEICCVRE  238 (241)
Q Consensus       213 ~~~~~~~~~~~----~~~~~~~~~~~~~~e  238 (241)
                      +.+..+.....    ......++..|++||
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  187 (330)
T 2izr_A          158 KEYIDPETKKHIPYREHKSLTGTARYMSIN  187 (330)
T ss_dssp             EESBCTTTCCBCCCCCCCCCCSCTTTCCHH
T ss_pred             eeeecCCCCccccccccCCcCCCccccChH
Confidence            98765543221    112334566788887

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.97  E-value=1.5e-31  Score=235.81  Aligned_cols=149  Identities=16%  Similarity=0.287  Sum_probs=122.7

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEecC-----Cc
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLET-----PI  131 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~  131 (241)
                      .+.|...+.||+|+||.||+|.+  ++..||||++....  ....+.+.+|+.++..++||||+++++++...     ..
T Consensus        52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  131 (458)
T 3rp9_A           52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE  131 (458)
T ss_dssp             CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence            36789999999999999999998  78999999986542  22346789999999999999999999999543     56


Q ss_pred             ceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccC
Q 026214          132 PILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL  211 (241)
Q Consensus       132 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~  211 (241)
                      .|+||||+. ++|.+++...     ..+++..+..++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+
T Consensus       132 ~~lv~e~~~-~~L~~~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH---~~~iiHrDlKp~NILl~~~~~~kl~DFGl  202 (458)
T 3rp9_A          132 LYVVLEIAD-SDFKKLFRTP-----VYLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGL  202 (458)
T ss_dssp             EEEEECCCS-EEHHHHHHSS-----CCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred             EEEEEeccc-cchhhhcccC-----CCCCHHHHHHHHHHHHHHHHHHH---hCCcCCCCCChhhEEECCCCCEeeccccc
Confidence            899999985 7999999543     45999999999999999999999   99999999999999999999999999999


Q ss_pred             ceecCCC
Q 026214          212 SISIPEG  218 (241)
Q Consensus       212 a~~~~~~  218 (241)
                      |+.+..+
T Consensus       203 a~~~~~~  209 (458)
T 3rp9_A          203 ARTVDYP  209 (458)
T ss_dssp             CBCTTSC
T ss_pred             chhccCc
Confidence            9987644

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.97  E-value=3.6e-31  Score=226.35  Aligned_cols=169  Identities=18%  Similarity=0.175  Sum_probs=143.2

Q ss_pred             HHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhc-CCCceeeEeeEEecCCcc
Q 026214           59 LATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQM-SHDHILKLIGCCLETPIP  132 (241)
Q Consensus        59 ~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~  132 (241)
                      ...++|...+.||+|+||.||+|.+  ++..||+|.+....   ......+..|..++..+ +||||+++++++.+.+..
T Consensus        17 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~   96 (353)
T 2i0e_A           17 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL   96 (353)
T ss_dssp             --CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEE
T ss_pred             CchHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEE
Confidence            3457789999999999999999999  67889999997642   23456688999999988 899999999999999999


Q ss_pred             eEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCc
Q 026214          133 ILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS  212 (241)
Q Consensus       133 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a  212 (241)
                      ++||||+++|+|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+|
T Consensus        97 ~lv~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a  168 (353)
T 2i0e_A           97 YFVMEYVNGGDLMYHIQQV-----GRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMC  168 (353)
T ss_dssp             EEEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred             EEEEeCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEEcCCCcEEEEeCCcc
Confidence            9999999999999999764     34899999999999999999999   999999999999999999999999999999


Q ss_pred             eecCCCCccccceeecCCceeeeecC
Q 026214          213 ISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +....+....   ....++..|+|||
T Consensus       169 ~~~~~~~~~~---~~~~gt~~y~aPE  191 (353)
T 2i0e_A          169 KENIWDGVTT---KTFCGTPDYIAPE  191 (353)
T ss_dssp             BCCCCTTCCB---CCCCSCGGGCCHH
T ss_pred             cccccCCccc---ccccCCccccChh
Confidence            8654333221   1223456788887

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.97  E-value=3.4e-31  Score=227.05  Aligned_cols=165  Identities=18%  Similarity=0.159  Sum_probs=136.2

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      .++|...+.||+|+||.||++.+  ++..||+|.+.... .....+.+|+.+++.++||||+++++++...+..++||||
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~   97 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY   97 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence            46788999999999999999999  88999999997654 3346788999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCc--EEEccccCceecC
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENV--AKMFDFSLSISIP  216 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~--~ki~DfG~a~~~~  216 (241)
                      +++|+|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.  +||+|||+|+...
T Consensus        98 ~~~~~L~~~l~~~-----~~~~~~~~~~i~~ql~~~L~~LH---~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~  169 (361)
T 3uc3_A           98 ASGGELYERICNA-----GRFSEDEARFFFQQLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSV  169 (361)
T ss_dssp             CCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCSCCCCGGGEEECSSSSCCEEECCCCCC----
T ss_pred             CCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCceEEEeecCcccccc
Confidence            9999999999664     34899999999999999999999   999999999999999987765  9999999998544


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ......    ...++..|+|||
T Consensus       170 ~~~~~~----~~~gt~~y~aPE  187 (361)
T 3uc3_A          170 LHSQPK----STVGTPAYIAPE  187 (361)
T ss_dssp             ---------------CTTSCHH
T ss_pred             ccCCCC----CCcCCCCcCChh
Confidence            332221    123556678887

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.97  E-value=5e-31  Score=233.57  Aligned_cols=166  Identities=22%  Similarity=0.205  Sum_probs=144.2

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEE
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA  135 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  135 (241)
                      .++|...+.||+|+||.||+|.+  ++..||||.+....   ......+.+|+.+++.++||||+++++++...+..++|
T Consensus        15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv   94 (476)
T 2y94_A           15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV   94 (476)
T ss_dssp             ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            36688899999999999999998  79999999997542   22346789999999999999999999999999999999


Q ss_pred             EeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceec
Q 026214          136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI  215 (241)
Q Consensus       136 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~  215 (241)
                      |||+++++|.+++..     ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++...
T Consensus        95 ~E~~~gg~L~~~l~~-----~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~  166 (476)
T 2y94_A           95 MEYVSGGELFDYICK-----NGRLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM  166 (476)
T ss_dssp             EECCSSEEHHHHTTS-----SSSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred             EeCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcccccHHHEEEecCCCeEEEeccchhhc
Confidence            999999999999954     345999999999999999999999   999999999999999999999999999999987


Q ss_pred             CCCCccccceeecCCceeeeecC
Q 026214          216 PEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ..+....    ...++..|.|||
T Consensus       167 ~~~~~~~----~~~gt~~y~aPE  185 (476)
T 2y94_A          167 SDGEFLR----TSCGSPNYAAPE  185 (476)
T ss_dssp             CTTCCBC----CCCSCSTTCCHH
T ss_pred             ccccccc----ccCCCcCeEChh
Confidence            6543322    223455678887

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.97  E-value=4.4e-31  Score=232.19  Aligned_cols=167  Identities=17%  Similarity=0.154  Sum_probs=142.5

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC--cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR--DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      .+.|...+.||+|+||.||+|.+  ++..+|+|.+.....  ...+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus        10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~   89 (444)
T 3soa_A           10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIF   89 (444)
T ss_dssp             HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEE
Confidence            45688899999999999999998  899999999876542  23456899999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEc---CCCcEEEccccCce
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFN---EENVAKMFDFSLSI  213 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~---~~~~~ki~DfG~a~  213 (241)
                      ||+.+|+|.+.+...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++   .++.+||+|||+|.
T Consensus        90 E~~~gg~L~~~i~~~-----~~~~e~~~~~i~~qil~aL~~lH---~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~  161 (444)
T 3soa_A           90 DLVTGGELFEDIVAR-----EYYSEADASHCIQQILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAI  161 (444)
T ss_dssp             CCCBCCBHHHHHHHC-----SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCB
T ss_pred             EeCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEeccCCCCcEEEccCceeE
Confidence            999999999999764     45899999999999999999999   99999999999999998   46789999999998


Q ss_pred             ecCCCCccccceeecCCceeeeecC
Q 026214          214 SIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .+..+.....   ...++..|+|||
T Consensus       162 ~~~~~~~~~~---~~~gt~~Y~APE  183 (444)
T 3soa_A          162 EVEGEQQAWF---GFAGTPGYLSPE  183 (444)
T ss_dssp             CCCTTCCBCC---CSCSCGGGCCHH
T ss_pred             EecCCCceee---cccCCcccCCHH
Confidence            8765543321   234566788887

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.97  E-value=7.2e-31  Score=231.25  Aligned_cols=165  Identities=20%  Similarity=0.248  Sum_probs=140.3

Q ss_pred             HhcCCCcCCeeecccceEEEEEEECCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCC-cceEEEee
Q 026214           60 ATNNYDQKNVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETP-IPILAFES  138 (241)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e~  138 (241)
                      ..++|...+.||+|+||.||+|.+.+..||||.++...  ..+.+.+|+.++++++||||+++++++.... ..++||||
T Consensus       191 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~  268 (450)
T 1k9a_A          191 NMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY  268 (450)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEEC
T ss_pred             ChHHeEEEeeecCcCCeeEEEEEecCCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEe
Confidence            44677888999999999999999999999999997654  5678999999999999999999999987665 78999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      +++|+|.+++...   ....+++..+..++.|++.||.|||   +.+++||||||+|||++.++.+||+|||+++.....
T Consensus       269 ~~~g~L~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~  342 (450)
T 1k9a_A          269 MAKGSLVDYLRSR---GRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST  342 (450)
T ss_dssp             CTTCBHHHHHHHH---CTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTSCEEECCCTTCEECC--
T ss_pred             cCCCcHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEECCCCCEEEeeCCCccccccc
Confidence            9999999999876   2345789999999999999999999   999999999999999999999999999999865433


Q ss_pred             CccccceeecCCceeeeecC
Q 026214          219 GTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ...      +..+..|+|||
T Consensus       343 ~~~------~~~~~~y~aPE  356 (450)
T 1k9a_A          343 QDT------GKLPVKWTAPE  356 (450)
T ss_dssp             ----------CCCTTTSCHH
T ss_pred             ccC------CCCCcceeCHH
Confidence            211      12334577777

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.97  E-value=4.9e-31  Score=226.20  Aligned_cols=166  Identities=19%  Similarity=0.225  Sum_probs=142.2

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC--cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR--DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      .++|...+.||+|+||.||+|.+  ++..||+|.+.....  ...+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~  107 (362)
T 2bdw_A           28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF  107 (362)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            45688999999999999999998  789999999976532  23467889999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCC---CcEEEccccCce
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEE---NVAKMFDFSLSI  213 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~---~~~ki~DfG~a~  213 (241)
                      ||+++|+|.+.+...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.+   +.+||+|||++.
T Consensus       108 e~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~  179 (362)
T 2bdw_A          108 DLVTGGELFEDIVAR-----EFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAI  179 (362)
T ss_dssp             CCCCSCBHHHHHTTC-----SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCB
T ss_pred             ecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEeecCcce
Confidence            999999999999543     45899999999999999999999   9999999999999999764   459999999998


Q ss_pred             ecCCCCccccceeecCCceeeeecC
Q 026214          214 SIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .+.......    ...++..|+|||
T Consensus       180 ~~~~~~~~~----~~~gt~~y~aPE  200 (362)
T 2bdw_A          180 EVNDSEAWH----GFAGTPGYLSPE  200 (362)
T ss_dssp             CCTTCCSCC----CSCSCTTTCCHH
T ss_pred             EecCCcccc----cCCCCccccCHH
Confidence            876543221    223455688887

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.97  E-value=3.6e-31  Score=232.01  Aligned_cols=169  Identities=18%  Similarity=0.227  Sum_probs=139.6

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEecC-----Cc
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLET-----PI  131 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~  131 (241)
                      .++|...+.||+|+||.||+|.+  ++..||||++....  ....+.+.+|+.+++.++||||+++++++...     ..
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~  104 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE  104 (432)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence            46788999999999999999998  78999999997542  22346789999999999999999999999766     56


Q ss_pred             ceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccC
Q 026214          132 PILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL  211 (241)
Q Consensus       132 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~  211 (241)
                      .++||||+. ++|.+++...     ..+++..+..++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+
T Consensus       105 ~~lv~e~~~-~~L~~~~~~~-----~~l~~~~~~~i~~qil~aL~~LH---~~givHrDlkp~NILl~~~~~~kL~DFGl  175 (432)
T 3n9x_A          105 LYIVLEIAD-SDLKKLFKTP-----IFLTEEHIKTILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGL  175 (432)
T ss_dssp             EEEEEECCS-EEHHHHHHSS-----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred             EEEEEecCC-cCHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCHHHeEECCCCCEEEccCCC
Confidence            899999997 6999999543     45899999999999999999999   99999999999999999999999999999


Q ss_pred             ceecCCCCccc-------------------cceeecCCceeeeecC
Q 026214          212 SISIPEGGTSG-------------------AKCLKSERTEICCVRE  238 (241)
Q Consensus       212 a~~~~~~~~~~-------------------~~~~~~~~~~~~~~~e  238 (241)
                      |+.+.......                   .......++.+|+|||
T Consensus       176 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE  221 (432)
T 3n9x_A          176 ARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPE  221 (432)
T ss_dssp             CEEC-------------------------------CCCCCTTCCHH
T ss_pred             cccccccccccccccccccccccccccchhccccCCCCCccccCHH
Confidence            99886543221                   1123444577899998

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.97  E-value=1.4e-31  Score=224.76  Aligned_cols=165  Identities=19%  Similarity=0.153  Sum_probs=136.4

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC--cchhhHHHHHHHHHhc-CCCceeeEeeEEecCCcceEEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR--DGHGSCINNIVYAAQM-SHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      ++|...++||+|+||+||+|.+  ++..||||++.....  .....+..|+..+..+ +||||+++++++...+..++||
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~  136 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT  136 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence            5688899999999999999999  789999999865432  2234456666666666 9999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||+ +++|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++....
T Consensus       137 e~~-~~~L~~~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~  208 (311)
T 3p1a_A          137 ELC-GPSLQQHCEAW----GASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELG  208 (311)
T ss_dssp             ECC-CCBHHHHHHHH----CSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECGGGCEEECCCTTCEECC
T ss_pred             ecc-CCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEccceeeeecc
Confidence            999 57999998775    346999999999999999999999   8999999999999999999999999999998876


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ......    ...++..|+|||
T Consensus       209 ~~~~~~----~~~gt~~y~aPE  226 (311)
T 3p1a_A          209 TAGAGE----VQEGDPRYMAPE  226 (311)
T ss_dssp             ----------CCCCCGGGCCGG
T ss_pred             cCCCCc----ccCCCccccCHh
Confidence            543322    223556788888

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.97  E-value=1.7e-31  Score=227.92  Aligned_cols=184  Identities=17%  Similarity=0.258  Sum_probs=149.7

Q ss_pred             ccCHHHHHHHhcCCCcCCeeecccceEEEEEEE-------CCeEEEEEEeeccCC-cchhhHHHHHHHHHhc-CCCceee
Q 026214           51 IFSAQELKLATNNYDQKNVITEDWGCILYKGFW-------QERLISVMRFRESNR-DGHGSCINNIVYAAQM-SHDHILK  121 (241)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~  121 (241)
                      .++..++....++|...+.||+|+||.||+|.+       ++..||||++..... ...+.+.+|+.++..+ +||||++
T Consensus        11 ~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~   90 (359)
T 3vhe_A           11 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN   90 (359)
T ss_dssp             CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             CCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceee
Confidence            466778888889999999999999999999984       558899999976432 2346789999999999 8999999


Q ss_pred             EeeEEecCC-cceEEEeeCCCCCHHHHHhhcCCC----------------------------------------------
Q 026214          122 LIGCCLETP-IPILAFESVEYGNLRDRILSASQP----------------------------------------------  154 (241)
Q Consensus       122 l~~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~----------------------------------------------  154 (241)
                      +++++...+ ..+++|||+++|+|.+++......                                              
T Consensus        91 ~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (359)
T 3vhe_A           91 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEE  170 (359)
T ss_dssp             EEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------
T ss_pred             eeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccc
Confidence            999998765 489999999999999999765210                                              


Q ss_pred             ---------------CCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCC
Q 026214          155 ---------------QTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGG  219 (241)
Q Consensus       155 ---------------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~  219 (241)
                                     ....+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++..+..+.
T Consensus       171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~  247 (359)
T 3vhe_A          171 KSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP  247 (359)
T ss_dssp             -------------CTTTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCT
T ss_pred             cccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCcEEEEeccceeeecccc
Confidence                           0223889999999999999999999   9999999999999999999999999999999775543


Q ss_pred             ccccceeecCCceeeeecC
Q 026214          220 TSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~e  238 (241)
                      .... .....++..|+|||
T Consensus       248 ~~~~-~~~~~~t~~y~aPE  265 (359)
T 3vhe_A          248 DYVR-KGDARLPLKWMAPE  265 (359)
T ss_dssp             TCEE-C--CEECGGGCCHH
T ss_pred             cchh-ccccCCCceeEChh
Confidence            3211 11222344588887

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.97  E-value=9.2e-31  Score=220.31  Aligned_cols=171  Identities=17%  Similarity=0.233  Sum_probs=130.9

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC-cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEe
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR-DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFE  137 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  137 (241)
                      .+.|...+.||+|+||.||+|.+  ++..||+|.+..... .....+.+|+.+++.++||||+++++++..++..++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   83 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE   83 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence            35688899999999999999998  789999999876532 334678999999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          138 SVEYGNLRDRILSASQ-PQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~-~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      |++ ++|.+++..... .....+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++..+.
T Consensus        84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~  159 (317)
T 2pmi_A           84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFG  159 (317)
T ss_dssp             CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred             ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence            998 699999875421 12345899999999999999999999   9999999999999999999999999999999876


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .+.....   ...++..|+|||
T Consensus       160 ~~~~~~~---~~~~t~~y~aPE  178 (317)
T 2pmi_A          160 IPVNTFS---SEVVTLWYRAPD  178 (317)
T ss_dssp             SCCCCCC---CCCSCCTTCCHH
T ss_pred             CCcccCC---CCcccccccCch
Confidence            5432221   223456678887

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.97  E-value=1.4e-31  Score=235.50  Aligned_cols=167  Identities=16%  Similarity=0.148  Sum_probs=133.6

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeecc---CCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEE
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRES---NRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA  135 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  135 (241)
                      .++|...+.||+|+||.||+|.+  ++..||+|.+...   .......+.+|+.+++.++||||+++++++...+..++|
T Consensus       147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv  226 (446)
T 4ejn_A          147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV  226 (446)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred             hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence            46688899999999999999998  8899999999753   223446678999999999999999999999999999999


Q ss_pred             EeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCC-CCeEEccCCCCCeeEcCCCcEEEccccCcee
Q 026214          136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFP-RPIVYRDFKTAHILFNEENVAKMFDFSLSIS  214 (241)
Q Consensus       136 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~-~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~  214 (241)
                      |||+++|+|.+++...     ..+++..+..++.|++.||.|||   + .+|+||||||+|||++.++.+||+|||+|+.
T Consensus       227 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~  298 (446)
T 4ejn_A          227 MEYANGGELFFHLSRE-----RVFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKE  298 (446)
T ss_dssp             ECCCSSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCCCGGGEEECSSSCEEECCCCCCCT
T ss_pred             EeeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHh---hcCCEEECCCCHHHEEECCCCCEEEccCCCcee
Confidence            9999999999999665     35899999999999999999999   7 8999999999999999999999999999986


Q ss_pred             cCCCCccccceeecCCceeeeecC
Q 026214          215 IPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ...+.....   ...++..|+|||
T Consensus       299 ~~~~~~~~~---~~~gt~~y~aPE  319 (446)
T 4ejn_A          299 GIKDGATMK---TFCGTPEYLAPE  319 (446)
T ss_dssp             TCC-----C---CSSSCGGGCCHH
T ss_pred             ccCCCcccc---cccCCccccCHh
Confidence            544432221   233566788887

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.97  E-value=8e-31  Score=221.33  Aligned_cols=170  Identities=21%  Similarity=0.260  Sum_probs=144.6

Q ss_pred             cCCCcCCeeecccceEEEEEEE------CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCC--cce
Q 026214           62 NNYDQKNVITEDWGCILYKGFW------QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETP--IPI  133 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~  133 (241)
                      +.|...+.||+|+||.||+|.+      ++..||+|.+........+.+.+|+.+++.++||||+++++++...+  ..+
T Consensus        41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  120 (326)
T 2w1i_A           41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK  120 (326)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred             HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence            4577889999999999999984      68899999998766556678999999999999999999999987654  789


Q ss_pred             EEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCce
Q 026214          134 LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSI  213 (241)
Q Consensus       134 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~  213 (241)
                      +||||+++++|.+++...    ...+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.+||+|||++.
T Consensus       121 lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~  193 (326)
T 2w1i_A          121 LIMEYLPYGSLRDYLQKH----KERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTK  193 (326)
T ss_dssp             EEECCCTTCBHHHHHHHS----TTSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred             EEEECCCCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEEcCCCcEEEecCcchh
Confidence            999999999999999765    345899999999999999999999   9999999999999999999999999999999


Q ss_pred             ecCCCCccccceeecCCceeeeecC
Q 026214          214 SIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .+..+............+..|++||
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~y~aPE  218 (326)
T 2w1i_A          194 VLPQDKEYYKVKEPGESPIFWYAPE  218 (326)
T ss_dssp             ECCSSCSEEECSSCCSCCGGGCCHH
T ss_pred             hccccccccccccCCCCceeEECch
Confidence            8876654333223334445678887

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.97  E-value=1.1e-31  Score=236.80  Aligned_cols=176  Identities=15%  Similarity=0.198  Sum_probs=146.5

Q ss_pred             CHHHHHHHhcCCCcCCeeecccceEEEEEEE-CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCc
Q 026214           53 SAQELKLATNNYDQKNVITEDWGCILYKGFW-QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPI  131 (241)
Q Consensus        53 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  131 (241)
                      ...++....++|...+.||+|+||.||+|.+ ++..||||.+.... ...+.+.+|+.+++.++||||+++++++. .+.
T Consensus       179 ~~~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~  256 (454)
T 1qcf_A          179 EKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEP  256 (454)
T ss_dssp             CTTCSBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSS
T ss_pred             cccceeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCc
Confidence            3455566677888899999999999999999 68899999998654 45678999999999999999999999986 567


Q ss_pred             ceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccC
Q 026214          132 PILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL  211 (241)
Q Consensus       132 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~  211 (241)
                      .++||||+++|+|.+++...   ....+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+
T Consensus       257 ~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DFG~  330 (454)
T 1qcf_A          257 IYIITEFMAKGSLLDFLKSD---EGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGL  330 (454)
T ss_dssp             CEEEECCCTTCBHHHHHHSH---HHHTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTCCEEECSTTG
T ss_pred             cEEEEeecCCCcHHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEECCCCcEEEeeCCC
Confidence            89999999999999999654   1235888999999999999999999   99999999999999999999999999999


Q ss_pred             ceecCCCCccccceeecCCceeeeecC
Q 026214          212 SISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       212 a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ++.+..+....  ......+..|+|||
T Consensus       331 a~~~~~~~~~~--~~~~~~~~~y~aPE  355 (454)
T 1qcf_A          331 ARVIEDNEYTA--REGAKFPIKWTAPE  355 (454)
T ss_dssp             GGGBCCHHHHT--TCSSSSCGGGSCHH
T ss_pred             ceEcCCCceec--cCCCcccccccCHH
Confidence            98775432111  11222334577887

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.97  E-value=3.4e-31  Score=219.84  Aligned_cols=166  Identities=19%  Similarity=0.236  Sum_probs=138.8

Q ss_pred             cCCCcCCeeecccceEEEEEEE-CCeEEEEEEeeccCC--cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           62 NNYDQKNVITEDWGCILYKGFW-QERLISVMRFRESNR--DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      ++|...+.||+|+||.||+|.+ ++..||+|++.....  .....+.+|+.+++.++||||+++++++...+..++||||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence            4678889999999999999999 789999999865432  2346788999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      ++ ++|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++..+..+
T Consensus        82 ~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  153 (288)
T 1ob3_A           82 LD-QDLKKLLDVC----EGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP  153 (288)
T ss_dssp             CS-EEHHHHHHTS----TTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-
T ss_pred             cC-CCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEeECccccccCcc
Confidence            98 5999998664    356899999999999999999999   999999999999999999999999999999877544


Q ss_pred             CccccceeecCCceeeeecC
Q 026214          219 GTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .....   ...++..|+|||
T Consensus       154 ~~~~~---~~~~t~~y~aPE  170 (288)
T 1ob3_A          154 VRKYT---HEIVTLWYRAPD  170 (288)
T ss_dssp             -----------CCCTTCCHH
T ss_pred             ccccc---cccccccccCch
Confidence            32221   123355678887

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.97  E-value=3.2e-31  Score=219.08  Aligned_cols=170  Identities=17%  Similarity=0.277  Sum_probs=141.7

Q ss_pred             HHhcCCCcCCeeecccceEEEEEEE-CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEe
Q 026214           59 LATNNYDQKNVITEDWGCILYKGFW-QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFE  137 (241)
Q Consensus        59 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  137 (241)
                      ...++|...+.||+|+||.||++.+ ++..||+|.+.... ...+.+.+|+.++..++||||+++++++...+..++|||
T Consensus        21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   99 (283)
T 3gen_A           21 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE   99 (283)
T ss_dssp             CCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEC
T ss_pred             CCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEe
Confidence            3456788889999999999999999 77889999998654 345779999999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCC
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE  217 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~  217 (241)
                      |+++++|.+++...    ...+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.++|+|||++.....
T Consensus       100 ~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~  172 (283)
T 3gen_A          100 YMANGCLLNYLREM----RHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD  172 (283)
T ss_dssp             CCTTCBHHHHHHCG----GGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCC
T ss_pred             ccCCCcHHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCccceEEEcCCCCEEEccccccccccc
Confidence            99999999999664    345899999999999999999999   99999999999999999999999999999987654


Q ss_pred             CCccccceeecCCceeeeecC
Q 026214          218 GGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +....  ......+..|++||
T Consensus       173 ~~~~~--~~~~~~~~~y~aPE  191 (283)
T 3gen_A          173 DEYTS--SVGSKFPVRWSPPE  191 (283)
T ss_dssp             HHHHS--TTSTTSCGGGCCHH
T ss_pred             ccccc--ccCCccCcccCCHH
Confidence            32211  12222344577777

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.97  E-value=1.1e-30  Score=217.34  Aligned_cols=169  Identities=20%  Similarity=0.238  Sum_probs=138.6

Q ss_pred             hcCCCcCCeeecccceEEEEEEECCeEEEEEEeeccCCcchhhHHHHHHHHHh--cCCCceeeEeeEEecC----CcceE
Q 026214           61 TNNYDQKNVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQ--MSHDHILKLIGCCLET----PIPIL  134 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~----~~~~l  134 (241)
                      .++|...+.||+|+||.||+|.+++..||||++...   ....+.+|.+++..  ++||||+++++++...    ...++
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~l   83 (301)
T 3q4u_A            7 ARDITLLECVGKGRYGEVWRGSWQGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWL   83 (301)
T ss_dssp             GGGCEEEEEEEECSSEEEEEEEETTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred             cCcEEEEEeeccCCCcEEEEEEECCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEE
Confidence            467888999999999999999999999999998654   34556677777766  7999999999987543    45899


Q ss_pred             EEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCC-----CCCeEEccCCCCCeeEcCCCcEEEccc
Q 026214          135 AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGF-----PRPIVYRDFKTAHILFNEENVAKMFDF  209 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~-----~~~ivH~dlk~~Nill~~~~~~ki~Df  209 (241)
                      ||||+++|+|.+++.      ...+++..+..++.|++.||.|||...     +.+|+||||||+|||++.++.+||+||
T Consensus        84 v~e~~~~g~L~~~l~------~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df  157 (301)
T 3q4u_A           84 ITHYHEMGSLYDYLQ------LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADL  157 (301)
T ss_dssp             EECCCTTCBHHHHHT------TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCC
T ss_pred             ehhhccCCCHHHHHh------hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeC
Confidence            999999999999993      345899999999999999999999321     568999999999999999999999999


Q ss_pred             cCceecCCCCccccc-eeecCCceeeeecC
Q 026214          210 SLSISIPEGGTSGAK-CLKSERTEICCVRE  238 (241)
Q Consensus       210 G~a~~~~~~~~~~~~-~~~~~~~~~~~~~e  238 (241)
                      |+|+........... .....++..|+|||
T Consensus       158 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE  187 (301)
T 3q4u_A          158 GLAVMHSQSTNQLDVGNNPRVGTKRYMAPE  187 (301)
T ss_dssp             TTCEEEETTTTEEECCCCCCCCCGGGCCHH
T ss_pred             CCeeecccccccccccccccccccceeChh
Confidence            999887655433221 12224566788888

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.97  E-value=5.8e-31  Score=222.59  Aligned_cols=167  Identities=17%  Similarity=0.178  Sum_probs=132.2

Q ss_pred             hcCCCcCCeeecccceEEEEEEE-----CCeEEEEEEeeccC----CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCc
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW-----QERLISVMRFRESN----RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPI  131 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  131 (241)
                      .++|...+.||+|+||.||++.+     ++..||+|.+....    ......+.+|+.++..++||||+++++++...+.
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   95 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK   95 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred             HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence            35688899999999999999987     67899999987642    2234567889999999999999999999999999


Q ss_pred             ceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccC
Q 026214          132 PILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL  211 (241)
Q Consensus       132 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~  211 (241)
                      .++||||+++++|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+
T Consensus        96 ~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~  167 (327)
T 3a62_A           96 LYLILEYLSGGELFMQLERE-----GIFMEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGL  167 (327)
T ss_dssp             EEEEEECCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTSCEEECCCSC
T ss_pred             EEEEEeCCCCCcHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHH---hCCEEcccCCHHHeEECCCCcEEEEeCCc
Confidence            99999999999999999664     34889999999999999999999   99999999999999999999999999999


Q ss_pred             ceecCCCCccccceeecCCceeeeecC
Q 026214          212 SISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       212 a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ++....+.....   ...++..|+|||
T Consensus       168 ~~~~~~~~~~~~---~~~gt~~y~aPE  191 (327)
T 3a62_A          168 CKESIHDGTVTH---TFCGTIEYMAPE  191 (327)
T ss_dssp             C----------C---TTSSCCTTSCHH
T ss_pred             ccccccCCcccc---ccCCCcCccCHh
Confidence            986544332211   123455678887

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.97  E-value=1.1e-31  Score=222.36  Aligned_cols=173  Identities=19%  Similarity=0.306  Sum_probs=147.4

Q ss_pred             HHHHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceE
Q 026214           57 LKLATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPIL  134 (241)
Q Consensus        57 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  134 (241)
                      +....++|...+.||+|+||.||+|.+  ++..||+|.+.... ...+.+.+|+.+++.++||||+++++++...+..++
T Consensus         8 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   86 (288)
T 3kfa_A            8 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI   86 (288)
T ss_dssp             TBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEE
T ss_pred             ccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEE
Confidence            344567788899999999999999999  68999999997654 355779999999999999999999999999999999


Q ss_pred             EEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCcee
Q 026214          135 AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSIS  214 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~  214 (241)
                      ||||+++++|.+++...   ....+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.++|+|||++..
T Consensus        87 v~e~~~~~~L~~~~~~~---~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~  160 (288)
T 3kfa_A           87 ITEFMTYGNLLDYLREC---NRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL  160 (288)
T ss_dssp             EEECCTTEEHHHHHHHC---CTTTSCHHHHHHHHHHHHHHHHHHH---HHTCCCSCCSGGGEEECGGGCEEECCCCGGGT
T ss_pred             EEEcCCCCcHHHHHHhc---ccCCccHhHHHHHHHHHHHHHHHHH---HCCccCCCCCcceEEEcCCCCEEEccCcccee
Confidence            99999999999999775   3456899999999999999999999   99999999999999999999999999999988


Q ss_pred             cCCCCccccceeecCCceeeeecC
Q 026214          215 IPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ...+........  ..+..|++||
T Consensus       161 ~~~~~~~~~~~~--~~~~~y~aPE  182 (288)
T 3kfa_A          161 MTGDTYTAHAGA--KFPIKWTAPE  182 (288)
T ss_dssp             SCSSSSEEETTE--EECGGGCCHH
T ss_pred             ccCCccccccCC--ccccCcCChh
Confidence            765543222111  1233577777

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.97  E-value=3.1e-30  Score=218.04  Aligned_cols=158  Identities=20%  Similarity=0.203  Sum_probs=126.3

Q ss_pred             CCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcC-CCceeeEeeEEecCCcceEEEeeCCCCC
Q 026214           67 KNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMS-HDHILKLIGCCLETPIPILAFESVEYGN  143 (241)
Q Consensus        67 ~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~gs  143 (241)
                      .+.||+|+||.||+|.+  ++..||+|.+...   ....+.+|+.++..+. ||||+++++++.+....++||||+++++
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~   92 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE   92 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred             CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence            57899999999999999  7899999998754   3456789999999996 9999999999999999999999999999


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCC---cEEEccccCceecCCCCc
Q 026214          144 LRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEEN---VAKMFDFSLSISIPEGGT  220 (241)
Q Consensus       144 L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~---~~ki~DfG~a~~~~~~~~  220 (241)
                      |.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++   .+||+|||+++....+..
T Consensus        93 L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~  164 (325)
T 3kn6_A           93 LFERIKKK-----KHFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ  164 (325)
T ss_dssp             HHHHHHHC-----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC---
T ss_pred             HHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC
Confidence            99999664     45899999999999999999999   99999999999999997665   899999999998765543


Q ss_pred             cccceeecCCceeeeecC
Q 026214          221 SGAKCLKSERTEICCVRE  238 (241)
Q Consensus       221 ~~~~~~~~~~~~~~~~~e  238 (241)
                      ...   ...++..|+|||
T Consensus       165 ~~~---~~~~t~~y~aPE  179 (325)
T 3kn6_A          165 PLK---TPCFTLHYAAPE  179 (325)
T ss_dssp             ------------------
T ss_pred             ccc---ccCCCcCccCHH
Confidence            322   223466788888

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.97  E-value=3.1e-31  Score=219.67  Aligned_cols=150  Identities=18%  Similarity=0.264  Sum_probs=134.4

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CC-------eEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcc
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QE-------RLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIP  132 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  132 (241)
                      ++|...+.||+|+||.||+|.+  ++       ..||+|.+........+.+.+|+.++..++||||+++++++..++..
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   87 (289)
T 4fvq_A            8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN   87 (289)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred             hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence            5677889999999999999998  33       57999999876656677899999999999999999999999999999


Q ss_pred             eEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCc--------E
Q 026214          133 ILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENV--------A  204 (241)
Q Consensus       133 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~--------~  204 (241)
                      ++||||+++++|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.        +
T Consensus        88 ~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~  160 (289)
T 4fvq_A           88 ILVQEFVKFGSLDTYLKKN----KNCINILWKLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFI  160 (289)
T ss_dssp             EEEEECCTTCBHHHHHHHT----GGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEEECCBGGGTBCCEE
T ss_pred             EEEEECCCCCCHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHh---hCCeECCCcCcceEEEecCCccccccccee
Confidence            9999999999999999765    345899999999999999999999   999999999999999988877        9


Q ss_pred             EEccccCceecCCC
Q 026214          205 KMFDFSLSISIPEG  218 (241)
Q Consensus       205 ki~DfG~a~~~~~~  218 (241)
                      ||+|||++......
T Consensus       161 kl~Dfg~~~~~~~~  174 (289)
T 4fvq_A          161 KLSDPGISITVLPK  174 (289)
T ss_dssp             EECCCCSCTTTSCH
T ss_pred             eeccCcccccccCc
Confidence            99999999766443

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.97  E-value=1.4e-30  Score=233.69  Aligned_cols=170  Identities=16%  Similarity=0.225  Sum_probs=145.8

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      +.|...+.||+|+||.||+|.+  ++..||+|++....   ......+.+|+.++..++||||+++++++...+..++||
T Consensus       185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm  264 (543)
T 3c4z_A          185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM  264 (543)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence            5677788999999999999998  78999999997542   234567889999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||+++|+|.+++..... ....+++..+..++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++.+.
T Consensus       265 E~~~gg~L~~~l~~~~~-~~~~l~e~~~~~~~~qi~~aL~~LH---~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~  340 (543)
T 3c4z_A          265 TIMNGGDIRYHIYNVDE-DNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK  340 (543)
T ss_dssp             CCCTTCBHHHHHHTSST-TSCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred             EeccCCCHHHHHHHhhc-ccccccHHHHHHHHHHHHHHHHHHH---HcCCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence            99999999999976522 2456999999999999999999999   9999999999999999999999999999999876


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .+.....   ...++..|+|||
T Consensus       341 ~~~~~~~---~~~GT~~Y~APE  359 (543)
T 3c4z_A          341 AGQTKTK---GYAGTPGFMAPE  359 (543)
T ss_dssp             TTCCCBC---CCCSCTTTSCHH
T ss_pred             CCCcccc---cccCCccccChh
Confidence            6543221   123456788887

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.97  E-value=4.4e-32  Score=230.00  Aligned_cols=162  Identities=12%  Similarity=0.100  Sum_probs=131.8

Q ss_pred             hcCCCcCCeeecccceEEEEEEECCeEEEEEEeeccCC--------cchhhHHHHHHHHHhcC---------CCceeeEe
Q 026214           61 TNNYDQKNVITEDWGCILYKGFWQERLISVMRFRESNR--------DGHGSCINNIVYAAQMS---------HDHILKLI  123 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~---------h~niv~l~  123 (241)
                      .++|...+.||+|+||.||+|.+++..||||++.....        ...+.+.+|+.+++.++         ||||+++.
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~   98 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN   98 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEETTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred             cccchheeeecccCceEEEEEEeCCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence            35577889999999999999999999999999986532        22367899999999886         66776666


Q ss_pred             eEE-----------------ec-------------CCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHH
Q 026214          124 GCC-----------------LE-------------TPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAH  173 (241)
Q Consensus       124 ~~~-----------------~~-------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~  173 (241)
                      +++                 .+             .+..++||||+++|++.+.+.      ...+++..+..++.|++.
T Consensus        99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~------~~~~~~~~~~~i~~qi~~  172 (336)
T 2vuw_A           99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMR------TKLSSLATAKSILHQLTA  172 (336)
T ss_dssp             EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGT------TTCCCHHHHHHHHHHHHH
T ss_pred             ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHH------hcCCCHHHHHHHHHHHHH
Confidence            653                 22             678999999999997766662      245899999999999999


Q ss_pred             HHHHHhCCCCCCeEEccCCCCCeeEcCCC--------------------cEEEccccCceecCCCCccccceeecCCcee
Q 026214          174 ALAYLHFGFPRPIVYRDFKTAHILFNEEN--------------------VAKMFDFSLSISIPEGGTSGAKCLKSERTEI  233 (241)
Q Consensus       174 ~l~~lH~~~~~~ivH~dlk~~Nill~~~~--------------------~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~  233 (241)
                      ||.|||.  +.+|+||||||+|||++.++                    .+||+|||+|+.+....        ..++..
T Consensus       173 aL~~lH~--~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~~--------~~gt~~  242 (336)
T 2vuw_A          173 SLAVAEA--SLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGI--------VVFCDV  242 (336)
T ss_dssp             HHHHHHH--HHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETTE--------EECCCC
T ss_pred             HHHHHHH--hCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCCc--------EEEeec
Confidence            9999992  36899999999999999887                    89999999999876431        134566


Q ss_pred             eeecC
Q 026214          234 CCVRE  238 (241)
Q Consensus       234 ~~~~e  238 (241)
                      |+|||
T Consensus       243 y~aPE  247 (336)
T 2vuw_A          243 SMDED  247 (336)
T ss_dssp             TTCSG
T ss_pred             ccChh
Confidence            88888

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.97  E-value=1.9e-30  Score=217.74  Aligned_cols=169  Identities=21%  Similarity=0.245  Sum_probs=137.6

Q ss_pred             cCCCc-CCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhc-CCCceeeEeeEEecCCcceEEEe
Q 026214           62 NNYDQ-KNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQM-SHDHILKLIGCCLETPIPILAFE  137 (241)
Q Consensus        62 ~~~~~-~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e  137 (241)
                      +.|.. .+.||+|+||.||+|.+  ++..||||.+..........+.+|+.++.++ +||||+++++++...+..++|||
T Consensus        12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e   91 (316)
T 2ac3_A           12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE   91 (316)
T ss_dssp             TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence            44655 47899999999999998  7899999999876655667899999999985 79999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCc---EEEccccCcee
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENV---AKMFDFSLSIS  214 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~---~ki~DfG~a~~  214 (241)
                      |+++++|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.   +||+|||++..
T Consensus        92 ~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~  163 (316)
T 2ac3_A           92 KMRGGSILSHIHKR-----RHFNELEASVVVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSG  163 (316)
T ss_dssp             CCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-
T ss_pred             cCCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEEccCCCcCceEEEEccCccc
Confidence            99999999999765     35899999999999999999999   999999999999999988765   99999999987


Q ss_pred             cCCCCcc----ccceeecCCceeeeecC
Q 026214          215 IPEGGTS----GAKCLKSERTEICCVRE  238 (241)
Q Consensus       215 ~~~~~~~----~~~~~~~~~~~~~~~~e  238 (241)
                      +......    ........++..|+|||
T Consensus       164 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE  191 (316)
T 2ac3_A          164 IKLNGDCSPISTPELLTPCGSAEYMAPE  191 (316)
T ss_dssp             ------------------CCSGGGCCHH
T ss_pred             cccCCccccccccccccccCCcCccChH
Confidence            7543221    11112233566788887

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=1.5e-30  Score=215.73  Aligned_cols=169  Identities=15%  Similarity=0.236  Sum_probs=142.8

Q ss_pred             cCCCcCC-eeecccceEEEEEEE----CCeEEEEEEeeccCC-cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEE
Q 026214           62 NNYDQKN-VITEDWGCILYKGFW----QERLISVMRFRESNR-DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA  135 (241)
Q Consensus        62 ~~~~~~~-~lg~G~~g~Vy~~~~----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  135 (241)
                      ++|.... .||+|+||.||+|.+    ++..||+|.+..... ...+.+.+|+.++..++||||+++++++ ..+..++|
T Consensus         9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv   87 (287)
T 1u59_A            9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV   87 (287)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred             HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence            3454444 899999999999986    578899999986532 3456789999999999999999999999 45678999


Q ss_pred             EeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceec
Q 026214          136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI  215 (241)
Q Consensus       136 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~  215 (241)
                      |||+++++|.+++...    ...+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.++|+|||++..+
T Consensus        88 ~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~  160 (287)
T 1u59_A           88 MEMAGGGPLHKFLVGK----REEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKAL  160 (287)
T ss_dssp             EECCTTEEHHHHHTTC----TTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred             EEeCCCCCHHHHHHhC----CccCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCchheEEEcCCCCEEECcccceeee
Confidence            9999999999999654    456899999999999999999999   999999999999999999999999999999988


Q ss_pred             CCCCccccceeecCCceeeeecC
Q 026214          216 PEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ..+............+..|++||
T Consensus       161 ~~~~~~~~~~~~~~~~~~y~aPE  183 (287)
T 1u59_A          161 GADDSYYTARSAGKWPLKWYAPE  183 (287)
T ss_dssp             TTCSCEECCCCSSCCCGGGCCHH
T ss_pred             ccCcceeeccccccccccccCHH
Confidence            76655444444444566788887

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=8.6e-31  Score=222.03  Aligned_cols=170  Identities=19%  Similarity=0.210  Sum_probs=133.7

Q ss_pred             cCCCcCCeeecccceEEEEEEE--C----CeEEEEEEeeccCC-cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--Q----ERLISVMRFRESNR-DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPIL  134 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  134 (241)
                      ..|...+.||+|+||.||+|.+  +    +..||+|.+..... .....+.+|+.++..++||||+++++++...+..++
T Consensus        44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  123 (333)
T 1mqb_A           44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI  123 (333)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence            4456678999999999999987  2    24599999876432 234568999999999999999999999999999999


Q ss_pred             EEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCcee
Q 026214          135 AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSIS  214 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~  214 (241)
                      ||||+++++|.+++...    ...+++..+..++.|++.||.|||   +.+|+|+||||+||+++.++.+||+|||++..
T Consensus       124 v~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~  196 (333)
T 1mqb_A          124 ITEYMENGALDKFLREK----DGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRV  196 (333)
T ss_dssp             EEECCTTEEHHHHHHHT----TTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred             EEeCCCCCcHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChheEEECCCCcEEECCCCcchh
Confidence            99999999999999764    356899999999999999999999   99999999999999999999999999999998


Q ss_pred             cCCCCccccceeecCCceeeeecC
Q 026214          215 IPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +..+.........+..+..|++||
T Consensus       197 ~~~~~~~~~~~~~~~~~~~y~aPE  220 (333)
T 1mqb_A          197 LEDDPEATYTTSGGKIPIRWTAPE  220 (333)
T ss_dssp             --------------CCCGGGSCHH
T ss_pred             hccccccccccCCCCccccccCch
Confidence            766543333333344455678887

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.97  E-value=2.5e-30  Score=217.63  Aligned_cols=166  Identities=21%  Similarity=0.337  Sum_probs=140.9

Q ss_pred             CCcCCeeecccceEEEEEEE------CCeEEEEEEeeccCC-cchhhHHHHHHHHHhcCCCceeeEeeEEecC--CcceE
Q 026214           64 YDQKNVITEDWGCILYKGFW------QERLISVMRFRESNR-DGHGSCINNIVYAAQMSHDHILKLIGCCLET--PIPIL  134 (241)
Q Consensus        64 ~~~~~~lg~G~~g~Vy~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l  134 (241)
                      |...+.||+|+||.||++.+      ++..||+|++..... .....+.+|+.+++.++||||+++++++.+.  ...++
T Consensus        33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l  112 (318)
T 3lxp_A           33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL  112 (318)
T ss_dssp             EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred             HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence            47789999999999998865      678999999986532 2346789999999999999999999999874  56899


Q ss_pred             EEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCcee
Q 026214          135 AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSIS  214 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~  214 (241)
                      ||||+++++|.+++...      .+++..+..++.|++.||.|||   +.+|+|+||||+||+++.++.+||+|||++..
T Consensus       113 v~e~~~~~~L~~~l~~~------~~~~~~~~~i~~~l~~~l~~LH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~  183 (318)
T 3lxp_A          113 VMEYVPLGSLRDYLPRH------SIGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKA  183 (318)
T ss_dssp             EECCCTTCBHHHHGGGS------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred             EEecccCCcHHHHHhhC------CCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEEcCCCCEEECCcccccc
Confidence            99999999999999543      3899999999999999999999   99999999999999999999999999999998


Q ss_pred             cCCCCccccceeecCCceeeeecC
Q 026214          215 IPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +...............+..|++||
T Consensus       184 ~~~~~~~~~~~~~~~~~~~y~aPE  207 (318)
T 3lxp_A          184 VPEGHEYYRVREDGDSPVFWYAPE  207 (318)
T ss_dssp             CCTTCSEEEC---CCCCGGGCCHH
T ss_pred             ccccccccccccCCCCCceeeChH
Confidence            877654444344445555688887

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.97  E-value=1.5e-30  Score=214.74  Aligned_cols=167  Identities=15%  Similarity=0.192  Sum_probs=141.6

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC--CcchhhHHHHHHHHHhc-CCCceeeEeeEEecCCcceEE
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN--RDGHGSCINNIVYAAQM-SHDHILKLIGCCLETPIPILA  135 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv  135 (241)
                      .++|...+.||+|+||.||+|.+  ++..||+|.+....  ......+.+|+..+..+ +||||+++++++.+.+..++|
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv   89 (289)
T 1x8b_A           10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ   89 (289)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred             cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence            35688899999999999999999  79999999988643  23456788999999999 999999999999999999999


Q ss_pred             EeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcC---------------
Q 026214          136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNE---------------  200 (241)
Q Consensus       136 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~---------------  200 (241)
                      |||+++++|.+++..... ....+++..+..++.|++.||.|||   +.+|+|+||||+|||++.               
T Consensus        90 ~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~  165 (289)
T 1x8b_A           90 NEYCNGGSLADAISENYR-IMSYFKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDD  165 (289)
T ss_dssp             EECCTTCBHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC----------------
T ss_pred             EEecCCCcHHHHHHhhcc-cccCCCHHHHHHHHHHHHHHHHHHH---hCCEeecCCCHHHEEEcCCCCCccccccccccc
Confidence            999999999999976411 1256899999999999999999999   999999999999999984               


Q ss_pred             ----CCcEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          201 ----ENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       201 ----~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                          ...++|+|||++.........       .++..|++||
T Consensus       166 ~~~~~~~~kl~Dfg~~~~~~~~~~~-------~gt~~y~aPE  200 (289)
T 1x8b_A          166 WASNKVMFKIGDLGHVTRISSPQVE-------EGDSRFLANE  200 (289)
T ss_dssp             ----CCCEEECCCTTCEETTCSCCC-------CCCGGGCCHH
T ss_pred             ccCCceEEEEcccccccccCCcccc-------CCCccccChh
Confidence                447999999999987655332       2455677877

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.97  E-value=2.4e-30  Score=213.26  Aligned_cols=168  Identities=15%  Similarity=0.197  Sum_probs=135.0

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEE
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA  135 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  135 (241)
                      .++|...+.||+|+||.||+|.+  ++..||+|.+....   ......+.+|+.++..++||||+++++++...+..+++
T Consensus        10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   89 (278)
T 3cok_A           10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV   89 (278)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence            35688899999999999999998  88999999987542   22346789999999999999999999999999999999


Q ss_pred             EeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceec
Q 026214          136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI  215 (241)
Q Consensus       136 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~  215 (241)
                      |||+++++|.+++...    ...+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.++|+|||++...
T Consensus        90 ~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~  162 (278)
T 3cok_A           90 LEMCHNGEMNRYLKNR----VKPFSENEARHFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQL  162 (278)
T ss_dssp             EECCTTEEHHHHHHTC----SSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSSCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EecCCCCcHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEEeecceeec
Confidence            9999999999999654    356899999999999999999999   999999999999999999999999999999987


Q ss_pred             CCCCccccceeecCCceeeeecC
Q 026214          216 PEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ..+....   ....++..|++||
T Consensus       163 ~~~~~~~---~~~~~~~~y~aPE  182 (278)
T 3cok_A          163 KMPHEKH---YTLCGTPNYISPE  182 (278)
T ss_dssp             C----------------------
T ss_pred             cCCCCcc---eeccCCCCcCCcc
Confidence            6443221   1223456788888

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.97  E-value=9.1e-31  Score=223.38  Aligned_cols=162  Identities=19%  Similarity=0.272  Sum_probs=140.1

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCc---chhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRD---GHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      ..|...+.||+|+||.||+|.+  ++..||||++......   ..+.+.+|+.+++.++||||+++++++...+..++||
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  133 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM  133 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence            4477889999999999999998  8899999999764322   2356889999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||+. |+|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++....
T Consensus       134 e~~~-g~l~~~l~~~----~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~  205 (348)
T 1u5q_A          134 EYCL-GSASDLLEVH----KKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA  205 (348)
T ss_dssp             ECCS-EEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSS
T ss_pred             ecCC-CCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEeeccCceecC
Confidence            9997 6898888654    356899999999999999999999   9999999999999999999999999999998765


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ....       ..++..|+|||
T Consensus       206 ~~~~-------~~gt~~y~aPE  220 (348)
T 1u5q_A          206 PANS-------FVGTPYWMAPE  220 (348)
T ss_dssp             SBCC-------CCSCGGGCCHH
T ss_pred             CCCc-------ccCCcceeCHh
Confidence            4322       23455688887

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.97  E-value=4.7e-31  Score=220.90  Aligned_cols=177  Identities=21%  Similarity=0.251  Sum_probs=146.0

Q ss_pred             HHHhcCCCcCCeeecccceEEEEEEE-------CCeEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEecC
Q 026214           58 KLATNNYDQKNVITEDWGCILYKGFW-------QERLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLET  129 (241)
Q Consensus        58 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  129 (241)
                      ....++|...+.||+|+||.||+|.+       ++..||+|.+.... ....+.+.+|+.+++.++||||+++++++...
T Consensus        19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~   98 (314)
T 2ivs_A           19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD   98 (314)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS
T ss_pred             ccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecC
Confidence            34457788899999999999999987       33789999987643 23346789999999999999999999999999


Q ss_pred             CcceEEEeeCCCCCHHHHHhhcCCC-------------------CCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEcc
Q 026214          130 PIPILAFESVEYGNLRDRILSASQP-------------------QTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRD  190 (241)
Q Consensus       130 ~~~~lv~e~~~~gsL~~~l~~~~~~-------------------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~d  190 (241)
                      +..++||||+++++|.+++......                   ....+++..+..++.|++.||.|||   +.+++|+|
T Consensus        99 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~d  175 (314)
T 2ivs_A           99 GPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRD  175 (314)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH---HTTEECCC
T ss_pred             CceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH---HCCCcccc
Confidence            9999999999999999999765220                   1234889999999999999999999   99999999


Q ss_pred             CCCCCeeEcCCCcEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          191 FKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       191 lk~~Nill~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |||+||+++.++.+||+|||++..+........ ...+..+..|++||
T Consensus       176 ikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~-~~~~~~~~~y~aPE  222 (314)
T 2ivs_A          176 LAARNILVAEGRKMKISDFGLSRDVYEEDSYVK-RSQGRIPVKWMAIE  222 (314)
T ss_dssp             CSGGGEEEETTTEEEECCCTTCEECTTTSCEEC-SSCCCSCGGGCCHH
T ss_pred             cchheEEEcCCCCEEEcccccccccccccccee-ccCCCCcccccChh
Confidence            999999999999999999999998765543221 22333445678887

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.97  E-value=1.1e-30  Score=223.01  Aligned_cols=166  Identities=22%  Similarity=0.248  Sum_probs=128.1

Q ss_pred             HHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           59 LATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        59 ~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      ...+.|...+.||+|+||.||+|.+  ++..||+|.+....  ..+.+.+|+.++..++||||+++++++...+..++||
T Consensus        50 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~  127 (349)
T 2w4o_A           50 ALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVL  127 (349)
T ss_dssp             CGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEE
Confidence            3456788899999999999999999  67899999997653  3456889999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcC---CCcEEEccccCce
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNE---ENVAKMFDFSLSI  213 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~---~~~~ki~DfG~a~  213 (241)
                      ||+++++|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.   ++.+||+|||+++
T Consensus       128 e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~  199 (349)
T 2w4o_A          128 ELVTGGELFDRIVEK-----GYYSERDAADAVKQILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSK  199 (349)
T ss_dssp             CCCCSCBHHHHHTTC-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESSSSTTCCEEECCCC---
T ss_pred             EeCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCcccEEEecCCCCCCEEEccCcccc
Confidence            999999999999543     45899999999999999999999   999999999999999975   8899999999998


Q ss_pred             ecCCCCccccceeecCCceeeeecC
Q 026214          214 SIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .........    ...++..|++||
T Consensus       200 ~~~~~~~~~----~~~gt~~y~aPE  220 (349)
T 2w4o_A          200 IVEHQVLMK----TVCGTPGYCAPE  220 (349)
T ss_dssp             -----------------CGGGSCHH
T ss_pred             ccCcccccc----cccCCCCccCHH
Confidence            765442211    223455678887

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.97  E-value=2.7e-31  Score=234.03  Aligned_cols=175  Identities=17%  Similarity=0.238  Sum_probs=140.3

Q ss_pred             HHHHHHHhcCCCcCCeeecccceEEEEEEE-CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcc
Q 026214           54 AQELKLATNNYDQKNVITEDWGCILYKGFW-QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIP  132 (241)
Q Consensus        54 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  132 (241)
                      ...+....++|...+.||+|+||.||+|.+ .+..||||.+.... ...+.+.+|+.++++++||||+++++++.. +..
T Consensus       176 ~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~  253 (452)
T 1fmk_A          176 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPI  253 (452)
T ss_dssp             TTCSBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSC
T ss_pred             ccccccChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-Cce
Confidence            344555667788889999999999999999 56789999998654 345789999999999999999999999876 678


Q ss_pred             eEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCc
Q 026214          133 ILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS  212 (241)
Q Consensus       133 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a  212 (241)
                      ++||||+++|+|.+++...   ....+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++
T Consensus       254 ~iv~e~~~~gsL~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a  327 (452)
T 1fmk_A          254 YIVTEYMSKGSLLDFLKGE---TGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLA  327 (452)
T ss_dssp             EEEECCCTTCBHHHHHSHH---HHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTT
T ss_pred             EEEehhhcCCCHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEECCCCCEEECCCccc
Confidence            9999999999999999653   1245899999999999999999999   999999999999999999999999999999


Q ss_pred             eecCCCCccccceeecCCceeeeecC
Q 026214          213 ISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +.+..+.....  .....+..|+|||
T Consensus       328 ~~~~~~~~~~~--~~~~~~~~y~aPE  351 (452)
T 1fmk_A          328 RLIEDNEYTAR--QGAKFPIKWTAPE  351 (452)
T ss_dssp             C----------------CCGGGSCHH
T ss_pred             eecCCCceecc--cCCcccccccCHh
Confidence            88764432211  1222344578887

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.97  E-value=2.4e-30  Score=217.94  Aligned_cols=165  Identities=19%  Similarity=0.193  Sum_probs=142.7

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCc------chhhHHHHHHHHHhcCCCceeeEeeEEecCCcce
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRD------GHGSCINNIVYAAQMSHDHILKLIGCCLETPIPI  133 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  133 (241)
                      +.|...+.||+|+||.||+|.+  ++..||+|.+......      ..+.+.+|+.++..++||||+++++++...+..+
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   91 (321)
T 2a2a_A           12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVV   91 (321)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence            4588899999999999999999  7899999998764322      2466899999999999999999999999999999


Q ss_pred             EEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCC----cEEEccc
Q 026214          134 LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEEN----VAKMFDF  209 (241)
Q Consensus       134 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~----~~ki~Df  209 (241)
                      +||||+++++|.+++...     ..+++..+..++.|++.||.|||   +.+++|+||||+||+++.++    .++|+||
T Consensus        92 lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~lH---~~~ivH~dikp~NIl~~~~~~~~~~~kl~Df  163 (321)
T 2a2a_A           92 LILELVSGGELFDFLAQK-----ESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDF  163 (321)
T ss_dssp             EEECCCCSCBHHHHHHTC-----SCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred             EEEEcCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChHHEEEecCCCCcCCEEEccC
Confidence            999999999999999653     45899999999999999999999   99999999999999999887    7999999


Q ss_pred             cCceecCCCCccccceeecCCceeeeecC
Q 026214          210 SLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       210 G~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |++..+..+....    ...++..|++||
T Consensus       164 g~~~~~~~~~~~~----~~~gt~~y~aPE  188 (321)
T 2a2a_A          164 GLAHEIEDGVEFK----NIFGTPEFVAPE  188 (321)
T ss_dssp             TTCEECCTTCCCC----CCCSCGGGCCHH
T ss_pred             ccceecCcccccc----ccCCCCCccCcc
Confidence            9999876543221    223455678887

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.97  E-value=6.6e-31  Score=223.07  Aligned_cols=166  Identities=18%  Similarity=0.195  Sum_probs=143.2

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC--------cchhhHHHHHHHHHhcCCCceeeEeeEEecCC
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR--------DGHGSCINNIVYAAQMSHDHILKLIGCCLETP  130 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  130 (241)
                      .+.|...+.||+|+||.||+|.+  ++..||+|.+.....        .....+.+|+.++..++||||+++++++...+
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~  102 (335)
T 3dls_A           23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG  102 (335)
T ss_dssp             HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred             ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence            45788899999999999999998  889999999986532        13346788999999999999999999999999


Q ss_pred             cceEEEeeCCCC-CHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccc
Q 026214          131 IPILAFESVEYG-NLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDF  209 (241)
Q Consensus       131 ~~~lv~e~~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~Df  209 (241)
                      ..++||||+.+| +|.+++...     ..+++..+..++.|++.||.|||   ..+|+||||||+|||++.++.+||+||
T Consensus       103 ~~~lv~e~~~~g~~l~~~~~~~-----~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Df  174 (335)
T 3dls_A          103 FFQLVMEKHGSGLDLFAFIDRH-----PRLDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDF  174 (335)
T ss_dssp             EEEEEEECCTTSCBHHHHHHTC-----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCC
T ss_pred             EEEEEEEeCCCCccHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEEeccCHHHEEEcCCCcEEEeec
Confidence            999999999766 999999654     35899999999999999999999   999999999999999999999999999


Q ss_pred             cCceecCCCCccccceeecCCceeeeecC
Q 026214          210 SLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       210 G~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |++..+..+.....    ..++..|++||
T Consensus       175 g~a~~~~~~~~~~~----~~gt~~y~aPE  199 (335)
T 3dls_A          175 GSAAYLERGKLFYT----FCGTIEYCAPE  199 (335)
T ss_dssp             TTCEECCTTCCBCE----ECSCGGGCCHH
T ss_pred             ccceECCCCCceec----cCCCccccChh
Confidence            99998866543322    23456788887

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.97  E-value=8.8e-31  Score=223.73  Aligned_cols=176  Identities=17%  Similarity=0.121  Sum_probs=148.9

Q ss_pred             ccccCHHHHHHHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcC-----CCceee
Q 026214           49 YRIFSAQELKLATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMS-----HDHILK  121 (241)
Q Consensus        49 ~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~  121 (241)
                      ...+++.+.....++|...++||+|+||.||+|.+  ++..||+|.+.... .....+..|+.++..+.     ||||++
T Consensus        22 ~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~h~~iv~  100 (360)
T 3llt_A           22 IVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK-KYTRSAKIEADILKKIQNDDINNNNIVK  100 (360)
T ss_dssp             GGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH-HHHHHHHHHHHHHHHTCCCSTTGGGBCC
T ss_pred             ceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch-hhhhhhHHHHHHHHHhcccCCCCCCeec
Confidence            34566666667778999999999999999999999  88999999987532 33456788999999996     999999


Q ss_pred             EeeEEecCCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcC-
Q 026214          122 LIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNE-  200 (241)
Q Consensus       122 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~-  200 (241)
                      +++++...+..++||||+ +++|.+++...   ....+++..+..++.|++.||.|||   +.+|+||||||+|||++. 
T Consensus       101 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~---~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~  173 (360)
T 3llt_A          101 YHGKFMYYDHMCLIFEPL-GPSLYEIITRN---NYNGFHIEDIKLYCIEILKALNYLR---KMSLTHTDLKPENILLDDP  173 (360)
T ss_dssp             EEEEEEETTEEEEEECCC-CCBHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCT
T ss_pred             ccceeeECCeeEEEEcCC-CCCHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCcccEEEccc
Confidence            999999999999999999 78999999876   3345899999999999999999999   999999999999999975 


Q ss_pred             ------------------------CCcEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          201 ------------------------ENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       201 ------------------------~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                                              ++.+||+|||+|.........      ..++..|+|||
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~------~~gt~~y~aPE  229 (360)
T 3llt_A          174 YFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGS------IINTRQYRAPE  229 (360)
T ss_dssp             TCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCCCS------CCSCGGGCCHH
T ss_pred             cccccccchhcccccccccccccCCCCEEEEeccCceecCCCCcC------ccCcccccCcH
Confidence                                    788999999999876543322      12345678887

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.97  E-value=1.8e-30  Score=217.37  Aligned_cols=166  Identities=18%  Similarity=0.208  Sum_probs=137.7

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCc--chhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEe
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRD--GHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFE  137 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  137 (241)
                      ++|...+.||+|+||.||+|.+  ++..||+|++......  ..+.+.+|+.++..++||||+++++++...+..++|||
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE   82 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence            5688889999999999999999  6899999998665322  24568899999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCC
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE  217 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~  217 (241)
                      |+++++|.+++...     ..+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.+||+|||++..+..
T Consensus        83 ~~~~~~l~~~~~~~-----~~~~~~~~~~i~~~l~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  154 (311)
T 4agu_A           83 YCDHTVLHELDRYQ-----RGVPEHLVKSITWQTLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTG  154 (311)
T ss_dssp             CCSEEHHHHHHHTS-----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC-
T ss_pred             eCCCchHHHHHhhh-----cCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccC
Confidence            99998898887543     45899999999999999999999   99999999999999999999999999999998765


Q ss_pred             CCccccceeecCCceeeeecC
Q 026214          218 GGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +.....   ...++..|++||
T Consensus       155 ~~~~~~---~~~~~~~y~aPE  172 (311)
T 4agu_A          155 PSDYYD---DEVATRWYRSPE  172 (311)
T ss_dssp             --------------GGGCCHH
T ss_pred             cccccC---CCcCCccccChH
Confidence            433222   223455678887

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.97  E-value=9.9e-31  Score=217.22  Aligned_cols=171  Identities=17%  Similarity=0.244  Sum_probs=140.7

Q ss_pred             HHhcCCCcCC-eeecccceEEEEEEE----CCeEEEEEEeeccCC--cchhhHHHHHHHHHhcCCCceeeEeeEEecCCc
Q 026214           59 LATNNYDQKN-VITEDWGCILYKGFW----QERLISVMRFRESNR--DGHGSCINNIVYAAQMSHDHILKLIGCCLETPI  131 (241)
Q Consensus        59 ~~~~~~~~~~-~lg~G~~g~Vy~~~~----~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  131 (241)
                      .....|.... .||+|+||.||+|.+    ++..||+|.+.....  ...+.+.+|+.++..++||||+++++++ ..+.
T Consensus        13 ~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~   91 (291)
T 1xbb_A           13 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAES   91 (291)
T ss_dssp             CCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSS
T ss_pred             ecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCC
Confidence            3445676666 999999999999965    468899999876432  2256789999999999999999999999 5667


Q ss_pred             ceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccC
Q 026214          132 PILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL  211 (241)
Q Consensus       132 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~  211 (241)
                      .++||||+++++|.+++...     ..+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.+||+|||+
T Consensus        92 ~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~  163 (291)
T 1xbb_A           92 WMLVMEMAELGPLNKYLQQN-----RHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGL  163 (291)
T ss_dssp             EEEEEECCTTEEHHHHHHHC-----TTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTT
T ss_pred             cEEEEEeCCCCCHHHHHHhC-----cCCCHHHHHHHHHHHHHHHHHHH---hCCeEcCCCCcceEEEeCCCcEEEccCCc
Confidence            89999999999999999664     34899999999999999999999   99999999999999999999999999999


Q ss_pred             ceecCCCCccccceeecCCceeeeecC
Q 026214          212 SISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       212 a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +..+..+.........+..+..|++||
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~y~aPE  190 (291)
T 1xbb_A          164 SKALRADENYYKAQTHGKWPVKWYAPE  190 (291)
T ss_dssp             CEECCTTCSEEEC----CCCGGGCCHH
T ss_pred             ceeeccCCCcccccccCCCCceeeChH
Confidence            998877655444444444556688887

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.97  E-value=5.2e-31  Score=217.38  Aligned_cols=173  Identities=17%  Similarity=0.258  Sum_probs=143.2

Q ss_pred             HHHHHhcCCCcCCeeecccceEEEEEEE-CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceE
Q 026214           56 ELKLATNNYDQKNVITEDWGCILYKGFW-QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPIL  134 (241)
Q Consensus        56 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  134 (241)
                      ++....+.|...+.||+|+||.||+|.+ ++..||+|.+.... ...+.+.+|+.++..++||||+++++++. .+..++
T Consensus         7 ~~~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~   84 (279)
T 1qpc_A            7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYI   84 (279)
T ss_dssp             TTBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEE
T ss_pred             hcccCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEE
Confidence            3444557788899999999999999999 67789999987654 34678999999999999999999999986 456899


Q ss_pred             EEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCcee
Q 026214          135 AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSIS  214 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~  214 (241)
                      +|||+++++|.+++...   ....+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.+||+|||++..
T Consensus        85 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~  158 (279)
T 1qpc_A           85 ITEYMENGSLVDFLKTP---SGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARL  158 (279)
T ss_dssp             EEECCTTCBHHHHTTSH---HHHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             EEecCCCCCHHHHHhcC---CCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHhhEEEcCCCCEEECCCccccc
Confidence            99999999999999543   1225899999999999999999999   99999999999999999999999999999998


Q ss_pred             cCCCCccccceeecCCceeeeecC
Q 026214          215 IPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +.........  ....+..|++||
T Consensus       159 ~~~~~~~~~~--~~~~~~~y~aPE  180 (279)
T 1qpc_A          159 IEDNEYTARE--GAKFPIKWTAPE  180 (279)
T ss_dssp             CSSSCEECCT--TCCCCTTTSCHH
T ss_pred             ccCccccccc--CCCCccCccChh
Confidence            7654322211  112233577777

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.97  E-value=1.1e-30  Score=238.20  Aligned_cols=162  Identities=15%  Similarity=0.234  Sum_probs=132.6

Q ss_pred             eeecccceEEEEEEE----CCeEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCCCCC
Q 026214           69 VITEDWGCILYKGFW----QERLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGN  143 (241)
Q Consensus        69 ~lg~G~~g~Vy~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs  143 (241)
                      .||+|+||.||+|.+    ++..||||.++... ....+.+.+|+.+++.++||||+++++++.. +..++||||+++|+
T Consensus       343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~  421 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP  421 (613)
T ss_dssp             EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred             EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence            799999999999987    45679999997653 2356789999999999999999999999976 56899999999999


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCcccc
Q 026214          144 LRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGA  223 (241)
Q Consensus       144 L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~~~  223 (241)
                      |.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+|+.+..+.....
T Consensus       422 L~~~l~~~----~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~  494 (613)
T 2ozo_A          422 LHKFLVGK----REEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYT  494 (613)
T ss_dssp             HHHHHTTC----TTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-------
T ss_pred             HHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceee
Confidence            99999654    456899999999999999999999   99999999999999999999999999999998876655444


Q ss_pred             ceeecCCceeeeecC
Q 026214          224 KCLKSERTEICCVRE  238 (241)
Q Consensus       224 ~~~~~~~~~~~~~~e  238 (241)
                      ....+..+..|+|||
T Consensus       495 ~~~~~~~~~~y~APE  509 (613)
T 2ozo_A          495 ARSAGKWPLKWYAPE  509 (613)
T ss_dssp             -------CCTTSCHH
T ss_pred             eccCCCCccceeCHh
Confidence            444555556788887

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.97  E-value=9.2e-31  Score=221.86  Aligned_cols=179  Identities=26%  Similarity=0.290  Sum_probs=146.0

Q ss_pred             HHHHHhcCCCcCCeeecccceEEEEEEECC-------eEEEEEEeeccCC-cchhhHHHHHHHHHhcCCCceeeEeeEEe
Q 026214           56 ELKLATNNYDQKNVITEDWGCILYKGFWQE-------RLISVMRFRESNR-DGHGSCINNIVYAAQMSHDHILKLIGCCL  127 (241)
Q Consensus        56 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~-------~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~  127 (241)
                      .+....++|...+.||+|+||.||+|.+.+       ..||+|.+..... .....+.+|+.++..++||||+++++++.
T Consensus        41 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~  120 (343)
T 1luf_A           41 SLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCA  120 (343)
T ss_dssp             HTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred             eeEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence            344456889999999999999999999832       7899999976532 23467899999999999999999999999


Q ss_pred             cCCcceEEEeeCCCCCHHHHHhhcCCC-------------------CCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEE
Q 026214          128 ETPIPILAFESVEYGNLRDRILSASQP-------------------QTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVY  188 (241)
Q Consensus       128 ~~~~~~lv~e~~~~gsL~~~l~~~~~~-------------------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH  188 (241)
                      ..+..++||||+++++|.+++......                   ....+++..++.++.|++.||.|||   +.+|+|
T Consensus       121 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH---~~~ivH  197 (343)
T 1luf_A          121 VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVH  197 (343)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCC
T ss_pred             cCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeec
Confidence            999999999999999999999764210                   1256899999999999999999999   999999


Q ss_pred             ccCCCCCeeEcCCCcEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          189 RDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       189 ~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +||||+|||++.++.+||+|||++..+....... .......+..|++||
T Consensus       198 ~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~~~t~~y~aPE  246 (343)
T 1luf_A          198 RDLATRNCLVGENMVVKIADFGLSRNIYSADYYK-ADGNDAIPIRWMPPE  246 (343)
T ss_dssp             SCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC-----CCBCGGGCCHH
T ss_pred             CCCCcceEEECCCCeEEEeecCCCcccccCcccc-ccCCCcccceecChh
Confidence            9999999999999999999999998765432211 112233455678887

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.97  E-value=1.8e-30  Score=213.19  Aligned_cols=164  Identities=21%  Similarity=0.294  Sum_probs=129.3

Q ss_pred             hcCCCcCCeeecccceEEEEEEECCeEEEEEEeeccCC----cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           61 TNNYDQKNVITEDWGCILYKGFWQERLISVMRFRESNR----DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      .++|...+.||+|+||.||+|.+++..||+|.+.....    ...+.+.+|+.+++.++||||+++++++..++..++||
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   85 (271)
T 3dtc_A            6 FAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM   85 (271)
T ss_dssp             TTSEEEEEEEEEETTEEEEEEEETTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred             hhheeeeeeeccCCCeEEEEEEEcCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence            35688889999999999999999999999999875432    23467899999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCC---eEEccCCCCCeeEcC--------CCcEE
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRP---IVYRDFKTAHILFNE--------ENVAK  205 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~---ivH~dlk~~Nill~~--------~~~~k  205 (241)
                      ||+++++|.+++.      ...+++..+..++.|++.||.|||   +.+   ++|+||||+||+++.        ++.++
T Consensus        86 e~~~~~~L~~~~~------~~~~~~~~~~~i~~~l~~~l~~lH---~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~k  156 (271)
T 3dtc_A           86 EFARGGPLNRVLS------GKRIPPDILVNWAVQIARGMNYLH---DEAIVPIIHRDLKSSNILILQKVENGDLSNKILK  156 (271)
T ss_dssp             ECCTTEEHHHHHT------SSCCCHHHHHHHHHHHHHHHHHHH---HSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEE
T ss_pred             EcCCCCCHHHHhh------cCCCCHHHHHHHHHHHHHHHHHHH---hCCCCceeecCCchHHEEEecccccccccCcceE
Confidence            9999999999993      346899999999999999999999   777   999999999999986        67899


Q ss_pred             EccccCceecCCCCccccceeecCCceeeeecC
Q 026214          206 MFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       206 i~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |+|||++..+......     ...++..|++||
T Consensus       157 l~Dfg~~~~~~~~~~~-----~~~~~~~y~aPE  184 (271)
T 3dtc_A          157 ITDFGLAREWHRTTKM-----SAAGAYAWMAPE  184 (271)
T ss_dssp             ECCCCC------------------CCGGGSCHH
T ss_pred             EccCCccccccccccc-----CCCCccceeCHH
Confidence            9999999876554322     123455678887

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.97  E-value=7.5e-30  Score=211.77  Aligned_cols=168  Identities=21%  Similarity=0.184  Sum_probs=139.3

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCC
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVE  140 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~  140 (241)
                      .|.....||+|+||.||+|.+  ++..||+|.+........+.+.+|+.++..++||||+++++++...+..+++|||++
T Consensus        23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~  102 (295)
T 2clq_A           23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP  102 (295)
T ss_dssp             TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred             CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence            344556999999999999998  788999999987665566789999999999999999999999999999999999999


Q ss_pred             CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcC-CCcEEEccccCceecCCCC
Q 026214          141 YGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNE-ENVAKMFDFSLSISIPEGG  219 (241)
Q Consensus       141 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~-~~~~ki~DfG~a~~~~~~~  219 (241)
                      +++|.+++....  ....+++..+..++.|++.||.|||   +.+++|+||||+||+++. ++.+||+|||++..+....
T Consensus       103 ~~~L~~~l~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~  177 (295)
T 2clq_A          103 GGSLSALLRSKW--GPLKDNEQTIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN  177 (295)
T ss_dssp             EEEHHHHHHHTT--CCCTTCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC--
T ss_pred             CCCHHHHHHhhc--cCCCccHHHHHHHHHHHHHHHHHHH---hCCEEccCCChhhEEEECCCCCEEEeecccccccCCCC
Confidence            999999997652  2345778999999999999999999   999999999999999987 8999999999998875432


Q ss_pred             ccccceeecCCceeeeecC
Q 026214          220 TSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~e  238 (241)
                      ...   ....++..|++||
T Consensus       178 ~~~---~~~~~~~~y~aPE  193 (295)
T 2clq_A          178 PCT---ETFTGTLQYMAPE  193 (295)
T ss_dssp             ------CCCCCCGGGCCHH
T ss_pred             Ccc---cccCCCccccChh
Confidence            211   1223455677777

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=5.1e-30  Score=216.62  Aligned_cols=171  Identities=20%  Similarity=0.218  Sum_probs=138.2

Q ss_pred             HHHHHhcCCCcCCeeecccceEEEEEEECCeEEEEEEeeccCCcchhhHHHHHHHHHhc--CCCceeeEeeEEecC----
Q 026214           56 ELKLATNNYDQKNVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQM--SHDHILKLIGCCLET----  129 (241)
Q Consensus        56 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~~----  129 (241)
                      .-....++|...+.||+|+||.||+|.+++..||+|++....   ...+.+|.+++..+  +||||+++++++...    
T Consensus        31 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~  107 (337)
T 3mdy_A           31 VQRTIAKQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTGSW  107 (337)
T ss_dssp             HHTTHHHHCEEEEEEEEETTEEEEEEEETTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGG
T ss_pred             cccccccceEEEeEeecCCCeEEEEEEECCceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCC
Confidence            334455779999999999999999999999999999986542   34455666666555  999999999999877    


Q ss_pred             CcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCC--------CeEEccCCCCCeeEcCC
Q 026214          130 PIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPR--------PIVYRDFKTAHILFNEE  201 (241)
Q Consensus       130 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~--------~ivH~dlk~~Nill~~~  201 (241)
                      ...++||||+++|+|.+++...      .+++..+..++.|++.||.|||   +.        +|+||||||+|||++.+
T Consensus       108 ~~~~lv~e~~~~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~~~~ivH~Dikp~Nill~~~  178 (337)
T 3mdy_A          108 TQLYLITDYHENGSLYDYLKST------TLDAKSMLKLAYSSVSGLCHLH---TEIFSTQGKPAIAHRDLKSKNILVKKN  178 (337)
T ss_dssp             CEEEEEECCCTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHH---SCBCSTTCBCCEECSCCCGGGEEECTT
T ss_pred             CceEEEEeccCCCcHHHHhhcc------CCCHHHHHHHHHHHHHHHHHHH---HhhhhhccCCCEEecccchHHEEECCC
Confidence            6789999999999999999543      4899999999999999999999   77        99999999999999999


Q ss_pred             CcEEEccccCceecCCCCccccce-eecCCceeeeecC
Q 026214          202 NVAKMFDFSLSISIPEGGTSGAKC-LKSERTEICCVRE  238 (241)
Q Consensus       202 ~~~ki~DfG~a~~~~~~~~~~~~~-~~~~~~~~~~~~e  238 (241)
                      +.+||+|||+|..+.......... ....++..|+|||
T Consensus       179 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE  216 (337)
T 3mdy_A          179 GTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPE  216 (337)
T ss_dssp             SCEEECCCTTCEECC---------CCSSCSCGGGCCHH
T ss_pred             CCEEEEeCCCceeeccccccccCCCCCCccCcceeChh
Confidence            999999999998876554332211 1234566788888

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.97  E-value=9.5e-31  Score=222.07  Aligned_cols=179  Identities=19%  Similarity=0.164  Sum_probs=141.9

Q ss_pred             HHHHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeecc-----CCcchhhHHHHHHHHHhcCCCceeeEeeEEecC
Q 026214           57 LKLATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRES-----NRDGHGSCINNIVYAAQMSHDHILKLIGCCLET  129 (241)
Q Consensus        57 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  129 (241)
                      +....++|...+.||+|+||.||+|.+  ++..||+|.+...     .....+.+.+|+.+++.++||||+++++++.+.
T Consensus        21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~  100 (345)
T 3hko_A           21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE  100 (345)
T ss_dssp             HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence            345567799999999999999999998  7889999998753     234457799999999999999999999999999


Q ss_pred             CcceEEEeeCCCCCHHHHHhhcCCC-----------------------------------CCCCCCHHHHHHHHHHHHHH
Q 026214          130 PIPILAFESVEYGNLRDRILSASQP-----------------------------------QTEPLLMKHRLKIAMDIAHA  174 (241)
Q Consensus       130 ~~~~lv~e~~~~gsL~~~l~~~~~~-----------------------------------~~~~l~~~~~~~i~~~i~~~  174 (241)
                      +..++||||+++|+|.+++......                                   ....+++..+..++.|++.|
T Consensus       101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~  180 (345)
T 3hko_A          101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA  180 (345)
T ss_dssp             SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred             CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence            9999999999999999998521000                                   01224567788899999999


Q ss_pred             HHHHhCCCCCCeEEccCCCCCeeEcCCC--cEEEccccCceecCCCCcc-ccceeecCCceeeeecC
Q 026214          175 LAYLHFGFPRPIVYRDFKTAHILFNEEN--VAKMFDFSLSISIPEGGTS-GAKCLKSERTEICCVRE  238 (241)
Q Consensus       175 l~~lH~~~~~~ivH~dlk~~Nill~~~~--~~ki~DfG~a~~~~~~~~~-~~~~~~~~~~~~~~~~e  238 (241)
                      |.|||   +.+|+|+||||+|||++.++  .+||+|||++..+...... ........++..|+|||
T Consensus       181 l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE  244 (345)
T 3hko_A          181 LHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPE  244 (345)
T ss_dssp             HHHHH---HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHH
T ss_pred             HHHHH---HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCch
Confidence            99999   99999999999999998766  8999999999987543221 11222334566688887

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.97  E-value=9.4e-31  Score=221.18  Aligned_cols=168  Identities=19%  Similarity=0.328  Sum_probs=134.6

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCe----EEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QER----LISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPIL  134 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  134 (241)
                      ++|...+.||+|+||.||+|.+  ++.    .||+|.+.... ....+.+.+|+.+++.++||||+++++++..+. .++
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~   93 (327)
T 3poz_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL   93 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred             HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence            4588889999999999999998  444    46888876432 344577999999999999999999999998754 778


Q ss_pred             EEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCcee
Q 026214          135 AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSIS  214 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~  214 (241)
                      ++||+.+|+|.+++...    ...+++..++.++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+|+.
T Consensus        94 v~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~  166 (327)
T 3poz_A           94 ITQLMPFGCLLDYVREH----KDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL  166 (327)
T ss_dssp             EEECCTTCBHHHHHHHS----TTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTHHHH
T ss_pred             EEEecCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCChheEEECCCCCEEEccCcceeE
Confidence            99999999999999775    456899999999999999999999   99999999999999999999999999999998


Q ss_pred             cCCCCccccceeecCCceeeeecC
Q 026214          215 IPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +..+...... .....+..|++||
T Consensus       167 ~~~~~~~~~~-~~~~~t~~y~aPE  189 (327)
T 3poz_A          167 LGAEEKEYHA-EGGKVPIKWMALE  189 (327)
T ss_dssp             HTTTCC--------CCCGGGSCHH
T ss_pred             ccCCcccccc-cCCCccccccChH
Confidence            8665433222 2333455688887

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.97  E-value=3.3e-30  Score=222.37  Aligned_cols=177  Identities=19%  Similarity=0.241  Sum_probs=146.1

Q ss_pred             HHHhcCCCcCCeeecccceEEEEEEE---------CCeEEEEEEeeccCC-cchhhHHHHHHHHHhc-CCCceeeEeeEE
Q 026214           58 KLATNNYDQKNVITEDWGCILYKGFW---------QERLISVMRFRESNR-DGHGSCINNIVYAAQM-SHDHILKLIGCC  126 (241)
Q Consensus        58 ~~~~~~~~~~~~lg~G~~g~Vy~~~~---------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~  126 (241)
                      ....++|...+.||+|+||.||+|.+         .+..||+|++..... .....+.+|+.++..+ +||||+++++++
T Consensus        65 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~  144 (382)
T 3tt0_A           65 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC  144 (382)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             ccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeee
Confidence            34456788899999999999999996         125799999976532 2346789999999999 999999999999


Q ss_pred             ecCCcceEEEeeCCCCCHHHHHhhcCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCC
Q 026214          127 LETPIPILAFESVEYGNLRDRILSASQ-----------PQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH  195 (241)
Q Consensus       127 ~~~~~~~lv~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~N  195 (241)
                      ...+..++||||+++|+|.+++.....           .....+++..+..++.|++.||.|||   +.+|+||||||+|
T Consensus       145 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~N  221 (382)
T 3tt0_A          145 TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARN  221 (382)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGG
T ss_pred             ccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCcce
Confidence            999999999999999999999987521           11245899999999999999999999   9999999999999


Q ss_pred             eeEcCCCcEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          196 ILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       196 ill~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ||++.++.+||+|||+|+.+....... ....+..+..|+|||
T Consensus       222 Ill~~~~~~kL~DFG~a~~~~~~~~~~-~~~~~~~t~~y~aPE  263 (382)
T 3tt0_A          222 VLVTEDNVMKIADFGLARDIHHIDYYK-KTTNGRLPVKWMAPE  263 (382)
T ss_dssp             EEECTTCCEEECSCSCCCCSSCCCTTC-CCTTCCCGGGGSCHH
T ss_pred             EEEcCCCcEEEcccCcccccccccccc-cccCCCCCcceeCHH
Confidence            999999999999999999776543221 112233455678887

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.97  E-value=1.4e-30  Score=225.81  Aligned_cols=168  Identities=17%  Similarity=0.192  Sum_probs=142.0

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEecCC--cceEEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLETP--IPILAF  136 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv~  136 (241)
                      +.|...+.||+|+||.||+|.+  ++..||+|.+.... ......+.+|+.+++.++||||+++++++...+  ..++||
T Consensus         9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~   88 (396)
T 4eut_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM   88 (396)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence            5688889999999999999999  68999999997643 233567889999999999999999999998765  679999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeE----cCCCcEEEccccCc
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILF----NEENVAKMFDFSLS  212 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill----~~~~~~ki~DfG~a  212 (241)
                      ||+++|+|.+++....  ....+++..+..++.|++.||.|||   +.+|+||||||+|||+    +.++.+||+|||+|
T Consensus        89 e~~~~g~L~~~l~~~~--~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a  163 (396)
T 4eut_A           89 EFCPCGSLYTVLEEPS--NAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA  163 (396)
T ss_dssp             CCCTTEEHHHHTTSGG--GTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEECTTSCEEEEECCGGGC
T ss_pred             ecCCCCCHHHHHHhhh--cccCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCcCHHHEEEeecCCCceeEEEecCCCc
Confidence            9999999999996642  1334899999999999999999999   9999999999999999    77788999999999


Q ss_pred             eecCCCCccccceeecCCceeeeecC
Q 026214          213 ISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +.+..+....    ...++..|++||
T Consensus       164 ~~~~~~~~~~----~~~gt~~y~aPE  185 (396)
T 4eut_A          164 RELEDDEQFV----SLYGTEEYLHPD  185 (396)
T ss_dssp             EECCCGGGSS----CSSSCCTTCCHH
T ss_pred             eEccCCCccc----cccCCccccCHH
Confidence            9876554322    223556778887

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.97  E-value=1.2e-30  Score=215.77  Aligned_cols=169  Identities=20%  Similarity=0.246  Sum_probs=129.7

Q ss_pred             HhcCCCcCCeeecccceEEEEEEE-----CCeEEEEEEeeccCC-cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcce
Q 026214           60 ATNNYDQKNVITEDWGCILYKGFW-----QERLISVMRFRESNR-DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPI  133 (241)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  133 (241)
                      ..+.|...+.||+|+||.||+|.+     .+..||+|.+..... ...+.+.+|+.++..++||||+++++++. ++..+
T Consensus        13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~   91 (281)
T 1mp8_A           13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW   91 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCE
T ss_pred             ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccE
Confidence            346688899999999999999998     245699998875432 23467899999999999999999999984 56789


Q ss_pred             EEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCce
Q 026214          134 LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSI  213 (241)
Q Consensus       134 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~  213 (241)
                      +||||+++++|.+++...    ...+++..+..++.|++.||.|||   +.+++|+||||+|||++.++.+||+|||+++
T Consensus        92 lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~  164 (281)
T 1mp8_A           92 IIMELCTLGELRSFLQVR----KYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSR  164 (281)
T ss_dssp             EEEECCTTEEHHHHHHHT----TTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC-----
T ss_pred             EEEecCCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHEEECCCCCEEECcccccc
Confidence            999999999999999765    346899999999999999999999   9999999999999999999999999999998


Q ss_pred             ecCCCCccccceeecCCceeeeecC
Q 026214          214 SIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .+........  ..+..+..|++||
T Consensus       165 ~~~~~~~~~~--~~~~~~~~y~aPE  187 (281)
T 1mp8_A          165 YMEDSTYYKA--SKGKLPIKWMAPE  187 (281)
T ss_dssp             ----------------CCGGGCCHH
T ss_pred             ccCccccccc--ccCCCcccccChh
Confidence            8765432222  2233344678887

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.97  E-value=1.3e-30  Score=216.06  Aligned_cols=169  Identities=19%  Similarity=0.191  Sum_probs=139.1

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      +.|...+.||+|+||.||+|.+  ++..||+|.+.... ....+.+.+|+.+++.++||||+++++++......++||||
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~  101 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET  101 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence            4588899999999999999998  78899999987654 23457789999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeE---cCCCcEEEccccCceec
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILF---NEENVAKMFDFSLSISI  215 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill---~~~~~~ki~DfG~a~~~  215 (241)
                      +++++|.+.+..... ....+++..+..++.|++.||.|||   +.+|+|+||||+||++   +.++.+||+|||++..+
T Consensus       102 ~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~  177 (285)
T 3is5_A          102 CEGGELLERIVSAQA-RGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF  177 (285)
T ss_dssp             CSCCBHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred             CCCCcHHHHHHhhhh-cccCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence            999999999865311 1356899999999999999999999   9999999999999999   45678999999999877


Q ss_pred             CCCCccccceeecCCceeeeecC
Q 026214          216 PEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ..+....    ...++..|++||
T Consensus       178 ~~~~~~~----~~~~t~~y~aPE  196 (285)
T 3is5_A          178 KSDEHST----NAAGTALYMAPE  196 (285)
T ss_dssp             -------------CTTGGGCCHH
T ss_pred             CCcccCc----CcccccCcCChH
Confidence            6543222    223455678887

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=2.9e-30  Score=219.11  Aligned_cols=178  Identities=19%  Similarity=0.258  Sum_probs=142.8

Q ss_pred             HHHHhcCCCcCCeeecccceEEEEEEE-------CCeEEEEEEeeccC-CcchhhHHHHHHHHHhc-CCCceeeEeeEEe
Q 026214           57 LKLATNNYDQKNVITEDWGCILYKGFW-------QERLISVMRFRESN-RDGHGSCINNIVYAAQM-SHDHILKLIGCCL  127 (241)
Q Consensus        57 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~  127 (241)
                      +....++|...+.||+|+||.||+|.+       ++..||+|.+.... ......+.+|+.++.++ +||||+++++++.
T Consensus        40 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~  119 (344)
T 1rjb_A           40 WEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT  119 (344)
T ss_dssp             GBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             cccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence            344567888899999999999999996       35689999987542 23457799999999999 9999999999999


Q ss_pred             cCCcceEEEeeCCCCCHHHHHhhcCCC------------------CCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEc
Q 026214          128 ETPIPILAFESVEYGNLRDRILSASQP------------------QTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYR  189 (241)
Q Consensus       128 ~~~~~~lv~e~~~~gsL~~~l~~~~~~------------------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~  189 (241)
                      ..+..++||||+++|+|.+++......                  ....+++..+..++.|++.||.|||   +.+|+|+
T Consensus       120 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~  196 (344)
T 1rjb_A          120 LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHR  196 (344)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEET
T ss_pred             eCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCcccC
Confidence            999999999999999999999765210                  0134799999999999999999999   9999999


Q ss_pred             cCCCCCeeEcCCCcEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          190 DFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       190 dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ||||+|||++.++.+||+|||++..+..+..... ......+..|+|||
T Consensus       197 Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~-~~~~~~t~~y~aPE  244 (344)
T 1rjb_A          197 DLAARNVLVTHGKVVKICDFGLARDIMSDSNYVV-RGNARLPVKWMAPE  244 (344)
T ss_dssp             TCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEE-ETTEEECGGGCCHH
T ss_pred             CCChhhEEEcCCCcEEeCCCccCcccccCcccee-ccCccCccCccCHH
Confidence            9999999999999999999999987765433211 11111234578887

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.97  E-value=1.1e-30  Score=224.99  Aligned_cols=167  Identities=19%  Similarity=0.170  Sum_probs=133.6

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC---cchhhHHHHHHH-HHhcCCCceeeEeeEEecCCcceE
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR---DGHGSCINNIVY-AAQMSHDHILKLIGCCLETPIPIL  134 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~---~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~l  134 (241)
                      .++|...+.||+|+||.||+|.+  ++..||+|.+.....   .....+.+|..+ ++.++||||+++++++.+.+..++
T Consensus        37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l  116 (373)
T 2r5t_A           37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF  116 (373)
T ss_dssp             GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence            35688899999999999999999  788999999976532   233456677766 467899999999999999999999


Q ss_pred             EEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCcee
Q 026214          135 AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSIS  214 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~  214 (241)
                      ||||+++|+|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++.
T Consensus       117 v~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~ikL~DFG~a~~  188 (373)
T 2r5t_A          117 VLDYINGGELFYHLQRE-----RCFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKE  188 (373)
T ss_dssp             EEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCBCGG
T ss_pred             EEeCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEeeCccccc
Confidence            99999999999999764     34889999999999999999999   99999999999999999999999999999986


Q ss_pred             cCCCCccccceeecCCceeeeecC
Q 026214          215 IPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ........   ....++..|+|||
T Consensus       189 ~~~~~~~~---~~~~gt~~y~aPE  209 (373)
T 2r5t_A          189 NIEHNSTT---STFCGTPEYLAPE  209 (373)
T ss_dssp             GBCCCCCC---CSBSCCCCCCCHH
T ss_pred             cccCCCcc---ccccCCccccCHH
Confidence            54332221   1223456788887

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.97  E-value=1.5e-30  Score=224.76  Aligned_cols=149  Identities=21%  Similarity=0.314  Sum_probs=123.5

Q ss_pred             HHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcC-CCceeeEeeEEecCC--c
Q 026214           59 LATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN--RDGHGSCINNIVYAAQMS-HDHILKLIGCCLETP--I  131 (241)
Q Consensus        59 ~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~--~  131 (241)
                      ...++|...+.||+|+||.||+|.+  ++..||+|++....  ......+.+|+.++..+. ||||+++++++...+  .
T Consensus         6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~   85 (388)
T 3oz6_A            6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD   85 (388)
T ss_dssp             HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred             cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence            3457799999999999999999998  88999999986532  234567889999999996 999999999997554  6


Q ss_pred             ceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccC
Q 026214          132 PILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL  211 (241)
Q Consensus       132 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~  211 (241)
                      .++||||++ ++|.+++...      .+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+
T Consensus        86 ~~lv~e~~~-~~L~~~~~~~------~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~  155 (388)
T 3oz6_A           86 VYLVFDYME-TDLHAVIRAN------ILEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGL  155 (388)
T ss_dssp             EEEEEECCS-EEHHHHHHHT------CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred             EEEEecccC-cCHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHeEEcCCCCEEecCCcc
Confidence            899999998 6999999543      4889999999999999999999   99999999999999999999999999999


Q ss_pred             ceecCC
Q 026214          212 SISIPE  217 (241)
Q Consensus       212 a~~~~~  217 (241)
                      |+.+..
T Consensus       156 a~~~~~  161 (388)
T 3oz6_A          156 SRSFVN  161 (388)
T ss_dssp             CEESSS
T ss_pred             cccccc
Confidence            998754

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.97  E-value=1.1e-30  Score=219.81  Aligned_cols=177  Identities=16%  Similarity=0.238  Sum_probs=129.1

Q ss_pred             HHHhcCCCcCCeeecccceEEEEEEE--CCe---EEEEEEeecc--CCcchhhHHHHHHHHHhcCCCceeeEeeEEecCC
Q 026214           58 KLATNNYDQKNVITEDWGCILYKGFW--QER---LISVMRFRES--NRDGHGSCINNIVYAAQMSHDHILKLIGCCLETP  130 (241)
Q Consensus        58 ~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~---~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  130 (241)
                      ....++|...+.||+|+||.||+|.+  ++.   .||+|.+...  .....+.+.+|+.+++.++||||+++++++....
T Consensus        19 ~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   98 (323)
T 3qup_A           19 LIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSR   98 (323)
T ss_dssp             BCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-
T ss_pred             ccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccc
Confidence            34456799999999999999999998  332   7999998764  2334577999999999999999999999998776


Q ss_pred             cc------eEEEeeCCCCCHHHHHhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCc
Q 026214          131 IP------ILAFESVEYGNLRDRILSASQ-PQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENV  203 (241)
Q Consensus       131 ~~------~lv~e~~~~gsL~~~l~~~~~-~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~  203 (241)
                      ..      +++|||+.+++|.+++..... .....+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.
T Consensus        99 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~Dikp~NIli~~~~~  175 (323)
T 3qup_A           99 AKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMT  175 (323)
T ss_dssp             ------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSC
T ss_pred             cccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH---cCCcccCCCCcceEEEcCCCC
Confidence            55      999999999999999975421 12336899999999999999999999   999999999999999999999


Q ss_pred             EEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          204 AKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       204 ~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +||+|||+|+.+..+...... .....+..|++||
T Consensus       176 ~kl~Dfg~a~~~~~~~~~~~~-~~~~~~~~y~aPE  209 (323)
T 3qup_A          176 VCVADFGLSRKIYSGDYYRQG-CASKLPVKWLALE  209 (323)
T ss_dssp             EEECCCCC------------------CCGGGCCHH
T ss_pred             EEEeecccccccccccccccc-ccccCcccccCch
Confidence            999999999887654432221 2222344677887

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.97  E-value=1.3e-30  Score=213.34  Aligned_cols=168  Identities=20%  Similarity=0.306  Sum_probs=142.9

Q ss_pred             hcCCCcCCeeecccceEEEEEEE-CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeC
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW-QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESV  139 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  139 (241)
                      .++|...+.||+|+||.||+|.+ ++..||+|.+.... ...+.+.+|+.++..++||||+++++++...+..+++|||+
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   85 (267)
T 3t9t_A            7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM   85 (267)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTT-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred             hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence            35678889999999999999999 88899999998754 34467999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCC
Q 026214          140 EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGG  219 (241)
Q Consensus       140 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~  219 (241)
                      ++++|.+++...    ...+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.++|+|||++.....+.
T Consensus        86 ~~~~L~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~  158 (267)
T 3t9t_A           86 EHGCLSDYLRTQ----RGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ  158 (267)
T ss_dssp             TTCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH
T ss_pred             CCCcHHHHHhhC----cccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEECCCCCEEEccccccccccccc
Confidence            999999999765    346899999999999999999999   9999999999999999999999999999998765432


Q ss_pred             ccccceeecCCceeeeecC
Q 026214          220 TSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~e  238 (241)
                      ....  .....+..|++||
T Consensus       159 ~~~~--~~~~~~~~y~aPE  175 (267)
T 3t9t_A          159 YTSS--TGTKFPVKWASPE  175 (267)
T ss_dssp             HHST--TSTTCCGGGCCHH
T ss_pred             cccc--ccccccccccChh
Confidence            1111  1122334577776

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.97  E-value=1.6e-30  Score=229.89  Aligned_cols=163  Identities=17%  Similarity=0.207  Sum_probs=133.0

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeecc--CCcchhhHHHHHHHHHhcCCCceeeEeeEEecCC------
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRES--NRDGHGSCINNIVYAAQMSHDHILKLIGCCLETP------  130 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------  130 (241)
                      .++|...+.||+|+||.||+|.+  ++..||||++...  .....+.+.+|+.+++.++||||+++++++...+      
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  140 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ  140 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence            46788899999999999999998  8899999999764  2234567899999999999999999999997654      


Q ss_pred             cceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEcccc
Q 026214          131 IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFS  210 (241)
Q Consensus       131 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG  210 (241)
                      ..++||||+++ +|.+.+..       .+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||
T Consensus       141 ~~~lv~E~~~~-~l~~~~~~-------~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDlkp~NIll~~~~~~kl~DFG  209 (464)
T 3ttj_A          141 DVYLVMELMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFG  209 (464)
T ss_dssp             EEEEEEECCSE-EHHHHHTS-------CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCC
T ss_pred             eEEEEEeCCCC-CHHHHHhh-------cCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChHhEEEeCCCCEEEEEEE
Confidence            46999999984 68777732       3899999999999999999999   9999999999999999999999999999


Q ss_pred             CceecCCCCccccceeecCCceeeeecC
Q 026214          211 LSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       211 ~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +|+.........    ...++..|+|||
T Consensus       210 ~a~~~~~~~~~~----~~~gt~~y~aPE  233 (464)
T 3ttj_A          210 LARTAGTSFMMT----PYVVTRYYRAPE  233 (464)
T ss_dssp             CC-----CCCC--------CCCTTCCHH
T ss_pred             eeeecCCCcccC----CCcccccccCHH
Confidence            999776543222    223456688887

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.97  E-value=9.6e-30  Score=211.42  Aligned_cols=168  Identities=14%  Similarity=0.094  Sum_probs=143.2

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhc-CCCceeeEeeEEecCCcceEEEe
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQM-SHDHILKLIGCCLETPIPILAFE  137 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e  137 (241)
                      .++|...+.||+|+||.||+|.+  ++..||+|.+....  ....+.+|+.++..+ +|+|++++++++......+++||
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e   86 (298)
T 1csn_A            9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID   86 (298)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence            45688899999999999999997  89999999987543  446688999999999 89999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCc-----EEEccccCc
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENV-----AKMFDFSLS  212 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~-----~ki~DfG~a  212 (241)
                      |+ +++|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.     +||+|||++
T Consensus        87 ~~-~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~  158 (298)
T 1csn_A           87 LL-GPSLEDLLDLC----GRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMV  158 (298)
T ss_dssp             CC-CCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTC
T ss_pred             ec-CCCHHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEeccCCCCCCCeEEEEECccc
Confidence            99 89999999765    345899999999999999999999   999999999999999987765     999999999


Q ss_pred             eecCCCCcccc----ceeecCCceeeeecC
Q 026214          213 ISIPEGGTSGA----KCLKSERTEICCVRE  238 (241)
Q Consensus       213 ~~~~~~~~~~~----~~~~~~~~~~~~~~e  238 (241)
                      ..+..+.....    ......++..|+|||
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  188 (298)
T 1csn_A          159 KFYRDPVTKQHIPYREKKNLSGTARYMSIN  188 (298)
T ss_dssp             EESBCTTTCCBCCCCCCCCCCSCTTTCCHH
T ss_pred             cccccccccccccccCccCCCCCcccCCch
Confidence            98876543211    122334556778887

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=1.5e-30  Score=221.55  Aligned_cols=170  Identities=21%  Similarity=0.275  Sum_probs=136.6

Q ss_pred             HHHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCc-----chhhHHHHHHHHHhcCCCceeeEeeEEecCC
Q 026214           58 KLATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRD-----GHGSCINNIVYAAQMSHDHILKLIGCCLETP  130 (241)
Q Consensus        58 ~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  130 (241)
                      ....+.|...+.||+|+||.||+|.+  ++..||+|.+......     ....+.+|+.++..++||||+++++++...+
T Consensus         6 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   85 (346)
T 1ua2_A            6 KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS   85 (346)
T ss_dssp             -------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred             HHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC
Confidence            34457799999999999999999998  6899999998753211     2356889999999999999999999999999


Q ss_pred             cceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEcccc
Q 026214          131 IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFS  210 (241)
Q Consensus       131 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG  210 (241)
                      ..++||||+++ +|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||
T Consensus        86 ~~~lv~e~~~~-~l~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg  157 (346)
T 1ua2_A           86 NISLVFDFMET-DLEVIIKDN----SLVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFG  157 (346)
T ss_dssp             CCEEEEECCSE-EHHHHHTTC----CSSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCG
T ss_pred             ceEEEEEcCCC-CHHHHHHhc----CcCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCCHHHEEEcCCCCEEEEecc
Confidence            99999999985 999988654    346888899999999999999999   9999999999999999999999999999


Q ss_pred             CceecCCCCccccceeecCCceeeeecC
Q 026214          211 LSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       211 ~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +++.+..+.....   ...++..|+|||
T Consensus       158 ~a~~~~~~~~~~~---~~~~t~~y~aPE  182 (346)
T 1ua2_A          158 LAKSFGSPNRAYT---HQVVTRWYRAPE  182 (346)
T ss_dssp             GGSTTTSCCCCCC---CSCCCCTTCCHH
T ss_pred             cceeccCCcccCC---cccccccccCch
Confidence            9998765433221   223456678887

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.97  E-value=1e-30  Score=220.74  Aligned_cols=166  Identities=19%  Similarity=0.257  Sum_probs=134.8

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCc-chhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRD-GHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      ++|...+.||+|+||.||+|.+  ++..||+|.+...... ....+.+|+.+++.++||||+++++++...+..++||||
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   81 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence            4678889999999999999999  7899999998754322 223566899999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      ++ ++|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++.....+
T Consensus        82 ~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~  153 (324)
T 3mtl_A           82 LD-KDLKQYLDDC----GNIINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIP  153 (324)
T ss_dssp             CS-EEHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCCGGGEEECTTCCEEECSSSEEECC---
T ss_pred             cc-cCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCcCHHHEEECCCCCEEEccCcccccccCC
Confidence            98 6999999765    346899999999999999999999   999999999999999999999999999999876544


Q ss_pred             CccccceeecCCceeeeecC
Q 026214          219 GTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .....   ...++..|+|||
T Consensus       154 ~~~~~---~~~~t~~y~aPE  170 (324)
T 3mtl_A          154 TKTYD---NEVVTLWYRPPD  170 (324)
T ss_dssp             ------------CGGGCCHH
T ss_pred             ccccc---cccCcccccChh
Confidence            32221   223355678887

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.97  E-value=5.6e-30  Score=228.49  Aligned_cols=167  Identities=21%  Similarity=0.185  Sum_probs=140.8

Q ss_pred             HhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC-------------cchhhHHHHHHHHHhcCCCceeeEee
Q 026214           60 ATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR-------------DGHGSCINNIVYAAQMSHDHILKLIG  124 (241)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~l~~  124 (241)
                      ..+.|...++||+|+||.||+|.+  ++..||+|.+.....             ...+.+.+|+.+++.++||||+++++
T Consensus        34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~  113 (504)
T 3q5i_A           34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD  113 (504)
T ss_dssp             GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred             cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence            456788899999999999999999  788999999875431             23467899999999999999999999


Q ss_pred             EEecCCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCC--
Q 026214          125 CCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEEN--  202 (241)
Q Consensus       125 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~--  202 (241)
                      ++.+....++||||+++|+|.+.+...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++  
T Consensus       114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~  185 (504)
T 3q5i_A          114 VFEDKKYFYLVTEFYEGGELFEQIINR-----HKFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSL  185 (504)
T ss_dssp             EEECSSEEEEEEECCTTCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESSTTCC
T ss_pred             EEEcCCEEEEEEecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCcHHHEEEecCCCC
Confidence            999999999999999999999999665     34899999999999999999999   99999999999999998765  


Q ss_pred             -cEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          203 -VAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       203 -~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                       .+||+|||+|..+..+.....    ..++..|+|||
T Consensus       186 ~~~kl~Dfg~a~~~~~~~~~~~----~~gt~~y~aPE  218 (504)
T 3q5i_A          186 LNIKIVDFGLSSFFSKDYKLRD----RLGTAYYIAPE  218 (504)
T ss_dssp             SSEEECCCTTCEECCTTSCBCC----CCSCTTTCCHH
T ss_pred             ccEEEEECCCCEEcCCCCcccc----ccCCcCCCCHH
Confidence             699999999998866543222    23455678887

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.97  E-value=1.9e-30  Score=217.44  Aligned_cols=168  Identities=17%  Similarity=0.235  Sum_probs=133.2

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEe-----------
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCL-----------  127 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-----------  127 (241)
                      .+.|...+.||+|+||.||+|.+  ++..||+|.+........+.+.+|+.+++.++||||+++++++.           
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   89 (320)
T 2i6l_A           10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG   89 (320)
T ss_dssp             TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred             CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence            35688889999999999999999  68999999998765555678999999999999999999999874           


Q ss_pred             ---cCCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEc-CCCc
Q 026214          128 ---ETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFN-EENV  203 (241)
Q Consensus       128 ---~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~-~~~~  203 (241)
                         .....++||||+. |+|.+++.      ...+++..+..++.|++.||.|||   +.+++|+||||+||+++ .++.
T Consensus        90 ~~~~~~~~~lv~e~~~-~~L~~~~~------~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~  159 (320)
T 2i6l_A           90 SLTELNSVYIVQEYME-TDLANVLE------QGPLLEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLV  159 (320)
T ss_dssp             -CCSCSEEEEEEECCS-EEHHHHHT------TCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTTE
T ss_pred             cccccCceeEEeeccC-CCHHHHhh------cCCccHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCe
Confidence               3457899999998 69999993      345899999999999999999999   99999999999999997 5679


Q ss_pred             EEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          204 AKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       204 ~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +||+|||++..+...............+..|.+||
T Consensus       160 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE  194 (320)
T 2i6l_A          160 LKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPR  194 (320)
T ss_dssp             EEECCCTTCBCC--------CCCGGGSCCTTCCHH
T ss_pred             EEEccCccccccCCCcccccccccccccccccCcH
Confidence            99999999998765433333333444566788887

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.97  E-value=7.4e-30  Score=213.57  Aligned_cols=168  Identities=21%  Similarity=0.247  Sum_probs=137.6

Q ss_pred             HhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC-----cchhhHHHHHHHHHhcC---CCceeeEeeEEecC
Q 026214           60 ATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR-----DGHGSCINNIVYAAQMS---HDHILKLIGCCLET  129 (241)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~  129 (241)
                      ..++|...+.||+|+||.||+|.+  ++..||+|.+.....     .....+.+|+.++..+.   ||||+++++++...
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~   86 (308)
T 3g33_A            7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS   86 (308)
T ss_dssp             ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred             cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence            457899999999999999999997  889999999874321     12346778888877775   99999999999876


Q ss_pred             C-----cceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcE
Q 026214          130 P-----IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVA  204 (241)
Q Consensus       130 ~-----~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~  204 (241)
                      .     ..+++|||+. ++|.+++...   ....+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+
T Consensus        87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~  159 (308)
T 3g33_A           87 RTDREIKVTLVFEHVD-QDLRTYLDKA---PPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTV  159 (308)
T ss_dssp             CSSSEEEEEEEEECCC-CBHHHHHHTC---CTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCTTTEEECTTSCE
T ss_pred             CCCCceeEEEEehhhh-cCHHHHHhhc---cCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCE
Confidence            5     4799999997 6999999765   3345999999999999999999999   9999999999999999999999


Q ss_pred             EEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          205 KMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       205 ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ||+|||+|+.+........    ..++..|+|||
T Consensus       160 kl~Dfg~a~~~~~~~~~~~----~~gt~~y~aPE  189 (308)
T 3g33_A          160 KLADFGLARIYSYQMALTP----VVVTLWYRAPE  189 (308)
T ss_dssp             EECSCSCTTTSTTCCCSGG----GGCCCSSCCHH
T ss_pred             EEeeCccccccCCCcccCC----ccccccccCch
Confidence            9999999987765433221    22355678887

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.97  E-value=5.7e-31  Score=226.09  Aligned_cols=174  Identities=20%  Similarity=0.205  Sum_probs=140.8

Q ss_pred             hcCCCcCCeeecccceEEEEEEE-------CCeEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcc
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW-------QERLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIP  132 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  132 (241)
                      .++|...+.||+|+||.||+|.+       ++..||||++.... ......+.+|+.++..++||||+++++++......
T Consensus        70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~  149 (367)
T 3l9p_A           70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR  149 (367)
T ss_dssp             GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence            35678889999999999999994       56789999987543 23345689999999999999999999999999999


Q ss_pred             eEEEeeCCCCCHHHHHhhcCC--CCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCC---cEEEc
Q 026214          133 ILAFESVEYGNLRDRILSASQ--PQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEEN---VAKMF  207 (241)
Q Consensus       133 ~lv~e~~~~gsL~~~l~~~~~--~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~---~~ki~  207 (241)
                      ++||||+++|+|.+++.....  .....+++..++.++.|++.||.|||   +.+|+||||||+|||++.++   .+||+
T Consensus       150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kL~  226 (367)
T 3l9p_A          150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIG  226 (367)
T ss_dssp             EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred             EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEEecCCCCceEEEC
Confidence            999999999999999987532  12345899999999999999999999   99999999999999998554   59999


Q ss_pred             cccCceecCCCCccccceeecCCceeeeecC
Q 026214          208 DFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       208 DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |||+|+.+........ ......+..|+|||
T Consensus       227 DFG~a~~~~~~~~~~~-~~~~~~t~~y~aPE  256 (367)
T 3l9p_A          227 DFGMARDIYRAGYYRK-GGCAMLPVKWMPPE  256 (367)
T ss_dssp             CCHHHHHHHHHSSCTT-CCGGGSCGGGCCHH
T ss_pred             CCcccccccccccccc-CCCcCCcccEECHH
Confidence            9999986643221111 11222345678887

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.97  E-value=1.5e-30  Score=219.63  Aligned_cols=168  Identities=17%  Similarity=0.291  Sum_probs=136.4

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeE----EEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERL----ISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPIL  134 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  134 (241)
                      ++|...+.||+|+||.||+|.+  ++..    ||+|.+.... ......+.+|+.++..++||||+++++++. ++..++
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~   91 (325)
T 3kex_A           13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL   91 (325)
T ss_dssp             TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred             hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence            4577889999999999999998  4443    7888775433 234467889999999999999999999986 456889


Q ss_pred             EEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCcee
Q 026214          135 AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSIS  214 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~  214 (241)
                      ||||+.+|+|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+|+.
T Consensus        92 v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~  164 (325)
T 3kex_A           92 VTQYLPLGSLLDHVRQH----RGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADL  164 (325)
T ss_dssp             EEECCTTCBSHHHHHSS----GGGSCTTHHHHHHHHHHHHHHHHH---HTTCCCSCCSSTTEEESSSSCEEECSCSGGGG
T ss_pred             EEEeCCCCCHHHHHHHc----cccCCHHHHHHHHHHHHHHHHHHH---hCCCCCCccchheEEECCCCeEEECCCCcccc
Confidence            99999999999999654    346889999999999999999999   99999999999999999999999999999998


Q ss_pred             cCCCCccccceeecCCceeeeecC
Q 026214          215 IPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +..+....... ....+..|++||
T Consensus       165 ~~~~~~~~~~~-~~~~~~~y~aPE  187 (325)
T 3kex_A          165 LPPDDKQLLYS-EAKTPIKWMALE  187 (325)
T ss_dssp             SCCCTTCCC------CCTTTSCHH
T ss_pred             cCccccccccc-CCCCcccccChH
Confidence            86654332211 122333577777

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.97  E-value=9.5e-31  Score=220.44  Aligned_cols=179  Identities=18%  Similarity=0.209  Sum_probs=143.0

Q ss_pred             cccCHHHHHHHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhc-CCCceeeEeeEE
Q 026214           50 RIFSAQELKLATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQM-SHDHILKLIGCC  126 (241)
Q Consensus        50 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~  126 (241)
                      ..++..++....+.|...+.||+|+||.||+|.+  ++..||+|.+.... .....+.+|+.++..+ +||||+++++++
T Consensus        12 ~~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~   90 (326)
T 2x7f_A           12 DEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAF   90 (326)
T ss_dssp             ----CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEE
T ss_pred             hhccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEE
Confidence            3345555566778899999999999999999999  88999999987654 3457789999999999 899999999999


Q ss_pred             ec------CCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcC
Q 026214          127 LE------TPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNE  200 (241)
Q Consensus       127 ~~------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~  200 (241)
                      ..      .+..++||||+++++|.+++...   ....+++..+..++.|++.||.|||   +.+++|+||||+||+++.
T Consensus        91 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~  164 (326)
T 2x7f_A           91 IKKNPPGMDDQLWLVMEFCGAGSVTDLIKNT---KGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTE  164 (326)
T ss_dssp             EECC--CCCCEEEEEEECCTTEEHHHHHHHS---GGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECT
T ss_pred             eeccCccccceEEEEEEcCCCCcHHHHHHhc---ccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCcHHHEEEcC
Confidence            76      46789999999999999999765   2356899999999999999999999   999999999999999999


Q ss_pred             CCcEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          201 ENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       201 ~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ++.+||+|||++..+.......   ....++..|++||
T Consensus       165 ~~~~kl~Dfg~~~~~~~~~~~~---~~~~~~~~y~aPE  199 (326)
T 2x7f_A          165 NAEVKLVDFGVSAQLDRTVGRR---NTFIGTPYWMAPE  199 (326)
T ss_dssp             TCCEEECCCTTTC----------------CCGGGCCHH
T ss_pred             CCCEEEeeCcCceecCcCcccc---ccccCCccccChh
Confidence            9999999999998775432211   1123445677777

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.97  E-value=2.9e-30  Score=225.46  Aligned_cols=167  Identities=17%  Similarity=0.170  Sum_probs=134.3

Q ss_pred             HHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC--------CcchhhHHHHHHHHHhcCCCceeeEeeEEec
Q 026214           59 LATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN--------RDGHGSCINNIVYAAQMSHDHILKLIGCCLE  128 (241)
Q Consensus        59 ~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~  128 (241)
                      ...+.|...+.||+|+||.||+|.+  ++..||+|.+....        ......+.+|+.++++++||||+++++++. 
T Consensus       132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-  210 (419)
T 3i6u_A          132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-  210 (419)
T ss_dssp             HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-
T ss_pred             hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-
Confidence            3457899999999999999999999  78999999987542        112345889999999999999999999975 


Q ss_pred             CCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCC---CcEE
Q 026214          129 TPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEE---NVAK  205 (241)
Q Consensus       129 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~---~~~k  205 (241)
                      .+..++||||+++++|.+++..     ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.+   +.+|
T Consensus       211 ~~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~~~~k  282 (419)
T 3i6u_A          211 AEDYYIVLELMEGGELFDKVVG-----NKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIK  282 (419)
T ss_dssp             SSEEEEEEECCTTCBGGGGTSS-----SCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSSSCCEE
T ss_pred             cCceEEEEEcCCCCcHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCCCcceEE
Confidence            4557999999999999998854     345899999999999999999999   9999999999999999654   4599


Q ss_pred             EccccCceecCCCCccccceeecCCceeeeecC
Q 026214          206 MFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       206 i~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |+|||+|+.+.......    ...++..|+|||
T Consensus       283 l~DFG~a~~~~~~~~~~----~~~gt~~y~aPE  311 (419)
T 3i6u_A          283 ITDFGHSKILGETSLMR----TLCGTPTYLAPE  311 (419)
T ss_dssp             ECCSSTTTSCC---------------CTTCCTT
T ss_pred             EeecccceecCCCcccc----ccCCCCCccCce
Confidence            99999999876543222    223456788888

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.97  E-value=5.1e-30  Score=228.25  Aligned_cols=165  Identities=18%  Similarity=0.202  Sum_probs=137.9

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEe
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFE  137 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  137 (241)
                      +.|...+.||+|+||.||+|.+  ++..||+|.+....  ......+.+|+.+++.++||||+++++++...+..++|||
T Consensus        37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  116 (494)
T 3lij_A           37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME  116 (494)
T ss_dssp             HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence            4588899999999999999999  78999999987643  2345678999999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcC---CCcEEEccccCcee
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNE---ENVAKMFDFSLSIS  214 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~---~~~~ki~DfG~a~~  214 (241)
                      |+++|+|.+.+...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.   ++.+||+|||+|..
T Consensus       117 ~~~~g~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~  188 (494)
T 3lij_A          117 CYKGGELFDEIIHR-----MKFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAV  188 (494)
T ss_dssp             CCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred             cCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChhhEEEeCCCCCCcEEEEECCCCeE
Confidence            99999999988665     35899999999999999999999   999999999999999976   45599999999998


Q ss_pred             cCCCCccccceeecCCceeeeecC
Q 026214          215 IPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +.......    ...++..|+|||
T Consensus       189 ~~~~~~~~----~~~gt~~y~aPE  208 (494)
T 3lij_A          189 FENQKKMK----ERLGTAYYIAPE  208 (494)
T ss_dssp             CBTTBCBC----CCCSCTTTCCHH
T ss_pred             CCCCcccc----ccCCCcCeeCHH
Confidence            76553322    123455688887

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.97  E-value=1e-29  Score=209.94  Aligned_cols=166  Identities=19%  Similarity=0.222  Sum_probs=142.1

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC--cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR--DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      .++|...+.||+|+||.||+|.+  ++..||+|.+.....  .....+.+|+.++..++||||+++++++...+..+++|
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   84 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   84 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence            46788899999999999999998  789999999876532  23466889999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCc---EEEccccCce
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENV---AKMFDFSLSI  213 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~---~ki~DfG~a~  213 (241)
                      ||+++++|.+.+...     ..+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.   +||+|||++.
T Consensus        85 e~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~  156 (284)
T 3kk8_A           85 DLVTGGELFEDIVAR-----EFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAI  156 (284)
T ss_dssp             CCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred             ecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeE
Confidence            999999999988665     35899999999999999999999   999999999999999976554   9999999998


Q ss_pred             ecCCCCccccceeecCCceeeeecC
Q 026214          214 SIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .........    ...++..|++||
T Consensus       157 ~~~~~~~~~----~~~~~~~y~aPE  177 (284)
T 3kk8_A          157 EVNDSEAWH----GFAGTPGYLSPE  177 (284)
T ss_dssp             ECCSSCBCC----CSCSCGGGCCHH
T ss_pred             EcccCcccc----CCCCCcCCcCch
Confidence            876544322    223455678887

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.97  E-value=8.3e-30  Score=211.82  Aligned_cols=167  Identities=15%  Similarity=0.135  Sum_probs=143.0

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC---cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEE
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR---DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA  135 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  135 (241)
                      .+.|...+.||+|+||.||++.+  ++..||+|.+.....   ...+.+.+|+.+++.++||||+++++++...+..+++
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   93 (294)
T 2rku_A           14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV   93 (294)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence            35688889999999999999999  688999999876432   2346688999999999999999999999999999999


Q ss_pred             EeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceec
Q 026214          136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI  215 (241)
Q Consensus       136 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~  215 (241)
                      |||+++++|.+++...     ..+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.+||+|||++...
T Consensus        94 ~e~~~~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~  165 (294)
T 2rku_A           94 LELCRRRSLLELHKRR-----KALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV  165 (294)
T ss_dssp             EECCTTCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEcCCCCEEEEeccCceec
Confidence            9999999999998654     35899999999999999999999   999999999999999999999999999999987


Q ss_pred             CCCCccccceeecCCceeeeecC
Q 026214          216 PEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ..+.....   ...++..|++||
T Consensus       166 ~~~~~~~~---~~~~~~~y~aPE  185 (294)
T 2rku_A          166 EYDGERKK---VLCGTPNYIAPE  185 (294)
T ss_dssp             CSTTCCBC---CCCSCCSSCCHH
T ss_pred             ccCccccc---cccCCCCcCCcc
Confidence            65433221   223455677887

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.97  E-value=3.8e-30  Score=212.32  Aligned_cols=164  Identities=20%  Similarity=0.289  Sum_probs=140.2

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEec----------
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLE----------  128 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----------  128 (241)
                      ..+|...+.||+|+||.||+|.+  ++..||+|.+....    ..+.+|+.++..++||||+++++++..          
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   85 (284)
T 2a19_B           10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK   85 (284)
T ss_dssp             HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred             ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence            35588899999999999999999  78999999987653    457889999999999999999998854          


Q ss_pred             ------CCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCC
Q 026214          129 ------TPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEEN  202 (241)
Q Consensus       129 ------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~  202 (241)
                            ....+++|||+++++|.+++...   ....+++..+..++.|++.||.|||   +.+++|+||||+||+++.++
T Consensus        86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~  159 (284)
T 2a19_B           86 NSSRSKTKCLFIQMEFCDKGTLEQWIEKR---RGEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTK  159 (284)
T ss_dssp             ---CCEEEEEEEEECCCCSCBHHHHHHHG---GGSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETT
T ss_pred             cccccCcceEEEEEeccCCCCHHHHHhhc---cCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHEEEcCCC
Confidence                  34579999999999999999765   2356899999999999999999999   99999999999999999999


Q ss_pred             cEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          203 VAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       203 ~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .+||+|||++..+..+....    ...++..|++||
T Consensus       160 ~~kl~Dfg~~~~~~~~~~~~----~~~~~~~y~aPE  191 (284)
T 2a19_B          160 QVKIGDFGLVTSLKNDGKRT----RSKGTLRYMSPE  191 (284)
T ss_dssp             EEEECCCTTCEESSCCSCCC----CCCSCCTTSCHH
T ss_pred             CEEECcchhheecccccccc----ccCCcccccChh
Confidence            99999999999886654322    223455677887

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.97  E-value=1.2e-29  Score=211.79  Aligned_cols=165  Identities=19%  Similarity=0.219  Sum_probs=142.7

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      ..|...+.||+|+||.||+|.+  ++..||+|.+.... ......+.+|+.++..++||||+++++++...+..++||||
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  101 (303)
T 3a7i_A           22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY  101 (303)
T ss_dssp             GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence            4588889999999999999998  78999999997653 33457789999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      +++++|.+++.      ...+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++..+...
T Consensus       102 ~~~~~L~~~~~------~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~  172 (303)
T 3a7i_A          102 LGGGSALDLLE------PGPLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT  172 (303)
T ss_dssp             CTTEEHHHHHT------TSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTT
T ss_pred             CCCCcHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChheEEECCCCCEEEeecccceecCcc
Confidence            99999999993      346899999999999999999999   999999999999999999999999999999887654


Q ss_pred             CccccceeecCCceeeeecC
Q 026214          219 GTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ....   ....++..|++||
T Consensus       173 ~~~~---~~~~~~~~y~aPE  189 (303)
T 3a7i_A          173 QIKR---NTFVGTPFWMAPE  189 (303)
T ss_dssp             BCCB---CCCCSCGGGCCHH
T ss_pred             cccc---CccCCCcCccCHH
Confidence            3221   1223445677887

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.97  E-value=3.5e-30  Score=210.95  Aligned_cols=163  Identities=20%  Similarity=0.308  Sum_probs=139.7

Q ss_pred             cCCCcCCeeecccceEEEEEEECCeEEEEEEeeccCC--cchhhHHHHHHHHHhcCCCceeeEeeEEecC--CcceEEEe
Q 026214           62 NNYDQKNVITEDWGCILYKGFWQERLISVMRFRESNR--DGHGSCINNIVYAAQMSHDHILKLIGCCLET--PIPILAFE  137 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~e  137 (241)
                      ++|...+.||+|+||.||+|.+++..||+|.+.....  ...+.+.+|+.++..++||||+++++++...  +..+++||
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e   89 (271)
T 3kmu_A           10 KQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITH   89 (271)
T ss_dssp             GGCEEEEEEEEETTEEEEEEEETTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEE
T ss_pred             HHhHHHHHhcCCCcceEEEEEECCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeec
Confidence            5688889999999999999999999999999876532  2346789999999999999999999999887  78899999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCC--eEEccCCCCCeeEcCCCcEEEccccCceec
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRP--IVYRDFKTAHILFNEENVAKMFDFSLSISI  215 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~--ivH~dlk~~Nill~~~~~~ki~DfG~a~~~  215 (241)
                      |+++++|.+++...   ....+++..+..++.|++.||.|||   +.+  ++|+||||+||+++.++.++|+|||++...
T Consensus        90 ~~~~~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~  163 (271)
T 3kmu_A           90 WMPYGSLYNVLHEG---TNFVVDQSQAVKFALDMARGMAFLH---TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSF  163 (271)
T ss_dssp             CCTTCBHHHHHHSC---SSCCCCHHHHHHHHHHHHHHHHHHT---TSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTT
T ss_pred             ccCCCcHHHHHhhc---ccCCCCHHHHHHHHHHHHHHHHHHh---cCCCceecCCCccceEEEcCCcceeEEeccceeee
Confidence            99999999999765   2346899999999999999999999   888  999999999999999999999999987654


Q ss_pred             CCCCccccceeecCCceeeeecC
Q 026214          216 PEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .....        .++..|+|||
T Consensus       164 ~~~~~--------~~t~~y~aPE  178 (271)
T 3kmu_A          164 QSPGR--------MYAPAWVAPE  178 (271)
T ss_dssp             SCTTC--------BSCGGGSCHH
T ss_pred             cccCc--------cCCccccChh
Confidence            44332        2234577776

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.97  E-value=2.9e-30  Score=221.19  Aligned_cols=170  Identities=15%  Similarity=0.151  Sum_probs=143.3

Q ss_pred             HHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC-cchhhHHHHHHHHHhcCCCceeeEeeEEecC-----C
Q 026214           59 LATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR-DGHGSCINNIVYAAQMSHDHILKLIGCCLET-----P  130 (241)
Q Consensus        59 ~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~  130 (241)
                      ...+.|...+.||+|+||.||+|.+  ++..||+|++..... .....+.+|+.++..++||||+++++++...     .
T Consensus        24 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~  103 (364)
T 3qyz_A           24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMK  103 (364)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCC
T ss_pred             cccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccc
Confidence            3456799999999999999999998  789999999975432 2346789999999999999999999999755     3


Q ss_pred             cceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEcccc
Q 026214          131 IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFS  210 (241)
Q Consensus       131 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG  210 (241)
                      ..+++|||+. ++|.+++...      .+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||
T Consensus       104 ~~~iv~e~~~-~~L~~~l~~~------~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg  173 (364)
T 3qyz_A          104 DVYIVQDLME-TDLYKLLKTQ------HLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFG  173 (364)
T ss_dssp             CEEEEEECCS-EEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCT
T ss_pred             eEEEEEcccC-cCHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChHhEEECCCCCEEEEeCc
Confidence            6899999997 6999999543      4899999999999999999999   9999999999999999999999999999


Q ss_pred             CceecCCCCccccceeecCCceeeeecC
Q 026214          211 LSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       211 ~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ++.................++..|++||
T Consensus       174 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE  201 (364)
T 3qyz_A          174 LARVADPDHDHTGFLTEYVATRWYRAPE  201 (364)
T ss_dssp             TCEECCGGGCBCCTTCCCCSCGGGCCHH
T ss_pred             ceEecCCCCCccccccccccccCCCCCH
Confidence            9998765543333233344566788888

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.97  E-value=4.1e-30  Score=218.87  Aligned_cols=163  Identities=20%  Similarity=0.246  Sum_probs=138.2

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhc-CCCceeeEeeEEecCCcceEEEe
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQM-SHDHILKLIGCCLETPIPILAFE  137 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e  137 (241)
                      .+.|...+.||+|+||.||+|.+  ++..||+|.+.....    ...+|+.++.++ +||||+++++++.+.+..++|||
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E   96 (342)
T 2qr7_A           21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE   96 (342)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred             cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence            45688899999999999999999  789999999976542    345788888888 79999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCC----CcEEEccccCce
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEE----NVAKMFDFSLSI  213 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~----~~~ki~DfG~a~  213 (241)
                      |+++|+|.+.+...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||+...    +.+||+|||++.
T Consensus        97 ~~~gg~L~~~i~~~-----~~~~~~~~~~~~~qi~~al~~lH---~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~  168 (342)
T 2qr7_A           97 LMKGGELLDKILRQ-----KFFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAK  168 (342)
T ss_dssp             CCCSCBHHHHHHTC-----TTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCE
T ss_pred             CCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcc
Confidence            99999999999654     45899999999999999999999   9999999999999998443    359999999999


Q ss_pred             ecCCCCccccceeecCCceeeeecC
Q 026214          214 SIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .+........   ...++..|+|||
T Consensus       169 ~~~~~~~~~~---~~~gt~~y~aPE  190 (342)
T 2qr7_A          169 QLRAENGLLM---TPCYTANFVAPE  190 (342)
T ss_dssp             ECBCTTCCBC---CSSCCSSCCCHH
T ss_pred             cCcCCCCcee---ccCCCccccCHH
Confidence            8765543221   233466788888

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.97  E-value=7.6e-30  Score=216.29  Aligned_cols=167  Identities=15%  Similarity=0.135  Sum_probs=143.5

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC---cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEE
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR---DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA  135 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  135 (241)
                      .+.|...+.||+|+||.||++.+  ++..||+|.+.....   .....+.+|+.+++.++||||+++++++.+.+..+++
T Consensus        40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  119 (335)
T 2owb_A           40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV  119 (335)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence            46688899999999999999999  688999999876432   2346688999999999999999999999999999999


Q ss_pred             EeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceec
Q 026214          136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI  215 (241)
Q Consensus       136 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~  215 (241)
                      |||+.+++|.+++...     ..+++..+..++.|++.||.|||   +.+|+|+||||+|||++.++.+||+|||++..+
T Consensus       120 ~e~~~~~~L~~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~  191 (335)
T 2owb_A          120 LELCRRRSLLELHKRR-----KALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV  191 (335)
T ss_dssp             ECCCTTCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EecCCCCCHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCEecCCCchhEEEcCCCCEEEeeccCceec
Confidence            9999999999998654     35899999999999999999999   999999999999999999999999999999987


Q ss_pred             CCCCccccceeecCCceeeeecC
Q 026214          216 PEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ..+.....   ...++..|++||
T Consensus       192 ~~~~~~~~---~~~gt~~y~aPE  211 (335)
T 2owb_A          192 EYDGERKK---VLCGTPNYIAPE  211 (335)
T ss_dssp             CSTTCCBC---CCCSCCSSCCHH
T ss_pred             ccCccccc---ccCCCccccCHH
Confidence            65433221   223455678887

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=1.3e-30  Score=222.82  Aligned_cols=168  Identities=16%  Similarity=0.132  Sum_probs=142.9

Q ss_pred             hcCCCcCCeeecccceEEEEEEE-----CCeEEEEEEeeccC----CcchhhHHHHHHHHHhc-CCCceeeEeeEEecCC
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW-----QERLISVMRFRESN----RDGHGSCINNIVYAAQM-SHDHILKLIGCCLETP  130 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~  130 (241)
                      .++|...+.||+|+||.||+|.+     ++..||||.+....    ......+.+|+.++..+ +||||+++++++...+
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~  132 (355)
T 1vzo_A           53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET  132 (355)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred             ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence            36788899999999999999998     67899999986532    22345677899999999 6999999999999999


Q ss_pred             cceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEcccc
Q 026214          131 IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFS  210 (241)
Q Consensus       131 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG  210 (241)
                      ..++||||+++++|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||
T Consensus       133 ~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DfG  204 (355)
T 1vzo_A          133 KLHLILDYINGGELFTHLSQR-----ERFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFG  204 (355)
T ss_dssp             EEEEEECCCCSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSS
T ss_pred             eEEEEeecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCcEEEeeCC
Confidence            999999999999999999764     34899999999999999999999   9999999999999999999999999999


Q ss_pred             CceecCCCCccccceeecCCceeeeecC
Q 026214          211 LSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       211 ~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +++.+..+......  ...++..|++||
T Consensus       205 ~a~~~~~~~~~~~~--~~~gt~~y~aPE  230 (355)
T 1vzo_A          205 LSKEFVADETERAY--DFCGTIEYMAPD  230 (355)
T ss_dssp             EEEECCGGGGGGGC--GGGSCCTTCCHH
T ss_pred             CCeecccCCCCccc--CcccCcCccChh
Confidence            99987654433222  223455678887

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.97  E-value=4.3e-30  Score=219.65  Aligned_cols=174  Identities=18%  Similarity=0.184  Sum_probs=138.6

Q ss_pred             CHHHHHHHhcCCCcCCeeecccceEEEEEEE-CCeEEEEEEeeccCCcc-----------hhhHHHHHHHHHhcCCCcee
Q 026214           53 SAQELKLATNNYDQKNVITEDWGCILYKGFW-QERLISVMRFRESNRDG-----------HGSCINNIVYAAQMSHDHIL  120 (241)
Q Consensus        53 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~h~niv  120 (241)
                      ...++....+.|...+.||+|+||.||+|.+ ++..||||++.......           .+.+.+|+.++..++||||+
T Consensus        13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv   92 (362)
T 3pg1_A           13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL   92 (362)
T ss_dssp             HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence            3567788889999999999999999999998 88999999986532211           26789999999999999999


Q ss_pred             eEeeEEec-----CCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCC
Q 026214          121 KLIGCCLE-----TPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH  195 (241)
Q Consensus       121 ~l~~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~N  195 (241)
                      ++++++..     ....++||||+. |+|.+.+...    ...+++..+..++.|++.||.|||   +.+|+|+||||+|
T Consensus        93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~N  164 (362)
T 3pg1_A           93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQ----RIVISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPGN  164 (362)
T ss_dssp             CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCT----TSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGG
T ss_pred             ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHH---HCcCEecCCChHH
Confidence            99999854     335799999998 6999988654    456899999999999999999999   9999999999999


Q ss_pred             eeEcCCCcEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          196 ILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       196 ill~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ||++.++.+||+|||++.....+....    ...++..|+|||
T Consensus       165 Il~~~~~~~kl~Dfg~~~~~~~~~~~~----~~~~t~~y~aPE  203 (362)
T 3pg1_A          165 ILLADNNDITICDFNLAREDTADANKT----HYVTHRWYRAPE  203 (362)
T ss_dssp             EEECTTCCEEECCTTC-------------------CGGGCCHH
T ss_pred             EEEcCCCCEEEEecCcccccccccccc----eecccceecCcH
Confidence            999999999999999998655443222    123345578887

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.97  E-value=5.9e-30  Score=218.02  Aligned_cols=169  Identities=18%  Similarity=0.237  Sum_probs=141.3

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC--cchhhHHHHHHHHHhcCCCceeeEeeEEecC--------
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR--DGHGSCINNIVYAAQMSHDHILKLIGCCLET--------  129 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--------  129 (241)
                      ++|...+.||+|+||.||+|.+  ++..||+|++.....  .....+.+|+.++..++||||+++++++...        
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   96 (351)
T 3mi9_A           17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK   96 (351)
T ss_dssp             GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred             cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence            5688899999999999999999  789999999865432  2345788999999999999999999999773        


Q ss_pred             CcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccc
Q 026214          130 PIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDF  209 (241)
Q Consensus       130 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~Df  209 (241)
                      +..++||||+. ++|.+.+...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+||
T Consensus        97 ~~~~lv~e~~~-~~l~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~Df  168 (351)
T 3mi9_A           97 GSIYLVFDFCE-HDLAGLLSNV----LVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADF  168 (351)
T ss_dssp             CEEEEEEECCS-EEHHHHHHCT----TSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCC
T ss_pred             ceEEEEEeccC-CCHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCCEEEccc
Confidence            46899999998 5888888654    345999999999999999999999   999999999999999999999999999


Q ss_pred             cCceecCCCCccc-cceeecCCceeeeecC
Q 026214          210 SLSISIPEGGTSG-AKCLKSERTEICCVRE  238 (241)
Q Consensus       210 G~a~~~~~~~~~~-~~~~~~~~~~~~~~~e  238 (241)
                      |+|+.+....... .......++..|+|||
T Consensus       169 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE  198 (351)
T 3mi9_A          169 GLARAFSLAKNSQPNRYTNRVVTLWYRPPE  198 (351)
T ss_dssp             TTCEECCCCSSSSCCCCCSSCSCGGGCCHH
T ss_pred             hhcccccccccccccccCCcccccCccCch
Confidence            9999876443322 2222334566788888

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.96  E-value=4.5e-30  Score=222.99  Aligned_cols=162  Identities=16%  Similarity=0.261  Sum_probs=129.2

Q ss_pred             cCCCcC-CeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhc-CCCceeeEeeEEec----CCcce
Q 026214           62 NNYDQK-NVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQM-SHDHILKLIGCCLE----TPIPI  133 (241)
Q Consensus        62 ~~~~~~-~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~----~~~~~  133 (241)
                      +.|... +.||+|+||.||+|.+  ++..||||++...     ..+.+|+.++.++ +||||+++++++..    ....+
T Consensus        61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~  135 (400)
T 1nxk_A           61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL  135 (400)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence            345443 6899999999999999  7899999998632     4577888887554 89999999998865    56789


Q ss_pred             EEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcC---CCcEEEcccc
Q 026214          134 LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNE---ENVAKMFDFS  210 (241)
Q Consensus       134 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~---~~~~ki~DfG  210 (241)
                      +||||+++|+|.+++...   ....+++..+..++.|++.||.|||   +.+|+||||||+|||++.   ++.+||+|||
T Consensus       136 lv~E~~~gg~L~~~l~~~---~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG  209 (400)
T 1nxk_A          136 IVMECLDGGELFSRIQDR---GDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFG  209 (400)
T ss_dssp             EEEECCCSEEHHHHHHCC------CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSTTCCEEECCCT
T ss_pred             EEEEeCCCCcHHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCcceEEEecCCCCccEEEEecc
Confidence            999999999999999764   2346899999999999999999999   999999999999999987   7899999999


Q ss_pred             CceecCCCCccccceeecCCceeeeecC
Q 026214          211 LSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       211 ~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +++.........    ...++..|++||
T Consensus       210 ~a~~~~~~~~~~----~~~gt~~y~aPE  233 (400)
T 1nxk_A          210 FAKETTSHNSLT----TPCYTPYYVAPE  233 (400)
T ss_dssp             TCEECC---------------CTTCCGG
T ss_pred             cccccCCCCccc----cCCCCCCccCHh
Confidence            999776543322    223456688888

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.96  E-value=5e-30  Score=235.98  Aligned_cols=169  Identities=18%  Similarity=0.184  Sum_probs=144.3

Q ss_pred             HHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeecc---CCcchhhHHHHHHHHHhc-CCCceeeEeeEEecCCcc
Q 026214           59 LATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRES---NRDGHGSCINNIVYAAQM-SHDHILKLIGCCLETPIP  132 (241)
Q Consensus        59 ~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~  132 (241)
                      ...++|...+.||+|+||.||+|.+  ++..||||++...   .......+..|..++..+ +||+|+++++++.+.+..
T Consensus       338 ~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~  417 (674)
T 3pfq_A          338 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL  417 (674)
T ss_dssp             --CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEE
T ss_pred             ccccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEE
Confidence            3457788899999999999999999  7889999999753   223456788999999988 799999999999999999


Q ss_pred             eEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCc
Q 026214          133 ILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS  212 (241)
Q Consensus       133 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a  212 (241)
                      |+||||+++|+|.+++...     ..+++..+..++.||+.||.|||   +.+|+||||||+||||+.++.+||+|||+|
T Consensus       418 ~lV~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~gIiHrDLKp~NILl~~~g~ikL~DFGla  489 (674)
T 3pfq_A          418 YFVMEYVNGGDLMYHIQQV-----GRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMC  489 (674)
T ss_dssp             EEEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTSEECCCCCSTTEEECSSSCEEECCCTTC
T ss_pred             EEEEeCcCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEeccCChhhEEEcCCCcEEEeeccee
Confidence            9999999999999999765     35899999999999999999999   999999999999999999999999999999


Q ss_pred             eecCCCCccccceeecCCceeeeecC
Q 026214          213 ISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +....+.....   ...++..|+|||
T Consensus       490 ~~~~~~~~~~~---~~~GT~~Y~APE  512 (674)
T 3pfq_A          490 KENIWDGVTTK---TFCGTPDYIAPE  512 (674)
T ss_dssp             EECCCTTCCBC---CCCSCSSSCCHH
T ss_pred             eccccCCcccc---cccCCCcccCHh
Confidence            97554433221   223566788888

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.96  E-value=4.1e-30  Score=212.15  Aligned_cols=165  Identities=15%  Similarity=0.208  Sum_probs=138.5

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEE
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA  135 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  135 (241)
                      .++|...+.||+|+||.||+|.+  ++..||+|.+....   ......+.+|+.+++.++||||+++++++.+.+..+++
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   87 (279)
T 3fdn_A            8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI   87 (279)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence            46688899999999999999998  77889999986532   12346688999999999999999999999999999999


Q ss_pred             EeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceec
Q 026214          136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI  215 (241)
Q Consensus       136 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~  215 (241)
                      |||+++++|.+++...     ..+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.++|+|||++...
T Consensus        88 ~e~~~~~~l~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~  159 (279)
T 3fdn_A           88 LEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHA  159 (279)
T ss_dssp             ECCCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---TTTCEECCCCGGGEEECTTSCEEECSCCEESCC
T ss_pred             EecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHhEEEcCCCCEEEEeccccccC
Confidence            9999999999999664     34899999999999999999999   999999999999999999999999999998665


Q ss_pred             CCCCccccceeecCCceeeeecC
Q 026214          216 PEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ......     ...++..|++||
T Consensus       160 ~~~~~~-----~~~~~~~y~aPE  177 (279)
T 3fdn_A          160 PSSRRT-----DLCGTLDYLPPE  177 (279)
T ss_dssp             -------------CCCCTTCCHH
T ss_pred             Cccccc-----ccCCCCCccCHh
Confidence            443221     123455677777

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.96  E-value=4.3e-30  Score=214.98  Aligned_cols=177  Identities=15%  Similarity=0.219  Sum_probs=145.6

Q ss_pred             HHHhcCCCcCCeeecccceEEEEEEE-------CCeEEEEEEeeccCC-cchhhHHHHHHHHHhc-CCCceeeEeeEEec
Q 026214           58 KLATNNYDQKNVITEDWGCILYKGFW-------QERLISVMRFRESNR-DGHGSCINNIVYAAQM-SHDHILKLIGCCLE  128 (241)
Q Consensus        58 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~  128 (241)
                      ....++|...+.||+|+||.||+|.+       ++..||+|.+..... ...+.+.+|+.++.++ +||||+++++++..
T Consensus        19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~   98 (313)
T 1t46_A           19 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI   98 (313)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             ccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEec
Confidence            34456788899999999999999985       467899999976542 2346789999999999 99999999999999


Q ss_pred             CCcceEEEeeCCCCCHHHHHhhcCCC-------------CCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCC
Q 026214          129 TPIPILAFESVEYGNLRDRILSASQP-------------QTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH  195 (241)
Q Consensus       129 ~~~~~lv~e~~~~gsL~~~l~~~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~N  195 (241)
                      ++..++||||+++|+|.+++......             ....+++..+..++.|++.||.|||   +.+++|+||||+|
T Consensus        99 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~N  175 (313)
T 1t46_A           99 GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARN  175 (313)
T ss_dssp             SSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGG
T ss_pred             CCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccce
Confidence            99999999999999999999775210             1235899999999999999999999   9999999999999


Q ss_pred             eeEcCCCcEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          196 ILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       196 ill~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |+++.++.+||+|||++..+..+..... ......+..|++||
T Consensus       176 il~~~~~~~kl~Dfg~~~~~~~~~~~~~-~~~~~~~~~y~aPE  217 (313)
T 1t46_A          176 ILLTHGRITKICDFGLARDIKNDSNYVV-KGNARLPVKWMAPE  217 (313)
T ss_dssp             EEEETTTEEEECCCGGGSCTTSCTTSEE-CSSSEECGGGCCHH
T ss_pred             EEEcCCCCEEEcccccccccccccccee-ccCCCCcceeeChH
Confidence            9999999999999999998766543211 11112234578887

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.96  E-value=2.4e-30  Score=219.80  Aligned_cols=168  Identities=15%  Similarity=0.137  Sum_probs=144.1

Q ss_pred             hcCCCcCCeeecccceEEEEEEECCeEEEEEEeeccCCcc---h--------------hhHHHHHHHHHhcCCCceeeEe
Q 026214           61 TNNYDQKNVITEDWGCILYKGFWQERLISVMRFRESNRDG---H--------------GSCINNIVYAAQMSHDHILKLI  123 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~---~--------------~~~~~E~~~l~~l~h~niv~l~  123 (241)
                      .++|...+.||+|+||.||+|.+++..||+|.+.......   .              ..+.+|+.++..++||||++++
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~  109 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCE  109 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEEEEETTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCS
T ss_pred             cCceEEEEEEcCCCCeEEEEEEcCCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEE
Confidence            4678889999999999999999999999999987542111   1              7799999999999999999999


Q ss_pred             eEEecCCcceEEEeeCCCCCHHHH------HhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCC-CCeEEccCCCCCe
Q 026214          124 GCCLETPIPILAFESVEYGNLRDR------ILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFP-RPIVYRDFKTAHI  196 (241)
Q Consensus       124 ~~~~~~~~~~lv~e~~~~gsL~~~------l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~-~~ivH~dlk~~Ni  196 (241)
                      +++...+..++||||+++++|.++      +...   ....+++..+..++.|++.||.|||   + .+++|+||+|+||
T Consensus       110 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dl~p~Ni  183 (348)
T 2pml_X          110 GIITNYDEVYIIYEYMENDSILKFDEYFFVLDKN---YTCFIPIQVIKCIIKSVLNSFSYIH---NEKNICHRDVKPSNI  183 (348)
T ss_dssp             EEEESSSEEEEEEECCTTCBSSEESSSEESSCSS---SCCCCCHHHHHHHHHHHHHHHHHHH---HTSCEECCCCCGGGE
T ss_pred             EEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhc---cccCCCHHHHHHHHHHHHHHHHHHh---ccCCEeecCCChHhE
Confidence            999999999999999999999998      5332   2467999999999999999999999   8 9999999999999


Q ss_pred             eEcCCCcEEEccccCceecCCCCccccceeecCCceeeeecCC
Q 026214          197 LFNEENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVREN  239 (241)
Q Consensus       197 ll~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e~  239 (241)
                      +++.++.++|+|||++.......     .....++..|++||-
T Consensus       184 l~~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~~y~aPE~  221 (348)
T 2pml_X          184 LMDKNGRVKLSDFGESEYMVDKK-----IKGSRGTYEFMPPEF  221 (348)
T ss_dssp             EECTTSCEEECCCTTCEECBTTE-----ECSSCSCGGGCCGGG
T ss_pred             EEcCCCcEEEecccccccccccc-----ccCCCCCcCccCchh
Confidence            99999999999999999875541     122335566788873

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.96  E-value=2.7e-30  Score=236.28  Aligned_cols=162  Identities=17%  Similarity=0.239  Sum_probs=132.1

Q ss_pred             CeeecccceEEEEEEE----CCeEEEEEEeeccCC--cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCCC
Q 026214           68 NVITEDWGCILYKGFW----QERLISVMRFRESNR--DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEY  141 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~----~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~  141 (241)
                      +.||+|+||.||+|.+    ++..||||+++....  ...+.+.+|+.++..++||||+++++++.. +..++||||+++
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~  453 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL  453 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence            4799999999999976    457899999976432  235679999999999999999999999964 558899999999


Q ss_pred             CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCcc
Q 026214          142 GNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTS  221 (241)
Q Consensus       142 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~  221 (241)
                      |+|.+++...     ..+++..+..++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+|+.+..+...
T Consensus       454 g~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~yLH---~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~  525 (635)
T 4fl3_A          454 GPLNKYLQQN-----RHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY  525 (635)
T ss_dssp             EEHHHHHHHC-----TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----
T ss_pred             CCHHHHHhhC-----CCCCHHHHHHHHHHHHHHHHHHH---HCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccc
Confidence            9999999654     45899999999999999999999   999999999999999999999999999999988766544


Q ss_pred             ccceeecCCceeeeecC
Q 026214          222 GAKCLKSERTEICCVRE  238 (241)
Q Consensus       222 ~~~~~~~~~~~~~~~~e  238 (241)
                      ......+..+..|+|||
T Consensus       526 ~~~~~~~~~t~~y~APE  542 (635)
T 4fl3_A          526 YKAQTHGKWPVKWYAPE  542 (635)
T ss_dssp             ---------CGGGSCHH
T ss_pred             cccccCCCCceeeeChh
Confidence            44344444555688887

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.96  E-value=1.2e-29  Score=209.98  Aligned_cols=163  Identities=21%  Similarity=0.334  Sum_probs=136.7

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcc-------hhhHHHHHHHHHhcCCCceeeEeeEEecCCc
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDG-------HGSCINNIVYAAQMSHDHILKLIGCCLETPI  131 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  131 (241)
                      .++|...+.||+|+||.||+|.+  ++..||+|.+.......       .+.+.+|+.++..++||||+++++++.... 
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-   96 (287)
T 4f0f_A           18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-   96 (287)
T ss_dssp             STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred             hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence            36688899999999999999999  88999999986543222       267899999999999999999999986554 


Q ss_pred             ceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCC--eEEccCCCCCeeEcCCCc-----E
Q 026214          132 PILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRP--IVYRDFKTAHILFNEENV-----A  204 (241)
Q Consensus       132 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~--ivH~dlk~~Nill~~~~~-----~  204 (241)
                       +++|||+++++|.+.+...    ...+++..+..++.|++.||.|||   +.+  ++|+||||+|||++.++.     +
T Consensus        97 -~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~ivH~dikp~Nil~~~~~~~~~~~~  168 (287)
T 4f0f_A           97 -RMVMEFVPCGDLYHRLLDK----AHPIKWSVKLRLMLDIALGIEYMQ---NQNPPIVHRDLRSPNIFLQSLDENAPVCA  168 (287)
T ss_dssp             -EEEEECCTTCBHHHHHHCT----TSCCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCSCCSGGGEEESCCCTTCSCCE
T ss_pred             -eEEEEecCCCCHHHHHhcc----cCCccHHHHHHHHHHHHHHHHHHH---hCCCCeecCCCCcceEEEeccCCCCceeE
Confidence             7999999999999988664    456999999999999999999999   888  999999999999987776     9


Q ss_pred             EEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          205 KMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       205 ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ||+|||+++......      ....++..|++||
T Consensus       169 kl~Dfg~~~~~~~~~------~~~~g~~~y~aPE  196 (287)
T 4f0f_A          169 KVADFGLSQQSVHSV------SGLLGNFQWMAPE  196 (287)
T ss_dssp             EECCCTTCBCCSSCE------ECCCCCCTTSCGG
T ss_pred             EeCCCCccccccccc------cccCCCccccCch
Confidence            999999998554432      1223455677887

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.96  E-value=2.3e-30  Score=229.77  Aligned_cols=165  Identities=19%  Similarity=0.222  Sum_probs=143.4

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      +.|...+.||+|+||.||+|.+  ++..||||++....   ......+.+|+.+++.++||||+++++++...+..++||
T Consensus        26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  105 (484)
T 3nyv_A           26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG  105 (484)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence            4588899999999999999999  88999999987543   234567899999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeE---cCCCcEEEccccCce
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILF---NEENVAKMFDFSLSI  213 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill---~~~~~~ki~DfG~a~  213 (241)
                      ||+.+++|.+.+...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||+   +.++.+||+|||+|.
T Consensus       106 e~~~~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~  177 (484)
T 3nyv_A          106 EVYTGGELFDEIISR-----KRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLST  177 (484)
T ss_dssp             CCCCSCBHHHHHHTC-----SCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHH
T ss_pred             ecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeE
Confidence            999999999999654     45899999999999999999999   9999999999999999   567899999999999


Q ss_pred             ecCCCCccccceeecCCceeeeecC
Q 026214          214 SIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .+........    ..++..|+|||
T Consensus       178 ~~~~~~~~~~----~~gt~~y~aPE  198 (484)
T 3nyv_A          178 HFEASKKMKD----KIGTAYYIAPE  198 (484)
T ss_dssp             HBCCCCSHHH----HTTGGGTCCHH
T ss_pred             Eccccccccc----CCCCccccCce
Confidence            8766543222    23556788887

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.96  E-value=1.1e-29  Score=209.69  Aligned_cols=165  Identities=18%  Similarity=0.209  Sum_probs=139.1

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCc------chhhHHHHHHHHHhcCCCceeeEeeEEecCCcce
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRD------GHGSCINNIVYAAQMSHDHILKLIGCCLETPIPI  133 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  133 (241)
                      ++|...+.||+|+||.||+|.+  ++..||+|.+......      ..+.+.+|+.++..++||||+++++++...+..+
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV   84 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence            4588889999999999999999  7899999998764321      3567899999999999999999999999999999


Q ss_pred             EEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCC----cEEEccc
Q 026214          134 LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEEN----VAKMFDF  209 (241)
Q Consensus       134 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~----~~ki~Df  209 (241)
                      ++|||+++++|.+++...     ..+++..+..++.|++.||.|||   +.+++|+||||+||+++.++    .++|+||
T Consensus        85 lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~~~~kl~df  156 (283)
T 3bhy_A           85 LILELVSGGELFDFLAEK-----ESLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDF  156 (283)
T ss_dssp             EEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSSSSCCEEECCC
T ss_pred             EEEeecCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChHHEEEecCCCCCCceEEEec
Confidence            999999999999999654     35899999999999999999999   99999999999999998876    8999999


Q ss_pred             cCceecCCCCccccceeecCCceeeeecC
Q 026214          210 SLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       210 G~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |++..+.......    ...++..|++||
T Consensus       157 g~~~~~~~~~~~~----~~~~~~~y~aPE  181 (283)
T 3bhy_A          157 GIAHKIEAGNEFK----NIFGTPEFVAPE  181 (283)
T ss_dssp             TTCEECC------------CCCGGGCCHH
T ss_pred             ccceeccCCCccc----ccCCCcCccCcc
Confidence            9999876543221    223455677887

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.96  E-value=6.3e-30  Score=220.61  Aligned_cols=168  Identities=16%  Similarity=0.172  Sum_probs=135.6

Q ss_pred             HHHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecC------
Q 026214           58 KLATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLET------  129 (241)
Q Consensus        58 ~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------  129 (241)
                      ....++|...+.||+|+||.||+|.+  ++..||+|++....    ....+|+.+++.++||||+++++++...      
T Consensus         3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~   78 (383)
T 3eb0_A            3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP----RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK   78 (383)
T ss_dssp             ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred             ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence            45567899999999999999999998  88999999987653    2234799999999999999999998543      


Q ss_pred             --------------------------------CcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 026214          130 --------------------------------PIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAY  177 (241)
Q Consensus       130 --------------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~  177 (241)
                                                      ...++||||++ ++|.+.+..... ....+++..+..++.|++.||.|
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~aL~~  156 (383)
T 3eb0_A           79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIR-SGRSIPMNLISIYIYQLFRAVGF  156 (383)
T ss_dssp             -------------------------------CCEEEEEECCCS-EEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHH
Confidence                                            34889999998 588888764211 24569999999999999999999


Q ss_pred             HhCCCCCCeEEccCCCCCeeEc-CCCcEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          178 LHFGFPRPIVYRDFKTAHILFN-EENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       178 lH~~~~~~ivH~dlk~~Nill~-~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ||   +.+|+||||||+|||++ .++.+||+|||+|+.+.......    ...++..|+|||
T Consensus       157 LH---~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~----~~~~t~~y~aPE  211 (383)
T 3eb0_A          157 IH---SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSV----AYICSRFYRAPE  211 (383)
T ss_dssp             HH---TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCC----CCCCCSSCCCHH
T ss_pred             HH---HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCc----CcccCCCccCHH
Confidence            99   99999999999999998 68999999999999876554332    223355688887

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.96  E-value=4.5e-30  Score=215.19  Aligned_cols=165  Identities=20%  Similarity=0.332  Sum_probs=130.9

Q ss_pred             cCCCcCCeeecccceEEEEEEECCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCCC
Q 026214           62 NNYDQKNVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEY  141 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~  141 (241)
                      ++|...+.||+|+||.||++.+.+..||+|.+...  ...+.+.+|+.++++++||||+++++++.  +..++||||+++
T Consensus         8 ~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~~   83 (307)
T 2eva_A            8 KEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEG   83 (307)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEETTEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCTT
T ss_pred             hHeeeeeEeecCCCceEEEEEECCeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCCC
Confidence            45777899999999999999999999999998654  34577999999999999999999999886  458999999999


Q ss_pred             CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCc-EEEccccCceecCCCCc
Q 026214          142 GNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENV-AKMFDFSLSISIPEGGT  220 (241)
Q Consensus       142 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~-~ki~DfG~a~~~~~~~~  220 (241)
                      ++|.+++....  ....+++..++.++.|++.||.|||+....+|+||||||+|||++.++. +||+|||++..+.....
T Consensus        84 ~~L~~~l~~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~  161 (307)
T 2eva_A           84 GSLYNVLHGAE--PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMT  161 (307)
T ss_dssp             CBHHHHHHCSS--SEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---------
T ss_pred             CCHHHHHhccC--CCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccccc
Confidence            99999997652  2335788999999999999999999321289999999999999988876 89999999986654322


Q ss_pred             cccceeecCCceeeeecC
Q 026214          221 SGAKCLKSERTEICCVRE  238 (241)
Q Consensus       221 ~~~~~~~~~~~~~~~~~e  238 (241)
                      .      ..++..|++||
T Consensus       162 ~------~~gt~~y~aPE  173 (307)
T 2eva_A          162 N------NKGSAAWMAPE  173 (307)
T ss_dssp             ---------CCTTSSCHH
T ss_pred             c------CCCCCceEChh
Confidence            1      12445677777

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.96  E-value=1.9e-29  Score=216.47  Aligned_cols=169  Identities=22%  Similarity=0.277  Sum_probs=144.7

Q ss_pred             HHHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCc--------chhhHHHHHHHHHhc-CCCceeeEeeEE
Q 026214           58 KLATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRD--------GHGSCINNIVYAAQM-SHDHILKLIGCC  126 (241)
Q Consensus        58 ~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l-~h~niv~l~~~~  126 (241)
                      ....++|...+.||+|+||.||+|.+  ++..||||.+......        ..+.+.+|+.++..+ +||||+++++++
T Consensus        90 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~  169 (365)
T 2y7j_A           90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY  169 (365)
T ss_dssp             HHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred             hhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEE
Confidence            33446788889999999999999998  7899999998765321        134678899999999 899999999999


Q ss_pred             ecCCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEE
Q 026214          127 LETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKM  206 (241)
Q Consensus       127 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki  206 (241)
                      ...+..++||||+++++|.+++...     ..+++..+..++.|++.||.|||   +.+++|+||||+|||++.++.++|
T Consensus       170 ~~~~~~~lv~e~~~g~~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~~LH---~~gi~H~Dlkp~NIl~~~~~~ikl  241 (365)
T 2y7j_A          170 ESSSFMFLVFDLMRKGELFDYLTEK-----VALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRL  241 (365)
T ss_dssp             EBSSEEEEEECCCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEE
T ss_pred             eeCCEEEEEEEeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEE
Confidence            9999999999999999999999654     35899999999999999999999   999999999999999999999999


Q ss_pred             ccccCceecCCCCccccceeecCCceeeeecC
Q 026214          207 FDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       207 ~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +|||++..+.......    ...++..|++||
T Consensus       242 ~DfG~~~~~~~~~~~~----~~~gt~~y~aPE  269 (365)
T 2y7j_A          242 SDFGFSCHLEPGEKLR----ELCGTPGYLAPE  269 (365)
T ss_dssp             CCCTTCEECCTTCCBC----CCCSCGGGCCHH
T ss_pred             EecCcccccCCCcccc----cCCCCCCccChh
Confidence            9999999887654322    223455678887

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.96  E-value=7.6e-30  Score=226.66  Aligned_cols=166  Identities=17%  Similarity=0.226  Sum_probs=142.1

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeecc--CCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRES--NRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      .+.|...+.||+|+||.||+|.+  ++..||+|++...  .......+.+|+.+++.++||||+++++++......++||
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  100 (486)
T 3mwu_A           21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG  100 (486)
T ss_dssp             HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence            35588899999999999999999  7899999998753  2334677899999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEc---CCCcEEEccccCce
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFN---EENVAKMFDFSLSI  213 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~---~~~~~ki~DfG~a~  213 (241)
                      ||+.+++|.+.+...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++   .++.+||+|||+|.
T Consensus       101 e~~~~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~  172 (486)
T 3mwu_A          101 ELYTGGELFDEIIKR-----KRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLST  172 (486)
T ss_dssp             CCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTT
T ss_pred             EcCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEEECCcCe
Confidence            999999999998665     35899999999999999999999   99999999999999995   45679999999998


Q ss_pred             ecCCCCccccceeecCCceeeeecC
Q 026214          214 SIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .+.......    ...++..|+|||
T Consensus       173 ~~~~~~~~~----~~~gt~~y~aPE  193 (486)
T 3mwu_A          173 CFQQNTKMK----DRIGTAYYIAPE  193 (486)
T ss_dssp             TBCCC--------CCTTGGGGCCGG
T ss_pred             ECCCCCccC----CCcCCCCCCCHH
Confidence            776543221    233566788888

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=2.6e-30  Score=222.06  Aligned_cols=162  Identities=14%  Similarity=0.125  Sum_probs=132.6

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC--cchhhHHHHHHHHHhcCCCceeeEeeEEecCC------
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR--DGHGSCINNIVYAAQMSHDHILKLIGCCLETP------  130 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------  130 (241)
                      .+.|...+.||+|+||.||+|.+  ++..||||++.....  ...+.+.+|+.+++.++||||+++++++....      
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  103 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT  103 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence            46788899999999999999998  789999999865322  23467899999999999999999999997653      


Q ss_pred             cceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEcccc
Q 026214          131 IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFS  210 (241)
Q Consensus       131 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG  210 (241)
                      ..++||||+ +++|.+++...      .+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||
T Consensus       104 ~~~lv~e~~-~~~L~~~~~~~------~l~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg  173 (367)
T 1cm8_A          104 DFYLVMPFM-GTDLGKLMKHE------KLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFG  173 (367)
T ss_dssp             CCEEEEECC-SEEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCT
T ss_pred             eEEEEEecC-CCCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCHHHEEEcCCCCEEEEeee
Confidence            459999999 68999999553      4899999999999999999999   9999999999999999999999999999


Q ss_pred             CceecCCCCccccceeecCCceeeeecC
Q 026214          211 LSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       211 ~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +++......+      ....+.+|+|||
T Consensus       174 ~a~~~~~~~~------~~~~t~~y~aPE  195 (367)
T 1cm8_A          174 LARQADSEMT------GYVVTRWYRAPE  195 (367)
T ss_dssp             TCEECCSSCC------SSCSCGGGCCTH
T ss_pred             cccccccccC------cCcCCCCcCCHH
Confidence            9998754322      123456788887

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.96  E-value=2.4e-29  Score=213.03  Aligned_cols=178  Identities=18%  Similarity=0.198  Sum_probs=146.3

Q ss_pred             cCHHHHHHHhcCCCcCCeeecccceEEEEEEECCeEEEEEEeeccCCcchhhHHHHHHHHHh--cCCCceeeEeeEEecC
Q 026214           52 FSAQELKLATNNYDQKNVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQ--MSHDHILKLIGCCLET  129 (241)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~  129 (241)
                      .+..--....++|...+.||+|+||.||+|.+++..||+|.+...   ....+.+|.+++..  ++||||+++++++...
T Consensus        32 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~  108 (342)
T 1b6c_B           32 LPLLVQRTIARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKD  108 (342)
T ss_dssp             SCHHHHHHHHHHCEEEEEEEEETTEEEEEEEETTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECC
T ss_pred             CceeecccccccEEEEeeecCCCCcEEEEEEEcCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeeccc
Confidence            344444455678999999999999999999999999999998654   34567889998887  7999999999999887


Q ss_pred             C----cceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCC-----CCCeEEccCCCCCeeEcC
Q 026214          130 P----IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGF-----PRPIVYRDFKTAHILFNE  200 (241)
Q Consensus       130 ~----~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~-----~~~ivH~dlk~~Nill~~  200 (241)
                      .    ..++||||+++|+|.+++...      .+++..+..++.|++.||.|||...     +.+|+|+||||+|||++.
T Consensus       109 ~~~~~~~~lv~e~~~~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~  182 (342)
T 1b6c_B          109 NGTWTQLWLVSDYHEHGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKK  182 (342)
T ss_dssp             CSSCCCEEEEECCCTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECT
T ss_pred             CCccceeEEEEeecCCCcHHHHHhcc------CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECC
Confidence            6    789999999999999999553      4899999999999999999999321     468999999999999999


Q ss_pred             CCcEEEccccCceecCCCCcccc-ceeecCCceeeeecC
Q 026214          201 ENVAKMFDFSLSISIPEGGTSGA-KCLKSERTEICCVRE  238 (241)
Q Consensus       201 ~~~~ki~DfG~a~~~~~~~~~~~-~~~~~~~~~~~~~~e  238 (241)
                      ++.+||+|||++........... ......++..|+|||
T Consensus       183 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  221 (342)
T 1b6c_B          183 NGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE  221 (342)
T ss_dssp             TSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHH
T ss_pred             CCCEEEEECCCceeccccccccccccccCCcCcccCCHh
Confidence            99999999999998766543321 112234556788887

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.96  E-value=3.4e-30  Score=217.88  Aligned_cols=166  Identities=22%  Similarity=0.263  Sum_probs=133.0

Q ss_pred             hcCCCcCCeeecccceEEEEEEECCeEEEEEEeeccCCcchhhHHHHHHH--HHhcCCCceeeEeeEEec-----CCcce
Q 026214           61 TNNYDQKNVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVY--AAQMSHDHILKLIGCCLE-----TPIPI  133 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~--l~~l~h~niv~l~~~~~~-----~~~~~  133 (241)
                      .++|...+.||+|+||.||+|.+++..||+|++....   ...+..|..+  +..++||||+++++.+..     ....+
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~   88 (336)
T 3g2f_A           12 LDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYL   88 (336)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEETTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEE
T ss_pred             hHHhheeeecccCCCeEEEEEEECCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEE
Confidence            4678889999999999999999999999999987543   3344455544  445899999999986532     23568


Q ss_pred             EEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCC---------CeEEccCCCCCeeEcCCCcE
Q 026214          134 LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPR---------PIVYRDFKTAHILFNEENVA  204 (241)
Q Consensus       134 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~---------~ivH~dlk~~Nill~~~~~~  204 (241)
                      +||||+++|+|.+++...      ..++..+..++.|++.||.|||   +.         +|+||||||+|||++.++.+
T Consensus        89 lv~e~~~~g~L~~~l~~~------~~~~~~~~~i~~qi~~~L~~LH---~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~  159 (336)
T 3g2f_A           89 LVMEYYPNGSLXKYLSLH------TSDWVSSCRLAHSVTRGLAYLH---TELPRGDHYKPAISHRDLNSRNVLVKNDGTC  159 (336)
T ss_dssp             EEECCCTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHH---CCBCCGGGCBCCEECSSCSGGGEEECTTSCE
T ss_pred             EEEecCCCCcHHHHHhhc------ccchhHHHHHHHHHHHHHHHHH---hhhccccccccceeecccccceEEEcCCCcE
Confidence            999999999999999654      3588899999999999999999   88         99999999999999999999


Q ss_pred             EEccccCceecCCCCcc-----ccceeecCCceeeeecC
Q 026214          205 KMFDFSLSISIPEGGTS-----GAKCLKSERTEICCVRE  238 (241)
Q Consensus       205 ki~DfG~a~~~~~~~~~-----~~~~~~~~~~~~~~~~e  238 (241)
                      ||+|||+|..+..+...     ........++..|+|||
T Consensus       160 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  198 (336)
T 3g2f_A          160 VISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPE  198 (336)
T ss_dssp             EECCCTTCEECSSSSCC---------CCTTSCGGGCCHH
T ss_pred             EEeeccceeecccccccCccccccccccCCCccceeCch
Confidence            99999999987654321     11122334667788888

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.96  E-value=1.1e-29  Score=212.83  Aligned_cols=167  Identities=20%  Similarity=0.240  Sum_probs=138.9

Q ss_pred             HhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEe
Q 026214           60 ATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFE  137 (241)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  137 (241)
                      ..+.|...+.||+|+||.||+|.+  ++..||+|.+....  ....+.+|+.++..++||||+++++++...+..+++||
T Consensus        27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (314)
T 3com_A           27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME  104 (314)
T ss_dssp             ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence            446788899999999999999999  68999999997653  45778999999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCC
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE  217 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~  217 (241)
                      |+++++|.+++...    ...+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++..+..
T Consensus       105 ~~~~~~L~~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~  177 (314)
T 3com_A          105 YCGAGSVSDIIRLR----NKTLTEDEIATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTD  177 (314)
T ss_dssp             CCTTEEHHHHHHHH----TCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECBT
T ss_pred             cCCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCcCHHHEEECCCCCEEEeecccchhhhh
Confidence            99999999999644    346899999999999999999999   99999999999999999999999999999988765


Q ss_pred             CCccccceeecCCceeeeecC
Q 026214          218 GGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ......   ...++..|.+||
T Consensus       178 ~~~~~~---~~~~~~~y~aPE  195 (314)
T 3com_A          178 TMAKRN---TVIGTPFWMAPE  195 (314)
T ss_dssp             TBSCBC---CCCSCGGGCCHH
T ss_pred             hccccC---ccCCCCCccChh
Confidence            432211   223445677887

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=5.4e-30  Score=212.93  Aligned_cols=168  Identities=17%  Similarity=0.212  Sum_probs=137.8

Q ss_pred             CCcCCeeecccceEEEEEEE--CC---eEEEEEEeeccCC-cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcc-eEEE
Q 026214           64 YDQKNVITEDWGCILYKGFW--QE---RLISVMRFRESNR-DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIP-ILAF  136 (241)
Q Consensus        64 ~~~~~~lg~G~~g~Vy~~~~--~~---~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-~lv~  136 (241)
                      |...++||+|+||.||+|.+  ++   ..||+|.+..... ...+.+.+|+.+++.++||||+++++++...+.. ++++
T Consensus        23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~  102 (298)
T 3pls_A           23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL  102 (298)
T ss_dssp             EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred             EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEE
Confidence            44568999999999999987  22   3799999876432 2346789999999999999999999999876654 9999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||+.+++|.+++...    ...+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.+||+|||++..+.
T Consensus       103 e~~~~~~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~  175 (298)
T 3pls_A          103 PYMCHGDLLQFIRSP----QRNPTVKDLISFGLQVARGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLARDIL  175 (298)
T ss_dssp             CCCTTCBHHHHHHCT----TCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTT
T ss_pred             ecccCCCHHHHHhcc----ccCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEeCcCCCccccc
Confidence            999999999999664    456899999999999999999999   9999999999999999999999999999998775


Q ss_pred             CCCcc-ccceeecCCceeeeecC
Q 026214          217 EGGTS-GAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~-~~~~~~~~~~~~~~~~e  238 (241)
                      ..... .........+..|.+||
T Consensus       176 ~~~~~~~~~~~~~~~~~~y~aPE  198 (298)
T 3pls_A          176 DREYYSVQQHRHARLPVKWTALE  198 (298)
T ss_dssp             TGGGGCSCCSSCTTCGGGGSCHH
T ss_pred             CCcccccccCcCCCCCccccChh
Confidence            54322 12222334455677777

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.96  E-value=1.5e-30  Score=216.92  Aligned_cols=169  Identities=18%  Similarity=0.166  Sum_probs=139.0

Q ss_pred             HhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEe
Q 026214           60 ATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFE  137 (241)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  137 (241)
                      ..+.|...+.||+|+||.||+|.+  ++..||+|.+..........+.+|+.++..++||||+++++++...+..++|||
T Consensus        17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   96 (302)
T 2j7t_A           17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE   96 (302)
T ss_dssp             GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred             CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence            346688889999999999999999  689999999987665667889999999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCC
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE  217 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~  217 (241)
                      |+++++|.+++...    ...+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.+||+|||++.....
T Consensus        97 ~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  169 (302)
T 2j7t_A           97 FCPGGAVDAIMLEL----DRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLK  169 (302)
T ss_dssp             CCTTEEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHH
T ss_pred             eCCCCcHHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEECCCCCEEEEECCCCccccc
Confidence            99999999998764    345899999999999999999999   99999999999999999999999999999864322


Q ss_pred             CCccccceeecCCceeeeecC
Q 026214          218 GGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ....   .....++..|++||
T Consensus       170 ~~~~---~~~~~~~~~y~aPE  187 (302)
T 2j7t_A          170 TLQK---RDSFIGTPYWMAPE  187 (302)
T ss_dssp             HHHC--------CCGGGCCHH
T ss_pred             cccc---cccccCChhhcCCe
Confidence            1111   11122445577776

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.96  E-value=8e-31  Score=235.60  Aligned_cols=175  Identities=17%  Similarity=0.234  Sum_probs=144.7

Q ss_pred             HHHHHHHhcCCCcCCeeecccceEEEEEEE-CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcc
Q 026214           54 AQELKLATNNYDQKNVITEDWGCILYKGFW-QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIP  132 (241)
Q Consensus        54 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  132 (241)
                      .+.+....+.|...++||+|+||.||+|.+ .+..||||.+.... ...+.|.+|+.+++.++||||+++++++.. +..
T Consensus       259 ~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~  336 (535)
T 2h8h_A          259 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPI  336 (535)
T ss_dssp             TTCSBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSC
T ss_pred             ccceecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccc
Confidence            344555667788889999999999999999 56789999998654 345789999999999999999999999876 678


Q ss_pred             eEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCc
Q 026214          133 ILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS  212 (241)
Q Consensus       133 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a  212 (241)
                      ++||||+.+|+|.+++...   ....+++..++.++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||++
T Consensus       337 ~lv~e~~~~gsL~~~l~~~---~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a  410 (535)
T 2h8h_A          337 YIVTEYMSKGSLLDFLKGE---TGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLA  410 (535)
T ss_dssp             EEEECCCTTEEHHHHHSHH---HHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCTTST
T ss_pred             eEeeehhcCCcHHHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEEcCCCcEEEcccccc
Confidence            9999999999999999653   1245899999999999999999999   999999999999999999999999999999


Q ss_pred             eecCCCCccccceeecCCceeeeecC
Q 026214          213 ISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +.+..+...  .......+..|++||
T Consensus       411 ~~~~~~~~~--~~~~~~~~~~y~aPE  434 (535)
T 2h8h_A          411 RLIEDNEYT--ARQGAKFPIKWTAPE  434 (535)
T ss_dssp             TTCCCHHHH--TTCSTTSCGGGSCHH
T ss_pred             eecCCCcee--cccCCcCcccccCHH
Confidence            876543211  111222334577887

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.96  E-value=1.8e-29  Score=209.85  Aligned_cols=167  Identities=20%  Similarity=0.259  Sum_probs=143.0

Q ss_pred             HhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC---------cchhhHHHHHHHHHhcC-CCceeeEeeEEe
Q 026214           60 ATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR---------DGHGSCINNIVYAAQMS-HDHILKLIGCCL  127 (241)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~---------~~~~~~~~E~~~l~~l~-h~niv~l~~~~~  127 (241)
                      ..++|...+.||+|+||.||+|.+  ++..||+|.+.....         ...+.+.+|+.++.++. ||||+++++++.
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~   94 (298)
T 1phk_A           15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE   94 (298)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred             hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence            346788899999999999999999  789999999976431         12356789999999995 999999999999


Q ss_pred             cCCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEc
Q 026214          128 ETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMF  207 (241)
Q Consensus       128 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~  207 (241)
                      ..+..++||||+++++|.+++...     ..+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+
T Consensus        95 ~~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~  166 (298)
T 1phk_A           95 TNTFFFLVFDLMKKGELFDYLTEK-----VTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLT  166 (298)
T ss_dssp             CSSEEEEEEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEEC
T ss_pred             cCCeEEEEEeccCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEcCCCcEEEe
Confidence            999999999999999999999664     35899999999999999999999   9999999999999999999999999


Q ss_pred             cccCceecCCCCccccceeecCCceeeeecC
Q 026214          208 DFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       208 DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |||++..+..+....    ....+..|.+||
T Consensus       167 dfg~~~~~~~~~~~~----~~~~~~~y~aPE  193 (298)
T 1phk_A          167 DFGFSCQLDPGEKLR----EVCGTPSYLAPE  193 (298)
T ss_dssp             CCTTCEECCTTCCBC----CCCSCGGGCCHH
T ss_pred             cccchhhcCCCcccc----cccCCccccCHH
Confidence            999999876544322    223445677777

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.96  E-value=1.6e-29  Score=209.16  Aligned_cols=164  Identities=17%  Similarity=0.187  Sum_probs=141.4

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      ++|...+.||+|+||.||+|.+  ++..||+|.+....   ......+.+|+.++..++||||+++++++...+..+++|
T Consensus        14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   93 (284)
T 2vgo_A           14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML   93 (284)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence            5688889999999999999999  78899999987532   223467899999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||+++++|.+++...     ..+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++....
T Consensus        94 e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~  165 (284)
T 2vgo_A           94 EFAPRGELYKELQKH-----GRFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAP  165 (284)
T ss_dssp             CCCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTCCEEECCCTTCEECS
T ss_pred             EeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEEcCCCCEEEecccccccCc
Confidence            999999999999765     34899999999999999999999   9999999999999999999999999999998765


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .....     ...++..|++||
T Consensus       166 ~~~~~-----~~~~~~~y~aPE  182 (284)
T 2vgo_A          166 SLRRR-----TMCGTLDYLPPE  182 (284)
T ss_dssp             SSCBC-----CCCSCGGGCCHH
T ss_pred             ccccc-----cccCCCCcCCHH
Confidence            43221     123455677777

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.96  E-value=6.5e-30  Score=212.74  Aligned_cols=170  Identities=18%  Similarity=0.272  Sum_probs=137.8

Q ss_pred             cCCCcCCeeecccceEEEEEEE-----CCeEEEEEEeeccCC-cchhhHHHHHHHHHhcCCCceeeEeeEEe-cCCcceE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW-----QERLISVMRFRESNR-DGHGSCINNIVYAAQMSHDHILKLIGCCL-ETPIPIL  134 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~l  134 (241)
                      ..|...+.||+|+||.||+|.+     ....+|+|.+..... ...+.+.+|+.++++++||||+++++++. .++..++
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  104 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV  104 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred             eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence            4577789999999999999997     223589998876432 33467899999999999999999999865 4567899


Q ss_pred             EEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCcee
Q 026214          135 AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSIS  214 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~  214 (241)
                      +|||+++++|.+++...    ...+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.+||+|||++..
T Consensus       105 v~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~ql~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~  177 (298)
T 3f66_A          105 VLPYMKHGDLRNFIRNE----THNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARD  177 (298)
T ss_dssp             EEECCTTCBHHHHHHCT----TCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSCGGGCC
T ss_pred             EEeCCCCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEECCCCCEEECccccccc
Confidence            99999999999999654    455899999999999999999999   99999999999999999999999999999998


Q ss_pred             cCCCCccccce-eecCCceeeeecC
Q 026214          215 IPEGGTSGAKC-LKSERTEICCVRE  238 (241)
Q Consensus       215 ~~~~~~~~~~~-~~~~~~~~~~~~e  238 (241)
                      +.......... .....+..|++||
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~y~aPE  202 (298)
T 3f66_A          178 MYDKEYYSVHNKTGAKLPVKWMALE  202 (298)
T ss_dssp             CSCGGGCBC-----CCBCGGGSCHH
T ss_pred             ccccchhccccccCCCCCccccChH
Confidence            76544322222 2223344678887

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.96  E-value=1.8e-30  Score=217.92  Aligned_cols=154  Identities=16%  Similarity=0.187  Sum_probs=134.2

Q ss_pred             HHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEec----CCcc
Q 026214           59 LATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLE----TPIP  132 (241)
Q Consensus        59 ~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~  132 (241)
                      ...++|...+.||+|+||.||++.+  ++..||+|.+........+.+.+|+.+++.++||||+++++++..    ....
T Consensus        26 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~  105 (317)
T 2buj_A           26 IDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEA  105 (317)
T ss_dssp             ETTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEE
T ss_pred             ECCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCcee
Confidence            3456799999999999999999998  889999999877655566789999999999999999999999873    3478


Q ss_pred             eEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCc
Q 026214          133 ILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS  212 (241)
Q Consensus       133 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a  212 (241)
                      +++|||+.+++|.+++..... ....+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.++|+|||++
T Consensus       106 ~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~  181 (317)
T 2buj_A          106 WLLLPFFKRGTLWNEIERLKD-KGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSM  181 (317)
T ss_dssp             EEEEECCTTCBHHHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred             EEEEEeCCCCcHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCCEEEEecCcc
Confidence            999999999999999976321 2456899999999999999999999   999999999999999999999999999999


Q ss_pred             eecC
Q 026214          213 ISIP  216 (241)
Q Consensus       213 ~~~~  216 (241)
                      ....
T Consensus       182 ~~~~  185 (317)
T 2buj_A          182 NQAC  185 (317)
T ss_dssp             EESC
T ss_pred             hhcc
Confidence            8764

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.96  E-value=8.9e-30  Score=213.49  Aligned_cols=169  Identities=15%  Similarity=0.148  Sum_probs=136.7

Q ss_pred             HhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCc---chhhHHHHHHHHHhcCCCceeeEeeEEecCCcceE
Q 026214           60 ATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRD---GHGSCINNIVYAAQMSHDHILKLIGCCLETPIPIL  134 (241)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  134 (241)
                      ..++|...+.||+|+||.||+|.+  ++..||+|.+......   ..+.+.+|+.++..++||||+++++++..++..++
T Consensus        32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l  111 (309)
T 2h34_A           32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYV  111 (309)
T ss_dssp             --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred             EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEE
Confidence            347899999999999999999998  7899999998764322   23678899999999999999999999999999999


Q ss_pred             EEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCcee
Q 026214          135 AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSIS  214 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~  214 (241)
                      +|||+++++|.+++...     ..+++..+..++.|++.||.|||   +.+|+|+||||+||+++.++.+||+|||++..
T Consensus       112 v~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~  183 (309)
T 2h34_A          112 DMRLINGVDLAAMLRRQ-----GPLAPPRAVAIVRQIGSALDAAH---AAGATHRDVKPENILVSADDFAYLVDFGIASA  183 (309)
T ss_dssp             EEECCCCEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSCCC---
T ss_pred             EEEecCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCcCCcCCCChHHEEEcCCCCEEEecCccCcc
Confidence            99999999999999764     35899999999999999999999   99999999999999999999999999999987


Q ss_pred             cCCCCccccceeecCCceeeeecC
Q 026214          215 IPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ..........  ...++..|++||
T Consensus       184 ~~~~~~~~~~--~~~~~~~y~aPE  205 (309)
T 2h34_A          184 TTDEKLTQLG--NTVGTLYYMAPE  205 (309)
T ss_dssp             ---------------CCGGGCCGG
T ss_pred             cccccccccc--ccCCCcCccCHH
Confidence            7654322211  222445678887

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.96  E-value=9.3e-30  Score=212.61  Aligned_cols=166  Identities=23%  Similarity=0.218  Sum_probs=139.7

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      .+.|...+.||+|+||.||+|.+  ++..||+|.+..........+.+|+.++..++||||+++++++...+..+++|||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (304)
T 2jam_A            8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL   87 (304)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence            35688889999999999999998  7899999999876544556789999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeE---cCCCcEEEccccCceec
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILF---NEENVAKMFDFSLSISI  215 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill---~~~~~~ki~DfG~a~~~  215 (241)
                      +++++|.+++...     ..+++..+..++.|++.||.|||   +.+++|+||||+||++   +.++.++|+|||++...
T Consensus        88 ~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~  159 (304)
T 2jam_A           88 VSGGELFDRILER-----GVYTEKDASLVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKME  159 (304)
T ss_dssp             CCSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCC
T ss_pred             CCCccHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEecCCCCCCEEEccCCcceec
Confidence            9999999999664     34899999999999999999999   9999999999999999   77899999999999765


Q ss_pred             CCCCccccceeecCCceeeeecCC
Q 026214          216 PEGGTSGAKCLKSERTEICCVREN  239 (241)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~e~  239 (241)
                      ......     ...++..|.+||-
T Consensus       160 ~~~~~~-----~~~~~~~y~aPE~  178 (304)
T 2jam_A          160 QNGIMS-----TACGTPGYVAPEV  178 (304)
T ss_dssp             CCBTTH-----HHHSCCCBCCTTT
T ss_pred             CCCccc-----cccCCCCccChHH
Confidence            433211     1224556888883

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.96  E-value=7.6e-30  Score=209.82  Aligned_cols=168  Identities=20%  Similarity=0.196  Sum_probs=142.8

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      ++|...+.||+|+||.||+|.+  ++..||+|.+.... ....+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   86 (276)
T 2yex_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   86 (276)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEe
Confidence            5688889999999999999998  78999999987543 23456789999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      +++++|.+++..     ...+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++..+..+
T Consensus        87 ~~~~~L~~~l~~-----~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~  158 (276)
T 2yex_A           87 CSGGELFDRIEP-----DIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN  158 (276)
T ss_dssp             CTTEEGGGGSBT-----TTBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred             cCCCcHHHHHhh-----ccCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCChHHEEEccCCCEEEeeCCCccccCCC
Confidence            999999999843     345899999999999999999999   999999999999999999999999999999877544


Q ss_pred             CccccceeecCCceeeeecC
Q 026214          219 GTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ..... .....++..|.+||
T Consensus       159 ~~~~~-~~~~~~~~~y~aPE  177 (276)
T 2yex_A          159 NRERL-LNKMCGTLPYVAPE  177 (276)
T ss_dssp             TEECC-BCCCCSCGGGCCGG
T ss_pred             cchhc-ccCCccccCccChH
Confidence            32111 11223455678887

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.96  E-value=2.7e-30  Score=218.52  Aligned_cols=169  Identities=18%  Similarity=0.218  Sum_probs=134.0

Q ss_pred             HHHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC--cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcce
Q 026214           58 KLATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR--DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPI  133 (241)
Q Consensus        58 ~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  133 (241)
                      ....++|...+.||+|+||.||+|.+  ++..||+|++.....  .....+.+|+.+++.++||||+++++++...+..+
T Consensus        30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  109 (329)
T 3gbz_A           30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLH  109 (329)
T ss_dssp             --CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEE
T ss_pred             ccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEE
Confidence            34456799999999999999999998  899999999875432  22456789999999999999999999999999999


Q ss_pred             EEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeE-----cCCCcEEEcc
Q 026214          134 LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILF-----NEENVAKMFD  208 (241)
Q Consensus       134 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill-----~~~~~~ki~D  208 (241)
                      +||||++ ++|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||+     +..+.+||+|
T Consensus       110 lv~e~~~-~~L~~~~~~~-----~~~~~~~~~~i~~ql~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~D  180 (329)
T 3gbz_A          110 LIFEYAE-NDLKKYMDKN-----PDVSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGD  180 (329)
T ss_dssp             EEEECCS-EEHHHHHHHC-----TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEC-----CCEEEECC
T ss_pred             EEEecCC-CCHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCEECCCCCHHHEEEecCCCCccceEEECc
Confidence            9999998 5999999665     34899999999999999999999   9999999999999999     4556699999


Q ss_pred             ccCceecCCCCccccceeecCCceeeeecC
Q 026214          209 FSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       209 fG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ||++..+..+.....   ...++..|+|||
T Consensus       181 fg~a~~~~~~~~~~~---~~~~t~~y~aPE  207 (329)
T 3gbz_A          181 FGLARAFGIPIRQFT---HEIITLWYRPPE  207 (329)
T ss_dssp             TTHHHHHC--------------CCTTCCHH
T ss_pred             CCCccccCCcccccC---CCcCCccccCHH
Confidence            999988764432221   122355678887

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.96  E-value=1.2e-30  Score=219.35  Aligned_cols=185  Identities=18%  Similarity=0.275  Sum_probs=149.8

Q ss_pred             cccCHHHHHHHhcCCCcCCeeecccceEEEEEEEC-------CeEEEEEEeeccCC-cchhhHHHHHHHHHhcCCCceee
Q 026214           50 RIFSAQELKLATNNYDQKNVITEDWGCILYKGFWQ-------ERLISVMRFRESNR-DGHGSCINNIVYAAQMSHDHILK  121 (241)
Q Consensus        50 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~  121 (241)
                      ..+..+++....++|...+.||+|+||.||+|.+.       +..||+|.+..... .....+.+|+.+++.++||||++
T Consensus        13 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~   92 (322)
T 1p4o_A           13 DVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR   92 (322)
T ss_dssp             SCCCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCC
T ss_pred             cccChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEee
Confidence            34556677777888999999999999999999862       57899999875432 23456889999999999999999


Q ss_pred             EeeEEecCCcceEEEeeCCCCCHHHHHhhcC-----CCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCe
Q 026214          122 LIGCCLETPIPILAFESVEYGNLRDRILSAS-----QPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHI  196 (241)
Q Consensus       122 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~-----~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Ni  196 (241)
                      +++++...+..++||||+++++|.+++....     ......+++..+..++.|++.||.|||   +.+|+||||||+||
T Consensus        93 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~NI  169 (322)
T 1p4o_A           93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNC  169 (322)
T ss_dssp             EEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGE
T ss_pred             eEEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCCccCCCccceE
Confidence            9999999999999999999999999997531     011245789999999999999999999   99999999999999


Q ss_pred             eEcCCCcEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          197 LFNEENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       197 ll~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +++.++.+||+|||++..+....... ....+..+..|++||
T Consensus       170 li~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE  210 (322)
T 1p4o_A          170 MVAEDFTVKIGDFGMTRDIYETDYYR-KGGKGLLPVRWMSPE  210 (322)
T ss_dssp             EECTTCCEEECCTTCCCGGGGGGCEE-GGGSSEECGGGCCHH
T ss_pred             EEcCCCeEEECcCccccccccccccc-cccCCCCCCCccChh
Confidence            99999999999999998765432211 111222344578887

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.96  E-value=1.7e-30  Score=219.30  Aligned_cols=177  Identities=18%  Similarity=0.267  Sum_probs=135.7

Q ss_pred             HHHHHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcC-CCceeeEeeEEe-----
Q 026214           56 ELKLATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMS-HDHILKLIGCCL-----  127 (241)
Q Consensus        56 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~-----  127 (241)
                      .+.....+|...+.||+|+||.||+|.+  ++..||+|++..........+.+|+.++.++. ||||+++++++.     
T Consensus        22 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~  101 (337)
T 3ll6_A           22 TVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEE  101 (337)
T ss_dssp             EEEETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTT
T ss_pred             eeeccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccc
Confidence            3334456788899999999999999999  88999999987665555677899999999995 999999999984     


Q ss_pred             ---cCCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCC--eEEccCCCCCeeEcCCC
Q 026214          128 ---ETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRP--IVYRDFKTAHILFNEEN  202 (241)
Q Consensus       128 ---~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~--ivH~dlk~~Nill~~~~  202 (241)
                         .....+++|||+. |+|.+++....  ....+++..+..++.|++.||.|||   +.+  |+|+||||+|||++.++
T Consensus       102 ~~~~~~~~~lv~e~~~-g~L~~~l~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH---~~~~~ivH~Dikp~NIl~~~~~  175 (337)
T 3ll6_A          102 SDTGQAEFLLLTELCK-GQLVEFLKKME--SRGPLSCDTVLKIFYQTCRAVQHMH---RQKPPIIHRDLKVENLLLSNQG  175 (337)
T ss_dssp             STTSSEEEEEEEECCS-EEHHHHHHHHH--TTCSCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCCCCCGGGCEECTTS
T ss_pred             cccCCceEEEEEEecC-CCHHHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCEEEccCCcccEEECCCC
Confidence               2335799999996 79999987631  2456999999999999999999999   888  99999999999999999


Q ss_pred             cEEEccccCceecCCCCcccc---------ceeecCCceeeeecC
Q 026214          203 VAKMFDFSLSISIPEGGTSGA---------KCLKSERTEICCVRE  238 (241)
Q Consensus       203 ~~ki~DfG~a~~~~~~~~~~~---------~~~~~~~~~~~~~~e  238 (241)
                      .+||+|||++..+........         ......++..|++||
T Consensus       176 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE  220 (337)
T 3ll6_A          176 TIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPE  220 (337)
T ss_dssp             CEEBCCCTTCBCCSSCC----------------------------
T ss_pred             CEEEecCccceeccccCcccccccccccchhhccccCCCCcCChh
Confidence            999999999998765433211         111233566788888

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.96  E-value=7.3e-31  Score=216.52  Aligned_cols=165  Identities=20%  Similarity=0.246  Sum_probs=132.9

Q ss_pred             HhcCCCcCCeeecccceEEEEEEECCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecC-CcceEEEee
Q 026214           60 ATNNYDQKNVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLET-PIPILAFES  138 (241)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~lv~e~  138 (241)
                      ..++|...+.||+|+||.||++.+++..||+|.+....  ..+.+.+|+.++..++||||+++++++... +..+++|||
T Consensus        19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~   96 (278)
T 1byg_A           19 NMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY   96 (278)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred             ChhhceEEeEEecCCCceEEEEEEcCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence            34678889999999999999999999999999987543  557799999999999999999999997654 478999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      +++++|.+++...   ....+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.++|+|||++......
T Consensus        97 ~~~~~L~~~l~~~---~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~  170 (278)
T 1byg_A           97 MAKGSLVDYLRSR---GRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST  170 (278)
T ss_dssp             CTTEEHHHHHHHH---HHHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC-------
T ss_pred             CCCCCHHHHHHhc---ccccCCHHHHHHHHHHHHHHHHHHH---hCCccccCCCcceEEEeCCCcEEEeecccccccccc
Confidence            9999999999764   2234789999999999999999999   999999999999999999999999999999866543


Q ss_pred             CccccceeecCCceeeeecC
Q 026214          219 GTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ...      ...+..|++||
T Consensus       171 ~~~------~~~~~~y~aPE  184 (278)
T 1byg_A          171 QDT------GKLPVKWTAPE  184 (278)
T ss_dssp             -----------CCTTTSCHH
T ss_pred             ccC------CCccccccCHH
Confidence            221      12234567776

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.96  E-value=1.3e-29  Score=208.48  Aligned_cols=167  Identities=21%  Similarity=0.186  Sum_probs=138.7

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEE
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA  135 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  135 (241)
                      .++|...+.||+|+||.||+|.+  ++..||+|.+....   ......+.+|+.+++.++||||+++++++...+..+++
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   89 (276)
T 2h6d_A           10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV   89 (276)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence            36788899999999999999998  78999999987542   23456789999999999999999999999999999999


Q ss_pred             EeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceec
Q 026214          136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI  215 (241)
Q Consensus       136 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~  215 (241)
                      |||+++++|.+++...     ..+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++...
T Consensus        90 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~  161 (276)
T 2h6d_A           90 MEYVSGGELFDYICKH-----GRVEEMEARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM  161 (276)
T ss_dssp             EECCCSCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HHCSSCCCCCGGGEEECTTSCEEECCCCGGGCC
T ss_pred             EeccCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChhhEEECCCCCEEEeeccccccc
Confidence            9999999999999765     34899999999999999999999   999999999999999999999999999999877


Q ss_pred             CCCCccccceeecCCceeeeecCC
Q 026214          216 PEGGTSGAKCLKSERTEICCVREN  239 (241)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~e~  239 (241)
                      .......    ...++..|++||-
T Consensus       162 ~~~~~~~----~~~~~~~y~aPE~  181 (276)
T 2h6d_A          162 SDGEFLR----TSCGSPNYAAPEV  181 (276)
T ss_dssp             CC-----------------CCTGG
T ss_pred             CCCccee----cccCCccccCHHH
Confidence            6543221    2234556788873

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.96  E-value=4.3e-30  Score=217.32  Aligned_cols=166  Identities=22%  Similarity=0.323  Sum_probs=135.3

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcc--hhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEe
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDG--HGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFE  137 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  137 (241)
                      ++|...+.||+|+||.||+|.+  ++..||+|++.......  .+.+.+|+.++..++||||+++++++...+..++|||
T Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  104 (331)
T 4aaa_A           25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE  104 (331)
T ss_dssp             GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence            4577889999999999999999  68999999987654222  3557899999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCC
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE  217 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~  217 (241)
                      |+++++|.+++...     ..+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.+||+|||++..+..
T Consensus       105 ~~~~~~l~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  176 (331)
T 4aaa_A          105 FVDHTILDDLELFP-----NGLDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAA  176 (331)
T ss_dssp             CCSEEHHHHHHHST-----TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred             cCCcchHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHH---HCCEEccCcChheEEEcCCCcEEEEeCCCceeecC
Confidence            99988888876443     45899999999999999999999   99999999999999999999999999999987765


Q ss_pred             CCccccceeecCCceeeeecC
Q 026214          218 GGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +.....   ...++..|++||
T Consensus       177 ~~~~~~---~~~~t~~y~aPE  194 (331)
T 4aaa_A          177 PGEVYD---DEVATRWYRAPE  194 (331)
T ss_dssp             ----------CCCCCTTCCHH
T ss_pred             CccccC---CCcCCccccCcc
Confidence            433222   223455678887

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.96  E-value=3e-30  Score=221.13  Aligned_cols=171  Identities=15%  Similarity=0.138  Sum_probs=135.7

Q ss_pred             HhcCCCcCCeeecccceEEEEEEE-C------CeEEEEEEeeccCCcc-----------hhhHHHHHHHHHhcCCCceee
Q 026214           60 ATNNYDQKNVITEDWGCILYKGFW-Q------ERLISVMRFRESNRDG-----------HGSCINNIVYAAQMSHDHILK  121 (241)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~-~------~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~h~niv~  121 (241)
                      ..++|...+.||+|+||.||+|.+ .      +..||+|.+.......           ...+..|+..+..++||||++
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~  112 (364)
T 3op5_A           33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK  112 (364)
T ss_dssp             TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred             CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence            345788999999999999999998 2      4789999987653211           122345566677778999999


Q ss_pred             EeeEEecC----CcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCee
Q 026214          122 LIGCCLET----PIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHIL  197 (241)
Q Consensus       122 l~~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nil  197 (241)
                      +++++...    ...++||||+ +++|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||
T Consensus       113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~----~~~l~~~~~~~i~~qi~~~l~~lH---~~~iiHrDlkp~Nil  184 (364)
T 3op5_A          113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN----AKRFSRKTVLQLSLRILDILEYIH---EHEYVHGDIKASNLL  184 (364)
T ss_dssp             EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT----TSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEE
T ss_pred             EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEEecCCHHHEE
Confidence            99999765    4589999999 89999999764    356999999999999999999999   999999999999999


Q ss_pred             Ec--CCCcEEEccccCceecCCCCccccce----eecCCceeeeecC
Q 026214          198 FN--EENVAKMFDFSLSISIPEGGTSGAKC----LKSERTEICCVRE  238 (241)
Q Consensus       198 l~--~~~~~ki~DfG~a~~~~~~~~~~~~~----~~~~~~~~~~~~e  238 (241)
                      ++  .++.+||+|||+|+.+..+.......    ....++..|++||
T Consensus       185 l~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  231 (364)
T 3op5_A          185 LNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSID  231 (364)
T ss_dssp             EESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHH
T ss_pred             EecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHH
Confidence            99  88999999999999886543322111    1222566788887

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.96  E-value=1.8e-30  Score=223.64  Aligned_cols=167  Identities=10%  Similarity=0.035  Sum_probs=130.5

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeecc---CCcchhhHHHHH---HHHHhcCCCceeeEe-------eE
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRES---NRDGHGSCINNI---VYAAQMSHDHILKLI-------GC  125 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---~~~~~~~~~~E~---~~l~~l~h~niv~l~-------~~  125 (241)
                      .+.|...+.||+|+||.||+|.+  ++..||||++...   .....+.+.+|+   ..++.++||||++++       ++
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~  151 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  151 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence            35677789999999999999997  7899999999753   223456788999   555566899999998       55


Q ss_pred             EecCC-----------------cceEEEeeCCCCCHHHHHhhcCCC--CCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCe
Q 026214          126 CLETP-----------------IPILAFESVEYGNLRDRILSASQP--QTEPLLMKHRLKIAMDIAHALAYLHFGFPRPI  186 (241)
Q Consensus       126 ~~~~~-----------------~~~lv~e~~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i  186 (241)
                      +...+                 ..+++|||+ +|+|.+++......  ....+++..+..++.|++.||.|||   +.+|
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i  227 (377)
T 3byv_A          152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGL  227 (377)
T ss_dssp             EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred             hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH---hCCe
Confidence            55443                 278999999 57999999764110  1223446888899999999999999   9999


Q ss_pred             EEccCCCCCeeEcCCCcEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          187 VYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       187 vH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +||||||+|||++.++.+||+|||+|+..+...    ....+   ..|+|||
T Consensus       228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~----~~~~g---~~y~aPE  272 (377)
T 3byv_A          228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARV----VSSVS---RGFEPPE  272 (377)
T ss_dssp             ECSCCCGGGEEECTTCCEEECCGGGCEETTCEE----ECCCC---TTCCCHH
T ss_pred             ecCCCCHHHEEEcCCCCEEEEechhheecCCcc----cCCCC---cCccChh
Confidence            999999999999999999999999999643311    11122   5678887

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.96  E-value=1.6e-29  Score=214.11  Aligned_cols=176  Identities=18%  Similarity=0.261  Sum_probs=143.8

Q ss_pred             HHhcCCCcCCeeecccceEEEEEEE---------CCeEEEEEEeeccCC-cchhhHHHHHHHHHhc-CCCceeeEeeEEe
Q 026214           59 LATNNYDQKNVITEDWGCILYKGFW---------QERLISVMRFRESNR-DGHGSCINNIVYAAQM-SHDHILKLIGCCL  127 (241)
Q Consensus        59 ~~~~~~~~~~~lg~G~~g~Vy~~~~---------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~  127 (241)
                      ...++|...+.||+|+||.||+|.+         ++..||+|.+..... .....+.+|+.++..+ +||||+++++++.
T Consensus        32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~  111 (334)
T 2pvf_A           32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT  111 (334)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             CCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEc
Confidence            3456788899999999999999986         346799999876532 2346789999999999 9999999999999


Q ss_pred             cCCcceEEEeeCCCCCHHHHHhhcCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCe
Q 026214          128 ETPIPILAFESVEYGNLRDRILSASQP-----------QTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHI  196 (241)
Q Consensus       128 ~~~~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Ni  196 (241)
                      ..+..++||||+++++|.+++......           ....+++..+..++.|++.||.|||   +.+|+|+||||+||
T Consensus       112 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NI  188 (334)
T 2pvf_A          112 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNV  188 (334)
T ss_dssp             SSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGE
T ss_pred             cCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCccceE
Confidence            999999999999999999999765210           1234899999999999999999999   99999999999999


Q ss_pred             eEcCCCcEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          197 LFNEENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       197 ll~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +++.++.+||+|||++..+....... ....+..+..|++||
T Consensus       189 ll~~~~~~kL~Dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE  229 (334)
T 2pvf_A          189 LVTENNVMKIADFGLARDINNIDYYK-KTTNGRLPVKWMAPE  229 (334)
T ss_dssp             EECTTCCEEECCCTTCEECTTTSSEE-CCSCCCCCGGGCCHH
T ss_pred             EEcCCCCEEEcccccccccccccccc-ccCCCCcccceeChH
Confidence            99999999999999999876543221 122333445688887

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.96  E-value=7e-30  Score=210.96  Aligned_cols=169  Identities=22%  Similarity=0.285  Sum_probs=136.8

Q ss_pred             HhcCCCcCCeeecccceEEEEEEE-----CCeEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcce
Q 026214           60 ATNNYDQKNVITEDWGCILYKGFW-----QERLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPI  133 (241)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  133 (241)
                      ..++|...+.||+|+||.||+|.+     ++..||+|.+.... ....+.+.+|+.+++.++||||+++++++.. +..+
T Consensus        10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~   88 (281)
T 3cc6_A           10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTW   88 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCE
T ss_pred             cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCE
Confidence            346788899999999999999987     23469999987653 2345678999999999999999999999864 4578


Q ss_pred             EEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCce
Q 026214          134 LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSI  213 (241)
Q Consensus       134 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~  213 (241)
                      ++|||+++++|.+++...    ...+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.+||+|||++.
T Consensus        89 ~v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~  161 (281)
T 3cc6_A           89 IIMELYPYGELGHYLERN----KNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSR  161 (281)
T ss_dssp             EEEECCTTCBHHHHHHHH----TTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEEETTEEEECCCCGGG
T ss_pred             EEEecCCCCCHHHHHHhc----cccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEECCCCcEEeCccCCCc
Confidence            999999999999999765    345899999999999999999999   9999999999999999999999999999998


Q ss_pred             ecCCCCccccceeecCCceeeeecC
Q 026214          214 SIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ..........  .....+..|++||
T Consensus       162 ~~~~~~~~~~--~~~~~~~~y~aPE  184 (281)
T 3cc6_A          162 YIEDEDYYKA--SVTRLPIKWMSPE  184 (281)
T ss_dssp             CC-----------CCCCCGGGCCHH
T ss_pred             cccccccccc--ccCCCCcceeCch
Confidence            7765432221  1222344678887

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.96  E-value=5.1e-30  Score=212.40  Aligned_cols=170  Identities=17%  Similarity=0.314  Sum_probs=132.7

Q ss_pred             hcCCCcCCeeecccceEEEEEEE---CC--eEEEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcc
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW---QE--RLISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIP  132 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~---~~--~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  132 (241)
                      .++|...+.||+|+||.||+|.+   ++  ..||+|.+....   ....+.+.+|+.++..++||||+++++++.... .
T Consensus        17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~   95 (291)
T 1u46_A           17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M   95 (291)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred             hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence            35688889999999999999986   22  368999887542   234567899999999999999999999998765 8


Q ss_pred             eEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCc
Q 026214          133 ILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS  212 (241)
Q Consensus       133 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a  212 (241)
                      ++++||+++++|.+++...    ...+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.+||+|||++
T Consensus        96 ~~v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~  168 (291)
T 1u46_A           96 KMVTELAPLGSLLDRLRKH----QGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLM  168 (291)
T ss_dssp             EEEEECCTTCBHHHHHHHH----GGGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTC
T ss_pred             eeeEecccCCCHHHHHHhc----cCCcCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEEcCCCCEEEcccccc
Confidence            8999999999999999765    345899999999999999999999   999999999999999999999999999999


Q ss_pred             eecCCCCccccceeecCCceeeeecC
Q 026214          213 ISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ..+...............+..|++||
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~y~aPE  194 (291)
T 1u46_A          169 RALPQNDDHYVMQEHRKVPFAWCAPE  194 (291)
T ss_dssp             EECCC-CCEEEC-----CCGGGCCHH
T ss_pred             ccccccccchhhhccCCCCceeeCch
Confidence            98876554333333333444578887

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.96  E-value=5.3e-30  Score=213.02  Aligned_cols=149  Identities=20%  Similarity=0.335  Sum_probs=132.0

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEec----------
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLE----------  128 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----------  128 (241)
                      .++|...+.||+|+||.||+|.+  ++..||+|.+.... .....+.+|+.+++.++||||+++++++..          
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   83 (303)
T 1zy4_A            5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA   83 (303)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred             cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccH-HHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence            35688889999999999999998  78999999986542 345678999999999999999999998865          


Q ss_pred             ---CCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEE
Q 026214          129 ---TPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAK  205 (241)
Q Consensus       129 ---~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~k  205 (241)
                         .+..++||||+++++|.+++...    ...+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.+|
T Consensus        84 ~~~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dlkp~Nil~~~~~~~k  156 (303)
T 1zy4_A           84 VKKKSTLFIQMEYCENGTLYDLIHSE----NLNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVK  156 (303)
T ss_dssp             --CEEEEEEEEECCCSCBHHHHHHHS----CGGGCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEE
T ss_pred             cccCCceEEEEecCCCCCHHHhhhcc----ccccchHHHHHHHHHHHHHHHHHH---hCCeecccCCHHhEEEcCCCCEE
Confidence               34679999999999999999764    345788999999999999999999   99999999999999999999999


Q ss_pred             EccccCceecCC
Q 026214          206 MFDFSLSISIPE  217 (241)
Q Consensus       206 i~DfG~a~~~~~  217 (241)
                      |+|||++..+..
T Consensus       157 l~dfg~~~~~~~  168 (303)
T 1zy4_A          157 IGDFGLAKNVHR  168 (303)
T ss_dssp             ECCCCCCSCTTC
T ss_pred             EeeCcchhhccc
Confidence            999999987754

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.96  E-value=1.9e-29  Score=212.94  Aligned_cols=170  Identities=24%  Similarity=0.298  Sum_probs=137.1

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEE--EEEEeeccC-CcchhhHHHHHHHHHhc-CCCceeeEeeEEecCCcceEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLI--SVMRFRESN-RDGHGSCINNIVYAAQM-SHDHILKLIGCCLETPIPILA  135 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~v--avK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv  135 (241)
                      ++|...+.||+|+||.||+|.+  ++..+  |+|.+.... ......+.+|+.++.++ +||||+++++++...+..++|
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv  104 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA  104 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence            5688889999999999999998  66654  999887532 33456789999999999 999999999999999999999


Q ss_pred             EeeCCCCCHHHHHhhcC-----------CCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcE
Q 026214          136 FESVEYGNLRDRILSAS-----------QPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVA  204 (241)
Q Consensus       136 ~e~~~~gsL~~~l~~~~-----------~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~  204 (241)
                      |||+++++|.+++....           ......+++..+..++.|++.||.|||   +.+|+|+||||+|||++.++.+
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~  181 (327)
T 1fvr_A          105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVA  181 (327)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCE
T ss_pred             EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCccceEEEcCCCeE
Confidence            99999999999997642           012346899999999999999999999   9999999999999999999999


Q ss_pred             EEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          205 KMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       205 ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ||+|||+++.......    ......+..|++||
T Consensus       182 kL~Dfg~~~~~~~~~~----~~~~~~~~~y~aPE  211 (327)
T 1fvr_A          182 KIADFGLSRGQEVYVK----KTMGRLPVRWMAIE  211 (327)
T ss_dssp             EECCTTCEESSCEECC----C----CCTTTCCHH
T ss_pred             EEcccCcCcccccccc----ccCCCCCccccChh
Confidence            9999999975432211    11222344567776

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.96  E-value=3.5e-29  Score=211.14  Aligned_cols=159  Identities=16%  Similarity=0.203  Sum_probs=136.8

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcC-CCceeeEeeEEec--CCcceEEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMS-HDHILKLIGCCLE--TPIPILAF  136 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~--~~~~~lv~  136 (241)
                      ++|...+.||+|+||.||+|.+  ++..||+|.+...   ..+.+.+|+.++..+. ||||+++++++..  ....+++|
T Consensus        36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~  112 (330)
T 3nsz_A           36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF  112 (330)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence            5688889999999999999998  8899999998743   3567899999999996 9999999999987  56789999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCC-cEEEccccCceec
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEEN-VAKMFDFSLSISI  215 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~-~~ki~DfG~a~~~  215 (241)
                      ||+.+++|.+++.        .+++..+..++.|++.||.|||   +.+|+||||||+|||++.++ .+||+|||+|+.+
T Consensus       113 e~~~~~~l~~~~~--------~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~  181 (330)
T 3nsz_A          113 EHVNNTDFKQLYQ--------TLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY  181 (330)
T ss_dssp             ECCCCCCHHHHGG--------GCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred             eccCchhHHHHHH--------hCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEc
Confidence            9999999999883        2788999999999999999999   99999999999999999766 8999999999987


Q ss_pred             CCCCccccceeecCCceeeeecC
Q 026214          216 PEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ........    ..++..|++||
T Consensus       182 ~~~~~~~~----~~~~~~y~aPE  200 (330)
T 3nsz_A          182 HPGQEYNV----RVASRYFKGPE  200 (330)
T ss_dssp             CTTCCCCS----CCSCGGGCCHH
T ss_pred             CCCCcccc----ccccccccChh
Confidence            65543222    23344577777

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=4.3e-30  Score=221.18  Aligned_cols=168  Identities=18%  Similarity=0.275  Sum_probs=127.1

Q ss_pred             CCcCCeeecccceEEEEEEE---CC--eEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEec-CCcceEEE
Q 026214           64 YDQKNVITEDWGCILYKGFW---QE--RLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLE-TPIPILAF  136 (241)
Q Consensus        64 ~~~~~~lg~G~~g~Vy~~~~---~~--~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~lv~  136 (241)
                      |...+.||+|+||.||+|.+   ++  ..||+|.+.... ....+.+.+|+.++++++||||+++++++.. .+..++||
T Consensus        91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~  170 (373)
T 3c1x_A           91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL  170 (373)
T ss_dssp             EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEE
T ss_pred             eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEE
Confidence            44567899999999999987   22  468999886543 2345779999999999999999999998754 45789999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||+++|+|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++.+.
T Consensus       171 e~~~~g~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~  243 (373)
T 3c1x_A          171 PYMKHGDLRNFIRNE----THNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY  243 (373)
T ss_dssp             ECCTTCBHHHHHHCT----TCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred             ECCCCCCHHHHHhhc----ccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCccchheEEECCCCCEEEeecccccccc
Confidence            999999999999654    345889999999999999999999   9999999999999999999999999999998775


Q ss_pred             CCCccccc-eeecCCceeeeecC
Q 026214          217 EGGTSGAK-CLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~-~~~~~~~~~~~~~e  238 (241)
                      ........ ......+..|++||
T Consensus       244 ~~~~~~~~~~~~~~~~~~y~aPE  266 (373)
T 3c1x_A          244 DKEFDSVHNKTGAKLPVKWMALE  266 (373)
T ss_dssp             --------------CCGGGSCHH
T ss_pred             ccccccccccCCCCCcccccChH
Confidence            54322211 12223344678887

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.96  E-value=9.9e-30  Score=215.03  Aligned_cols=169  Identities=19%  Similarity=0.329  Sum_probs=132.4

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCe----EEEEEEeecc-CCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcce
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QER----LISVMRFRES-NRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPI  133 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  133 (241)
                      .++|...++||+|+||.||+|.+  ++.    +|++|.+... .......+.+|+.++..++||||+++++++..+. .+
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~   92 (327)
T 3lzb_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ   92 (327)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred             HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence            35688899999999999999998  554    3577777543 2345677999999999999999999999998765 78


Q ss_pred             EEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCce
Q 026214          134 LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSI  213 (241)
Q Consensus       134 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~  213 (241)
                      ++++++.+|+|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++
T Consensus        93 ~v~~~~~~g~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~  165 (327)
T 3lzb_A           93 LITQLMPFGCLLDYVREH----KDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK  165 (327)
T ss_dssp             EEECCCSSCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTC--
T ss_pred             EEEEecCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHh---hCCCcCCCCCHHHEEEcCCCCEEEccCccee
Confidence            899999999999999775    446899999999999999999999   9999999999999999999999999999999


Q ss_pred             ecCCCCccccceeecCCceeeeecC
Q 026214          214 SIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .+........ ......+..|++||
T Consensus       166 ~~~~~~~~~~-~~~~~~t~~y~aPE  189 (327)
T 3lzb_A          166 LLGAEEKEYH-AEGGKVPIKWMALE  189 (327)
T ss_dssp             ---------------CCCGGGSCHH
T ss_pred             EccCcccccc-ccCCCccccccCHH
Confidence            8765443222 22333445678887

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.96  E-value=1.3e-29  Score=215.45  Aligned_cols=167  Identities=16%  Similarity=0.175  Sum_probs=136.2

Q ss_pred             hcCCCcCCeeecccceEEEEEEE-CCeEEEEEEeeccCC--cchhhHHHHHHHHHhcCC--CceeeEeeEEecCCcceEE
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW-QERLISVMRFRESNR--DGHGSCINNIVYAAQMSH--DHILKLIGCCLETPIPILA  135 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv  135 (241)
                      .+.|...+.||+|+||.||++.+ ++..||+|++.....  .....+.+|+.++..++|  |||+++++++..++..++|
T Consensus         8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv   87 (343)
T 3dbq_A            8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV   87 (343)
T ss_dssp             SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence            45688899999999999999998 888999999875432  234678999999999976  9999999999999999999


Q ss_pred             EeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceec
Q 026214          136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI  215 (241)
Q Consensus       136 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~  215 (241)
                      ||+ .+++|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++ ++.+||+|||+++.+
T Consensus        88 ~e~-~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~al~~lH---~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~  157 (343)
T 3dbq_A           88 MEC-GNIDLNSWLKKK-----KSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQM  157 (343)
T ss_dssp             ECC-CSEEHHHHHHHS-----CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC
T ss_pred             EeC-CCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEE-CCcEEEeeccccccc
Confidence            995 568999999764     45899999999999999999999   99999999999999997 578999999999987


Q ss_pred             CCCCccccceeecCCceeeeecC
Q 026214          216 PEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ..+..... .....++..|+|||
T Consensus       158 ~~~~~~~~-~~~~~gt~~y~aPE  179 (343)
T 3dbq_A          158 QPDTTSVV-KDSQVGTVNYMPPE  179 (343)
T ss_dssp             -------------CCCCSSCCHH
T ss_pred             Cccccccc-CCCCcCCcCcCCHH
Confidence            65533211 11223566788887

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.96  E-value=6e-30  Score=216.24  Aligned_cols=179  Identities=16%  Similarity=0.227  Sum_probs=144.5

Q ss_pred             HHHHHhcCCCcCCeeecccceEEEEEEE--CC-----eEEEEEEeeccCC-cchhhHHHHHHHHHhc-CCCceeeEeeEE
Q 026214           56 ELKLATNNYDQKNVITEDWGCILYKGFW--QE-----RLISVMRFRESNR-DGHGSCINNIVYAAQM-SHDHILKLIGCC  126 (241)
Q Consensus        56 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~-----~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~  126 (241)
                      ++....++|...+.||+|+||.||+|.+  ++     ..||+|.+..... .....+.+|+.++..+ +||||+++++++
T Consensus        40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~  119 (333)
T 2i1m_A           40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC  119 (333)
T ss_dssp             GGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence            3445567888999999999999999998  33     4799999876532 2346789999999999 899999999999


Q ss_pred             ecCCcceEEEeeCCCCCHHHHHhhcCC---------CCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCee
Q 026214          127 LETPIPILAFESVEYGNLRDRILSASQ---------PQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHIL  197 (241)
Q Consensus       127 ~~~~~~~lv~e~~~~gsL~~~l~~~~~---------~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nil  197 (241)
                      ...+..++||||+++|+|.+++.....         .....+++..+..++.|++.||.|||   +.+|+|+||||+|||
T Consensus       120 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl  196 (333)
T 2i1m_A          120 THGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVL  196 (333)
T ss_dssp             CSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGCE
T ss_pred             ecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCcccceEE
Confidence            999999999999999999999975310         01345799999999999999999999   999999999999999


Q ss_pred             EcCCCcEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          198 FNEENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       198 l~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ++.++.+||+|||++..+..+..... ......+..|++||
T Consensus       197 ~~~~~~~kl~Dfg~~~~~~~~~~~~~-~~~~~~~~~y~aPE  236 (333)
T 2i1m_A          197 LTNGHVAKIGDFGLARDIMNDSNYIV-KGNARLPVKWMAPE  236 (333)
T ss_dssp             EEGGGEEEBCCCGGGCCGGGCTTSEE-CSSCEECGGGSCHH
T ss_pred             ECCCCeEEECccccccccccccceee-cCCCCCCccccCHH
Confidence            99999999999999987755432211 11112234578887

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.96  E-value=1.1e-29  Score=212.64  Aligned_cols=171  Identities=18%  Similarity=0.240  Sum_probs=132.8

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC---cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEE
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR---DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA  135 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  135 (241)
                      .++|...+.||+|+||.||+|.+  ++..||+|.+.....   .....+.+|+.++..++||||+++++++...+..+++
T Consensus        31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv  110 (310)
T 2wqm_A           31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV  110 (310)
T ss_dssp             GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence            35688899999999999999998  789999999975332   2346688999999999999999999999999999999


Q ss_pred             EeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceec
Q 026214          136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI  215 (241)
Q Consensus       136 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~  215 (241)
                      |||+++++|.+++..... ....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++..+
T Consensus       111 ~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~  186 (310)
T 2wqm_A          111 LELADAGDLSRMIKHFKK-QKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFF  186 (310)
T ss_dssp             EECCCSCBHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCC------
T ss_pred             EecCCCCCHHHHHHHhcc-cccCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCcHHHEEEcCCCCEEEEeccceeee
Confidence            999999999999965311 2456899999999999999999999   999999999999999999999999999999877


Q ss_pred             CCCCccccceeecCCceeeeecC
Q 026214          216 PEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ........   ...++..|++||
T Consensus       187 ~~~~~~~~---~~~~~~~y~aPE  206 (310)
T 2wqm_A          187 SSKTTAAH---SLVGTPYYMSPE  206 (310)
T ss_dssp             ---------------CCSSCCHH
T ss_pred             cCCCcccc---ccCCCeeEeChH
Confidence            55432211   123445677887

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.96  E-value=3.9e-29  Score=208.52  Aligned_cols=170  Identities=14%  Similarity=0.188  Sum_probs=139.8

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC----CcchhhHHHHHHHHHhcCCCceeeEeeEEe--cCCcc
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN----RDGHGSCINNIVYAAQMSHDHILKLIGCCL--ETPIP  132 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~  132 (241)
                      .++|...+.||+|+||.||++.+  ++..||+|.+....    ......+.+|+.++..++||||+++++++.  .....
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM   83 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred             ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence            46899999999999999999998  78899999987542    234567899999999999999999999984  44578


Q ss_pred             eEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCc
Q 026214          133 ILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS  212 (241)
Q Consensus       133 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a  212 (241)
                      ++||||+.+ +|.+++...   ....+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.++|+|||++
T Consensus        84 ~lv~e~~~~-~l~~~~~~~---~~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~  156 (305)
T 2wtk_C           84 YMVMEYCVC-GMQEMLDSV---PEKRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVA  156 (305)
T ss_dssp             EEEEECCSE-EHHHHHHHS---TTCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred             EEEehhccC-CHHHHHHhC---cccccCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEcCCCcEEeeccccc
Confidence            999999986 488888665   3456899999999999999999999   999999999999999999999999999999


Q ss_pred             eecCCCCccccceeecCCceeeeecC
Q 026214          213 ISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .......... ......++..|++||
T Consensus       157 ~~~~~~~~~~-~~~~~~~~~~y~aPE  181 (305)
T 2wtk_C          157 EALHPFAADD-TCRTSQGSPAFQPPE  181 (305)
T ss_dssp             EECCTTCSSC-EECCCCSCGGGCCHH
T ss_pred             cccCcccccc-ccccCCCCCCCcChh
Confidence            9876433221 122334556778887

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.96  E-value=9.5e-30  Score=214.99  Aligned_cols=171  Identities=18%  Similarity=0.157  Sum_probs=139.2

Q ss_pred             HHHhcCCCcC-CeeecccceEEEEEEE--CCeEEEEEEeeccC--CcchhhHHHHHHHHHhc-CCCceeeEeeEEecCCc
Q 026214           58 KLATNNYDQK-NVITEDWGCILYKGFW--QERLISVMRFRESN--RDGHGSCINNIVYAAQM-SHDHILKLIGCCLETPI  131 (241)
Q Consensus        58 ~~~~~~~~~~-~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~  131 (241)
                      ....+.|... +.||+|+||.||+|.+  ++..||+|.+....  ......+.+|+.++..+ +||||+++++++...+.
T Consensus        24 ~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~  103 (327)
T 3lm5_A           24 ENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSE  103 (327)
T ss_dssp             HHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred             HhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCe
Confidence            3334556655 8899999999999999  78999999987643  23356789999999999 56999999999999999


Q ss_pred             ceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcC---CCcEEEcc
Q 026214          132 PILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNE---ENVAKMFD  208 (241)
Q Consensus       132 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~---~~~~ki~D  208 (241)
                      .++||||+.+++|.+++...   ....+++..+..++.|++.||.|||   +.+|+||||||+|||++.   ++.+||+|
T Consensus       104 ~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~i~~ql~~~L~~LH---~~givH~Dikp~NIl~~~~~~~~~~kL~D  177 (327)
T 3lm5_A          104 IILILEYAAGGEIFSLCLPE---LAEMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVD  177 (327)
T ss_dssp             EEEEEECCTTEEGGGGGSSC---C-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESCBTTBCCEEECC
T ss_pred             EEEEEEecCCCcHHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCChHHEEEecCCCCCcEEEee
Confidence            99999999999999998554   3456899999999999999999999   999999999999999987   78999999


Q ss_pred             ccCceecCCCCccccceeecCCceeeeecC
Q 026214          209 FSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       209 fG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ||++..+.......    ...++..|++||
T Consensus       178 fg~a~~~~~~~~~~----~~~gt~~y~aPE  203 (327)
T 3lm5_A          178 FGMSRKIGHACELR----EIMGTPEYLAPE  203 (327)
T ss_dssp             GGGCEEC-------------CCCGGGCCHH
T ss_pred             CccccccCCccccc----cccCCcCccCCe
Confidence            99999876543322    123455677887

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.96  E-value=3.6e-29  Score=207.58  Aligned_cols=163  Identities=16%  Similarity=0.154  Sum_probs=136.8

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEec----CCcceE
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLE----TPIPIL  134 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~l  134 (241)
                      .|...+.||+|+||.||+|.+  ++..||+|.+....  ....+.+.+|+.+++.++||||+++++++..    ....++
T Consensus        27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l  106 (290)
T 1t4h_A           27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL  106 (290)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred             eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence            356678899999999999998  78899999987643  2234678999999999999999999999865    356899


Q ss_pred             EEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCC--eEEccCCCCCeeEc-CCCcEEEccccC
Q 026214          135 AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRP--IVYRDFKTAHILFN-EENVAKMFDFSL  211 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~--ivH~dlk~~Nill~-~~~~~ki~DfG~  211 (241)
                      ||||+++++|.+++...     ..+++..+..++.|++.||.|||   +.+  ++|+||||+|||++ .++.+||+|||+
T Consensus       107 v~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~  178 (290)
T 1t4h_A          107 VTELMTSGTLKTYLKRF-----KVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGL  178 (290)
T ss_dssp             EEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTTG
T ss_pred             EEEecCCCCHHHHHHHc-----cCCCHHHHHHHHHHHHHHHHHHH---cCCCCEEECCCCHHHEEEECCCCCEEEeeCCC
Confidence            99999999999999664     45899999999999999999999   888  99999999999997 789999999999


Q ss_pred             ceecCCCCccccceeecCCceeeeecC
Q 026214          212 SISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       212 a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +.........     ...++..|++||
T Consensus       179 ~~~~~~~~~~-----~~~~t~~y~aPE  200 (290)
T 1t4h_A          179 ATLKRASFAK-----AVIGTPEFMAPE  200 (290)
T ss_dssp             GGGCCTTSBE-----ESCSSCCCCCGG
T ss_pred             cccccccccc-----cccCCcCcCCHH
Confidence            9765443221     223455678887

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.96  E-value=1.5e-29  Score=210.48  Aligned_cols=167  Identities=19%  Similarity=0.249  Sum_probs=139.5

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEe
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFE  137 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  137 (241)
                      ++|...+.||+|+||.||+|.+  ++..||+|.+....  ......+.+|+.++++++||||+++++++...+..+++||
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (299)
T 2r3i_A            3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   82 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence            5688889999999999999999  78999999987543  2234678899999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCC
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE  217 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~  217 (241)
                      |+. ++|.+++...   ....+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.+||+|||++..+..
T Consensus        83 ~~~-~~L~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~  155 (299)
T 2r3i_A           83 FLH-QDLKKFMDAS---ALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV  155 (299)
T ss_dssp             CCS-EEHHHHHHHT---TTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCC
T ss_pred             ccc-CCHHHHHHhh---hccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHeEEcCCCCEEECcchhhhhccC
Confidence            998 6999999765   2355899999999999999999999   99999999999999999999999999999987765


Q ss_pred             CCccccceeecCCceeeeecC
Q 026214          218 GGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +.....   ....+..|++||
T Consensus       156 ~~~~~~---~~~~~~~y~aPE  173 (299)
T 2r3i_A          156 PVRTYT---HEVVTLWYRAPE  173 (299)
T ss_dssp             CSBCTT---SCBCCCTTCCHH
T ss_pred             CccccC---cccccccccCcH
Confidence            432221   122355677877

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.96  E-value=6.4e-30  Score=218.49  Aligned_cols=164  Identities=16%  Similarity=0.195  Sum_probs=139.8

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      ++|...+.||+|+||.||+|.+  ++..||+|.+.... ......+.+|+.++..++||||+++++++..++..++||||
T Consensus        33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  112 (360)
T 3eqc_A           33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH  112 (360)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence            5688889999999999999999  78999999987653 22346789999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCC-CeEEccCCCCCeeEcCCCcEEEccccCceecCC
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPR-PIVYRDFKTAHILFNEENVAKMFDFSLSISIPE  217 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~-~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~  217 (241)
                      +++++|.+++...     ..+++..+..++.|++.||.|||   +. +|+|+||||+|||++.++.++|+|||++..+..
T Consensus       113 ~~~~~L~~~l~~~-----~~~~~~~~~~i~~~i~~~l~~lh---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  184 (360)
T 3eqc_A          113 MDGGSLDQVLKKA-----GRIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID  184 (360)
T ss_dssp             CTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH
T ss_pred             CCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HhCCEEcCCccHHHEEECCCCCEEEEECCCCccccc
Confidence            9999999999765     34899999999999999999999   75 899999999999999999999999999976533


Q ss_pred             CCccccceeecCCceeeeecC
Q 026214          218 GGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ...     ....++..|++||
T Consensus       185 ~~~-----~~~~gt~~y~aPE  200 (360)
T 3eqc_A          185 SMA-----NSFVGTRSYMSPE  200 (360)
T ss_dssp             HC---------CCCCTTCCHH
T ss_pred             ccc-----cCCCCCCCeECHH
Confidence            211     1123455677777

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.96  E-value=1.8e-29  Score=212.61  Aligned_cols=165  Identities=18%  Similarity=0.174  Sum_probs=134.9

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC--------cchhhHHHHHHHHHhcCCCceeeEeeEEecCC
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR--------DGHGSCINNIVYAAQMSHDHILKLIGCCLETP  130 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  130 (241)
                      .+.|...+.||+|+||.||+|.+  ++..||||.+.....        .....+.+|+.++..++||||+++++++....
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   88 (322)
T 2ycf_A            9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED   88 (322)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred             hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence            45688899999999999999998  789999999865321        12346889999999999999999999987655


Q ss_pred             cceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCc---EEEc
Q 026214          131 IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENV---AKMF  207 (241)
Q Consensus       131 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~---~ki~  207 (241)
                       .++||||+++++|.+++...     ..+++..+..++.|++.||.|||   +.+++|+||||+|||++.++.   +||+
T Consensus        89 -~~lv~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~  159 (322)
T 2ycf_A           89 -YYIVLELMEGGELFDKVVGN-----KRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKIT  159 (322)
T ss_dssp             -EEEEEECCTTEETHHHHSTT-----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSSSCCEEEC
T ss_pred             -eEEEEecCCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEecCCCCCeEEEc
Confidence             89999999999999999543     45899999999999999999999   999999999999999987654   9999


Q ss_pred             cccCceecCCCCccccceeecCCceeeeecC
Q 026214          208 DFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       208 DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |||++..+.......    ...++..|++||
T Consensus       160 Dfg~~~~~~~~~~~~----~~~gt~~y~aPE  186 (322)
T 2ycf_A          160 DFGHSKILGETSLMR----TLCGTPTYLAPE  186 (322)
T ss_dssp             CCTTCEECCCCHHHH----HHHSCCTTCCHH
T ss_pred             cCccceecccccccc----cccCCcCccCch
Confidence            999999876543211    122345677777

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.96  E-value=2.4e-29  Score=210.79  Aligned_cols=177  Identities=19%  Similarity=0.285  Sum_probs=131.8

Q ss_pred             HHHhcCCCcCCeeecccceEEEEEEE-----CCeEEEEEEeeccCC--cchhhHHHHHHHHHhcCCCceeeEeeEEecCC
Q 026214           58 KLATNNYDQKNVITEDWGCILYKGFW-----QERLISVMRFRESNR--DGHGSCINNIVYAAQMSHDHILKLIGCCLETP  130 (241)
Q Consensus        58 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  130 (241)
                      ....++|...+.||+|+||.||+|.+     ++..||+|.+.....  .....+.+|+.++..++||||+++++++...+
T Consensus        30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~  109 (313)
T 3brb_A           30 VIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMS  109 (313)
T ss_dssp             BCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC--
T ss_pred             ccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecc
Confidence            34556788889999999999999987     345799999875432  23467899999999999999999999998755


Q ss_pred             -----cceEEEeeCCCCCHHHHHhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcE
Q 026214          131 -----IPILAFESVEYGNLRDRILSASQ-PQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVA  204 (241)
Q Consensus       131 -----~~~lv~e~~~~gsL~~~l~~~~~-~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~  204 (241)
                           ..+++|||+++++|.+++..... .....+++..++.++.|++.||.|||   +.+|+|+||||+||+++.++.+
T Consensus       110 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~  186 (313)
T 3brb_A          110 SQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTV  186 (313)
T ss_dssp             -----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCSGGGEEECTTSCE
T ss_pred             ccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcE
Confidence                 35999999999999999964321 13456999999999999999999999   9999999999999999999999


Q ss_pred             EEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          205 KMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       205 ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ||+|||++..+..+...... .....+..|++||
T Consensus       187 kl~Dfg~~~~~~~~~~~~~~-~~~~~~~~y~aPE  219 (313)
T 3brb_A          187 CVADFGLSKKIYSGDYYRQG-RIAKMPVKWIAIE  219 (313)
T ss_dssp             EECSCSCC-----------------CCGGGSCHH
T ss_pred             EEeecCcceecccccccCcc-cccCCCccccCch
Confidence            99999999877654322211 1222334567776

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.96  E-value=2e-29  Score=216.63  Aligned_cols=163  Identities=17%  Similarity=0.196  Sum_probs=130.2

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEecCC------
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLETP------  130 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------  130 (241)
                      .++|...+.||+|+||.||+|.+  ++..||||++....  ......+.+|+.+++.++||||+++++++...+      
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~  103 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  103 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred             hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence            36788899999999999999998  78999999997643  223466889999999999999999999997665      


Q ss_pred             cceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEcccc
Q 026214          131 IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFS  210 (241)
Q Consensus       131 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG  210 (241)
                      ..++||||++ ++|.+.+..       .+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||
T Consensus       104 ~~~lv~e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg  172 (371)
T 2xrw_A          104 DVYIVMELMD-ANLCQVIQM-------ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFG  172 (371)
T ss_dssp             EEEEEEECCS-EEHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCC
T ss_pred             ceEEEEEcCC-CCHHHHHhh-------ccCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEEEee
Confidence            6799999997 589888843       3889999999999999999999   9999999999999999999999999999


Q ss_pred             CceecCCCCccccceeecCCceeeeecC
Q 026214          211 LSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       211 ~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +|+.........    ...++..|+|||
T Consensus       173 ~a~~~~~~~~~~----~~~gt~~y~aPE  196 (371)
T 2xrw_A          173 LARTAGTSFMMT----PYVVTRYYRAPE  196 (371)
T ss_dssp             C--------------------CTTCCHH
T ss_pred             cccccccccccC----CceecCCccCHH
Confidence            998765432211    223455678887

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.96  E-value=3.3e-30  Score=214.54  Aligned_cols=178  Identities=17%  Similarity=0.249  Sum_probs=128.1

Q ss_pred             HHHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceE
Q 026214           58 KLATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPIL  134 (241)
Q Consensus        58 ~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  134 (241)
                      ....++|...+.||+|+||.||+|.+  ++..||+|.+.... ......+.+|+.++..++||||+++++++...+..++
T Consensus        11 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   90 (303)
T 2vwi_A           11 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWL   90 (303)
T ss_dssp             --CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEE
T ss_pred             ccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEE
Confidence            44567899999999999999999998  78999999886543 2345678899999999999999999999999999999


Q ss_pred             EEeeCCCCCHHHHHhhc---CCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccC
Q 026214          135 AFESVEYGNLRDRILSA---SQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL  211 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~---~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~  211 (241)
                      ||||+++++|.+++...   .......+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.+||+|||+
T Consensus        91 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~  167 (303)
T 2vwi_A           91 VMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGV  167 (303)
T ss_dssp             EEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCHH
T ss_pred             EehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCCChhhEEEcCCCCEEEEeccc
Confidence            99999999999999642   1112456899999999999999999999   99999999999999999999999999999


Q ss_pred             ceecCCCCcc--ccceeecCCceeeeecC
Q 026214          212 SISIPEGGTS--GAKCLKSERTEICCVRE  238 (241)
Q Consensus       212 a~~~~~~~~~--~~~~~~~~~~~~~~~~e  238 (241)
                      +..+......  ........++..|++||
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE  196 (303)
T 2vwi_A          168 SAFLATGGDITRNKVRKTFVGTPCWMAPE  196 (303)
T ss_dssp             HHHCC---------------CCCTTCCHH
T ss_pred             hheeccCCCccchhhhcccCCCccccCHH
Confidence            9877554321  11112233455678887

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.96  E-value=2.2e-29  Score=209.00  Aligned_cols=170  Identities=21%  Similarity=0.280  Sum_probs=130.1

Q ss_pred             HHhcCCCcCCeeecccceEEEEEEECCeEEEEEEeeccCC--cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           59 LATNNYDQKNVITEDWGCILYKGFWQERLISVMRFRESNR--DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        59 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      ...+.|...+.||+|+||.||+|.+.+ .||+|.+.....  ...+.+.+|+.+++.++||||+++++++ ..+..++||
T Consensus        21 i~~~~y~~~~~lG~G~~g~Vy~~~~~~-~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~   98 (289)
T 3og7_A           21 IPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVT   98 (289)
T ss_dssp             CCTTSCEEEEEEEECSSEEEEEEESSS-EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEE
T ss_pred             cCccceeeeeEecCCCCeEEEEEEEcC-ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEE
Confidence            345678889999999999999998754 499999875432  2346789999999999999999999965 456789999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||+++++|.+++...    ...+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.++|+|||++....
T Consensus        99 e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~  171 (289)
T 3og7_A           99 QWCEGSSLYHHLHAS----ETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKS  171 (289)
T ss_dssp             ECCCEEEHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEEECCCC------
T ss_pred             EecCCCcHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEECCCCCEEEccceeccccc
Confidence            999999999999654    456899999999999999999999   9999999999999999999999999999998765


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ....... .....++..|++||
T Consensus       172 ~~~~~~~-~~~~~gt~~y~aPE  192 (289)
T 3og7_A          172 RWSGSHQ-FEQLSGSILWMAPE  192 (289)
T ss_dssp             -------------CCCTTCCHH
T ss_pred             ccccccc-ccccCCCccccCch
Confidence            4322111 11223455677887

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.96  E-value=1.5e-29  Score=219.85  Aligned_cols=169  Identities=17%  Similarity=0.133  Sum_probs=123.1

Q ss_pred             CCc-CCeeecccceEEEEEEE----CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEec--CCcceEEE
Q 026214           64 YDQ-KNVITEDWGCILYKGFW----QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLE--TPIPILAF  136 (241)
Q Consensus        64 ~~~-~~~lg~G~~g~Vy~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~  136 (241)
                      |.. .++||+|+||.||+|.+    ++..||+|.+....  ....+.+|+.+++.++||||+++++++..  ....++||
T Consensus        22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~   99 (405)
T 3rgf_A           22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF   99 (405)
T ss_dssp             EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEE
T ss_pred             hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEE
Confidence            443 56899999999999996    47889999987543  34578899999999999999999999954  67899999


Q ss_pred             eeCCCCCHHHHHhhcC----CCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeE----cCCCcEEEcc
Q 026214          137 ESVEYGNLRDRILSAS----QPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILF----NEENVAKMFD  208 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~----~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill----~~~~~~ki~D  208 (241)
                      ||+. ++|.+++....    ......+++..+..++.|++.||.|||   +.+|+||||||+|||+    +.++.+||+|
T Consensus       100 e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~D  175 (405)
T 3rgf_A          100 DYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIAD  175 (405)
T ss_dssp             ECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECCSSTTTTCEEECC
T ss_pred             eCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeCCCcCHHHeEEecCCCCCCcEEEEE
Confidence            9997 58888886321    112335899999999999999999999   9999999999999999    6788999999


Q ss_pred             ccCceecCCCCccccceeecCCceeeeecC
Q 026214          209 FSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       209 fG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ||+|+.+..............++..|+|||
T Consensus       176 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE  205 (405)
T 3rgf_A          176 MGFARLFNSPLKPLADLDPVVVTFWYRAPE  205 (405)
T ss_dssp             TTCCC----------------CCCTTCCHH
T ss_pred             CCCceecCCCCcccccCCCceecCcccCch
Confidence            999998765433333333344566788888

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.96  E-value=9.7e-30  Score=213.08  Aligned_cols=183  Identities=17%  Similarity=0.264  Sum_probs=147.3

Q ss_pred             cCHHHHHHHhcCCCcCCeeecccceEEEEEEE-------CCeEEEEEEeeccCC-cchhhHHHHHHHHHhc-CCCceeeE
Q 026214           52 FSAQELKLATNNYDQKNVITEDWGCILYKGFW-------QERLISVMRFRESNR-DGHGSCINNIVYAAQM-SHDHILKL  122 (241)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l  122 (241)
                      +...++....++|...+.||+|+||.||+|.+       ++..||+|.+..... .....+.+|+.++..+ +||||+++
T Consensus        17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~   96 (316)
T 2xir_A           17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL   96 (316)
T ss_dssp             CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence            45566667778899999999999999999985       458899999976532 2345789999999999 79999999


Q ss_pred             eeEEecCC-cceEEEeeCCCCCHHHHHhhcCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEcc
Q 026214          123 IGCCLETP-IPILAFESVEYGNLRDRILSASQP-----------QTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRD  190 (241)
Q Consensus       123 ~~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~d  190 (241)
                      ++++...+ ..+++|||+++++|.+++......           ....+++..+..++.|++.||.|||   +.+|+|+|
T Consensus        97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~d  173 (316)
T 2xir_A           97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRD  173 (316)
T ss_dssp             EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH---HTTCCCSC
T ss_pred             EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH---hCCccccc
Confidence            99987754 589999999999999999765210           0223889999999999999999999   99999999


Q ss_pred             CCCCCeeEcCCCcEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          191 FKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       191 lk~~Nill~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |||+||+++.++.+||+|||++..+..+..... .....++..|++||
T Consensus       174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~-~~~~~~t~~y~aPE  220 (316)
T 2xir_A          174 LAARNILLSEKNVVKICDFGLARDIYKDPDYVR-KGDARLPLKWMAPE  220 (316)
T ss_dssp             CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEE-ETTEEECGGGCCHH
T ss_pred             CccceEEECCCCCEEECCCccccccccCcccee-ccCCCcceeecCch
Confidence            999999999999999999999987765433211 11112234578887

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.96  E-value=7.7e-30  Score=219.14  Aligned_cols=162  Identities=17%  Similarity=0.191  Sum_probs=121.6

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEecC------C
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLET------P  130 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~  130 (241)
                      .++|...+.||+|+||.||+|.+  ++..||||++....  ....+.+.+|+.+++.++||||+++++++...      .
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~  107 (367)
T 2fst_X           28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN  107 (367)
T ss_dssp             ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence            46788899999999999999998  89999999986542  22346788999999999999999999998654      5


Q ss_pred             cceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEcccc
Q 026214          131 IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFS  210 (241)
Q Consensus       131 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG  210 (241)
                      ..++++|++ +++|.+++..      ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||
T Consensus       108 ~~~lv~e~~-~~~L~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kL~DFG  177 (367)
T 2fst_X          108 DVYLVTHLM-GADLNNIVKC------QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFG  177 (367)
T ss_dssp             CCEEEEECC-CEECC-----------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC--
T ss_pred             eEEEEeccc-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHhhEEECCCCCEEEeecc
Confidence            679999999 5799998843      45899999999999999999999   9999999999999999999999999999


Q ss_pred             CceecCCCCccccceeecCCceeeeecC
Q 026214          211 LSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       211 ~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +++......+      ...++.+|+|||
T Consensus       178 ~a~~~~~~~~------~~~~t~~y~aPE  199 (367)
T 2fst_X          178 LARHTADEMT------GYVATRWYRAPE  199 (367)
T ss_dssp             -------------------CCCTTCCHH
T ss_pred             ccccccccCC------CcCcCcCccChH
Confidence            9987654321      223455688887

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.96  E-value=3.4e-29  Score=213.12  Aligned_cols=168  Identities=15%  Similarity=0.194  Sum_probs=138.1

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC-cchhhHHHHHHHHHhcCCCceeeEeeEEecC-----Ccc
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR-DGHGSCINNIVYAAQMSHDHILKLIGCCLET-----PIP  132 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~  132 (241)
                      .++|...+.||+|+||.||+|.+  ++..||||.+..... .....+.+|+.+++.++||||+++++++...     ...
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   89 (353)
T 2b9h_A           10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV   89 (353)
T ss_dssp             CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred             ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence            46788899999999999999998  789999999975432 2345688999999999999999999988654     678


Q ss_pred             eEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCc
Q 026214          133 ILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS  212 (241)
Q Consensus       133 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a  212 (241)
                      +++|||+. ++|.+++...      .+++..+..++.|++.||.|||   +.+++||||||+|||++.++.+||+|||++
T Consensus        90 ~lv~e~~~-~~L~~~~~~~------~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a  159 (353)
T 2b9h_A           90 YIIQELMQ-TDLHRVISTQ------MLSDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLA  159 (353)
T ss_dssp             EEEECCCS-EEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTC
T ss_pred             EEEEeccC-ccHHHHHhhc------CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEcCCCcEEEEecccc
Confidence            99999997 6999998543      4899999999999999999999   999999999999999999999999999999


Q ss_pred             eecCCCCcccc-------ceeecCCceeeeecC
Q 026214          213 ISIPEGGTSGA-------KCLKSERTEICCVRE  238 (241)
Q Consensus       213 ~~~~~~~~~~~-------~~~~~~~~~~~~~~e  238 (241)
                      ..+........       ......++..|+|||
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  192 (353)
T 2b9h_A          160 RIIDESAADNSEPTGQQSGMVEFVATRWYRAPE  192 (353)
T ss_dssp             EECC----------------CCCCCCGGGCCHH
T ss_pred             cccccccccccCccccccchhhccccccccCCe
Confidence            98765432211       112224566788888

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.96  E-value=8.4e-29  Score=205.41  Aligned_cols=169  Identities=17%  Similarity=0.154  Sum_probs=135.8

Q ss_pred             HhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEE-ecCCcceEEE
Q 026214           60 ATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCC-LETPIPILAF  136 (241)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lv~  136 (241)
                      ..++|...+.||+|+||.||+|.+  ++..||+|.+....  ....+.+|+.++..+.|++++..++.+ ...+..+++|
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~   84 (296)
T 4hgt_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM   84 (296)
T ss_dssp             ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence            447799999999999999999997  88999999876543  335688999999999887766665555 6677889999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeE---cCCCcEEEccccCce
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILF---NEENVAKMFDFSLSI  213 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill---~~~~~~ki~DfG~a~  213 (241)
                      ||+ +++|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||+   +.++.+||+|||+++
T Consensus        85 e~~-~~~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~  156 (296)
T 4hgt_A           85 ELL-GPSLEDLFNFC----SRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK  156 (296)
T ss_dssp             ECC-CCBHHHHHHHT----TSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECCGGGTTCEEECCCTTCE
T ss_pred             Ecc-CCCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeeeeccCCCCeEEEecCccce
Confidence            999 78999999754    345999999999999999999999   9999999999999999   788999999999999


Q ss_pred             ecCCCCccc----cceeecCCceeeeecC
Q 026214          214 SIPEGGTSG----AKCLKSERTEICCVRE  238 (241)
Q Consensus       214 ~~~~~~~~~----~~~~~~~~~~~~~~~e  238 (241)
                      .+.......    .......++..|++||
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  185 (296)
T 4hgt_A          157 KYRDARTHQHIPYRENKNLTGTARYASIN  185 (296)
T ss_dssp             ECBCTTTCCBCCCCCSCCCCSCGGGCCHH
T ss_pred             eccCcccCccCCCCcccccCCCccccchH
Confidence            886654322    1112334556778887

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.96  E-value=2.2e-29  Score=219.96  Aligned_cols=164  Identities=16%  Similarity=0.191  Sum_probs=132.2

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecC------Ccce
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLET------PIPI  133 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~~~  133 (241)
                      ..|...+.||+|+||.||+|.+  ++..||||++....    ....+|+.+++.++||||+++++++...      ...+
T Consensus        54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~  129 (420)
T 1j1b_A           54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN  129 (420)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred             ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence            3578889999999999999999  78999999987543    2234799999999999999999988542      2367


Q ss_pred             EEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCC-CcEEEccccCc
Q 026214          134 LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEE-NVAKMFDFSLS  212 (241)
Q Consensus       134 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~-~~~ki~DfG~a  212 (241)
                      +||||++ ++|.+.+..... ....+++..+..++.|++.||.|||   +.+|+||||||+|||++.+ +.+||+|||+|
T Consensus       130 lv~e~~~-~~l~~~~~~~~~-~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a  204 (420)
T 1j1b_A          130 LVLDYVP-ETVYRVARHYSR-AKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSA  204 (420)
T ss_dssp             EEEECCC-EEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred             eehhccc-ccHHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChhhEEEeCCCCeEEeccchhh
Confidence            8999998 477777653211 2456999999999999999999999   9999999999999999954 67899999999


Q ss_pred             eecCCCCccccceeecCCceeeeecC
Q 026214          213 ISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +.+..+....    ...++..|+|||
T Consensus       205 ~~~~~~~~~~----~~~~t~~y~aPE  226 (420)
T 1j1b_A          205 KQLVRGEPNV----SYICSRYYRAPE  226 (420)
T ss_dssp             EECCTTCCCC----SCCSCTTSCCHH
T ss_pred             hhcccCCCce----eeeeCCCcCCHH
Confidence            9876543322    123456688888

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.96  E-value=4.2e-29  Score=216.18  Aligned_cols=166  Identities=16%  Similarity=0.171  Sum_probs=136.2

Q ss_pred             cCCCcCCeeecccceEEEEEEE-CCeEEEEEEeeccCC--cchhhHHHHHHHHHhcC--CCceeeEeeEEecCCcceEEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW-QERLISVMRFRESNR--DGHGSCINNIVYAAQMS--HDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~lv~  136 (241)
                      ..|...+.||+|+||.||+|.+ ++..||||.+.....  .....+.+|+.++..+.  ||||+++++++...+..++||
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~  135 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM  135 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence            4588899999999999999998 788999999876432  23467899999999996  599999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      | +.+++|.+++...     ..+++..+..++.||+.||.|||   +.+|+||||||+|||++ ++.+||+|||+++.+.
T Consensus       136 E-~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~  205 (390)
T 2zmd_A          136 E-CGNIDLNSWLKKK-----KSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ  205 (390)
T ss_dssp             E-CCSEEHHHHHHHC-----SSCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-
T ss_pred             e-cCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEEE-CCeEEEEecCcccccc
Confidence            9 5568999999765     35889999999999999999999   99999999999999995 5889999999999876


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .+..... .....++..|+|||
T Consensus       206 ~~~~~~~-~~~~~gt~~y~aPE  226 (390)
T 2zmd_A          206 PDTTSVV-KDSQVGAVNYMPPE  226 (390)
T ss_dssp             ---------CCSCCCGGGCCHH
T ss_pred             CCCcccc-CCCCCcCCCccChH
Confidence            5433211 11223566788888

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.96  E-value=1.8e-29  Score=209.03  Aligned_cols=169  Identities=15%  Similarity=0.174  Sum_probs=127.0

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCc-chhh-HHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRD-GHGS-CINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~-~~~~-~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      .++|...+.||+|+||.||+|.+  ++..||+|++...... .... +..+...++.++||||+++++++...+..++||
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~   85 (290)
T 3fme_A            6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM   85 (290)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred             HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence            46688899999999999999999  8999999998764322 2223 344455577889999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCC-CeEEccCCCCCeeEcCCCcEEEccccCceec
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPR-PIVYRDFKTAHILFNEENVAKMFDFSLSISI  215 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~-~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~  215 (241)
                      ||++ ++|.+++..... ....+++..+..++.|++.||.|||   +. +++|+||||+||+++.++.+||+|||++..+
T Consensus        86 e~~~-~~l~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  160 (290)
T 3fme_A           86 ELMD-TSLDKFYKQVID-KGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL  160 (290)
T ss_dssp             ECCS-EEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHH---HHSCCCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred             ehhc-cchHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence            9997 599888764211 2456999999999999999999999   87 9999999999999999999999999999877


Q ss_pred             CCCCccccceeecCCceeeeecC
Q 026214          216 PEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ..+.....    ..++..|++||
T Consensus       161 ~~~~~~~~----~~~t~~y~aPE  179 (290)
T 3fme_A          161 VDDVAKDI----DAGCKPYMAPE  179 (290)
T ss_dssp             -------------CCCCCCSCHH
T ss_pred             cccccccc----cCCCccccChh
Confidence            65433221    23445677887

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.96  E-value=1e-28  Score=216.29  Aligned_cols=164  Identities=17%  Similarity=0.172  Sum_probs=138.7

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhc------CCCceeeEeeEEecCCcc
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQM------SHDHILKLIGCCLETPIP  132 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~l~~~~~~~~~~  132 (241)
                      ...|...+.||+|+||.||+|.+  ++..||||++.... .....+.+|+.++..+      .|+||+++++++...+..
T Consensus        96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  174 (429)
T 3kvw_A           96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI  174 (429)
T ss_dssp             TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred             cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence            35688899999999999999998  78999999987543 2345678888888887      577999999999999999


Q ss_pred             eEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCc--EEEcccc
Q 026214          133 ILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENV--AKMFDFS  210 (241)
Q Consensus       133 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~--~ki~DfG  210 (241)
                      +++|||+. ++|.+++...   ....+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.  +||+|||
T Consensus       175 ~lv~e~~~-~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NILl~~~~~~~vkL~DFG  247 (429)
T 3kvw_A          175 CMTFELLS-MNLYELIKKN---KFQGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFG  247 (429)
T ss_dssp             EEEECCCC-CBHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHH---HHTEECSCCSGGGEEESSTTSCCEEECCCT
T ss_pred             EEEEeccC-CCHHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEccCCCcceEEeecc
Confidence            99999997 6999999776   3445899999999999999999999   999999999999999999887  9999999


Q ss_pred             CceecCCCCccccceeecCCceeeeecC
Q 026214          211 LSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       211 ~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +|.........      ..++..|+|||
T Consensus       248 ~a~~~~~~~~~------~~gt~~y~aPE  269 (429)
T 3kvw_A          248 SSCYEHQRVYT------YIQSRFYRAPE  269 (429)
T ss_dssp             TCEETTCCCCS------SCSCGGGCCHH
T ss_pred             cceecCCcccc------cCCCCCccChH
Confidence            99876543222      23345688887

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.96  E-value=5.6e-29  Score=213.87  Aligned_cols=161  Identities=14%  Similarity=0.177  Sum_probs=133.0

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCc--chhhHHHHHHHHHhcCCCceeeEeeEEecCCcc----
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRD--GHGSCINNIVYAAQMSHDHILKLIGCCLETPIP----  132 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~----  132 (241)
                      .+.|...+.||+|+||.||+|.+  ++..||+|++......  ....+.+|+.+++.++||||+++++++...+..    
T Consensus        41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  120 (371)
T 4exu_A           41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  120 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred             cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence            46788899999999999999998  7999999999764322  246788999999999999999999999877654    


Q ss_pred             --eEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEcccc
Q 026214          133 --ILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFS  210 (241)
Q Consensus       133 --~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG  210 (241)
                        ++||||+. ++|.+.+.       ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||
T Consensus       121 ~~~lv~e~~~-~~l~~~~~-------~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~Dfg  189 (371)
T 4exu_A          121 DFYLVMPFMQ-TDLQKIMG-------MEFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFG  189 (371)
T ss_dssp             CCEEEEECCC-EEHHHHTT-------SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECSTT
T ss_pred             eEEEEEcccc-ccHHHHhh-------cCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCcCHHHeEECCCCCEEEEecC
Confidence              99999997 69988882       33899999999999999999999   9999999999999999999999999999


Q ss_pred             CceecCCCCccccceeecCCceeeeecC
Q 026214          211 LSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       211 ~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +++........      ..++..|+|||
T Consensus       190 ~a~~~~~~~~~------~~~t~~y~aPE  211 (371)
T 4exu_A          190 LARHADAEMTG------YVVTRWYRAPE  211 (371)
T ss_dssp             CC--------C------TTCCCTTSCHH
T ss_pred             cccccccCcCC------cccCccccCHH
Confidence            99876544322      22355677777

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.96  E-value=1.1e-28  Score=210.48  Aligned_cols=176  Identities=11%  Similarity=0.075  Sum_probs=131.9

Q ss_pred             HHHHHHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCc-
Q 026214           55 QELKLATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPI-  131 (241)
Q Consensus        55 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-  131 (241)
                      .......++|...+.||+|+||.||+|.+  ++..||||++.... .....+.+++..+..++||||+++++++...+. 
T Consensus        16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~   94 (360)
T 3e3p_A           16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER   94 (360)
T ss_dssp             HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred             hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence            45566778999999999999999999998  78999999986653 344567888888999999999999999976433 


Q ss_pred             ------ceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcC-CCcE
Q 026214          132 ------PILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNE-ENVA  204 (241)
Q Consensus       132 ------~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~-~~~~  204 (241)
                            .++||||+++ +|.+.+..... ....+++..+..++.|++.||.|||.+ +.+|+||||||+|||++. ++.+
T Consensus        95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~-~~~ivH~Dlkp~NIll~~~~~~~  171 (360)
T 3e3p_A           95 DRRDIYLNVVMEYVPD-TLHRCCRNYYR-RQVAPPPILIKVFLFQLIRSIGCLHLP-SVNVCHRDIKPHNVLVNEADGTL  171 (360)
T ss_dssp             CTTCEEEEEEEECCSC-BHHHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHTST-TTCCBCSCCCGGGEEEETTTTEE
T ss_pred             cccceeEEEEeecccc-cHHHHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHhCC-CCCeecCcCCHHHEEEeCCCCcE
Confidence                  7899999985 66665543211 345688999999999999999999954 679999999999999997 8999


Q ss_pred             EEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          205 KMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       205 ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ||+|||++..+.......    ...++..|+|||
T Consensus       172 kl~Dfg~a~~~~~~~~~~----~~~gt~~y~aPE  201 (360)
T 3e3p_A          172 KLCDFGSAKKLSPSEPNV----AYICSRYYRAPE  201 (360)
T ss_dssp             EECCCTTCBCCCTTSCCC----STTSCGGGCCHH
T ss_pred             EEeeCCCceecCCCCCcc----cccCCcceeCHH
Confidence            999999999876554332    223355688887

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.96  E-value=9.7e-30  Score=209.63  Aligned_cols=171  Identities=15%  Similarity=0.184  Sum_probs=138.7

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC--cchhhHHHHHHHHHhcCCCceeeEeeEEec--CCcceE
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR--DGHGSCINNIVYAAQMSHDHILKLIGCCLE--TPIPIL  134 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~l  134 (241)
                      .++|...+.||+|+||.||++.+  ++..||+|.+.....  ...+.+.+|+.+++.++||||+++++++..  ....++
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   84 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   84 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence            35688889999999999999999  789999999976432  234668999999999999999999998753  567899


Q ss_pred             EEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCC-----eEEccCCCCCeeEcCCCcEEEccc
Q 026214          135 AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRP-----IVYRDFKTAHILFNEENVAKMFDF  209 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~-----ivH~dlk~~Nill~~~~~~ki~Df  209 (241)
                      ||||+++++|.+++..... ....+++..+..++.|++.||.|||   +.+     ++|+||||+||+++.++.+||+||
T Consensus        85 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~df  160 (279)
T 2w5a_A           85 VMEYCEGGDLASVITKGTK-ERQYLDEEFVLRVMTQLTLALKECH---RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDF  160 (279)
T ss_dssp             EEECCTTEEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHH---HHC------CCCCCSGGGEEECSSSCEEECCC
T ss_pred             EEeCCCCCCHHHHHHhhcc-cCCCCCHHHHHHHHHHHHHHHHHHh---cccCCCCeeEEeccchhhEEEcCCCCEEEecC
Confidence            9999999999999976421 2345899999999999999999999   777     999999999999999999999999


Q ss_pred             cCceecCCCCccccceeecCCceeeeecC
Q 026214          210 SLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       210 G~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |++..+..+.....   ...++..|++||
T Consensus       161 g~~~~~~~~~~~~~---~~~~~~~y~aPE  186 (279)
T 2w5a_A          161 GLARILNHDTSFAK---TFVGTPYYMSPE  186 (279)
T ss_dssp             CHHHHC---CHHHH---HHHSCCTTCCHH
T ss_pred             chheeecccccccc---ccCCCccccChH
Confidence            99987765432211   122344567776

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.96  E-value=6.1e-29  Score=215.39  Aligned_cols=164  Identities=15%  Similarity=0.169  Sum_probs=131.6

Q ss_pred             cCCCcCCeeecccceEEEEEEE-CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCC------cceE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW-QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETP------IPIL  134 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~~~l  134 (241)
                      ..|...+.||+|+||.||+|.+ .+..||+|++.....    ...+|+.+++.++||||+++++++...+      ..++
T Consensus        40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l  115 (394)
T 4e7w_A           40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL  115 (394)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred             ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence            4588889999999999999999 666799998865432    2237999999999999999999996543      3789


Q ss_pred             EEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEc-CCCcEEEccccCce
Q 026214          135 AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFN-EENVAKMFDFSLSI  213 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~-~~~~~ki~DfG~a~  213 (241)
                      ||||+++ ++.+.+.... .....+++..+..++.|++.||.|||   +.+|+||||||+|||++ .++.+||+|||+|+
T Consensus       116 v~e~~~~-~l~~~~~~~~-~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~  190 (394)
T 4e7w_A          116 VLEYVPE-TVYRASRHYA-KLKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAK  190 (394)
T ss_dssp             EEECCSE-EHHHHHHHHH-HTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred             EeeccCc-cHHHHHHHHH-hhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEcCCCCcEEEeeCCCcc
Confidence            9999985 5555443211 12456899999999999999999999   99999999999999999 79999999999999


Q ss_pred             ecCCCCccccceeecCCceeeeecC
Q 026214          214 SIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .+..+.....    ..++..|+|||
T Consensus       191 ~~~~~~~~~~----~~~t~~y~aPE  211 (394)
T 4e7w_A          191 ILIAGEPNVS----YICSRYYRAPE  211 (394)
T ss_dssp             ECCTTCCCCS----SCSCGGGCCHH
T ss_pred             cccCCCCCcc----cccCcCccCHH
Confidence            8765543322    23355688887

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.96  E-value=2e-28  Score=203.25  Aligned_cols=168  Identities=17%  Similarity=0.154  Sum_probs=138.4

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEE-ecCCcceEEEe
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCC-LETPIPILAFE  137 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lv~e  137 (241)
                      .++|...+.||+|+||.||+|.+  ++..||+|.+....  ....+.+|+.++..+.|++++..+.++ ...+..+++||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e   85 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME   85 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence            46788899999999999999997  89999999987654  345689999999999888766655555 56678899999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeE---cCCCcEEEccccCcee
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILF---NEENVAKMFDFSLSIS  214 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill---~~~~~~ki~DfG~a~~  214 (241)
                      |+ +++|.+++...    ...+++..+..++.|++.||.|||   +.+|+|+||||+|||+   +.++.+||+|||++..
T Consensus        86 ~~-~~~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~  157 (296)
T 3uzp_A           86 LL-GPSLEDLFNFC----SRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK  157 (296)
T ss_dssp             CC-CCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred             ec-CCCHHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccc
Confidence            99 78999999754    346999999999999999999999   9999999999999999   4788999999999998


Q ss_pred             cCCCCcccc----ceeecCCceeeeecC
Q 026214          215 IPEGGTSGA----KCLKSERTEICCVRE  238 (241)
Q Consensus       215 ~~~~~~~~~----~~~~~~~~~~~~~~e  238 (241)
                      +........    ......++..|++||
T Consensus       158 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE  185 (296)
T 3uzp_A          158 YRDARTHQHIPYRENKNLTGTARYASIN  185 (296)
T ss_dssp             CBCTTTCCBCCCCCSCCCCSCTTTCCHH
T ss_pred             ccccccccccccccccccccccccCChh
Confidence            876543211    112334555678887

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.96  E-value=8.3e-29  Score=227.26  Aligned_cols=172  Identities=20%  Similarity=0.248  Sum_probs=138.9

Q ss_pred             HHHHhcCCCcCCeeecccceEEEEEEE-----CCeEEEEEEeeccCC-cchhhHHHHHHHHHhcCCCceeeEeeEEecCC
Q 026214           57 LKLATNNYDQKNVITEDWGCILYKGFW-----QERLISVMRFRESNR-DGHGSCINNIVYAAQMSHDHILKLIGCCLETP  130 (241)
Q Consensus        57 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  130 (241)
                      .....+.|...+.||+|+||.||+|.+     .+..||+|.+..... ...+.+.+|+.+++.++||||+++++++. ++
T Consensus       385 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~  463 (656)
T 2j0j_A          385 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-EN  463 (656)
T ss_dssp             TBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SS
T ss_pred             cccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cC
Confidence            334456678889999999999999998     246799998875432 23467899999999999999999999985 46


Q ss_pred             cceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEcccc
Q 026214          131 IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFS  210 (241)
Q Consensus       131 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG  210 (241)
                      ..++||||+++|+|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||
T Consensus       464 ~~~lv~E~~~~g~L~~~l~~~----~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDikp~NILl~~~~~vkL~DFG  536 (656)
T 2j0j_A          464 PVWIIMELCTLGELRSFLQVR----KFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFG  536 (656)
T ss_dssp             SCEEEEECCTTCBHHHHHHHT----TTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCC
T ss_pred             ceEEEEEcCCCCcHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchHhEEEeCCCCEEEEecC
Confidence            789999999999999999764    345899999999999999999999   9999999999999999999999999999


Q ss_pred             CceecCCCCccccceeecCCceeeeecC
Q 026214          211 LSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       211 ~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +++.+........  ..+..+..|+|||
T Consensus       537 ~a~~~~~~~~~~~--~~~~~t~~y~aPE  562 (656)
T 2j0j_A          537 LSRYMEDSTYYKA--SKGKLPIKWMAPE  562 (656)
T ss_dssp             CCCSCCC------------CCGGGCCHH
T ss_pred             CCeecCCCcceec--cCCCCCcceeCHH
Confidence            9998755433222  2233445688887

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.96  E-value=2.6e-29  Score=215.80  Aligned_cols=164  Identities=9%  Similarity=0.018  Sum_probs=119.6

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC---cchhhHHHHHHHHHhc--CCCceeeEe-------eEE
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR---DGHGSCINNIVYAAQM--SHDHILKLI-------GCC  126 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l--~h~niv~l~-------~~~  126 (241)
                      ...|...+.||+|+||.||+|.+  ++..||+|++.....   .....+.+|+.++..+  +||||++++       +++
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~  140 (371)
T 3q60_A           61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV  140 (371)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred             ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence            44588899999999999999998  889999999987543   2235567785555555  699988755       444


Q ss_pred             ecC-----------------CcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHH------HHHHHHHHHHHHHHhCCCC
Q 026214          127 LET-----------------PIPILAFESVEYGNLRDRILSASQPQTEPLLMKHR------LKIAMDIAHALAYLHFGFP  183 (241)
Q Consensus       127 ~~~-----------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~------~~i~~~i~~~l~~lH~~~~  183 (241)
                      ..+                 ...++||||++ ++|.+++...    ...+++..+      ..++.|++.||.|||   +
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~----~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH---~  212 (371)
T 3q60_A          141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL----DFVYVFRGDEGILALHILTAQLIRLAANLQ---S  212 (371)
T ss_dssp             EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH----HHSCCCCHHHHHHHHHHHHHHHHHHHHHHH---H
T ss_pred             ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh----ccccchhhhhhhhhHHHHHHHHHHHHHHHH---H
Confidence            332                 23799999998 8999999764    122344445      677899999999999   9


Q ss_pred             CCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          184 RPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       184 ~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .+|+||||||+|||++.++.+||+|||+|+..+....      ....+..|+|||
T Consensus       213 ~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~------~~~~t~~y~aPE  261 (371)
T 3q60_A          213 KGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGP------ASSVPVTYAPRE  261 (371)
T ss_dssp             TTEEETTCSGGGEEECTTSCEEECCGGGEEETTCEEE------GGGSCGGGCCHH
T ss_pred             CCCccCcCCHHHEEECCCCCEEEEecceeeecCCCcc------CccCCcCCcChh
Confidence            9999999999999999999999999999997754321      222336778887

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.96  E-value=2e-29  Score=214.55  Aligned_cols=169  Identities=17%  Similarity=0.164  Sum_probs=132.8

Q ss_pred             hcCCCcCCeeecccceEEEEEEE-----CCeEEEEEEeeccCCc-----------chhhHHHHHHHHHhcCCCceeeEee
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW-----QERLISVMRFRESNRD-----------GHGSCINNIVYAAQMSHDHILKLIG  124 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~l~~  124 (241)
                      .++|...+.||+|+||.||+|.+     ++..+|+|.+......           ....+.+|+..+..++||||+++++
T Consensus        36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~  115 (345)
T 2v62_A           36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG  115 (345)
T ss_dssp             SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred             CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence            35688899999999999999998     4578999998765321           1234677888999999999999999


Q ss_pred             EEec----CCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcC
Q 026214          125 CCLE----TPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNE  200 (241)
Q Consensus       125 ~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~  200 (241)
                      ++..    ....++||||+ +++|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.
T Consensus       116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~  186 (345)
T 2v62_A          116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQN-----GTFKKSTVLQLGIRMLDVLEYIH---ENEYVHGDIKAANLLLGY  186 (345)
T ss_dssp             EEEEESSSCEEEEEEEECE-EEEHHHHCBGG-----GBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEES
T ss_pred             ccccccCCCcEEEEEEecc-CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCcCHHHEEEcc
Confidence            9987    67899999999 89999999654     26999999999999999999999   999999999999999988


Q ss_pred             CC--cEEEccccCceecCCCCcccc----ceeecCCceeeeecC
Q 026214          201 EN--VAKMFDFSLSISIPEGGTSGA----KCLKSERTEICCVRE  238 (241)
Q Consensus       201 ~~--~~ki~DfG~a~~~~~~~~~~~----~~~~~~~~~~~~~~e  238 (241)
                      ++  .+||+|||+|+.+..+.....    ......++..|+|||
T Consensus       187 ~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  230 (345)
T 2v62_A          187 KNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLD  230 (345)
T ss_dssp             SSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHH
T ss_pred             CCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHH
Confidence            77  999999999998865432211    112334556778887

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.96  E-value=1.2e-29  Score=229.20  Aligned_cols=155  Identities=14%  Similarity=0.079  Sum_probs=117.8

Q ss_pred             eecccceEEEEEEE--CCeEEEEEEeeccCC----------cchhhHHHHHHHHHhc-CCCceeeEeeEEecCCcceEEE
Q 026214           70 ITEDWGCILYKGFW--QERLISVMRFRESNR----------DGHGSCINNIVYAAQM-SHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        70 lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~----------~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      .+.|+.|.+..+..  .|..+++|.+.....          ...++|.+|+++|+++ .|+||+++++++.+++..||||
T Consensus       242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM  321 (569)
T 4azs_A          242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM  321 (569)
T ss_dssp             -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred             cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence            34555555555443  778899999876421          1235699999999999 7999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||++|++|.+++...     ++++..   .|+.||+.||.|+|   +++||||||||+||||+.++.+||+|||+|+.+.
T Consensus       322 Eyv~G~~L~d~i~~~-----~~l~~~---~I~~QIl~AL~ylH---~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~  390 (569)
T 4azs_A          322 EKLPGRLLSDMLAAG-----EEIDRE---KILGSLLRSLAALE---KQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTP  390 (569)
T ss_dssp             ECCCSEEHHHHHHTT-----CCCCHH---HHHHHHHHHHHHHH---HTTCEESCCCGGGEEECTTSCEEECCCTTEESCC
T ss_pred             ecCCCCcHHHHHHhC-----CCCCHH---HHHHHHHHHHHHHH---HCCceeccCchHhEEECCCCCEEEeecccCeeCC
Confidence            999999999999654     346654   58899999999999   9999999999999999999999999999999887


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .+.+...+.   .++..|++||
T Consensus       391 ~~~~~~~t~---vGTp~YmAPE  409 (569)
T 4azs_A          391 QDCSWPTNL---VQSFFVFVNE  409 (569)
T ss_dssp             ---CCSHHH---HHHHHHHHHH
T ss_pred             CCCccccCc---eechhhccHH
Confidence            665433221   2445566665

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.96  E-value=1e-28  Score=212.86  Aligned_cols=164  Identities=15%  Similarity=0.199  Sum_probs=136.7

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcC--------CCceeeEeeEEe---
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMS--------HDHILKLIGCCL---  127 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~l~~~~~---  127 (241)
                      .++|...++||+|+||.||+|.+  ++..||+|.+.... .....+.+|+.++..+.        ||||+++++++.   
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~  114 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE-HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG  114 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred             CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC-cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence            46789999999999999999998  78999999987542 34567889999999995        788999999987   


Q ss_pred             -cCCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCC-CeEEccCCCCCeeEcCCC---
Q 026214          128 -ETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPR-PIVYRDFKTAHILFNEEN---  202 (241)
Q Consensus       128 -~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~-~ivH~dlk~~Nill~~~~---  202 (241)
                       .....++||||+. ++|.+.+...   ....+++..+..++.|++.||.|||   +. +|+||||||+|||++.++   
T Consensus       115 ~~~~~~~lv~e~~~-~~l~~~~~~~---~~~~~~~~~~~~i~~qi~~aL~~lH---~~~givHrDikp~NIll~~~~~~~  187 (397)
T 1wak_A          115 VNGTHICMVFEVLG-HHLLKWIIKS---NYQGLPLPCVKKIIQQVLQGLDYLH---TKCRIIHTDIKPENILLSVNEQYI  187 (397)
T ss_dssp             TTEEEEEEEECCCC-CBHHHHHHHT---TTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECCCCSGGGEEECCCHHHH
T ss_pred             CCCceEEEEEeccC-ccHHHHHHhc---ccCCCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHeeEeccchhh
Confidence             5567999999995 6777777654   2356999999999999999999999   87 999999999999998775   


Q ss_pred             ----------------------------------------------cEEEccccCceecCCCCccccceeecCCceeeee
Q 026214          203 ----------------------------------------------VAKMFDFSLSISIPEGGTSGAKCLKSERTEICCV  236 (241)
Q Consensus       203 ----------------------------------------------~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~  236 (241)
                                                                    .+||+|||+|.........      ..++..|+|
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~------~~gt~~y~a  261 (397)
T 1wak_A          188 RRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTE------DIQTRQYRS  261 (397)
T ss_dssp             HHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCS------CCSCGGGCC
T ss_pred             hhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCcc------CCCCCcccC
Confidence                                                          7999999999987644222      234556788


Q ss_pred             cC
Q 026214          237 RE  238 (241)
Q Consensus       237 ~e  238 (241)
                      ||
T Consensus       262 PE  263 (397)
T 1wak_A          262 LE  263 (397)
T ss_dssp             HH
T ss_pred             Ch
Confidence            87

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.96  E-value=2.3e-29  Score=214.66  Aligned_cols=166  Identities=16%  Similarity=0.182  Sum_probs=136.8

Q ss_pred             hcCCCcCCeeecccceEEEEEEE-C---------CeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceee---------
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW-Q---------ERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILK---------  121 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~---------  121 (241)
                      .++|...+.||+|+||.||+|.+ .         +..||+|.+...     ..+.+|+.++.+++||||++         
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~  115 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP  115 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence            36788999999999999999998 2         678999998754     46889999999999999987         


Q ss_pred             ------EeeEEec-CCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCC
Q 026214          122 ------LIGCCLE-TPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTA  194 (241)
Q Consensus       122 ------l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~  194 (241)
                            +++++.. ....++||||+ +++|.+++...   ....+++..+..++.|++.||.|||   +.+|+||||||+
T Consensus       116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~---~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~  188 (352)
T 2jii_A          116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVS---PKHVLSERSVLQVACRLLDALEFLH---ENEYVHGNVTAE  188 (352)
T ss_dssp             TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHS---GGGCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCGG
T ss_pred             ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhC---CcCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHH
Confidence                  5677765 67889999999 89999999764   2356999999999999999999999   999999999999


Q ss_pred             CeeEcCCC--cEEEccccCceecCCCCcccc----ceeecCCceeeeecC
Q 026214          195 HILFNEEN--VAKMFDFSLSISIPEGGTSGA----KCLKSERTEICCVRE  238 (241)
Q Consensus       195 Nill~~~~--~~ki~DfG~a~~~~~~~~~~~----~~~~~~~~~~~~~~e  238 (241)
                      |||++.++  .+||+|||+++.+..+.....    ......++..|++||
T Consensus       189 NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  238 (352)
T 2jii_A          189 NIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMD  238 (352)
T ss_dssp             GEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHH
T ss_pred             HEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHH
Confidence            99999988  899999999988765432211    112224556778887

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.96  E-value=1.1e-28  Score=207.98  Aligned_cols=172  Identities=14%  Similarity=0.136  Sum_probs=128.3

Q ss_pred             HhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC-cchhhHHHHHH-HHHhcCCCceeeEeeEEecCCcceEE
Q 026214           60 ATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR-DGHGSCINNIV-YAAQMSHDHILKLIGCCLETPIPILA  135 (241)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~-~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv  135 (241)
                      ..++|...+.||+|+||.||+|.+  ++..||+|.+..... .....+..|+. +++.++||||+++++++...+..++|
T Consensus        20 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv   99 (327)
T 3aln_A           20 TAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWIC   99 (327)
T ss_dssp             CSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEE
Confidence            346788899999999999999999  799999999976532 23345666666 67777999999999999999999999


Q ss_pred             EeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCC-CeEEccCCCCCeeEcCCCcEEEccccCcee
Q 026214          136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPR-PIVYRDFKTAHILFNEENVAKMFDFSLSIS  214 (241)
Q Consensus       136 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~-~ivH~dlk~~Nill~~~~~~ki~DfG~a~~  214 (241)
                      |||+. ++|.+++..........+++..+..++.|++.||.|||   +. +++|+||||+||+++.++.+||+|||++..
T Consensus       100 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~  175 (327)
T 3aln_A          100 MELMS-TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK---ENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQ  175 (327)
T ss_dssp             ECCCS-EEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH---HHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC
T ss_pred             EeecC-CChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHh---ccCCEeECCCCHHHEEEcCCCCEEEccCCCcee
Confidence            99998 58888886421112456899999999999999999999   88 999999999999999999999999999987


Q ss_pred             cCCCCccccceeecCCceeeeecCC
Q 026214          215 IPEGGTSGAKCLKSERTEICCVREN  239 (241)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~e~  239 (241)
                      +.......    ...++..|++||-
T Consensus       176 ~~~~~~~~----~~~gt~~y~aPE~  196 (327)
T 3aln_A          176 LVDSIAKT----RDAGCRPYMAPER  196 (327)
T ss_dssp             -------------------------
T ss_pred             cccccccc----cCCCCccccCcee
Confidence            75443221    1234556888873

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.95  E-value=4e-28  Score=215.34  Aligned_cols=168  Identities=15%  Similarity=0.143  Sum_probs=139.5

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCC-CceeeEeeEEecCCcceEEEe
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSH-DHILKLIGCCLETPIPILAFE  137 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv~e  137 (241)
                      .++|...++||+|+||.||+|.+  ++..||||.+....  ....+.+|+.++..+.| +++..+..++...+..++|||
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme   83 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT--KHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD   83 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTC--SSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccc--ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence            46789999999999999999998  78999999877653  34568999999999976 566667777778888999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeE---cCCCcEEEccccCcee
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILF---NEENVAKMFDFSLSIS  214 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill---~~~~~~ki~DfG~a~~  214 (241)
                      |+ +++|.+++...    ...+++..++.++.||+.||.|||   +.+|+||||||+||||   +.++.+||+|||+++.
T Consensus        84 ~~-g~sL~~ll~~~----~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~  155 (483)
T 3sv0_A           84 LL-GPSLEDLFNFC----SRKLSLKTVLMLADQMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKK  155 (483)
T ss_dssp             CC-CCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred             CC-CCCHHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCcceEEEecCCCCCeEEEEeCCccee
Confidence            99 78999999764    345999999999999999999999   9999999999999999   6889999999999998


Q ss_pred             cCCCCcccc----ceeecCCceeeeecC
Q 026214          215 IPEGGTSGA----KCLKSERTEICCVRE  238 (241)
Q Consensus       215 ~~~~~~~~~----~~~~~~~~~~~~~~e  238 (241)
                      +........    ......++..|++||
T Consensus       156 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE  183 (483)
T 3sv0_A          156 YRDTSTHQHIPYRENKNLTGTARYASVN  183 (483)
T ss_dssp             CBCTTTCCBCCCCCCCCCCSCTTTCCHH
T ss_pred             ccCCccccccccccccccCCCccccCHH
Confidence            876543221    111334555677887

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.95  E-value=2e-28  Score=206.02  Aligned_cols=168  Identities=20%  Similarity=0.236  Sum_probs=138.4

Q ss_pred             HhcCCCcCCeeecccceEEEEEEE---CCeEEEEEEeeccC--CcchhhHHHHHHHHHhc---CCCceeeEeeEEe----
Q 026214           60 ATNNYDQKNVITEDWGCILYKGFW---QERLISVMRFRESN--RDGHGSCINNIVYAAQM---SHDHILKLIGCCL----  127 (241)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~---~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~----  127 (241)
                      ..+.|...+.||+|+||.||+|.+   ++..||+|.+....  ......+.+|+.+++.+   .||||+++++++.    
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~   88 (326)
T 1blx_A            9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT   88 (326)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred             chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence            457799999999999999999998   57899999987543  22345677888887777   8999999999987    


Q ss_pred             -cCCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEE
Q 026214          128 -ETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKM  206 (241)
Q Consensus       128 -~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki  206 (241)
                       .....+++|||+. ++|.+++...   ....+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.+||
T Consensus        89 ~~~~~~~lv~e~~~-~~L~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~lH---~~gi~H~dlkp~Nili~~~~~~kl  161 (326)
T 1blx_A           89 DRETKLTLVFEHVD-QDLTTYLDKV---PEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKL  161 (326)
T ss_dssp             SSEEEEEEEEECCS-CBHHHHHHHS---CTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEE
T ss_pred             CCCceEEEEEecCC-CCHHHHHHhc---ccCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHHHeEEcCCCCEEE
Confidence             4567899999998 6999999775   2345899999999999999999999   999999999999999999999999


Q ss_pred             ccccCceecCCCCccccceeecCCceeeeecC
Q 026214          207 FDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       207 ~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +|||++..+......    ....++..|++||
T Consensus       162 ~Dfg~~~~~~~~~~~----~~~~~~~~y~aPE  189 (326)
T 1blx_A          162 ADFGLARIYSFQMAL----TSVVVTLWYRAPE  189 (326)
T ss_dssp             CSCCSCCCCCGGGGG----CCCCCCCTTCCHH
T ss_pred             ecCcccccccCCCCc----cccccccceeCHH
Confidence            999999876543211    1223455677877

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.95  E-value=2.5e-28  Score=205.90  Aligned_cols=164  Identities=16%  Similarity=0.162  Sum_probs=138.5

Q ss_pred             hcCCCcCCeeecccceEEEEEEE---CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCc------eeeEeeEEecCCc
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW---QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDH------ILKLIGCCLETPI  131 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~~~  131 (241)
                      .+.|...+.||+|+||.||+|.+   ++..||+|.+.... .....+.+|+.++..++|++      ++++++++...+.
T Consensus        13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~   91 (339)
T 1z57_A           13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH   91 (339)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred             cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence            35788899999999999999987   68899999987543 34567889999999997665      9999999999999


Q ss_pred             ceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcC-----------
Q 026214          132 PILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNE-----------  200 (241)
Q Consensus       132 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~-----------  200 (241)
                      .++||||+ +++|.+++...   ...++++..+..++.|++.||.|||   +.+|+||||||+|||++.           
T Consensus        92 ~~lv~e~~-~~~l~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~  164 (339)
T 1z57_A           92 ICIVFELL-GLSTYDFIKEN---GFLPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEAYNPKI  164 (339)
T ss_dssp             EEEEEECC-CCBHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCCCEEEEEC---
T ss_pred             EEEEEcCC-CCCHHHHHHhc---CCCCCcHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeccccccccCCcc
Confidence            99999999 68999999775   3346899999999999999999999   999999999999999987           


Q ss_pred             --------CCcEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          201 --------ENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       201 --------~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                              ++.+||+|||++.........      ..++..|+|||
T Consensus       165 ~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~------~~gt~~y~aPE  204 (339)
T 1z57_A          165 KRDERTLINPDIKVVDFGSATYDDEHHST------LVSTRHYRAPE  204 (339)
T ss_dssp             -CEEEEESCCCEEECCCSSCEETTSCCCS------SCSCGGGCCHH
T ss_pred             ccccccccCCCceEeeCcccccCcccccc------ccCCccccChH
Confidence                    668999999999876544322      22345677887

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.95  E-value=6.5e-29  Score=229.06  Aligned_cols=160  Identities=21%  Similarity=0.254  Sum_probs=134.5

Q ss_pred             hcCCCcCCeeecccceEEEEEEE---CCeEEEEEEeeccCC-cchhhHHHHHHHHHhcCCCceeeEeeEEecCCc-----
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW---QERLISVMRFRESNR-DGHGSCINNIVYAAQMSHDHILKLIGCCLETPI-----  131 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~---~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-----  131 (241)
                      .++|...+.||+|+||.||+|.+   +++.||||.+..... .....+.+|+.++..++||||+++++++...+.     
T Consensus        79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~  158 (681)
T 2pzi_A           79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV  158 (681)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence            37799999999999999999998   589999999865432 234568899999999999999999999987665     


Q ss_pred             ceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccC
Q 026214          132 PILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL  211 (241)
Q Consensus       132 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~  211 (241)
                      .|+||||+++++|.+++..       .+++..+..++.|++.||.|||   +.+|+||||||+|||++.+ .+||+|||+
T Consensus       159 ~~lv~E~~~g~~L~~~~~~-------~l~~~~~~~~~~qi~~aL~~lH---~~giiHrDlkp~NIll~~~-~~kl~DFG~  227 (681)
T 2pzi_A          159 GYIVMEYVGGQSLKRSKGQ-------KLPVAEAIAYLLEILPALSYLH---SIGLVYNDLKPENIMLTEE-QLKLIDLGA  227 (681)
T ss_dssp             EEEEEECCCCEECC----C-------CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSS-CEEECCCTT
T ss_pred             eEEEEEeCCCCcHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHH---HCCCeecccChHHeEEeCC-cEEEEeccc
Confidence            6999999999999987722       5999999999999999999999   9999999999999999875 899999999


Q ss_pred             ceecCCCCccccceeecCCceeeeecC
Q 026214          212 SISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       212 a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ++.+.....       ..++..|++||
T Consensus       228 a~~~~~~~~-------~~gt~~y~aPE  247 (681)
T 2pzi_A          228 VSRINSFGY-------LYGTPGFQAPE  247 (681)
T ss_dssp             CEETTCCSC-------CCCCTTTSCTT
T ss_pred             chhcccCCc-------cCCCccccCHH
Confidence            998765421       12455688888

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.95  E-value=1.3e-28  Score=209.85  Aligned_cols=161  Identities=14%  Similarity=0.161  Sum_probs=133.3

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC--cchhhHHHHHHHHHhcCCCceeeEeeEEecCCc-----
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR--DGHGSCINNIVYAAQMSHDHILKLIGCCLETPI-----  131 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-----  131 (241)
                      .++|...+.||+|+||.||+|.+  ++..||||.+.....  .....+.+|+.+++.++||||+++++++.....     
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~  102 (353)
T 3coi_A           23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  102 (353)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence            35688889999999999999998  799999999876432  224678899999999999999999999987654     


Q ss_pred             -ceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEcccc
Q 026214          132 -PILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFS  210 (241)
Q Consensus       132 -~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG  210 (241)
                       .+++|||+. ++|.+++.       ..+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.+||+|||
T Consensus       103 ~~~lv~e~~~-~~l~~~~~-------~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg  171 (353)
T 3coi_A          103 DFYLVMPFMQ-TDLQKIMG-------LKFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFG  171 (353)
T ss_dssp             CCEEEEECCS-EEGGGTTT-------SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTCCEEECSTT
T ss_pred             eEEEEecccc-CCHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEeECCCCcEEEeecc
Confidence             499999997 68888772       34899999999999999999999   9999999999999999999999999999


Q ss_pred             CceecCCCCccccceeecCCceeeeecC
Q 026214          211 LSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       211 ~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ++........      ....+..|++||
T Consensus       172 ~~~~~~~~~~------~~~~t~~y~aPE  193 (353)
T 3coi_A          172 LARHADAEMT------GYVVTRWYRAPE  193 (353)
T ss_dssp             CTTC--------------CCSBCCSCHH
T ss_pred             cccCCCCCcc------ccccCcCcCCHH
Confidence            9987654322      123455678887

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.95  E-value=1.3e-29  Score=222.08  Aligned_cols=168  Identities=19%  Similarity=0.224  Sum_probs=130.1

Q ss_pred             HhcCCCcCCeeecccceEE-EEEEECCeEEEEEEeeccCCcchhhHHHHHHHHHhc-CCCceeeEeeEEecCCcceEEEe
Q 026214           60 ATNNYDQKNVITEDWGCIL-YKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQM-SHDHILKLIGCCLETPIPILAFE  137 (241)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~V-y~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e  137 (241)
                      ....|...+.||+|+||+| |++..+++.||||++....   ...+.+|+.++..+ +||||+++++++.+....++|||
T Consensus        22 ~~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E   98 (432)
T 3p23_A           22 GKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIE   98 (432)
T ss_dssp             TTEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT---EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ccEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEE
Confidence            3456888899999999985 4455599999999986543   24467899999999 89999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcC-----CCcEEEccccCc
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNE-----ENVAKMFDFSLS  212 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~-----~~~~ki~DfG~a  212 (241)
                      |+. |+|.+++....    ....+..+..++.|++.||.|||   +.+|+||||||+|||++.     ...+||+|||+|
T Consensus        99 ~~~-g~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a  170 (432)
T 3p23_A           99 LCA-ATLQEYVEQKD----FAHLGLEPITLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLC  170 (432)
T ss_dssp             CCS-EEHHHHHHSSS----CCCCSSCHHHHHHHHHHHHHHHH---HTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEE
T ss_pred             CCC-CCHHHHHHhcC----CCccchhHHHHHHHHHHHHHHHH---HCcCEeCCCCHHHEEEecCCCCCceeEEEecccce
Confidence            997 69999997652    23444456789999999999999   999999999999999943     346889999999


Q ss_pred             eecCCCCccccceeecCCceeeeecC
Q 026214          213 ISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +.+..+...........++..|+|||
T Consensus       171 ~~~~~~~~~~~~~~~~~gt~~y~APE  196 (432)
T 3p23_A          171 KKLAVGRHSFSRRSGVPGTEGWIAPE  196 (432)
T ss_dssp             ECC------------CCSCTTSCCGG
T ss_pred             eeccCCCcceeeccccCCCcCccChh
Confidence            98876544433334445677889998

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.95  E-value=6.5e-29  Score=208.06  Aligned_cols=170  Identities=16%  Similarity=0.202  Sum_probs=133.4

Q ss_pred             HHHHHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC------cchhhHHHHHHHHHhc----CCCceeeEe
Q 026214           56 ELKLATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR------DGHGSCINNIVYAAQM----SHDHILKLI  123 (241)
Q Consensus        56 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l----~h~niv~l~  123 (241)
                      +.....++|...+.||+|+||.||+|.+  ++..||+|.+.....      .....+.+|+.++.++    +||||++++
T Consensus        25 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~  104 (312)
T 2iwi_A           25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLL  104 (312)
T ss_dssp             --------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEE
T ss_pred             chhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEE
Confidence            4455567899999999999999999998  788999999876432      1234567899999999    899999999


Q ss_pred             eEEecCCcceEEEee-CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEc-CC
Q 026214          124 GCCLETPIPILAFES-VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFN-EE  201 (241)
Q Consensus       124 ~~~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~-~~  201 (241)
                      +++...+..++++|+ +.+++|.+++...     ..+++..+..++.|++.||.|||   +.+++|+||||+||+++ .+
T Consensus       105 ~~~~~~~~~~~v~e~~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~  176 (312)
T 2iwi_A          105 DWFETQEGFMLVLERPLPAQDLFDYITEK-----GPLGEGPSRCFFGQVVAAIQHCH---SRGVVHRDIKDENILIDLRR  176 (312)
T ss_dssp             EEC-----CEEEEECCSSEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HHTEECCCCSGGGEEEETTT
T ss_pred             EEEecCCeEEEEEEecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChhhEEEeCCC
Confidence            999999999999999 7889999999765     34899999999999999999999   99999999999999999 88


Q ss_pred             CcEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          202 NVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       202 ~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +.+||+|||++..+......     ...++..|++||
T Consensus       177 ~~~kl~dfg~~~~~~~~~~~-----~~~~~~~y~aPE  208 (312)
T 2iwi_A          177 GCAKLIDFGSGALLHDEPYT-----DFDGTRVYSPPE  208 (312)
T ss_dssp             TEEEECCCSSCEECCSSCBC-----CCCSCTTTSCHH
T ss_pred             CeEEEEEcchhhhcccCccc-----ccCCcccccCce
Confidence            99999999999987654322     122445577777

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.95  E-value=2.3e-28  Score=202.52  Aligned_cols=167  Identities=17%  Similarity=0.213  Sum_probs=141.4

Q ss_pred             HhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEE
Q 026214           60 ATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA  135 (241)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  135 (241)
                      ..+.|...+.||+|+||.||+|.+  ++..||+|.+....  ......+.+|+.++++++||||+++++++...+..+++
T Consensus        20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   99 (287)
T 2wei_A           20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV   99 (287)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence            346688999999999999999999  78999999987543  23457789999999999999999999999999999999


Q ss_pred             EeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCC---CcEEEccccCc
Q 026214          136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEE---NVAKMFDFSLS  212 (241)
Q Consensus       136 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~---~~~ki~DfG~a  212 (241)
                      +||+++++|.+.+...     ..+++..+..++.|++.||.|||   +.+++|+||+|+||+++.+   +.+||+|||++
T Consensus       100 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~  171 (287)
T 2wei_A          100 GELYTGGELFDEIIKR-----KRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS  171 (287)
T ss_dssp             ECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECSTTGG
T ss_pred             EEccCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChhhEEEecCCCcccEEEeccCcc
Confidence            9999999999998664     34899999999999999999999   9999999999999999754   47999999999


Q ss_pred             eecCCCCccccceeecCCceeeeecC
Q 026214          213 ISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ...........    ..++..|++||
T Consensus       172 ~~~~~~~~~~~----~~~~~~y~aPE  193 (287)
T 2wei_A          172 TCFQQNTKMKD----RIGTAYYIAPE  193 (287)
T ss_dssp             GTBCCCSSCSC----HHHHHTTCCHH
T ss_pred             eeecCCCcccc----ccCcccccChH
Confidence            87755432221    12344567776

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.95  E-value=5.7e-29  Score=209.94  Aligned_cols=175  Identities=19%  Similarity=0.192  Sum_probs=137.4

Q ss_pred             HhcCCCcCCeeecccceEEEEEEE-------CCeEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCc
Q 026214           60 ATNNYDQKNVITEDWGCILYKGFW-------QERLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPI  131 (241)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  131 (241)
                      ..++|...+.||+|+||.||+|.+       ++..||+|.+.... ......+.+|+.++..++||||+++++++...+.
T Consensus        28 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  107 (327)
T 2yfx_A           28 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP  107 (327)
T ss_dssp             CGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             ChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC
Confidence            346788899999999999999983       56789999987543 2334678999999999999999999999999999


Q ss_pred             ceEEEeeCCCCCHHHHHhhcCC--CCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcC---CCcEEE
Q 026214          132 PILAFESVEYGNLRDRILSASQ--PQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNE---ENVAKM  206 (241)
Q Consensus       132 ~~lv~e~~~~gsL~~~l~~~~~--~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~---~~~~ki  206 (241)
                      .++||||+++++|.+++.....  .....+++..++.++.|++.||.|||   +.+++|+||||+|||++.   +..++|
T Consensus       108 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~i~H~dlkp~NIli~~~~~~~~~kl  184 (327)
T 2yfx_A          108 RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKI  184 (327)
T ss_dssp             CEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred             cEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeecCcCCHhHEEEecCCCcceEEE
Confidence            9999999999999999987532  12245899999999999999999999   999999999999999984   456999


Q ss_pred             ccccCceecCCCCccccceeecCCceeeeecC
Q 026214          207 FDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       207 ~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +|||++..+........ ......+..|++||
T Consensus       185 ~Dfg~~~~~~~~~~~~~-~~~~~~~~~y~aPE  215 (327)
T 2yfx_A          185 GDFGMARDIYRASYYRK-GGCAMLPVKWMPPE  215 (327)
T ss_dssp             CCCHHHHHHHC-------CCGGGSCGGGCCHH
T ss_pred             Ccccccccccccccccc-CCCcCCCcceeCHh
Confidence            99999986644322111 11222344677887

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.95  E-value=1.7e-28  Score=206.79  Aligned_cols=172  Identities=15%  Similarity=0.175  Sum_probs=142.5

Q ss_pred             HHHHHHHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCc------chhhHHHHHHHHHhcC--CCceeeEe
Q 026214           54 AQELKLATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRD------GHGSCINNIVYAAQMS--HDHILKLI  123 (241)
Q Consensus        54 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--h~niv~l~  123 (241)
                      ..+.....++|...+.||+|+||.||+|.+  ++..||+|.+......      ....+.+|+.++..+.  ||||++++
T Consensus        35 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~  114 (320)
T 3a99_A           35 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLL  114 (320)
T ss_dssp             -----CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEE
T ss_pred             ccccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEE
Confidence            344455667899999999999999999998  8899999999765322      2356788999999996  59999999


Q ss_pred             eEEecCCcceEEEeeCCC-CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEc-CC
Q 026214          124 GCCLETPIPILAFESVEY-GNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFN-EE  201 (241)
Q Consensus       124 ~~~~~~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~-~~  201 (241)
                      +++...+..++++|++.+ ++|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++ .+
T Consensus       115 ~~~~~~~~~~lv~e~~~~~~~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~  186 (320)
T 3a99_A          115 DWFERPDSFVLILERPEPVQDLFDFITER-----GALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNR  186 (320)
T ss_dssp             EEEECSSEEEEEEECCSSEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTT
T ss_pred             EEEecCCcEEEEEEcCCCCccHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcEeCCCCHHHEEEeCCC
Confidence            999999999999999975 8999999664     35899999999999999999999   99999999999999999 78


Q ss_pred             CcEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          202 NVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       202 ~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +.+||+|||++..+......     ...++..|++||
T Consensus       187 ~~~kL~Dfg~~~~~~~~~~~-----~~~gt~~y~aPE  218 (320)
T 3a99_A          187 GELKLIDFGSGALLKDTVYT-----DFDGTRVYSPPE  218 (320)
T ss_dssp             TEEEECCCTTCEECCSSCBC-----CCCSCGGGSCHH
T ss_pred             CCEEEeeCcccccccccccc-----CCCCCccCCChH
Confidence            99999999999987654322     123455688887

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.95  E-value=5.7e-28  Score=200.70  Aligned_cols=141  Identities=6%  Similarity=-0.022  Sum_probs=126.2

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCc---chhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRD---GHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      +.|...+.||+|+||.||+|.+  +++.||+|.+......   ....+.+|+.++..++||||+++++++...+..++||
T Consensus        31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  110 (286)
T 3uqc_A           31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA  110 (286)
T ss_dssp             TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence            6699999999999999999999  6899999999865432   2367899999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCc
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS  212 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a  212 (241)
                      ||+++++|.+++...       .....+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+++|..
T Consensus       111 e~~~g~~L~~~l~~~-------~~~~~~~~i~~ql~~aL~~lH---~~givH~Dikp~NIll~~~g~~kl~~~~~~  176 (286)
T 3uqc_A          111 EWIRGGSLQEVADTS-------PSPVGAIRAMQSLAAAADAAH---RAGVALSIDHPSRVRVSIDGDVVLAYPATM  176 (286)
T ss_dssp             ECCCEEEHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEETTSCEEECSCCCC
T ss_pred             EecCCCCHHHHHhcC-------CChHHHHHHHHHHHHHHHHHH---HCCCccCCCCcccEEEcCCCCEEEEecccc
Confidence            999999999999332       355678889999999999999   999999999999999999999999987764

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.95  E-value=6.5e-28  Score=204.62  Aligned_cols=163  Identities=18%  Similarity=0.266  Sum_probs=121.2

Q ss_pred             HhcCCCcC-CeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHH-HHHHhcCCCceeeEeeEEec----CCc
Q 026214           60 ATNNYDQK-NVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNI-VYAAQMSHDHILKLIGCCLE----TPI  131 (241)
Q Consensus        60 ~~~~~~~~-~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~-~~l~~l~h~niv~l~~~~~~----~~~  131 (241)
                      ..++|... +.||+|+||.||+|.+  ++..||+|++....     ...+|+ ..+..+.||||+++++++..    ...
T Consensus        26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~  100 (336)
T 3fhr_A           26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRC  100 (336)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred             ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCce
Confidence            34567774 5699999999999999  78999999986532     223333 34566799999999999876    445


Q ss_pred             ceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcC---CCcEEEcc
Q 026214          132 PILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNE---ENVAKMFD  208 (241)
Q Consensus       132 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~---~~~~ki~D  208 (241)
                      .++||||+++|+|.+++...   ....+++..+..++.|++.||.|||   +.+|+||||||+|||++.   ++.+||+|
T Consensus       101 ~~lv~e~~~gg~L~~~l~~~---~~~~l~~~~~~~i~~ql~~~l~~LH---~~~ivH~dlkp~NIll~~~~~~~~~kl~D  174 (336)
T 3fhr_A          101 LLIIMECMEGGELFSRIQER---GDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTD  174 (336)
T ss_dssp             EEEEEECCTTEEHHHHHHTC----CCCCBHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECC
T ss_pred             EEEEEeccCCCCHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEEecCCCceEEEec
Confidence            89999999999999999765   2356999999999999999999999   999999999999999976   45699999


Q ss_pred             ccCceecCCCCccccceeecCCceeeeecC
Q 026214          209 FSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       209 fG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ||++.........     ...++..|++||
T Consensus       175 fg~~~~~~~~~~~-----~~~~t~~y~aPE  199 (336)
T 3fhr_A          175 FGFAKETTQNALQ-----TPCYTPYYVAPE  199 (336)
T ss_dssp             CTTCEEC-----------------------
T ss_pred             cccceeccccccc-----cCCCCcCccChh
Confidence            9999876543221     123356788888

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.95  E-value=2.4e-29  Score=211.09  Aligned_cols=177  Identities=16%  Similarity=0.230  Sum_probs=139.9

Q ss_pred             CHHHHHHHhcCCCcCCeeecccceEEEEEEECCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEecCC
Q 026214           53 SAQELKLATNNYDQKNVITEDWGCILYKGFWQERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLETP  130 (241)
Q Consensus        53 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  130 (241)
                      ...++....++|...+.||+|+||.||+|.+.+ .+|+|.+....  ....+.+.+|+.++..++||||+++++++...+
T Consensus        24 ~~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~-~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~  102 (319)
T 2y4i_B           24 FLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG-EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPP  102 (319)
T ss_dssp             CGGGSSSCCSCEECCCBCCCSSSSEEEEEEESS-SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSS
T ss_pred             ccccccCCHHHeEEeeEeccCCceEEEEEEEcC-eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC
Confidence            344555567889999999999999999999854 49999886542  233466888999999999999999999999999


Q ss_pred             cceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEcccc
Q 026214          131 IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFS  210 (241)
Q Consensus       131 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG  210 (241)
                      ..+++|||+++++|.+++...    ...+++..+..++.|++.||.|||   +.+++|+||||+||+++ ++.++|+|||
T Consensus       103 ~~~iv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~NIl~~-~~~~~l~Dfg  174 (319)
T 2y4i_B          103 HLAIITSLCKGRTLYSVVRDA----KIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVITDFG  174 (319)
T ss_dssp             CEEEECBCCCSEEHHHHTTSS----CCCCCSHHHHHHHHHHHHHHHHHH---HTTCCCCCCCSTTEEEC---CCEECCCS
T ss_pred             ceEEEeecccCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChhhEEEe-CCCEEEeecC
Confidence            999999999999999999654    346899999999999999999999   99999999999999998 6799999999


Q ss_pred             CceecCCCCc--cccceeecCCceeeeecC
Q 026214          211 LSISIPEGGT--SGAKCLKSERTEICCVRE  238 (241)
Q Consensus       211 ~a~~~~~~~~--~~~~~~~~~~~~~~~~~e  238 (241)
                      ++........  .........++..|++||
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE  204 (319)
T 2y4i_B          175 LFSISGVLQAGRREDKLRIQNGWLCHLAPE  204 (319)
T ss_dssp             CCC----------CCSCBCCSGGGGTSCHH
T ss_pred             CccccccccccccccccccCCCcccccChH
Confidence            9887643221  112222333555677877

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.95  E-value=1.1e-28  Score=206.81  Aligned_cols=178  Identities=16%  Similarity=0.166  Sum_probs=138.9

Q ss_pred             cccCHHHHHHHhcCCCcCCeeecccceEEEEEEE-CCeEEEEEEeeccCC--cchhhHHHHHHHHHhcC--CCceeeEee
Q 026214           50 RIFSAQELKLATNNYDQKNVITEDWGCILYKGFW-QERLISVMRFRESNR--DGHGSCINNIVYAAQMS--HDHILKLIG  124 (241)
Q Consensus        50 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~--h~niv~l~~  124 (241)
                      +.+.+..+....+.|...+.||+|+||.||++.+ ++..||+|.+.....  .....+.+|+.++..+.  ||||+++++
T Consensus        16 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~   95 (313)
T 3cek_A           16 ENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD   95 (313)
T ss_dssp             ----CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEE
T ss_pred             CCCCeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEE
Confidence            3344445555667799999999999999999998 788999999875432  23467899999999996  599999999


Q ss_pred             EEecCCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcE
Q 026214          125 CCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVA  204 (241)
Q Consensus       125 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~  204 (241)
                      ++...+..+++|| +.+++|.+++...     ..+++..+..++.|++.||.|||   +.+++|+||||+|||+++ +.+
T Consensus        96 ~~~~~~~~~lv~e-~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~-~~~  165 (313)
T 3cek_A           96 YEITDQYIYMVME-CGNIDLNSWLKKK-----KSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVD-GML  165 (313)
T ss_dssp             EEECSSEEEEEEC-CCSEEHHHHHHHC-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEET-TEE
T ss_pred             EeecCCEEEEEEe-cCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEEEC-CeE
Confidence            9999999999999 5568999999764     35899999999999999999999   999999999999999965 899


Q ss_pred             EEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          205 KMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       205 ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ||+|||++..+........ .....++..|+|||
T Consensus       166 kL~Dfg~~~~~~~~~~~~~-~~~~~gt~~y~aPE  198 (313)
T 3cek_A          166 KLIDFGIANQMQPDTTSVV-KDSQVGTVNYMPPE  198 (313)
T ss_dssp             EECCCSSSCC---------------CCGGGCCHH
T ss_pred             EEeeccccccccCcccccc-ccCCCCCCCcCCHH
Confidence            9999999998765433211 11223456778887

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.95  E-value=1.7e-27  Score=205.28  Aligned_cols=169  Identities=17%  Similarity=0.174  Sum_probs=139.2

Q ss_pred             HHHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcC-CC-----ceeeEeeEEecC
Q 026214           58 KLATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMS-HD-----HILKLIGCCLET  129 (241)
Q Consensus        58 ~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l~~~~~~~  129 (241)
                      ....++|...+.||+|+||.||+|.+  ++..||||++.... .....+.+|+.++..+. |+     +|+++.+++...
T Consensus        50 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  128 (382)
T 2vx3_A           50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFR  128 (382)
T ss_dssp             CEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEET
T ss_pred             CEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccC
Confidence            34457899999999999999999998  78999999987542 23466788899988884 55     499999999999


Q ss_pred             CcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEc--CCCcEEEc
Q 026214          130 PIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFN--EENVAKMF  207 (241)
Q Consensus       130 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~--~~~~~ki~  207 (241)
                      +..++||||++ ++|.+++...   ....+++..+..++.|++.||.|||++ ..+|+||||||+|||++  .++.+||+
T Consensus       129 ~~~~lv~e~~~-~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~  203 (382)
T 2vx3_A          129 NHLCLVFEMLS-YNLYDLLRNT---NFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIV  203 (382)
T ss_dssp             TEEEEEEECCC-CBHHHHHHHT---TTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEEC
T ss_pred             CceEEEEecCC-CCHHHHHhhc---CcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEE
Confidence            99999999997 5999999776   235689999999999999999999943 46899999999999994  47889999


Q ss_pred             cccCceecCCCCccccceeecCCceeeeecC
Q 026214          208 DFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       208 DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |||+|+........      ..++..|+|||
T Consensus       204 DFG~a~~~~~~~~~------~~~t~~y~aPE  228 (382)
T 2vx3_A          204 DFGSSCQLGQRIYQ------YIQSRFYRSPE  228 (382)
T ss_dssp             CCTTCEETTCCCCS------SCSCGGGCCHH
T ss_pred             eccCceeccccccc------ccCCccccChH
Confidence            99999987544222      23345578887

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.95  E-value=1.7e-27  Score=198.53  Aligned_cols=146  Identities=16%  Similarity=0.291  Sum_probs=127.6

Q ss_pred             cCCCcC-CeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHH-HhcCCCceeeEeeEEec----CCcce
Q 026214           62 NNYDQK-NVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYA-AQMSHDHILKLIGCCLE----TPIPI  133 (241)
Q Consensus        62 ~~~~~~-~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~----~~~~~  133 (241)
                      ++|... +.||+|+||.||+|.+  ++..||+|.+..     ...+.+|+.++ +.++||||+++++++..    ....+
T Consensus        17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   91 (299)
T 3m2w_A           17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL   91 (299)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence            446555 7899999999999999  789999999864     24577888888 55599999999999876    66789


Q ss_pred             EEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcC---CCcEEEcccc
Q 026214          134 LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNE---ENVAKMFDFS  210 (241)
Q Consensus       134 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~---~~~~ki~DfG  210 (241)
                      +||||+++++|.+++...   ....+++..+..++.|++.||.|||   +.+++||||||+|||++.   ++.+||+|||
T Consensus        92 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg  165 (299)
T 3m2w_A           92 IVMECLDGGELFSRIQDR---GDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFG  165 (299)
T ss_dssp             EEECCCCSCBHHHHHHHC---TTCCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCT
T ss_pred             EEEeecCCCcHHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEecCCCCCcEEEeccc
Confidence            999999999999999875   3356999999999999999999999   999999999999999988   7889999999


Q ss_pred             CceecCCC
Q 026214          211 LSISIPEG  218 (241)
Q Consensus       211 ~a~~~~~~  218 (241)
                      ++......
T Consensus       166 ~a~~~~~~  173 (299)
T 3m2w_A          166 FAKETTGE  173 (299)
T ss_dssp             TCEECTTC
T ss_pred             cccccccc
Confidence            99877653

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.95  E-value=1.8e-27  Score=202.07  Aligned_cols=164  Identities=16%  Similarity=0.142  Sum_probs=137.0

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CC-eEEEEEEeeccCCcchhhHHHHHHHHHhcCCCc------eeeEeeEEecCCc
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QE-RLISVMRFRESNRDGHGSCINNIVYAAQMSHDH------ILKLIGCCLETPI  131 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~~~  131 (241)
                      .++|...+.||+|+||.||+|.+  ++ ..||+|.+.... .....+.+|+.++..+.|++      ++.+.+++...+.
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~   96 (355)
T 2eu9_A           18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH   96 (355)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred             cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence            46788999999999999999998  44 789999987542 34567888999999997766      8999999999999


Q ss_pred             ceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeE-------------
Q 026214          132 PILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILF-------------  198 (241)
Q Consensus       132 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill-------------  198 (241)
                      .++||||+ +++|.+.+...   ....+++..+..++.|++.||.|||   +.+|+||||||+|||+             
T Consensus        97 ~~lv~e~~-~~~l~~~l~~~---~~~~~~~~~~~~i~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~  169 (355)
T 2eu9_A           97 MCIAFELL-GKNTFEFLKEN---NFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHK  169 (355)
T ss_dssp             EEEEEECC-CCBHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEESCCCEEEEECCC-
T ss_pred             EEEEEecc-CCChHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEecccccccccccc
Confidence            99999999 46888887665   2356899999999999999999999   9999999999999999             


Q ss_pred             ------cCCCcEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          199 ------NEENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       199 ------~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                            +.++.+||+|||++.........      ..++..|++||
T Consensus       170 ~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~------~~gt~~y~aPE  209 (355)
T 2eu9_A          170 SCEEKSVKNTSIRVADFGSATFDHEHHTT------IVATRHYRPPE  209 (355)
T ss_dssp             CCCEEEESCCCEEECCCTTCEETTSCCCS------SCSCGGGCCHH
T ss_pred             cccccccCCCcEEEeecCccccccccccC------CcCCCcccCCe
Confidence                  56789999999999876544322      23455678887

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.95  E-value=4.9e-28  Score=207.26  Aligned_cols=164  Identities=18%  Similarity=0.141  Sum_probs=136.8

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcC-----------CCceeeEeeEEe
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMS-----------HDHILKLIGCCL  127 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~~~~~  127 (241)
                      .+.|...+.||+|+||.||+|.+  ++..||+|.+.... .....+.+|+.++.++.           ||||+++++++.
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~   96 (373)
T 1q8y_A           18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN   96 (373)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred             CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence            35788899999999999999998  88999999987542 23466889999999886           899999999997


Q ss_pred             cCC----cceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCC-CeEEccCCCCCeeEc---
Q 026214          128 ETP----IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPR-PIVYRDFKTAHILFN---  199 (241)
Q Consensus       128 ~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~-~ivH~dlk~~Nill~---  199 (241)
                      ..+    ..+++||++ +++|.+++...   ....+++..+..++.|++.||.|||   +. +|+||||||+|||++   
T Consensus        97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~---~~~~~~~~~~~~i~~qi~~aL~~lH---~~~~ivH~Dikp~NIll~~~~  169 (373)
T 1q8y_A           97 HKGPNGVHVVMVFEVL-GENLLALIKKY---EHRGIPLIYVKQISKQLLLGLDYMH---RRCGIIHTDIKPENVLMEIVD  169 (373)
T ss_dssp             EEETTEEEEEEEECCC-CEEHHHHHHHT---TTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECSCCSGGGEEEEEEE
T ss_pred             ccCCCCceEEEEEecC-CCCHHHHHHHh---hccCCcHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChHHeEEeccC
Confidence            654    789999999 78999999775   2345899999999999999999999   87 999999999999994   


Q ss_pred             ---CCCcEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          200 ---EENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       200 ---~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                         ..+.+||+|||++..+......      ..++..|+|||
T Consensus       170 ~~~~~~~~kl~Dfg~a~~~~~~~~~------~~~t~~y~aPE  205 (373)
T 1q8y_A          170 SPENLIQIKIADLGNACWYDEHYTN------SIQTREYRSPE  205 (373)
T ss_dssp             TTTTEEEEEECCCTTCEETTBCCCS------CCSCGGGCCHH
T ss_pred             CCcCcceEEEcccccccccCCCCCC------CCCCccccCcH
Confidence               4458999999999887654222      23455678887

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.95  E-value=6.2e-28  Score=211.58  Aligned_cols=169  Identities=18%  Similarity=0.122  Sum_probs=126.3

Q ss_pred             CCCcCCeeecccceEEEEEEE-CCeEEEEEEeeccCCcchhhHHHHHHHHHhc-CCCceeeEeeEEecCCcceEEEeeCC
Q 026214           63 NYDQKNVITEDWGCILYKGFW-QERLISVMRFRESNRDGHGSCINNIVYAAQM-SHDHILKLIGCCLETPIPILAFESVE  140 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~  140 (241)
                      .|...+.||+|+||+||.+.. ++..||||++...   ....+.+|+.++..+ +||||+++++++.+.+..++||||+.
T Consensus        16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~   92 (434)
T 2rio_A           16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN   92 (434)
T ss_dssp             CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS
T ss_pred             eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC
Confidence            345568899999999976554 8999999998754   235678999999887 89999999999999999999999996


Q ss_pred             CCCHHHHHhhcCCCCC--CCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCC-------------CcEE
Q 026214          141 YGNLRDRILSASQPQT--EPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEE-------------NVAK  205 (241)
Q Consensus       141 ~gsL~~~l~~~~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~-------------~~~k  205 (241)
                       |+|.+++........  ...++..+..++.|++.||.|||   +.+|+||||||+|||++.+             +.+|
T Consensus        93 -gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~k  168 (434)
T 2rio_A           93 -LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRIL  168 (434)
T ss_dssp             -EEHHHHHHTC------------CCHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEE
T ss_pred             -CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCcccccccccCCCceEEE
Confidence             699999976522110  11133345789999999999999   9999999999999999754             4899


Q ss_pred             EccccCceecCCCCcccc-ceeecCCceeeeecC
Q 026214          206 MFDFSLSISIPEGGTSGA-KCLKSERTEICCVRE  238 (241)
Q Consensus       206 i~DfG~a~~~~~~~~~~~-~~~~~~~~~~~~~~e  238 (241)
                      |+|||+|+.+..+..... ......++..|+|||
T Consensus       169 L~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE  202 (434)
T 2rio_A          169 ISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPE  202 (434)
T ss_dssp             ECCCTTCEECCC--------------CCTTSCHH
T ss_pred             EcccccceecCCCCccceeeecCCCCCCCccCHH
Confidence            999999998876543322 222334566788888

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.95  E-value=4.3e-28  Score=221.05  Aligned_cols=169  Identities=18%  Similarity=0.200  Sum_probs=139.9

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEec------CCcc
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLE------TPIP  132 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~~~  132 (241)
                      ++|...+.||+|+||.||+|.+  ++..||+|.+.... ......+.+|+.++..++||||+++++++..      .+..
T Consensus        14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~   93 (676)
T 3qa8_A           14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP   93 (676)
T ss_dssp             ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred             CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence            6799999999999999999998  78999999987642 2335678999999999999999999998765      6678


Q ss_pred             eEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCc---EEEccc
Q 026214          133 ILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENV---AKMFDF  209 (241)
Q Consensus       133 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~---~ki~Df  209 (241)
                      ++||||+++++|.+++....  ....+++..+..++.|++.||.|||   +.+|+|+||||+||+++.++.   +||+||
T Consensus        94 ~LVmEy~~ggsL~~~L~~~~--~~~~lse~~i~~I~~QLl~aL~yLH---s~gIVHrDLKP~NILl~~~g~~~~vKL~DF  168 (676)
T 3qa8_A           94 LLAMEYCEGGDLRKYLNQFE--NCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDL  168 (676)
T ss_dssp             CCEEECCSSCBHHHHHHSSS--CTTCCCSSHHHHHHHHHHHHHHHHH---HTTBCCCCCCSTTEEEECCSSSCEEEECSC
T ss_pred             EEEEEeCCCCCHHHHHHhcc--cCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEeecCCCceeEEEccc
Confidence            99999999999999997652  2345888999999999999999999   999999999999999987654   999999


Q ss_pred             cCceecCCCCccccceeecCCceeeeecCC
Q 026214          210 SLSISIPEGGTSGAKCLKSERTEICCVREN  239 (241)
Q Consensus       210 G~a~~~~~~~~~~~~~~~~~~~~~~~~~e~  239 (241)
                      |++..+..+....    ...++..|++||-
T Consensus       169 G~a~~~~~~~~~~----~~~gt~~Y~APE~  194 (676)
T 3qa8_A          169 GYAKELDQGELCT----EFVGTLQYLAPEL  194 (676)
T ss_dssp             CCCCBTTSCCCCC----CCCSCCTTCSSCS
T ss_pred             ccccccccccccc----cccCCcccCChHH
Confidence            9999876554322    2334566788873

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.94  E-value=1.6e-27  Score=199.71  Aligned_cols=169  Identities=18%  Similarity=0.217  Sum_probs=122.6

Q ss_pred             HHHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCc-chhh-HHHHHHHHHhcCCCceeeEeeEEecCCcce
Q 026214           58 KLATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRD-GHGS-CINNIVYAAQMSHDHILKLIGCCLETPIPI  133 (241)
Q Consensus        58 ~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~-~~~~-~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  133 (241)
                      ....++|...+.||+|+||.||+|.+  ++..||+|.+...... .... +..+..++..++||||+++++++...+..+
T Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~  100 (318)
T 2dyl_A           21 QAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVF  100 (318)
T ss_dssp             ECCGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred             hhhhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEE
Confidence            33456688889999999999999999  7899999999765422 2223 344455678889999999999999999999


Q ss_pred             EEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCC-CeEEccCCCCCeeEcCCCcEEEccccCc
Q 026214          134 LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPR-PIVYRDFKTAHILFNEENVAKMFDFSLS  212 (241)
Q Consensus       134 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~-~ivH~dlk~~Nill~~~~~~ki~DfG~a  212 (241)
                      +||||+ ++.+..+....    ...+++..+..++.|++.||.|||   +. +++|+||||+||+++.++.+||+|||++
T Consensus       101 lv~e~~-~~~~~~l~~~~----~~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~  172 (318)
T 2dyl_A          101 IAMELM-GTCAEKLKKRM----QGPIPERILGKMTVAIVKALYYLK---EKHGVIHRDVKPSNILLDERGQIKLCDFGIS  172 (318)
T ss_dssp             EEECCC-SEEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHH---HHHCCCCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred             EEEecc-CCcHHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHH---hhCCEEeCCCCHHHEEECCCCCEEEEECCCc
Confidence            999999 45666665443    356899999999999999999999   85 9999999999999999999999999999


Q ss_pred             eecCCCCccccceeecCCceeeeecC
Q 026214          213 ISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ..+..+....    ...++..|++||
T Consensus       173 ~~~~~~~~~~----~~~~~~~y~aPE  194 (318)
T 2dyl_A          173 GRLVDDKAKD----RSAGCAAYMAPE  194 (318)
T ss_dssp             ------------------CCTTCCHH
T ss_pred             hhccCCcccc----ccCCCccccChh
Confidence            8775543221    122444567776

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.94  E-value=2.7e-27  Score=212.69  Aligned_cols=156  Identities=13%  Similarity=0.072  Sum_probs=119.5

Q ss_pred             CcCCeeecccceEEEEEEECCeEEEEEEeeccCCc--------chhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           65 DQKNVITEDWGCILYKGFWQERLISVMRFRESNRD--------GHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        65 ~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      ...+.||+|+||.||+|...+..+++|........        ..+.+.+|+.++++++||||+++..++...+..++||
T Consensus       339 ~~~~~LG~G~fg~Vy~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVm  418 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMM  418 (540)
T ss_dssp             ---------CCEEEEEEECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEE
T ss_pred             CCCCEEeeCCCEEEEEEEECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEE
Confidence            34678999999999999888899999986543211        1245799999999999999997777777788889999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||+++++|.+++..             +..++.|++.||.|||   +.+|+||||||+|||++.  .+||+|||+|+.+.
T Consensus       419 E~~~ggsL~~~l~~-------------~~~i~~qi~~aL~~LH---~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~  480 (540)
T 3en9_A          419 SYINGKLAKDVIED-------------NLDIAYKIGEIVGKLH---KNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISN  480 (540)
T ss_dssp             ECCCSEEHHHHSTT-------------CTHHHHHHHHHHHHHH---HTTEECTTCCTTSEEESS--SEEECCCTTCEECC
T ss_pred             ECCCCCCHHHHHHH-------------HHHHHHHHHHHHHHHH---HCcCccCCCCHHHEEECC--eEEEEECccCEECC
Confidence            99999999999932             4589999999999999   999999999999999998  99999999999987


Q ss_pred             CCCccccc----eeecCCceeeeecC
Q 026214          217 EGGTSGAK----CLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~----~~~~~~~~~~~~~e  238 (241)
                      .+......    ...-.++..|++||
T Consensus       481 ~~~~~~~~~~~~~~~~~GT~~y~APE  506 (540)
T 3en9_A          481 LDEDKAVDLIVFKKAVLSTHHEKFDE  506 (540)
T ss_dssp             CHHHHHHHHHHHHHHHHHHCGGGHHH
T ss_pred             CccccccchhhhhhhhcCCCCcCCHH
Confidence            65432211    11223456777887

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.92  E-value=2.1e-25  Score=184.90  Aligned_cols=143  Identities=14%  Similarity=0.087  Sum_probs=114.4

Q ss_pred             HHHHHhcCCCcCCeeecccceEEEEEEE-CCeEEEEEEeeccCCc------------------chhhHHHHHHHHHhcCC
Q 026214           56 ELKLATNNYDQKNVITEDWGCILYKGFW-QERLISVMRFRESNRD------------------GHGSCINNIVYAAQMSH  116 (241)
Q Consensus        56 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~------------------~~~~~~~E~~~l~~l~h  116 (241)
                      .+......|...+.||+|+||.||+|.+ ++..||+|.++.....                  ....+.+|+.++..++ 
T Consensus        84 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~-  162 (282)
T 1zar_A           84 RLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ-  162 (282)
T ss_dssp             HHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-
T ss_pred             HHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-
Confidence            3344455566779999999999999999 7999999998643211                  2346889999999998 


Q ss_pred             CceeeEeeEEecCCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCe
Q 026214          117 DHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHI  196 (241)
Q Consensus       117 ~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Ni  196 (241)
                       | +++.+++. .+..++||||+++++|.+ +..           .....++.|++.||.|||   +.+|+||||||+||
T Consensus       163 -~-~~v~~~~~-~~~~~lvmE~~~g~~L~~-l~~-----------~~~~~i~~qi~~~l~~lH---~~giiHrDlkp~NI  224 (282)
T 1zar_A          163 -G-LAVPKVYA-WEGNAVLMELIDAKELYR-VRV-----------ENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNV  224 (282)
T ss_dssp             -T-SSSCCEEE-EETTEEEEECCCCEEGGG-CCC-----------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSE
T ss_pred             -C-CCcCeEEe-ccceEEEEEecCCCcHHH-cch-----------hhHHHHHHHHHHHHHHHH---HCCCEeCCCCHHHE
Confidence             4 55555443 356799999999999998 511           123469999999999999   99999999999999


Q ss_pred             eEcCCCcEEEccccCceecCCC
Q 026214          197 LFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       197 ll~~~~~~ki~DfG~a~~~~~~  218 (241)
                      |++ ++.+||+|||+|+....+
T Consensus       225 Ll~-~~~vkl~DFG~a~~~~~~  245 (282)
T 1zar_A          225 LVS-EEGIWIIDFPQSVEVGEE  245 (282)
T ss_dssp             EEE-TTEEEECCCTTCEETTST
T ss_pred             EEE-CCcEEEEECCCCeECCCC
Confidence            999 999999999999977655

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.92  E-value=5.7e-26  Score=197.90  Aligned_cols=166  Identities=12%  Similarity=0.092  Sum_probs=121.5

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC---cchhhHHHHHHHHHhcCC-Cce---------e------
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR---DGHGSCINNIVYAAQMSH-DHI---------L------  120 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h-~ni---------v------  120 (241)
                      ..|...+.||+|+||.||+|.+  ++..||||++.....   ...+.+.+|+.++..+.| +|.         +      
T Consensus        78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  157 (413)
T 3dzo_A           78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV  157 (413)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred             eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence            4466778999999999999998  799999999874332   235778999999999976 221         1      


Q ss_pred             e------EeeEEec-----CCcceEEEeeCCCCCHHHHHhhcC--CCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeE
Q 026214          121 K------LIGCCLE-----TPIPILAFESVEYGNLRDRILSAS--QPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIV  187 (241)
Q Consensus       121 ~------l~~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~~--~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iv  187 (241)
                      .      +..++..     ....+++|+++ +++|.+++....  ......+++..++.++.|++.||.|||   +.+|+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ii  233 (413)
T 3dzo_A          158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGLV  233 (413)
T ss_dssp             ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTEE
T ss_pred             ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcc
Confidence            1      1111111     12356777766 479999985210  012455788899999999999999999   99999


Q ss_pred             EccCCCCCeeEcCCCcEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          188 YRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       188 H~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ||||||+|||++.++.+||+|||+++.....    .....+   ..|+|||
T Consensus       234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g---~~y~aPE  277 (413)
T 3dzo_A          234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG---RGFAPPE  277 (413)
T ss_dssp             CSCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC---TTTCCHH
T ss_pred             cCCcccceEEEecCCeEEEEeccceeecCCc----cccCCC---CceeCch
Confidence            9999999999999999999999999876544    111222   5678887

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.88  E-value=1.6e-22  Score=165.49  Aligned_cols=140  Identities=11%  Similarity=0.029  Sum_probs=108.4

Q ss_pred             CCcCCeeecccceEEEEEEE--CCeE--EEEEEeeccCCcc------------------------hhhHHHHHHHHHhcC
Q 026214           64 YDQKNVITEDWGCILYKGFW--QERL--ISVMRFRESNRDG------------------------HGSCINNIVYAAQMS  115 (241)
Q Consensus        64 ~~~~~~lg~G~~g~Vy~~~~--~~~~--vavK~~~~~~~~~------------------------~~~~~~E~~~l~~l~  115 (241)
                      |.....||+|+||.||+|.+  ++..  ||||.++......                        ...+.+|+.++..+.
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  128 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK  128 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence            56678999999999999998  8989  9999875432110                        125788999999998


Q ss_pred             CCce--eeEeeEEecCCcceEEEeeCCC-C----CHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEE
Q 026214          116 HDHI--LKLIGCCLETPIPILAFESVEY-G----NLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVY  188 (241)
Q Consensus       116 h~ni--v~l~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH  188 (241)
                      |+++  +.++++    +..++||||+.+ |    +|.+....        .++..+..++.|++.||.|||.  ..+|+|
T Consensus       129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~--------~~~~~~~~i~~qi~~~l~~lH~--~~givH  194 (258)
T 1zth_A          129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE--------LKELDVEGIFNDVVENVKRLYQ--EAELVH  194 (258)
T ss_dssp             HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG--------GGGSCHHHHHHHHHHHHHHHHH--TSCEEC
T ss_pred             hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc--------cChHHHHHHHHHHHHHHHHHHH--HCCEEe
Confidence            8764  334332    367899999942 3    77776522        2244567899999999999994  458999


Q ss_pred             ccCCCCCeeEcCCCcEEEccccCceecCCCC
Q 026214          189 RDFKTAHILFNEENVAKMFDFSLSISIPEGG  219 (241)
Q Consensus       189 ~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~  219 (241)
                      |||||+|||++.  .++|+|||+|.....+.
T Consensus       195 rDlkp~NILl~~--~~~liDFG~a~~~~~~~  223 (258)
T 1zth_A          195 ADLSEYNIMYID--KVYFIDMGQAVTLRHPM  223 (258)
T ss_dssp             SSCSTTSEEESS--SEEECCCTTCEETTSTT
T ss_pred             CCCCHHHEEEcC--cEEEEECcccccCCCcc
Confidence            999999999988  99999999999876554

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.79  E-value=5.3e-20  Score=157.72  Aligned_cols=146  Identities=12%  Similarity=0.101  Sum_probs=103.2

Q ss_pred             HHHhcCCCcCCeeecccceEEEEEEE-CCeEEEEEEeeccCCc--------------chhh--------HHHHHHHHHhc
Q 026214           58 KLATNNYDQKNVITEDWGCILYKGFW-QERLISVMRFRESNRD--------------GHGS--------CINNIVYAAQM  114 (241)
Q Consensus        58 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~--------------~~~~--------~~~E~~~l~~l  114 (241)
                      .....-|....+||.|++|.||+|.+ +|+.||||+++.....              ....        ...|...|.++
T Consensus        91 ~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL  170 (397)
T 4gyi_A           91 AARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKAL  170 (397)
T ss_dssp             HHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH
Confidence            33334478899999999999999998 8999999987642110              0011        23456666666


Q ss_pred             CCCceeeEeeEEecCCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCC
Q 026214          115 SHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTA  194 (241)
Q Consensus       115 ~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~  194 (241)
                      .+.++.-..-+..  ...+|||||++|++|.++..         .  .....++.|++.+|.+||   ..+||||||||.
T Consensus       171 ~~~gv~vp~p~~~--~~~~LVME~i~G~~L~~l~~---------~--~~~~~l~~qll~~l~~lH---~~gIVHrDLKp~  234 (397)
T 4gyi_A          171 YEEGFPVPEPIAQ--SRHTIVMSLVDALPMRQVSS---------V--PDPASLYADLIALILRLA---KHGLIHGDFNEF  234 (397)
T ss_dssp             HHTTCSCCCEEEE--ETTEEEEECCSCEEGGGCCC---------C--SCHHHHHHHHHHHHHHHH---HTTEECSCCSTT
T ss_pred             HhcCCCCCeeeec--cCceEEEEecCCccHhhhcc---------c--HHHHHHHHHHHHHHHHHH---HCCCcCCCCCHH
Confidence            5444322111111  23479999999888865431         1  123467899999999999   899999999999


Q ss_pred             CeeEcCCC----------cEEEccccCceecCCCC
Q 026214          195 HILFNEEN----------VAKMFDFSLSISIPEGG  219 (241)
Q Consensus       195 Nill~~~~----------~~ki~DfG~a~~~~~~~  219 (241)
                      |||+++++          .+.|+||+-+.....+.
T Consensus       235 NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~~hp~  269 (397)
T 4gyi_A          235 NILIREEKDAEDPSSITLTPIIIXFPQMVSMDHPN  269 (397)
T ss_dssp             SEEEEEEECSSCTTSEEEEEEECCCTTCEETTSTT
T ss_pred             HEEEeCCCCcccccccccceEEEEeCCcccCCCCC
Confidence            99998776          38999999887765543

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.60  E-value=6.4e-15  Score=120.03  Aligned_cols=148  Identities=10%  Similarity=-0.035  Sum_probs=114.6

Q ss_pred             HHHhcCCCcCCeeecccceEEEEEEECCeEEEEEEeeccCCcchhhHHHHHHHHHhc-CCCceeeEeeEEecCCcceEEE
Q 026214           58 KLATNNYDQKNVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQM-SHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        58 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      ......|.....++.|+.+.||++...+..+++|............+.+|+.++..+ .+..++++++++...+..|++|
T Consensus        10 ~~~l~~~~~~~~~~g~s~~~v~~~~~~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~   89 (263)
T 3tm0_A           10 KKLIEKYRCVKDTEGMSPAKVYKLVGENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLM   89 (263)
T ss_dssp             HHHHTTSEEEECCSCCSSSEEEEEECSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEE
T ss_pred             HHHhccceeEeeccCCCCCeEEEEECCCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEE
Confidence            344456777777888888999999887889999998753223345689999999998 4677889999998888999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCC-----------------------------------
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFG-----------------------------------  181 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-----------------------------------  181 (241)
                      ||++|.+|.+.+..          ......++.+++.+|..||..                                   
T Consensus        90 e~i~G~~l~~~~~~----------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (263)
T 3tm0_A           90 SEADGVLCSEEYED----------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWE  159 (263)
T ss_dssp             ECCSSEEHHHHCCT----------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGS
T ss_pred             EecCCeehhhccCC----------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccc
Confidence            99999998876411          112236788899999999940                                   


Q ss_pred             ---------------------CCCCeEEccCCCCCeeEcCCCcEEEccccCceec
Q 026214          182 ---------------------FPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI  215 (241)
Q Consensus       182 ---------------------~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~  215 (241)
                                           ....++|+|++|.|||++++..+.|+||+.+..-
T Consensus       160 ~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~g  214 (263)
T 3tm0_A          160 EDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGRA  214 (263)
T ss_dssp             TTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEEE
T ss_pred             ccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcccC
Confidence                                 0145899999999999987666779999988543

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=99.41  E-value=1.3e-12  Score=105.73  Aligned_cols=130  Identities=11%  Similarity=-0.034  Sum_probs=96.3

Q ss_pred             ecccceEEEEEEE-CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCc--eeeEeeEEecCCcceEEEeeCCCCCHHHH
Q 026214           71 TEDWGCILYKGFW-QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDH--ILKLIGCCLETPIPILAFESVEYGNLRDR  147 (241)
Q Consensus        71 g~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~e~~~~gsL~~~  147 (241)
                      +.|..+.||++.. ++..+++|.....   ....+.+|+.+++.+.+.+  +++++++...++..+++|||++|.+|.  
T Consensus        29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~--  103 (264)
T 1nd4_A           29 IGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL--  103 (264)
T ss_dssp             CTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--
T ss_pred             cCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--
Confidence            4566689999977 5678999987543   2356789999999995444  556888888777899999999988873  


Q ss_pred             HhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCC---------------------------------------------
Q 026214          148 ILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGF---------------------------------------------  182 (241)
Q Consensus       148 l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~---------------------------------------------  182 (241)
                      . ..       .+.   ..++.+++..|..||...                                             
T Consensus       104 ~-~~-------~~~---~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (264)
T 1nd4_A          104 S-SH-------LAP---AEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFA  172 (264)
T ss_dssp             T-SC-------CCH---HHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHH
T ss_pred             c-Cc-------CCH---hHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHH
Confidence            2 11       111   256777778888888321                                             


Q ss_pred             ----------CCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          183 ----------PRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       183 ----------~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                                ...++|+|++|.|||++.+..+.|+|||.+...+
T Consensus       173 ~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~g~  216 (264)
T 1nd4_A          173 RLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVAD  216 (264)
T ss_dssp             HHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEEEE
T ss_pred             HHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcccCC
Confidence                      1129999999999999877667799999987543

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=99.37  E-value=2.4e-12  Score=109.53  Aligned_cols=143  Identities=13%  Similarity=0.087  Sum_probs=106.7

Q ss_pred             cCCeeecccceEEEEEEECCeEEEEEEee--ccC-CcchhhHHHHHHHHHhcC--CCceeeEeeEEecC---CcceEEEe
Q 026214           66 QKNVITEDWGCILYKGFWQERLISVMRFR--ESN-RDGHGSCINNIVYAAQMS--HDHILKLIGCCLET---PIPILAFE  137 (241)
Q Consensus        66 ~~~~lg~G~~g~Vy~~~~~~~~vavK~~~--~~~-~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~---~~~~lv~e  137 (241)
                      ..+.|+.|.++.||+....+..+++|+..  ... ......+.+|..++..+.  +..+++++.++.+.   +..++|||
T Consensus        42 ~~~~l~~G~sn~~y~v~~~~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme  121 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVTPGQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME  121 (359)
T ss_dssp             EEEECCC-CCSCEEEEECSSCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred             eEEEcCCcccceEEEEEECCceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence            34678899999999998877788888776  332 123457889999999996  45578888888766   45899999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCC-----------------------------------
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGF-----------------------------------  182 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~-----------------------------------  182 (241)
                      |++|.++.+..       ...++......++.+++..|..||...                                   
T Consensus       122 ~v~G~~l~~~~-------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (359)
T 3dxp_A          122 FVSGRVLWDQS-------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESI  194 (359)
T ss_dssp             CCCCBCCCCTT-------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCC
T ss_pred             ecCCeecCCCc-------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCC
Confidence            99987774422       233678888889999999999999410                                   


Q ss_pred             --------------------CCCeEEccCCCCCeeEcCCCc--EEEccccCceec
Q 026214          183 --------------------PRPIVYRDFKTAHILFNEENV--AKMFDFSLSISI  215 (241)
Q Consensus       183 --------------------~~~ivH~dlk~~Nill~~~~~--~ki~DfG~a~~~  215 (241)
                                          ...++|+|++|.|||++.++.  +.|+||+.+..-
T Consensus       195 ~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g  249 (359)
T 3dxp_A          195 PAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG  249 (359)
T ss_dssp             HHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred             hHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence                                246899999999999987653  689999988653

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=98.88  E-value=6.7e-09  Score=86.18  Aligned_cols=139  Identities=19%  Similarity=0.247  Sum_probs=96.5

Q ss_pred             CCeeecccceEEEEEEECCeEEEEEEeeccCCcchhhHHHHHHHHHhc-CCCc--eeeEeeEEecCC---cceEEEeeCC
Q 026214           67 KNVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQM-SHDH--ILKLIGCCLETP---IPILAFESVE  140 (241)
Q Consensus        67 ~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~n--iv~l~~~~~~~~---~~~lv~e~~~  140 (241)
                      .+.++.|....||+..   ..+++|.....  .....+.+|..++..+ .+..  ++.++......+   ..|+||++++
T Consensus        25 i~~~~~G~~n~v~~v~---~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~   99 (304)
T 3sg8_A           25 IEISGEGNDCIAYEIN---RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIK   99 (304)
T ss_dssp             CCEEEECSSEEEEEST---TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCC
T ss_pred             eEecCCCCcceEEEEC---CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccC
Confidence            4568999999888763   56888875432  2356788999999888 3333  345554443333   4589999999


Q ss_pred             CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCC---------------------------------------
Q 026214          141 YGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFG---------------------------------------  181 (241)
Q Consensus       141 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---------------------------------------  181 (241)
                      |.+|.+....       .++......++.+++..+..||..                                       
T Consensus       100 G~~l~~~~~~-------~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (304)
T 3sg8_A          100 GVPLTPLLLN-------NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKK  172 (304)
T ss_dssp             CEECCHHHHH-------TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHH
T ss_pred             CeECCccccc-------cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHH
Confidence            8887654422       256666666777777777777631                                       


Q ss_pred             ----------------CCCCeEEccCCCCCeeEcC--CCcEEEccccCceecCC
Q 026214          182 ----------------FPRPIVYRDFKTAHILFNE--ENVAKMFDFSLSISIPE  217 (241)
Q Consensus       182 ----------------~~~~ivH~dlk~~Nill~~--~~~~ki~DfG~a~~~~~  217 (241)
                                      ....++|+|++|.||+++.  ...+.|+||+.+..-.+
T Consensus       173 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~  226 (304)
T 3sg8_A          173 VDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDP  226 (304)
T ss_dssp             HHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECT
T ss_pred             HHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCCh
Confidence                            1135799999999999988  56688999999876433

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=98.82  E-value=3.4e-08  Score=80.25  Aligned_cols=136  Identities=10%  Similarity=-0.011  Sum_probs=93.5

Q ss_pred             eeecccce-EEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcC-CCceeeEeeEEecCCcceEEEeeCCCCCH
Q 026214           69 VITEDWGC-ILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMS-HDHILKLIGCCLETPIPILAFESVEYGNL  144 (241)
Q Consensus        69 ~lg~G~~g-~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~gsL  144 (241)
                      .+..|..+ .||+...  .+..+++|+-...   ....+.+|...|+.+. +--+.++++++.+.+..++|||+++|.++
T Consensus        31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~  107 (272)
T 4gkh_A           31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA  107 (272)
T ss_dssp             EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred             EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence            44555554 6898776  4567889986543   3456788999988883 33477888899888999999999998887


Q ss_pred             HHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCC-------------------------------------------
Q 026214          145 RDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFG-------------------------------------------  181 (241)
Q Consensus       145 ~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-------------------------------------------  181 (241)
                      .+.....         ......+..+++..|.-||..                                           
T Consensus       108 ~~~~~~~---------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (272)
T 4gkh_A          108 FQVLEEY---------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQ  178 (272)
T ss_dssp             HHHHHHC---------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHH
T ss_pred             cccccCC---------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHH
Confidence            7655321         011123444444444444410                                           


Q ss_pred             ------------CCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          182 ------------FPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       182 ------------~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                                  ....++|+|+.+.|||++.++.+-|+||+.+..-+
T Consensus       179 ~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~gd  225 (272)
T 4gkh_A          179 VWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGIAD  225 (272)
T ss_dssp             HHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEEEE
T ss_pred             HHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccccCC
Confidence                        01237999999999999987777899999887543

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=98.81  E-value=4.2e-08  Score=81.59  Aligned_cols=138  Identities=12%  Similarity=0.089  Sum_probs=90.6

Q ss_pred             CCeeecccceEEEEEEECCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCC---ceeeEeeEEe-cCCcceEEEeeCCCC
Q 026214           67 KNVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQMSHD---HILKLIGCCL-ETPIPILAFESVEYG  142 (241)
Q Consensus        67 ~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~-~~~~~~lv~e~~~~g  142 (241)
                      .+.++.|....||+.   +..+++|.-..  ......+.+|..++..+.+.   .+.+++.++. ..+..+++||+++|.
T Consensus        24 v~~l~~G~~n~v~~v---g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~   98 (306)
T 3tdw_A           24 VESLGEGFRNYAILV---NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQ   98 (306)
T ss_dssp             EEEEEECSSEEEEEE---TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSE
T ss_pred             eeecCCCcceeEEEE---CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCe
Confidence            346788888889988   56788887422  12346788999999999642   3566676664 455688999999988


Q ss_pred             CHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCC-----------------------------------------
Q 026214          143 NLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFG-----------------------------------------  181 (241)
Q Consensus       143 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-----------------------------------------  181 (241)
                      +|.+....       .++......++.++...|..||..                                         
T Consensus        99 ~l~~~~~~-------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~  171 (306)
T 3tdw_A           99 ILGEDGMA-------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDY  171 (306)
T ss_dssp             ECHHHHHT-------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHH
T ss_pred             ECchhhhh-------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHH
Confidence            77663211       123333333333333333333310                                         


Q ss_pred             ----------------CCCCeEEccCCCCCeeEcC---CCc-EEEccccCceecC
Q 026214          182 ----------------FPRPIVYRDFKTAHILFNE---ENV-AKMFDFSLSISIP  216 (241)
Q Consensus       182 ----------------~~~~ivH~dlk~~Nill~~---~~~-~ki~DfG~a~~~~  216 (241)
                                      ....++|+|++|.|||++.   ++. +.|+||+.+..-+
T Consensus       172 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~gd  226 (306)
T 3tdw_A          172 LTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAISD  226 (306)
T ss_dssp             HHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEEC
T ss_pred             HHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCCC
Confidence                            1446799999999999987   344 5899999887543

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=98.66  E-value=1.2e-07  Score=80.10  Aligned_cols=78  Identities=4%  Similarity=-0.187  Sum_probs=54.8

Q ss_pred             Cee-ecccceEEEEEEEC--------CeEEEEEEeeccC---CcchhhHHHHHHHHHhcC-C--CceeeEeeEEecC---
Q 026214           68 NVI-TEDWGCILYKGFWQ--------ERLISVMRFRESN---RDGHGSCINNIVYAAQMS-H--DHILKLIGCCLET---  129 (241)
Q Consensus        68 ~~l-g~G~~g~Vy~~~~~--------~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h--~niv~l~~~~~~~---  129 (241)
                      +.| +.|....+|+....        +..+++|......   ......+.+|..++..+. +  ..+.+++.++.+.   
T Consensus        26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~  105 (357)
T 3ats_A           26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL  105 (357)
T ss_dssp             EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred             EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence            466 78888899988764        6778888765432   112356788999988884 3  3567788777655   


Q ss_pred             CcceEEEeeCCCCCHH
Q 026214          130 PIPILAFESVEYGNLR  145 (241)
Q Consensus       130 ~~~~lv~e~~~~gsL~  145 (241)
                      +..+++||+++|.++.
T Consensus       106 g~~~~v~e~l~G~~l~  121 (357)
T 3ats_A          106 GTPFFLMDYVEGVVPP  121 (357)
T ss_dssp             SSCEEEEECCCCBCCC
T ss_pred             CCceEEEEecCCCChh
Confidence            3578999999876554

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=98.42  E-value=4e-06  Score=70.01  Aligned_cols=143  Identities=10%  Similarity=0.072  Sum_probs=79.7

Q ss_pred             CeeecccceEEEEEEECCeEEEEEEeeccCCcchhhHHHHHHHHHhcCC--CceeeEee------EEecCCcceEEEeeC
Q 026214           68 NVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQMSH--DHILKLIG------CCLETPIPILAFESV  139 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~------~~~~~~~~~lv~e~~  139 (241)
                      ..|+.|..+.||++...+..+++|+....    ...+..|..++..|..  -.+++++.      +....+..+++++|+
T Consensus        38 ~~l~gG~~n~~~~v~~~~~~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i  113 (346)
T 2q83_A           38 DVIQGNQMALVWKVHTDSGAVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWI  113 (346)
T ss_dssp             EECC----CEEEEEEETTEEEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECC
T ss_pred             eeccccccCcEEEEEeCCCCEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEee
Confidence            34555678899999886667999988652    2334445555555531  12333332      112456788999999


Q ss_pred             CCCCHH--------------HHHhhcCCCC--C-------CCCCHHHH-------------------------------H
Q 026214          140 EYGNLR--------------DRILSASQPQ--T-------EPLLMKHR-------------------------------L  165 (241)
Q Consensus       140 ~~gsL~--------------~~l~~~~~~~--~-------~~l~~~~~-------------------------------~  165 (241)
                      +|.++.              ..++......  .       ....|...                               .
T Consensus       114 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  193 (346)
T 2q83_A          114 EGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEID  193 (346)
T ss_dssp             CCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred             cCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHH
Confidence            975432              1111110000  0       01122211                               0


Q ss_pred             HHHHHHHHHHHHHhC----------CCCCCeEEccCCCCCeeEcCCCcEEEccccCcee
Q 026214          166 KIAMDIAHALAYLHF----------GFPRPIVYRDFKTAHILFNEENVAKMFDFSLSIS  214 (241)
Q Consensus       166 ~i~~~i~~~l~~lH~----------~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~  214 (241)
                      .+...+..++.+|+.          .....++|+|+++.|||++.++.+.|+||+.+..
T Consensus       194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~  252 (346)
T 2q83_A          194 GFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF  252 (346)
T ss_dssp             HHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred             HHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence            111223345555541          0157899999999999998788899999998864

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=98.41  E-value=8.9e-07  Score=76.03  Aligned_cols=74  Identities=7%  Similarity=0.015  Sum_probs=49.8

Q ss_pred             CCeeecccceEEEEEEE--CCeEEEEEEeeccCC-------cchhhHHHHHHHHHhcCC--Cc-eeeEeeEEecCCcceE
Q 026214           67 KNVITEDWGCILYKGFW--QERLISVMRFRESNR-------DGHGSCINNIVYAAQMSH--DH-ILKLIGCCLETPIPIL  134 (241)
Q Consensus        67 ~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h--~n-iv~l~~~~~~~~~~~l  134 (241)
                      .+.||.|..+.||++..  .+..+++|.......       .....+..|..++..+..  |. +++++.+  +.+..++
T Consensus        35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l  112 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT  112 (397)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred             EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence            45789999999999965  567899997653211       123557889999888742  33 4455543  3456789


Q ss_pred             EEeeCCCC
Q 026214          135 AFESVEYG  142 (241)
Q Consensus       135 v~e~~~~g  142 (241)
                      |||++++.
T Consensus       113 vmE~l~g~  120 (397)
T 2olc_A          113 VMEDLSHL  120 (397)
T ss_dssp             EECCCTTS
T ss_pred             EEEeCCCc
Confidence            99999763

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=98.14  E-value=1.8e-05  Score=65.87  Aligned_cols=140  Identities=8%  Similarity=-0.048  Sum_probs=92.2

Q ss_pred             CCeeecccceEEEEEEECCeEEEEEEeeccCCcchhhHHHHHHHHHhcC---CCceeeEeeEEecCCcceEEEeeCCCCC
Q 026214           67 KNVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQMS---HDHILKLIGCCLETPIPILAFESVEYGN  143 (241)
Q Consensus        67 ~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv~e~~~~gs  143 (241)
                      .+.|+.|....+|+...++..+++|.....   ....+..|...|+.|.   ...+++++.++...+..+++|||+++.+
T Consensus        41 ~~~l~gG~~n~~y~v~~~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~  117 (312)
T 3jr1_A           41 KEKLYSGEMNEIWLINDEVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSK  117 (312)
T ss_dssp             EEEECCSSSSEEEEEESSSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCC
T ss_pred             eEEeCCccceeeeEEEECCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCC
Confidence            467899999999999887788999987643   3456888988888883   3568888888887788999999999765


Q ss_pred             HH--------H---HHhhcCC-CC----------------CCCCCHHHHH---HHH----------------HHHHHHH-
Q 026214          144 LR--------D---RILSASQ-PQ----------------TEPLLMKHRL---KIA----------------MDIAHAL-  175 (241)
Q Consensus       144 L~--------~---~l~~~~~-~~----------------~~~l~~~~~~---~i~----------------~~i~~~l-  175 (241)
                      +.        .   .++.... ..                ...-+|....   ++.                ..++..+ 
T Consensus       118 ~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l~  197 (312)
T 3jr1_A          118 NKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVA  197 (312)
T ss_dssp             CCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHHH
T ss_pred             CCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence            42        1   2222211 00                0012344321   111                1122222 


Q ss_pred             HHHhC-CCCCCeEEccCCCCCeeEcCCCcEEEcccc
Q 026214          176 AYLHF-GFPRPIVYRDFKTAHILFNEENVAKMFDFS  210 (241)
Q Consensus       176 ~~lH~-~~~~~ivH~dlk~~Nill~~~~~~ki~DfG  210 (241)
                      ..|.. .....++|+|+.+.|++++.++ +.|.||.
T Consensus       198 ~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~  232 (312)
T 3jr1_A          198 DTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA  232 (312)
T ss_dssp             HHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred             HHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence            23321 1245789999999999999887 8899984

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=98.06  E-value=4.7e-05  Score=65.83  Aligned_cols=73  Identities=4%  Similarity=-0.018  Sum_probs=45.3

Q ss_pred             CCeeecccceEEEEEEECCeEEEEEEeecc----CCc---chhhHHHHHHHHHhc---CCCceeeEeeEEecCCcceEEE
Q 026214           67 KNVITEDWGCILYKGFWQERLISVMRFRES----NRD---GHGSCINNIVYAAQM---SHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        67 ~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~----~~~---~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      .+.||.|....||++..++..+++|...+.    ...   .......|.+++..+   ....+++++.+.  .+..++||
T Consensus        39 i~~l~~G~~n~vyrv~~~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~lv~  116 (420)
T 2pyw_A           39 IKEVGDGNLNFVFIVVGSSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALIGM  116 (420)
T ss_dssp             EEECCCSSSCEEEEEECSSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEEEE
T ss_pred             EEEccCCCcEEEEEEEcCCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEEEE
Confidence            457889999999999777788999953321    111   112223333333322   234566676654  56789999


Q ss_pred             eeC-CC
Q 026214          137 ESV-EY  141 (241)
Q Consensus       137 e~~-~~  141 (241)
                      |++ ++
T Consensus       117 e~l~~g  122 (420)
T 2pyw_A          117 RYLEPP  122 (420)
T ss_dssp             CCCCTT
T ss_pred             eecCCc
Confidence            999 75

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=97.89  E-value=0.00014  Score=59.82  Aligned_cols=141  Identities=6%  Similarity=-0.011  Sum_probs=76.5

Q ss_pred             CCeeecccceEEEEEEECCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCce-eeEeeEEecCCcceEEEeeC-CCCCH
Q 026214           67 KNVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHI-LKLIGCCLETPIPILAFESV-EYGNL  144 (241)
Q Consensus        67 ~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~-~~gsL  144 (241)
                      .+.|+.|....+|+.    ..+++|+...... ..-...+|..++..+...++ .+++++  ..+.-++++||+ ++.+|
T Consensus        23 i~~l~gG~tN~~~~~----~~~vlR~~~~~~~-~~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~l   95 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA----GDLCLRIPGKGTE-EYINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQTM   95 (301)
T ss_dssp             CEEEESCSSEEEEEE----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEEC
T ss_pred             eeEcCCcccccccee----eeEEEECCCCCcc-ceeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCccC
Confidence            567888999999998    5688887665421 12234568888877743233 455544  344457899999 65443


Q ss_pred             HH------------------HHhhcCCCCCCCCC-HHHHHHHHHH--------------HHHHHH----HHh-CCCCCCe
Q 026214          145 RD------------------RILSASQPQTEPLL-MKHRLKIAMD--------------IAHALA----YLH-FGFPRPI  186 (241)
Q Consensus       145 ~~------------------~l~~~~~~~~~~l~-~~~~~~i~~~--------------i~~~l~----~lH-~~~~~~i  186 (241)
                      ..                  .++..........+ +..+..+...              +...+.    .+. ......+
T Consensus        96 ~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~l  175 (301)
T 3dxq_A           96 SPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLPLAA  175 (301)
T ss_dssp             CHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCCCCEE
T ss_pred             CHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCcee
Confidence            21                  11111000001111 1111111110              111111    111 1224568


Q ss_pred             EEccCCCCCeeEcCCCcEEEccccCceec
Q 026214          187 VYRDFKTAHILFNEENVAKMFDFSLSISI  215 (241)
Q Consensus       187 vH~dlk~~Nill~~~~~~ki~DfG~a~~~  215 (241)
                      +|+|+.|.||+ ..++.+.++||..+..-
T Consensus       176 ~HgDl~~~Nil-~~~~~~~lID~e~a~~g  203 (301)
T 3dxq_A          176 CHCDPLCENFL-DTGERMWIVDWEYSGMN  203 (301)
T ss_dssp             ECSCCCGGGEE-ECSSCEEECCCTTCEEE
T ss_pred             eccCCCcCCEE-ECCCCEEEEecccccCC
Confidence            99999999999 56677899999988643

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=97.88  E-value=0.00056  Score=56.51  Aligned_cols=162  Identities=14%  Similarity=0.103  Sum_probs=88.1

Q ss_pred             ccCHHHHHHHhcCCCcC-----CeeecccceEEEEEEECCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCc--eeeEe
Q 026214           51 IFSAQELKLATNNYDQK-----NVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQMSHDH--ILKLI  123 (241)
Q Consensus        51 ~~~~~~~~~~~~~~~~~-----~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~  123 (241)
                      .++.+++......|...     +.|+.|....+|+...++..+++|......  ....+..|+.++..+...+  +++++
T Consensus         6 ~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~   83 (322)
T 2ppq_A            6 DITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKDPLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPL   83 (322)
T ss_dssp             CCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSCCEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred             cCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCccEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCccc
Confidence            35566666666667542     345667778899998755578899876531  2344567777777773222  23333


Q ss_pred             eE------EecCCcceEEEeeCCCCCHHH--------------HHhhcCCC--CC--CCC---CHHHHHH----------
Q 026214          124 GC------CLETPIPILAFESVEYGNLRD--------------RILSASQP--QT--EPL---LMKHRLK----------  166 (241)
Q Consensus       124 ~~------~~~~~~~~lv~e~~~~gsL~~--------------~l~~~~~~--~~--~~l---~~~~~~~----------  166 (241)
                      ..      ....+..+++++|++|.++..              .++.....  ..  ...   .|.....          
T Consensus        84 ~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~  163 (322)
T 2ppq_A           84 PRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVE  163 (322)
T ss_dssp             CBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTS
T ss_pred             CCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhh
Confidence            21      122356789999998754311              11211000  00  001   1221100          


Q ss_pred             --HHHHHHHHHHHHhC----CCCCCeEEccCCCCCeeEcCCCcEEEccccCcee
Q 026214          167 --IAMDIAHALAYLHF----GFPRPIVYRDFKTAHILFNEENVAKMFDFSLSIS  214 (241)
Q Consensus       167 --i~~~i~~~l~~lH~----~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~  214 (241)
                        +...+...+.++..    .....++|+|+.+.|||++.+..+.|+||+.+..
T Consensus       164 ~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~  217 (322)
T 2ppq_A          164 KGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN  217 (322)
T ss_dssp             TTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             hhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence              00113334444431    1135789999999999998876668999998754

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=97.87  E-value=0.0002  Score=58.44  Aligned_cols=77  Identities=12%  Similarity=0.000  Sum_probs=55.4

Q ss_pred             CCCcCCeeecccceEEEEEEE-CCeEEEEEEeeccCCcchhhHHHHHHHHHhcC-C--CceeeEeeEEecCCcceEEEee
Q 026214           63 NYDQKNVITEDWGCILYKGFW-QERLISVMRFRESNRDGHGSCINNIVYAAQMS-H--DHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h--~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      .......+|.|..+.||+... +|+.|.+|+...........|..|...|+.|. .  --+++++++.    ..+++|||
T Consensus        16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~   91 (288)
T 3f7w_A           16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEW   91 (288)
T ss_dssp             CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEEC
T ss_pred             CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEe
Confidence            344557789999999999998 88999999876554444456788999998884 2  1244555442    35789999


Q ss_pred             CCCCC
Q 026214          139 VEYGN  143 (241)
Q Consensus       139 ~~~gs  143 (241)
                      +.++.
T Consensus        92 l~~~~   96 (288)
T 3f7w_A           92 VDERP   96 (288)
T ss_dssp             CCCCC
T ss_pred             ecccC
Confidence            87654

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=97.76  E-value=0.00096  Score=55.26  Aligned_cols=163  Identities=12%  Similarity=0.084  Sum_probs=89.2

Q ss_pred             ccccCHHHHHHHhcCCCc-----CCeeecccceEEEEEEE-CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCc--ee
Q 026214           49 YRIFSAQELKLATNNYDQ-----KNVITEDWGCILYKGFW-QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDH--IL  120 (241)
Q Consensus        49 ~~~~~~~~~~~~~~~~~~-----~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv  120 (241)
                      +..++.+++......|..     ...++ |....||+... ++..+++|...... .....+..|..++..+....  ++
T Consensus         8 ~~~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp   85 (328)
T 1zyl_A            8 FQTLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVA   85 (328)
T ss_dssp             CCCCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBC
T ss_pred             CCCCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeec
Confidence            444555555544444422     23466 77788998876 56689999886432 23456777888887774222  34


Q ss_pred             eEeeE-----EecCCcceEEEeeCCCCCHH-----H------H---Hhhc----CCCCCCCCCHHHH-------------
Q 026214          121 KLIGC-----CLETPIPILAFESVEYGNLR-----D------R---ILSA----SQPQTEPLLMKHR-------------  164 (241)
Q Consensus       121 ~l~~~-----~~~~~~~~lv~e~~~~gsL~-----~------~---l~~~----~~~~~~~l~~~~~-------------  164 (241)
                      +++..     ....+..++++++++|.++.     .      .   ++..    ........++...             
T Consensus        86 ~~~~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  165 (328)
T 1zyl_A           86 APVAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATL  165 (328)
T ss_dssp             CCCCBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSS
T ss_pred             ceeecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCc
Confidence            44432     11244567899999864321     1      1   1111    0000111222211             


Q ss_pred             ---------HHHHHHHHHHHHHHhC-CCCCCeEEccCCCCCeeEcCCCcEEEccccCceec
Q 026214          165 ---------LKIAMDIAHALAYLHF-GFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI  215 (241)
Q Consensus       165 ---------~~i~~~i~~~l~~lH~-~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~  215 (241)
                               ...+..++..+.-+-. .....++|+|+++.|||++ + .+.|+||+.+..-
T Consensus       166 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~g  224 (328)
T 1zyl_A          166 IPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARNG  224 (328)
T ss_dssp             SCTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCcC
Confidence                     1111222222222211 1245689999999999998 4 8999999887543

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=97.73  E-value=0.00039  Score=57.92  Aligned_cols=145  Identities=13%  Similarity=0.065  Sum_probs=74.5

Q ss_pred             CeeecccceE-EEEEEE-CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCC--CceeeEeeEEecCCcceEEEeeCCCCC
Q 026214           68 NVITEDWGCI-LYKGFW-QERLISVMRFRESNRDGHGSCINNIVYAAQMSH--DHILKLIGCCLETPIPILAFESVEYGN  143 (241)
Q Consensus        68 ~~lg~G~~g~-Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~~~gs  143 (241)
                      +.|+.|.... +|+... ++..+++|......   ...+..|+.++..+..  -.+++++.+....  -+++||++.+.+
T Consensus        24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~---~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~--g~ll~e~l~~~~   98 (333)
T 3csv_A           24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEE---GGDTQPFVDLAQYLRNLDISAPEIYAEEHAR--GLLLIEDLGDAL   98 (333)
T ss_dssp             CC--------CCEEEECTTCCEEEEEECCTTT---TCCSHHHHHHHHHHHHTTCBCCCEEEEETTT--TEEEECCCCSCB
T ss_pred             eECCCCCCCceEEEEEcCCCCeEEEEECCCCC---CccccHHHHHHHHHHhCCCCCCceeeecCCC--CEEEEeeCCCcc
Confidence            3455554433 667765 37777777654432   1334567777776632  2345666554333  378999997766


Q ss_pred             HHHHHhhcC---------------------CCCCCCCCHHHHH-------H-HH------------HHHHHHHHHHh---
Q 026214          144 LRDRILSAS---------------------QPQTEPLLMKHRL-------K-IA------------MDIAHALAYLH---  179 (241)
Q Consensus       144 L~~~l~~~~---------------------~~~~~~l~~~~~~-------~-i~------------~~i~~~l~~lH---  179 (241)
                      +.+.+....                     ......++.....       . +.            ..+...+..+.   
T Consensus        99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~  178 (333)
T 3csv_A           99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ  178 (333)
T ss_dssp             HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence            655442210                     0001112221110       0 00            01111122221   


Q ss_pred             CCCCCCeEEccCCCCCeeEcCC----CcEEEccccCceecCC
Q 026214          180 FGFPRPIVYRDFKTAHILFNEE----NVAKMFDFSLSISIPE  217 (241)
Q Consensus       180 ~~~~~~ivH~dlk~~Nill~~~----~~~ki~DfG~a~~~~~  217 (241)
                      ......++|+|+.+.|||++.+    ..+.|+||+.+..-++
T Consensus       179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G~~  220 (333)
T 3csv_A          179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGHR  220 (333)
T ss_dssp             CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEECT
T ss_pred             ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcCCC
Confidence            1125679999999999999874    6799999998875443

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=97.53  E-value=0.00064  Score=58.00  Aligned_cols=143  Identities=15%  Similarity=0.128  Sum_probs=81.3

Q ss_pred             CeeecccceEEEEEEEC---------CeEEEEEEeeccCCcchhhHHHHHHHHHhcC-CCceeeEeeEEecCCcceEEEe
Q 026214           68 NVITEDWGCILYKGFWQ---------ERLISVMRFRESNRDGHGSCINNIVYAAQMS-HDHILKLIGCCLETPIPILAFE  137 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e  137 (241)
                      +.|..|-...+|++...         +..+.+|+.... ........+|..+++.|. +.-..++++++..    .+|+|
T Consensus        56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e  130 (379)
T 3feg_A           56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ  130 (379)
T ss_dssp             EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred             EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence            45666777888998862         367888875332 224456678999988884 3223566655543    28999


Q ss_pred             eCCCCCHHH--------------HH---hhcCCCCCCCCC--HHHHHHHHHHHHH-------------------HHHHH-
Q 026214          138 SVEYGNLRD--------------RI---LSASQPQTEPLL--MKHRLKIAMDIAH-------------------ALAYL-  178 (241)
Q Consensus       138 ~~~~gsL~~--------------~l---~~~~~~~~~~l~--~~~~~~i~~~i~~-------------------~l~~l-  178 (241)
                      |++|.+|..              .+   +...-.......  +..+..+..++..                   .+.+| 
T Consensus       131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~  210 (379)
T 3feg_A          131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR  210 (379)
T ss_dssp             CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred             EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence            998754421              11   111000111122  3445555544322                   12222 


Q ss_pred             ---h-CCCCCCeEEccCCCCCeeEcCC----CcEEEccccCceec
Q 026214          179 ---H-FGFPRPIVYRDFKTAHILFNEE----NVAKMFDFSLSISI  215 (241)
Q Consensus       179 ---H-~~~~~~ivH~dlk~~Nill~~~----~~~ki~DfG~a~~~  215 (241)
                         . ......++|+|+.+.|||++.+    +.+.++||..|..-
T Consensus       211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~~  255 (379)
T 3feg_A          211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSYN  255 (379)
T ss_dssp             HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEEE
T ss_pred             HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCcC
Confidence               2 1224578999999999999876    78999999988643

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=97.46  E-value=0.00058  Score=59.25  Aligned_cols=71  Identities=13%  Similarity=0.047  Sum_probs=47.3

Q ss_pred             CCeeecccceEEEEEEEC---------CeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCce-eeEeeEEecCCcceEEE
Q 026214           67 KNVITEDWGCILYKGFWQ---------ERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHI-LKLIGCCLETPIPILAF  136 (241)
Q Consensus        67 ~~~lg~G~~g~Vy~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~  136 (241)
                      .+.|+.|....+|++...         +..+++|+.....  ....+.+|..++..+...++ +++++.+.  +  .+++
T Consensus        78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~--~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--g~v~  151 (429)
T 1nw1_A           78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE--TESHLVAESVIFTLLSERHLGPKLYGIFS--G--GRLE  151 (429)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC--CHHHHHHHHHHHHHHHHTTSSSCEEEEET--T--EEEE
T ss_pred             EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC--cHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--CEEE
Confidence            356778888899999873         4678888874321  12556789999888843333 56666543  2  3889


Q ss_pred             eeCCCCC
Q 026214          137 ESVEYGN  143 (241)
Q Consensus       137 e~~~~gs  143 (241)
                      ||++|.+
T Consensus       152 e~l~G~~  158 (429)
T 1nw1_A          152 EYIPSRP  158 (429)
T ss_dssp             CCCCEEE
T ss_pred             EEeCCcc
Confidence            9998533

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=97.26  E-value=0.0014  Score=55.44  Aligned_cols=71  Identities=13%  Similarity=-0.038  Sum_probs=42.2

Q ss_pred             CeeecccceEEEEEEECC----------eEEEEEEeeccCCcchhhHHHHHHHHHhcCCCc-eeeEeeEEecCCcceEEE
Q 026214           68 NVITEDWGCILYKGFWQE----------RLISVMRFRESNRDGHGSCINNIVYAAQMSHDH-ILKLIGCCLETPIPILAF  136 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~~~----------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~  136 (241)
                      ..|+.|..-.+|++...+          ..+++|...... ........|..++..+...+ .+++++..  .  -++++
T Consensus        39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~  113 (369)
T 3c5i_A           39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV-DELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIE  113 (369)
T ss_dssp             EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG-GGTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEE
T ss_pred             EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc-cceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEE
Confidence            456777778899998743          678888765432 12223467888888874333 34565443  2  37899


Q ss_pred             eeCCCCC
Q 026214          137 ESVEYGN  143 (241)
Q Consensus       137 e~~~~gs  143 (241)
                      ||++|.+
T Consensus       114 e~i~G~~  120 (369)
T 3c5i_A          114 EWLYGDP  120 (369)
T ss_dssp             ECCCSEE
T ss_pred             EEecCCc
Confidence            9998643

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=97.17  E-value=0.0056  Score=53.51  Aligned_cols=72  Identities=13%  Similarity=-0.082  Sum_probs=45.9

Q ss_pred             CeeecccceEEEEEEECC--eEEEEEEeeccCCcchhhHHHHHHHHHhcCCCce-eeEeeEEecCCcceEEEeeCCCCCH
Q 026214           68 NVITEDWGCILYKGFWQE--RLISVMRFRESNRDGHGSCINNIVYAAQMSHDHI-LKLIGCCLETPIPILAFESVEYGNL  144 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~~~--~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~~~gsL  144 (241)
                      +.|+.|-...+|++...+  ..+++|+..... ...-.-.+|..++..|...++ +++++.+.  +  .+++||++|.+|
T Consensus       114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~-~~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~l  188 (458)
T 2qg7_A          114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKT-DEIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYAL  188 (458)
T ss_dssp             EEECC--CEEEEEEEETTTTEEEEEEEECC-C-CSCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEEC
T ss_pred             EEcCCCeEeEEEEEEECCCCceEEEEECCCCh-hhhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCccC
Confidence            467778888999998854  888888764432 111122588999998865444 46666652  2  359999986433

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=97.00  E-value=0.0045  Score=51.78  Aligned_cols=34  Identities=15%  Similarity=0.305  Sum_probs=29.1

Q ss_pred             CCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          183 PRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       183 ~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ...++|+|+.+.||+++.++.+.|+||+.+..-+
T Consensus       205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~~  238 (339)
T 3i1a_A          205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPMLAP  238 (339)
T ss_dssp             GCEEECSCCCGGGEEECGGGCEEECCCSSCEEEC
T ss_pred             CceeEeCCCCcCCEEEeCCCeEEEEECCCCeeCC
Confidence            3578999999999999887889999998876544

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=96.17  E-value=0.052  Score=46.89  Aligned_cols=141  Identities=15%  Similarity=0.102  Sum_probs=82.1

Q ss_pred             CeeecccceEEEEEEEC---------CeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCc-eeeEeeEEecCCcceEEEe
Q 026214           68 NVITEDWGCILYKGFWQ---------ERLISVMRFRESNRDGHGSCINNIVYAAQMSHDH-ILKLIGCCLETPIPILAFE  137 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~e  137 (241)
                      +.+..|-...+|+....         +..+++++..... ...-.-.+|..+++.+...+ .+++++.+  .  .++|+|
T Consensus        76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~I~e  150 (424)
T 3mes_A           76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADF--P--EGRIEE  150 (424)
T ss_dssp             EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEE
T ss_pred             EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCEEEE
Confidence            45667777889999874         5788888854432 22223467888888884322 34555433  2  378999


Q ss_pred             eCCCCCHHH--------------HH---hhc-C---C-C---CCCCCCHHHHHHHHHHH-------------------HH
Q 026214          138 SVEYGNLRD--------------RI---LSA-S---Q-P---QTEPLLMKHRLKIAMDI-------------------AH  173 (241)
Q Consensus       138 ~~~~gsL~~--------------~l---~~~-~---~-~---~~~~l~~~~~~~i~~~i-------------------~~  173 (241)
                      |++|.+|..              .+   +.. .   . .   ...+..+..+..+..++                   ..
T Consensus       151 fI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~  230 (424)
T 3mes_A          151 FIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKILE  230 (424)
T ss_dssp             CCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHHHH
T ss_pred             EeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHHHH
Confidence            999755321              01   100 0   0 0   11122244444443222                   12


Q ss_pred             HHHHHh---------------------CCCCCCeEEccCCCCCeeEcCCCcEEEccccCcee
Q 026214          174 ALAYLH---------------------FGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSIS  214 (241)
Q Consensus       174 ~l~~lH---------------------~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~  214 (241)
                      .+.+|.                     ......++|+|+.+.||+ +.++.+.++||..|..
T Consensus       231 e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~  291 (424)
T 3mes_A          231 EIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI  291 (424)
T ss_dssp             HHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred             HHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence            233332                     111346899999999999 7888999999998864

>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}

Probab=91.04  E-value=0.81  Score=35.60  Aligned_cols=89  Identities=9%  Similarity=0.055  Sum_probs=62.6

Q ss_pred             CCCceeeEeeEEecCCcceEEEeeCCCC-CHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHH-HHhCCCCCCeEEccCC
Q 026214          115 SHDHILKLIGCCLETPIPILAFESVEYG-NLRDRILSASQPQTEPLLMKHRLKIAMDIAHALA-YLHFGFPRPIVYRDFK  192 (241)
Q Consensus       115 ~h~niv~l~~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~-~lH~~~~~~ivH~dlk  192 (241)
                      .||++  -..+-.+.+...+.++.-+++ ++. .+.        .++....++++..++.... +++     .-+|--|.
T Consensus        48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~-~i~--------~~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~  111 (219)
T 4ano_A           48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFA-AIR--------KTTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVC  111 (219)
T ss_dssp             SCSSS--EEEEEECSSEEEEEEECCTTCEEHH-HHH--------TSCHHHHHHHHHHHHHHHSSCCS-----SSEECCCC
T ss_pred             cCCCC--CeEEEEeCCEEEEEEEcCcccCcHH-HHH--------hcCHHHHHHHHHHHHHHHHHhhh-----CceeEEEe
Confidence            68888  333445666666666654333 333 331        2677888888888777665 444     55788999


Q ss_pred             CCCeeEcCCCcEEEccccCceecCCCC
Q 026214          193 TAHILFNEENVAKMFDFSLSISIPEGG  219 (241)
Q Consensus       193 ~~Nill~~~~~~ki~DfG~a~~~~~~~  219 (241)
                      |+|++++.++.++|.-.|+-..++|-.
T Consensus       112 P~NL~f~~~~~p~i~hRGi~~~lpP~e  138 (219)
T 4ano_A          112 PENLMFNRALEPFFLHVGVKESLPPDE  138 (219)
T ss_dssp             GGGEEECTTCCEEESCCEETTTBSSCS
T ss_pred             CceEEEeCCCcEEEEEcCCcccCCCCC
Confidence            999999999999999999987776654

>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}

Probab=90.09  E-value=0.41  Score=37.16  Aligned_cols=92  Identities=5%  Similarity=-0.039  Sum_probs=64.5

Q ss_pred             cCCCceeeEeeEEecCCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCC
Q 026214          114 MSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKT  193 (241)
Q Consensus       114 l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~  193 (241)
                      ..||++++. .+-...+...+.++.-+  +...+-.      -...+....++++..|+....+++     .-+|--|.|
T Consensus        42 ~~~~~Fl~~-~I~e~eD~v~~~y~~~~--~~~~f~~------ik~~~~~eKlr~l~ni~~l~~~~~-----~r~tf~L~P  107 (215)
T 4ann_A           42 QHSPYFIDA-ELTELRDSFQIHYDIND--NHTPFDN------IKSFTKNEKLRYLLNIKNLEEVNR-----TRYTFVLAP  107 (215)
T ss_dssp             SCCTTBCCE-EEEECSSEEEEEECCCT--TSEEGGG------GGGSCHHHHHHHHHHGGGGGGGGG-----SSEECCCSG
T ss_pred             ccCCcccce-EEEEcccEEEEEEEcCc--ccCCHHH------HHhcCHHHHHHHHHHHHHHHHHhc-----CceEEEEec
Confidence            368988877 45555665555554332  2222221      123677888899999888876555     346888999


Q ss_pred             CCeeEcCCCcEEEccccCceecCCCC
Q 026214          194 AHILFNEENVAKMFDFSLSISIPEGG  219 (241)
Q Consensus       194 ~Nill~~~~~~ki~DfG~a~~~~~~~  219 (241)
                      +|++++.++.+++.=.|+...+++-.
T Consensus       108 ~NL~f~~~~~p~i~~RGik~~l~P~~  133 (215)
T 4ann_A          108 DELFFTRDGLPIAKTRGLQNVVDPLP  133 (215)
T ss_dssp             GGEEECTTSCEEESCCEETTTBSCCC
T ss_pred             ceEEEcCCCCEEEEEccCccCCCCCC
Confidence            99999999999999999877776653

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=88.08  E-value=0.26  Score=41.97  Aligned_cols=30  Identities=23%  Similarity=0.341  Sum_probs=25.3

Q ss_pred             CeEEccCCCCCeeE------cCCCcEEEccccCcee
Q 026214          185 PIVYRDFKTAHILF------NEENVAKMFDFSLSIS  214 (241)
Q Consensus       185 ~ivH~dlk~~Nill------~~~~~~ki~DfG~a~~  214 (241)
                      .++|+|+.+.|||+      ++...+.++||..|..
T Consensus       245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~  280 (401)
T 3g15_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred             eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence            46799999999999      3467799999998864

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=87.57  E-value=0.048  Score=47.62  Aligned_cols=59  Identities=5%  Similarity=-0.140  Sum_probs=17.4

Q ss_pred             cCCeeecccceEEEEEEEC--CeEEEE------EEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEe
Q 026214           66 QKNVITEDWGCILYKGFWQ--ERLISV------MRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCL  127 (241)
Q Consensus        66 ~~~~lg~G~~g~Vy~~~~~--~~~vav------K~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~  127 (241)
                      ..+.||   ||.||++.+.  ..+||+      |......  ......+.+|..++..++|||+++.+++-.
T Consensus       146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~  214 (463)
T 3cxl_A          146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV  214 (463)
T ss_dssp             STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred             ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence            345666   9999999993  357888      6655432  122356888999999999999999987664

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	241
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	3e-19
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	1e-18
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	4e-18
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	7e-18
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	3e-17
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	5e-16
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	2e-15
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	2e-15
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	2e-15
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	2e-15
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	3e-15
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	4e-15
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	5e-15
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	7e-15
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	9e-15
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	9e-15
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	3e-14
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	4e-14
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	5e-14
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	5e-14
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	1e-13
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	1e-13
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	1e-13
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	2e-13
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	2e-13
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	3e-13
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	6e-13
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	2e-12
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	2e-12
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	4e-12
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	1e-11
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	2e-11
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	2e-11
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	3e-11
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	3e-11
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	1e-10
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	2e-10
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	4e-10
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	4e-10
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	6e-10
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	9e-10
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	9e-10
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	1e-09
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	2e-09
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	3e-09
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	5e-09
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	5e-09
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	7e-09
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	1e-08
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	2e-08
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	2e-08
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	5e-08
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	8e-08
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	1e-07
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	1e-07
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	3e-07
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-06
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	2e-06
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	9e-06
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	5e-05
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	1e-04

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.9 bits (202), Expect = 3e-19
 Identities = 29/144 (20%), Positives = 53/144 (36%), Gaps = 9/144 (6%)

Query: 79  YKGFWQERL-ISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFE 137
           YKG W   + + ++           +  N +    +  H +IL  +G     P   +  +
Sbjct: 25  YKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ 83

Query: 138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHIL 197
             E  +L   +                + IA   A  + YLH    + I++RD K+ +I 
Sbjct: 84  WCEGSSLYHHLHIIETKFEM----IKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIF 136

Query: 198 FNEENVAKMFDFSLSISIPEGGTS 221
            +E+   K+ DF L+        S
Sbjct: 137 LHEDLTVKIGDFGLATVKSRWSGS 160

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.3 bits (200), Expect = 1e-18
 Identities = 24/168 (14%), Positives = 68/168 (40%), Gaps = 10/168 (5%)

Query: 57  LKLATNNYDQKNVITEDWGCILYKGFWQE--RLISVMRFRESNRDGHGSCINN-IVYAAQ 113
           ++L  +++++ + +    G +++K   +    +++        +    + I   +    +
Sbjct: 1   MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60

Query: 114 MSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAH 173
            +  +I+   G         +  E ++ G+L   +      +   +  +   K+++ +  
Sbjct: 61  CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL-----KKAGRIPEQILGKVSIAVIK 115

Query: 174 ALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTS 221
            L YL       I++RD K ++IL N     K+ DF +S  + +   +
Sbjct: 116 GLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN 161

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.3 bits (195), Expect = 4e-18
 Identities = 32/145 (22%), Positives = 51/145 (35%), Gaps = 9/145 (6%)

Query: 79  YKGFWQE--RLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF 136
           YK   +E   L +       + +     +  I   A   H +I+KL+          +  
Sbjct: 29  YKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILI 88

Query: 137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHI 196
           E    G +   +L   +P TE         +      AL YLH      I++RD K  +I
Sbjct: 89  EFCAGGAVDAVMLELERPLTE----SQIQVVCKQTLDALNYLHD---NKIIHRDLKAGNI 141

Query: 197 LFNEENVAKMFDFSLSISIPEGGTS 221
           LF  +   K+ DF +S         
Sbjct: 142 LFTLDGDIKLADFGVSAKNTRTIQR 166

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.1 bits (192), Expect = 7e-18
 Identities = 33/145 (22%), Positives = 65/145 (44%), Gaps = 9/145 (6%)

Query: 79  YKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPI-LAFE 137
             G ++   ++V   +  N     + +       Q+ H ++++L+G  +E    + +  E
Sbjct: 24  MLGDYRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 81

Query: 138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHIL 197
            +  G+L D + S  +     L     LK ++D+  A+ YL        V+RD    ++L
Sbjct: 82  YMAKGSLVDYLRSRGRS---VLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVL 135

Query: 198 FNEENVAKMFDFSLSISIPEGGTSG 222
            +E+NVAK+ DF L+        +G
Sbjct: 136 VSEDNVAKVSDFGLTKEASSTQDTG 160

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.6 bits (188), Expect = 3e-17
 Identities = 31/143 (21%), Positives = 64/143 (44%), Gaps = 9/143 (6%)

Query: 79  YKGFWQ-ERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFE 137
           + G++     ++V   ++ +     + +       Q+ H  +++L     + PI I+  E
Sbjct: 30  WMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVTQEPIYII-TE 87

Query: 138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHIL 197
            +E G+L D +     P    L +   L +A  IA  +A++     R  ++RD + A+IL
Sbjct: 88  YMENGSLVDFLK---TPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANIL 141

Query: 198 FNEENVAKMFDFSLSISIPEGGT 220
            ++    K+ DF L+  I +   
Sbjct: 142 VSDTLSCKIADFGLARLIEDNEY 164

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.1 bits (179), Expect = 5e-16
 Identities = 24/134 (17%), Positives = 51/134 (38%), Gaps = 9/134 (6%)

Query: 88  ISVMRFRESNRDGHGSCINN-IVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRD 146
           + V+   +  + G    +   +   + + H +IL+L G   +     L  E    G +  
Sbjct: 36  LKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR 95

Query: 147 RILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKM 206
            +      +      +       ++A+AL+Y H    + +++RD K  ++L       K+
Sbjct: 96  EL-----QKLSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKI 147

Query: 207 FDFSLSISIPEGGT 220
            DF  S+  P    
Sbjct: 148 ADFGWSVHAPSSRR 161

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.7 bits (175), Expect = 2e-15
 Identities = 28/148 (18%), Positives = 62/148 (41%), Gaps = 15/148 (10%)

Query: 79  YKGFWQERL------ISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIP 132
            KG++Q +       + +++   ++       +       Q+ + +I+++IG C E    
Sbjct: 24  KKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESW 82

Query: 133 ILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFK 192
           +L  E  E G L   +      Q   +  K+ +++   ++  + YL        V+RD  
Sbjct: 83  MLVMEMAELGPLNKYL-----QQNRHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLA 134

Query: 193 TAHILFNEENVAKMFDFSLSISIPEGGT 220
             ++L   ++ AK+ DF LS ++     
Sbjct: 135 ARNVLLVTQHYAKISDFGLSKALRADEN 162

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.8 bits (175), Expect = 2e-15
 Identities = 30/152 (19%), Positives = 59/152 (38%), Gaps = 16/152 (10%)

Query: 79  YKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPI----L 134
           ++G W+   ++V  F  S  +        I     + H++IL  I    +         L
Sbjct: 20  WRGKWRGEEVAVKIFS-SREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78

Query: 135 AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLH-----FGFPRPIVYR 189
             +  E+G+L D +          + ++  +K+A+  A  LA+LH           I +R
Sbjct: 79  VSDYHEHGSLFDYL------NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHR 132

Query: 190 DFKTAHILFNEENVAKMFDFSLSISIPEGGTS 221
           D K+ +IL  +     + D  L++       +
Sbjct: 133 DLKSKNILVKKNGTCCIADLGLAVRHDSATDT 164

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.1 bits (176), Expect = 2e-15
 Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 21/126 (16%)

Query: 114 MSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTE---------------- 157
            SH++I+ L+G C  +    L FE   YG+L + + S  +  +E                
Sbjct: 98  GSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEED 157

Query: 158 --PLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
              L  +  L  A  +A  + +L F   +  V+RD    ++L     V K+ DF L+  I
Sbjct: 158 LNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDI 214

Query: 216 PEGGTS 221
                 
Sbjct: 215 MSDSNY 220

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.2 bits (174), Expect = 2e-15
 Identities = 19/137 (13%), Positives = 53/137 (38%), Gaps = 5/137 (3%)

Query: 88  ISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETP--IPILAFESVEYGNLR 145
              + +           ++ +    ++ H +I++     ++       +  E  E G+L 
Sbjct: 34  WKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLA 93

Query: 146 DRILSASQPQTEPLLMKHRLKIAMDIAHALAYLH--FGFPRPIVYRDFKTAHILFNEENV 203
             +++    + + L  +  L++   +  AL   H        +++RD K A++  + +  
Sbjct: 94  S-VITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQN 152

Query: 204 AKMFDFSLSISIPEGGT 220
            K+ DF L+  +    +
Sbjct: 153 VKLGDFGLARILNHDTS 169

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.9 bits (173), Expect = 3e-15
 Identities = 27/144 (18%), Positives = 60/144 (41%), Gaps = 9/144 (6%)

Query: 79  YKGFWQ-ERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFE 137
             G W+ +  +++   +E +       I        +SH+ +++L G C +     +  E
Sbjct: 21  KYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE 79

Query: 138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHIL 197
            +  G L + +    +        +  L++  D+  A+ YL     +  ++RD    + L
Sbjct: 80  YMANGCLLNYL----REMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCL 132

Query: 198 FNEENVAKMFDFSLSISIPEGGTS 221
            N++ V K+ DF LS  + +   +
Sbjct: 133 VNDQGVVKVSDFGLSRYVLDDEYT 156

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 70.8 bits (173), Expect = 4e-15
 Identities = 25/147 (17%), Positives = 52/147 (35%), Gaps = 13/147 (8%)

Query: 79  YKGFWQE--RLISVMRFRESNRDGHG---SCINNIVYAAQMSHDHILKLIGCCLETPIPI 133
           Y         ++++ +   S +  +      I  + +  ++ H + ++  GC L      
Sbjct: 32  YFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAW 91

Query: 134 LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKT 193
           L  E           +       +PL       +       LAYLH      +++RD K 
Sbjct: 92  LVMEYCLGSASDLLEV-----HKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKA 143

Query: 194 AHILFNEENVAKMFDFSLSISIPEGGT 220
            +IL +E  + K+ DF  +  +    +
Sbjct: 144 GNILLSEPGLVKLGDFGSASIMAPANS 170

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.4 bits (172), Expect = 5e-15
 Identities = 23/144 (15%), Positives = 51/144 (35%), Gaps = 11/144 (7%)

Query: 79  YKGFWQE--RLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF 136
           Y        + +++ +     +      IN I+   +  + +I+  +   L      +  
Sbjct: 37  YTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 96

Query: 137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHI 196
           E +  G+L D +      +           +  +   AL +LH      +++RD K+ +I
Sbjct: 97  EYLAGGSLTDVVTETCMDE------GQIAAVCRECLQALEFLH---SNQVIHRDIKSDNI 147

Query: 197 LFNEENVAKMFDFSLSISIPEGGT 220
           L   +   K+ DF     I    +
Sbjct: 148 LLGMDGSVKLTDFGFCAQITPEQS 171

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.7 bits (170), Expect = 7e-15
 Identities = 28/172 (16%), Positives = 71/172 (41%), Gaps = 14/172 (8%)

Query: 55  QELKLATNNYDQKNV-ITEDWGCILYKGFWQER----LISVMRFRESNRDGHGSCINN-I 108
           ++L L  +N    ++ +       + +G ++ R     +++   ++         +    
Sbjct: 1   KKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREA 60

Query: 109 VYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIA 168
               Q+ + +I++LIG C +    +L  E    G L   ++     + E + + +  ++ 
Sbjct: 61  QIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVG----KREEIPVSNVAELL 115

Query: 169 MDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGT 220
             ++  + YL     +  V+RD    ++L    + AK+ DF LS ++    +
Sbjct: 116 HQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDS 164

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 69.8 bits (170), Expect = 9e-15
 Identities = 31/184 (16%), Positives = 64/184 (34%), Gaps = 22/184 (11%)

Query: 52  FSAQELKLATNNYDQK---------NVITEDWGCILYKGFW-----QERLISVMRFRES- 96
           F+ ++   A   + ++          VI       +  G       +E  +++   +   
Sbjct: 7   FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66

Query: 97  NRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQT 156
                   ++      Q  H +++ L G   ++   ++  E +E G+L   +       T
Sbjct: 67  TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFT 126

Query: 157 EPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP 216
                   + +   IA  + YL        V+RD    +IL N   V K+ DF LS  + 
Sbjct: 127 V----IQLVGMLRGIAAGMKYLAD---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLE 179

Query: 217 EGGT 220
           +  +
Sbjct: 180 DDTS 183

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.3 bits (169), Expect = 9e-15
 Identities = 33/150 (22%), Positives = 63/150 (42%), Gaps = 9/150 (6%)

Query: 79  YKGFWQE-RLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFE 137
           + G+W     +++   RE         I       ++SH  +++L G CLE     L FE
Sbjct: 22  HLGYWLNKDKVAIKTIREGAMSEE-DFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFE 80

Query: 138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHIL 197
            +E+G L D + +           +  L + +D+   +AYL       +++RD    + L
Sbjct: 81  FMEHGCLSDYLRTQRGLFAA----ETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCL 133

Query: 198 FNEENVAKMFDFSLSISIPEGGTSGAKCLK 227
             E  V K+ DF ++  + +   + +   K
Sbjct: 134 VGENQVIKVSDFGMTRFVLDDQYTSSTGTK 163

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 68.9 bits (168), Expect = 3e-14
 Identities = 25/151 (16%), Positives = 49/151 (32%), Gaps = 11/151 (7%)

Query: 79  YKGFWQE--RLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF 136
           ++   +   R+               +  N I    Q+ H  ++ L     +    +L  
Sbjct: 46  HRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLIL 105

Query: 137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHI 196
           E +  G L DRI +     +E       +         L ++H      IV+ D K  +I
Sbjct: 106 EFLSGGELFDRIAAEDYKMSE----AEVINYMRQACEGLKHMHE---HSIVHLDIKPENI 158

Query: 197 LF--NEENVAKMFDFSLSISIPEGGTSGAKC 225
           +    + +  K+ DF L+  +          
Sbjct: 159 MCETKKASSVKIIDFGLATKLNPDEIVKVTT 189

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 68.2 bits (166), Expect = 4e-14
 Identities = 19/146 (13%), Positives = 50/146 (34%), Gaps = 11/146 (7%)

Query: 79  YKGFWQE--RLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF 136
           ++   +      +       +     +    I   + + H  ++ L     +    ++ +
Sbjct: 43  HRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIY 102

Query: 137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHI 196
           E +  G L +++       +E       ++    +   L ++H       V+ D K  +I
Sbjct: 103 EFMSGGELFEKVADEHNKMSE----DEAVEYMRQVCKGLCHMHE---NNYVHLDLKPENI 155

Query: 197 LFN--EENVAKMFDFSLSISIPEGGT 220
           +F     N  K+ DF L+  +    +
Sbjct: 156 MFTTKRSNELKLIDFGLTAHLDPKQS 181

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 67.8 bits (165), Expect = 5e-14
 Identities = 32/169 (18%), Positives = 72/169 (42%), Gaps = 9/169 (5%)

Query: 55  QELKLATNNYDQKNVITEDWGCILYKGFWQE--RLISVMRFRESNRDGHGSCINNIVYAA 112
            + ++   +   K+ +       +Y+G W++    ++V   +E   +     +       
Sbjct: 10  DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMK 68

Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
           ++ H ++++L+G C   P   +  E + YGNL D +   ++     +     L +A  I+
Sbjct: 69  EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ---EVSAVVLLYMATQIS 125

Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTS 221
            A+ YL     +  ++RD    + L  E ++ K+ DF LS  +     +
Sbjct: 126 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 171

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.3 bits (164), Expect = 5e-14
 Identities = 27/128 (21%), Positives = 46/128 (35%), Gaps = 8/128 (6%)

Query: 94  RESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQ 153
            +   D   +    I     ++H++++K  G   E  I  L  E    G L DRI     
Sbjct: 40  MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---- 95

Query: 154 PQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSI 213
                +      +    +   + YLH      I +RD K  ++L +E +  K+ DF L+ 
Sbjct: 96  -PDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLAT 151

Query: 214 SIPEGGTS 221
                   
Sbjct: 152 VFRYNNRE 159

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.7 bits (162), Expect = 1e-13
 Identities = 30/144 (20%), Positives = 60/144 (41%), Gaps = 9/144 (6%)

Query: 79  YKGFWQE-RLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFE 137
           + G W     +++   +        + +       ++ H+ +++L     E PI I+  E
Sbjct: 34  WMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIV-TE 91

Query: 138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHIL 197
            +  G+L D +   +        +   + +A  IA  +AY+        V+RD + A+IL
Sbjct: 92  YMSKGSLLDFLKGETGKYLR---LPQLVDMAAQIASGMAYVER---MNYVHRDLRAANIL 145

Query: 198 FNEENVAKMFDFSLSISIPEGGTS 221
             E  V K+ DF L+  I +   +
Sbjct: 146 VGENLVCKVADFGLARLIEDNEYT 169

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 66.4 bits (161), Expect = 1e-13
 Identities = 45/194 (23%), Positives = 72/194 (37%), Gaps = 30/194 (15%)

Query: 55  QELKLATNNYDQKNVITEDWGCILYKGFWQE-------RLISVMRFR-ESNRDGHGSCIN 106
             L+   NN +    I E     +++             +++V   + E++ D       
Sbjct: 6   LSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQR 65

Query: 107 NIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRI------------------ 148
                A+  + +I+KL+G C       L FE + YG+L + +                  
Sbjct: 66  EAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLST 125

Query: 149 -LSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMF 207
               S P   PL    +L IA  +A  +AYL     R  V+RD  T + L  E  V K+ 
Sbjct: 126 RARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIA 182

Query: 208 DFSLSISIPEGGTS 221
           DF LS +I      
Sbjct: 183 DFGLSRNIYSADYY 196

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.4 bits (161), Expect = 1e-13
 Identities = 43/182 (23%), Positives = 72/182 (39%), Gaps = 20/182 (10%)

Query: 62  NNYDQKNVITEDWGCILYKGFW----QERLISVMRFRE-SNRDGHGSCINNIVYAAQMS- 115
           N+   ++VI E     + K            ++ R +E +++D H      +    ++  
Sbjct: 10  NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 69

Query: 116 HDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEP-----------LLMKHR 164
           H +I+ L+G C       LA E   +GNL D +  +   +T+P           L  +  
Sbjct: 70  HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 129

Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAK 224
           L  A D+A  + YL     +  ++RD    +IL  E  VAK+ DF LS            
Sbjct: 130 LHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG 186

Query: 225 CL 226
            L
Sbjct: 187 RL 188

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.0 bits (160), Expect = 2e-13
 Identities = 23/120 (19%), Positives = 47/120 (39%), Gaps = 16/120 (13%)

Query: 115 SHDHILKLIGCCLETPIPILAFESVEYGNLRDRI-------------LSASQPQTEPLLM 161
           +H +I+ L+G C      ++  E   YG+L + +              +  +     L +
Sbjct: 85  NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 144

Query: 162 KHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTS 221
           +  L  +  +A  +A+L     +  ++RD    +IL     + K+ DF L+  I      
Sbjct: 145 EDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 201

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.5 bits (159), Expect = 2e-13
 Identities = 28/151 (18%), Positives = 61/151 (40%), Gaps = 16/151 (10%)

Query: 79  YKGFW-----QERLISVMRFRE---SNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETP 130
            +G W     +   ++V   +    S  +     I  +     + H ++++L G  L  P
Sbjct: 25  RRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP 84

Query: 131 IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRD 190
           + ++  E    G+L DR+           L+    + A+ +A  + YL     +  ++RD
Sbjct: 85  MKMV-TELAPLGSLLDRLRK----HQGHFLLGTLSRYAVQVAEGMGYLES---KRFIHRD 136

Query: 191 FKTAHILFNEENVAKMFDFSLSISIPEGGTS 221
               ++L    ++ K+ DF L  ++P+    
Sbjct: 137 LAARNLLLATRDLVKIGDFGLMRALPQNDDH 167

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.6 bits (159), Expect = 3e-13
 Identities = 33/153 (21%), Positives = 57/153 (37%), Gaps = 14/153 (9%)

Query: 79  YKGFW-----QERLISVMRFRESNRDGHGSCINN-IVYAAQMSHDHILKLIGCCLETPIP 132
           ++G +         +++   +    D          +   Q  H HI+KLIG   E P+ 
Sbjct: 24  HQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVW 83

Query: 133 ILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFK 192
           I+  E    G LR  +                +  A  ++ ALAYL     +  V+RD  
Sbjct: 84  II-MELCTLGELRSFLQVRKYSLDL----ASLILYAYQLSTALAYLE---SKRFVHRDIA 135

Query: 193 TAHILFNEENVAKMFDFSLSISIPEGGTSGAKC 225
             ++L +  +  K+ DF LS  + +     A  
Sbjct: 136 ARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 168

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.7 bits (157), Expect = 6e-13
 Identities = 22/110 (20%), Positives = 39/110 (35%), Gaps = 8/110 (7%)

Query: 112 AQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
           +++ H   +KL     +           + G L   I      +              +I
Sbjct: 63  SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTAEI 117

Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTS 221
             AL YLH    + I++RD K  +IL NE+   ++ DF  +  +      
Sbjct: 118 VSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 164

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 63.2 bits (153), Expect = 2e-12
 Identities = 27/111 (24%), Positives = 44/111 (39%), Gaps = 8/111 (7%)

Query: 115 SHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHA 174
            H +I++L           L F+ ++ G L D +      +   L  K   KI   +   
Sbjct: 68  GHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-----TEKVTLSEKETRKIMRALLEV 122

Query: 175 LAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKC 225
           +  LH      IV+RD K  +IL +++   K+ DF  S  +  G      C
Sbjct: 123 ICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVC 170

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.3 bits (153), Expect = 2e-12
 Identities = 29/150 (19%), Positives = 61/150 (40%), Gaps = 15/150 (10%)

Query: 79  YKGFWQE------RLISVMRFRES-NRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPI 131
           YKG W          +++   RE+ +   +   ++     A + + H+ +L+G CL + +
Sbjct: 26  YKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTV 85

Query: 132 PILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDF 191
            ++  + + +G L D +             ++ L   + IA  + YL     R +V+RD 
Sbjct: 86  QLI-TQLMPFGCLLDYVREHKDNIGS----QYLLNWCVQIAKGMNYLED---RRLVHRDL 137

Query: 192 KTAHILFNEENVAKMFDFSLSISIPEGGTS 221
              ++L       K+ DF L+  +      
Sbjct: 138 AARNVLVKTPQHVKITDFGLAKLLGAEEKE 167

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 62.4 bits (151), Expect = 4e-12
 Identities = 20/109 (18%), Positives = 37/109 (33%), Gaps = 8/109 (7%)

Query: 112 AQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
           +      I+ +              + +  G+L   +      Q            A +I
Sbjct: 62  STGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-----SQHGVFSEADMRFYAAEI 116

Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGT 220
              L ++H    R +VYRD K A+IL +E    ++ D  L+    +   
Sbjct: 117 ILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP 162

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.3 bits (148), Expect = 1e-11
 Identities = 23/113 (20%), Positives = 38/113 (33%), Gaps = 8/113 (7%)

Query: 108 IVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKI 167
            V +    H  +  +              E +  G+L   I            +      
Sbjct: 54  RVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQ-----SCHKFDLSRATFY 108

Query: 168 AMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGT 220
           A +I   L +LH    + IVYRD K  +IL +++   K+ DF +      G  
Sbjct: 109 AAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA 158

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.4 bits (146), Expect = 2e-11
 Identities = 19/116 (16%), Positives = 43/116 (37%), Gaps = 9/116 (7%)

Query: 112 AQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
               H +IL L          ++ FE +   ++ +RI +++    E    +  +     +
Sbjct: 56  NIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNE----REIVSYVHQV 111

Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILF--NEENVAKMFDFSLSISIPEGGTSGAKC 225
             AL +LH      I + D +  +I++     +  K+ +F  +  +  G       
Sbjct: 112 CEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLF 164

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.3 bits (145), Expect = 2e-11
 Identities = 26/145 (17%), Positives = 62/145 (42%), Gaps = 15/145 (10%)

Query: 88  ISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPI-LAFESVEYGNLRD 146
           + +++   ++ +         +      H +++ L+G C +   P+ +  E  ++GNL  
Sbjct: 48  VKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLST 107

Query: 147 RI-----------LSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
            +           ++      + L ++H +  +  +A  + +L     R  ++RD    +
Sbjct: 108 YLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARN 164

Query: 196 ILFNEENVAKMFDFSLSISIPEGGT 220
           IL +E+NV K+ DF L+  I +   
Sbjct: 165 ILLSEKNVVKICDFGLARDIYKDPD 189

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.8 bits (144), Expect = 3e-11
 Identities = 29/159 (18%), Positives = 63/159 (39%), Gaps = 14/159 (8%)

Query: 79  YKGFW-----QERLISVMRFRESNRDGHGSCINN-IVYAAQMSHDHILKLIGCCLETP-I 131
           Y G       ++   +V         G  S      +     SH ++L L+G CL +   
Sbjct: 44  YHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGS 103

Query: 132 PILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDF 191
           P++    +++G+LR+ I    + +T    +K  +   + +A  + +L     +  V+RD 
Sbjct: 104 PLVVLPYMKHGDLRNFI----RNETHNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDL 156

Query: 192 KTAHILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSER 230
              + + +E+   K+ DF L+  + +            +
Sbjct: 157 AARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAK 195

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.2 bits (143), Expect = 3e-11
 Identities = 27/143 (18%), Positives = 49/143 (34%), Gaps = 15/143 (10%)

Query: 79  YKGFW----QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLET----P 130
           YKG       E     ++ R+  +               + H +I++       T     
Sbjct: 26  YKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKK 85

Query: 131 IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRD 190
             +L  E +  G L+  +      + + + +K        I   L +LH   P PI++RD
Sbjct: 86  CIVLVTELMTSGTLKTYL-----KRFKVMKIKVLRSWCRQILKGLQFLHTRTP-PIIHRD 139

Query: 191 FKTAHILFNEEN-VAKMFDFSLS 212
            K  +I         K+ D  L+
Sbjct: 140 LKCDNIFITGPTGSVKIGDLGLA 162

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 58.1 bits (140), Expect = 1e-10
 Identities = 25/150 (16%), Positives = 51/150 (34%), Gaps = 8/150 (5%)

Query: 79  YKGFWQE--RLISVMRFRESNRDGHGSCINN-IVYAAQMSHDHILKLIGCCLETPIPILA 135
                +   +L+++    +   +G    + N I    ++ H +I+ L           L 
Sbjct: 26  ILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLI 85

Query: 136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
            + V  G L DRI+     +      +   ++   +  A+ YLH         +     +
Sbjct: 86  MQLVSGGELFDRIV-----EKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLY 140

Query: 196 ILFNEENVAKMFDFSLSISIPEGGTSGAKC 225
              +E++   + DF LS     G      C
Sbjct: 141 YSLDEDSKIMISDFGLSKMEDPGSVLSTAC 170

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 57.6 bits (138), Expect = 2e-10
 Identities = 25/134 (18%), Positives = 51/134 (38%), Gaps = 8/134 (5%)

Query: 88  ISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDR 147
           +  +R  + +     + I  I    ++ H +I+KL          +L FE ++    +  
Sbjct: 31  LKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLL 90

Query: 148 ILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMF 207
            +         L         + + + +AY H    R +++RD K  ++L N E   K+ 
Sbjct: 91  DV-----CEGGLESVTAKSFLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIA 142

Query: 208 DFSLSISIPEGGTS 221
           DF L+ +       
Sbjct: 143 DFGLARAFGIPVRK 156

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 56.6 bits (136), Expect = 4e-10
 Identities = 26/135 (19%), Positives = 56/135 (41%), Gaps = 9/135 (6%)

Query: 88  ISVMRFRESNRDGHGSCINN-IVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRD 146
           + V++     R       N+  +  + ++H  I+++ G   +     +  + +E G L  
Sbjct: 34  MKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFS 93

Query: 147 RILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKM 206
                   +++          A ++  AL YLH    + I+YRD K  +IL ++    K+
Sbjct: 94  L-----LRKSQRFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKI 145

Query: 207 FDFSLSISIPEGGTS 221
            DF  +  +P+   +
Sbjct: 146 TDFGFAKYVPDVTYT 160

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.4 bits (135), Expect = 4e-10
 Identities = 28/141 (19%), Positives = 53/141 (37%), Gaps = 8/141 (5%)

Query: 88  ISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDR 147
           I +    E+    + + +  I    ++SH +I+ L+          L F+ +E       
Sbjct: 31  IKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVII 90

Query: 148 ILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMF 207
                +  +  L   H     +     L YLH      I++RD K  ++L +E  V K+ 
Sbjct: 91  -----KDNSLVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLA 142

Query: 208 DFSLSISIPEGGTSGAKCLKS 228
           DF L+ S      +    + +
Sbjct: 143 DFGLAKSFGSPNRAYTHQVVT 163

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.0 bits (134), Expect = 6e-10
 Identities = 29/117 (24%), Positives = 48/117 (41%), Gaps = 14/117 (11%)

Query: 115 SHDHILKLIGCCLETPIPILAFESVEYGNLRDRI-----------LSASQPQTEPLLMKH 163
            H +I+ L+G C +     +  E    GNLR+ +            + S    E L  K 
Sbjct: 77  KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 136

Query: 164 RLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGT 220
            +  A  +A  + YL     +  ++RD    ++L  E+NV K+ DF L+  I     
Sbjct: 137 LVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY 190

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.6 bits (133), Expect = 9e-10
 Identities = 28/169 (16%), Positives = 55/169 (32%), Gaps = 13/169 (7%)

Query: 58  KLATNNYDQKNVITEDWGCILYKGFWQE--RLISVMRFRES---NRDGHGSCINNIVYAA 112
           K+  N++D   ++ +     +     +   R  ++   R+     +D     +       
Sbjct: 1   KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60

Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
              H  +  L              E    G L   +      +      +       +I 
Sbjct: 61  NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLS-----RERVFTEERARFYGAEIV 115

Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTS 221
            AL YLH    R +VYRD K  +++ +++   K+ DF L       G +
Sbjct: 116 SALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT 161

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.3 bits (132), Expect = 9e-10
 Identities = 24/133 (18%), Positives = 47/133 (35%), Gaps = 7/133 (5%)

Query: 88  ISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDR 147
           +  +R          + I  I    +++H +I+KL+          L FE +     +  
Sbjct: 32  LKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM 91

Query: 148 ILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMF 207
             S        + +         +   LA+ H      +++RD K  ++L N E   K+ 
Sbjct: 92  DAS----ALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLA 144

Query: 208 DFSLSISIPEGGT 220
           DF L+ +      
Sbjct: 145 DFGLARAFGVPVR 157

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.3 bits (132), Expect = 1e-09
 Identities = 25/133 (18%), Positives = 56/133 (42%), Gaps = 8/133 (6%)

Query: 94  RESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRI----- 148
             ++       +N      + +  H+++L+G   +    ++  E +  G+L+  +     
Sbjct: 60  EAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRP 119

Query: 149 LSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFD 208
             A+ P   P  +   +++A +IA  +AYL+       V+RD    + +  E+   K+ D
Sbjct: 120 AMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGD 176

Query: 209 FSLSISIPEGGTS 221
           F ++  I E    
Sbjct: 177 FGMTRDIYETDYY 189

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.8 bits (131), Expect = 2e-09
 Identities = 21/114 (18%), Positives = 43/114 (37%), Gaps = 12/114 (10%)

Query: 112 AQMSHDHILKLIGCCLET------PIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRL 165
            ++ H +I++L      +          L  + V     R  +        + L + +  
Sbjct: 68  RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR--VARHYSRAKQTLPVIYVK 125

Query: 166 KIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEEN-VAKMFDFSLSISIPEG 218
                +  +LAY+H      I +RD K  ++L + +  V K+ DF  +  +  G
Sbjct: 126 LYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 176

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.9 bits (129), Expect = 3e-09
 Identities = 21/114 (18%), Positives = 42/114 (36%), Gaps = 13/114 (11%)

Query: 114 MSHDHILKLIGCC----LETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAM 169
               HI++++             ++  E ++ G L  RI        +    +   +I  
Sbjct: 62  SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD---QAFTEREASEIMK 118

Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEEN---VAKMFDFSLSISIPEGGT 220
            I  A+ YLH      I +RD K  ++L+  +    + K+ DF  +       +
Sbjct: 119 SIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS 169

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.4 bits (127), Expect = 5e-09
 Identities = 21/133 (15%), Positives = 45/133 (33%), Gaps = 8/133 (6%)

Query: 88  ISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDR 147
           +  +R  + +     S +  I    ++ H +I++L           L FE  +    +  
Sbjct: 32  LKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYF 91

Query: 148 ILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMF 207
                      L  +        +   L + H    R +++RD K  ++L N     K+ 
Sbjct: 92  -----DSCNGDLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLA 143

Query: 208 DFSLSISIPEGGT 220
           +F L+ +      
Sbjct: 144 NFGLARAFGIPVR 156

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.2 bits (127), Expect = 5e-09
 Identities = 27/118 (22%), Positives = 43/118 (36%), Gaps = 12/118 (10%)

Query: 112 AQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
            ++ H +++ L          IL  E V  G L D        + E L  +   +    I
Sbjct: 68  KEIQHPNVITLHEVYENKTDVILILELVAGGELFDF-----LAEKESLTEEEATEFLKQI 122

Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILFNEENVA----KMFDFSLSISIPEGGTSGAKC 225
            + + YLH      I + D K  +I+  + NV     K+ DF L+  I  G       
Sbjct: 123 LNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF 177

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.9 bits (126), Expect = 7e-09
 Identities = 32/171 (18%), Positives = 62/171 (36%), Gaps = 14/171 (8%)

Query: 58  KLATNNYDQKNVITEDWGCILYKGFW------QERLISVMRFRESNRDGHGSCINN-IVY 110
           ++  +   ++ VI       +YKG        +E  +++   +    +            
Sbjct: 3   EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGI 62

Query: 111 AAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMD 170
             Q SH +I++L G   +    ++  E +E G L   +       +        + +   
Sbjct: 63  MGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSV----LQLVGMLRG 118

Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTS 221
           IA  + YL        V+RD    +IL N   V K+ DF LS  + +   +
Sbjct: 119 IAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA 166

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 51.7 bits (123), Expect = 1e-08
 Identities = 29/118 (24%), Positives = 53/118 (44%), Gaps = 12/118 (10%)

Query: 112 AQMSHDHILKLIGCCLET----PIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKI 167
           A ++H  I+ +           P+P +  E V+   LRD +         P+  K  +++
Sbjct: 62  AALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV-----HTEGPMTPKRAIEV 116

Query: 168 AMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKC 225
             D   AL + H      I++RD K A+I+ +  N  K+ DF ++ +I + G S  + 
Sbjct: 117 IADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 171

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.4 bits (122), Expect = 2e-08
 Identities = 22/153 (14%), Positives = 49/153 (32%), Gaps = 14/153 (9%)

Query: 79  YKGFWQE--RLISVMRFRESNRDGHG-SCINNIVYAAQMSHDHILKLIGCCLETPIPILA 135
              +       +++ +        +    +  I    +  H++I+ +        I  + 
Sbjct: 25  CSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMK 84

Query: 136 FESVE---YGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFK 192
              +     G    ++L     +T+ L   H       I   L Y+H      +++RD K
Sbjct: 85  DVYLVTHLMGADLYKLL-----KTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLK 136

Query: 193 TAHILFNEENVAKMFDFSLSISIPEGGTSGAKC 225
            +++L N     K+ DF L+             
Sbjct: 137 PSNLLLNTTCDLKICDFGLARVADPDHDHTGFL 169

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.4 bits (122), Expect = 2e-08
 Identities = 18/122 (14%), Positives = 44/122 (36%), Gaps = 4/122 (3%)

Query: 105 INNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLL-MKH 163
           +  + +     H ++++L   C  +        ++ + ++   + +      EP +  + 
Sbjct: 58  VAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTET 117

Query: 164 RLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGA 223
              +   +   L +LH      +V+RD K  +IL       K+ DF L+          +
Sbjct: 118 IKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTS 174

Query: 224 KC 225
             
Sbjct: 175 VV 176

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.3 bits (119), Expect = 5e-08
 Identities = 22/144 (15%), Positives = 48/144 (33%), Gaps = 6/144 (4%)

Query: 88  ISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEY---GNL 144
           +  +           + +  I     + H++++ LI  C     P    +   Y      
Sbjct: 40  LKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFC 99

Query: 145 RDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVA 204
              +            +    ++   + + L Y+H      I++RD K A++L   + V 
Sbjct: 100 EHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVL 156

Query: 205 KMFDFSLSISIPEGGTSGAKCLKS 228
           K+ DF L+ +      S      +
Sbjct: 157 KLADFGLARAFSLAKNSQPNRYTN 180

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.7 bits (118), Expect = 8e-08
 Identities = 15/116 (12%), Positives = 37/116 (31%), Gaps = 8/116 (6%)

Query: 107 NIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLK 166
            ++         +++L+         +L  E  E        ++      E    +    
Sbjct: 59  VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE----ELARS 114

Query: 167 IAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEEN-VAKMFDFSLSISIPEGGTS 221
               +  A+ + H      +++RD K  +IL +      K+ DF     + +   +
Sbjct: 115 FFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT 167

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.4 bits (117), Expect = 1e-07
 Identities = 21/138 (15%), Positives = 45/138 (32%), Gaps = 12/138 (8%)

Query: 88  ISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESV---EY-GN 143
           I  +     +          +     M H++++ L+             +      + G 
Sbjct: 48  IKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGT 107

Query: 144 LRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENV 203
              +++     + E L       +   +   L Y+H      I++RD K  ++  NE+  
Sbjct: 108 DLGKLM-----KHEKLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCE 159

Query: 204 AKMFDFSLSISIPEGGTS 221
            K+ DF L+       T 
Sbjct: 160 LKILDFGLARQADSEMTG 177

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 49.1 bits (116), Expect = 1e-07
 Identities = 21/120 (17%), Positives = 42/120 (35%), Gaps = 14/120 (11%)

Query: 109 VYAAQMSHDHILKLIGCCLE--TPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLK 166
           +        +I+ L     +  +  P L FE V   + +           + L       
Sbjct: 82  ILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY--------QTLTDYDIRF 133

Query: 167 IAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEEN-VAKMFDFSLSISIPEGGTSGAKC 225
              +I  AL Y H      I++RD K  +++ + E+   ++ D+ L+     G     + 
Sbjct: 134 YMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV 190

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 47.9 bits (113), Expect = 3e-07
 Identities = 19/108 (17%), Positives = 39/108 (36%), Gaps = 8/108 (7%)

Query: 105 INNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHR 164
           +N       ++   ++KL     +     +  E V  G +   +      +       H 
Sbjct: 89  LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-----RRIGRFSEPHA 143

Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
              A  I     YLH      ++YRD K  ++L +++   ++ DF  +
Sbjct: 144 RFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFA 188

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 46.0 bits (108), Expect = 1e-06
 Identities = 23/147 (15%), Positives = 44/147 (29%), Gaps = 10/147 (6%)

Query: 94  RESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQ 153
            E  +  H            M     +  I  C       +    +   +L D     S+
Sbjct: 39  LECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSR 98

Query: 154 PQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEE---NVAKMFDFS 210
             +     K  L +A  +   + Y+H    +  ++RD K  + L       N+  + DF 
Sbjct: 99  KFSL----KTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFG 151

Query: 211 LSISIPEGGTSGAKCLKSERTEICCVR 237
           L+    +  T      +  +      R
Sbjct: 152 LAKKYRDARTHQHIPYRENKNLTGTAR 178

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.6 bits (107), Expect = 2e-06
 Identities = 24/110 (21%), Positives = 35/110 (31%), Gaps = 8/110 (7%)

Query: 116 HDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHAL 175
              ++ L           L  + +  G L   +      Q E            +I  AL
Sbjct: 88  SPFLVTLHYAFQTETKLHLILDYINGGELFTHL-----SQRERFTEHEVQIYVGEIVLAL 142

Query: 176 AYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKC 225
            +LH      I+YRD K  +IL +      + DF LS       T  A  
Sbjct: 143 EHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYD 189

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 43.6 bits (102), Expect = 9e-06
 Identities = 17/122 (13%), Positives = 35/122 (28%), Gaps = 13/122 (10%)

Query: 115 SHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHA 174
               I  +     E    +L  + +         L           +K     A  +   
Sbjct: 59  GCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDL-----CGRKFSVKTVAMAAKQMLAR 113

Query: 175 LAYLHFGFPRPIVYRDFKTAHILFNE-----ENVAKMFDFSLSISIPEGGTSGAKCLKSE 229
           +  +H    + +VYRD K  + L         N+  + DF +     +  T      + +
Sbjct: 114 VQSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREK 170

Query: 230 RT 231
           + 
Sbjct: 171 KN 172

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.2 bits (95), Expect = 5e-05
 Identities = 15/96 (15%), Positives = 35/96 (36%), Gaps = 2/96 (2%)

Query: 107 NIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLK 166
           +      M  +HILKL+          +    V      + +    + +   + + +  +
Sbjct: 70  DNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQ 129

Query: 167 IAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEEN 202
           I+  +   L Y+H      I++ D K  ++L    +
Sbjct: 130 ISKQLLLGLDYMHRR--CGIIHTDIKPENVLMEIVD 163

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 39.4 bits (91), Expect = 1e-04
 Identities = 18/137 (13%), Positives = 46/137 (33%), Gaps = 23/137 (16%)

Query: 79  YKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES 138
           +K   ++R    + F         +    +    ++    + K+           +  E 
Sbjct: 39  FKKVKEKRDYGDLHFSVLAIRSARNEFRALQ---KLQGLAVPKVYAWEG----NAVLMEL 91

Query: 139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILF 198
           ++   L                +++  ++   I   +A  +    R IV+ D    ++L 
Sbjct: 92  IDAKELYRVR------------VENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVLV 136

Query: 199 NEENVAKMFDFSLSISI 215
           +EE +  + DF  S+ +
Sbjct: 137 SEEGI-WIIDFPQSVEV 152

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	241
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.98
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.98
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.98
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.98
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.97
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.97
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.97
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.97
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.97
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.93
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.92
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	99.04
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	98.35
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	98.22
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	97.39
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	97.27
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	96.75

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-39  Score=267.74  Aligned_cols=165  Identities=16%  Similarity=0.232  Sum_probs=146.6

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeC
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESV  139 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  139 (241)
                      +.|...+.||+|+||.||+|.+  ++..||||++........+.+.+|+.+++.++||||+++++++.+++..|+||||+
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~   99 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   99 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEec
Confidence            4689999999999999999998  79999999998766556678999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCC
Q 026214          140 EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGG  219 (241)
Q Consensus       140 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~  219 (241)
                      ++|+|.+++...      .+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+|+.+..+.
T Consensus       100 ~gg~L~~~~~~~------~l~~~~~~~i~~qi~~aL~yLH---~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~  170 (293)
T d1yhwa1         100 AGGSLTDVVTET------CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ  170 (293)
T ss_dssp             TTCBHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred             CCCcHHHHhhcc------CCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCcHHHeEECCCCcEeeccchhheeecccc
Confidence            999999988543      4899999999999999999999   9999999999999999999999999999999886654


Q ss_pred             ccccceeecCCceeeeecC
Q 026214          220 TSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~e  238 (241)
                      ....   ...++..|+|||
T Consensus       171 ~~~~---~~~gt~~Y~aPE  186 (293)
T d1yhwa1         171 SKRS---TMVGTPYWMAPE  186 (293)
T ss_dssp             CCBC---CCCSCGGGCCHH
T ss_pred             cccc---ccccCCCccChh
Confidence            3322   223556788988

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=3.1e-40  Score=272.99  Aligned_cols=174  Identities=20%  Similarity=0.311  Sum_probs=150.1

Q ss_pred             HHHHHhcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcce
Q 026214           56 ELKLATNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPI  133 (241)
Q Consensus        56 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  133 (241)
                      +|+...++|...+.||+|+||.||+|.+  +++.||||+++... ...++|.+|+.++++++|||||++++++.+++..+
T Consensus        11 ~wei~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~   89 (287)
T d1opja_          11 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY   89 (287)
T ss_dssp             TTBCCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             ccEecHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc-chHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeE
Confidence            3444556788889999999999999999  78999999987654 45678999999999999999999999999999999


Q ss_pred             EEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCce
Q 026214          134 LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSI  213 (241)
Q Consensus       134 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~  213 (241)
                      ++|||+++|+|.+++...   ....+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+|+
T Consensus        90 iv~E~~~~g~l~~~l~~~---~~~~~~~~~~~~i~~qi~~gL~yLH---~~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~  163 (287)
T d1opja_          90 IITEFMTYGNLLDYLREC---NRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSR  163 (287)
T ss_dssp             EEEECCTTCBHHHHHHHS---CTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCCTT
T ss_pred             EEeecccCcchHHHhhhc---cccchHHHHHHHHHHHHHHHHHHHH---HCCcccCccccCeEEECCCCcEEEcccccee
Confidence            999999999999999765   3567999999999999999999999   9999999999999999999999999999999


Q ss_pred             ecCCCCccccceeecCCceeeeecC
Q 026214          214 SIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .+..+.........  ++..|+|||
T Consensus       164 ~~~~~~~~~~~~~~--g~~~y~aPE  186 (287)
T d1opja_         164 LMTGDTYTAHAGAK--FPIKWTAPE  186 (287)
T ss_dssp             TCCSSSSEEETTEE--ECGGGCCHH
T ss_pred             ecCCCCceeecccc--ccccccChH
Confidence            87665443332222  333578887

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-39  Score=265.26  Aligned_cols=168  Identities=20%  Similarity=0.199  Sum_probs=143.0

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC-cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR-DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      ++|...+.||+|+||.||+|.+  +++.||||++..... ...+.+.+|+.++++++||||+++++++.+++..|+||||
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy   84 (271)
T d1nvra_           5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   84 (271)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEec
Confidence            4688889999999999999998  789999999876432 3346799999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      +++|+|.+++..     ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+|+.+..+
T Consensus        85 ~~gg~L~~~l~~-----~~~l~e~~~~~i~~qi~~al~ylH---~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~  156 (271)
T d1nvra_          85 CSGGELFDRIEP-----DIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN  156 (271)
T ss_dssp             CTTEEGGGGSBT-----TTBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECEET
T ss_pred             cCCCcHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHH---HcCCccCcccHHHEEECCCCCEEEccchhheeeccC
Confidence            999999999844     356999999999999999999999   999999999999999999999999999999987654


Q ss_pred             CccccceeecCCceeeeecC
Q 026214          219 GTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ..... .....+|..|+|||
T Consensus       157 ~~~~~-~~~~~GT~~Y~APE  175 (271)
T d1nvra_         157 NRERL-LNKMCGTLPYVAPE  175 (271)
T ss_dssp             TEECC-BCCCCSCGGGSCTH
T ss_pred             Ccccc-ccceeeCcCccCHh
Confidence            33211 11234566789998

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-39  Score=267.64  Aligned_cols=167  Identities=19%  Similarity=0.186  Sum_probs=146.4

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeC
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESV  139 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  139 (241)
                      +.|...+.||+|+||.||+|.+  ++..||+|++........+.+.+|+.++++++|||||++++++.+++..++||||+
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~   91 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC   91 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecC
Confidence            4578889999999999999998  78999999998776667788999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCC
Q 026214          140 EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGG  219 (241)
Q Consensus       140 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~  219 (241)
                      ++|+|.+++...    ..++++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+|+......
T Consensus        92 ~~g~L~~~~~~~----~~~l~e~~~~~i~~qi~~gL~ylH---~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~  164 (288)
T d2jfla1          92 AGGAVDAVMLEL----ERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI  164 (288)
T ss_dssp             TTEEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECHHHH
T ss_pred             CCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCEEEeecChhheeECCCCCEEEEechhhhccCCCc
Confidence            999999998664    346999999999999999999999   9999999999999999999999999999998764432


Q ss_pred             ccccceeecCCceeeeecC
Q 026214          220 TSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~e  238 (241)
                      ....   ...++..|+|||
T Consensus       165 ~~~~---~~~Gt~~y~APE  180 (288)
T d2jfla1         165 QRRD---SFIGTPYWMAPE  180 (288)
T ss_dssp             HHHT---CCCSCCTTCCHH
T ss_pred             cccc---ccccccccCCHH
Confidence            2111   223455688887

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-38  Score=260.69  Aligned_cols=167  Identities=20%  Similarity=0.327  Sum_probs=136.3

Q ss_pred             cCCCcCCeeecccceEEEEEEE-CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCC
Q 026214           62 NNYDQKNVITEDWGCILYKGFW-QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVE  140 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~  140 (241)
                      ++|...+.||+|+||.||+|.+ ++..||||++.... ...+.|.+|+.++++++||||++++|++.+++..++||||++
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~   83 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME   83 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred             HHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCc-CcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecC
Confidence            4677889999999999999999 78899999997654 455789999999999999999999999999999999999999


Q ss_pred             CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCc
Q 026214          141 YGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGT  220 (241)
Q Consensus       141 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~  220 (241)
                      +|+|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+|+.+.....
T Consensus        84 ~g~L~~~l~~~----~~~~~~~~~~~i~~qia~gl~~lH---~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~  156 (263)
T d1sm2a_          84 HGCLSDYLRTQ----RGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY  156 (263)
T ss_dssp             TCBHHHHHHTT----TTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCTTCSGGGEEECGGGCEEECSCC----------
T ss_pred             CCcHHHHhhcc----ccCCCHHHHHHHHHHHHHHHHhhh---ccceeecccchhheeecCCCCeEecccchheeccCCCc
Confidence            99999998665    456899999999999999999999   99999999999999999999999999999998766544


Q ss_pred             cccceeecCCceeeeecC
Q 026214          221 SGAKCLKSERTEICCVRE  238 (241)
Q Consensus       221 ~~~~~~~~~~~~~~~~~e  238 (241)
                      .....  ..++..|+|||
T Consensus       157 ~~~~~--~~gt~~y~aPE  172 (263)
T d1sm2a_         157 TSSTG--TKFPVKWASPE  172 (263)
T ss_dssp             ----------CTTSCCHH
T ss_pred             eeecc--eecCcccCChH
Confidence            33322  23445688887

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.5e-39  Score=264.03  Aligned_cols=173  Identities=17%  Similarity=0.259  Sum_probs=145.7

Q ss_pred             HHHHHhcCCCcCCeeecccceEEEEEEE-CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceE
Q 026214           56 ELKLATNNYDQKNVITEDWGCILYKGFW-QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPIL  134 (241)
Q Consensus        56 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  134 (241)
                      ++....++|...+.||+|+||.||+|.+ ++..||||++.... ...+.|.+|+.++++++|||||+++|++.+ +..++
T Consensus         7 ~wei~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~i   84 (272)
T d1qpca_           7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYI   84 (272)
T ss_dssp             TTBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred             CeecCHHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCc-CCHHHHHHHHHHHHhCCCCCEeEEEeeecc-CCeEE
Confidence            3344556788889999999999999999 77899999997654 455789999999999999999999998754 56799


Q ss_pred             EEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCcee
Q 026214          135 AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSIS  214 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~  214 (241)
                      ||||+++|+|.+++...   ....+++..++.++.||+.||.|||   +.+|+||||||+||||+.++.+||+|||+|+.
T Consensus        85 v~Ey~~~g~L~~~~~~~---~~~~l~~~~~~~i~~qi~~gl~~lH---~~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~  158 (272)
T d1qpca_          85 ITEYMENGSLVDFLKTP---SGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARL  158 (272)
T ss_dssp             EEECCTTCBHHHHTTSH---HHHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             EEEeCCCCcHHHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccchhheeeecccceeeccccceEE
Confidence            99999999999988554   2345899999999999999999999   99999999999999999999999999999998


Q ss_pred             cCCCCccccceeecCCceeeeecC
Q 026214          215 IPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +..........  ..++..|+|||
T Consensus       159 ~~~~~~~~~~~--~~gt~~y~APE  180 (272)
T d1qpca_         159 IEDNEYTAREG--AKFPIKWTAPE  180 (272)
T ss_dssp             CSSSCEECCTT--CCCCTTTSCHH
T ss_pred             ccCCccccccc--cCCcccccChH
Confidence            87654333222  23344688887

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=6.3e-39  Score=266.56  Aligned_cols=169  Identities=17%  Similarity=0.210  Sum_probs=130.7

Q ss_pred             CCCcCCeeecccceEEEEEEE--CC---eEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QE---RLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      +|...++||+|+||.||+|.+  ++   ..||||.+.... ....+.|.+|+.++++++|||||+++|++..++..++||
T Consensus        27 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv~  106 (299)
T d1jpaa_          27 CVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIIT  106 (299)
T ss_dssp             GEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             hcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEE
Confidence            455568999999999999998  33   358999886543 233467999999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||+++|+|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+||||+.++.+||+|||+|+.+.
T Consensus       107 Ey~~~g~L~~~~~~~----~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~  179 (299)
T d1jpaa_         107 EFMENGSLDSFLRQN----DGQFTVIQLVGMLRGIAAGMKYLA---DMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLE  179 (299)
T ss_dssp             ECCTTEEHHHHHHTT----TTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred             EecCCCcceeeeccc----cCCCCHHHHHHHHHHHHHHHHHHh---hCCCccCccccceEEECCCCcEEECCcccceEcc
Confidence            999999999988764    446999999999999999999999   9999999999999999999999999999999887


Q ss_pred             CCCcccc--ceeecCCceeeeecC
Q 026214          217 EGGTSGA--KCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~--~~~~~~~~~~~~~~e  238 (241)
                      .+.....  ......++..|+|||
T Consensus       180 ~~~~~~~~~~~~~~~~t~~y~aPE  203 (299)
T d1jpaa_         180 DDTSDPTYTSALGGKIPIRWTAPE  203 (299)
T ss_dssp             ----------------CGGGSCHH
T ss_pred             CCCCcceeeecccccCCccccCHH
Confidence            6544322  223344566789998

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.8e-38  Score=260.03  Aligned_cols=169  Identities=15%  Similarity=0.228  Sum_probs=144.2

Q ss_pred             cCCCcCC-eeecccceEEEEEEE----CCeEEEEEEeeccCC-cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEE
Q 026214           62 NNYDQKN-VITEDWGCILYKGFW----QERLISVMRFRESNR-DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA  135 (241)
Q Consensus        62 ~~~~~~~-~lg~G~~g~Vy~~~~----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  135 (241)
                      ++|...+ +||+|+||.||+|.+    ++..||||.++.... ...+.|.+|+.++++++|||||+++|++.+ +..++|
T Consensus         8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lv   86 (285)
T d1u59a_           8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLV   86 (285)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEE
T ss_pred             cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEE
Confidence            3455555 599999999999987    456799999976532 345779999999999999999999999865 568999


Q ss_pred             EeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceec
Q 026214          136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI  215 (241)
Q Consensus       136 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~  215 (241)
                      |||+++|+|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+|+.+
T Consensus        87 mE~~~~g~L~~~l~~~----~~~l~~~~~~~i~~qi~~gL~ylH---~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~  159 (285)
T d1u59a_          87 MEMAGGGPLHKFLVGK----REEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKAL  159 (285)
T ss_dssp             EECCTTEEHHHHHTTC----TTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred             EEeCCCCcHHHHhhcc----ccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCcCchhheeeccCCceeeccchhhhcc
Confidence            9999999999998554    456999999999999999999999   999999999999999999999999999999998


Q ss_pred             CCCCccccceeecCCceeeeecC
Q 026214          216 PEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ..............++..|+|||
T Consensus       160 ~~~~~~~~~~~~~~gt~~y~aPE  182 (285)
T d1u59a_         160 GADDSYYTARSAGKWPLKWYAPE  182 (285)
T ss_dssp             TTCSCEECCCCSSCCCGGGCCHH
T ss_pred             cccccccccccccccCccccChH
Confidence            87665555555556677789998

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-38  Score=262.44  Aligned_cols=170  Identities=19%  Similarity=0.242  Sum_probs=138.2

Q ss_pred             HHhcCCCcCCeeecccceEEEEEEECCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           59 LATNNYDQKNVITEDWGCILYKGFWQERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        59 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      ...++|...+.||+|+||.||+|.+.+ .||||+++...  ....+.|.+|+.++++++|||||++++++.. +..++||
T Consensus         5 i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~lv~   82 (276)
T d1uwha_           5 IPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAIVT   82 (276)
T ss_dssp             CCTTCCCCCSEEEECSSCEEEEEESSS-EEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred             cccccEEEEEEEeeCCCcEEEEEEECC-EEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cEEEEEE
Confidence            345778999999999999999998754 59999987542  3345789999999999999999999998754 5689999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||+++|+|.+++...    ...+++..+..++.|++.||.|||   +.+||||||||+|||++.++.+||+|||+|+...
T Consensus        83 Ey~~~g~L~~~l~~~----~~~~~~~~~~~i~~qi~~gl~yLH---~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~  155 (276)
T d1uwha_          83 QWCEGSSLYHHLHII----ETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKS  155 (276)
T ss_dssp             ECCCEEEHHHHHHTS----CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTSSEEECCCCCSCC--
T ss_pred             ecCCCCCHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHh---cCCEeccccCHHHEEEcCCCCEEEccccceeecc
Confidence            999999999999765    346999999999999999999999   9999999999999999999999999999998775


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ....... .....++..|+|||
T Consensus       156 ~~~~~~~-~~~~~gt~~y~APE  176 (276)
T d1uwha_         156 RWSGSHQ-FEQLSGSILWMAPE  176 (276)
T ss_dssp             -----------CCCCGGGCCHH
T ss_pred             ccCCccc-ccccccCcccCCHH
Confidence            4432211 11223456788988

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-38  Score=257.59  Aligned_cols=164  Identities=15%  Similarity=0.211  Sum_probs=144.2

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeecc---CCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRES---NRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      ++|...+.||+|+||.||+|.+  ++..||+|.+...   .......+.+|+.+++.++||||+++++++.+++..++||
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm   85 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL   85 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEE
Confidence            4588889999999999999999  7899999998753   2234567899999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||+++|+|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+|...+
T Consensus        86 Ey~~~g~L~~~l~~~-----~~l~e~~~~~i~~qi~~al~~lH---~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~  157 (263)
T d2j4za1          86 EYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP  157 (263)
T ss_dssp             ECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCSCSCCC
T ss_pred             eecCCCcHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeeeeccccceecCCCCEeecccceeeecC
Confidence            999999999999764     35999999999999999999999   9999999999999999999999999999998766


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .+...     ...++..|+|||
T Consensus       158 ~~~~~-----~~~Gt~~Y~APE  174 (263)
T d2j4za1         158 SSRRT-----TLCGTLDYLPPE  174 (263)
T ss_dssp             CCCCE-----ETTEEGGGCCHH
T ss_pred             CCccc-----ccCCCCcccCHH
Confidence            54322     234566788988

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=1.1e-37  Score=264.11  Aligned_cols=166  Identities=13%  Similarity=0.186  Sum_probs=146.7

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeC
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESV  139 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  139 (241)
                      ++|...+.||+|+||.||+|.+  ++..||||++........+.+.+|+.++++++|||||++++++.+++..++||||+
T Consensus        26 ~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~  105 (350)
T d1koaa2          26 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM  105 (350)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence            5788999999999999999998  79999999998765555677899999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEc--CCCcEEEccccCceecCC
Q 026214          140 EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFN--EENVAKMFDFSLSISIPE  217 (241)
Q Consensus       140 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~--~~~~~ki~DfG~a~~~~~  217 (241)
                      ++|+|.+++...    ...+++..+..++.||+.||.|||   +.+|+||||||+|||++  .++.+||+|||+|+.+..
T Consensus       106 ~gg~L~~~l~~~----~~~l~e~~~~~i~~qi~~aL~ylH---~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~  178 (350)
T d1koaa2         106 SGGELFEKVADE----HNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP  178 (350)
T ss_dssp             CSCBHHHHHTCT----TSCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCT
T ss_pred             CCCCHHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHH---hcCCeeeeechhHeeeccCCCCeEEEeecchheeccc
Confidence            999999999554    346999999999999999999999   99999999999999995  467899999999998876


Q ss_pred             CCccccceeecCCceeeeecC
Q 026214          218 GGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .....    ...++..|+|||
T Consensus       179 ~~~~~----~~~gT~~Y~aPE  195 (350)
T d1koaa2         179 KQSVK----VTTGTAEFAAPE  195 (350)
T ss_dssp             TSCEE----EECSCTTTCCHH
T ss_pred             ccccc----eecCcccccCHH
Confidence            54332    334566789998

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-38  Score=266.99  Aligned_cols=165  Identities=16%  Similarity=0.202  Sum_probs=143.5

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC-CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEe
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN-RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFE  137 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  137 (241)
                      .++|...++||+|+||+||+|.+  ++..||+|.++... ......+.+|+.+++.++|||||+++++|.+.+..++|||
T Consensus         5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmE   84 (322)
T d1s9ja_           5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   84 (322)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             ccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence            46788899999999999999998  79999999997653 2334678999999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCC-CeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPR-PIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~-~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      |+++|+|.+++.+.     ..+++..+..++.|++.||.|||   +. +|+||||||+|||++.++.+||+|||+|+.+.
T Consensus        85 y~~gg~L~~~l~~~-----~~l~~~~~~~~~~qil~aL~yLH---~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~  156 (322)
T d1s9ja_          85 HMDGGSLDQVLKKA-----GRIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI  156 (322)
T ss_dssp             CCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHH
T ss_pred             cCCCCcHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHH---HhCCEEccccCHHHeeECCCCCEEEeeCCCccccC
Confidence            99999999999765     34899999999999999999999   74 89999999999999999999999999999765


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .....     ...++..|+|||
T Consensus       157 ~~~~~-----~~~GT~~Y~APE  173 (322)
T d1s9ja_         157 DSMAN-----SFVGTRSYMSPE  173 (322)
T ss_dssp             HHTC--------CCSSCCCCHH
T ss_pred             CCccc-----cccCCccccCch
Confidence            43221     124566789998

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.9e-38  Score=257.68  Aligned_cols=170  Identities=19%  Similarity=0.203  Sum_probs=135.9

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CC----eEEEEEEeeccCC-cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QE----RLISVMRFRESNR-DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPIL  134 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~----~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  134 (241)
                      ..|...++||+|+||.||+|.+  ++    ..||||++..... .....|.+|+.++++++|||||+++|++.+.+..++
T Consensus         7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~   86 (283)
T d1mqba_           7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI   86 (283)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEE
Confidence            4577889999999999999988  22    4799999876432 234568999999999999999999999999999999


Q ss_pred             EEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCcee
Q 026214          135 AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSIS  214 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~  214 (241)
                      +|||+.++++.+.+...    ...+++..+..++.|++.||.|||   +.+|+||||||+||||+.++.+||+|||+|+.
T Consensus        87 v~e~~~~~~l~~~~~~~----~~~~~~~~~~~i~~~i~~gl~~lH---~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~  159 (283)
T d1mqba_          87 ITEYMENGALDKFLREK----DGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRV  159 (283)
T ss_dssp             EEECCTTEEHHHHHHHT----TTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred             EEEecccCcchhhhhcc----cccccHHHHHHHHHHHHHhhhhcc---ccccccCccccceEEECCCCeEEEcccchhhc
Confidence            99999999999988765    456999999999999999999999   99999999999999999999999999999998


Q ss_pred             cCCCCccccceeecCCceeeeecC
Q 026214          215 IPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +..+...........++..|+|||
T Consensus       160 ~~~~~~~~~~~~~~~gt~~Y~APE  183 (283)
T d1mqba_         160 LEDDPEATYTTSGGKIPIRWTAPE  183 (283)
T ss_dssp             --------------CCCGGGSCHH
T ss_pred             ccCCCccceEeccCCCCccccCHH
Confidence            876554443344445566789998

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=1.4e-37  Score=263.67  Aligned_cols=166  Identities=17%  Similarity=0.177  Sum_probs=145.6

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeC
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESV  139 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  139 (241)
                      +.|...+.||+|+||.||+|.+  ++..||||++..........+.+|+.++++++|||||++++++.+++..|+||||+
T Consensus        29 d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~  108 (352)
T d1koba_          29 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL  108 (352)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence            5688999999999999999998  89999999998765445567889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEc--CCCcEEEccccCceecCC
Q 026214          140 EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFN--EENVAKMFDFSLSISIPE  217 (241)
Q Consensus       140 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~--~~~~~ki~DfG~a~~~~~  217 (241)
                      ++|+|.+.+...    ...+++..+..++.||+.||.|||   +.+|+||||||+||||+  .++.+||+|||+|+.+..
T Consensus       109 ~gg~L~~~~~~~----~~~l~e~~~~~i~~qi~~aL~ylH---~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~  181 (352)
T d1koba_         109 SGGELFDRIAAE----DYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP  181 (352)
T ss_dssp             CCCBHHHHTTCT----TCCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCT
T ss_pred             CCChHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccccccccccccCCCeEEEeecccceecCC
Confidence            999999988544    446999999999999999999999   99999999999999997  578999999999999876


Q ss_pred             CCccccceeecCCceeeeecC
Q 026214          218 GGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +....    ...++..|+|||
T Consensus       182 ~~~~~----~~~gt~~y~aPE  198 (352)
T d1koba_         182 DEIVK----VTTATAEFAAPE  198 (352)
T ss_dssp             TSCEE----EECSSGGGCCHH
T ss_pred             CCcee----eccCcccccCHH
Confidence            54332    233455678887

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-37  Score=255.44  Aligned_cols=162  Identities=17%  Similarity=0.236  Sum_probs=136.7

Q ss_pred             CeeecccceEEEEEEE----CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeCCC
Q 026214           68 NVITEDWGCILYKGFW----QERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEY  141 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~----~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~  141 (241)
                      ++||+|+||.||+|.+    +++.||||+++...  ....+.|.+|+.++++++|||||++++++.. +..++||||+++
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~   91 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL   91 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCC
Confidence            5799999999999987    34789999987542  2234679999999999999999999999865 457899999999


Q ss_pred             CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCcc
Q 026214          142 GNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTS  221 (241)
Q Consensus       142 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~  221 (241)
                      |+|.+++...     ..+++..++.++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+|+.+......
T Consensus        92 g~L~~~l~~~-----~~l~~~~~~~i~~qi~~gl~ylH---~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~  163 (277)
T d1xbba_          92 GPLNKYLQQN-----RHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY  163 (277)
T ss_dssp             EEHHHHHHHC-----TTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSE
T ss_pred             CcHHHHHhhc-----cCCCHHHHHHHHHHHHHHHhhHH---hCCcccCCCcchhhcccccCcccccchhhhhhccccccc
Confidence            9999999664     45999999999999999999999   999999999999999999999999999999998777665


Q ss_pred             ccceeecCCceeeeecC
Q 026214          222 GAKCLKSERTEICCVRE  238 (241)
Q Consensus       222 ~~~~~~~~~~~~~~~~e  238 (241)
                      ........++..|+|||
T Consensus       164 ~~~~~~~~gt~~y~APE  180 (277)
T d1xbba_         164 YKAQTHGKWPVKWYAPE  180 (277)
T ss_dssp             EEC----CCCGGGCCHH
T ss_pred             cccccccCCCceecCch
Confidence            55555555666789998

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-37  Score=251.09  Aligned_cols=168  Identities=17%  Similarity=0.278  Sum_probs=146.7

Q ss_pred             hcCCCcCCeeecccceEEEEEEE-CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeC
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW-QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESV  139 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  139 (241)
                      .++|...++||+|+||+||+|.+ ++..||||.++... ...+.|.+|+.++++++||||++++|++.+++..++||||+
T Consensus         3 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~-~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~   81 (258)
T d1k2pa_           3 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM   81 (258)
T ss_dssp             CCCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSS-SCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECC
T ss_pred             hHHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCc-CCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEcc
Confidence            36788899999999999999999 78899999998754 35678999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCC
Q 026214          140 EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGG  219 (241)
Q Consensus       140 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~  219 (241)
                      ++|+|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+|+.+....
T Consensus        82 ~~g~l~~~~~~~----~~~~~~~~~~~i~~qi~~gl~~LH---~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~  154 (258)
T d1k2pa_          82 ANGCLLNYLREM----RHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE  154 (258)
T ss_dssp             TTEEHHHHHHSG----GGCCCHHHHHHHHHHHHHHHHHHH---HTTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSS
T ss_pred             CCCcHHHhhhcc----ccCCcHHHHHHHHHHHHHHHHHHh---hcCcccccccceeEEEcCCCcEEECcchhheeccCCC
Confidence            999999998665    456899999999999999999999   9999999999999999999999999999998776554


Q ss_pred             ccccceeecCCceeeeecC
Q 026214          220 TSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~e  238 (241)
                      ....  ....++..|+|||
T Consensus       155 ~~~~--~~~~~t~~y~aPE  171 (258)
T d1k2pa_         155 YTSS--VGSKFPVRWSPPE  171 (258)
T ss_dssp             CCCC--CCSCCCGGGCCHH
T ss_pred             ceee--cccCCCCCcCCcH
Confidence            3322  2233445678887

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-37  Score=257.19  Aligned_cols=168  Identities=15%  Similarity=0.148  Sum_probs=142.6

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeecc---CCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRES---NRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      ++|...+.||+|+||.||+|.+  ++..||||++...   .....+.+.+|+.++++++||||+++++++.+++..|+||
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm   87 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL   87 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence            4588899999999999999998  7899999998753   2234567899999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||+++|+|.+++...     +.+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+|+.+.
T Consensus        88 Ey~~gg~L~~~~~~~-----~~l~e~~~~~~~~qi~~al~ylH---~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~  159 (288)
T d1uu3a_          88 SYAKNGELLKYIRKI-----GSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS  159 (288)
T ss_dssp             CCCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             EccCCCCHHHhhhcc-----CCCCHHHHHHHHHHHHHHHHhhc---cccEEcCcCCccccccCCCceEEecccccceecc
Confidence            999999999998664     45999999999999999999999   9999999999999999999999999999999886


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ........ ....++..|+|||
T Consensus       160 ~~~~~~~~-~~~~GT~~Y~APE  180 (288)
T d1uu3a_         160 PESKQARA-NSFVGTAQYVSPE  180 (288)
T ss_dssp             -----------CCCCGGGCCHH
T ss_pred             cCCccccc-ccccCCccccCce
Confidence            54332211 1223566788998

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.5e-37  Score=259.27  Aligned_cols=161  Identities=17%  Similarity=0.229  Sum_probs=140.6

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCc---chhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEe
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRD---GHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFE  137 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  137 (241)
                      .|...+.||+|+||.||+|.+  ++..||||.+......   ..+.+.+|+.++++++|||||++++++.+++..++|||
T Consensus        16 ~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E   95 (309)
T d1u5ra_          16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME   95 (309)
T ss_dssp             HEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEE
Confidence            388889999999999999998  8899999999765432   23568999999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCC
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE  217 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~  217 (241)
                      ||.+|+|..++...     .++++..+..++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+|.....
T Consensus        96 ~~~~g~l~~~~~~~-----~~l~e~~~~~i~~qi~~aL~yLH---~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~  167 (309)
T d1u5ra_          96 YCLGSASDLLEVHK-----KPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP  167 (309)
T ss_dssp             CCSEEHHHHHHHHT-----SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred             ecCCCchHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEECCCCCEEEeecccccccCC
Confidence            99998887666443     46999999999999999999999   99999999999999999999999999999987654


Q ss_pred             CCccccceeecCCceeeeecC
Q 026214          218 GGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ..+       ..++..|+|||
T Consensus       168 ~~~-------~~GT~~Y~APE  181 (309)
T d1u5ra_         168 ANS-------FVGTPYWMAPE  181 (309)
T ss_dssp             BCC-------CCSCGGGCCHH
T ss_pred             CCc-------cccCccccCHH
Confidence            322       23566788988

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-38  Score=259.37  Aligned_cols=173  Identities=14%  Similarity=0.157  Sum_probs=131.5

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC--cchhhHHHHHHHHHhcCCCceeeEeeEEec--CCcceEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR--DGHGSCINNIVYAAQMSHDHILKLIGCCLE--TPIPILA  135 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv  135 (241)
                      ++|...+.||+|+||.||+|.+  +++.||+|.+.....  ...+.+.+|+.++++++||||+++++++.+  ++..|+|
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~iv   83 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV   83 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEE
T ss_pred             hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEE
Confidence            4688889999999999999998  789999999876532  234668999999999999999999999865  4568999


Q ss_pred             EeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCC--CCCeEEccCCCCCeeEcCCCcEEEccccCce
Q 026214          136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGF--PRPIVYRDFKTAHILFNEENVAKMFDFSLSI  213 (241)
Q Consensus       136 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~--~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~  213 (241)
                      |||+++|+|.+++..... ....+++..+..++.|++.||.|||+..  ..+|+||||||+||||+.++.+||+|||+|+
T Consensus        84 mEy~~~g~L~~~i~~~~~-~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~  162 (269)
T d2java1          84 MEYCEGGDLASVITKGTK-ERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR  162 (269)
T ss_dssp             EECCTTEEHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHH
T ss_pred             EecCCCCcHHHHHHhccc-cCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeecccee
Confidence            999999999999865311 2456999999999999999999999311  1349999999999999999999999999999


Q ss_pred             ecCCCCccccceeecCCceeeeecC
Q 026214          214 SIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .+..+.....   ...++..|+|||
T Consensus       163 ~~~~~~~~~~---~~~gt~~Y~APE  184 (269)
T d2java1         163 ILNHDTSFAK---AFVGTPYYMSPE  184 (269)
T ss_dssp             HC--------------CCCSCCCHH
T ss_pred             ecccCCCccc---cCCCCcccCCHH
Confidence            8866543322   223455689998

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.8e-37  Score=259.49  Aligned_cols=166  Identities=17%  Similarity=0.170  Sum_probs=145.6

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeecc---CCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRES---NRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      ++|...+.||+|+||.||+|.+  ++..||+|++.+.   .......+.+|+.+++.++||||+++++++.+.+..++||
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~   84 (337)
T d1o6la_           5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM   84 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccce
Confidence            5688899999999999999998  8999999999753   2234577899999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||+++|+|.+++...     ..+++..+..++.|++.||.|||   +++|+||||||+|||++.+|.+||+|||+|+.+.
T Consensus        85 ey~~gg~L~~~~~~~-----~~~~e~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~  156 (337)
T d1o6la_          85 EYANGGELFFHLSRE-----RVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI  156 (337)
T ss_dssp             ECCTTCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred             eccCCCchhhhhhcc-----cCCcHHHHHHHHHHHhhhhhhhh---hcCccccccCHHHeEecCCCCEEEeecccccccc
Confidence            999999999999765     35899999999999999999999   9999999999999999999999999999999776


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .......   ...++..|+|||
T Consensus       157 ~~~~~~~---~~~GT~~Y~aPE  175 (337)
T d1o6la_         157 SDGATMK---TFCGTPEYLAPE  175 (337)
T ss_dssp             CTTCCBC---CCEECGGGCCGG
T ss_pred             cCCcccc---cceeCHHHhhhh
Confidence            5443322   223466788998

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.9e-37  Score=250.26  Aligned_cols=161  Identities=16%  Similarity=0.162  Sum_probs=136.0

Q ss_pred             CcCCeeecccceEEEEEEE--CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEec----CCcceEEE
Q 026214           65 DQKNVITEDWGCILYKGFW--QERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLE----TPIPILAF  136 (241)
Q Consensus        65 ~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv~  136 (241)
                      ...++||+|+||+||+|.+  ++..||+|.+....  ....+.+.+|+.++++++|||||++++++.+    ....++||
T Consensus        12 ~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivm   91 (270)
T d1t4ha_          12 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT   91 (270)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEE
Confidence            4567899999999999999  78899999987643  2234678999999999999999999999865    34579999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCC--eEEccCCCCCeeEc-CCCcEEEccccCce
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRP--IVYRDFKTAHILFN-EENVAKMFDFSLSI  213 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~--ivH~dlk~~Nill~-~~~~~ki~DfG~a~  213 (241)
                      ||+++|+|.+++...     ..+++..+..++.|++.||.|||   +.+  |+||||||+|||++ +++.+||+|||+|+
T Consensus        92 E~~~~g~L~~~l~~~-----~~~~~~~~~~~~~qi~~gl~yLH---~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~  163 (270)
T d1t4ha_          92 ELMTSGTLKTYLKRF-----KVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT  163 (270)
T ss_dssp             ECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred             eCCCCCcHHHHHhcc-----ccccHHHHHHHHHHHHHHHHHHH---HCCCCEEeCCcChhhceeeCCCCCEEEeecCcce
Confidence            999999999999664     45899999999999999999999   777  99999999999996 57899999999998


Q ss_pred             ecCCCCccccceeecCCceeeeecC
Q 026214          214 SIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ........     ...++..|+|||
T Consensus       164 ~~~~~~~~-----~~~GT~~Y~aPE  183 (270)
T d1t4ha_         164 LKRASFAK-----AVIGTPEFMAPE  183 (270)
T ss_dssp             GCCTTSBE-----ESCSSCCCCCGG
T ss_pred             eccCCccC-----CcccCccccCHH
Confidence            65443221     223567789998

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7e-38  Score=258.38  Aligned_cols=170  Identities=17%  Similarity=0.243  Sum_probs=139.0

Q ss_pred             HHhcCCCcCCeeecccceEEEEEEE-CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEe
Q 026214           59 LATNNYDQKNVITEDWGCILYKGFW-QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFE  137 (241)
Q Consensus        59 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  137 (241)
                      ...++|...+.||+|+||.||+|.+ ++..||||++.... ...+.|.+|+.++++++|||||++++++.+ +..++|||
T Consensus        14 i~~~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~-~~~~lv~E   91 (285)
T d1fmka3          14 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE   91 (285)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred             cCHHHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECccc-CCHHHHHHHHHHHHhcccCCEeEEEEEEec-CCeEEEEE
Confidence            3446788899999999999999999 66789999997654 455789999999999999999999999854 56899999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCC
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE  217 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~  217 (241)
                      |+++|+|..++...   ....+++..++.++.||+.||.|||   +.+|+||||||+||||+.++.+||+|||+|+.+..
T Consensus        92 y~~~g~l~~~~~~~---~~~~l~~~~~~~i~~~i~~gl~~LH---~~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~  165 (285)
T d1fmka3          92 YMSKGSLLDFLKGE---TGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIED  165 (285)
T ss_dssp             CCTTCBHHHHHSHH---HHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC----
T ss_pred             ecCCCchhhhhhhc---ccccchHHHHHHHHHHHHHHHHHHh---hhheecccccceEEEECCCCcEEEcccchhhhccC
Confidence            99999999998765   2345999999999999999999999   99999999999999999999999999999998765


Q ss_pred             CCccccceeecCCceeeeecC
Q 026214          218 GGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ......  ....++..|+|||
T Consensus       166 ~~~~~~--~~~~gt~~y~aPE  184 (285)
T d1fmka3         166 NEYTAR--QGAKFPIKWTAPE  184 (285)
T ss_dssp             ------------CCGGGSCHH
T ss_pred             CCceee--ccccccccccChH
Confidence            543322  2334566788887

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.2e-37  Score=258.02  Aligned_cols=166  Identities=22%  Similarity=0.240  Sum_probs=129.0

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC-cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEe
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR-DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFE  137 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  137 (241)
                      .+.|...+.||+|+||.||+|.+  +++.||||.+..... .....+.+|+.+++.++||||+++++++.+++..|+|||
T Consensus         8 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE   87 (307)
T d1a06a_           8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQ   87 (307)
T ss_dssp             GGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence            35688899999999999999998  789999999976432 234568899999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEc---CCCcEEEccccCcee
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFN---EENVAKMFDFSLSIS  214 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~---~~~~~ki~DfG~a~~  214 (241)
                      |+++|+|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||+.   +++.+||+|||+|+.
T Consensus        88 ~~~gg~L~~~l~~~-----~~l~e~~~~~~~~qi~~al~ylH---~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~  159 (307)
T d1a06a_          88 LVSGGELFDRIVEK-----GFYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM  159 (307)
T ss_dssp             CCCSCBHHHHHHTC-----SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCC-----
T ss_pred             ccCCCcHHHhhhcc-----cCCCHHHHHHHHHHHHHHHHhhh---hceeeeEEecccceeecccCCCceEEEeccceeEE
Confidence            99999999999653     46999999999999999999999   99999999999999994   578999999999997


Q ss_pred             cCCCCccccceeecCCceeeeecC
Q 026214          215 IPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ...+....+    ..++..|+|||
T Consensus       160 ~~~~~~~~~----~~GT~~y~APE  179 (307)
T d1a06a_         160 EDPGSVLST----ACGTPGYVAPE  179 (307)
T ss_dssp             -----------------CTTSCHH
T ss_pred             ccCCCeeee----eeeCccccCcH
Confidence            765543322    23566788988

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.6e-36  Score=253.67  Aligned_cols=163  Identities=16%  Similarity=0.206  Sum_probs=143.3

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeecc---CCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRES---NRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      ++|...+.||+|+||.||+|.+  ++..||||++...   .....+.+.+|+.+++.++||||+++++++.+++..++||
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm   83 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   83 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence            4588889999999999999998  7999999999753   2234577899999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||+++|+|..++...     ..+++..+..++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+|+.+.
T Consensus        84 E~~~gg~l~~~~~~~-----~~~~~~~~~~~~~qi~~al~~lH---~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~  155 (316)
T d1fota_          84 DYIEGGELFSLLRKS-----QRFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVP  155 (316)
T ss_dssp             CCCCSCBHHHHHHHT-----SSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEECS
T ss_pred             eecCCcccccccccc-----ccccccHHHHHHHHHHHhhhhhc---cCcEEccccCchheeEcCCCCEEEecCccceEec
Confidence            999999999999665     45788899999999999999999   9999999999999999999999999999999876


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .....      ..++..|+|||
T Consensus       156 ~~~~~------~~Gt~~Y~APE  171 (316)
T d1fota_         156 DVTYT------LCGTPDYIAPE  171 (316)
T ss_dssp             SCBCC------CCSCTTTCCHH
T ss_pred             ccccc------ccCcccccCHH
Confidence            54322      23455688887

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-36  Score=249.29  Aligned_cols=165  Identities=19%  Similarity=0.180  Sum_probs=143.2

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC------cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcce
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR------DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPI  133 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  133 (241)
                      +.|...+.||+|+||.||+|.+  ++..||||++.....      ...+.+.+|+.++++++|||||++++++.+.+..+
T Consensus        10 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~   89 (293)
T d1jksa_          10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   89 (293)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence            5688899999999999999998  789999999875421      12467899999999999999999999999999999


Q ss_pred             EEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCC----cEEEccc
Q 026214          134 LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEEN----VAKMFDF  209 (241)
Q Consensus       134 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~----~~ki~Df  209 (241)
                      +||||+++|+|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++    .+|++||
T Consensus        90 iv~E~~~gg~L~~~i~~~-----~~l~~~~~~~~~~qi~~al~yLH---~~~ivHrDiKp~Nill~~~~~~~~~vkl~Df  161 (293)
T d1jksa_          90 LILELVAGGELFDFLAEK-----ESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDF  161 (293)
T ss_dssp             EEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCSSSSSCCEEECCC
T ss_pred             EEEEcCCCccccchhccc-----cccchhHHHHHHHHHHHHHHhhh---hcceeecccccceEEEecCCCcccceEecch
Confidence            999999999999999765     35999999999999999999999   99999999999999998766    5999999


Q ss_pred             cCceecCCCCccccceeecCCceeeeecC
Q 026214          210 SLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       210 G~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |+|..+..+....+    ..++..|+|||
T Consensus       162 G~a~~~~~~~~~~~----~~~t~~y~APE  186 (293)
T d1jksa_         162 GLAHKIDFGNEFKN----IFGTPEFVAPE  186 (293)
T ss_dssp             TTCEECTTSCBCSC----CCCCGGGCCHH
T ss_pred             hhhhhcCCCccccc----cCCCCcccCHH
Confidence            99998866543322    23445688887

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=4.2e-36  Score=246.74  Aligned_cols=165  Identities=20%  Similarity=0.273  Sum_probs=142.5

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcc---------hhhHHHHHHHHHhcC-CCceeeEeeEEecC
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDG---------HGSCINNIVYAAQMS-HDHILKLIGCCLET  129 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~---------~~~~~~E~~~l~~l~-h~niv~l~~~~~~~  129 (241)
                      ++|...+.||+|+||+||+|.+  +++.||||++.......         .+.+.+|+.++++++ ||||+++++++.++
T Consensus         3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~   82 (277)
T d1phka_           3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN   82 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred             ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccC
Confidence            5688899999999999999998  88999999997653221         235889999999996 99999999999999


Q ss_pred             CcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccc
Q 026214          130 PIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDF  209 (241)
Q Consensus       130 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~Df  209 (241)
                      +..|+||||+++|+|.+++...     +++++..+..++.||+.||.|||   +.+|+||||||+|||++.++.+||+||
T Consensus        83 ~~~~ivmE~~~~g~L~~~l~~~-----~~l~e~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nill~~~~~~kl~DF  154 (277)
T d1phka_          83 TFFFLVFDLMKKGELFDYLTEK-----VTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDF  154 (277)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCC
T ss_pred             cceEEEEEcCCCchHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HcCCcccccccceEEEcCCCCeEEccc
Confidence            9999999999999999999765     45999999999999999999999   999999999999999999999999999


Q ss_pred             cCceecCCCCccccceeecCCceeeeecC
Q 026214          210 SLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       210 G~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |+|+.+..+.....    ..++..|.+||
T Consensus       155 G~a~~~~~~~~~~~----~~gt~~y~~PE  179 (277)
T d1phka_         155 GFSCQLDPGEKLRE----VCGTPSYLAPE  179 (277)
T ss_dssp             TTCEECCTTCCBCC----CCSCGGGCCHH
T ss_pred             hheeEccCCCceee----eeccCCCCCHH
Confidence            99998876543221    22344566665

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-36  Score=253.34  Aligned_cols=176  Identities=19%  Similarity=0.264  Sum_probs=141.6

Q ss_pred             HHhcCCCcCCeeecccceEEEEEEE--CC-----eEEEEEEeecc-CCcchhhHHHHHHHHHhc-CCCceeeEeeEEecC
Q 026214           59 LATNNYDQKNVITEDWGCILYKGFW--QE-----RLISVMRFRES-NRDGHGSCINNIVYAAQM-SHDHILKLIGCCLET  129 (241)
Q Consensus        59 ~~~~~~~~~~~lg~G~~g~Vy~~~~--~~-----~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~  129 (241)
                      ...++|...++||+|+||+||+|.+  .+     ..||+|.+... .......+.+|+.++.++ +|||||++++++.+.
T Consensus        34 i~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~  113 (325)
T d1rjba_          34 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLS  113 (325)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             CCHHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeC
Confidence            3446788899999999999999997  22     36999998654 333456789999999998 899999999999999


Q ss_pred             CcceEEEeeCCCCCHHHHHhhcCC------------------CCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccC
Q 026214          130 PIPILAFESVEYGNLRDRILSASQ------------------PQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDF  191 (241)
Q Consensus       130 ~~~~lv~e~~~~gsL~~~l~~~~~------------------~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dl  191 (241)
                      +..++||||+++|+|.+++.....                  .....+++..++.++.|++.||.|||   +.+|+||||
T Consensus       114 ~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH---~~~IiHRDl  190 (325)
T d1rjba_         114 GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDL  190 (325)
T ss_dssp             SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEETTC
T ss_pred             CeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccC
Confidence            999999999999999999976421                  11245899999999999999999999   999999999


Q ss_pred             CCCCeeEcCCCcEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          192 KTAHILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       192 k~~Nill~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ||+|||++.++.+||+|||+|+.......... .....++..|+|||
T Consensus       191 Kp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~-~~~~~gt~~y~aPE  236 (325)
T d1rjba_         191 AARNVLVTHGKVVKICDFGLARDIMSDSNYVV-RGNARLPVKWMAPE  236 (325)
T ss_dssp             SGGGEEEETTTEEEECCCGGGSCGGGCTTSEE-ETTEEECGGGCCHH
T ss_pred             chhccccccCCeEEEeeccccccccCCCceee-eccccCCCccCChH
Confidence            99999999999999999999998765543221 11222355688988

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-35  Score=249.27  Aligned_cols=165  Identities=14%  Similarity=0.129  Sum_probs=141.2

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeC
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESV  139 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  139 (241)
                      +.|...+.||+|+||+||+|.+  +++.||+|.+.... .....+.+|+.+++.++||||+++++++.+++..|+||||+
T Consensus         5 ~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~-~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~~   83 (321)
T d1tkia_           5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFI   83 (321)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEecC
Confidence            5688899999999999999998  78999999997654 23456889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcC--CCcEEEccccCceecCC
Q 026214          140 EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNE--ENVAKMFDFSLSISIPE  217 (241)
Q Consensus       140 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~--~~~~ki~DfG~a~~~~~  217 (241)
                      ++|+|.+++...    ...+++..+..++.||+.||.|||   +.+|+||||||+|||++.  .+.+||+|||+++....
T Consensus        84 ~gg~L~~~i~~~----~~~l~e~~~~~i~~qi~~al~yLH---~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~  156 (321)
T d1tkia_          84 SGLDIFERINTS----AFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP  156 (321)
T ss_dssp             CCCBHHHHHTSS----SCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCT
T ss_pred             CCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---HcCCCcccccccceeecCCCceEEEEcccchhhcccc
Confidence            999999999554    346899999999999999999999   999999999999999975  45899999999998765


Q ss_pred             CCccccceeecCCceeeeecC
Q 026214          218 GGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .....+    ...+..|++||
T Consensus       157 ~~~~~~----~~~t~~y~ape  173 (321)
T d1tkia_         157 GDNFRL----LFTAPEYYAPE  173 (321)
T ss_dssp             TCEEEE----EESCGGGSCHH
T ss_pred             CCcccc----cccccccccch
Confidence            443222    22334567776

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=7.7e-36  Score=254.05  Aligned_cols=164  Identities=16%  Similarity=0.191  Sum_probs=139.6

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHH---HHHHHhcCCCceeeEeeEEecCCcce
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINN---IVYAAQMSHDHILKLIGCCLETPIPI  133 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E---~~~l~~l~h~niv~l~~~~~~~~~~~  133 (241)
                      ++|...++||+|+||.||+|.+  ++..||||++....   ......+.+|   +.+++.++|||||++++++.+++..|
T Consensus         4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~   83 (364)
T d1omwa3           4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS   83 (364)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred             HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEE
Confidence            5788899999999999999999  79999999987532   1222334444   66677778999999999999999999


Q ss_pred             EEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCce
Q 026214          134 LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSI  213 (241)
Q Consensus       134 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~  213 (241)
                      +||||+++|+|.+++...     ..+++..+..++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+|+
T Consensus        84 ivmE~~~gg~L~~~l~~~-----~~~~e~~~~~~~~qi~~aL~ylH---~~~iiHrDlKP~NILl~~~g~iKl~DFGla~  155 (364)
T d1omwa3          84 FILDLMNGGDLHYHLSQH-----GVFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLAC  155 (364)
T ss_dssp             EEECCCCSCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSSSCEEECCCTTCE
T ss_pred             EEEEecCCCcHHHHHHhc-----ccccHHHHHHHHHHHHHHHHHHH---HCCccceeeccceeEEcCCCcEEEeeeceee
Confidence            999999999999999765     34889999999999999999999   9999999999999999999999999999999


Q ss_pred             ecCCCCccccceeecCCceeeeecC
Q 026214          214 SIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .+.......     ..++..|+|||
T Consensus       156 ~~~~~~~~~-----~~GT~~y~APE  175 (364)
T d1omwa3         156 DFSKKKPHA-----SVGTHGYMAPE  175 (364)
T ss_dssp             ECSSSCCCS-----CCSCGGGCCHH
T ss_pred             ecCCCcccc-----cccccccchhH
Confidence            876553322     23567788888

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=8.4e-36  Score=252.58  Aligned_cols=163  Identities=13%  Similarity=0.140  Sum_probs=143.6

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeecc---CCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRES---NRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF  136 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  136 (241)
                      ++|...+.||+|+||.||+|.+  ++..||||++...   .....+.+.+|+.+++.++||||+++++++.+....++||
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~  120 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccccc
Confidence            4688899999999999999998  7999999998753   2234567899999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP  216 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~  216 (241)
                      ||+.+|+|.+++...     ..+++..+..++.||+.||.|||   +.+||||||||+|||++.++.+||+|||+|+.+.
T Consensus       121 e~~~~g~l~~~l~~~-----~~l~e~~~~~i~~qi~~aL~yLH---~~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~  192 (350)
T d1rdqe_         121 EYVAGGEMFSHLRRI-----GRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK  192 (350)
T ss_dssp             ECCTTCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred             ccccccchhhhHhhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCEecCcCCHHHcccCCCCCEEeeeceeeeecc
Confidence            999999999999765     35899999999999999999999   9999999999999999999999999999999886


Q ss_pred             CCCccccceeecCCceeeeecC
Q 026214          217 EGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .....      ..++..|+|||
T Consensus       193 ~~~~~------~~Gt~~Y~APE  208 (350)
T d1rdqe_         193 GRTWT------LCGTPEALAPE  208 (350)
T ss_dssp             SCBCC------CEECGGGCCHH
T ss_pred             ccccc------ccCccccCCHH
Confidence            54322      22445688887

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-36  Score=247.31  Aligned_cols=168  Identities=20%  Similarity=0.248  Sum_probs=130.1

Q ss_pred             hcCCCcCCeeecccceEEEEEEE-----CCeEEEEEEeeccCCc-chhhHHHHHHHHHhcCCCceeeEeeEEecCCcceE
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW-----QERLISVMRFRESNRD-GHGSCINNIVYAAQMSHDHILKLIGCCLETPIPIL  134 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  134 (241)
                      .++|...+.||+|+||.||+|.+     .+..||||.+...... ..+.+.+|+.++++++||||+++++++. ++..++
T Consensus         6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~i   84 (273)
T d1mp8a_           6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI   84 (273)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred             HHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEEE
Confidence            46788899999999999999988     2356899988654322 3467999999999999999999999985 567899


Q ss_pred             EEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCcee
Q 026214          135 AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSIS  214 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~  214 (241)
                      ||||+++|+|.+++...    ...+++..++.++.|++.||.|||   +.+|+||||||+||+++.++.+||+|||+|+.
T Consensus        85 v~E~~~~g~l~~~~~~~----~~~l~~~~~~~~~~qi~~gl~ylH---~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~  157 (273)
T d1mp8a_          85 IMELCTLGELRSFLQVR----KYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY  157 (273)
T ss_dssp             EEECCTTEEHHHHHHHT----TTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC------
T ss_pred             EEEeccCCcHHhhhhcc----CCCCCHHHHHHHHHHHHHHhhhhc---ccCeeccccchhheeecCCCcEEEccchhhee
Confidence            99999999999988665    456899999999999999999999   99999999999999999999999999999998


Q ss_pred             cCCCCccccceeecCCceeeeecC
Q 026214          215 IPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +..........  ..++..|+|||
T Consensus       158 ~~~~~~~~~~~--~~gt~~y~apE  179 (273)
T d1mp8a_         158 MEDSTYYKASK--GKLPIKWMAPE  179 (273)
T ss_dssp             ---------------CCGGGCCHH
T ss_pred             ccCCcceeccc--eecCcccchhh
Confidence            76554433333  23455678887

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=2.3e-35  Score=242.39  Aligned_cols=169  Identities=21%  Similarity=0.242  Sum_probs=137.6

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCc---chhhHHHHHHHHHhcCCCceeeEeeEEecCC----cc
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRD---GHGSCINNIVYAAQMSHDHILKLIGCCLETP----IP  132 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~  132 (241)
                      +.|...+.||+|+||.||+|.+  +++.||||.++.....   ....+.+|+.+++.++||||+++++++...+    ..
T Consensus         7 drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~   86 (277)
T d1o6ya_           7 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP   86 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred             ceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceE
Confidence            5688899999999999999998  8999999999764322   2456899999999999999999999997654    37


Q ss_pred             eEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCc
Q 026214          133 ILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS  212 (241)
Q Consensus       133 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a  212 (241)
                      |+||||+++++|.+++...     .++++..+..++.|++.||.|||   +.+|+||||||+|||++.++..+++|||++
T Consensus        87 ~lvmE~~~g~~L~~~~~~~-----~~l~~~~~~~i~~qi~~al~~lH---~~~iiHrDiKP~NIll~~~~~~~l~d~~~~  158 (277)
T d1o6ya_          87 YIVMEYVDGVTLRDIVHTE-----GPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIA  158 (277)
T ss_dssp             EEEEECCCEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTSCEEECCCTTC
T ss_pred             EEEEECCCCCEehhhhccc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCccCccccCcccccCccccceeehhhhh
Confidence            8999999999999998665     45999999999999999999999   999999999999999999999999999999


Q ss_pred             eecCCCCccccceeecCCceeeeecC
Q 026214          213 ISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .................++..|+|||
T Consensus       159 ~~~~~~~~~~~~~~~~~Gt~~Y~aPE  184 (277)
T d1o6ya_         159 RAIADSGNSVTQTAAVIGTAQYLSPE  184 (277)
T ss_dssp             EECC----------------TTCCHH
T ss_pred             hhhccccccccccccccCcccccCHH
Confidence            87765544444444455677889998

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-35  Score=247.20  Aligned_cols=168  Identities=19%  Similarity=0.328  Sum_probs=136.9

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCe----EEEEEEeecc-CCcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QER----LISVMRFRES-NRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPIL  134 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  134 (241)
                      ..|...++||+|+||.||+|.+  ++.    +||+|.+... .....+.|.+|+.++++++|||||+++|+|.++ ..++
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~   87 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   87 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEE
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeE
Confidence            3488889999999999999998  443    6899988654 334567899999999999999999999999865 5677


Q ss_pred             EEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCcee
Q 026214          135 AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSIS  214 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~  214 (241)
                      ++|++.+++|.+.+...    ...+++..++.++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+|+.
T Consensus        88 v~e~~~~~~l~~~~~~~----~~~~~~~~~~~i~~qi~~gl~yLH---~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~  160 (317)
T d1xkka_          88 ITQLMPFGCLLDYVREH----KDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL  160 (317)
T ss_dssp             EEECCTTCBHHHHHHHT----SSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCCSHHHH
T ss_pred             EEEeccCCccccccccc----ccCCCHHHHHHHHHHHHHHHHHHH---HcCcccCcchhhcceeCCCCCeEeecccccee
Confidence            88999999999988765    456999999999999999999999   99999999999999999999999999999998


Q ss_pred             cCCCCccccceeecCCceeeeecC
Q 026214          215 IPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +......... ....++..|+|||
T Consensus       161 ~~~~~~~~~~-~~~~gt~~y~APE  183 (317)
T d1xkka_         161 LGAEEKEYHA-EGGKVPIKWMALE  183 (317)
T ss_dssp             TTTTCC---------CCTTTSCHH
T ss_pred             cccccccccc-cccccCccccChH
Confidence            8765443322 2234566789998

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=8.1e-36  Score=247.93  Aligned_cols=180  Identities=26%  Similarity=0.299  Sum_probs=146.8

Q ss_pred             HHHHHHhcCCCcCCeeecccceEEEEEEE-------CCeEEEEEEeeccCCc-chhhHHHHHHHHHhcCCCceeeEeeEE
Q 026214           55 QELKLATNNYDQKNVITEDWGCILYKGFW-------QERLISVMRFRESNRD-GHGSCINNIVYAAQMSHDHILKLIGCC  126 (241)
Q Consensus        55 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~  126 (241)
                      .+++.+.++|+..+.||+|+||.||+|.+       ++..||||++...... ..+.|.+|+.+++.++||||+++++++
T Consensus         6 ~~~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~   85 (301)
T d1lufa_           6 LSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVC   85 (301)
T ss_dssp             HHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             hhccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeee
Confidence            34556778899999999999999999987       3478999998765432 346799999999999999999999999


Q ss_pred             ecCCcceEEEeeCCCCCHHHHHhhcCC-------------------CCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeE
Q 026214          127 LETPIPILAFESVEYGNLRDRILSASQ-------------------PQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIV  187 (241)
Q Consensus       127 ~~~~~~~lv~e~~~~gsL~~~l~~~~~-------------------~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~iv  187 (241)
                      ...+..+++|||+++|+|.+++.....                   .....+++..++.++.|++.||.|||   +.++|
T Consensus        86 ~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH---~~~iv  162 (301)
T d1lufa_          86 AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFV  162 (301)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCC
T ss_pred             ccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcc---cCCeE
Confidence            999999999999999999999965311                   12345889999999999999999999   99999


Q ss_pred             EccCCCCCeeEcCCCcEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          188 YRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       188 H~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ||||||+|||++.++.+||+|||+|+.+.+....... .....+..|+|||
T Consensus       163 HrDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~-~~~~~~~~y~aPE  212 (301)
T d1lufa_         163 HRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKAD-GNDAIPIRWMPPE  212 (301)
T ss_dssp             CSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC-----CCBCGGGCCHH
T ss_pred             eeEEcccceEECCCCcEEEccchhheeccCCcccccc-CCCCcCcCcCCHH
Confidence            9999999999999999999999999877554332221 1222334578887

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.7e-35  Score=245.14  Aligned_cols=166  Identities=16%  Similarity=0.205  Sum_probs=142.3

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC---CcchhhHHHHHHHHH-hcCCCceeeEeeEEecCCcceEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN---RDGHGSCINNIVYAA-QMSHDHILKLIGCCLETPIPILA  135 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~-~l~h~niv~l~~~~~~~~~~~lv  135 (241)
                      ++|...+.||+|+||+||+|.+  +++.||||++++..   ....+.+..|..++. .++||||+++++++.+++..|+|
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv   81 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV   81 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence            5688899999999999999999  89999999997532   234556777877765 67999999999999999999999


Q ss_pred             EeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceec
Q 026214          136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI  215 (241)
Q Consensus       136 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~  215 (241)
                      |||+++|+|.+++...     ..+++..+..++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+|+..
T Consensus        82 mEy~~~g~L~~~i~~~-----~~~~e~~~~~~~~qi~~al~ylH---~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~  153 (320)
T d1xjda_          82 MEYLNGGDLMYHIQSC-----HKFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKEN  153 (320)
T ss_dssp             EECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred             EeecCCCcHHHHhhcc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCcccceeecCCCceeccccchhhhc
Confidence            9999999999999765     34899999999999999999999   999999999999999999999999999999876


Q ss_pred             CCCCccccceeecCCceeeeecC
Q 026214          216 PEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ........   ...++..|+|||
T Consensus       154 ~~~~~~~~---~~~gt~~y~aPE  173 (320)
T d1xjda_         154 MLGDAKTN---TFCGTPDYIAPE  173 (320)
T ss_dssp             CCTTCCBC---CCCSCGGGCCHH
T ss_pred             cccccccc---ccCCCCCcCCHH
Confidence            65433322   223556788887

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-35  Score=243.66  Aligned_cols=169  Identities=17%  Similarity=0.312  Sum_probs=133.1

Q ss_pred             cCCCcCCeeecccceEEEEEEE---C--CeEEEEEEeeccC---CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcce
Q 026214           62 NNYDQKNVITEDWGCILYKGFW---Q--ERLISVMRFRESN---RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPI  133 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~---~--~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  133 (241)
                      ++|...+.||+|+||.||+|.+   +  ...||||.+....   ....+.|.+|+.++++++||||++++|++.+ +..+
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~   86 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMK   86 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchh
Confidence            4577888999999999999987   2  2478999987542   2334679999999999999999999999975 4678


Q ss_pred             EEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCce
Q 026214          134 LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSI  213 (241)
Q Consensus       134 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~  213 (241)
                      +||||+++|+|.+.+...    ..++++..++.++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++
T Consensus        87 lv~e~~~~~~l~~~~~~~----~~~l~~~~~~~~~~qi~~gl~ylH---~~~iiHrDikp~NIll~~~~~vkl~DfGl~~  159 (273)
T d1u46a_          87 MVTELAPLGSLLDRLRKH----QGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMR  159 (273)
T ss_dssp             EEEECCTTCBHHHHHHHH----GGGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred             eeeeeecCcchhhhhhcc----cCCCCHHHHHHHHHHHHHHHHHhh---hCCEeeeeecHHHhccccccceeeccchhhh
Confidence            999999999999988765    456999999999999999999999   9999999999999999999999999999999


Q ss_pred             ecCCCCccccceeecCCceeeeecC
Q 026214          214 SIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .+...............+..|+|||
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~aPE  184 (273)
T d1u46a_         160 ALPQNDDHYVMQEHRKVPFAWCAPE  184 (273)
T ss_dssp             ECCC-CCEEEC-----CCGGGCCHH
T ss_pred             hcccCCCcceecCccccCcccCCHH
Confidence            9876655444333334455678887

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-35  Score=245.14  Aligned_cols=167  Identities=19%  Similarity=0.248  Sum_probs=139.1

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEe
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFE  137 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  137 (241)
                      ++|...+.||+|+||.||+|.+  +++.||||+++...  ......+.+|+.++++++|||||++++++.+++..++|||
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e   81 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   81 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence            4788889999999999999999  78999999996543  2235779999999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCC
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE  217 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~  217 (241)
                      |+.+ ++.+++...   ....+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+|+....
T Consensus        82 ~~~~-~~~~~~~~~---~~~~l~e~~~~~~~~qil~~L~yLH---~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~  154 (298)
T d1gz8a_          82 FLHQ-DLKKFMDAS---ALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV  154 (298)
T ss_dssp             CCSE-EHHHHHHHT---TTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCC
T ss_pred             ecCC-chhhhhhhh---cccCCCHHHHHHHHHHHHHHHHHhh---cCCEEccccCchheeecccCcceeccCCcceeccC
Confidence            9974 666665443   2456999999999999999999999   99999999999999999999999999999988765


Q ss_pred             CCccccceeecCCceeeeecC
Q 026214          218 GGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +.....   ...++..|.+||
T Consensus       155 ~~~~~~---~~~gt~~y~apE  172 (298)
T d1gz8a_         155 PVRTYT---HEVVTLWYRAPE  172 (298)
T ss_dssp             CSBCTT---CCBCCCTTCCHH
T ss_pred             Ccccce---eecccceeeehh
Confidence            543322   123445667776

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.4e-36  Score=243.40  Aligned_cols=163  Identities=20%  Similarity=0.251  Sum_probs=132.2

Q ss_pred             cCCCcCCeeecccceEEEEEEECCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEec-CCcceEEEeeCC
Q 026214           62 NNYDQKNVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLE-TPIPILAFESVE  140 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~lv~e~~~  140 (241)
                      ++|...+.||+|+||.||+|.+.+..||||+++...  ..+.+.+|+.++++++||||++++|++.+ .+..++||||++
T Consensus         7 ~~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~i~~~~--~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~~   84 (262)
T d1byga_           7 KELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA   84 (262)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCT
T ss_pred             HHeEEeEEEecCCCeEEEEEEECCeEEEEEEECcHH--HHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEeccC
Confidence            456778899999999999999999999999997543  45779999999999999999999999865 456899999999


Q ss_pred             CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCCc
Q 026214          141 YGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGT  220 (241)
Q Consensus       141 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~~  220 (241)
                      +|+|.+++...   ....+++..++.++.||+.||.|||   +.+|+||||||+|||++.++.+|++|||+++.......
T Consensus        85 ~g~L~~~l~~~---~~~~l~~~~~~~i~~~i~~al~ylH---~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~~  158 (262)
T d1byga_          85 KGSLVDYLRSR---GRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD  158 (262)
T ss_dssp             TEEHHHHHHHH---HHHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC---------
T ss_pred             CCCHHHHHHhc---CCCCCCHHHHHHHHHHHHhhccccc---cCceeccccchHhheecCCCCEeecccccceecCCCCc
Confidence            99999999764   2345899999999999999999999   99999999999999999999999999999987654332


Q ss_pred             cccceeecCCceeeeecC
Q 026214          221 SGAKCLKSERTEICCVRE  238 (241)
Q Consensus       221 ~~~~~~~~~~~~~~~~~e  238 (241)
                      .      ...+..|+|||
T Consensus       159 ~------~~~~~~y~aPE  170 (262)
T d1byga_         159 T------GKLPVKWTAPE  170 (262)
T ss_dssp             ---------CCTTTSCHH
T ss_pred             c------ccccccCCChH
Confidence            2      22344577887

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-35  Score=245.07  Aligned_cols=161  Identities=20%  Similarity=0.224  Sum_probs=133.1

Q ss_pred             CCeeecccceEEEEEEE--CCeEEEEEEeeccCCc-----chhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEeeC
Q 026214           67 KNVITEDWGCILYKGFW--QERLISVMRFRESNRD-----GHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESV  139 (241)
Q Consensus        67 ~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  139 (241)
                      .++||+|+||+||+|.+  +++.||||++......     ..+.+.+|+.+++.++|||||++++++..++..++||||+
T Consensus         3 l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~   82 (299)
T d1ua2a_           3 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM   82 (299)
T ss_dssp             EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECC
T ss_pred             ceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhhh
Confidence            46899999999999998  7899999998654321     2356899999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCC
Q 026214          140 EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGG  219 (241)
Q Consensus       140 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~  219 (241)
                      .++++..+. .    ....+++..+..++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+|+....+.
T Consensus        83 ~~~~~~~~~-~----~~~~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~  154 (299)
T d1ua2a_          83 ETDLEVIIK-D----NSLVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN  154 (299)
T ss_dssp             SEEHHHHHT-T----CCSSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCC
T ss_pred             cchHHhhhh-h----cccCCCHHHHHHHHHHHHHHHHHhh---ccceecccCCcceEEecCCCccccccCccccccCCCc
Confidence            876665554 2    2456888999999999999999999   9999999999999999999999999999998776554


Q ss_pred             ccccceeecCCceeeeecC
Q 026214          220 TSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~e  238 (241)
                      ....   ...++..|+|||
T Consensus       155 ~~~~---~~~gt~~y~aPE  170 (299)
T d1ua2a_         155 RAYT---HQVVTRWYRAPE  170 (299)
T ss_dssp             CCCC---CSCCCCTTCCHH
T ss_pred             cccc---ceecChhhccHH
Confidence            3322   223456788888

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-35  Score=245.32  Aligned_cols=167  Identities=20%  Similarity=0.220  Sum_probs=134.6

Q ss_pred             CCCcCCeeecccceEEEEEEECCeEEEEEEeeccCCcchhhHHHH--HHHHHhcCCCceeeEeeEEecCC----cceEEE
Q 026214           63 NYDQKNVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINN--IVYAAQMSHDHILKLIGCCLETP----IPILAF  136 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~E--~~~l~~l~h~niv~l~~~~~~~~----~~~lv~  136 (241)
                      .|...+.||+|+||.||+|++++..||||++....   ...+.+|  +..+..++||||+++++++.+.+    ..++||
T Consensus         4 ~~~l~~~iG~G~fg~Vy~~~~~g~~vAvK~~~~~~---~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~   80 (303)
T d1vjya_           4 TIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS   80 (303)
T ss_dssp             GEEEEEEEECCSSSEEEEEEETTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred             EEEEEEEEeeCCCeEEEEEEECCEEEEEEEECccc---hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEE
Confidence            45667899999999999999999999999986542   3344444  44556789999999999998654    579999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCC-----CCCCeEEccCCCCCeeEcCCCcEEEccccC
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFG-----FPRPIVYRDFKTAHILFNEENVAKMFDFSL  211 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-----~~~~ivH~dlk~~Nill~~~~~~ki~DfG~  211 (241)
                      ||+++|+|.+++...      .+++..++.++.|++.||.|+|+.     ..++|+||||||+||||+.++.+||+|||+
T Consensus        81 Ey~~~g~L~~~l~~~------~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl  154 (303)
T d1vjya_          81 DYHEHGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL  154 (303)
T ss_dssp             ECCTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred             ecccCCCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCc
Confidence            999999999999653      489999999999999999999932     126999999999999999999999999999


Q ss_pred             ceecCCCCcccc-ceeecCCceeeeecC
Q 026214          212 SISIPEGGTSGA-KCLKSERTEICCVRE  238 (241)
Q Consensus       212 a~~~~~~~~~~~-~~~~~~~~~~~~~~e  238 (241)
                      ++.+........ ......++..|+|||
T Consensus       155 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE  182 (303)
T d1vjya_         155 AVRHDSATDTIDIAPNHRVGTKRYMAPE  182 (303)
T ss_dssp             CEEEETTTTEECC----CCSCGGGCCHH
T ss_pred             cccccCCCcceeccccceecccCcCChh
Confidence            998866543322 222334566788987

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-35  Score=244.18  Aligned_cols=183  Identities=17%  Similarity=0.261  Sum_probs=138.4

Q ss_pred             cCHHHHHHHhcCCCcCCeeecccceEEEEEEE-------CCeEEEEEEeeccCC-cchhhHHHHHHHHHhc-CCCceeeE
Q 026214           52 FSAQELKLATNNYDQKNVITEDWGCILYKGFW-------QERLISVMRFRESNR-DGHGSCINNIVYAAQM-SHDHILKL  122 (241)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l  122 (241)
                      ++..++....++|...++||+|+||.||+|.+       +++.||||++..... ...+.+.+|...+.++ +|+||+.+
T Consensus         3 ~~~~~wei~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~   82 (299)
T d1ywna1           3 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL   82 (299)
T ss_dssp             CCHHHHBCCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             CCCccccccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEe
Confidence            45566666677899999999999999999997       346899999875432 3346688888888887 78999999


Q ss_pred             eeEEecC-CcceEEEeeCCCCCHHHHHhhcCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEcc
Q 026214          123 IGCCLET-PIPILAFESVEYGNLRDRILSASQ-----------PQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRD  190 (241)
Q Consensus       123 ~~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~d  190 (241)
                      ++++..+ ...+++|||+++|+|.+++.....           .....+++..+..++.|++.||.|||   +.+|+|||
T Consensus        83 ~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH---~~~ivHrD  159 (299)
T d1ywna1          83 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRD  159 (299)
T ss_dssp             EEEECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHH---HTTCCCSC
T ss_pred             eeeeccCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHH---hCCCcCCc
Confidence            9998765 468999999999999999975421           11345899999999999999999999   99999999


Q ss_pred             CCCCCeeEcCCCcEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          191 FKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       191 lk~~Nill~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |||+||||+.++.+||+|||+|+.......... .....++..|+|||
T Consensus       160 lKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~-~~~~~gt~~y~APE  206 (299)
T d1ywna1         160 LAARNILLSEKNVVKICDFGLARDIYKDPDYVR-KGDARLPLKWMAPE  206 (299)
T ss_dssp             CCGGGEEECGGGCEEECC------CCSCTTSCC-TTSCCCGGGGCCHH
T ss_pred             CCccceeECCCCcEEEccCcchhhccccccccc-cCceeeCccccchh
Confidence            999999999999999999999997765433221 12234566789998

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-34  Score=241.85  Aligned_cols=165  Identities=18%  Similarity=0.295  Sum_probs=137.8

Q ss_pred             CCeeecccceEEEEEEE--C---CeEEEEEEeecc-CCcchhhHHHHHHHHHhcCCCceeeEeeEEec-CCcceEEEeeC
Q 026214           67 KNVITEDWGCILYKGFW--Q---ERLISVMRFRES-NRDGHGSCINNIVYAAQMSHDHILKLIGCCLE-TPIPILAFESV  139 (241)
Q Consensus        67 ~~~lg~G~~g~Vy~~~~--~---~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~lv~e~~  139 (241)
                      .++||+|+||+||+|.+  +   ...||||++... .....++|.+|+.++++++||||++++|++.. ++..++||||+
T Consensus        32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~  111 (311)
T d1r0pa_          32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM  111 (311)
T ss_dssp             EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECC
T ss_pred             ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEe
Confidence            46899999999999998  2   236899998753 33345779999999999999999999999875 45789999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCCC
Q 026214          140 EYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGG  219 (241)
Q Consensus       140 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~~  219 (241)
                      ++|+|.+++...    ...+++..++.++.|++.||.|+|   +.+|+||||||+||||++++.+||+|||+++.+....
T Consensus       112 ~~g~l~~~~~~~----~~~~~~~~~~~i~~qia~gL~~lH---~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~  184 (311)
T d1r0pa_         112 KHGDLRNFIRNE----THNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE  184 (311)
T ss_dssp             TTCBHHHHHHCT----TCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTT
T ss_pred             ecCchhhhhccc----cccchHHHHHHHHHHHHHhhhhhc---ccCcccCCccHHhEeECCCCCEEEecccchhhccccc
Confidence            999999998765    445788899999999999999999   9999999999999999999999999999999886554


Q ss_pred             ccccce-eecCCceeeeecC
Q 026214          220 TSGAKC-LKSERTEICCVRE  238 (241)
Q Consensus       220 ~~~~~~-~~~~~~~~~~~~e  238 (241)
                      ...... ....++..|++||
T Consensus       185 ~~~~~~~~~~~gt~~y~aPE  204 (311)
T d1r0pa_         185 FDSVHNKTGAKLPVKWMALE  204 (311)
T ss_dssp             CCCTTCTTCSSCCGGGSCHH
T ss_pred             cccceecccccccccccChH
Confidence            332222 2334566788887

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-34  Score=244.06  Aligned_cols=164  Identities=16%  Similarity=0.252  Sum_probs=137.8

Q ss_pred             hcCCCcC-CeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhc-CCCceeeEeeEEec----CCcc
Q 026214           61 TNNYDQK-NVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQM-SHDHILKLIGCCLE----TPIP  132 (241)
Q Consensus        61 ~~~~~~~-~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~----~~~~  132 (241)
                      .++|... +.||+|+||.||+|.+  +++.||||++...     ..+.+|+.++.++ +||||+++++++.+    +...
T Consensus        10 ~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~-----~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~   84 (335)
T d2ozaa1          10 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL   84 (335)
T ss_dssp             GGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             ccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc-----HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEE
Confidence            3567665 5699999999999998  7899999998642     4578899987665 89999999999865    4568


Q ss_pred             eEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcC---CCcEEEccc
Q 026214          133 ILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNE---ENVAKMFDF  209 (241)
Q Consensus       133 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~---~~~~ki~Df  209 (241)
                      |+|||||+||+|.+++...   ....+++..+..++.|++.||.|||   +.+|+||||||+|||++.   .+.+||+||
T Consensus        85 ~ivmEy~~gg~L~~~i~~~---~~~~l~e~~~~~i~~qi~~al~ylH---~~~iiHRDiKp~NIll~~~~~~~~~Kl~DF  158 (335)
T d2ozaa1          85 LIVMECLDGGELFSRIQDR---GDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDF  158 (335)
T ss_dssp             EEEEECCCSEEHHHHHHSC---SCCCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCSSTTCCEEECCC
T ss_pred             EEEEECCCCCcHHHHHHhc---CCCCcCHHHHHHHHHHHHHHHHHHH---HcCCcccccccccccccccccccccccccc
Confidence            9999999999999999764   2356999999999999999999999   999999999999999975   567999999


Q ss_pred             cCceecCCCCccccceeecCCceeeeecCC
Q 026214          210 SLSISIPEGGTSGAKCLKSERTEICCVREN  239 (241)
Q Consensus       210 G~a~~~~~~~~~~~~~~~~~~~~~~~~~e~  239 (241)
                      |+|+.........    ...++..|+|||-
T Consensus       159 G~a~~~~~~~~~~----~~~gt~~y~aPE~  184 (335)
T d2ozaa1         159 GFAKETTSHNSLT----TPCYTPYYVAPEV  184 (335)
T ss_dssp             TTCEECCCCCCCC----CCSCCCSSCCCCC
T ss_pred             ceeeeccCCCccc----cccCCcccCCcHH
Confidence            9999887654432    2346678889983

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-34  Score=240.86  Aligned_cols=170  Identities=24%  Similarity=0.297  Sum_probs=139.0

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCe--EEEEEEeecc-CCcchhhHHHHHHHHHhc-CCCceeeEeeEEecCCcceEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QER--LISVMRFRES-NRDGHGSCINNIVYAAQM-SHDHILKLIGCCLETPIPILA  135 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~--~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv  135 (241)
                      ++|...++||+|+||.||+|.+  ++.  .||||++... .....+.+.+|+.++.++ +||||+++++++.+.+..++|
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV   89 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   89 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEE
Confidence            5677889999999999999998  554  5788887654 333557799999999999 799999999999999999999


Q ss_pred             EeeCCCCCHHHHHhhcC-----------CCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcE
Q 026214          136 FESVEYGNLRDRILSAS-----------QPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVA  204 (241)
Q Consensus       136 ~e~~~~gsL~~~l~~~~-----------~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~  204 (241)
                      |||+++|+|.+++....           ......+++..+..++.||+.||.|||   +.+|+||||||+|||++.++.+
T Consensus        90 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH---~~~iiHrDlkp~NIL~~~~~~~  166 (309)
T d1fvra_          90 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVA  166 (309)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCE
T ss_pred             EEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhh---cCCccccccccceEEEcCCCce
Confidence            99999999999996541           113467999999999999999999999   9999999999999999999999


Q ss_pred             EEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          205 KMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       205 ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ||+|||+|+.........    ...++..|++||
T Consensus       167 kl~DfG~a~~~~~~~~~~----~~~gt~~y~aPE  196 (309)
T d1fvra_         167 KIADFGLSRGQEVYVKKT----MGRLPVRWMAIE  196 (309)
T ss_dssp             EECCTTCEESSCEECCC--------CCTTTCCHH
T ss_pred             EEcccccccccccccccc----ceecCCcccchH
Confidence            999999998665433222    223455677777

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-34  Score=243.88  Aligned_cols=168  Identities=15%  Similarity=0.169  Sum_probs=137.5

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC-cchhhHHHHHHHHHhcCCCceeeEeeEEecCCc----ceE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR-DGHGSCINNIVYAAQMSHDHILKLIGCCLETPI----PIL  134 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----~~l  134 (241)
                      .+|...++||+|+||+||+|.+  +++.||||++..... ...+.+++|+.+|+.++||||+++++++.....    .++
T Consensus         8 ~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~   87 (345)
T d1pmea_           8 PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY   87 (345)
T ss_dssp             TTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred             CCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEE
Confidence            4588889999999999999998  899999999976432 234678999999999999999999999976542    344


Q ss_pred             EEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCcee
Q 026214          135 AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSIS  214 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~  214 (241)
                      +++++.+|+|.+++...      .+++..+..++.|++.||.|||   +++|+||||||+|||++.++.+||+|||+|..
T Consensus        88 l~~~~~~g~L~~~l~~~------~l~~~~i~~i~~qil~al~yLH---~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~  158 (345)
T d1pmea_          88 LVTHLMGADLYKLLKTQ------HLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV  158 (345)
T ss_dssp             EEEECCCEEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             EEEeecCCchhhhhhcC------CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCcceEEECCCCCEEEcccCceee
Confidence            55667789999999543      4899999999999999999999   99999999999999999999999999999998


Q ss_pred             cCCCCccccceeecCCceeeeecC
Q 026214          215 IPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ...............++..|.|||
T Consensus       159 ~~~~~~~~~~~~~~~gt~~y~aPE  182 (345)
T d1pmea_         159 ADPDHDHTGFLTEYVATRWYRAPE  182 (345)
T ss_dssp             CCGGGCBCCTTCCCCSCGGGCCGG
T ss_pred             ccCCCccceeeccccccceechHH
Confidence            766544443334445666788888

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-34  Score=235.33  Aligned_cols=164  Identities=15%  Similarity=0.174  Sum_probs=138.2

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCc------chhhHHHHHHHHHhcC--CCceeeEeeEEecCCc
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRD------GHGSCINNIVYAAQMS--HDHILKLIGCCLETPI  131 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~  131 (241)
                      +.|...++||+|+||.||+|.+  ++..||||.+......      ...++.+|+.++++++  ||||+++++++.+++.
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~   83 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS   83 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred             CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe
Confidence            5688899999999999999999  7899999998754321      2345778999999996  8999999999999999


Q ss_pred             ceEEEeeCCC-CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcC-CCcEEEccc
Q 026214          132 PILAFESVEY-GNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNE-ENVAKMFDF  209 (241)
Q Consensus       132 ~~lv~e~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~-~~~~ki~Df  209 (241)
                      .++||||+.+ +++.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++. ++.+||+||
T Consensus        84 ~~lv~e~~~~~~~l~~~~~~~-----~~l~e~~~~~~~~qi~~al~~lH---~~~iiHrDiKp~NIll~~~~~~vkl~DF  155 (273)
T d1xwsa_          84 FVLILERPEPVQDLFDFITER-----GALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDF  155 (273)
T ss_dssp             EEEEEECCSSEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCC
T ss_pred             EEEEEEeccCcchHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCccccCcccceEEecCCCeEEECcc
Confidence            9999999975 5788887654     45899999999999999999999   999999999999999985 579999999


Q ss_pred             cCceecCCCCccccceeecCCceeeeecC
Q 026214          210 SLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       210 G~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |+|+........     ...++..|+|||
T Consensus       156 G~a~~~~~~~~~-----~~~GT~~y~aPE  179 (273)
T d1xwsa_         156 GSGALLKDTVYT-----DFDGTRVYSPPE  179 (273)
T ss_dssp             TTCEECCSSCBC-----CCCSCGGGSCHH
T ss_pred             ccceeccccccc-----ccccCCCcCCHH
Confidence            999876544321     123566788887

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=2.4e-34  Score=237.20  Aligned_cols=166  Identities=19%  Similarity=0.191  Sum_probs=136.1

Q ss_pred             cCCCcCCeeecccceEEEEEEE-CCeEEEEEEeeccC--CcchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEee
Q 026214           62 NNYDQKNVITEDWGCILYKGFW-QERLISVMRFRESN--RDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  138 (241)
                      ++|...++||+|+||+||+|.+ ++..||||++....  ....+.+.+|+.++++++||||+++++++..++..++++|+
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~   81 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence            4688889999999999999999 88999999997643  22357799999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCCC
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG  218 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~~  218 (241)
                      +.++.+..+. ..    ...+++..+..++.||+.||.|||   +.+|+||||||+|||++.++.+|++|||+|.....+
T Consensus        82 ~~~~~~~~~~-~~----~~~l~~~~~~~i~~qi~~~L~~LH---~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~  153 (286)
T d1ob3a_          82 LDQDLKKLLD-VC----EGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP  153 (286)
T ss_dssp             CSEEHHHHHH-TS----TTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-
T ss_pred             ehhhhHHHHH-hh----cCCcchhhhHHHHHHHHHHHHHhc---cCcEEecCCCCceeeEcCCCCEEecccccceecccC
Confidence            9865555554 32    456999999999999999999999   999999999999999999999999999999887654


Q ss_pred             CccccceeecCCceeeeecC
Q 026214          219 GTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .......   ..+..|.+||
T Consensus       154 ~~~~~~~---~~~~~y~~pE  170 (286)
T d1ob3a_         154 VRKYTHE---IVTLWYRAPD  170 (286)
T ss_dssp             -----------CCCTTCCHH
T ss_pred             cccccee---cccchhhhHH
Confidence            3322211   1233456665

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.7e-35  Score=242.70  Aligned_cols=179  Identities=18%  Similarity=0.264  Sum_probs=146.6

Q ss_pred             HHHHHhcCCCcCCeeecccceEEEEEEEC-------CeEEEEEEeeccCC-cchhhHHHHHHHHHhcCCCceeeEeeEEe
Q 026214           56 ELKLATNNYDQKNVITEDWGCILYKGFWQ-------ERLISVMRFRESNR-DGHGSCINNIVYAAQMSHDHILKLIGCCL  127 (241)
Q Consensus        56 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~  127 (241)
                      +|....++|...+.||+|+||.||+|.+.       +..||||++..... .....|.+|+.++++++||||+++++++.
T Consensus        14 ~~ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~   93 (308)
T d1p4oa_          14 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS   93 (308)
T ss_dssp             TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEEC
T ss_pred             ceeecHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEe
Confidence            45555677888999999999999999872       46899999975432 23356899999999999999999999999


Q ss_pred             cCCcceEEEeeCCCCCHHHHHhhcC-----CCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCC
Q 026214          128 ETPIPILAFESVEYGNLRDRILSAS-----QPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEEN  202 (241)
Q Consensus       128 ~~~~~~lv~e~~~~gsL~~~l~~~~-----~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~  202 (241)
                      ..+..++||||+++|+|.+++....     ......+++..+..++.|++.||.|||   +.+|+||||||+|||++.++
T Consensus        94 ~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH---~~~ivHrDlk~~NiLld~~~  170 (308)
T d1p4oa_          94 QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDF  170 (308)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGEEECTTC
T ss_pred             cCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHh---hCCeeeceEcCCceeecCCc
Confidence            9999999999999999999986431     112345789999999999999999999   99999999999999999999


Q ss_pred             cEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          203 VAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       203 ~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .+||+|||+|+.+......... ....++..|++||
T Consensus       171 ~~Kl~DFGla~~~~~~~~~~~~-~~~~~t~~y~aPe  205 (308)
T d1p4oa_         171 TVKIGDFGMTRDIYETDYYRKG-GKGLLPVRWMSPE  205 (308)
T ss_dssp             CEEECCTTCCCGGGGGGCEEGG-GSSEECGGGCCHH
T ss_pred             eEEEeecccceeccCCcceeec-cceecccccCCHH
Confidence            9999999999987655432221 1223455678887

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-33  Score=235.51  Aligned_cols=178  Identities=16%  Similarity=0.225  Sum_probs=146.5

Q ss_pred             HHHHhcCCCcCCeeecccceEEEEEEE-------CCeEEEEEEeeccCC-cchhhHHHHHHHHHhc-CCCceeeEeeEEe
Q 026214           57 LKLATNNYDQKNVITEDWGCILYKGFW-------QERLISVMRFRESNR-DGHGSCINNIVYAAQM-SHDHILKLIGCCL  127 (241)
Q Consensus        57 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~  127 (241)
                      +....+.|...+.||+|+||.||+|.+       ++..||||+++.... .....+.+|+.++..+ +|||||++++++.
T Consensus        18 ~~~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~   97 (311)
T d1t46a_          18 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT   97 (311)
T ss_dssp             GBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             ccCCHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEe
Confidence            444557788899999999999999986       457899999976542 2345789999999999 7999999999999


Q ss_pred             cCCcceEEEeeCCCCCHHHHHhhcCC-------------CCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCC
Q 026214          128 ETPIPILAFESVEYGNLRDRILSASQ-------------PQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTA  194 (241)
Q Consensus       128 ~~~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~  194 (241)
                      +.+..+++|||+++|+|.+++.....             .....+++..+..++.||+.||.|||   +.+++||||||+
T Consensus        98 ~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH---~~~ivHrDLKp~  174 (311)
T d1t46a_          98 IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAAR  174 (311)
T ss_dssp             SSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGG
T ss_pred             eCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccccc
Confidence            99999999999999999999976421             12346899999999999999999999   999999999999


Q ss_pred             CeeEcCCCcEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          195 HILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       195 Nill~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |||++.++.+|++|||+++........... ....++..|+|||
T Consensus       175 NIl~~~~~~~ki~DfG~~~~~~~~~~~~~~-~~~~gt~~y~aPE  217 (311)
T d1t46a_         175 NILLTHGRITKICDFGLARDIKNDSNYVVK-GNARLPVKWMAPE  217 (311)
T ss_dssp             GEEEETTTEEEECCCGGGSCTTSCTTSEEC-SSSEECGGGCCHH
T ss_pred             cccccccCcccccccchheeccCCCcceEe-eecccChHHcCHH
Confidence            999999999999999999987655433221 1223345678887

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-33  Score=238.47  Aligned_cols=163  Identities=17%  Similarity=0.200  Sum_probs=130.7

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCceeeEeeEEecC------CcceE
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLET------PIPIL  134 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~~~l  134 (241)
                      .|...++||+|+||+||+|.+  +++.||||++.....    ...+|+.++++++||||+++++++...      ...++
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~----~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~l   96 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL   96 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS----SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEE
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch----HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEE
Confidence            477788999999999999999  799999999976542    234799999999999999999998543      24789


Q ss_pred             EEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCC-cEEEccccCce
Q 026214          135 AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEEN-VAKMFDFSLSI  213 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~-~~ki~DfG~a~  213 (241)
                      ||||++++ +.+.+.... .....+++..+..++.|++.||.|||   +.+|+||||||+|||++.++ .+||+|||+|+
T Consensus        97 v~Ey~~~~-~~~~l~~~~-~~~~~l~~~~~~~i~~qil~aL~yLH---~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~  171 (350)
T d1q5ka_          97 VLDYVPET-VYRVARHYS-RAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK  171 (350)
T ss_dssp             EEECCSEE-HHHHHHHHH-HTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTTCCEEECCCTTCE
T ss_pred             EEeccCCc-cHHHHHhhh-hccCCCCHHHHHHHHHHHHHHHHHHH---hcCCcccCCCcceEEEecCCCceeEecccchh
Confidence            99999864 444443210 12456999999999999999999999   99999999999999998765 89999999999


Q ss_pred             ecCCCCccccceeecCCceeeeecC
Q 026214          214 SIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .+.......+    ..++..|.|||
T Consensus       172 ~~~~~~~~~~----~~gt~~y~aPE  192 (350)
T d1q5ka_         172 QLVRGEPNVS----YICSRYYRAPE  192 (350)
T ss_dssp             ECCTTSCCCS----CCSCTTSCCHH
T ss_pred             hccCCccccc----ccccccccChH
Confidence            8765543322    23455677776

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=4.5e-33  Score=233.76  Aligned_cols=159  Identities=16%  Similarity=0.201  Sum_probs=135.0

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcC-CCceeeEeeEEecC--CcceEEE
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMS-HDHILKLIGCCLET--PIPILAF  136 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~--~~~~lv~  136 (241)
                      ++|...++||+|+||+||+|.+  +++.||||+++..   ..+++.+|+.+|..+. ||||+++++++...  ...++||
T Consensus        35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~---~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~  111 (328)
T d3bqca1          35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF  111 (328)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEE
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH---HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEE
Confidence            5688899999999999999999  7999999998654   3567899999999995 99999999998743  5689999


Q ss_pred             eeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCC-CcEEEccccCceec
Q 026214          137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEE-NVAKMFDFSLSISI  215 (241)
Q Consensus       137 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~-~~~ki~DfG~a~~~  215 (241)
                      ||+.+++|....        ..+++..+..++.||+.||.|||   +.+|+||||||+|||++.+ +.+||+|||+|+.+
T Consensus       112 e~~~~~~L~~~~--------~~l~e~~i~~i~~qil~aL~~LH---~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~  180 (328)
T d3bqca1         112 EHVNNTDFKQLY--------QTLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY  180 (328)
T ss_dssp             ECCCSCBGGGTT--------TSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCGGGCEEC
T ss_pred             eecCCCcHHHHh--------cCCCHHHHHHHHHHHHHHHHHHh---hcccccccccccceEEcCCCCeeeecccccceec
Confidence            999999987654        34899999999999999999999   9999999999999999865 46999999999988


Q ss_pred             CCCCccccceeecCCceeeeecC
Q 026214          216 PEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      .++....    ....+..|+|||
T Consensus       181 ~~~~~~~----~~~~t~~y~aPE  199 (328)
T d3bqca1         181 HPGQEYN----VRVASRYFKGPE  199 (328)
T ss_dssp             CTTCCCC----SCCSCGGGCCHH
T ss_pred             cCCCccc----ccccCccccCcc
Confidence            7654332    223455677887

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-33  Score=233.54  Aligned_cols=176  Identities=19%  Similarity=0.230  Sum_probs=139.7

Q ss_pred             HHhcCCCcCCeeecccceEEEEEEE--C-------CeEEEEEEeeccCC-cchhhHHHHHHHHHhc-CCCceeeEeeEEe
Q 026214           59 LATNNYDQKNVITEDWGCILYKGFW--Q-------ERLISVMRFRESNR-DGHGSCINNIVYAAQM-SHDHILKLIGCCL  127 (241)
Q Consensus        59 ~~~~~~~~~~~lg~G~~g~Vy~~~~--~-------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~  127 (241)
                      ...+.|...+.||+|+||.||+|.+  +       +..||||++..... .....+.+|...+.++ +|||||+++++|.
T Consensus        10 i~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~   89 (299)
T d1fgka_          10 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT   89 (299)
T ss_dssp             CCGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             ccHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccc
Confidence            3456788889999999999999987  2       24799999876543 3347789999999888 8999999999999


Q ss_pred             cCCcceEEEeeCCCCCHHHHHhhcCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCe
Q 026214          128 ETPIPILAFESVEYGNLRDRILSASQ-----------PQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHI  196 (241)
Q Consensus       128 ~~~~~~lv~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Ni  196 (241)
                      +++..++||||+++|+|.+++.....           .....+++..++.++.|++.||.|||   +.+||||||||+||
T Consensus        90 ~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH---~~~ivHrDiKp~Ni  166 (299)
T d1fgka_          90 QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNV  166 (299)
T ss_dssp             SSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGE
T ss_pred             cCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhh---hCCEEeeeecccce
Confidence            99999999999999999999975421           12356899999999999999999999   99999999999999


Q ss_pred             eEcCCCcEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          197 LFNEENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       197 ll~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |++.++.+||+|||+++............ ....+..|+|||
T Consensus       167 Ll~~~~~~kl~dfg~~~~~~~~~~~~~~~-~~~~~~~y~aPE  207 (299)
T d1fgka_         167 LVTEDNVMKIADFGLARDIHHIDYYKKTT-NGRLPVKWMAPE  207 (299)
T ss_dssp             EECTTCCEEECSTTCCCCGGGCCTTCCCT-TSCCGGGGSCHH
T ss_pred             eecCCCCeEeccchhhccccccccccccc-cCCCChhhhhhh
Confidence            99999999999999999886654433221 222344578887

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=3.8e-33  Score=235.89  Aligned_cols=162  Identities=15%  Similarity=0.135  Sum_probs=131.9

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC--cchhhHHHHHHHHHhcCCCceeeEeeEEecCC------
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR--DGHGSCINNIVYAAQMSHDHILKLIGCCLETP------  130 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------  130 (241)
                      .+.|...++||+|+||+||+|.+  +++.||||++.....  ...+.+.+|+.+|+.++|||||+++++|...+      
T Consensus        17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~   96 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT   96 (346)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             CCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccc
Confidence            46788889999999999999998  799999999975432  23467899999999999999999999997654      


Q ss_pred             cceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEcccc
Q 026214          131 IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFS  210 (241)
Q Consensus       131 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG  210 (241)
                      ..++||||+ +.+|..++..      ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+|++|||
T Consensus        97 ~~~lv~e~~-~~~l~~~~~~------~~l~~~~~~~~~~qi~~aL~~LH---~~~IiHrDiKp~NIL~~~~~~~kl~Dfg  166 (346)
T d1cm8a_          97 DFYLVMPFM-GTDLGKLMKH------EKLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFG  166 (346)
T ss_dssp             CCEEEEECC-SEEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCT
T ss_pred             eEEEEEecc-cccHHHHHHh------ccccHHHHHHHHHHHHHHHHHHH---hCCCcccccCcchhhccccccccccccc
Confidence            469999999 4688887743      34999999999999999999999   9999999999999999999999999999


Q ss_pred             CceecCCCCccccceeecCCceeeeecC
Q 026214          211 LSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       211 ~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      +|+......+.      ..++..|+|||
T Consensus       167 ~a~~~~~~~~~------~~~t~~y~aPE  188 (346)
T d1cm8a_         167 LARQADSEMTG------YVVTRWYRAPE  188 (346)
T ss_dssp             TCEECCSSCCS------SCSCGGGCCTH
T ss_pred             ceeccCCcccc------ccccccccCHH
Confidence            99987655432      23445677887

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=1e-32  Score=230.51  Aligned_cols=170  Identities=16%  Similarity=0.193  Sum_probs=135.4

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeecc--CCcchhhHHHHHHHHHhcCCCceeeEeeEEec--------
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRES--NRDGHGSCINNIVYAAQMSHDHILKLIGCCLE--------  128 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--------  128 (241)
                      .++|...++||+|+||+||+|.+  +++.||||++...  ......++.+|+.++++++||||+++++++..        
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~   88 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   88 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccccc
Confidence            36788899999999999999998  7899999998654  23345678999999999999999999998855        


Q ss_pred             CCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEcc
Q 026214          129 TPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFD  208 (241)
Q Consensus       129 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~D  208 (241)
                      .+..+++|||+.++++.... .    ....+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|
T Consensus        89 ~~~~~iv~e~~~~~~~~~~~-~----~~~~~~~~~~~~i~~qil~~l~~lH---~~~ivHrDlKp~NILl~~~~~~kl~d  160 (318)
T d3blha1          89 KGSIYLVFDFCEHDLAGLLS-N----VLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLAD  160 (318)
T ss_dssp             --CEEEEEECCCEEHHHHHT-C----TTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECC
T ss_pred             CceEEEEEeccCCCccchhh-h----cccccccHHHHHHHHHHHHHHHHhc---cCCEEecCcCchheeecCCCcEEeee
Confidence            34579999999865554443 2    2456889999999999999999999   99999999999999999999999999


Q ss_pred             ccCceecCCCCcccc-ceeecCCceeeeecC
Q 026214          209 FSLSISIPEGGTSGA-KCLKSERTEICCVRE  238 (241)
Q Consensus       209 fG~a~~~~~~~~~~~-~~~~~~~~~~~~~~e  238 (241)
                      ||+|+.+........ ......++..|+|||
T Consensus       161 fg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE  191 (318)
T d3blha1         161 FGLARAFSLAKNSQPNRYTNRVVTLWYRPPE  191 (318)
T ss_dssp             CTTCEECCC-----CCCCCSCCSCGGGCCHH
T ss_pred             cceeeecccccccccccccceecCHHHhhHH
Confidence            999998875543322 222334667788888

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=1.7e-32  Score=226.32  Aligned_cols=151  Identities=17%  Similarity=0.219  Sum_probs=134.9

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC--cchhhHHHHHHHHHhcCCCceeeEeeEEecCCcceEEEe
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR--DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFE  137 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  137 (241)
                      +.|+..+.||+|+||+||+|.+  +++.||||+++....  ....++.+|+.+++.++||||+++++++.+....+++++
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~   81 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence            4688889999999999999999  889999999875432  335778999999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccCceecCC
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE  217 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~~~  217 (241)
                      ++.+++|..++..     ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||.|+....
T Consensus        82 ~~~~~~l~~~~~~-----~~~~~~~~~~~~~~q~~~aL~~lH---~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~  153 (292)
T d1unla_          82 FCDQDLKKYFDSC-----NGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGI  153 (292)
T ss_dssp             CCSEEHHHHHHHT-----TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             ecccccccccccc-----ccccchhHHHHHHHHHHHHHHHhh---cCCEeeecccCcccccccCCceeeeecchhhcccC
Confidence            9998888877744     345889999999999999999999   99999999999999999999999999999998866


Q ss_pred             CCc
Q 026214          218 GGT  220 (241)
Q Consensus       218 ~~~  220 (241)
                      +..
T Consensus       154 ~~~  156 (292)
T d1unla_         154 PVR  156 (292)
T ss_dssp             CCS
T ss_pred             CCc
Confidence            543

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.98  E-value=5.1e-32  Score=224.00  Aligned_cols=168  Identities=14%  Similarity=0.101  Sum_probs=141.0

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCC-CceeeEeeEEecCCcceEEEe
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSH-DHILKLIGCCLETPIPILAFE  137 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv~e  137 (241)
                      .++|...++||+|+||.||+|.+  +++.||||.+....  ....+.+|++.+..+.| +|++.+++++......++|||
T Consensus         4 g~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme   81 (293)
T d1csna_           4 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID   81 (293)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred             CCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc--CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEE
Confidence            36788999999999999999998  78999999886543  34568889999999965 899999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcC-----CCcEEEccccCc
Q 026214          138 SVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNE-----ENVAKMFDFSLS  212 (241)
Q Consensus       138 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~-----~~~~ki~DfG~a  212 (241)
                      |+ +++|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.     .+.+||+|||+|
T Consensus        82 ~~-~~~l~~~~~~~----~~~~~~~~~~~i~~q~~~~l~~lH---~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a  153 (293)
T d1csna_          82 LL-GPSLEDLLDLC----GRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMV  153 (293)
T ss_dssp             CC-CCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTC
T ss_pred             ec-CCCHHHHHHhh----ccchhhHHHHHHHHHHHHHHHHHH---HCCceeccCCccceeecCcccccCCceEEccccee
Confidence            99 58999998765    346899999999999999999999   999999999999999964     578999999999


Q ss_pred             eecCCCCcccc----ceeecCCceeeeecC
Q 026214          213 ISIPEGGTSGA----KCLKSERTEICCVRE  238 (241)
Q Consensus       213 ~~~~~~~~~~~----~~~~~~~~~~~~~~e  238 (241)
                      +.+....+...    ....-.+|..|+|||
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE  183 (293)
T d1csna_         154 KFYRDPVTKQHIPYREKKNLSGTARYMSIN  183 (293)
T ss_dssp             EESBCTTTCCBCCCCCCCCCCSCTTTCCHH
T ss_pred             EEcccCccccceeecccCceEEchhhcCHH
Confidence            98865432211    112223677889998

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.3e-32  Score=227.13  Aligned_cols=167  Identities=19%  Similarity=0.192  Sum_probs=134.5

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--C-CeEEEEEEeeccC--CcchhhHHHHHHHHHhc---CCCceeeEeeEEec----
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--Q-ERLISVMRFRESN--RDGHGSCINNIVYAAQM---SHDHILKLIGCCLE----  128 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~-~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~----  128 (241)
                      .++|...+.||+|+||+||+|.+  + ++.||||++....  ......+.+|+.+++.|   +||||+++++++..    
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~   85 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   85 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence            36788899999999999999998  3 6789999987542  22345677888887776   79999999999853    


Q ss_pred             -CCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEc
Q 026214          129 -TPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMF  207 (241)
Q Consensus       129 -~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~  207 (241)
                       ....++++||+.++++......    ....+++..+..++.|++.||.|||   +.+|+||||||+|||++..+.+||+
T Consensus        86 ~~~~~~~~~e~~~~~~~~~~~~~----~~~~~~~~~~~~~~~qi~~aL~yLH---~~~ivHrDiKp~NILi~~~~~~kl~  158 (305)
T d1blxa_          86 RETKLTLVFEHVDQDLTTYLDKV----PEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLA  158 (305)
T ss_dssp             SEEEEEEEEECCSCBHHHHHHHS----CTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEEC
T ss_pred             cCceEEEEEEeccCCchhhhhhc----cCCCCCHHHHHHHHHHHHHHHHHHH---hCCEEecCCCccEEEEcCCCCeeec
Confidence             3468999999987655544433    2456899999999999999999999   9999999999999999999999999


Q ss_pred             cccCceecCCCCccccceeecCCceeeeecC
Q 026214          208 DFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       208 DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |||+++........    ....++..|+|||
T Consensus       159 dfg~~~~~~~~~~~----~~~~gT~~Y~APE  185 (305)
T d1blxa_         159 DFGLARIYSFQMAL----TSVVVTLWYRAPE  185 (305)
T ss_dssp             SCCSCCCCCGGGGG----CCCCCCCTTCCHH
T ss_pred             chhhhhhhcccccC----CCcccChhhcCcc
Confidence            99999865544322    2334567788998

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=9.8e-33  Score=231.19  Aligned_cols=167  Identities=16%  Similarity=0.136  Sum_probs=141.0

Q ss_pred             cCCCcCCeeecccceEEEEEEE-----CCeEEEEEEeeccC----CcchhhHHHHHHHHHhcCC-CceeeEeeEEecCCc
Q 026214           62 NNYDQKNVITEDWGCILYKGFW-----QERLISVMRFRESN----RDGHGSCINNIVYAAQMSH-DHILKLIGCCLETPI  131 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~  131 (241)
                      ++|...+.||+|+||+||+|.+     ++..||||.+....    ....+.+.+|+.++++++| |||+++++++.+...
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~  103 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  103 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc
Confidence            5588899999999999999987     57899999986532    2235678899999999966 899999999999999


Q ss_pred             ceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccC
Q 026214          132 PILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL  211 (241)
Q Consensus       132 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~  211 (241)
                      .++++||+.+|+|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+
T Consensus       104 ~~~v~e~~~~~~L~~~i~~~-----~~~~e~~~~~~~~Qi~~al~~lH---~~~ivHrDiKp~Nill~~~~~vkL~DFG~  175 (322)
T d1vzoa_         104 LHLILDYINGGELFTHLSQR-----ERFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGL  175 (322)
T ss_dssp             EEEEECCCCSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSSE
T ss_pred             eeeeeecccccHHHHHHHhc-----ccccHHHHHHHHHHHHHHHHHhh---cCCEEeccCCccceeecCCCCEEEeeccc
Confidence            99999999999999999765     34788899999999999999999   99999999999999999999999999999


Q ss_pred             ceecCCCCccccceeecCCceeeeecC
Q 026214          212 SISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       212 a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |+.+.........  ...++..|++||
T Consensus       176 a~~~~~~~~~~~~--~~~g~~~~~~pe  200 (322)
T d1vzoa_         176 SKEFVADETERAY--DFCGTIEYMAPD  200 (322)
T ss_dssp             EEECCGGGGGGGC--GGGSCCTTCCHH
T ss_pred             hhhhccccccccc--ccccccccchhH
Confidence            9987654433222  223444566666

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.97  E-value=3.8e-31  Score=219.16  Aligned_cols=167  Identities=17%  Similarity=0.150  Sum_probs=135.8

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCc-eeeEeeEEecCCcceEEEee
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDH-ILKLIGCCLETPIPILAFES  138 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~e~  138 (241)
                      ++|...+.||+|+||.||+|.+  +++.||||.+....  ...++..|+.+++.++|+| |+.+.+++.+.+..++||||
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~   84 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL   84 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCT--TSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred             CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhc--cCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEE
Confidence            5688999999999999999998  78999999887653  3456889999999997766 55556666778889999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcC---CCcEEEccccCceec
Q 026214          139 VEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNE---ENVAKMFDFSLSISI  215 (241)
Q Consensus       139 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~---~~~~ki~DfG~a~~~  215 (241)
                      +. ++|.+.+...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.   +..++|+|||+|+.+
T Consensus        85 ~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~  156 (299)
T d1ckia_          85 LG-PSLEDLFNFC----SRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY  156 (299)
T ss_dssp             CC-CBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEEC
T ss_pred             cC-Cchhhhhhhc----cCCCcHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHhhccccccCCCceeeeeccCcceec
Confidence            95 6887777654    456999999999999999999999   999999999999999853   557999999999988


Q ss_pred             CCCCcccc----ceeecCCceeeeecC
Q 026214          216 PEGGTSGA----KCLKSERTEICCVRE  238 (241)
Q Consensus       216 ~~~~~~~~----~~~~~~~~~~~~~~e  238 (241)
                      ....+...    ......++..|+|||
T Consensus       157 ~~~~~~~~~~~~~~~~~~gt~~y~aPE  183 (299)
T d1ckia_         157 RDARTHQHIPYRENKNLTGTARYASIN  183 (299)
T ss_dssp             BCTTTCCBCCCCBCCSCCCCSSSCCHH
T ss_pred             cccccccceeccccCCcCCCccccCHH
Confidence            76543321    112234667889998

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.3e-31  Score=223.92  Aligned_cols=163  Identities=16%  Similarity=0.198  Sum_probs=131.6

Q ss_pred             hcCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC--cchhhHHHHHHHHHhcCCCceeeEeeEEecC-----Cc
Q 026214           61 TNNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR--DGHGSCINNIVYAAQMSHDHILKLIGCCLET-----PI  131 (241)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~  131 (241)
                      .+.|...+.||+|+||+||+|.+  +++.||||++.....  ...+.+.+|+.+++.++|||++++++++...     ..
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~   96 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN   96 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCC
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCc
Confidence            45788899999999999999998  899999999976432  2345789999999999999999999998643     33


Q ss_pred             ceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccC
Q 026214          132 PILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL  211 (241)
Q Consensus       132 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~  211 (241)
                      .+++++++.+|+|.+++..      ..+++..+..++.||+.||.|||   +++|+||||||+|||++.++.+|++|||+
T Consensus        97 ~~~i~~~~~gg~L~~~~~~------~~l~e~~~~~i~~qil~aL~~LH---~~giiHrDiKp~NILi~~~~~~kl~dfg~  167 (348)
T d2gfsa1          97 DVYLVTHLMGADLNNIVKC------QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGL  167 (348)
T ss_dssp             CCEEEEECCSEEHHHHHTT------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCC--
T ss_pred             eEEEEEeecCCchhhhccc------ccccHHHHHHHHHHHHHHHHHHH---hCCCcccccCCccccccccccccccccch
Confidence            4666777889999999933      45999999999999999999999   99999999999999999999999999999


Q ss_pred             ceecCCCCccccceeecCCceeeeecC
Q 026214          212 SISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       212 a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      |.........      ..++..|++||
T Consensus       168 a~~~~~~~~~------~~g~~~y~apE  188 (348)
T d2gfsa1         168 ARHTDDEMTG------YVATRWYRAPE  188 (348)
T ss_dssp             --CCTGGGSS------SCHHHHTSCHH
T ss_pred             hcccCccccc------ccccccccCch
Confidence            9866443222      23344556665

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.9e-31  Score=224.21  Aligned_cols=162  Identities=17%  Similarity=0.197  Sum_probs=126.3

Q ss_pred             cCCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCC--cchhhHHHHHHHHHhcCCCceeeEeeEEecC------Cc
Q 026214           62 NNYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNR--DGHGSCINNIVYAAQMSHDHILKLIGCCLET------PI  131 (241)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~  131 (241)
                      +.|...++||+|+||+||+|.+  ++..||||++.....  .....+.+|+.+++.++||||+++++++...      ..
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~   96 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD   96 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred             CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCce
Confidence            5688889999999999999999  799999999976432  2345688999999999999999999999643      57


Q ss_pred             ceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEEEccccC
Q 026214          132 PILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL  211 (241)
Q Consensus       132 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~  211 (241)
                      +|+||||+.+ ++.+.+.       ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.++++|||+
T Consensus        97 ~~iv~Ey~~~-~l~~~~~-------~~~~~~~i~~~~~qil~gl~~LH---~~giiHrDlKP~Nil~~~~~~~kl~df~~  165 (355)
T d2b1pa1          97 VYLVMELMDA-NLCQVIQ-------MELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGL  165 (355)
T ss_dssp             EEEEEECCSE-EHHHHHT-------SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC
T ss_pred             eEEEEeccch-HHHHhhh-------cCCCHHHHHHHHHHHHHHHHHhh---hcccccccCCccccccccccceeeechhh
Confidence            8999999975 5666662       34899999999999999999999   99999999999999999999999999999


Q ss_pred             ceecCCCCccccceeecCCceeeeecC
Q 026214          212 SISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       212 a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                      ++.........    ...++..|+|||
T Consensus       166 ~~~~~~~~~~~----~~~~t~~y~aPE  188 (355)
T d2b1pa1         166 ARTAGTSFMMT----PYVVTRYYRAPE  188 (355)
T ss_dssp             -------------------CCTTCCHH
T ss_pred             hhccccccccc----cccccccccChh
Confidence            98766543222    223345678887

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.93  E-value=4.4e-26  Score=192.94  Aligned_cols=163  Identities=16%  Similarity=0.098  Sum_probs=125.5

Q ss_pred             CCCcCCeeecccceEEEEEEE--CCeEEEEEEeeccCCcchhhHHHHHHHHHhcC-----------CCceeeEeeEEecC
Q 026214           63 NYDQKNVITEDWGCILYKGFW--QERLISVMRFRESNRDGHGSCINNIVYAAQMS-----------HDHILKLIGCCLET  129 (241)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~~~~~~~  129 (241)
                      .|...++||+|+||+||+|.+  +++.||||++.... ...+.+.+|+.+++.++           |+||+++++++...
T Consensus        14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~-~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~   92 (362)
T d1q8ya_          14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK   92 (362)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred             cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc-cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeec
Confidence            488899999999999999998  89999999997643 23466788999888875           57899999888653


Q ss_pred             --CcceEEEeeCCCCC-HHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCC-CCeEEccCCCCCeeEcCCC---
Q 026214          130 --PIPILAFESVEYGN-LRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFP-RPIVYRDFKTAHILFNEEN---  202 (241)
Q Consensus       130 --~~~~lv~e~~~~gs-L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~-~~ivH~dlk~~Nill~~~~---  202 (241)
                        ...+++++++..+. ........   ....+++..+..++.|++.||.|||   + .+|+||||||+|||++.++   
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~~i~~qil~al~~lh---~~~~IvHrDlKp~NIll~~~~~~~  166 (362)
T d1q8ya_          93 GPNGVHVVMVFEVLGENLLALIKKY---EHRGIPLIYVKQISKQLLLGLDYMH---RRCGIIHTDIKPENVLMEIVDSPE  166 (362)
T ss_dssp             ETTEEEEEEEECCCCEEHHHHHHHT---TTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECSCCSGGGEEEEEEETTT
T ss_pred             cccceeeeeeecccccccccccccc---cccCCcHHHHHHHHHHHHHHHHHHh---hhcCcccccCChhHeeeeccCccc
Confidence              45566666655443 33333332   3566899999999999999999999   6 8999999999999997654   


Q ss_pred             ---cEEEccccCceecCCCCccccceeecCCceeeeecC
Q 026214          203 ---VAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVRE  238 (241)
Q Consensus       203 ---~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (241)
                         .++++|||.|.........      ..++..|+|||
T Consensus       167 ~~~~~kl~dfg~s~~~~~~~~~------~~gt~~y~aPE  199 (362)
T d1q8ya_         167 NLIQIKIADLGNACWYDEHYTN------SIQTREYRSPE  199 (362)
T ss_dssp             TEEEEEECCCTTCEETTBCCCS------CCSCGGGCCHH
T ss_pred             ccceeeEeeccccccccccccc------ccccccccChh
Confidence               4999999999876543322      23444677777

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.92  E-value=5.1e-25  Score=170.58  Aligned_cols=136  Identities=15%  Similarity=0.120  Sum_probs=106.1

Q ss_pred             CcCCeeecccceEEEEEEE-CCeEEEEEEeeccCCc------------------chhhHHHHHHHHHhcCCCceeeEeeE
Q 026214           65 DQKNVITEDWGCILYKGFW-QERLISVMRFRESNRD------------------GHGSCINNIVYAAQMSHDHILKLIGC  125 (241)
Q Consensus        65 ~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~------------------~~~~~~~E~~~l~~l~h~niv~l~~~  125 (241)
                      ..+++||+|+||.||+|.+ ++..||||.++.....                  ......+|...+.++.|++++..+++
T Consensus         3 ~vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~   82 (191)
T d1zara2           3 AIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAW   82 (191)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEE
T ss_pred             hhCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEe
Confidence            3568999999999999998 8999999987542110                  01234568889999999999988765


Q ss_pred             EecCCcceEEEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCeEEccCCCCCeeEcCCCcEE
Q 026214          126 CLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAK  205 (241)
Q Consensus       126 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlk~~Nill~~~~~~k  205 (241)
                      .    ..+++|||+++..+.+            ++......++.|++.+|.|||   ..+|+||||||+|||++++ .++
T Consensus        83 ~----~~~lvme~~~~~~~~~------------l~~~~~~~i~~ql~~~l~~lH---~~giiHrDiKP~NILv~~~-~~~  142 (191)
T d1zara2          83 E----GNAVLMELIDAKELYR------------VRVENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVLVSEE-GIW  142 (191)
T ss_dssp             E----TTEEEEECCCCEEGGG------------CCCSCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEETT-EEE
T ss_pred             c----CCEEEEEeeccccccc------------hhhHHHHHHHHHHHHHHHHHh---hCCEEEccCChhheeeeCC-CEE
Confidence            3    2479999998754432            233345678999999999999   9999999999999999865 488


Q ss_pred             EccccCceecCCCCc
Q 026214          206 MFDFSLSISIPEGGT  220 (241)
Q Consensus       206 i~DfG~a~~~~~~~~  220 (241)
                      |+|||.|.....+..
T Consensus       143 liDFG~a~~~~~~~~  157 (191)
T d1zara2         143 IIDFPQSVEVGEEGW  157 (191)
T ss_dssp             ECCCTTCEETTSTTH
T ss_pred             EEECCCcccCCCCCc
Confidence            999999988765543

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=99.04  E-value=9.5e-10  Score=87.15  Aligned_cols=150  Identities=11%  Similarity=-0.028  Sum_probs=99.3

Q ss_pred             HHHHHhcCCCcCCeeecccceEEEEEEECCeEEEEEEeeccCCcchhhHHHHHHHHHhcC-CCceeeEeeEEecCCcceE
Q 026214           56 ELKLATNNYDQKNVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQMS-HDHILKLIGCCLETPIPIL  134 (241)
Q Consensus        56 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~l  134 (241)
                      ++......|...+..+.++.+.||+...++..+.+|+...........+.+|...+..+. +--+.+++.+...++..++
T Consensus         8 ~l~~~~~~~~~~~~~~G~s~~~v~rv~~~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~l   87 (263)
T d1j7la_           8 ELKKLIEKYRCVKDTEGMSPAKVYKLVGENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNL   87 (263)
T ss_dssp             HHHHHHTTSEEEECSCCCSSSEEEEEECSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEE
T ss_pred             HHHHhhhceEEEEcCCCCCCCcEEEEEeCCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEE
Confidence            444444555444433334446899987778888899887665445566888998888773 4346778888888889999


Q ss_pred             EEeeCCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhCC---------------------------------
Q 026214          135 AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFG---------------------------------  181 (241)
Q Consensus       135 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---------------------------------  181 (241)
                      ||++++|.++.+.....       ...   ..++.++...+.-||+.                                 
T Consensus        88 v~~~l~G~~~~~~~~~~-------~~~---~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (263)
T d1j7la_          88 LMSEADGVLCSEEYEDE-------QSP---EKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCEN  157 (263)
T ss_dssp             EEECCSSEEHHHHTTTC-------SCH---HHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGG
T ss_pred             EEEeccccccccccccc-------ccH---HHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhc
Confidence            99999987776544111       111   12233333334444410                                 


Q ss_pred             -----------------------CCCCeEEccCCCCCeeEcCCCcEEEccccCceec
Q 026214          182 -----------------------FPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI  215 (241)
Q Consensus       182 -----------------------~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~~~  215 (241)
                                             ....++|+|+.|.|||+++++..-|+||+.+..-
T Consensus       158 ~~~~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~~g  214 (263)
T d1j7la_         158 WEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGRA  214 (263)
T ss_dssp             GSTTCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEEE
T ss_pred             ccccccchHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhcccC
Confidence                                   0123799999999999998777779999988653

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=98.35  E-value=1.7e-06  Score=67.45  Aligned_cols=73  Identities=8%  Similarity=-0.045  Sum_probs=50.8

Q ss_pred             eeecccc-eEEEEEEE-CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCC--CceeeEeeEEecCCcceEEEeeCCCCCH
Q 026214           69 VITEDWG-CILYKGFW-QERLISVMRFRESNRDGHGSCINNIVYAAQMSH--DHILKLIGCCLETPIPILAFESVEYGNL  144 (241)
Q Consensus        69 ~lg~G~~-g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~~~gsL  144 (241)
                      .+..|.. +.||+... .+..+.+|......   ...+..|...+..+..  -.+.+++.+..+++..+++|++++|.++
T Consensus        17 ~~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~---~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~   93 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA---LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL   93 (255)
T ss_dssp             ECSCTTSSCEEEEEECTTSCCEEEEEECSCT---TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred             EcCCcccCCeEEEEEeCCCCEEEEEeCCccC---HhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeecccc
Confidence            3444443 67899988 55567888755443   3456778888877743  3356778888888889999999987544

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=98.22  E-value=1.3e-05  Score=66.82  Aligned_cols=75  Identities=7%  Similarity=0.002  Sum_probs=48.9

Q ss_pred             CCeeecccceEEEEEEE--CCeEEEEEEeecc------C-CcchhhHHHHHHHHHhcC-C--CceeeEeeEEecCCcceE
Q 026214           67 KNVITEDWGCILYKGFW--QERLISVMRFRES------N-RDGHGSCINNIVYAAQMS-H--DHILKLIGCCLETPIPIL  134 (241)
Q Consensus        67 ~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------~-~~~~~~~~~E~~~l~~l~-h--~niv~l~~~~~~~~~~~l  134 (241)
                      .+.||.|....||++..  .++.+++|.-.+.      . .....+...|...+..+. +  ..+++++.+  ++...++
T Consensus        31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~~~~l  108 (392)
T d2pula1          31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT  108 (392)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred             EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cCCCCEE
Confidence            35789999999999987  4678999865431      1 112345667888887762 2  335555543  4556789


Q ss_pred             EEeeCCCCC
Q 026214          135 AFESVEYGN  143 (241)
Q Consensus       135 v~e~~~~gs  143 (241)
                      +||++.+.+
T Consensus       109 vmE~L~~~~  117 (392)
T d2pula1         109 VMEDLSHLK  117 (392)
T ss_dssp             EECCCTTSE
T ss_pred             EEeccCCcc
Confidence            999997643

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.39  E-value=0.00025  Score=56.63  Aligned_cols=160  Identities=12%  Similarity=0.075  Sum_probs=83.8

Q ss_pred             cCHHHHHHHhcCCCcCCeee-----cccceEEEEEEECCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCce--eeEee
Q 026214           52 FSAQELKLATNNYDQKNVIT-----EDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHI--LKLIG  124 (241)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~lg-----~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni--v~l~~  124 (241)
                      ++.+|+......|..++...     .|.--+.|....++..+++|++....  ....+..|+.++..|...++  +..+-
T Consensus         3 ls~~el~~~l~~Y~lg~~~~~~~i~~G~~N~ny~v~t~~g~yVLri~~~~~--~~~~l~~~~~~l~~L~~~g~pvp~pi~   80 (316)
T d2ppqa1           3 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKDPLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPLP   80 (316)
T ss_dssp             CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSCCEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCC
T ss_pred             CCHHHHHHHHHhCCCCCceEeecCCCCcccCeEEEEECCCcEEEEEcCCCC--CHHHHHHHHHHHHhhhhccccccccce
Confidence            56788888888898765543     45446678888866679999886542  23445556777777743222  11111


Q ss_pred             ------EEecCCcceEEEeeCCCCCHH-----H---------HHhhcCC----CCCCCCCHH------------------
Q 026214          125 ------CCLETPIPILAFESVEYGNLR-----D---------RILSASQ----PQTEPLLMK------------------  162 (241)
Q Consensus       125 ------~~~~~~~~~lv~e~~~~gsL~-----~---------~l~~~~~----~~~~~l~~~------------------  162 (241)
                            +.........++.++.+....     .         .++....    .........                  
T Consensus        81 ~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (316)
T d2ppqa1          81 RKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEK  160 (316)
T ss_dssp             BTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTST
T ss_pred             ecCCCcceeeecccceeeeecccccccccchhHHHHHHHHHHhhhhhhhhcccccccccchhhcchhhhHHHHhhhhcch
Confidence                  111133445556665542211     1         1110000    000000100                  


Q ss_pred             HHHHHHHHHHHHHHHHh-CCCCCCeEEccCCCCCeeEcCCCcEEEccccCce
Q 026214          163 HRLKIAMDIAHALAYLH-FGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSI  213 (241)
Q Consensus       163 ~~~~i~~~i~~~l~~lH-~~~~~~ivH~dlk~~Nill~~~~~~ki~DfG~a~  213 (241)
                      .....+......+.-.. ..-..++||+|+.+.||+++.+...-|.||+.|.
T Consensus       161 ~~~~~l~~~~~~~~~~~~~~L~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~  212 (316)
T d2ppqa1         161 GLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC  212 (316)
T ss_dssp             THHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             hHHHHHHHHHHhhhccCccccccccccCCcchhhhhcccccceeEecccccc
Confidence            01111222222223222 1224579999999999999988878899999875

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=97.27  E-value=0.00088  Score=53.78  Aligned_cols=136  Identities=13%  Similarity=0.092  Sum_probs=76.6

Q ss_pred             eEEEEEEE-CCeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCce--eeEe-----eEEecCCcceEEEeeCCCCCH---
Q 026214           76 CILYKGFW-QERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHI--LKLI-----GCCLETPIPILAFESVEYGNL---  144 (241)
Q Consensus        76 g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni--v~l~-----~~~~~~~~~~lv~e~~~~gsL---  144 (241)
                      -.||++.. +|..+++|..++.. ....++..|...+..|...++  +..+     ......+..+.++++++|..+   
T Consensus        36 N~vy~v~~~dg~~~VlK~~rp~~-~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~~~~~~  114 (325)
T d1zyla1          36 NRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQFEAD  114 (325)
T ss_dssp             SEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCEECCSS
T ss_pred             ceeEEEEcCCCCEEEEEEeCCCC-CCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCcCCCCC
Confidence            47999988 88889999887653 345667888888888743222  2111     112335567888998875321   


Q ss_pred             --HH------HH---hh----cCCCCCCCCCHH----------------------HHHHHHHHHHHHHHHH-hCCCCCCe
Q 026214          145 --RD------RI---LS----ASQPQTEPLLMK----------------------HRLKIAMDIAHALAYL-HFGFPRPI  186 (241)
Q Consensus       145 --~~------~l---~~----~~~~~~~~l~~~----------------------~~~~i~~~i~~~l~~l-H~~~~~~i  186 (241)
                        ..      .+   +.    ........+++.                      .....+..+...+.-. ......++
T Consensus       115 ~~~~~~~lG~~LA~lH~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~p~~l  194 (325)
T d1zyla1         115 NIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWREDFTVLR  194 (325)
T ss_dssp             CHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCEE
T ss_pred             CHHHHHHHHHHHHHHHhhcccCCccccCCCCHHHHhhhhHHHHHHcCcCCHHHHHHHHHHHHHHHHHHHHhccccCCcee
Confidence              11      11   11    000011112211                      1122233333333322 12224578


Q ss_pred             EEccCCCCCeeEcCCCcEEEccccCcee
Q 026214          187 VYRDFKTAHILFNEENVAKMFDFSLSIS  214 (241)
Q Consensus       187 vH~dlk~~Nill~~~~~~ki~DfG~a~~  214 (241)
                      +|+|+.+.|||++++  ..++||+-+..
T Consensus       195 iHgDlh~~NvL~~~~--~~~IDFdd~~~  220 (325)
T d1zyla1         195 LHGDCHAGNILWRDG--PMFVDLDDARN  220 (325)
T ss_dssp             CCSSCSGGGEEESSS--EEECCCTTCCE
T ss_pred             ecCCCCcccEEEeCC--ceEEechhccc
Confidence            999999999999743  45899998864

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.75  E-value=0.0037  Score=51.33  Aligned_cols=70  Identities=13%  Similarity=0.071  Sum_probs=44.6

Q ss_pred             CeeecccceEEEEEEE-C--------CeEEEEEEeeccCCcchhhHHHHHHHHHhcCCCce-eeEeeEEecCCcceEEEe
Q 026214           68 NVITEDWGCILYKGFW-Q--------ERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHI-LKLIGCCLETPIPILAFE  137 (241)
Q Consensus        68 ~~lg~G~~g~Vy~~~~-~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e  137 (241)
                      +.|+.|-.=.+|++.. +        ...|.+++.- .. ...-...+|..+++.+.-.++ +++++++..    .+|+|
T Consensus        48 ~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g-~~-~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~----g~I~e  121 (395)
T d1nw1a_          48 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYF-NP-ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEE  121 (395)
T ss_dssp             EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEEC-SC-CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEEC
T ss_pred             EEcCCccccceEEEEeCCCCccccCCCCcEEEEecC-Cc-chhhHHHHHHHHHHHHHhCCCCCeEEEEcCC----ceEEE
Confidence            4677787788999987 2        2345665544 32 233345688888888843344 466666532    57899


Q ss_pred             eCCCCC
Q 026214          138 SVEYGN  143 (241)
Q Consensus       138 ~~~~gs  143 (241)
                      |++|.+
T Consensus       122 fi~g~~  127 (395)
T d1nw1a_         122 YIPSRP  127 (395)
T ss_dssp             CCCEEE
T ss_pred             Eecccc
Confidence            998643