Citrus Sinensis ID: 026217

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-
Protein Sequence
MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVATE
Secondary Structure (PSIPRED)
cccccEEEEEcccccEEcccccccHHHHHcccccccHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHHcccEEEcccccccHHHHHHHHcccccEEEEcccccHHHHHHHHHHHccccEEEEccccccccccccccccHHHHHHccEEEEEEEcccccccHHHHHHHHHHHHHcccEEEEEEHHHccccHHHHHHHccccccccEEEEEEccc
Secondary Structure Prediction (SSPRO)
ccccEEEEEEcccccEEcccccccHHHHHHHcccccHHHHHcHHHccccccccEEEEEEcccHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHccccHHEcccccccHHHHHHHHcccccEEEEEcccHHHHHHHHHHHcccccEEEEHHHEcccccccccccHHHHHHHHHHEEcEEEEccHHHHHHHHHHHHHHHHHcccEEEEEEHHHHHHHcHHHHHHHHccccccEEEEEEccc
Coil and Loop (DISEMBL)
mtgweeyslvtaprlfkiqhtdmplsyytgilgmpgmtayagffevcspkqgeYVFVSAASGAVGQLVGQFAKLVGCYVvgsagskdkVDLLKnkfgfdeafnykeepdlDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMIsqynndkpegvhnLTCLISKrirmegflvpdyfhlYPKFLEMMIprikegkivyvedkaeglesaPAALVGLFSGRNVGKQVVEVATE
Flexible Loop (DISEMBL)
MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGsagskdkvdLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVATE
Low Complexity Region (SEG)
MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVATE
Disordered region (IsUnstruct)
***WEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGK********
Disordered Region (DISOPRED)
MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVA**
Disordered Region (DISEMBL)
MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVATE
Disordered Region (DISPRO)
*TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVAT*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVATE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	241	2.2.26 [Sep-21-2011]
Q6WAU0	342	(+)-pulegone reductase OS	N/A	no	0.995	0.701	0.742	1e-106
Q39173	343	NADP-dependent alkenal do	yes	no	1.0	0.702	0.753	1e-104
Q39172	345	NADP-dependent alkenal do	no	no	1.0	0.698	0.732	1e-101
Q9C0Y6	349	Zinc-type alcohol dehydro	yes	no	0.991	0.684	0.471	3e-55
O34812	339	Putative NADP-dependent o	yes	no	0.979	0.696	0.439	2e-50
P97584	329	Prostaglandin reductase 1	yes	no	0.979	0.717	0.446	5e-48
Q91YR9	329	Prostaglandin reductase 1	yes	no	0.975	0.714	0.452	7e-48
Q3SZJ4	329	Prostaglandin reductase 1	yes	no	0.975	0.714	0.439	4e-47
P76113	345	NADPH-dependent curcumin	N/A	no	0.991	0.692	0.410	2e-46
Q9EQZ5	329	Prostaglandin reductase 1	yes	no	0.966	0.708	0.448	9e-46

>sp|Q6WAU0|PULR_MENPI (+)-pulegone reductase OS=Mentha piperita PE=1 SV=1

 Score =  383 bits (984), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 179/241 (74%), Positives = 213/241 (88%), Gaps = 1/241 (0%)

Query: 2   TGWEEYSLVTAP-RLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAA 60
            GWEEY+L+  P  LFKIQ  D+PLSYY GILGMPGMTAYAGFFE+CSPK+GE VFV+AA
Sbjct: 102 AGWEEYTLIQNPYNLFKIQDKDVPLSYYVGILGMPGMTAYAGFFEICSPKKGETVFVTAA 161

Query: 61  SGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE 120
           +G+VGQLVGQFAK+ GCYVVGSAGSK+KVDLLKNKFGFD+AFNYKEE D D ALKR+FPE
Sbjct: 162 AGSVGQLVGQFAKMFGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEESDYDTALKRHFPE 221

Query: 121 GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGF 180
           GI+IYF+NVGGKML+AV+ NMR+ GRI +CGM+SQY+  +PEGVHNL  LI K+IRM+GF
Sbjct: 222 GIDIYFDNVGGKMLEAVINNMRVHGRIAVCGMVSQYSLKQPEGVHNLLKLIPKQIRMQGF 281

Query: 181 LVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVAT 240
           +V DY+HLYPKFLEM++PRIKEGK+ YVED +EGLESAP+AL+G++ GRNVG QVV V+ 
Sbjct: 282 VVVDYYHLYPKFLEMVLPRIKEGKVTYVEDISEGLESAPSALLGVYVGRNVGNQVVAVSR 341

Query: 241 E 241
           E
Sbjct: 342 E 342

Monoterpene synthase that catalyzes the specific reduction of the 4,8-double bond of (+)-pulegone to produce both (-)-menthone and (+)-isomenthone in a 70:30 ratio. Unable to utilize either (-)-isopiperitenone or (+)-cis-isopulegone, or to catalyze the reverse reaction with (-)-menthone or (+)-isomenthone. Has an absolute requirement for NADPH.
Mentha piperita (taxid: 34256)
EC: 1EC: .EC: 3EC: .EC: 1EC: .EC: 8EC: 1

>sp|Q39173|P2_ARATH NADP-dependent alkenal double bond reductase P2 OS=Arabidopsis thaliana GN=P2 PE=2 SV=2

 Score =  379 bits (972), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 183/243 (75%), Positives = 213/243 (87%), Gaps = 2/243 (0%)

Query: 1   MTGWEEYSLVT--APRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVS 58
           + GWEEYS++T  A   FKIQHTD+PLSYYTG+LGMPGMTAYAGF+EVCSPK+GE V+VS
Sbjct: 101 IVGWEEYSVITPMAHMHFKIQHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKKGETVYVS 160

Query: 59  AASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYF 118
           AASGAVGQLVGQFAK++GCYVVGSAGSK+KVDLLK KFGFD+AFNYKEE DL AALKR F
Sbjct: 161 AASGAVGQLVGQFAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCF 220

Query: 119 PEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRME 178
           P+GI++YFENVGGKMLDAVLLNM   GRI +CGMISQYN +  EGVHNL+ +I KRIR++
Sbjct: 221 PKGIDMYFENVGGKMLDAVLLNMNPHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIRIQ 280

Query: 179 GFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 238
           GF+V D++  YPKFLE+++PRIKEGKI YVED A+GLE AP ALVGLF G+NVGKQVV +
Sbjct: 281 GFVVADFYDKYPKFLELVLPRIKEGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVI 340

Query: 239 ATE 241
           A E
Sbjct: 341 ARE 343

Catalyzes the reduction of the 7-8 double bond of phenylpropanal substrates, such as p-coumaryl aldehyde and coniferyl aldehyde (in vitro). Has activity towards toxic substrates, such as 4-hydroxy-(2E)-nonenal (in vitro) (By similarity). May play a distinct role in plant antioxidant defense and is possibly involved in NAD(P)/NAD(P)h homeostasis.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|Q39172|P1_ARATH NADP-dependent alkenal double bond reductase P1 OS=Arabidopsis thaliana GN=P1 PE=1 SV=1

 Score =  369 bits (947), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 178/243 (73%), Positives = 207/243 (85%), Gaps = 2/243 (0%)

Query: 1   MTGWEEYSLVT--APRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVS 58
           +  WEEYS++T      FKIQHTD+PLSYYTG+LGMPGMTAYAGF+EVCSPK+GE V+VS
Sbjct: 103 IVAWEEYSVITPMTHAHFKIQHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVS 162

Query: 59  AASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYF 118
           AASGAVGQLVGQ AK++GCYVVGSAGSK+KVDLLK KFGFD+AFNYKEE DL AALKR F
Sbjct: 163 AASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCF 222

Query: 119 PEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRME 178
           P GI+IYFENVGGKMLDAVL+NM + GRI +CGMISQYN +  EGVHNL+ +I KRIR++
Sbjct: 223 PNGIDIYFENVGGKMLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIRIQ 282

Query: 179 GFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 238
           GF+V D++  Y KFLE ++P I+EGKI YVED A+GLE AP ALVGLF G+NVGKQVV V
Sbjct: 283 GFVVSDFYDKYSKFLEFVLPHIREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVV 342

Query: 239 ATE 241
           A E
Sbjct: 343 ARE 345

Catalyzes the reduction of the 7-8 double bond of phenylpropanal substrates, such as p-coumaryl aldehyde and coniferyl aldehyde (in vitro). Has activity towards toxic substrates, such as 4-hydroxy-(2E)-nonenal (in vitro). May play a distinct role in plant antioxidant defense and is possibly involved in NAD(P)/NAD(P)H homeostasis.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|Q9C0Y6|YKM8_SCHPO Zinc-type alcohol dehydrogenase-like protein PB24D3.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAPB24D3.08c PE=3 SV=1

 Score =  214 bits (546), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 116/246 (47%), Positives = 157/246 (63%), Gaps = 7/246 (2%)

Query: 1   MTGWEEYSLVTAPRLFKIQHTD----MPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVF 56
           ++GWEEY+ V+   L  +Q  +    +PL  + G LGMP  TAY G   +  PK GE ++
Sbjct: 106 VSGWEEYTFVSKQALGFLQPINNPYKLPLIDFVGSLGMPSQTAYCGLKHIGKPKAGETIY 165

Query: 57  VSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKR 116
           +SAASGAVGQ+ GQ AK +G +VVGS GS +K  +  +  G+D  FNYK+E    A L R
Sbjct: 166 ISAASGAVGQMAGQLAKAMGLHVVGSVGSDEKFKICLDS-GYDSVFNYKKESPFKA-LPR 223

Query: 117 YFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIR 176
             P+GI+IYFENVGG+ +DAVL NM +QGRI  CG ISQYNN  P  V NL  ++ K + 
Sbjct: 224 LCPKGIDIYFENVGGETMDAVLENMNLQGRIIFCGAISQYNNPNPYRVKNLGMVLVKSLT 283

Query: 177 MEGFLVPDYFHLYP-KFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQV 235
           ++GF+V +    Y  ++ E M   I EGKI Y  D  +GLESAP A +G+  G+N GK +
Sbjct: 284 IQGFIVANILPQYQEQYFEEMPKLIAEGKIKYKCDVYDGLESAPEAFIGMLQGKNSGKTI 343

Query: 236 VEVATE 241
           V++A E
Sbjct: 344 VKIADE 349

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|O34812|YFMJ_BACSU Putative NADP-dependent oxidoreductase YfmJ OS=Bacillus subtilis (strain 168) GN=yfmJ PE=2 SV=1

 Score =  198 bits (504), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 105/239 (43%), Positives = 146/239 (61%), Gaps = 3/239 (1%)

Query: 4   WEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGA 63
           W+E+S V+   L KI  +  P S Y GILGM G+TAY G  ++  PK+GE V VS A+GA
Sbjct: 98  WQEFSAVSESALRKIDTSLAPASAYLGILGMTGLTAYFGLLDIGRPKEGETVVVSGAAGA 157

Query: 64  VGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGIN 123
           VG  VGQ AK+ G  VVG AGS +K+D LK +  FDEA NYK   D+  AL+   P+G++
Sbjct: 158 VGSTVGQIAKIKGARVVGIAGSDEKIDYLKQELQFDEAINYKTADDIQKALQNACPDGVD 217

Query: 124 IYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPE---GVHNLTCLISKRIRMEGF 180
           +YF+NVGG + DAV+  +    RI +CG IS YN +      G    + LI  +  M+GF
Sbjct: 218 VYFDNVGGPISDAVMNLLNEFARIPVCGAISSYNAESEADDMGPRVQSKLIKTKSLMQGF 277

Query: 181 LVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVA 239
           +V DY   + +  + +   +K GK+ Y E   EG E+ P A +GLF G N GKQ+++V+
Sbjct: 278 IVSDYSDRFSEGAKQLAEWLKAGKLHYEETITEGFENIPDAFLGLFKGENKGKQLIKVS 336

Putative quinone oxidoreductase that may contribute to the degradation of aromatic compounds.

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|P97584|PTGR1_RAT Prostaglandin reductase 1 OS=Rattus norvegicus GN=Ptgr1 PE=2 SV=3

 Score =  191 bits (484), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 108/242 (44%), Positives = 148/242 (61%), Gaps = 6/242 (2%)

Query: 1   MTGWEEYSLVTAPRLFKIQH---TDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFV 57
           + GW  +S+     L K+       +PLS   G +GMPG+TAY G  ++C  K GE V V
Sbjct: 88  LLGWTSHSISDGNGLRKLPAEWPDKLPLSLALGTVGMPGLTAYFGLLDICGLKGGETVLV 147

Query: 58  SAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRY 117
           +AA+GAVG +VGQ AKL GC VVG+AGS +KV  LK K GFD AFNYK    L+ AL+  
Sbjct: 148 NAAAGAVGSVVGQIAKLKGCKVVGTAGSDEKVAYLK-KLGFDVAFNYKTVKSLEEALRTA 206

Query: 118 FPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKP-EGVHNLTCLISKRIR 176
            P+G + YF+NVGG+  + V+L M+  GRI +CG ISQYN   P     +   +I +++R
Sbjct: 207 SPDGYDCYFDNVGGEFSNTVILQMKTFGRIAICGAISQYNRTGPCPPGPSPEVIIYQQLR 266

Query: 177 MEGFLVPDYF-HLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQV 235
           MEGF+V  +   +  K L  ++  + EGKI Y E   EG E  PAA +G+  G N+GK +
Sbjct: 267 MEGFIVTRWQGEVRQKALTDLMNWVSEGKIRYHEYITEGFEKMPAAFMGMLKGDNLGKTI 326

Query: 236 VE 237
           V+
Sbjct: 327 VK 328

Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Has no activity towards PGE1, PGE2 and PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|Q91YR9|PTGR1_MOUSE Prostaglandin reductase 1 OS=Mus musculus GN=Ptgr1 PE=2 SV=2

 Score =  190 bits (483), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 110/243 (45%), Positives = 151/243 (62%), Gaps = 8/243 (3%)

Query: 1   MTGWEEYSLVTAPRLFK--IQHTD-MPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFV 57
           + GW  +S+     L K  ++  D +PLS   G +GMPG+TAY G  ++C  K GE V V
Sbjct: 88  LLGWTSHSISDGNGLTKLPVEWPDKLPLSLALGTVGMPGLTAYFGLLDICGVKGGETVMV 147

Query: 58  SAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRY 117
           SAA+GAVG +VGQ AKL GC VVG+AGS +KV  LK K GFD AFNYK    L+ AL+  
Sbjct: 148 SAAAGAVGSVVGQIAKLKGCKVVGTAGSDEKVAYLK-KLGFDVAFNYKTVKSLEEALRTA 206

Query: 118 FPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDK--PEGVHNLTCLISKRI 175
            P+G + YF+NVGG+  +AV+L M+  GRI +CG ISQYN     P+G      +I +++
Sbjct: 207 SPDGYDCYFDNVGGEFSNAVILQMKTFGRIAICGAISQYNRTGPCPQGPAP-EVVIYQQL 265

Query: 176 RMEGFLVPDYF-HLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQ 234
           RMEGF+V  +   +  K L  ++  + EGK+   E   EG E  PAA +G+  G N+GK 
Sbjct: 266 RMEGFIVNRWQGEVRQKALTELMNWVSEGKVQCHEYVTEGFEKMPAAFMGMLKGENLGKT 325

Query: 235 VVE 237
           +V+
Sbjct: 326 IVK 328

Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Has no activity towards PGE1, PGE2 and PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|Q3SZJ4|PTGR1_BOVIN Prostaglandin reductase 1 OS=Bos taurus GN=PTGR1 PE=2 SV=1

 Score =  188 bits (477), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 106/241 (43%), Positives = 144/241 (59%), Gaps = 6/241 (2%)

Query: 2   TGWEEYSLVTAPRLFKI---QHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVS 58
           +GW  +S+    +L K+       +PLS   G +GMPG+TAY G  ++C  K GE V VS
Sbjct: 89  SGWTTHSISNGEKLEKVLAEWPDTLPLSLALGTVGMPGLTAYFGLLDICGVKGGETVLVS 148

Query: 59  AASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYF 118
           AA+GAVG +VGQ AKL GC VVG+AGS +KV  LK K GFD A NYK    L+ ALK   
Sbjct: 149 AAAGAVGSIVGQIAKLKGCKVVGTAGSDEKVAWLK-KHGFDVALNYKTVKSLEEALKEAA 207

Query: 119 PEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGV-HNLTCLISKRIRM 177
           PEG + YF+NVGG+  +  +  M+  GRI +CG IS YN   P     +   +I K + +
Sbjct: 208 PEGYDCYFDNVGGEFSNVAITQMKKFGRIAICGAISVYNRTSPLSPGPSPEIIIFKELHL 267

Query: 178 EGFLVPDYF-HLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVV 236
           +GF+V  +   +  K L  ++  + EGKI Y E   EG E+ PAA +GL  G N+GK +V
Sbjct: 268 QGFVVYRWQGEVRQKALRDLLKWVSEGKIQYHEHVTEGFENMPAAFIGLLKGENLGKAIV 327

Query: 237 E 237
           +
Sbjct: 328 K 328

Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Has no activity towards PGE1, PGE2 and PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|P76113|CURA_ECOLI NADPH-dependent curcumin reductase OS=Escherichia coli (strain K12) GN=curA PE=1 SV=3

 Score =  186 bits (471), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 101/246 (41%), Positives = 144/246 (58%), Gaps = 7/246 (2%)

Query: 2   TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAAS 61
           +GW++Y + +   L K+       S+  G+LGMPG TAY G  ++  PK+GE + V+AA+
Sbjct: 100 SGWQDYDISSGDDLVKLGDHPQNPSWSLGVLGMPGFTAYMGLLDIGQPKEGETLVVAAAT 159

Query: 62  GAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEG 121
           G VG  VGQ  KL GC VVG AG  +K        GFD   ++  + D    L +  P+G
Sbjct: 160 GPVGATVGQIGKLKGCRVVGVAGGAEKCRHATEVLGFDVCLDHHAD-DFAEQLAKACPKG 218

Query: 122 INIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYN-NDKPEGVHNLTCLIS----KRIR 176
           I+IY+ENVGGK+ DAVL  +    RI +CG++S YN  + P G   L  L++    KRIR
Sbjct: 219 IDIYYENVGGKVFDAVLPLLNTSARIPVCGLVSSYNATELPPGPDRLPLLMATVLKKRIR 278

Query: 177 MEGFLVP-DYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQV 235
           ++GF++  DY H   +F   M   +KE KI Y E+  +GLE+AP   +GL  G+N GK V
Sbjct: 279 LQGFIIAQDYGHRIHEFQREMGQWVKEDKIHYREEITDGLENAPQTFIGLLKGKNFGKVV 338

Query: 236 VEVATE 241
           + VA +
Sbjct: 339 IRVAGD 344

Catalyzes the metal-independent reduction of curcumin to dihydrocurcumin (DHC) as an intermediate product, followed by further reduction to tetrahydrocurcumin (THC) as an end product. It also acts on 3-octene-2-one, 3-hepten-2-one, resveratrol, and trans-2-octenal.

Escherichia coli (strain K12) (taxid: 83333)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: n

EC: 3

>sp|Q9EQZ5|PTGR1_CAVPO Prostaglandin reductase 1 OS=Cavia porcellus GN=Ptgr1 PE=1 SV=1

 Score =  183 bits (465), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 108/241 (44%), Positives = 149/241 (61%), Gaps = 8/241 (3%)

Query: 2   TGWEEYSLVTAPRLFKI---QHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVS 58
           +GW  + +     L K+       +PLS   G +GMPG+TAY G  EVC  K GE V VS
Sbjct: 89  SGWTTHFISDGKGLEKLLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVS 148

Query: 59  AASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYF 118
           AA+GAVG +VGQ AKL GC VVG+AGS +K+  LK + GFD AFNYK    L+ ALK+  
Sbjct: 149 AAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK-QIGFDAAFNYKTVNSLEEALKKAS 207

Query: 119 PEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYN--NDKPEGVHNLTCLISKRIR 176
           P+G + YF+NVGG+ L+ VL  M+  G+I +CG IS YN  +  P G  +   +I K++R
Sbjct: 208 PDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPG-PSPESIIYKQLR 266

Query: 177 MEGFLVPDYF-HLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQV 235
           +EGF+V  +   +  K L  ++  + EGKI Y E   +G E+ PAA + + +G N+GK V
Sbjct: 267 IEGFIVYRWQGDVREKALRDLMKWVLEGKIQYHEHVTKGFENMPAAFIEMLNGANLGKAV 326

Query: 236 V 236
           V
Sbjct: 327 V 327

Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4.

Cavia porcellus (taxid: 10141)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	241
308943732	347	alcohol dehydrogenase [Camellia sinensis	0.995	0.691	0.813	1e-112
225434189	345	PREDICTED: NADP-dependent alkenal double	1.0	0.698	0.805	1e-112
255577891	345	alcohol dehydrogenase, putative [Ricinus	0.995	0.695	0.804	1e-112
224117858	348	predicted protein [Populus trichocarpa]	1.0	0.692	0.793	1e-111
444302246	351	Chain A, X-ray Crystal Structure Of A Do	1.0	0.686	0.805	1e-110
6692816	343	allyl alcohol dehydrogenase [Nicotiana t	1.0	0.702	0.805	1e-110
224117874	348	predicted protein [Populus trichocarpa]	1.0	0.692	0.789	1e-109
224092856	345	predicted protein [Populus trichocarpa]	0.995	0.695	0.780	1e-109
225434197	345	PREDICTED: NADP-dependent alkenal double	0.995	0.695	0.796	1e-109
342898881	352	ketone/zingerone synthase 2 [Rubus idaeu	0.995	0.681	0.781	1e-108

>gi|308943732|gb|ADO51748.1| alcohol dehydrogenase [Camellia sinensis]

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 196/241 (81%), Positives = 221/241 (91%), Gaps = 1/241 (0%)

Query: 2   TGWEEYSLVTAP-RLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAA 60
           TGWEEY+++T P  +FKIQ+TD+PLSYYTGILGM GMTAY GF+E+CSPKQG+YVF+SAA
Sbjct: 107 TGWEEYTIITEPANVFKIQNTDVPLSYYTGILGMHGMTAYVGFYEICSPKQGDYVFISAA 166

Query: 61  SGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE 120
           SGAVGQLVGQFAKL+GCYVVGSAG+K+KVDLLKNKFGFDEAFNYKEE DL+AALKRYFP 
Sbjct: 167 SGAVGQLVGQFAKLLGCYVVGSAGTKEKVDLLKNKFGFDEAFNYKEEKDLEAALKRYFPN 226

Query: 121 GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGF 180
           GINIYFENVGGKMLDAVL NMR+  RI +CGMISQYN ++PEGVHNL CLI+KR+RMEGF
Sbjct: 227 GINIYFENVGGKMLDAVLANMRLHSRIAVCGMISQYNLERPEGVHNLFCLITKRVRMEGF 286

Query: 181 LVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVAT 240
           +V DY+HLYPKFLEM++P IK GKI YVED AEGLESAPAAL+GLFSGRNVGKQVV VA 
Sbjct: 287 IVFDYYHLYPKFLEMILPCIKGGKITYVEDVAEGLESAPAALIGLFSGRNVGKQVVVVAR 346

Query: 241 E 241
           E
Sbjct: 347 E 347

Source: Camellia sinensis

Species: Camellia sinensis

Genus: Camellia

Family: Theaceae

Order: Ericales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225434189|ref|XP_002279359.1| PREDICTED: NADP-dependent alkenal double bond reductase P2 [Vitis vinifera] gi|147792339|emb|CAN61471.1| hypothetical protein VITISV_043825 [Vitis vinifera]

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 195/242 (80%), Positives = 224/242 (92%), Gaps = 1/242 (0%)

Query: 1   MTGWEEYSLVTA-PRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSA 59
           +TGWEEYSL+T   RLFKIQHTD+PLSYYTGILGM GMTAY+GF+E+CSPK+GEYVF+SA
Sbjct: 104 ITGWEEYSLITTDERLFKIQHTDVPLSYYTGILGMAGMTAYSGFYEICSPKKGEYVFISA 163

Query: 60  ASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFP 119
           ASGAVGQLVGQFAKL+GCYVVGSAG+K+KVDLLKNKFGFDEAFNYKEE DL+A LKRYFP
Sbjct: 164 ASGAVGQLVGQFAKLLGCYVVGSAGTKEKVDLLKNKFGFDEAFNYKEEQDLEACLKRYFP 223

Query: 120 EGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEG 179
           EGI+IYFENVGGKMLDAVL+NMR+ GRI +CGMISQYN ++PEGV NL  +++KRIRMEG
Sbjct: 224 EGIDIYFENVGGKMLDAVLVNMRLHGRIAVCGMISQYNLEEPEGVRNLFTIVTKRIRMEG 283

Query: 180 FLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVA 239
           FLV DY+HLYPKFL++++P I+EGKIVYVED AEGLESAP AL+GL+SGRNVGKQVV VA
Sbjct: 284 FLVFDYYHLYPKFLDLIMPYIREGKIVYVEDIAEGLESAPTALIGLYSGRNVGKQVVVVA 343

Query: 240 TE 241
            E
Sbjct: 344 RE 345

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255577891|ref|XP_002529818.1| alcohol dehydrogenase, putative [Ricinus communis] gi|223530695|gb|EEF32567.1| alcohol dehydrogenase, putative [Ricinus communis]

 Score =  409 bits (1052), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 194/241 (80%), Positives = 222/241 (92%), Gaps = 1/241 (0%)

Query: 2   TGWEEYSLVTAPRLF-KIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAA 60
           TGWEEYS++ +P+L  KI+HTD+PLSYYTGILGM G+TAYAGFFEVCSPK+GE+V+VSAA
Sbjct: 105 TGWEEYSVIVSPKLLIKIEHTDLPLSYYTGILGMHGVTAYAGFFEVCSPKKGEFVYVSAA 164

Query: 61  SGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE 120
           SGAVGQLVGQFAK+ GCYVVGSAGSK+KVD+LKNKFGFD+AFNYKEEPDLDAALKRYFPE
Sbjct: 165 SGAVGQLVGQFAKVSGCYVVGSAGSKEKVDMLKNKFGFDDAFNYKEEPDLDAALKRYFPE 224

Query: 121 GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGF 180
           GI+IYFENVGG+MLDAVLLNMRI+GRI +CGMISQYN DKPEGVHNL+ +I KRIRMEGF
Sbjct: 225 GIDIYFENVGGEMLDAVLLNMRIRGRIAVCGMISQYNLDKPEGVHNLSAIIGKRIRMEGF 284

Query: 181 LVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVAT 240
           L  D++HLYP  L+M+IP IKEGKIVYVED AEGLE+AP AL+G+F GRNVGKQ+V VA 
Sbjct: 285 LAGDFYHLYPNLLDMVIPYIKEGKIVYVEDVAEGLENAPTALIGIFRGRNVGKQLVVVAR 344

Query: 241 E 241
           E
Sbjct: 345 E 345

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224117858|ref|XP_002331649.1| predicted protein [Populus trichocarpa] gi|222874045|gb|EEF11176.1| predicted protein [Populus trichocarpa]

 Score =  405 bits (1042), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 192/242 (79%), Positives = 224/242 (92%), Gaps = 1/242 (0%)

Query: 1   MTGWEEYSLVTAPR-LFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSA 59
           MTGWEEYSL+TA   LFKI   D+PLSYYTGILGMPG+TAYAGF+E+CSPK+GE+VF+SA
Sbjct: 107 MTGWEEYSLITATETLFKIHDKDVPLSYYTGILGMPGLTAYAGFYEICSPKKGEFVFISA 166

Query: 60  ASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFP 119
           ASGAVGQLVGQFAKL+GCYVVGSAGSKDKVDLLKNKFGFD+AFNYKEE DLDAALKRYFP
Sbjct: 167 ASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDDAFNYKEELDLDAALKRYFP 226

Query: 120 EGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEG 179
           +GI+IYFENVGGKMLDAV+LNMR++GRI++CGM+SQYN ++PEGVHNL  L+ KRI MEG
Sbjct: 227 DGIDIYFENVGGKMLDAVVLNMRVRGRISVCGMVSQYNLEQPEGVHNLMHLVPKRIHMEG 286

Query: 180 FLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVA 239
           FLV D+FHL+PK+L+M++P IK+GKIVYVED AEGLE+APAAL GLF+GRN+GKQVV V+
Sbjct: 287 FLVYDFFHLFPKYLDMVLPYIKQGKIVYVEDIAEGLENAPAALTGLFAGRNIGKQVVAVS 346

Query: 240 TE 241
            E
Sbjct: 347 HE 348

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|444302246|pdb|4HFJ|A Chain A, X-ray Crystal Structure Of A Double Bond Reductase From Nicotiana Tabacum gi|444302247|pdb|4HFJ|B Chain B, X-ray Crystal Structure Of A Double Bond Reductase From Nicotiana Tabacum gi|444302248|pdb|4HFM|A Chain A, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond Reductase From Nicotiana Tabacum gi|444302249|pdb|4HFM|B Chain B, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond Reductase From Nicotiana Tabacum gi|444302250|pdb|4HFN|A Chain A, X-ray Crystal Structure Of A Ternary Complex Of Double Bond Reductase From Nicotiana Tabacum gi|444302251|pdb|4HFN|B Chain B, X-ray Crystal Structure Of A Ternary Complex Of Double Bond Reductase From Nicotiana Tabacum

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 195/242 (80%), Positives = 220/242 (90%), Gaps = 1/242 (0%)

Query: 1   MTGWEEYSLVTAPR-LFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSA 59
           MTGWEEYS++T  + LFKI   D+PLSYYTGILGMPGMTAYAGF EVCSPK+GE VFVSA
Sbjct: 102 MTGWEEYSIITPTQTLFKIHDKDVPLSYYTGILGMPGMTAYAGFHEVCSPKKGETVFVSA 161

Query: 60  ASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFP 119
           ASGAVGQLVGQFAK++GCYVVGSAGSK+KVDLLK+KFGFDEAFNYKEE DL AALKRYFP
Sbjct: 162 ASGAVGQLVGQFAKMLGCYVVGSAGSKEKVDLLKSKFGFDEAFNYKEEQDLSAALKRYFP 221

Query: 120 EGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEG 179
           +GI+IYFENVGGKMLDAVL+NM++ GRI +CGMISQYN ++ EGVHNL CLI+KRIRMEG
Sbjct: 222 DGIDIYFENVGGKMLDAVLVNMKLYGRIAVCGMISQYNLEQTEGVHNLFCLITKRIRMEG 281

Query: 180 FLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVA 239
           FLV DY+HLYPK+LEM+IP+IK GK+VYVED A GLESAP ALVGLFSGRN+GKQVV V+
Sbjct: 282 FLVFDYYHLYPKYLEMVIPQIKAGKVVYVEDVAHGLESAPTALVGLFSGRNIGKQVVMVS 341

Query: 240 TE 241
            E
Sbjct: 342 RE 343

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|6692816|dbj|BAA89423.1| allyl alcohol dehydrogenase [Nicotiana tabacum]

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 195/242 (80%), Positives = 220/242 (90%), Gaps = 1/242 (0%)

Query: 1   MTGWEEYSLVTAPR-LFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSA 59
           MTGWEEYS++T  + LFKI   D+PLSYYTGILGMPGMTAYAGF EVCSPK+GE VFVSA
Sbjct: 102 MTGWEEYSIITPTQTLFKIHDKDVPLSYYTGILGMPGMTAYAGFHEVCSPKKGETVFVSA 161

Query: 60  ASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFP 119
           ASGAVGQLVGQFAK++GCYVVGSAGSK+KVDLLK+KFGFDEAFNYKEE DL AALKRYFP
Sbjct: 162 ASGAVGQLVGQFAKMLGCYVVGSAGSKEKVDLLKSKFGFDEAFNYKEEQDLSAALKRYFP 221

Query: 120 EGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEG 179
           +GI+IYFENVGGKMLDAVL+NM++ GRI +CGMISQYN ++ EGVHNL CLI+KRIRMEG
Sbjct: 222 DGIDIYFENVGGKMLDAVLVNMKLYGRIAVCGMISQYNLEQTEGVHNLFCLITKRIRMEG 281

Query: 180 FLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVA 239
           FLV DY+HLYPK+LEM+IP+IK GK+VYVED A GLESAP ALVGLFSGRN+GKQVV V+
Sbjct: 282 FLVFDYYHLYPKYLEMVIPQIKAGKVVYVEDVAHGLESAPTALVGLFSGRNIGKQVVMVS 341

Query: 240 TE 241
            E
Sbjct: 342 RE 343

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224117874|ref|XP_002331653.1| predicted protein [Populus trichocarpa] gi|222874049|gb|EEF11180.1| predicted protein [Populus trichocarpa]

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 191/242 (78%), Positives = 223/242 (92%), Gaps = 1/242 (0%)

Query: 1   MTGWEEYSLVTAPR-LFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSA 59
           +TGWEEYSL+TA   LFKI   D+PLSYYTGILGMPGMTAYAGF+E+CSPK+GE+VF+SA
Sbjct: 107 ITGWEEYSLITATETLFKIHDKDVPLSYYTGILGMPGMTAYAGFYEICSPKKGEFVFISA 166

Query: 60  ASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFP 119
           ASGAVGQLVGQFAKL+GCYVVGSAGSKDKVDLLKNKFGFD+AFNYKEE DLDAALKRYFP
Sbjct: 167 ASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDDAFNYKEELDLDAALKRYFP 226

Query: 120 EGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEG 179
           +GI+IYFENVGGK+LDAVLLNMR++GRI++CGM+SQYN ++PEGVHNL  L+ KRI MEG
Sbjct: 227 DGIDIYFENVGGKILDAVLLNMRVRGRISVCGMVSQYNLEQPEGVHNLMHLVLKRIHMEG 286

Query: 180 FLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVA 239
           FLV  +FHL+PK+L+M++P IK+GKIVYVED AEGLE+APAAL GLF+GRN+GKQVV V+
Sbjct: 287 FLVYYFFHLFPKYLDMVLPYIKQGKIVYVEDIAEGLENAPAALTGLFAGRNIGKQVVAVS 346

Query: 240 TE 241
            E
Sbjct: 347 RE 348

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224092856|ref|XP_002309725.1| predicted protein [Populus trichocarpa] gi|222852628|gb|EEE90175.1| predicted protein [Populus trichocarpa]

 Score =  399 bits (1025), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 188/241 (78%), Positives = 216/241 (89%), Gaps = 1/241 (0%)

Query: 2   TGWEEYSLVTAPR-LFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAA 60
           TGWEEYSL+ +PR L KI+H D+PLSYYTGILGMPGMTAYAGF+E+C+PK+GEYV++SAA
Sbjct: 105 TGWEEYSLIVSPRILIKIEHADVPLSYYTGILGMPGMTAYAGFYEICTPKKGEYVYISAA 164

Query: 61  SGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE 120
           SGAVGQ+VGQFAKL GCYVVGSAGSK+KVDLLKNKFGFDEAFNYKEEPDL AALKRYFPE
Sbjct: 165 SGAVGQIVGQFAKLSGCYVVGSAGSKEKVDLLKNKFGFDEAFNYKEEPDLTAALKRYFPE 224

Query: 121 GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGF 180
           GI+IYFENVGGKMLDAVL NMR  GRI  CGMISQYN +K EGVHNLT ++ K+IRM+GF
Sbjct: 225 GIDIYFENVGGKMLDAVLANMRTLGRIAACGMISQYNLEKHEGVHNLTLIVWKQIRMQGF 284

Query: 181 LVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVAT 240
           L   Y+HLYPKFLEM +P IK+GKIVYVEDKAEGLES P +L+ LF+G+NVGK+++ VA 
Sbjct: 285 LAASYYHLYPKFLEMALPYIKQGKIVYVEDKAEGLESGPTSLLSLFTGQNVGKKLLVVAR 344

Query: 241 E 241
           E
Sbjct: 345 E 345

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225434197|ref|XP_002279529.1| PREDICTED: NADP-dependent alkenal double bond reductase P2 [Vitis vinifera] gi|147783628|emb|CAN68149.1| hypothetical protein VITISV_035666 [Vitis vinifera]

 Score =  399 bits (1024), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 192/241 (79%), Positives = 216/241 (89%), Gaps = 1/241 (0%)

Query: 2   TGWEEYSLVTAPR-LFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAA 60
           TGWEEY+L+TAP  LFKI + D+PLSYY GILGMPG+TAYAGF+E+CSPK+GEYV+VSAA
Sbjct: 105 TGWEEYTLITAPESLFKIPNNDVPLSYYIGILGMPGITAYAGFYEICSPKKGEYVYVSAA 164

Query: 61  SGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE 120
           SGAVGQLVGQFAKL+GCYVVGSAGSK+KVDLLKNKFGFDEAFNYKEE DL A LKRYFPE
Sbjct: 165 SGAVGQLVGQFAKLIGCYVVGSAGSKEKVDLLKNKFGFDEAFNYKEEQDLVACLKRYFPE 224

Query: 121 GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGF 180
           GI+IYFENVGG MLDAVL NMR+QGRI  CGMISQYN DKP GV+NL  +I K+I+M+GF
Sbjct: 225 GIDIYFENVGGPMLDAVLANMRVQGRIAACGMISQYNLDKPVGVYNLMNIIKKQIKMQGF 284

Query: 181 LVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVAT 240
           +   YFHLYPKFLEM++P +KEGK+VYVED AEGLESAP AL+GLFSGRNVGKQVV VA 
Sbjct: 285 VAGSYFHLYPKFLEMILPHVKEGKVVYVEDIAEGLESAPQALIGLFSGRNVGKQVVLVAR 344

Query: 241 E 241
           E
Sbjct: 345 E 345

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|342898881|gb|AEL78826.1| ketone/zingerone synthase 2 [Rubus idaeus]

 Score =  396 bits (1018), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 190/243 (78%), Positives = 218/243 (89%), Gaps = 3/243 (1%)

Query: 2   TGWEEYSLVTAPR---LFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVS 58
           TGWEEY+++ A     LFKI++TD+PLSYYTGILGMPGMTAYAGF+EVCSPK+GE V++S
Sbjct: 110 TGWEEYTVINATHIESLFKIENTDVPLSYYTGILGMPGMTAYAGFYEVCSPKKGETVYIS 169

Query: 59  AASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYF 118
           AASGAVGQLVGQFAKL GCYVVGSAG+K+KVDLLKNKFGFDEAFNYKEEP+LDAALKRYF
Sbjct: 170 AASGAVGQLVGQFAKLSGCYVVGSAGTKEKVDLLKNKFGFDEAFNYKEEPNLDAALKRYF 229

Query: 119 PEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRME 178
           PEGI+IYFENVGGKMLDAVLLNMR +GRI +CGMISQYN +KPEGV NL  LI K +R++
Sbjct: 230 PEGIDIYFENVGGKMLDAVLLNMRFRGRIAVCGMISQYNLEKPEGVQNLMSLIYKEVRIQ 289

Query: 179 GFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 238
           GF V +Y+HLY KFLEM++P IKEGKI YVED  EGLESAP+AL+GLF+GRNVGKQVV V
Sbjct: 290 GFGVLNYYHLYEKFLEMVLPAIKEGKITYVEDVVEGLESAPSALIGLFTGRNVGKQVVVV 349

Query: 239 ATE 241
           + E
Sbjct: 350 SRE 352

Source: Rubus idaeus

Species: Rubus idaeus

Genus: Rubus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	241
UNIPROTKB|Q6WAU0	342	Q6WAU0 "(+)-pulegone reductase	0.991	0.698	0.745	1.2e-97
TAIR|locus:2148166	343	AT5G16990 [Arabidopsis thalian	1.0	0.702	0.753	3.2e-97
TAIR|locus:2097795	350	AT3G03080 [Arabidopsis thalian	1.0	0.688	0.731	6.8e-95
TAIR|locus:2028736	351	AT1G26320 [Arabidopsis thalian	1.0	0.686	0.724	1.8e-94
TAIR|locus:2148186	345	AT5G17000 [Arabidopsis thalian	0.995	0.695	0.737	1.8e-94
TAIR|locus:2148131	345	AER "alkenal reductase" [Arabi	0.995	0.695	0.733	4.8e-94
TAIR|locus:2148116	346	AT5G16960 [Arabidopsis thalian	0.983	0.684	0.744	3.4e-93
TAIR|locus:2153759	353	AT5G37980 [Arabidopsis thalian	0.991	0.677	0.709	1.3e-91
TAIR|locus:2153799	353	AT5G37940 [Arabidopsis thalian	0.991	0.677	0.697	7.3e-91
TAIR|locus:2154041	353	AT5G38000 [Arabidopsis thalian	0.983	0.671	0.686	4.6e-89

UNIPROTKB|Q6WAU0 Q6WAU0 "(+)-pulegone reductase" [Mentha x piperita (taxid:34256)]

 Score = 970 (346.5 bits), Expect = 1.2e-97, P = 1.2e-97
 Identities = 179/240 (74%), Positives = 213/240 (88%)

Query:     3 GWEEYSLVTAP-RLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAAS 61
             GWEEY+L+  P  LFKIQ  D+PLSYY GILGMPGMTAYAGFFE+CSPK+GE VFV+AA+
Sbjct:   103 GWEEYTLIQNPYNLFKIQDKDVPLSYYVGILGMPGMTAYAGFFEICSPKKGETVFVTAAA 162

Query:    62 GAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEG 121
             G+VGQLVGQFAK+ GCYVVGSAGSK+KVDLLKNKFGFD+AFNYKEE D D ALKR+FPEG
Sbjct:   163 GSVGQLVGQFAKMFGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEESDYDTALKRHFPEG 222

Query:   122 INIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFL 181
             I+IYF+NVGGKML+AV+ NMR+ GRI +CGM+SQY+  +PEGVHNL  LI K+IRM+GF+
Sbjct:   223 IDIYFDNVGGKMLEAVINNMRVHGRIAVCGMVSQYSLKQPEGVHNLLKLIPKQIRMQGFV 282

Query:   182 VPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVATE 241
             V DY+HLYPKFLEM++PRIKEGK+ YVED +EGLESAP+AL+G++ GRNVG QVV V+ E
Sbjct:   283 VVDYYHLYPKFLEMVLPRIKEGKVTYVEDISEGLESAPSALLGVYVGRNVGNQVVAVSRE 342

GO:0042214 "terpene metabolic process" evidence=IDA

GO:0052579 "(+)-pulegone reductase, (+)-isomenthone as substrate, activity" evidence=IDA

GO:0052580 "(+)-pulegone reductase, (-)-menthone as substrate, activity" evidence=IDA

GO:0070402 "NADPH binding" evidence=IDA

TAIR|locus:2148166 AT5G16990 [Arabidopsis thaliana (taxid:3702)]

 Score = 966 (345.1 bits), Expect = 3.2e-97, P = 3.2e-97
 Identities = 183/243 (75%), Positives = 213/243 (87%)

Query:     1 MTGWEEYSLVT--APRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVS 58
             + GWEEYS++T  A   FKIQHTD+PLSYYTG+LGMPGMTAYAGF+EVCSPK+GE V+VS
Sbjct:   101 IVGWEEYSVITPMAHMHFKIQHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKKGETVYVS 160

Query:    59 AASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYF 118
             AASGAVGQLVGQFAK++GCYVVGSAGSK+KVDLLK KFGFD+AFNYKEE DL AALKR F
Sbjct:   161 AASGAVGQLVGQFAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCF 220

Query:   119 PEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRME 178
             P+GI++YFENVGGKMLDAVLLNM   GRI +CGMISQYN +  EGVHNL+ +I KRIR++
Sbjct:   221 PKGIDMYFENVGGKMLDAVLLNMNPHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIRIQ 280

Query:   179 GFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 238
             GF+V D++  YPKFLE+++PRIKEGKI YVED A+GLE AP ALVGLF G+NVGKQVV +
Sbjct:   281 GFVVADFYDKYPKFLELVLPRIKEGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVI 340

Query:   239 ATE 241
             A E
Sbjct:   341 ARE 343

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0006979 "response to oxidative stress" evidence=IGI;IEP

TAIR|locus:2097795 AT3G03080 [Arabidopsis thaliana (taxid:3702)]

 Score = 944 (337.4 bits), Expect = 6.8e-95, P = 6.8e-95
 Identities = 177/242 (73%), Positives = 210/242 (86%)

Query:     1 MTGWEEYSLVTAP-RLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSA 59
             + GW EYSL+T     +KIQHTD+PLSYYTG+LGMPGMTAYAGF+E+CSPK+GE VFVSA
Sbjct:   109 LVGWGEYSLITPDFSHYKIQHTDVPLSYYTGLLGMPGMTAYAGFYEICSPKKGETVFVSA 168

Query:    60 ASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFP 119
             ASGAVGQLVGQFAK++GCYVVGSAGS +KVDLLKNKFGFD+AFNYK EPDL+AALKR FP
Sbjct:   169 ASGAVGQLVGQFAKIMGCYVVGSAGSNEKVDLLKNKFGFDDAFNYKAEPDLNAALKRCFP 228

Query:   120 EGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEG 179
             EGI+IYFENVGGKMLDAVLLNM++ GRI +CGMISQYN +  EGVHNL  +I KRIR++G
Sbjct:   229 EGIDIYFENVGGKMLDAVLLNMKLHGRIAVCGMISQYNLEDQEGVHNLANVIYKRIRIKG 288

Query:   180 FLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVA 239
             F+V DYF  + KFL+ ++P I+EGKI YVED  EGLE+ P+AL+GLF G+NVGKQ++ VA
Sbjct:   289 FVVSDYFDKHLKFLDFVLPYIREGKITYVEDVVEGLENGPSALLGLFHGKNVGKQLIAVA 348

Query:   240 TE 241
              E
Sbjct:   349 RE 350

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

GO:0030036 "actin cytoskeleton organization" evidence=RCA

GO:0030048 "actin filament-based movement" evidence=RCA

TAIR|locus:2028736 AT1G26320 [Arabidopsis thaliana (taxid:3702)]

 Score = 940 (336.0 bits), Expect = 1.8e-94, P = 1.8e-94
 Identities = 176/243 (72%), Positives = 208/243 (85%)

Query:     1 MTGWEEYSLVTAPRL--FKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVS 58
             + GWEEYS++T      FKI+HTD+PLSYYTG+LGMPGMTAYAGF+EVCSPK+GE VFVS
Sbjct:   109 LVGWEEYSVITLTTYSHFKIEHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKKGETVFVS 168

Query:    59 AASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYF 118
             AASGAVGQLVGQFAKL+GCYVVGSAGSK+KV LLK KFGFD+AFNYKEE D  AALKRYF
Sbjct:   169 AASGAVGQLVGQFAKLMGCYVVGSAGSKEKVYLLKTKFGFDDAFNYKEEKDFSAALKRYF 228

Query:   119 PEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRME 178
             PEGI+IYFENVGGKMLDAVL+NM++ GR+ +CGMISQYN   PEGVHNL  ++ KRI+++
Sbjct:   229 PEGIDIYFENVGGKMLDAVLINMKLHGRVAVCGMISQYNLVDPEGVHNLPTILYKRIQLQ 288

Query:   179 GFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 238
             GF V D++  YPKFL+ ++P I+EGKI YVED AEG ES P+AL+GLF G+NVGKQ+  V
Sbjct:   289 GFGVCDFYDKYPKFLDFVLPYIREGKITYVEDIAEGFESGPSALLGLFEGKNVGKQLFVV 348

Query:   239 ATE 241
             A E
Sbjct:   349 ARE 351

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEP

TAIR|locus:2148186 AT5G17000 [Arabidopsis thaliana (taxid:3702)]

 Score = 940 (336.0 bits), Expect = 1.8e-94, P = 1.8e-94
 Identities = 180/244 (73%), Positives = 207/244 (84%)

Query:     1 MTGWEEYSLVTAPRL---FKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFV 57
             + GWEEYS++T P     FKIQHTD+PLSYYTG+LGMPGMTAYAGF+EVCSPK+GE V+V
Sbjct:   103 IVGWEEYSVIT-PMTHMHFKIQHTDIPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYV 161

Query:    58 SAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRY 117
             SAASGAVGQLVGQFAK++GCYVVGSAGS +KVDLLK KFGFD+AFNYKEEPDL AALKR 
Sbjct:   162 SAASGAVGQLVGQFAKMMGCYVVGSAGSTEKVDLLKTKFGFDDAFNYKEEPDLSAALKRC 221

Query:   118 FPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRM 177
             FP GI+IYFENVGGKMLDAVLLNM   GRI +CGMISQYN +  EGVHNL+ +I KRIR+
Sbjct:   222 FPTGIDIYFENVGGKMLDAVLLNMNPHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIRI 281

Query:   178 EGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVE 237
             +GF V D++  Y KFL+ ++P IKEGKI YVED A+GLE  P ALVGLF G+NVGKQVV 
Sbjct:   282 QGFAVFDFYEKYSKFLDFVLPHIKEGKITYVEDVADGLEKGPEALVGLFHGKNVGKQVVV 341

Query:   238 VATE 241
             +A E
Sbjct:   342 IARE 345

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006865 "amino acid transport" evidence=RCA

GO:0015824 "proline transport" evidence=RCA

GO:0006979 "response to oxidative stress" evidence=IEP

TAIR|locus:2148131 AER "alkenal reductase" [Arabidopsis thaliana (taxid:3702)]

 Score = 936 (334.5 bits), Expect = 4.8e-94, P = 4.8e-94
 Identities = 179/244 (73%), Positives = 208/244 (85%)

Query:     1 MTGWEEYSLVTAPRL---FKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFV 57
             +  WEEYS++T P     FKIQHTD+PLSYYTG+LGMPGMTAYAGF+EVCSPK+GE V+V
Sbjct:   103 IVAWEEYSVIT-PMTHAHFKIQHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYV 161

Query:    58 SAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRY 117
             SAASGAVGQLVGQ AK++GCYVVGSAGSK+KVDLLK KFGFD+AFNYKEE DL AALKR 
Sbjct:   162 SAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRC 221

Query:   118 FPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRM 177
             FP GI+IYFENVGGKMLDAVL+NM + GRI +CGMISQYN +  EGVHNL+ +I KRIR+
Sbjct:   222 FPNGIDIYFENVGGKMLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIRI 281

Query:   178 EGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVE 237
             +GF+V D++  Y KFLE ++P I+EGKI YVED A+GLE AP ALVGLF G+NVGKQVV 
Sbjct:   282 QGFVVSDFYDKYSKFLEFVLPHIREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVV 341

Query:   238 VATE 241
             VA E
Sbjct:   342 VARE 345

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0006979 "response to oxidative stress" evidence=IGI;IEP;IMP

GO:0032440 "2-alkenal reductase [NAD(P)

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0006865 "amino acid transport" evidence=RCA

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

GO:0015824 "proline transport" evidence=RCA

TAIR|locus:2148116 AT5G16960 [Arabidopsis thaliana (taxid:3702)]

 Score = 928 (331.7 bits), Expect = 3.4e-93, P = 3.4e-93
 Identities = 178/239 (74%), Positives = 205/239 (85%)

Query:     3 GWEEYSLVTA-PRL-FKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAA 60
             GWEEYS++T  P L FKI HT+ PLSYYTG+LGMPGMTAY GF+E+C+PK+G+ VFVSAA
Sbjct:   106 GWEEYSVITPIPNLHFKIHHTNFPLSYYTGLLGMPGMTAYVGFYEICTPKKGDTVFVSAA 165

Query:    61 SGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE 120
             SGAVGQLVGQFAKL+GCYVVGSAGSK+KVDLLKNKFGFD+AFNYKEE +L  ALKR FPE
Sbjct:   166 SGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEHNLIGALKRCFPE 225

Query:   121 GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGF 180
             GI+IYFENVGGKMLDAV+LNMR  GRI  CGMISQYN   PEG++ L+ +  KRIR+EGF
Sbjct:   226 GIDIYFENVGGKMLDAVILNMRPHGRIAACGMISQYNLKNPEGIYGLSLITYKRIRIEGF 285

Query:   181 LVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVA 239
                DYFH Y +FLE ++P IKEGKI YVED A+GLESAPAALVGLF G+NVGKQ+V V+
Sbjct:   286 NCFDYFHKYSEFLEFVVPYIKEGKIKYVEDVADGLESAPAALVGLFHGKNVGKQLVVVS 344

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEP

TAIR|locus:2153759 AT5G37980 [Arabidopsis thaliana (taxid:3702)]

 Score = 913 (326.5 bits), Expect = 1.3e-91, P = 1.3e-91
 Identities = 171/241 (70%), Positives = 203/241 (84%)

Query:     3 GWEEYSLVT-APRL-FKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAA 60
             GWEEYS++T  P   FKI HTD+PLS+YTG+LG+PG+TAY GF+E+CSPK+GE VFVSAA
Sbjct:   113 GWEEYSVITPTPSSHFKIHHTDVPLSFYTGLLGIPGLTAYVGFYEICSPKKGETVFVSAA 172

Query:    61 SGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE 120
             SGAVGQLVGQFAK+ GCYVVGSA SK+KVDLLK KFG+DEAFNYKEE DL AALKR FPE
Sbjct:   173 SGAVGQLVGQFAKMAGCYVVGSASSKEKVDLLKTKFGYDEAFNYKEEHDLSAALKRCFPE 232

Query:   121 GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGF 180
             GI+IYFENVGGKMLDAVL NMR  GRI  CGMISQYN  +PEGVHNL  ++ KRIR++GF
Sbjct:   233 GIDIYFENVGGKMLDAVLENMRTHGRIAACGMISQYNLKEPEGVHNLASIVYKRIRVQGF 292

Query:   181 LVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVAT 240
                ++F  Y KFL+ ++P ++EGKI YVED A+GLE+ P+AL+GLF G+NVGKQ+V VA 
Sbjct:   293 AAVEFFDKYSKFLDFILPYVREGKITYVEDIAQGLENGPSALIGLFHGKNVGKQLVAVAR 352

Query:   241 E 241
             E
Sbjct:   353 E 353

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009506 "plasmodesma" evidence=IDA

GO:0006979 "response to oxidative stress" evidence=IEP

TAIR|locus:2153799 AT5G37940 [Arabidopsis thaliana (taxid:3702)]

 Score = 906 (324.0 bits), Expect = 7.3e-91, P = 7.3e-91
 Identities = 168/241 (69%), Positives = 202/241 (83%)

Query:     3 GWEEYSLVT-APRL-FKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAA 60
             GWEEYS++T  P   FKI HTD+PLS+YTG+LG+PG+TAY GF+E+CSPK+GE VFVSAA
Sbjct:   113 GWEEYSVITPTPSSHFKIHHTDVPLSFYTGLLGIPGLTAYVGFYEICSPKKGETVFVSAA 172

Query:    61 SGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE 120
             SGAVGQLVGQFAK+ GCYVVGSA SK+KVDLLK KFG+D+AFNYKEE DL AALKR FPE
Sbjct:   173 SGAVGQLVGQFAKMAGCYVVGSASSKEKVDLLKTKFGYDDAFNYKEEKDLSAALKRCFPE 232

Query:   121 GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGF 180
             GI+IYFENVGGKMLDAVL NMR  GRI  CGMISQYN  +PEG+HN   ++ KRIR++ F
Sbjct:   233 GIDIYFENVGGKMLDAVLQNMRTHGRIAACGMISQYNLKEPEGLHNTATIVHKRIRVQDF 292

Query:   181 LVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVAT 240
                ++F  Y KFL+ ++P ++EGKI YVED A+GLE+ P+AL+GLF G+NVGKQ+VEVA 
Sbjct:   293 AAVEFFDRYSKFLDFILPHVREGKITYVEDIAQGLENGPSALIGLFHGKNVGKQLVEVAR 352

Query:   241 E 241
             E
Sbjct:   353 E 353

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEP

TAIR|locus:2154041 AT5G38000 [Arabidopsis thaliana (taxid:3702)]

 Score = 889 (318.0 bits), Expect = 4.6e-89, P = 4.6e-89
 Identities = 164/239 (68%), Positives = 201/239 (84%)

Query:     3 GWEEYSLVT-APRL-FKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAA 60
             GWEEYS++T  P   FKI HTD+PLS+YTG+LG+PG+TAY GF+E+CSPK+GE VFVSAA
Sbjct:   113 GWEEYSVITPTPSSHFKIHHTDVPLSFYTGLLGIPGLTAYIGFYEICSPKKGETVFVSAA 172

Query:    61 SGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE 120
             SGAVGQLVGQFAK+ GCYVVGSA S++KVDLLK KFG+D+AFNYKEE DL AALKR FPE
Sbjct:   173 SGAVGQLVGQFAKMAGCYVVGSASSEEKVDLLKTKFGYDDAFNYKEEKDLSAALKRCFPE 232

Query:   121 GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGF 180
             GI+IYFENVGGKML+AVL NMR  GRI  CGMISQYN  KPE +HN   ++ KRIR++GF
Sbjct:   233 GIDIYFENVGGKMLEAVLENMRTHGRIAACGMISQYNLKKPEVLHNTATIVHKRIRVQGF 292

Query:   181 LVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVA 239
                ++F  Y KFL+ ++P ++EGK+ YVED ++GLE+ P+AL+GLF G+NVGKQ+VEVA
Sbjct:   293 AAVEFFDRYSKFLDFILPHVREGKLTYVEDISQGLENGPSALIGLFHGKNVGKQLVEVA 351

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6WAU0	PULR_MENPI	1, ., 3, ., 1, ., 8, 1	0.7427	0.9958	0.7017	N/A	no
Q39173	P2_ARATH	1, ., 3, ., 1, ., 7, 4	0.7530	1.0	0.7026	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.3.1	0.963
3rd Layer	1.3.1.74	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	241
cd08295	338	cd08295, double_bond_reductase_like, Arabidopsis a	1e-160
PLN03154	348	PLN03154, PLN03154, putative allyl alcohol dehydro	1e-140
cd05288	329	cd05288, PGDH, Prostaglandin dehydrogenases	1e-123
COG2130	340	COG2130, COG2130, Putative NADP-dependent oxidored	1e-102
cd08294	329	cd08294, leukotriene_B4_DH_like, 13-PGR is a bifun	5e-88
TIGR02825	325	TIGR02825, B4_12hDH, leukotriene B4 12-hydroxydehy	3e-61
cd08293	345	cd08293, PTGR2, Prostaglandin reductase	1e-54
cd08250	329	cd08250, Mgc45594_like, Mgc45594 gene product and	1e-49
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	5e-26
cd08253	325	cd08253, zeta_crystallin, Zeta-crystallin with NAD	4e-23
cd05289	309	cd05289, MDR_like_2, alcohol dehydrogenase and qui	7e-23
cd05276	323	cd05276, p53_inducible_oxidoreductase, PIG3 p53-in	5e-20
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	5e-20
cd08266	342	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t	6e-18
cd08241	323	cd08241, QOR1, Quinone oxidoreductase (QOR)	3e-17
pfam00107	131	pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase	8e-17
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	1e-16
cd05286	320	cd05286, QOR2, Quinone oxidoreductase (QOR)	2e-16
cd08272	326	cd08272, MDR6, Medium chain dehydrogenases/reducta	5e-16
cd08276	336	cd08276, MDR7, Medium chain dehydrogenases/reducta	1e-15
cd08271	325	cd08271, MDR5, Medium chain dehydrogenases/reducta	2e-15
cd08275	337	cd08275, MDR3, Medium chain dehydrogenases/reducta	2e-15
TIGR02824	325	TIGR02824, quinone_pig3, putative NAD(P)H quinone	1e-14
PTZ00354	334	PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi	9e-14
cd08251	303	cd08251, polyketide_synthase, polyketide synthase	2e-13
cd08268	328	cd08268, MDR2, Medium chain dehydrogenases/reducta	2e-13
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	2e-12
cd08244	324	cd08244, MDR_enoyl_red, Possible enoyl reductase	1e-10
cd05280	325	cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putativ	1e-10
cd05282	323	cd05282, ETR_like, 2-enoyl thioester reductase-lik	2e-09
cd05195	293	cd05195, enoyl_red, enoyl reductase of polyketide	4e-09
cd08274	350	cd08274, MDR9, Medium chain dehydrogenases/reducta	5e-09
cd08290	341	cd08290, ETR, 2-enoyl thioester reductase (ETR)	7e-09
smart00829	287	smart00829, PKS_ER, Enoylreductase	3e-08
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	4e-08
cd08249	339	cd08249, enoyl_reductase_like, enoyl_reductase_lik	5e-08
TIGR02823	323	TIGR02823, oxido_YhdH, putative quinone oxidoreduc	2e-07
cd08243	320	cd08243, quinone_oxidoreductase_like_1, Quinone ox	3e-07
PRK13771	334	PRK13771, PRK13771, putative alcohol dehydrogenase	6e-07
COG1063	350	COG1063, Tdh, Threonine dehydrogenase and related	1e-06
cd08270	305	cd08270, MDR4, Medium chain dehydrogenases/reducta	2e-06
cd08263	367	cd08263, Zn_ADH10, Alcohol dehydrogenases of the M	4e-06
cd08264	325	cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t	5e-06
cd08273	331	cd08273, MDR8, Medium chain dehydrogenases/reducta	1e-05
cd08297	341	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA	3e-05
cd08289	326	cd08289, MDR_yhfp_like, Yhfp putative quinone oxid	4e-05
cd08255	277	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro	7e-05
PRK10754	327	PRK10754, PRK10754, quinone oxidoreductase, NADPH-	1e-04
COG1062	366	COG1062, AdhC, Zn-dependent alcohol dehydrogenases	2e-04
cd08248	350	cd08248, RTN4I1, Human Reticulon 4 Interacting Pro	3e-04
cd08245	330	cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD	3e-04
cd08291	324	cd08291, ETR_like_1, 2-enoyl thioester reductase (	5e-04
cd08260	345	cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD	7e-04
cd08254	338	cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e	0.001
cd08258	306	cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD	0.002
cd08236	343	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog	0.004

>gnl|CDD|176255 cd08295, double_bond_reductase_like, Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

 Score =  447 bits (1152), Expect = e-160
 Identities = 178/238 (74%), Positives = 201/238 (84%), Gaps = 1/238 (0%)

Query: 2   TGWEEYSLVTAP-RLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAA 60
           TGWEEYSL+     L KI HTD+PLSYY G+LGMPG+TAYAGF+EVC PK+GE VFVSAA
Sbjct: 101 TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAA 160

Query: 61  SGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE 120
           SGAVGQLVGQ AKL GCYVVGSAGS +KVDLLKNK GFD+AFNYKEEPDLDAALKRYFP 
Sbjct: 161 SGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFPN 220

Query: 121 GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGF 180
           GI+IYF+NVGGKMLDAVLLNM + GRI  CGMISQYN + PEGV NL  +I KR++++GF
Sbjct: 221 GIDIYFDNVGGKMLDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGF 280

Query: 181 LVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 238
           LV DY H YP+FLE M   IKEGK+ YVED A+GLESAP A VGLF+G N+GKQVV+V
Sbjct: 281 LVGDYLHRYPEFLEEMSGYIKEGKLKYVEDIADGLESAPEAFVGLFTGSNIGKQVVKV 338

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in inflamatory cells, and in other cells by bifunctional LTB4 12-HD/PGR. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 338

>gnl|CDD|215606 PLN03154, PLN03154, putative allyl alcohol dehydrogenase; Provisional

 Score =  397 bits (1021), Expect = e-140
 Identities = 177/244 (72%), Positives = 204/244 (83%), Gaps = 3/244 (1%)

Query: 1   MTGWEEYSLV--TAPRLFKIQ-HTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFV 57
           +TGWEEYSL+  +  +L KIQ   D+PLSY+ G+LGM G TAYAGF+EVCSPK+G+ VFV
Sbjct: 105 ITGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFV 164

Query: 58  SAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRY 117
           SAASGAVGQLVGQ AKL GCYVVGSAGS  KVDLLKNK GFDEAFNYKEEPDLDAALKRY
Sbjct: 165 SAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRY 224

Query: 118 FPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRM 177
           FPEGI+IYF+NVGG MLDA LLNM+I GRI +CGM+S  +    +G+HNL  LISKRIRM
Sbjct: 225 FPEGIDIYFDNVGGDMLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRM 284

Query: 178 EGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVE 237
           +GFL  DY HL+P+FLE +    K+GKIVY+ED +EGLESAPAALVGLFSG+NVGKQV+ 
Sbjct: 285 QGFLQSDYLHLFPQFLENVSRYYKQGKIVYIEDMSEGLESAPAALVGLFSGKNVGKQVIR 344

Query: 238 VATE 241
           VA E
Sbjct: 345 VAKE 348

Length = 348

>gnl|CDD|176190 cd05288, PGDH, Prostaglandin dehydrogenases

 Score =  351 bits (904), Expect = e-123
 Identities = 123/238 (51%), Positives = 159/238 (66%), Gaps = 3/238 (1%)

Query: 1   MTGWEEYSLVTAPR-LFKIQHTD-MPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVS 58
             GW+EY++V     L K+  +  +PLS Y G+LGM G+TAY G  E+  PK GE V VS
Sbjct: 93  FLGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVS 152

Query: 59  AASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYF 118
           AA+GAVG +VGQ AKL+G  VVG AGS +K   L  + GFD A NYK  PDL  ALK   
Sbjct: 153 AAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDAAINYKT-PDLAEALKEAA 211

Query: 119 PEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRME 178
           P+GI++YF+NVGG++LDA L  +   GRI LCG ISQYN  +P G  NL  +I+KR+ M+
Sbjct: 212 PDGIDVYFDNVGGEILDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQ 271

Query: 179 GFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVV 236
           GF+V DY   +P+ L  +   + EGK+ Y ED  EGLE+AP A +GLF+G+N GK VV
Sbjct: 272 GFIVSDYADRFPEALAELAKWLAEGKLKYREDVVEGLENAPEAFLGLFTGKNTGKLVV 329

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|225041 COG2130, COG2130, Putative NADP-dependent oxidoreductases [General function prediction only]

 Score =  298 bits (765), Expect = e-102
 Identities = 121/241 (50%), Positives = 161/241 (66%), Gaps = 3/241 (1%)

Query: 1   MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAA 60
           ++GW+EY++     L K+  +  PLS Y G+LGMPG+TAY G  ++  PK GE V VSAA
Sbjct: 100 VSGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAA 159

Query: 61  SGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE 120
           +GAVG +VGQ AKL GC VVG AG  +K D L  + GFD   +YK E D   ALK   P+
Sbjct: 160 AGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAE-DFAQALKEACPK 218

Query: 121 GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNN-DKPEGVHNLTCLISKRIRMEG 179
           GI++YFENVGG++LDAVL  + +  RI +CG ISQYN  + P G   L  L++KR+R++G
Sbjct: 219 GIDVYFENVGGEVLDAVLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQG 278

Query: 180 FLV-PDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 238
           F+V  DY   +P+ L  +   +KEGKI Y E   +GLE+AP A +GL SG+N GK VV+V
Sbjct: 279 FIVASDYDQRFPEALRELGGWVKEGKIQYRETIVDGLENAPEAFIGLLSGKNFGKLVVKV 338

Query: 239 A 239
           A
Sbjct: 339 A 339

Length = 340

>gnl|CDD|176254 cd08294, leukotriene_B4_DH_like, 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

 Score =  263 bits (674), Expect = 5e-88
 Identities = 109/243 (44%), Positives = 152/243 (62%), Gaps = 9/243 (3%)

Query: 3   GWEEYSLV---TAPRLFKI---QHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVF 56
           GW  +++      P L+K+      D+P S   G+LGMPG+TAY G  E+C PK GE V 
Sbjct: 89  GWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVV 148

Query: 57  VSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKR 116
           V+ A+GAVG LVGQ AK+ GC V+G AGS DKV  LK + GFD  FNYK    L+ ALK 
Sbjct: 149 VNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLK-ELGFDAVFNYKTV-SLEEALKE 206

Query: 117 YFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNL-TCLISKRI 175
             P+GI+ YF+NVGG+    VL +M   GR+ +CG IS YN+ +P+    +   +I K++
Sbjct: 207 AAPDGIDCYFDNVGGEFSSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQL 266

Query: 176 RMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQV 235
           +MEGF+V  +   +P+ L+ ++  IKEGK+ Y E   EG E+ P A +G+  G N GK +
Sbjct: 267 KMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYREHVTEGFENMPQAFIGMLKGENTGKAI 326

Query: 236 VEV 238
           V+V
Sbjct: 327 VKV 329

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|131872 TIGR02825, B4_12hDH, leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

 Score =  194 bits (495), Expect = 3e-61
 Identities = 109/246 (44%), Positives = 146/246 (59%), Gaps = 18/246 (7%)

Query: 3   GWEEYSLVTAPRLFKIQHT---DMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSA 59
           GW  +S+     L K+       +PLS   G +GMPG+TAY G  E+C  K GE V V+A
Sbjct: 87  GWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNA 146

Query: 60  ASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFP 119
           A+GAVG +VGQ AKL GC VVG+AGS +KV  LK K GFD AFNYK    L+  LK+  P
Sbjct: 147 AAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLK-KLGFDVAFNYKTVKSLEETLKKASP 205

Query: 120 EGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNND-------KPEGVHNLTCLIS 172
           +G + YF+NVGG+  + V+  M+  GRI +CG IS YN          PE V      I 
Sbjct: 206 DGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIV------IY 259

Query: 173 KRIRMEGFLVPDY-FHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNV 231
           + +RMEGF+V  +   +  K L+ ++  + EGKI Y E   EG E+ PAA +G+  G N+
Sbjct: 260 QELRMEGFIVNRWQGEVRQKALKELLKWVLEGKIQYKEYVIEGFENMPAAFMGMLKGENL 319

Query: 232 GKQVVE 237
           GK +V+
Sbjct: 320 GKTIVK 325

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. Length = 325

>gnl|CDD|176253 cd08293, PTGR2, Prostaglandin reductase

 Score =  178 bits (453), Expect = 1e-54
 Identities = 96/247 (38%), Positives = 141/247 (57%), Gaps = 16/247 (6%)

Query: 4   WEEYSLVTAPRLFKI--QHTDMPLSYYTGILGMPGMTAYAGFFE--VCSPKQGEYVFVSA 59
           W+ Y+++    L K+  Q  D  LSY+ G +G+PG+TA  G  E    +P   + + VS 
Sbjct: 103 WQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSG 162

Query: 60  ASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYF 118
           A+GA G L GQ  +L+GC  VVG  GS +K  LLK++ GFD A NYK + ++   L+   
Sbjct: 163 AAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTD-NVAERLRELC 221

Query: 119 PEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKP------EGVHNLTCLIS 172
           PEG+++YF+NVGG++ D V+  M     I LCG ISQYN D P      E       ++ 
Sbjct: 222 PEGVDVYFDNVGGEISDTVISQMNENSHIILCGQISQYNKDVPYPPPLPEAT---EAILK 278

Query: 173 KR-IRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNV 231
           +R I  E FLV +Y   + + +  +   +KEGK+   E   EGLE+A  A   + +G N+
Sbjct: 279 ERNITRERFLVLNYKDKFEEAIAQLSQWVKEGKLKVKETVYEGLENAGEAFQSMMNGGNI 338

Query: 232 GKQVVEV 238
           GKQ+V+V
Sbjct: 339 GKQIVKV 345

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 345

>gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members

 Score =  164 bits (418), Expect = 1e-49
 Identities = 86/243 (35%), Positives = 129/243 (53%), Gaps = 22/243 (9%)

Query: 6   EYSLVTAPRLFKIQHTD-----MPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAA 60
           EY +V A     +         + +S         G+TA     EV   K GE V V+AA
Sbjct: 98  EYQVVPARHAVPVPELKPEVLPLLVS---------GLTASIALEEVGEMKSGETVLVTAA 148

Query: 61  SGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE 120
           +G  GQ   Q AKL GC+V+G+  S +K + LK+  G D   NYK E DL   LK+ +P+
Sbjct: 149 AGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKS-LGCDRPINYKTE-DLGEVLKKEYPK 206

Query: 121 GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDK---PEGVHNLTC-LISKRIR 176
           G+++ +E+VGG+M D  + N+ ++GR+ + G IS Y +     P     L   L++K   
Sbjct: 207 GVDVVYESVGGEMFDTCVDNLALKGRLIVIGFISGYQSGTGPSPVKGATLPPKLLAKSAS 266

Query: 177 MEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAE--GLESAPAALVGLFSGRNVGKQ 234
           + GF +P Y  L P+ L+ ++   + GK+V   D     GLES   A+  L+SG+N+GK 
Sbjct: 267 VRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLYSGKNIGKV 326

Query: 235 VVE 237
           VVE
Sbjct: 327 VVE 329

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score =  102 bits (257), Expect = 5e-26
 Identities = 71/238 (29%), Positives = 107/238 (44%), Gaps = 9/238 (3%)

Query: 3   GWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASG 62
           G+ EY +V A  L  +    +        L + G+TA+   F+    K GE V V  A+G
Sbjct: 96  GYAEYVVVPADWLVPLP-DGLSFEE-AAALPLAGLTAWLALFDRAGLKPGETVLVHGAAG 153

Query: 63  AVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGI 122
            VG    Q AK +G  VV    S +K++LLK + G D   NY+EE  ++   +    +G+
Sbjct: 154 GVGSAAIQLAKALGATVVAVVSSSEKLELLK-ELGADHVINYREEDFVEQVRELTGGKGV 212

Query: 123 NIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEG-FL 181
           ++  + VGG    A L  +   GR+   G +S      P    NL  L+ KR+ + G  L
Sbjct: 213 DVVLDTVGGDTFAASLAALAPGGRLVSIGALS----GGPPVPLNLLPLLGKRLTLRGVTL 268

Query: 182 VPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFS-GRNVGKQVVEV 238
                    + L  +   +  GK+  V D+   L  APAA   L    R  GK V++V
Sbjct: 269 GSRDPEALAEALAELFDLLASGKLKPVIDRVYPLAEAPAAAAHLLLERRTTGKVVLKV 326

Length = 326

>gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

 Score = 95.0 bits (237), Expect = 4e-23
 Identities = 67/240 (27%), Positives = 104/240 (43%), Gaps = 22/240 (9%)

Query: 6   EYSLVTAPRLFKIQHTDMP--LSYYTGI-LGMPGMTAYAGFFEVCSPKQGEYVFVSAASG 62
           EY +V A +L       +P  +S+  G  LG+P +TAY   F     K GE V V   SG
Sbjct: 101 EYVVVPADQLVP-----LPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSG 155

Query: 63  AVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGI 122
           AVG    Q A+  G  V+ +A S +  +L++   G D  FNY+ E   D  L     +G+
Sbjct: 156 AVGHAAVQLARWAGARVIATASSAEGAELVRQA-GADAVFNYRAEDLADRILAATAGQGV 214

Query: 123 NIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLV 182
           ++  E +    L   L  +   GRI +      Y +    G   +  L++K   + G L+
Sbjct: 215 DVIIEVLANVNLAKDLDVLAPGGRIVV------YGSGGLRGTIPINPLMAKEASIRGVLL 268

Query: 183 PDYFHLYPKFLEMMIPRI----KEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 238
              +   P+        I     +G +  V  +   LE A AA   + SG  +GK V++ 
Sbjct: 269 ---YTATPEERAAAAEAIAAGLADGALRPVIAREYPLEEAAAAHEAVESGGAIGKVVLDP 325

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

 Score = 94.2 bits (235), Expect = 7e-23
 Identities = 58/206 (28%), Positives = 86/206 (41%), Gaps = 22/206 (10%)

Query: 32  LGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDL 91
           L + G+TA+   FE+   K G+ V +  A+G VG    Q AK  G  V+ +A S    D 
Sbjct: 125 LPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGARVIATA-SAANADF 183

Query: 92  LKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRI-TLC 150
           L+   G DE  +Y +     AA     P G++   + VGG+ L   L  ++  GR+ ++ 
Sbjct: 184 LR-SLGADEVIDYTKGDFERAAA----PGGVDAVLDTVGGETLARSLALVKPGGRLVSIA 238

Query: 151 GMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVED 210
           G        K  GV           R     V        + L  +   ++ GK+  V D
Sbjct: 239 GPPPAEQAAKRRGV-----------RAGFVFVEP----DGEQLAELAELVEAGKLRPVVD 283

Query: 211 KAEGLESAPAALVGLFSGRNVGKQVV 236
           +   LE A  A   L SG   GK V+
Sbjct: 284 RVFPLEDAAEAHERLESGHARGKVVL 309

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309

>gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase

 Score = 86.7 bits (216), Expect = 5e-20
 Identities = 59/209 (28%), Positives = 93/209 (44%), Gaps = 19/209 (9%)

Query: 37  MTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF 96
            TA+   F++   K GE V +   +  VG    Q AK +G  V+ +AGS++K++  +   
Sbjct: 125 FTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEACR-AL 183

Query: 97  GFDEAFNYKEEPDLDAALKRYF-PEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQ 155
           G D A NY+ E D    +K      G+++  + VGG  L   L  +   GR+ L G++  
Sbjct: 184 GADVAINYRTE-DFAEEVKEATGGRGVDVILDMVGGDYLARNLRALAPDGRLVLIGLLG- 241

Query: 156 YNNDKPEGVH---NLTCLISKRIRMEGFLV---PDYF--HLYPKFLEMMIPRIKEGKIVY 207
                  G     +L  L+ KR+ + G  +          L   F E + P    G+I  
Sbjct: 242 -------GAKAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIRP 294

Query: 208 VEDKAEGLESAPAALVGLFSGRNVGKQVV 236
           V DK   LE A  A   + S  ++GK V+
Sbjct: 295 VIDKVFPLEEAAEAHRRMESNEHIGKIVL 323

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 85.8 bits (213), Expect = 5e-20
 Identities = 56/196 (28%), Positives = 82/196 (41%), Gaps = 14/196 (7%)

Query: 3   GWEEYSLVTAPRLFKIQHTDMPLSYYTGIL-GMPGMTAYAGFFEVCSPKQGEYVFVSAAS 61
           G+ EY +V A  L  +      LS     L   P  TAY         K G+ V V  A 
Sbjct: 88  GFAEYVVVPADNLVPL---PDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAG 144

Query: 62  GAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEG 121
           G VG L  Q AK  G  V+ +  S +K++L K + G D   +YKEE DL+  L+     G
Sbjct: 145 G-VGLLAAQLAKAAGARVIVTDRSDEKLELAK-ELGADHVIDYKEE-DLEEELRLTGGGG 201

Query: 122 INIYFENVGGKM-LDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGF 180
            ++  + VGG   L   L  +R  GRI + G  S               L+ K + + G 
Sbjct: 202 ADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTSGGPPLDDLRR-----LLFKELTIIGS 256

Query: 181 LVPDYFHLYPKFLEMM 196
                   + + L+++
Sbjct: 257 TGGTRED-FEEALDLL 271

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family

 Score = 81.1 bits (201), Expect = 6e-18
 Identities = 49/191 (25%), Positives = 80/191 (41%), Gaps = 15/191 (7%)

Query: 50  KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPD 109
           + GE V V  A   VG    Q AKL G  V+ +AGS+DK++  K   G D   +Y++E  
Sbjct: 165 RPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKE-LGADYVIDYRKEDF 223

Query: 110 LDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTC 169
           +    +     G+++  E+VG    +  L ++   GR+  CG  + Y     E   +L  
Sbjct: 224 VREVRELTGKRGVDVVVEHVGAATWEKSLKSLARGGRLVTCGATTGY-----EAPIDLRH 278

Query: 170 LISKRIRMEG-FL-VPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFS 227
           +  +++ + G  +          + +         GK+  V D    LE A  A   L S
Sbjct: 279 VFWRQLSILGSTMGTKAELDEALRLVF-------RGKLKPVIDSVFPLEEAAEAHRRLES 331

Query: 228 GRNVGKQVVEV 238
               GK V+  
Sbjct: 332 REQFGKIVLTP 342

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342

>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR)

 Score = 78.7 bits (195), Expect = 3e-17
 Identities = 67/247 (27%), Positives = 107/247 (43%), Gaps = 28/247 (11%)

Query: 3   GWEEYSLVTAPRLFKI-------QHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYV 55
           G+ E  +V A  +F +       +   +P++Y          TAY         + GE V
Sbjct: 93  GFAEEVVVPAAAVFPLPDGLSFEEAAALPVTY---------GTAYHALVRRARLQPGETV 143

Query: 56  FVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALK 115
            V  A+G VG    Q AK +G  V+ +A S++K+ L +   G D   +Y  +PDL   +K
Sbjct: 144 LVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALAR-ALGADHVIDY-RDPDLRERVK 201

Query: 116 -RYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKR 174
                 G+++ ++ VGG + +A L ++   GR+ + G  S    + P+   NL  L+ K 
Sbjct: 202 ALTGGRGVDVVYDPVGGDVFEASLRSLAWGGRLLVIGFAS---GEIPQIPANL--LLLKN 256

Query: 175 IRMEGFLVPDYFHLYPKFLEMMIPRI----KEGKIVYVEDKAEGLESAPAALVGLFSGRN 230
           I + G     Y    P+ L   +  +     EGKI         LE A  AL  L   + 
Sbjct: 257 ISVVGVYWGAYARREPELLRANLAELFDLLAEGKIRPHVSAVFPLEQAAEALRALADRKA 316

Query: 231 VGKQVVE 237
            GK V+ 
Sbjct: 317 TGKVVLT 323

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase

 Score = 73.9 bits (182), Expect = 8e-17
 Identities = 33/138 (23%), Positives = 60/138 (43%), Gaps = 11/138 (7%)

Query: 63  AVGQLVGQFAKLVG-CYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFP-E 120
            VG    Q AK +G   V+    S++K++L K + G D   NY++E D    ++      
Sbjct: 1   GVGLAAVQLAKALGAARVIAVDRSEEKLELAK-ELGADHVINYRDE-DFVERVRELTGGR 58

Query: 121 GINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEG 179
           G+++  + VG    L+  L  +R  GR+ + G+        P        L+ K + + G
Sbjct: 59  GVDVVIDCVGAPATLEQALELLRPGGRVVVVGLPGGAPVPFPLRD-----LLLKELTILG 113

Query: 180 FLVPDYFHLYPKFLEMMI 197
            L       + + LE++ 
Sbjct: 114 SLGGGREE-FEEALELLA 130

Length = 131

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 77.3 bits (191), Expect = 1e-16
 Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 19/210 (9%)

Query: 32  LGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDL 91
           L + G+TA     +    K G+ V ++ ASG VG    Q AK +G +V G   ++   +L
Sbjct: 124 LPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGAHVTGVCSTR-NAEL 182

Query: 92  LKNKFGFDEAFNYKEEP--DLDAALKRYFPEGINIYFENVGGKMLDAV--LLNMRIQGR- 146
           +++  G DE  +Y  E    L A  ++Y     ++ F+ VG          L ++  GR 
Sbjct: 183 VRS-LGADEVIDYTTEDFVALTAGGEKY-----DVIFDAVGNSPFSLYRASLALKPGGRY 236

Query: 147 ITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIV 206
           +++ G  S         +  LT     R R++ FL         +  E++    +EGK+ 
Sbjct: 237 VSVGGGPSGLLL--VLLLLPLTLGGGGR-RLKFFLAKPNAEDLEQLAELV----EEGKLK 289

Query: 207 YVEDKAEGLESAPAALVGLFSGRNVGKQVV 236
            V D    LE AP A   L SGR  GK V+
Sbjct: 290 PVIDSVYPLEDAPEAYRRLKSGRARGKVVI 319

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR)

 Score = 76.7 bits (190), Expect = 2e-16
 Identities = 45/150 (30%), Positives = 77/150 (51%), Gaps = 5/150 (3%)

Query: 6   EYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVG 65
           EY +V A RL K+    +       +L + G+TA+    E    K G+ V V AA+G VG
Sbjct: 93  EYRVVPASRLVKLP-DGISDETAAALL-LQGLTAHYLLRETYPVKPGDTVLVHAAAGGVG 150

Query: 66  QLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRY-FPEGINI 124
            L+ Q+AK +G  V+G+  S++K +L +   G D   NY++E D    ++      G+++
Sbjct: 151 LLLTQWAKALGATVIGTVSSEEKAELARAA-GADHVINYRDE-DFVERVREITGGRGVDV 208

Query: 125 YFENVGGKMLDAVLLNMRIQGRITLCGMIS 154
            ++ VG    +  L ++R +G +   G  S
Sbjct: 209 VYDGVGKDTFEGSLDSLRPRGTLVSFGNAS 238

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320

>gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 75.7 bits (187), Expect = 5e-16
 Identities = 49/210 (23%), Positives = 85/210 (40%), Gaps = 19/210 (9%)

Query: 36  GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK 95
           G+TA+ G  +  + + G+ V +   +G VG +  Q AK  G  V  +A S +K    +  
Sbjct: 129 GITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGARVYATASS-EKAAFAR-S 186

Query: 96  FGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQ 155
            G D    Y+E    +   +     G ++ F+ VGG+ LDA    + + GR+      + 
Sbjct: 187 LGADPIIYYRETVV-EYVAEHTGGRGFDVVFDTVGGETLDASFEAVALYGRVVSILGGAT 245

Query: 156 YNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHL------YPKFLEMMIPRIKEGKI-VYV 208
                    H+L  L  +     G               + + L      ++ G++   +
Sbjct: 246 ---------HDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVERGQLRPLL 296

Query: 209 EDKAEGLESAPAALVGLFSGRNVGKQVVEV 238
           + +   LE A AA   L SG   GK V++V
Sbjct: 297 DPRTFPLEEAAAAHARLESGSARGKIVIDV 326

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326

>gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 74.5 bits (184), Expect = 1e-15
 Identities = 56/204 (27%), Positives = 83/204 (40%), Gaps = 13/204 (6%)

Query: 36  GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK 95
           G+TA+   F +   K G+ V V    G V     QFAK  G  V+ ++ S +K++  K  
Sbjct: 145 GLTAWNALFGLGPLKPGDTVLVQGTGG-VSLFALQFAKAAGARVIATSSSDEKLERAK-A 202

Query: 96  FGFDEAFNYKEEPDLDAALKRYFP-EGINIYFENVGGKMLDAVLLNMRIQGRITLCGMIS 154
            G D   NY+  PD    + +     G++   E  G   L   +  +   G I+L G +S
Sbjct: 203 LGADHVINYRTTPDWGEEVLKLTGGRGVDHVVEVGGPGTLAQSIKAVAPGGVISLIGFLS 262

Query: 155 QYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEG 214
                  E    L  L++K   + G  V           E M   I+  +I  V D+   
Sbjct: 263 -----GFEAPVLLLPLLTKGATLRGIAVGSRAQ-----FEAMNRAIEAHRIRPVIDRVFP 312

Query: 215 LESAPAALVGLFSGRNVGKQVVEV 238
            E A  A   L SG + GK V+ V
Sbjct: 313 FEEAKEAYRYLESGSHFGKVVIRV 336

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336

>gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 73.8 bits (182), Expect = 2e-15
 Identities = 51/226 (22%), Positives = 83/226 (36%), Gaps = 47/226 (20%)

Query: 35  PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN 94
            G+TAY   F+    + G  + ++  +G VG    Q AK  G  V+ +  SK   + +K 
Sbjct: 125 AGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGLRVITTC-SKRNFEYVK- 182

Query: 95  KFGFDEAFNYKEEPDLDAALKRYF-PEGINIYFENVGG----KMLDAVLLNMR---IQGR 146
             G D   +Y +E D+   +K      G++   + VGG     +   +  N     IQGR
Sbjct: 183 SLGADHVIDYNDE-DVCERIKEITGGRGVDAVLDTVGGETAAALAPTLAFNGHLVCIQGR 241

Query: 147 ITLCGMISQYNNDKPEG----VHNLTCLIS----------KRIRMEGFLVPDYFHLYPKF 192
                     + D P      VH +  L +          + +R  G             
Sbjct: 242 PD-------ASPDPPFTRALSVHEV-ALGAAHDHGDPAAWQDLRYAG------------- 280

Query: 193 LEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 238
            E ++  +  GK+  +  +    E  P AL  L      GK VV +
Sbjct: 281 -EELLELLAAGKLEPLVIEVLPFEQLPEALRALKDRHTRGKIVVTI 325

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325

>gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 73.8 bits (182), Expect = 2e-15
 Identities = 66/251 (26%), Positives = 106/251 (42%), Gaps = 20/251 (7%)

Query: 3   GWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASG 62
           G+ E   V A ++F +    M          +  +TAY   FE+ + + G+ V V +A+G
Sbjct: 92  GYAEVVNVPADQVFPLPD-GMSFEEAAAFP-VNYLTAYYALFELGNLRPGQSVLVHSAAG 149

Query: 63  AVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEG 121
            VG   GQ  K V    VVG+A S  K + LK   G     +Y+ + D    +K+  PEG
Sbjct: 150 GVGLAAGQLCKTVPNVTVVGTA-SASKHEALKEN-GVTHVIDYRTQ-DYVEEVKKISPEG 206

Query: 122 INIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVH-----------NLTCL 170
           ++I  + +GG+        ++  GR+ + G  +    +K                +   L
Sbjct: 207 VDIVLDALGGEDTRKSYDLLKPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKL 266

Query: 171 ISKRIRMEGFLVPDYFHLYPKFLEMMIPRIK---EGKIVYVEDKAEGLESAPAALVGLFS 227
           IS+   + GF +   F       E+M   +K   EGKI    D     E    A+  L S
Sbjct: 267 ISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKPKIDSVFPFEEVGEAMRRLQS 326

Query: 228 GRNVGKQVVEV 238
            +N+GK V+  
Sbjct: 327 RKNIGKVVLTP 337

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family

 Score = 71.9 bits (177), Expect = 1e-14
 Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 13/208 (6%)

Query: 37  MTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF 96
            T ++  F+    K GE V +   +  +G    Q AK  G  V  +AGS +K        
Sbjct: 125 FTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCA-ACEAL 183

Query: 97  GFDEAFNYKEEPDLDAALKRYFP-EGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQ 155
           G D A NY+EE D    +K     +G+++  + VGG  L+  +  + + GRI   G    
Sbjct: 184 GADIAINYREE-DFVEVVKAETGGKGVDVILDIVGGSYLNRNIKALALDGRIVQIGFQ-- 240

Query: 156 YNNDKPEGVHNLTCLISKRIRMEGFLV---PDYFH--LYPKFLEMMIPRIKEGKIVYVED 210
                 +   +L  L++KR+ + G  +   P      +  +  E + P +  G++  V D
Sbjct: 241 ---GGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRPVID 297

Query: 211 KAEGLESAPAALVGLFSGRNVGKQVVEV 238
           K   LE A  A   + SG ++GK V+ V
Sbjct: 298 KVFPLEDAAQAHALMESGDHIGKIVLTV 325

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325

>gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional

 Score = 69.3 bits (170), Expect = 9e-14
 Identities = 55/242 (22%), Positives = 98/242 (40%), Gaps = 13/242 (5%)

Query: 3   GWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASG 62
           G+ EY++     +  I            I     +TA+    +    K+G+ V + A + 
Sbjct: 94  GYAEYAVAHKGHVMHIP-QGYTFEEAAAIPEA-FLTAWQLLKKHGDVKKGQSVLIHAGAS 151

Query: 63  AVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYF-PEG 121
            VG    Q A+  G   + +  S++KVD  K          Y +E      +K+    +G
Sbjct: 152 GVGTAAAQLAEKYGAATIITTSSEEKVDFCKK-LAAIILIRYPDEEGFAPKVKKLTGEKG 210

Query: 122 INIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFL 181
           +N+  + VGG  L      + + G+  + G +     +K     NL  L+ KR  +    
Sbjct: 211 VNLVLDCVGGSYLSETAEVLAVDGKWIVYGFMGGAKVEKF----NLLPLLRKRASIIFST 266

Query: 182 V---PDYF--HLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVV 236
           +    D +   L   F   ++P ++EG+I  + D+   LE    A   L   +N+GK V+
Sbjct: 267 LRSRSDEYKADLVASFEREVLPYMEEGEIKPIVDRTYPLEEVAEAHTFLEQNKNIGKVVL 326

Query: 237 EV 238
            V
Sbjct: 327 TV 328

Length = 334

>gnl|CDD|176213 cd08251, polyketide_synthase, polyketide synthase

 Score = 68.2 bits (167), Expect = 2e-13
 Identities = 52/217 (23%), Positives = 85/217 (39%), Gaps = 35/217 (16%)

Query: 36  GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK 95
            +T    F       +GE++ +  A+G  G +  Q A+L G  +  +A S DK++ LK +
Sbjct: 106 FLTVIDAF-ARAGLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDKLEYLK-Q 163

Query: 96  FGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNM----RIQ------- 144
            G     NY EE D +  + R             GG+ +D V +N      IQ       
Sbjct: 164 LGVPHVINYVEE-DFEEEIMRL-----------TGGRGVDVV-INTLSGEAIQKGLNCLA 210

Query: 145 --GR---ITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPR 199
             GR   I +  + S  + D    + N     S  +R    L P++   Y      M+  
Sbjct: 211 PGGRYVEIAMTALKSAPSVDL-SVLSNNQSFHSVDLRKLLLLDPEFIADY---QAEMVSL 266

Query: 200 IKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVV 236
           ++EG++     +    +    A   L    N+GK VV
Sbjct: 267 VEEGELRPTVSRIFPFDDIGEAYRYLSDRENIGKVVV 303

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 303

>gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 68.0 bits (167), Expect = 2e-13
 Identities = 53/212 (25%), Positives = 87/212 (41%), Gaps = 13/212 (6%)

Query: 32  LGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDL 91
           L M  +TAY    E+   + G+ V ++AAS +VG    Q A   G  V+ +  + +K D 
Sbjct: 125 LWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDA 184

Query: 92  LKNKFGFDEAFNYKEEPDLDAALKRY-FPEGINIYFENVGGKMLDAVLLNMRIQGRITLC 150
           L    G        EE DL A + R    +G+++ F+ VGG     +   +   G + + 
Sbjct: 185 LLAL-GAAHVIVTDEE-DLVAEVLRITGGKGVDVVFDPVGGPQFAKLADALAPGGTLVVY 242

Query: 151 GMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKE----GKIV 206
           G +S      P         + K +   G+ + +   L P+     I  I +    G + 
Sbjct: 243 GALSGEPTPFPLKAA-----LKKSLTFRGYSLDE-ITLDPEARRRAIAFILDGLASGALK 296

Query: 207 YVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 238
            V D+    +    A   L SG+ +GK VV  
Sbjct: 297 PVVDRVFPFDDIVEAHRYLESGQQIGKIVVTP 328

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score = 65.4 bits (160), Expect = 2e-12
 Identities = 62/235 (26%), Positives = 93/235 (39%), Gaps = 21/235 (8%)

Query: 3   GWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASG 62
           G+ EY  V    L K+   ++       +      TA          K+G+ V V+ A G
Sbjct: 117 GFAEYVKVPERSLVKL-PDNVSDESAA-LAACVVGTAVHALK-RAGVKKGDTVLVTGAGG 173

Query: 63  AVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGI 122
            VG    Q AK +G  V+    S +K+ +LK           K   D+          G 
Sbjct: 174 GVGIHAIQLAKALGARVIAVTRSPEKLKILKELGADYVIDGSKFSEDVKKLG------GA 227

Query: 123 NIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVH-NLTCLISKRIRMEGFL 181
           ++  E VG   ++  L ++   GR+ L G      N  P+        LI K IR+ G +
Sbjct: 228 DVVIELVGSPTIEESLRSLNKGGRLVLIG------NVTPDPAPLRPGLLILKEIRIIGSI 281

Query: 182 VPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVV 236
                      +E  +  +KEGKI  V D+   LE    AL  L SG+ VG+ V+
Sbjct: 282 SAT-----KADVEEALKLVKEGKIKPVIDRVVSLEDINEALEDLKSGKVVGRIVL 331

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|176206 cd08244, MDR_enoyl_red, Possible enoyl reductase

 Score = 60.1 bits (146), Expect = 1e-10
 Identities = 38/123 (30%), Positives = 57/123 (46%), Gaps = 2/123 (1%)

Query: 32  LGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDL 91
           +   G TA  G  ++ +   G+ V V+AA+G +G L+ Q AK  G  VVG+AG   K  L
Sbjct: 124 VVHDGRTA-LGLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTAL 182

Query: 92  LKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCG 151
           ++   G D A +Y      D   +     G+ +  + VGG +  A L  +   GR    G
Sbjct: 183 VR-ALGADVAVDYTRPDWPDQVREALGGGGVTVVLDGVGGAIGRAALALLAPGGRFLTYG 241

Query: 152 MIS 154
             S
Sbjct: 242 WAS 244

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176183 cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putative quinone oxidoreductases

 Score = 59.9 bits (146), Expect = 1e-10
 Identities = 57/226 (25%), Positives = 90/226 (39%), Gaps = 41/226 (18%)

Query: 31  ILGMPGMTAYAGFFE----VCSPKQGEYVFVSAASGAVGQL-VGQFAKLVGCYVVGSAGS 85
           ILG  G TA            +P+ G  V V+ A+G VG + V   AKL G  VV   G 
Sbjct: 123 ILGTAGFTAALSVHRLEDNGQTPEDGP-VLVTGATGGVGSIAVAILAKL-GYTVVALTGK 180

Query: 86  KDKVDLLKNKFGFDEAFNYKE-EPDLDAAL-KRYFPEGINIYFENVGGKMLDAVLLNMRI 143
           +++ D LK   G  E  + ++   +    L K  +   I    + VGG +L  +L   + 
Sbjct: 181 EEQADYLK-SLGASEVLDREDLLDESKKPLLKARWAGAI----DTVGGDVLANLLKQTKY 235

Query: 144 QGRITLCGMISQYNNDK---P---EGVHNL-----TCLISKRIRMEGFLVPDYFHLYPKF 192
            G +  CG  +         P    GV  L      C +  R ++   L  +     P  
Sbjct: 236 GGVVASCGNAAGPELTTTVLPFILRGVSLLGIDSVNCPMELRKQVWQKLATE---WKPDL 292

Query: 193 LEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 238
           LE++              +   LE  P A+  L +G++ G+ VV++
Sbjct: 293 LEIV-------------VREISLEELPEAIDRLLAGKHRGRTVVKI 325

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like

 Score = 56.5 bits (137), Expect = 2e-09
 Identities = 52/236 (22%), Positives = 92/236 (38%), Gaps = 15/236 (6%)

Query: 4   WEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGA 63
           W+EY +  A  L  +    +       +   P +TA+    E      G++V  +AA+ A
Sbjct: 93  WQEYVVAPADDLIPVP-DSISDEQAAMLYINP-LTAWLMLTEYLKLPPGDWVIQNAANSA 150

Query: 64  VGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALK-RYFPEGI 122
           VG+++ Q AKL+G   +      ++V+ LK   G DE  +     DL   +K      G 
Sbjct: 151 VGRMLIQLAKLLGFKTINVVRRDEQVEELKAL-GADEVIDS-SPEDLAQRVKEATGGAGA 208

Query: 123 NIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLV 182
            +  + VGG+    +  ++R  G +   G++S      P      +  I K I + GF +
Sbjct: 209 RLALDAVGGESATRLARSLRPGGTLVNYGLLS--GEPVP---FPRSVFIFKDITVRGFWL 263

Query: 183 PDYFH-----LYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGK 233
             + H        +    +I  ++ G +         LE    A+         GK
Sbjct: 264 RQWLHSATKEAKQETFAEVIKLVEAGVLTTPVGAKFPLEDFEEAVAAAEQPGRGGK 319

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323

>gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase

 Score = 55.3 bits (134), Expect = 4e-09
 Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 9/78 (11%)

Query: 23  MPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGS 82
           +P++Y         +TAY    ++   ++GE V + AA+G VGQ   Q A+ +G  V  +
Sbjct: 89  LPVAY---------LTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFAT 139

Query: 83  AGSKDKVDLLKNKFGFDE 100
            GS++K + L+   G  +
Sbjct: 140 VGSEEKREFLRELGGPVD 157

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293

>gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 55.4 bits (134), Expect = 5e-09
 Identities = 65/243 (26%), Positives = 97/243 (39%), Gaps = 35/243 (14%)

Query: 3   GWEEYSLVTAPRLFKIQH--TD-----MPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYV 55
           G+ EY++V A   + +    +D      P SY T       M   AG         GE V
Sbjct: 132 GFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTA----ENMLERAGV------GAGETV 181

Query: 56  FVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALK 115
            V+ ASG VG  + Q AK  G  V+  AG   K + ++   G D     ++ P L  A K
Sbjct: 182 LVTGASGGVGSALVQLAKRRGAIVIAVAG-AAKEEAVR-ALGAD-TVILRDAPLLADA-K 237

Query: 116 RYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRI 175
               E +++  + VGG +   +L  +R  GR    G I+      P    +L  L  K +
Sbjct: 238 ALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAIA-----GPVVELDLRTLYLKDL 292

Query: 176 RMEG--FLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGK 233
            + G      + F         ++  I+EG+I  V  K   L     A       R+VGK
Sbjct: 293 TLFGSTLGTREVF-------RRLVRYIEEGEIRPVVAKTFPLSEIREAQAEFLEKRHVGK 345

Query: 234 QVV 236
            V+
Sbjct: 346 LVL 348

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350

>gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR)

 Score = 54.9 bits (133), Expect = 7e-09
 Identities = 62/260 (23%), Positives = 99/260 (38%), Gaps = 48/260 (18%)

Query: 4   WEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAY---AGFFEVCSPKQGEYVFVSAA 60
           W  +++V A  L K+ +   P       L +   TAY     F      + G++V  + A
Sbjct: 101 WRTHAVVPADDLIKVPNDVDPEQA--ATLSVNPCTAYRLLEDF---VKLQPGDWVIQNGA 155

Query: 61  SGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAA--LK 115
           + AVGQ V Q AKL+G   +     +  ++ LK      G D     +E   L A   LK
Sbjct: 156 NSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVLTEEELRSLLATELLK 215

Query: 116 RYFPEGINIYFENVGGKMLDAVLLNMRIQGR----ITLCGMISQYNNDKPEGVHNLTCLI 171
                   +    VGGK   +     R+       +T  GM     + +P  V   + LI
Sbjct: 216 SAPGGRPKLALNCVGGK---SATELARLLSPGGTMVTYGGM-----SGQPVTV-PTSLLI 266

Query: 172 SKRIRMEGFLVPDYF---------HLYPKFLEMMIPRIKEGKIVYV------EDKAEGLE 216
            K I + GF +  +           +  +  E++    +EGK+         +D  E  +
Sbjct: 267 FKDITLRGFWLTRWLKRANPEEKEDMLEELAELI----REGKLKAPPVEKVTDDPLEEFK 322

Query: 217 SAPAALVGLFSGRNVGKQVV 236
            A A  +    G   GKQV+
Sbjct: 323 DALANALKGGGG---GKQVL 339

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341

>gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase

 Score = 52.8 bits (128), Expect = 3e-08
 Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)

Query: 38  TAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFG 97
           TAY    ++   + GE V + AA+G VGQ   Q A+ +G  V  +AGS +K D L+   G
Sbjct: 90  TAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLARHLGAEVFATAGSPEKRDFLRA-LG 148

Query: 98  FDEA 101
             + 
Sbjct: 149 IPDD 152

Enoylreductase in Polyketide synthases. Length = 287

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score = 52.6 bits (127), Expect = 4e-08
 Identities = 62/239 (25%), Positives = 102/239 (42%), Gaps = 21/239 (8%)

Query: 3   GWEEYSLVTAPRLFKI-QHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAAS 61
           G+ EY +V A  + KI +  D+        L   G+T Y    +  + K G++V V  A 
Sbjct: 121 GYAEYVVVPARYVVKIPEGLDL---AEAAPLLCAGITTYRALKKA-NVKPGKWVAVVGA- 175

Query: 62  GAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEG 121
           G +G +  Q+AK +G  V+    S++K++L K K G D   N  +   L+A       E 
Sbjct: 176 GGLGHMAVQYAKAMGAEVIAITRSEEKLELAK-KLGADHVINSSDSDALEAV-----KEI 229

Query: 122 INIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFL 181
            +   + VG   L+  L  +R  G + L G+        P  +     LI K I + G L
Sbjct: 230 ADAIIDTVGPATLEPSLKALRRGGTLVLVGLPGG----GPIPLLPAFLLILKEISIVGSL 285

Query: 182 VPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVAT 240
           V          LE  +    EGKI     +   L+    A   +  G+  G+ V+++++
Sbjct: 286 V-----GTRADLEEALDFAAEGKIKPEILETIPLDEINEAYERMEKGKVRGRAVIDMSS 339

Length = 339

>gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like

 Score = 52.2 bits (126), Expect = 5e-08
 Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 13/96 (13%)

Query: 32  LGMPGMTAYAGFF----------EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVG 81
           L +  +TA    F          +     +G+ V +   S +VG L  Q AKL G  V+ 
Sbjct: 125 LPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVIT 184

Query: 82  SAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRY 117
           +A  K+  DL+K   G D  F+Y  +PD+   ++  
Sbjct: 185 TASPKNF-DLVK-SLGADAVFDYH-DPDVVEDIRAA 217

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339

>gnl|CDD|234026 TIGR02823, oxido_YhdH, putative quinone oxidoreductase, YhdH/YhfP family

 Score = 50.6 bits (122), Expect = 2e-07
 Identities = 60/227 (26%), Positives = 92/227 (40%), Gaps = 44/227 (19%)

Query: 31  ILGMPGMTAYAGFFEV----CSPKQGEYVFVSAASGAVGQL-VGQFAKLVGCYVVGSAGS 85
            LG  G TA      +     +P+ G  V V+ A+G VG L V   +KL G  VV S G 
Sbjct: 122 ALGTAGFTAALSVMALERNGLTPEDGP-VLVTGATGGVGSLAVAILSKL-GYEVVASTGK 179

Query: 86  KDKVDLLKNKFGFDEAFNYKE-EPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQ 144
            ++ D LK + G  E  + ++  P      K  +   +    + VGG  L  VL  ++  
Sbjct: 180 AEEEDYLK-ELGASEVIDREDLSPPGKPLEKERWAGAV----DTVGGHTLANVLAQLKYG 234

Query: 145 GRITLCGMISQYNNDKPE-------------GVHNLTCLISKRIRMEGFLVPDYFHLYPK 191
           G +  CG+      D P              G+ ++ C ++ R      L  D   L P+
Sbjct: 235 GAVAACGLAG--GPDLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATD---LKPR 289

Query: 192 FLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 238
            LE +   I              LE  P AL  + +G++ G+ VV+V
Sbjct: 290 NLESITREI-------------TLEELPEALEQILAGQHRGRTVVDV 323

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc [Unknown function, Enzymes of unknown specificity]. Length = 323

>gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR)

 Score = 49.9 bits (120), Expect = 3e-07
 Identities = 36/155 (23%), Positives = 69/155 (44%), Gaps = 12/155 (7%)

Query: 3   GWEEYSLVTAPRLFKIQHTDMPLSYYTGILG-MPGM--TAYAGFFEVCSPKQGEYVFVSA 59
            + EY+LV   +++ I  +D+  +     L  +P    TA+   F     + G+ + +  
Sbjct: 96  SYAEYTLVPNEQVYAI-DSDLSWA----ELAALPETYYTAWGSLFRSLGLQPGDTLLIRG 150

Query: 60  ASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFP 119
            + +VG    + AK +G  V  +  S ++  LLK + G DE     ++  +   L+   P
Sbjct: 151 GTSSVGLAALKLAKALGATVTATTRSPERAALLK-ELGADEVV--IDDGAIAEQLRAA-P 206

Query: 120 EGINIYFENVGGKMLDAVLLNMRIQGRITLCGMIS 154
            G +   E VG   L   L ++R  G + + G++ 
Sbjct: 207 GGFDKVLELVGTATLKDSLRHLRPGGIVCMTGLLG 241

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320

>gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional

 Score = 48.9 bits (117), Expect = 6e-07
 Identities = 51/193 (26%), Positives = 79/193 (40%), Gaps = 28/193 (14%)

Query: 50  KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD----EAFNYK 105
           K+GE V V+ A G VG    Q AK +G  V+    S+ K  ++  K+         F+  
Sbjct: 161 KKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVS-KYADYVIVGSKFS-- 217

Query: 106 EEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVH 165
           EE      +K+    G +I  E VG   L+  L ++ + G+I   G      N  P   +
Sbjct: 218 EE------VKKI--GGADIVIETVGTPTLEESLRSLNMGGKIIQIG------NVDPSPTY 263

Query: 166 NLTC--LISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALV 223
           +L    +I K I + G +         + +E  +  + EGKI  V      L     AL 
Sbjct: 264 SLRLGYIILKDIEIIGHISAT-----KRDVEEALKLVAEGKIKPVIGAEVSLSEIDKALE 318

Query: 224 GLFSGRNVGKQVV 236
            L     +GK +V
Sbjct: 319 ELKDKSRIGKILV 331

Length = 334

>gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

 Score = 48.5 bits (116), Expect = 1e-06
 Identities = 54/226 (23%), Positives = 88/226 (38%), Gaps = 20/226 (8%)

Query: 3   GWEEYSLVTAPRLFKIQHTDMPLSYYTGILGM---PGMTAYAGFFEVCSPKQGEYVFVSA 59
           G+ EY  V A          +              P  TAY G  E  + + G  V V  
Sbjct: 122 GFAEYVRVPADFNLAKLPDGIDE-----EAAALTEPLATAYHGHAERAAVRPGGTVVVVG 176

Query: 60  ASGAVGQLVGQFAKLVGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYF 118
           A G +G L    AKL+G   V+    S ++++L K   G D   N  E+      L+   
Sbjct: 177 A-GPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSEDDAGAEILELTG 235

Query: 119 PEGINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRM 177
             G ++  E VG    LD  L  +R  G + + G+    +   P G+     ++SK + +
Sbjct: 236 GRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGL-----VVSKELTL 290

Query: 178 EGFLVPDYFHLYPKFLEMM-IPRIKEGKIVYVEDKAEGLESAPAAL 222
            G L P     + + L+++   +I   K++        L+ A  A 
Sbjct: 291 RGSLRPSGREDFERALDLLASGKIDPEKLI---THRLPLDDAAEAY 333

Length = 350

>gnl|CDD|176231 cd08270, MDR4, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 47.0 bits (112), Expect = 2e-06
 Identities = 30/123 (24%), Positives = 47/123 (38%), Gaps = 11/123 (8%)

Query: 32  LGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDL 91
           L + G+TA         P  G  V V+ ASG VG+   Q A L G +VV   GS  + + 
Sbjct: 114 LPVAGVTALRALRRG-GPLLGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEG 172

Query: 92  LKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCG 151
           L+     +            +         +++  ++VGG  L   L  +   G +   G
Sbjct: 173 LRELGAAEVV----VGGSELS------GAPVDLVVDSVGGPQLARALELLAPGGTVVSVG 222

Query: 152 MIS 154
             S
Sbjct: 223 SSS 225

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 305

>gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family

 Score = 46.6 bits (111), Expect = 4e-06
 Identities = 38/154 (24%), Positives = 61/154 (39%), Gaps = 6/154 (3%)

Query: 1   MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAA 60
           M G  EY++V A  L  +    +     + +LG  G TAY         + GE V V   
Sbjct: 139 MGGLAEYAVVPATALAPLP-ESLDY-TESAVLGCAGFTAYGALKHAADVRPGETVAVIGV 196

Query: 61  SGAVGQLVGQFAKLVGCYVVGSAG-SKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFP 119
            G VG    Q AK  G   + +     +K+   K + G     N  +E  + A  +    
Sbjct: 197 -GGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAK-ELGATHTVNAAKEDAVAAIREITGG 254

Query: 120 EGINIYFENVGG-KMLDAVLLNMRIQGRITLCGM 152
            G+++  E +G  +     L  +R  GR  + G+
Sbjct: 255 RGVDVVVEALGKPETFKLALDVVRDGGRAVVVGL 288

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367

>gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family

 Score = 46.2 bits (110), Expect = 5e-06
 Identities = 44/153 (28%), Positives = 62/153 (40%), Gaps = 20/153 (13%)

Query: 3   GWEEYSLVTAPRLFKIQHTDMPLSYYTGI---LGMPGMTAYAGFFEV-CSPKQGEYVFVS 58
           G+ EY +V    LFKI     P S    +   L +  +TAY         P  GE V V 
Sbjct: 117 GYAEYIVVPEKNLFKI-----PDSISDELAASLPVAALTAYHALKTAGLGP--GETVVVF 169

Query: 59  AASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYF 118
            ASG  G    Q AK++G  V+  +        LK +FG DE  +Y E  +    + +  
Sbjct: 170 GASGNTGIFAVQLAKMMGAEVIAVSRKDW----LK-EFGADEVVDYDEVEEKVKEITKMA 224

Query: 119 PEGINIYFENVGGKMLDAVLLNMRIQGRITLCG 151
              IN    ++G    D  L  +   GR+   G
Sbjct: 225 DVVIN----SLGSSFWDLSLSVLGRGGRLVTFG 253

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 44.9 bits (107), Expect = 1e-05
 Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 16/91 (17%)

Query: 3   GWEEYSLVTAPRLFKI-QHTD------MPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYV 55
           G  EY  + A  L  + +  D      + L+Y         +TAY           G+ V
Sbjct: 93  GNAEYINLDAKYLVPVPEGVDAAEAVCLVLNY---------VTAYQMLHRAAKVLTGQRV 143

Query: 56  FVSAASGAVGQLVGQFAKLVGCYVVGSAGSK 86
            +  ASG VGQ + + A L G  V G+A  +
Sbjct: 144 LIHGASGGVGQALLELALLAGAEVYGTASER 174

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331

>gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 43.7 bits (104), Expect = 3e-05
 Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 2/80 (2%)

Query: 36  GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK 95
           G+T Y    +    K G++V +S A G +G L  Q+AK +G  V+      +K++L K +
Sbjct: 151 GVTVYKAL-KKAGLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAK-E 208

Query: 96  FGFDEAFNYKEEPDLDAALK 115
            G D   ++K+  D++A  +
Sbjct: 209 LGADAFVDFKKSDDVEAVKE 228

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176249 cd08289, MDR_yhfp_like, Yhfp putative quinone oxidoreductases

 Score = 43.5 bits (103), Expect = 4e-05
 Identities = 38/128 (29%), Positives = 57/128 (44%), Gaps = 12/128 (9%)

Query: 31  ILGMPGMTA----YAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK 86
           ILG  G TA    +       +P+QG  V V+ A+G VG L       +G  VV S G  
Sbjct: 123 ILGTAGFTAALSIHRLEENGLTPEQGP-VLVTGATGGVGSLAVSILAKLGYEVVASTGKA 181

Query: 87  DKVDLLKNKFGFDEAFNYKEEPD--LDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQ 144
           D  D LK K G  E    +E  +  +    K+ +   +    + VGGK L  +L  ++  
Sbjct: 182 DAADYLK-KLGAKEVIPREELQEESIKPLEKQRWAGAV----DPVGGKTLAYLLSTLQYG 236

Query: 145 GRITLCGM 152
           G + + G+
Sbjct: 237 GSVAVSGL 244

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 326

>gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

 Score = 42.6 bits (101), Expect = 7e-05
 Identities = 54/233 (23%), Positives = 75/233 (32%), Gaps = 14/233 (6%)

Query: 6   EYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVG 65
           E  +V A  L  +      L      L     TA  G      P+ GE V V    G VG
Sbjct: 56  ERVVVPANLLVPL---PDGLPPERAALTALAATALNGV-RDAEPRLGERVAVVGL-GLVG 110

Query: 66  QLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIY 125
            L  Q AK  G   V        VD    +    EA     +P            G ++ 
Sbjct: 111 LLAAQLAKAAGAREV------VGVDPDAARRELAEALG-PADPVAADTADEIGGRGADVV 163

Query: 126 FENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVH-NLTCLISKRIRMEGFLVP 183
            E  G    L+  L  +R +GR+ L G          E  H     + S ++   G    
Sbjct: 164 IEASGSPSALETALRLLRDRGRVVLVGWYGLKPLLLGEEFHFKRLPIRSSQVYGIGRYDR 223

Query: 184 DYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVV 236
                  + LE  +  + EG++  +       E AP A   LF       +VV
Sbjct: 224 PRRWTEARNLEEALDLLAEGRLEALITHRVPFEDAPEAYRLLFEDPPECLKVV 276

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277

>gnl|CDD|182701 PRK10754, PRK10754, quinone oxidoreductase, NADPH-dependent; Provisional

 Score = 42.4 bits (100), Expect = 1e-04
 Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 1/72 (1%)

Query: 36  GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK 95
           G+T Y    +    K  E     AA+G VG +  Q+AK +G  ++G+ GS  K    K  
Sbjct: 125 GLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRAKKA 184

Query: 96  FGFDEAFNYKEE 107
            G  +  NY+EE
Sbjct: 185 -GAWQVINYREE 195

Length = 327

>gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

 Score = 41.8 bits (99), Expect = 2e-04
 Identities = 38/126 (30%), Positives = 52/126 (41%), Gaps = 5/126 (3%)

Query: 6   EYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVG 65
           EY++V    L KI   D PL     +LG    T           + G+ V V    G VG
Sbjct: 142 EYTVVHEISLVKIDP-DAPLEK-ACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGL-GGVG 198

Query: 66  QLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINI 124
               Q AK  G   ++    + +K++L K KFG     N KE  D+  A+      G + 
Sbjct: 199 LAAIQGAKAAGAGRIIAVDINPEKLELAK-KFGATHFVNPKEVDDVVEAIVELTDGGADY 257

Query: 125 YFENVG 130
            FE VG
Sbjct: 258 AFECVG 263

Length = 366

>gnl|CDD|176210 cd08248, RTN4I1, Human Reticulon 4 Interacting Protein 1

 Score = 41.1 bits (97), Expect = 3e-04
 Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 9/100 (9%)

Query: 36  GMTAYAGFFEVC----SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDL 91
           G+TA++    V         G+ V +   SG VG    Q  K  G +V  +  S D + L
Sbjct: 143 GLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTC-STDAIPL 201

Query: 92  LKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG 131
           +K   G D+  +Y  E D +  L        ++  + VGG
Sbjct: 202 VK-SLGADDVIDYNNE-DFEEELTER--GKFDVILDTVGG 237

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 350

>gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins

 Score = 40.8 bits (96), Expect = 3e-04
 Identities = 52/201 (25%), Positives = 78/201 (38%), Gaps = 18/201 (8%)

Query: 36  GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK 95
           G+T Y+       P+ GE V V    G +G L  Q+A+ +G   V    S DK +L + K
Sbjct: 148 GITVYSAL-RDAGPRPGERVAVLGI-GGLGHLAVQYARAMGFETVAITRSPDKRELAR-K 204

Query: 96  FGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQ 155
            G DE  +   E D  AA      + I +     G     A+   +R  GRI L G+   
Sbjct: 205 LGADEVVDSGAELDEQAAAGGA--DVI-LVTVVSGAAAEAALGG-LRRGGRIVLVGLPES 260

Query: 156 YNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGL 215
                P    ++  LI KR  + G       H     L+  +    EGK+     +   L
Sbjct: 261 -----PPFSPDIFPLIMKRQSIAG-----STHGGRADLQEALDFAAEGKVK-PMIETFPL 309

Query: 216 ESAPAALVGLFSGRNVGKQVV 236
           + A  A   +  G    + V+
Sbjct: 310 DQANEAYERMEKGDVRFRFVL 330

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330

>gnl|CDD|176251 cd08291, ETR_like_1, 2-enoyl thioester reductase (ETR) like proteins, child 1

 Score = 40.3 bits (95), Expect = 5e-04
 Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 12/154 (7%)

Query: 37  MTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF 96
           +TA  G  E    +  + V  +AA+ A+G+++ +  K  G  V+     K++VDLLK K 
Sbjct: 130 LTAL-GMLETAREEGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLK-KI 187

Query: 97  GFDEAFNYKEE---PDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 153
           G +   N  +     DL   + +       I+F+ VGG +   +LL M     + + G +
Sbjct: 188 GAEYVLNSSDPDFLEDLKELIAK---LNATIFFDAVGGGLTGQILLAMPYGSTLYVYGYL 244

Query: 154 SQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFH 187
           S       E + +   LI K   +EGF +  +  
Sbjct: 245 S---GKLDEPI-DPVDLIFKNKSIEGFWLTTWLQ 274

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family

 Score = 39.9 bits (94), Expect = 7e-04
 Identities = 43/209 (20%), Positives = 78/209 (37%), Gaps = 23/209 (11%)

Query: 37  MTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF 96
            TA+         K GE+V V    G VG      A  +G  V+      DK++L + + 
Sbjct: 151 ATAFRALVHQARVKPGEWVAVHGC-GGVGLSAVMIASALGARVIAVDIDDDKLELAR-EL 208

Query: 97  GFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKM-LDAVLLNMRIQGRITLCGMISQ 155
           G     N  E  D+ AA++     G ++  + +G        + ++R +GR    G+   
Sbjct: 209 GAVATVNASEVEDVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKRGRHVQVGL--- 265

Query: 156 YNNDKPEGVHNLTCL-----ISKRIRMEG-FLVPDYFHLYPKFLEMMIP-RIKEGKIVYV 208
                  G      L     +++ + + G   +P   H Y   L ++   ++    +V  
Sbjct: 266 -----TLGEEAGVALPMDRVVARELEIVGSHGMPA--HRYDAMLALIASGKLDPEPLVG- 317

Query: 209 EDKAEGLESAPAALVGLFSGRNVGKQVVE 237
             +   L+ AP AL  +      G  V+ 
Sbjct: 318 --RTISLDEAPDALAAMDDYATAGITVIT 344

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345

>gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

 Score = 38.8 bits (91), Expect = 0.001
 Identities = 37/146 (25%), Positives = 60/146 (41%), Gaps = 12/146 (8%)

Query: 36  GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK 95
            +T Y         K GE V V    G +G    Q AK +G  V+     ++K++L K +
Sbjct: 150 VLTPYHAVVRAGEVKPGETVLVIGL-GGLGLNAVQIAKAMGAAVIAVDIKEEKLELAK-E 207

Query: 96  FGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGK--MLDAVLLNMRIQGRITLCGMI 153
            G DE  N  ++   D         G ++ F+ VG +    DA    ++  GRI + G+ 
Sbjct: 208 LGADEVLNSLDDSPKDKKAAG-LGGGFDVIFDFVGTQPTFEDAQKA-VKPGGRIVVVGL- 264

Query: 154 SQYNNDKPEGVHNLTCLISKRIRMEG 179
                     V     LI++ +R+ G
Sbjct: 265 ----GRDKLTVDLSD-LIARELRIIG 285

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338

>gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family

 Score = 38.5 bits (90), Expect = 0.002
 Identities = 45/152 (29%), Positives = 62/152 (40%), Gaps = 7/152 (4%)

Query: 3   GWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASG 62
           G+ EY LV    L ++      LS     L  P   A     E    + G+ V V    G
Sbjct: 119 GFAEYVLVPEESLHELPEN---LSLEAAALTEPLAVAVHAVAERSGIRPGDTVVVFG-PG 174

Query: 63  AVGQLVGQFAKLVGCYVVGSAGSKDKVDL-LKNKFGFDEAFNYKEEPDLDAALKRYFPEG 121
            +G L  Q AKL G  VV     KD+V L +  + G D A N  EE   +   +    +G
Sbjct: 175 PIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKELGAD-AVNGGEEDLAELVNEITDGDG 233

Query: 122 INIYFENVGG-KMLDAVLLNMRIQGRITLCGM 152
            ++  E  G    L+  L  +R  GRI   G+
Sbjct: 234 ADVVIECSGAVPALEQALELLRKGGRIVQVGI 265

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306

>gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases

 Score = 37.6 bits (88), Expect = 0.004
 Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 5/105 (4%)

Query: 49  PKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEE 107
              G+ V V  A G +G L  Q+ K++G   V+      +K+ + + + G D+  N KEE
Sbjct: 157 ITLGDTVVVIGA-GTIGLLAIQWLKILGAKRVIAVDIDDEKLAVAR-ELGADDTINPKEE 214

Query: 108 PDLDAALKRYFPEGINIYFENVG-GKMLDAVLLNMRIQGRITLCG 151
            D++   +     G ++  E  G    ++  L   R  G++ L G
Sbjct: 215 -DVEKVRELTEGRGADLVIEAAGSPATIEQALALARPGGKVVLVG 258

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	241
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	100.0
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	100.0
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	100.0
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	100.0
COG2130	340	Putative NADP-dependent oxidoreductases [General f	100.0
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	100.0
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	100.0
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	100.0
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	100.0
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	100.0
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	100.0
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	100.0
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	100.0
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	100.0
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	100.0
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	100.0
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	100.0
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	100.0
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	100.0
PLN02827	378	Alcohol dehydrogenase-like	100.0
PLN02586	360	probable cinnamyl alcohol dehydrogenase	100.0
PLN02178	375	cinnamyl-alcohol dehydrogenase	100.0
KOG0022	375	consensus Alcohol dehydrogenase, class III [Second	100.0
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	100.0
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	100.0
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	100.0
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	99.98
PLN02740	381	Alcohol dehydrogenase-like	99.98
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	99.98
PLN02514	357	cinnamyl-alcohol dehydrogenase	99.98
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	99.98
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	99.97
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	99.97
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	99.97
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	99.97
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	99.97
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	99.97
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	99.97
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	99.97
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	99.97
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	99.97
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	99.97
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	99.97
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	99.97
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	99.97
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	99.97
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	99.97
PTZ00354	334	alcohol dehydrogenase; Provisional	99.96
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	99.96
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	99.96
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	99.96
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	99.96
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	99.96
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	99.96
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	99.96
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	99.96
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	99.96
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	99.96
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	99.96
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	99.96
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	99.96
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	99.96
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	99.96
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	99.96
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	99.96
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	99.96
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	99.96
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	99.96
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	99.96
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	99.96
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	99.96
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	99.96
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	99.95
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	99.95
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	99.95
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	99.95
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	99.95
PRK13771	334	putative alcohol dehydrogenase; Provisional	99.95
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	99.95
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	99.95
PRK10083	339	putative oxidoreductase; Provisional	99.95
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	99.95
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	99.95
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	99.95
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	99.95
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	99.95
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	99.95
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	99.95
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	99.95
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	99.95
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	99.95
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	99.95
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	99.95
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	99.95
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	99.95
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	99.95
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	99.95
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	99.95
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	99.95
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	99.95
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	99.95
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	99.95
cd08252	336	AL_MDR Arginate lyase and other MDR family members	99.95
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	99.94
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	99.94
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	99.94
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	99.94
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	99.94
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	99.94
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	99.94
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	99.93
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	99.93
PLN02702	364	L-idonate 5-dehydrogenase	99.93
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	99.93
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	99.93
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	99.93
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	99.93
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	99.93
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	99.93
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	99.93
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	99.93
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	99.92
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	99.92
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	99.91
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	99.91
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	99.9
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	99.85
PF13602	127	ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ	99.7
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	99.55
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	99.52
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	98.87
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	98.74
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	98.71
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	98.63
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	98.6
PLN02494	477	adenosylhomocysteinase	98.54
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	98.52
PRK08324	681	short chain dehydrogenase; Validated	98.48
PRK08306	296	dipicolinate synthase subunit A; Reviewed	98.45
COG0300	265	DltE Short-chain dehydrogenases of various substra	98.45
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	98.35
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.33
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	98.33
PRK12742	237	oxidoreductase; Provisional	98.31
PRK06182	273	short chain dehydrogenase; Validated	98.25
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.22
PRK08265	261	short chain dehydrogenase; Provisional	98.2
PRK05993	277	short chain dehydrogenase; Provisional	98.19
PRK05693	274	short chain dehydrogenase; Provisional	98.17
PRK05872	296	short chain dehydrogenase; Provisional	98.12
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	98.12
PLN03209	576	translocon at the inner envelope of chloroplast su	98.1
PRK06198	260	short chain dehydrogenase; Provisional	98.1
PRK07109	334	short chain dehydrogenase; Provisional	98.08
PTZ00075	476	Adenosylhomocysteinase; Provisional	98.08
PRK06057	255	short chain dehydrogenase; Provisional	98.07
PRK06139	330	short chain dehydrogenase; Provisional	98.04
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	98.03
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	98.03
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	98.01
COG2518	209	Pcm Protein-L-isoaspartate carboxylmethyltransfera	98.0
PRK07060	245	short chain dehydrogenase; Provisional	98.0
PRK12829	264	short chain dehydrogenase; Provisional	97.99
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.99
PRK07825	273	short chain dehydrogenase; Provisional	97.98
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	97.96
PRK06484	520	short chain dehydrogenase; Validated	97.96
PLN02780	320	ketoreductase/ oxidoreductase	97.96
PRK07806	248	short chain dehydrogenase; Provisional	97.96
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	97.95
PRK00517	250	prmA ribosomal protein L11 methyltransferase; Revi	97.95
PRK08339	263	short chain dehydrogenase; Provisional	97.94
PRK08017	256	oxidoreductase; Provisional	97.94
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	97.93
PRK07576	264	short chain dehydrogenase; Provisional	97.93
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.92
PRK06500	249	short chain dehydrogenase; Provisional	97.92
PRK07062	265	short chain dehydrogenase; Provisional	97.91
PRK12939	250	short chain dehydrogenase; Provisional	97.91
PRK05866	293	short chain dehydrogenase; Provisional	97.91
PRK07063	260	short chain dehydrogenase; Provisional	97.88
PRK08177	225	short chain dehydrogenase; Provisional	97.88
PRK05867	253	short chain dehydrogenase; Provisional	97.88
PRK06196	315	oxidoreductase; Provisional	97.87
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	97.87
PRK11705	383	cyclopropane fatty acyl phospholipid synthase; Pro	97.87
PRK06180	277	short chain dehydrogenase; Provisional	97.86
PRK07814	263	short chain dehydrogenase; Provisional	97.86
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.85
PRK07831	262	short chain dehydrogenase; Provisional	97.84
PRK12771	564	putative glutamate synthase (NADPH) small subunit;	97.84
PRK06949	258	short chain dehydrogenase; Provisional	97.84
PRK05854	313	short chain dehydrogenase; Provisional	97.84
PRK07478	254	short chain dehydrogenase; Provisional	97.83
PRK07832	272	short chain dehydrogenase; Provisional	97.83
PRK06841	255	short chain dehydrogenase; Provisional	97.82
PRK07890	258	short chain dehydrogenase; Provisional	97.82
PRK05884	223	short chain dehydrogenase; Provisional	97.81
PRK07326	237	short chain dehydrogenase; Provisional	97.81
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	97.8
PRK07024	257	short chain dehydrogenase; Provisional	97.8
PRK09186	256	flagellin modification protein A; Provisional	97.79
PRK05717	255	oxidoreductase; Validated	97.79
PRK08267	260	short chain dehydrogenase; Provisional	97.79
PRK06194	287	hypothetical protein; Provisional	97.78
PRK10538	248	malonic semialdehyde reductase; Provisional	97.78
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	97.78
PRK07453	322	protochlorophyllide oxidoreductase; Validated	97.77
PRK07523	255	gluconate 5-dehydrogenase; Provisional	97.77
PRK08340	259	glucose-1-dehydrogenase; Provisional	97.77
PRK05876	275	short chain dehydrogenase; Provisional	97.76
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.75
PRK09291	257	short chain dehydrogenase; Provisional	97.75
PLN02253	280	xanthoxin dehydrogenase	97.74
PRK07904	253	short chain dehydrogenase; Provisional	97.74
PRK12828	239	short chain dehydrogenase; Provisional	97.74
PRK06953	222	short chain dehydrogenase; Provisional	97.73
PRK08703	239	short chain dehydrogenase; Provisional	97.73
PRK06484	520	short chain dehydrogenase; Validated	97.73
PRK00377	198	cbiT cobalt-precorrin-6Y C(15)-methyltransferase;	97.73
PRK06197	306	short chain dehydrogenase; Provisional	97.73
CHL00194	317	ycf39 Ycf39; Provisional	97.72
PRK06482	276	short chain dehydrogenase; Provisional	97.72
PRK07677	252	short chain dehydrogenase; Provisional	97.72
PRK09072	263	short chain dehydrogenase; Provisional	97.71
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	97.7
PRK08589	272	short chain dehydrogenase; Validated	97.7
PRK09242	257	tropinone reductase; Provisional	97.7
PRK07067	257	sorbitol dehydrogenase; Provisional	97.7
PRK06128	300	oxidoreductase; Provisional	97.69
KOG0725	270	consensus Reductases with broad range of substrate	97.69
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	97.68
PRK06914	280	short chain dehydrogenase; Provisional	97.68
PRK07774	250	short chain dehydrogenase; Provisional	97.68
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	97.68
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	97.67
PRK08862	227	short chain dehydrogenase; Provisional	97.67
PRK08251	248	short chain dehydrogenase; Provisional	97.67
PRK08213	259	gluconate 5-dehydrogenase; Provisional	97.67
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	97.67
PF02353	273	CMAS: Mycolic acid cyclopropane synthetase; InterP	97.66
PRK08643	256	acetoin reductase; Validated	97.66
PRK08263	275	short chain dehydrogenase; Provisional	97.66
PRK07454	241	short chain dehydrogenase; Provisional	97.66
PRK06179	270	short chain dehydrogenase; Provisional	97.65
PRK06181	263	short chain dehydrogenase; Provisional	97.65
PRK08085	254	gluconate 5-dehydrogenase; Provisional	97.65
PRK06138	252	short chain dehydrogenase; Provisional	97.64
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.64
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.64
PRK06483	236	dihydromonapterin reductase; Provisional	97.64
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	97.63
PRK07035	252	short chain dehydrogenase; Provisional	97.63
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	97.63
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.63
PRK06172	253	short chain dehydrogenase; Provisional	97.62
PRK06720	169	hypothetical protein; Provisional	97.61
PRK05875	276	short chain dehydrogenase; Provisional	97.6
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	97.6
PRK08277	278	D-mannonate oxidoreductase; Provisional	97.59
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	97.59
PRK08628	258	short chain dehydrogenase; Provisional	97.58
PF11017	314	DUF2855: Protein of unknown function (DUF2855); In	97.58
PRK06125	259	short chain dehydrogenase; Provisional	97.58
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	97.57
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	97.57
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	97.57
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	97.57
PRK07074	257	short chain dehydrogenase; Provisional	97.57
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.56
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	97.55
PRK06124	256	gluconate 5-dehydrogenase; Provisional	97.55
PRK12937	245	short chain dehydrogenase; Provisional	97.54
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	97.54
COG4122	219	Predicted O-methyltransferase [General function pr	97.54
PRK12367	245	short chain dehydrogenase; Provisional	97.52
PRK04148	134	hypothetical protein; Provisional	97.52
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	97.52
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	97.52
PRK06101	240	short chain dehydrogenase; Provisional	97.52
PRK07985	294	oxidoreductase; Provisional	97.52
PRK07856	252	short chain dehydrogenase; Provisional	97.52
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	97.51
PRK06114	254	short chain dehydrogenase; Provisional	97.51
PRK07791	286	short chain dehydrogenase; Provisional	97.5
COG2910	211	Putative NADH-flavin reductase [General function p	97.5
COG2230	283	Cfa Cyclopropane fatty acid synthase and related m	97.49
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	97.49
PRK13943	322	protein-L-isoaspartate O-methyltransferase; Provis	97.49
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	97.49
PRK08226	263	short chain dehydrogenase; Provisional	97.48
PRK06398	258	aldose dehydrogenase; Validated	97.48
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	97.48
PRK07097	265	gluconate 5-dehydrogenase; Provisional	97.47
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	97.47
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	97.46
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	97.46
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	97.46
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	97.45
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	97.44
PRK12743	256	oxidoreductase; Provisional	97.43
PRK12747	252	short chain dehydrogenase; Provisional	97.43
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	97.43
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.43
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	97.42
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	97.42
PRK09135	249	pteridine reductase; Provisional	97.41
PRK07577	234	short chain dehydrogenase; Provisional	97.39
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.39
PRK07775	274	short chain dehydrogenase; Provisional	97.38
PRK08303	305	short chain dehydrogenase; Provisional	97.38
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	97.38
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	97.37
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	97.37
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	97.37
PRK05650	270	short chain dehydrogenase; Provisional	97.36
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	97.36
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	97.35
PRK06523	260	short chain dehydrogenase; Provisional	97.35
PRK06940	275	short chain dehydrogenase; Provisional	97.34
PRK08278	273	short chain dehydrogenase; Provisional	97.34
TIGR00406	288	prmA ribosomal protein L11 methyltransferase. Ribo	97.33
PRK13942	212	protein-L-isoaspartate O-methyltransferase; Provis	97.33
PRK07102	243	short chain dehydrogenase; Provisional	97.32
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	97.32
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	97.32
PRK08264	238	short chain dehydrogenase; Validated	97.32
PRK05599	246	hypothetical protein; Provisional	97.32
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	97.31
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	97.3
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.3
PF01135	209	PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl	97.28
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.27
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	97.27
PRK05855	582	short chain dehydrogenase; Validated	97.27
PRK07069	251	short chain dehydrogenase; Validated	97.25
PRK09134	258	short chain dehydrogenase; Provisional	97.25
COG2226	238	UbiE Methylase involved in ubiquinone/menaquinone	97.25
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.25
PRK12938	246	acetyacetyl-CoA reductase; Provisional	97.24
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.24
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	97.24
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	97.23
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	97.23
PLN00015	308	protochlorophyllide reductase	97.23
PRK08936	261	glucose-1-dehydrogenase; Provisional	97.23
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	97.22
PRK12746	254	short chain dehydrogenase; Provisional	97.22
COG2242	187	CobL Precorrin-6B methylase 2 [Coenzyme metabolism	97.22
PRK13944	205	protein-L-isoaspartate O-methyltransferase; Provis	97.21
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	97.21
PRK07201	657	short chain dehydrogenase; Provisional	97.21
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	97.2
TIGR02415	254	23BDH acetoin reductases. One member of this famil	97.2
TIGR00438	188	rrmJ cell division protein FtsJ.	97.19
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	97.17
KOG1208	314	consensus Dehydrogenases with different specificit	97.17
PRK08219	227	short chain dehydrogenase; Provisional	97.16
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	97.16
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	97.15
PRK06701	290	short chain dehydrogenase; Provisional	97.14
PLN02476	278	O-methyltransferase	97.14
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	97.13
PRK00107	187	gidB 16S rRNA methyltransferase GidB; Reviewed	97.12
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	97.12
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	97.09
PRK05447	385	1-deoxy-D-xylulose 5-phosphate reductoisomerase; P	97.08
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.07
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	97.07
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	97.07
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	97.07
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	97.07
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.06
PF01596	205	Methyltransf_3: O-methyltransferase; InterPro: IPR	97.06
PRK12935	247	acetoacetyl-CoA reductase; Provisional	97.05
PTZ00098	263	phosphoethanolamine N-methyltransferase; Provision	97.04
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.04
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.04
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	97.03
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.03
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.03
PRK11207	197	tellurite resistance protein TehB; Provisional	97.02
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	97.02
PRK12548	289	shikimate 5-dehydrogenase; Provisional	97.02
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.01
PRK07041	230	short chain dehydrogenase; Provisional	96.99
PRK08309	177	short chain dehydrogenase; Provisional	96.99
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	96.99
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.97
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.97
PLN02781	234	Probable caffeoyl-CoA O-methyltransferase	96.96
PLN00016	378	RNA-binding protein; Provisional	96.95
PRK07023	243	short chain dehydrogenase; Provisional	96.95
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	96.95
PLN03075	296	nicotianamine synthase; Provisional	96.94
TIGR02469	124	CbiT precorrin-6Y C5,15-methyltransferase (decarbo	96.94
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	96.91
TIGR00080	215	pimt protein-L-isoaspartate(D-aspartate) O-methylt	96.9
PRK08618	325	ornithine cyclodeaminase; Validated	96.9
PRK14982	340	acyl-ACP reductase; Provisional	96.9
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	96.9
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	96.89
PRK00811	283	spermidine synthase; Provisional	96.89
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.89
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	96.89
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	96.88
PRK06947	248	glucose-1-dehydrogenase; Provisional	96.87
COG2519	256	GCD14 tRNA(1-methyladenosine) methyltransferase an	96.87
PLN02589	247	caffeoyl-CoA O-methyltransferase	96.87
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	96.87
PRK07402	196	precorrin-6B methylase; Provisional	96.86
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	96.85
PLN02686	367	cinnamoyl-CoA reductase	96.85
PLN02366	308	spermidine synthase	96.83
PRK13243	333	glyoxylate reductase; Reviewed	96.83
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	96.82
PRK06123	248	short chain dehydrogenase; Provisional	96.81
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	96.8
PRK12824	245	acetoacetyl-CoA reductase; Provisional	96.8
PLN02896	353	cinnamyl-alcohol dehydrogenase	96.8
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	96.79
PLN03139	386	formate dehydrogenase; Provisional	96.79
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	96.78
PRK12744	257	short chain dehydrogenase; Provisional	96.77
PRK12827	249	short chain dehydrogenase; Provisional	96.75
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	96.74
PF08704	247	GCD14: tRNA methyltransferase complex GCD14 subuni	96.74
PRK07574	385	formate dehydrogenase; Provisional	96.73
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	96.73
PLN02653	340	GDP-mannose 4,6-dehydratase	96.72
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	96.72
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	96.71
PRK06924	251	short chain dehydrogenase; Provisional	96.7
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	96.7
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	96.7
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	96.69
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.68
PRK08655	437	prephenate dehydrogenase; Provisional	96.67
PLN00203	519	glutamyl-tRNA reductase	96.67
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	96.67
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	96.64
COG1028	251	FabG Dehydrogenases with different specificities (	96.64
PRK13255	218	thiopurine S-methyltransferase; Reviewed	96.62
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	96.62
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.62
PLN02244	340	tocopherol O-methyltransferase	96.62
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	96.61
PRK04457	262	spermidine synthase; Provisional	96.6
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.59
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	96.56
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	96.55
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	96.54
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	96.54
PLN02214	342	cinnamoyl-CoA reductase	96.54
PRK14967	223	putative methyltransferase; Provisional	96.53
PRK11036	255	putative S-adenosyl-L-methionine-dependent methylt	96.5
TIGR00477	195	tehB tellurite resistance protein TehB. Part of a	96.5
PRK01581	374	speE spermidine synthase; Validated	96.48
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	96.48
PRK10258	251	biotin biosynthesis protein BioC; Provisional	96.47
PLN02650	351	dihydroflavonol-4-reductase	96.46
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.46
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.43
PRK08287	187	cobalt-precorrin-6Y C(15)-methyltransferase; Valid	96.43
COG3288	356	PntA NAD/NADP transhydrogenase alpha subunit [Ener	96.42
PLN02233	261	ubiquinone biosynthesis methyltransferase	96.42
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	96.41
PRK01683	258	trans-aconitate 2-methyltransferase; Provisional	96.4
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	96.38
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.38
PLN00198	338	anthocyanidin reductase; Provisional	96.38
PRK08317	241	hypothetical protein; Provisional	96.38
KOG1611	249	consensus Predicted short chain-type dehydrogenase	96.38
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.37
PRK14103	255	trans-aconitate 2-methyltransferase; Provisional	96.37
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	96.36
COG3268	382	Uncharacterized conserved protein [Function unknow	96.36
PLN02695	370	GDP-D-mannose-3',5'-epimerase	96.35
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	96.34
COG2264	300	PrmA Ribosomal protein L11 methylase [Translation,	96.34
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	96.32
PLN02427	386	UDP-apiose/xylose synthase	96.32
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	96.31
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.31
PRK07578	199	short chain dehydrogenase; Provisional	96.3
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.3
PF08241	95	Methyltransf_11: Methyltransferase domain; InterPr	96.29
PRK00312	212	pcm protein-L-isoaspartate O-methyltransferase; Re	96.29
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.29
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.27
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	96.23
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	96.22
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	96.22
PF01209	233	Ubie_methyltran: ubiE/COQ5 methyltransferase famil	96.21
PLN02240	352	UDP-glucose 4-epimerase	96.2
KOG2733	423	consensus Uncharacterized membrane protein [Functi	96.18
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	96.17
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	96.17
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	96.17
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	96.16

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=100.00  E-value=5.5e-40  Score=263.07  Aligned_cols=229  Identities=31%  Similarity=0.457  Sum_probs=198.8

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEE
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVV   80 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~   80 (241)
                      .|+||||+++|++.++++ |+++++. ++|+++++++|||+++.+..++++|++|||+||+|++|.+++|+||++|++++
T Consensus        94 ~G~~AEy~~v~a~~~~~~-P~~ls~~-eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v  171 (326)
T COG0604          94 DGGYAEYVVVPADWLVPL-PDGLSFE-EAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVV  171 (326)
T ss_pred             CCcceeEEEecHHHceeC-CCCCCHH-HHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCcEE
Confidence            489999999999999999 9995555 49999999999999999989999999999999999999999999999998777


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNND  159 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~  159 (241)
                      ++++++++.++++ ++|++++++|+++ ++.+++++++++ ++|+|+|++|++.+..++.+++++|+++.+|..++    
T Consensus       172 ~~~~s~~k~~~~~-~lGAd~vi~y~~~-~~~~~v~~~t~g~gvDvv~D~vG~~~~~~~l~~l~~~G~lv~ig~~~g----  245 (326)
T COG0604         172 AVVSSSEKLELLK-ELGADHVINYREE-DFVEQVRELTGGKGVDVVLDTVGGDTFAASLAALAPGGRLVSIGALSG----  245 (326)
T ss_pred             EEecCHHHHHHHH-hcCCCEEEcCCcc-cHHHHHHHHcCCCCceEEEECCCHHHHHHHHHHhccCCEEEEEecCCC----
Confidence            7777888888888 9999999999998 899999999998 99999999999999999999999999999998653    


Q ss_pred             CCCCccChHHHhhcceEEEEeecccc-cchhHHHHHHHHHHHHcCCceeccceeecCCcH--HHHHHHhhcCCCcceEEE
Q 026217          160 KPEGVHNLTCLISKRIRMEGFLVPDY-FHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESA--PAALVGLFSGRNVGKQVV  236 (241)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~--~~a~~~l~~~~~~gk~vv  236 (241)
                      ......+...++.+.+...+...... ++...+.+..+.+++.+|.+++.++.+|||++.  ..++..++ ++..||+|+
T Consensus       246 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~g~l~~~i~~~~~l~e~~~a~a~~~~~-~~~~GKvvl  324 (326)
T COG0604         246 GPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASGKLKPVIDRVYPLAEAPAAAAHLLLE-RRTTGKVVL  324 (326)
T ss_pred             CCccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHHHHcCCCcceeccEechhhhHHHHHHHHcc-cCCcceEEE
Confidence            12223445677778888888776532 355678899999999999999999999999994  44555555 588999999


Q ss_pred             Ee
Q 026217          237 EV  238 (241)
Q Consensus       237 ~~  238 (241)
                      ++
T Consensus       325 ~~  326 (326)
T COG0604         325 KV  326 (326)
T ss_pred             eC
Confidence            74

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=1.2e-39  Score=240.42  Aligned_cols=232  Identities=23%  Similarity=0.343  Sum_probs=206.1

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEE
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVV   80 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~   80 (241)
                      +|.|||+..+|...++++ |+.+++. ++|++...++|||..+++...++||++||++.|+|++|++++|+++..|+++|
T Consensus        98 ~g~yaee~~vP~~kv~~v-pe~i~~k-~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a~tI  175 (336)
T KOG1197|consen   98 FGAYAEEVTVPSVKVFKV-PEAITLK-EAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGAHTI  175 (336)
T ss_pred             chhhheeccccceeeccC-CcccCHH-HHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCcEEE
Confidence            589999999999999999 9996655 48899999999999999999999999999999999999999999999999999


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNND  159 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~  159 (241)
                      +++++.++++.++ +.|+++.|+++.+ |+.+++++++.+ |+|+++|.+|.+++...+.+|++.|.++.+|..++.   
T Consensus       176 ~~asTaeK~~~ak-enG~~h~I~y~~e-D~v~~V~kiTngKGVd~vyDsvG~dt~~~sl~~Lk~~G~mVSfG~asgl---  250 (336)
T KOG1197|consen  176 ATASTAEKHEIAK-ENGAEHPIDYSTE-DYVDEVKKITNGKGVDAVYDSVGKDTFAKSLAALKPMGKMVSFGNASGL---  250 (336)
T ss_pred             EEeccHHHHHHHH-hcCCcceeeccch-hHHHHHHhccCCCCceeeeccccchhhHHHHHHhccCceEEEeccccCC---
Confidence            9999999999999 9999999999998 999999999987 999999999999999999999999999999986543   


Q ss_pred             CCCCccChHHHhhcceEEEEeecccc---cchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEE
Q 026217          160 KPEGVHNLTCLISKRIRMEGFLVPDY---FHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVV  236 (241)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv  236 (241)
                        ..+++...+-.+++.+....+..+   ++.......++..++.+|.+++.|.++|||+++.+|++.++++++.||+++
T Consensus       251 --~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~v~rl~alvnsg~lk~~I~~~ypls~vadA~~diesrktvGkvlL  328 (336)
T KOG1197|consen  251 --IDPIPLNQLSPKALQLVRPSLLGYIDGEVELVSYVARLFALVNSGHLKIHIDHVYPLSKVADAHADIESRKTVGKVLL  328 (336)
T ss_pred             --CCCeehhhcChhhhhhccHhhhcccCCHHHHHHHHHHHHHHhhcCccceeeeeecchHHHHHHHHHHHhhhccceEEE
Confidence              334556666667777666655544   333344566677788899999999999999999999999999999999999


Q ss_pred             EecCC
Q 026217          237 EVATE  241 (241)
Q Consensus       237 ~~~~~  241 (241)
                      .+.+|
T Consensus       329 lp~~~  333 (336)
T KOG1197|consen  329 LPGPE  333 (336)
T ss_pred             eCCcc
Confidence            88754

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=100.00  E-value=5.5e-39  Score=252.04  Aligned_cols=220  Identities=28%  Similarity=0.381  Sum_probs=200.0

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEE
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVV   80 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~   80 (241)
                      +|+||||+++|+++++++ |++++.. ++|.+.|++.|+|++|.+ .+++||++|+|+|+ |++|++++|+|+++|++|+
T Consensus       119 ~GGyaeyv~v~~~~~~~i-P~~~d~~-~aApllCaGiT~y~alk~-~~~~pG~~V~I~G~-GGlGh~avQ~Aka~ga~Vi  194 (339)
T COG1064         119 DGGYAEYVVVPARYVVKI-PEGLDLA-EAAPLLCAGITTYRALKK-ANVKPGKWVAVVGA-GGLGHMAVQYAKAMGAEVI  194 (339)
T ss_pred             cCcceeEEEEchHHeEEC-CCCCChh-hhhhhhcCeeeEeeehhh-cCCCCCCEEEEECC-cHHHHHHHHHHHHcCCeEE
Confidence            599999999999999999 9996655 489999999999999955 89999999999997 7999999999999999999


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCCC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDK  160 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~  160 (241)
                      ++++++++.+.++ ++|++++++.++. +..+.+++.    +|+++|+++...+..+++.|+++|+++.+|...    ..
T Consensus       195 a~~~~~~K~e~a~-~lGAd~~i~~~~~-~~~~~~~~~----~d~ii~tv~~~~~~~~l~~l~~~G~~v~vG~~~----~~  264 (339)
T COG1064         195 AITRSEEKLELAK-KLGADHVINSSDS-DALEAVKEI----ADAIIDTVGPATLEPSLKALRRGGTLVLVGLPG----GG  264 (339)
T ss_pred             EEeCChHHHHHHH-HhCCcEEEEcCCc-hhhHHhHhh----CcEEEECCChhhHHHHHHHHhcCCEEEEECCCC----Cc
Confidence            9999999999999 9999999998765 777777764    999999999889999999999999999999853    12


Q ss_pred             CCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEEEec
Q 026217          161 PEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVA  239 (241)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv~~~  239 (241)
                      +....+...++.+++++.|+....     +.++++++++..+|+++|.+.+.++++++++|++.|.+++..||+|+.++
T Consensus       265 ~~~~~~~~~li~~~~~i~GS~~g~-----~~d~~e~l~f~~~g~Ikp~i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~~  338 (339)
T COG1064         265 PIPLLPAFLLILKEISIVGSLVGT-----RADLEEALDFAAEGKIKPEILETIPLDEINEAYERMEKGKVRGRAVIDMS  338 (339)
T ss_pred             ccCCCCHHHhhhcCeEEEEEecCC-----HHHHHHHHHHHHhCCceeeEEeeECHHHHHHHHHHHHcCCeeeEEEecCC
Confidence            334467788999999999999988     88899999999999999999889999999999999999999999999764

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=100.00  E-value=7.4e-37  Score=248.97  Aligned_cols=239  Identities=73%  Similarity=1.207  Sum_probs=198.9

Q ss_pred             CccceEEeecCCc--e--eeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC
Q 026217            2 TGWEEYSLVTAPR--L--FKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC   77 (241)
Q Consensus         2 G~~ae~~~v~~~~--~--~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~   77 (241)
                      |+|+||.+++.+.  +  +++ |++++++.++|+++++++|||+++.+.+++++|++|+|+|++|++|++++|+|+.+|+
T Consensus       106 ~~~aey~~v~~~~~~~~~~~~-P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~  184 (348)
T PLN03154        106 TGWEEYSLIRSSDNQLRKIQL-QDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGC  184 (348)
T ss_pred             CCcEEEEEEeccccceEEccC-cCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC
Confidence            6899999998854  5  445 7886554347799999999999998888899999999999999999999999999999


Q ss_pred             EEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccC
Q 026217           78 YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYN  157 (241)
Q Consensus        78 ~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~  157 (241)
                      +|+++++++++.+.+++++|+++++++++..++.+.+++.+++++|++|||+|+..+..++++++++|+++.+|...+.+
T Consensus       185 ~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvD~v~d~vG~~~~~~~~~~l~~~G~iv~~G~~~~~~  264 (348)
T PLN03154        185 YVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFPEGIDIYFDNVGGDMLDAALLNMKIHGRIAVCGMVSLNS  264 (348)
T ss_pred             EEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHHHHHHHCCCCcEEEEECCCHHHHHHHHHHhccCCEEEEECccccCC
Confidence            99999999999998875799999999874216777888777668999999999988999999999999999999754321


Q ss_pred             CCCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEEE
Q 026217          158 NDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVE  237 (241)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv~  237 (241)
                      ........+...++.+++++.|+....+.+...+.++++++++.+|++++.+..+|||+++++|++.+++++..||+|++
T Consensus       265 ~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~~~~~~~~L~~~~~A~~~l~~g~~~GKvVl~  344 (348)
T PLN03154        265 LSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVYIEDMSEGLESAPAALVGLFSGKNVGKQVIR  344 (348)
T ss_pred             CCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccCceecccCHHHHHHHHHHHHcCCCCceEEEE
Confidence            11111123456678889999998765543344567889999999999999888899999999999999999999999999


Q ss_pred             ecCC
Q 026217          238 VATE  241 (241)
Q Consensus       238 ~~~~  241 (241)
                      +++|
T Consensus       345 ~~~~  348 (348)
T PLN03154        345 VAKE  348 (348)
T ss_pred             ecCC
Confidence            9765

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=100.00  E-value=1.9e-36  Score=229.37  Aligned_cols=238  Identities=51%  Similarity=0.888  Sum_probs=215.7

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVG   81 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~   81 (241)
                      .+|+||.+++.+.+.|++|...+.+.....+..+..|||.+|.+++.+++|++|+|.+|+|.+|..+.|+||..|++|+.
T Consensus       101 ~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~rVVG  180 (340)
T COG2130         101 SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVG  180 (340)
T ss_pred             ccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCCeEEE
Confidence            48999999999999999666667776688999999999999999999999999999999999999999999999999999


Q ss_pred             EeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCC-C
Q 026217           82 SAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNND-K  160 (241)
Q Consensus        82 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~-~  160 (241)
                      ++.++++.+++.+++|.|.+|||+.+ ++.+.+++..+.++|+.||++|++.+...+..|+.++|++.+|..+..+.. .
T Consensus       181 iaGg~eK~~~l~~~lGfD~~idyk~~-d~~~~L~~a~P~GIDvyfeNVGg~v~DAv~~~ln~~aRi~~CG~IS~YN~~~~  259 (340)
T COG2130         181 IAGGAEKCDFLTEELGFDAGIDYKAE-DFAQALKEACPKGIDVYFENVGGEVLDAVLPLLNLFARIPVCGAISQYNAPEL  259 (340)
T ss_pred             ecCCHHHHHHHHHhcCCceeeecCcc-cHHHHHHHHCCCCeEEEEEcCCchHHHHHHHhhccccceeeeeehhhcCCCCC
Confidence            99999999999966999999999998 999999999988999999999999999999999999999999987765433 3


Q ss_pred             CCCccChHHHhhcceEEEEeec-ccccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEEEec
Q 026217          161 PEGVHNLTCLISKRIRMEGFLV-PDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVA  239 (241)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv~~~  239 (241)
                      +..+.....++.+.+++.|+.. ..+.+...+..+++..|+++|+++...+.+-.||.+++||..|.+++.+||+|+++.
T Consensus       260 ~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~GKi~~~eti~dGlEnaP~Af~gLl~G~N~GK~vvKv~  339 (340)
T COG2130         260 PPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEGKIQYRETIVDGLENAPEAFIGLLSGKNFGKLVVKVA  339 (340)
T ss_pred             CCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHHcCceeeEeeehhhhhccHHHHHHHhcCCccceEEEEec
Confidence            4455667788889999999998 444555569999999999999999998766679999999999999999999999986


Q ss_pred             C
Q 026217          240 T  240 (241)
Q Consensus       240 ~  240 (241)
                      +
T Consensus       340 ~  340 (340)
T COG2130         340 D  340 (340)
T ss_pred             C
Confidence            4

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=4.9e-36  Score=240.45  Aligned_cols=234  Identities=26%  Similarity=0.364  Sum_probs=188.9

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhc------CCCCCcEEEEEcCCchHHHHHHHHHHH
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVC------SPKQGEYVFVSAASGAVGQLVGQFAKL   74 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~------~~~~~~~vlI~ga~g~~G~~avqla~~   74 (241)
                      .|+|+||.++|+..++++ |+++++. ++|++|.++.|||.++....      ++++|++|||+||+|++|++++|+|++
T Consensus       103 ~g~~aey~v~p~~~~~~~-P~~l~~~-~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~  180 (347)
T KOG1198|consen  103 SGGLAEYVVVPEKLLVKI-PESLSFE-EAAALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKH  180 (347)
T ss_pred             CCceeeEEEcchhhccCC-CCccChh-hhhcCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHh
Confidence            389999999999999999 9996666 58899999999999999998      899999999999999999999999999


Q ss_pred             cCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeeec
Q 026217           75 VGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMIS  154 (241)
Q Consensus        75 ~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  154 (241)
                      +|+..+++++++++.++++ ++|+++++||+++ ++.+++++.++++||+||||+|+........++..+|+...++..+
T Consensus       181 ~~~~~v~t~~s~e~~~l~k-~lGAd~vvdy~~~-~~~e~~kk~~~~~~DvVlD~vg~~~~~~~~~~l~~~g~~~~i~~~~  258 (347)
T KOG1198|consen  181 AGAIKVVTACSKEKLELVK-KLGADEVVDYKDE-NVVELIKKYTGKGVDVVLDCVGGSTLTKSLSCLLKGGGGAYIGLVG  258 (347)
T ss_pred             cCCcEEEEEcccchHHHHH-HcCCcEeecCCCH-HHHHHHHhhcCCCccEEEECCCCCccccchhhhccCCceEEEEecc
Confidence            9975555555899999999 9999999999998 9999999988449999999999988888888888888766555543


Q ss_pred             ccCCCCCCCccChHHHhh---cceEEEEeecccc-cchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCC
Q 026217          155 QYNNDKPEGVHNLTCLIS---KRIRMEGFLVPDY-FHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRN  230 (241)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~  230 (241)
                      ......+...... .+..   ....+.+...... .....+.+..+.+++++|+++|.+.+.||++++.+|++.+.+++.
T Consensus       259 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ie~gkikp~i~~~~p~~~~~ea~~~~~~~~~  337 (347)
T KOG1198|consen  259 DELANYKLDDLWQ-SANGIKLYSLGLKGVNYRWLYFVPSAEYLKALVELIEKGKIKPVIDSVYPFSQAKEAFEKLEKSHA  337 (347)
T ss_pred             ccccccccccchh-hhhhhhheeeeeeccceeeeeecCCHHHHHHHHHHHHcCcccCCcceeeeHHHHHHHHHHHhhcCC
Confidence            3211111110000 0111   1111222222111 445588999999999999999999999999999999999999999


Q ss_pred             cceEEEEec
Q 026217          231 VGKQVVEVA  239 (241)
Q Consensus       231 ~gk~vv~~~  239 (241)
                      .||+++++.
T Consensus       338 ~GK~vl~~~  346 (347)
T KOG1198|consen  338 TGKVVLEKD  346 (347)
T ss_pred             cceEEEEec
Confidence            999999875

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=100.00  E-value=4.9e-35  Score=237.92  Aligned_cols=237  Identities=75%  Similarity=1.244  Sum_probs=195.4

Q ss_pred             CccceEEeecC-CceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEE
Q 026217            2 TGWEEYSLVTA-PRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVV   80 (241)
Q Consensus         2 G~~ae~~~v~~-~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~   80 (241)
                      |+|+||+++|+ ..++++||++++++.++++++++++|||+++.+.+++++|++|+|+||+|++|++++|+|+.+|++|+
T Consensus       101 g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi  180 (338)
T cd08295         101 TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGCYVV  180 (338)
T ss_pred             CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEE
Confidence            78999999999 78999944676655358899999999999998888999999999999999999999999999999999


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCCC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDK  160 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~  160 (241)
                      ++++++++.+++++.+|+++++++++..++.+.+++.+++++|++||++|+..+..++++++++|+++.+|.........
T Consensus       181 ~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvd~v~d~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~  260 (338)
T cd08295         181 GSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFPNGIDIYFDNVGGKMLDAVLLNMNLHGRIAACGMISQYNLEW  260 (338)
T ss_pred             EEeCCHHHHHHHHHhcCCceeEEcCCcccHHHHHHHhCCCCcEEEEECCCHHHHHHHHHHhccCcEEEEecccccCCCCC
Confidence            99999999999993399999998754216777787776568999999999988999999999999999998644311110


Q ss_pred             CCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEEEe
Q 026217          161 PEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  238 (241)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv~~  238 (241)
                      .....+...++.+++++.++......+...+.+.++++++.+|.+++.+...||++++.+|++.+++++..||+|+++
T Consensus       261 ~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~GkvVl~~  338 (338)
T cd08295         261 PEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYVEDIADGLESAPEAFVGLFTGSNIGKQVVKV  338 (338)
T ss_pred             CCCccCHHHHhhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEceeecccCHHHHHHHHHHHhcCCCCceEEEEC
Confidence            001123456667788888866554443445678889999999999988777899999999999999999899999874

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=100.00  E-value=3.4e-33  Score=226.33  Aligned_cols=234  Identities=47%  Similarity=0.863  Sum_probs=195.3

Q ss_pred             CccceEEeecCC---ceeeecCCCCC--cc--hhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHH
Q 026217            2 TGWEEYSLVTAP---RLFKIQHTDMP--LS--YYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKL   74 (241)
Q Consensus         2 G~~ae~~~v~~~---~~~~i~P~~~~--~~--~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~   74 (241)
                      ++|++|++++.+   .++++ |++++  +.  ...++++.+++|||+++.+.+++++|++|+|+||+|++|++++|+|+.
T Consensus        88 ~~~~~~~~~~~~~~~~~~~i-P~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~  166 (329)
T cd08294          88 FGWRTHTVSDGKDQPDLYKL-PADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKI  166 (329)
T ss_pred             CCeeeEEEECCccccceEEC-CccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHH
Confidence            578999999999   99999 99855  11  123578999999999998888999999999999999999999999999


Q ss_pred             cCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeeec
Q 026217           75 VGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMIS  154 (241)
Q Consensus        75 ~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  154 (241)
                      +|++|+++++++++.++++ ++|+++++++++. ++.+++++.+++++|++||++|++.+..++++++++|+++.+|...
T Consensus       167 ~G~~vi~~~~s~~~~~~l~-~~Ga~~vi~~~~~-~~~~~v~~~~~~gvd~vld~~g~~~~~~~~~~l~~~G~iv~~g~~~  244 (329)
T cd08294         167 KGCKVIGCAGSDDKVAWLK-ELGFDAVFNYKTV-SLEEALKEAAPDGIDCYFDNVGGEFSSTVLSHMNDFGRVAVCGSIS  244 (329)
T ss_pred             cCCEEEEEeCCHHHHHHHH-HcCCCEEEeCCCc-cHHHHHHHHCCCCcEEEEECCCHHHHHHHHHhhccCCEEEEEcchh
Confidence            9999999999999999999 8999999999887 8888888877668999999999988999999999999999998643


Q ss_pred             ccCCCCCC-CccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcce
Q 026217          155 QYNNDKPE-GVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGK  233 (241)
Q Consensus       155 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk  233 (241)
                      ..+..... .......++.+++++.++....+.....+.++.+++++.+|.+++.+..+++++++++|++.+++++..||
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gk  324 (329)
T cd08294         245 TYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYREHVTEGFENMPQAFIGMLKGENTGK  324 (329)
T ss_pred             ccCCCCCCcCcccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCCcccccCHHHHHHHHHHHHcCCCCCe
Confidence            21111110 12234456778888888765443334456788899999999999877778999999999999999998999


Q ss_pred             EEEEe
Q 026217          234 QVVEV  238 (241)
Q Consensus       234 ~vv~~  238 (241)
                      +|+++
T Consensus       325 vvv~~  329 (329)
T cd08294         325 AIVKV  329 (329)
T ss_pred             EEEeC
Confidence            99864

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.2e-33  Score=214.27  Aligned_cols=222  Identities=22%  Similarity=0.262  Sum_probs=195.1

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEE
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVV   80 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~   80 (241)
                      +|+||+|+++++.++++| |+++++. .+|.+.|++.|+|.+|. ..++.||+++.|.|+ |++|++++|+||++|.+|+
T Consensus       134 ~ggf~~~~~v~~~~a~kI-P~~~pl~-~aAPlLCaGITvYspLk-~~g~~pG~~vgI~Gl-GGLGh~aVq~AKAMG~rV~  209 (360)
T KOG0023|consen  134 QGGFQEYAVVDEVFAIKI-PENLPLA-SAAPLLCAGITVYSPLK-RSGLGPGKWVGIVGL-GGLGHMAVQYAKAMGMRVT  209 (360)
T ss_pred             cCccceeEEEeeeeEEEC-CCCCChh-hccchhhcceEEeehhH-HcCCCCCcEEEEecC-cccchHHHHHHHHhCcEEE
Confidence            578999999999999999 9997777 59999999999999994 579999999999997 6699999999999999999


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCC-CchhHHHHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYK-EEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNND  159 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~-~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~  159 (241)
                      ++++++++.+.+-+.+|++..++.. ++ ++.+.+.+.+++++|-|.+. ....+..++.+++.+|+++.+|.+..    
T Consensus       210 vis~~~~kkeea~~~LGAd~fv~~~~d~-d~~~~~~~~~dg~~~~v~~~-a~~~~~~~~~~lk~~Gt~V~vg~p~~----  283 (360)
T KOG0023|consen  210 VISTSSKKKEEAIKSLGADVFVDSTEDP-DIMKAIMKTTDGGIDTVSNL-AEHALEPLLGLLKVNGTLVLVGLPEK----  283 (360)
T ss_pred             EEeCCchhHHHHHHhcCcceeEEecCCH-HHHHHHHHhhcCcceeeeec-cccchHHHHHHhhcCCEEEEEeCcCC----
Confidence            9999885555554489999888877 55 89999999988888888777 44678899999999999999998542    


Q ss_pred             CCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEEEec
Q 026217          160 KPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVA  239 (241)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv~~~  239 (241)
                        ....+...+..+.+.+.|+..++     +...++++++..++.+++.+ +..+++++++|+++|++++..+|.|+.++
T Consensus       284 --~~~~~~~~lil~~~~I~GS~vG~-----~ket~E~Ldf~a~~~ik~~I-E~v~~~~v~~a~erm~kgdV~yRfVvD~s  355 (360)
T KOG0023|consen  284 --PLKLDTFPLILGRKSIKGSIVGS-----RKETQEALDFVARGLIKSPI-ELVKLSEVNEAYERMEKGDVRYRFVVDVS  355 (360)
T ss_pred             --cccccchhhhcccEEEEeecccc-----HHHHHHHHHHHHcCCCcCce-EEEehhHHHHHHHHHHhcCeeEEEEEEcc
Confidence              34466678889999999999998     78899999999999999988 77899999999999999999999999876


Q ss_pred             C
Q 026217          240 T  240 (241)
Q Consensus       240 ~  240 (241)
                      .
T Consensus       356 ~  356 (360)
T KOG0023|consen  356 K  356 (360)
T ss_pred             c
Confidence            3

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=100.00  E-value=5.8e-33  Score=228.28  Aligned_cols=224  Identities=18%  Similarity=0.253  Sum_probs=191.6

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVV   80 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~   80 (241)
                      |+|+||++++++.++++ |++++.. +++.++++++|||+++.+.+++++|++|+|+|+ |++|++++|+|+..|+ +|+
T Consensus       144 G~~aey~~v~~~~~~~l-P~~l~~~-~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi  220 (371)
T cd08281         144 SAFAEYAVVSRRSVVKI-DKDVPLE-IAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGL-GGVGLSALLGAVAAGASQVV  220 (371)
T ss_pred             ccceeeEEecccceEEC-CCCCChH-HhhhhcchHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEE
Confidence            68999999999999999 9995554 377888899999999877788999999999985 9999999999999999 799


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeecccCCC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNND  159 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~  159 (241)
                      ++++++++.++++ ++|+++++++.+. ++.+++++.+++++|++|||+|+ ..+..++++++++|+++.+|.....   
T Consensus       221 ~~~~~~~r~~~a~-~~Ga~~~i~~~~~-~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~---  295 (371)
T cd08281         221 AVDLNEDKLALAR-ELGATATVNAGDP-NAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPE---  295 (371)
T ss_pred             EEcCCHHHHHHHH-HcCCceEeCCCch-hHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCC---
Confidence            9999999999998 9999999998876 88888888876689999999996 6888999999999999999874321   


Q ss_pred             CCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCcee--ccceeecCCcHHHHHHHhhcCCCcceEEE
Q 026217          160 KPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQVV  236 (241)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~l~~~~~~gk~vv  236 (241)
                       .....+...++.+++++.++....+.  ..+.+..+++++.+|++++  .++++|+|+++++||+.+.+++..+|+|+
T Consensus       296 -~~~~~~~~~~~~~~~~i~g~~~~~~~--~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi~  371 (371)
T cd08281         296 -ARLSVPALSLVAEERTLKGSYMGSCV--PRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVIL  371 (371)
T ss_pred             -ceeeecHHHHhhcCCEEEEEecCCCC--hHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence             11234566788899999998765432  1456788899999999975  57889999999999999999998888764

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=5.7e-33  Score=212.48  Aligned_cols=223  Identities=22%  Similarity=0.248  Sum_probs=190.6

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EE
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YV   79 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v   79 (241)
                      .|++++|+++++++++|+ |++  ++++.+++..+++++|+|. +++++++|++|||+|| |++|+.+...|+.+|+ +|
T Consensus       123 ~G~la~y~~~~~dfc~KL-Pd~--vs~eeGAl~ePLsV~~HAc-r~~~vk~Gs~vLV~GA-GPIGl~t~l~Aka~GA~~V  197 (354)
T KOG0024|consen  123 DGTLAEYYVHPADFCYKL-PDN--VSFEEGALIEPLSVGVHAC-RRAGVKKGSKVLVLGA-GPIGLLTGLVAKAMGASDV  197 (354)
T ss_pred             CCceEEEEEechHheeeC-CCC--Cchhhcccccchhhhhhhh-hhcCcccCCeEEEECC-cHHHHHHHHHHHHcCCCcE
Confidence            489999999999999999 999  5555899999999999999 6689999999999997 9999999999999999 99


Q ss_pred             EEEeCCHHHHHHHHHHcCCCeeecCCCc---hhHHHHHHHHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeec
Q 026217           80 VGSAGSKDKVDLLKNKFGFDEAFNYKEE---PDLDAALKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMIS  154 (241)
Q Consensus        80 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~---~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~  154 (241)
                      ++++..+.+++.++ ++|++.+.+....   ..+.+.+....++ .+|++|||+|. ..++.++..++.+|+++.+|...
T Consensus       198 Vi~d~~~~Rle~Ak-~~Ga~~~~~~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~  276 (354)
T KOG0024|consen  198 VITDLVANRLELAK-KFGATVTDPSSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGA  276 (354)
T ss_pred             EEeecCHHHHHHHH-HhCCeEEeeccccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCC
Confidence            99999999999999 7999876655542   1344555555554 79999999996 68899999999999988888632


Q ss_pred             ccCCCCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCce--eccceeecCCcHHHHHHHhhcCCC-c
Q 026217          155 QYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIV--YVEDKAEGLESAPAALVGLFSGRN-V  231 (241)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~l~~~~~a~~~l~~~~~-~  231 (241)
                            ...+++......+.+.+.|+..+.     +.++...++++.+|++.  ++++..|+++++.+||+.++.++. .
T Consensus       277 ------~~~~fpi~~v~~kE~~~~g~fry~-----~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~  345 (354)
T KOG0024|consen  277 ------EEIQFPIIDVALKEVDLRGSFRYC-----NGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGV  345 (354)
T ss_pred             ------CccccChhhhhhheeeeeeeeeec-----cccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCc
Confidence                  445677888999999999998765     66899999999999886  578899999999999999998764 3


Q ss_pred             ceEEEEecC
Q 026217          232 GKQVVEVAT  240 (241)
Q Consensus       232 gk~vv~~~~  240 (241)
                      -|+++..++
T Consensus       346 iKv~i~~~~  354 (354)
T KOG0024|consen  346 IKVIITGPE  354 (354)
T ss_pred             eEEEEeCCC
Confidence            488887653

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=100.00  E-value=1.2e-32  Score=222.77  Aligned_cols=234  Identities=46%  Similarity=0.785  Sum_probs=188.7

Q ss_pred             CccceEEeecCCceeeec---CCCCCcchhh-hhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC
Q 026217            2 TGWEEYSLVTAPRLFKIQ---HTDMPLSYYT-GILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC   77 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~---P~~~~~~~~~-a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~   77 (241)
                      ++|++|++++.+.+.+++   |++++.. ++ ++++++++|||+++.+.+++++|++|+|+||+|++|++++|+|+..|+
T Consensus        86 ~~~~~~~~~~~~~~~~l~~~~p~~~~~~-~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~  164 (325)
T TIGR02825        86 PGWTSHSISDGKDLEKLLTEWPDTLPLS-LALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGC  164 (325)
T ss_pred             cCceeeEEechhheEEccccccCCCCHH-HHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCC
Confidence            578999999988866551   5664433 34 679999999999998888999999999999999999999999999999


Q ss_pred             EEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccC
Q 026217           78 YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYN  157 (241)
Q Consensus        78 ~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~  157 (241)
                      +|+++++++++.++++ ++|+++++++++..++.+.++...++++|++||++|+..+..++++++++|+++.+|......
T Consensus       165 ~Vi~~~~s~~~~~~~~-~lGa~~vi~~~~~~~~~~~~~~~~~~gvdvv~d~~G~~~~~~~~~~l~~~G~iv~~G~~~~~~  243 (325)
T TIGR02825       165 KVVGAAGSDEKVAYLK-KLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAISTYN  243 (325)
T ss_pred             EEEEEeCCHHHHHHHH-HcCCCEEEeccccccHHHHHHHhCCCCeEEEEECCCHHHHHHHHHHhCcCcEEEEecchhhcc
Confidence            9999999999999998 999999999876315666666666558999999999988899999999999999998644211


Q ss_pred             CCCCCC-ccChHHHhhcceEEEEeecccc-cchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEE
Q 026217          158 NDKPEG-VHNLTCLISKRIRMEGFLVPDY-FHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQV  235 (241)
Q Consensus       158 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~v  235 (241)
                      ...... ......++.+++++.++....+ .+...+.+.++++++.+|.+++.+..+|+++++.+|++.+++++..||+|
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gkvV  323 (325)
T TIGR02825       244 RTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLKWVLEGKIQYKEYVIEGFENMPAAFMGMLKGENLGKTI  323 (325)
T ss_pred             cCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHHHHHCCCcccceeccccHHHHHHHHHHHhcCCCCCeEE
Confidence            000111 1223456667888888765432 23335678899999999999988778899999999999999999899999


Q ss_pred             EE
Q 026217          236 VE  237 (241)
Q Consensus       236 v~  237 (241)
                      ++
T Consensus       324 v~  325 (325)
T TIGR02825       324 VK  325 (325)
T ss_pred             eC
Confidence            74

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd08293 PTGR2 Prostaglandin reductase

Probab=100.00  E-value=3e-32  Score=222.20  Aligned_cols=235  Identities=39%  Similarity=0.691  Sum_probs=186.1

Q ss_pred             CccceEEeecCCceeeecCCCCCc---chhhhhcCchhHHHHHHHHHhcCCCCC--cEEEEEcCCchHHHHHHHHHHHcC
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPL---SYYTGILGMPGMTAYAGFFEVCSPKQG--EYVFVSAASGAVGQLVGQFAKLVG   76 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~---~~~~a~l~~~~~ta~~~l~~~~~~~~~--~~vlI~ga~g~~G~~avqla~~~g   76 (241)
                      |+|+||++++++.++++ |++++.   +.++++++.+++|||+++.+.+++++|  ++|+|+||+|++|++++|+|+++|
T Consensus       101 ~~~ae~~~v~~~~~~~i-P~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G  179 (345)
T cd08293         101 WPWQTYAVLDGSSLEKV-DPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLG  179 (345)
T ss_pred             CCceeEEEecHHHeEEc-CccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcC
Confidence            47999999999999999 887432   222467888999999999887888877  999999999999999999999999


Q ss_pred             C-EEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeeecc
Q 026217           77 C-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQ  155 (241)
Q Consensus        77 ~-~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~  155 (241)
                      + +|+++++++++.+++++++|+++++++++. ++.+.+++.+++++|++||++|+..+..++++++++|+++.+|....
T Consensus       180 ~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~-~~~~~i~~~~~~gvd~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~  258 (345)
T cd08293         180 CSRVVGICGSDEKCQLLKSELGFDAAINYKTD-NVAERLRELCPEGVDVYFDNVGGEISDTVISQMNENSHIILCGQISQ  258 (345)
T ss_pred             CCEEEEEcCCHHHHHHHHHhcCCcEEEECCCC-CHHHHHHHHCCCCceEEEECCCcHHHHHHHHHhccCCEEEEEeeeec
Confidence            9 899999999999999845999999999887 88888988876689999999998888999999999999999986432


Q ss_pred             cCCCCCC-CccC--hHH-HhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCc
Q 026217          156 YNNDKPE-GVHN--LTC-LISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNV  231 (241)
Q Consensus       156 ~~~~~~~-~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~  231 (241)
                      ....... ....  ... ...+++++.++..........+.++++.+++.+|.+++.+...++++++.+|++.+.+++..
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~  338 (345)
T cd08293         259 YNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIAQLSQWVKEGKLKVKETVYEGLENAGEAFQSMMNGGNI  338 (345)
T ss_pred             ccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHHHHHHHHHCCCccceeEEeecHHHHHHHHHHHhcCCCC
Confidence            1000000 0111  011 22345555444332233344567888999999999998766677999999999999999889


Q ss_pred             ceEEEEe
Q 026217          232 GKQVVEV  238 (241)
Q Consensus       232 gk~vv~~  238 (241)
                      ||+|+++
T Consensus       339 gkvvl~~  345 (345)
T cd08293         339 GKQIVKV  345 (345)
T ss_pred             CeEEEEC
Confidence            9999874

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-32  Score=223.69  Aligned_cols=216  Identities=20%  Similarity=0.227  Sum_probs=181.0

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVV   80 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~   80 (241)
                      |+|+||++++++.++++ |++  ++++++++..++++||+++.+ ....+|++|+|+|+ |++|++++|+|+.+|+ +|+
T Consensus       124 G~~aey~~v~~~~~~~~-P~~--l~~~~aa~~~~~~~a~~al~~-~~~~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi  198 (343)
T PRK09880        124 GGFTRYKVVDTAQCIPY-PEK--ADEKVMAFAEPLAVAIHAAHQ-AGDLQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIV  198 (343)
T ss_pred             CceeeeEEechHHeEEC-CCC--CCHHHHHhhcHHHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEE
Confidence            89999999999999999 999  444456678889999999955 46678999999996 9999999999999999 799


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeecccCCC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNND  159 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~  159 (241)
                      ++++++++++.++ ++|+++++++++. ++.+.. .. .+++|++|||+|+ ..+..++++++++|+++.+|....    
T Consensus       199 ~~~~~~~~~~~a~-~lGa~~vi~~~~~-~~~~~~-~~-~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~----  270 (343)
T PRK09880        199 CADVSPRSLSLAR-EMGADKLVNPQND-DLDHYK-AE-KGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGA----  270 (343)
T ss_pred             EEeCCHHHHHHHH-HcCCcEEecCCcc-cHHHHh-cc-CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC----
Confidence            9999999999999 8999999998876 654322 22 2369999999997 578899999999999999986321    


Q ss_pred             CCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCcee--ccceeecCCcHHHHHHHhhcCCCcceEEEE
Q 026217          160 KPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQVVE  237 (241)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~l~~~~~~gk~vv~  237 (241)
                        ....+...++.+++++.++...      .+.++.+++++.+|.+++  .++++||++++++|++.+.+++..||+++.
T Consensus       271 --~~~~~~~~~~~k~~~i~g~~~~------~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~  342 (343)
T PRK09880        271 --PPEFPMMTLIVKEISLKGSFRF------TEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLV  342 (343)
T ss_pred             --CCccCHHHHHhCCcEEEEEeec------cccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEe
Confidence              1235566778899999887642      346888999999999986  677899999999999999988878999986


Q ss_pred             e
Q 026217          238 V  238 (241)
Q Consensus       238 ~  238 (241)
                      +
T Consensus       343 ~  343 (343)
T PRK09880        343 F  343 (343)
T ss_pred             C
Confidence            4

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=100.00  E-value=2.7e-32  Score=221.94  Aligned_cols=218  Identities=24%  Similarity=0.269  Sum_probs=185.3

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCE-EE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-VV   80 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~-v~   80 (241)
                      |+|+||++++...++++ |++++.. +++++++++.|||+++. ...+++|++|+|+|+ |++|++++|+|+++|++ |+
T Consensus       117 G~~ae~~~v~~~~~~~~-P~~~~~~-~aa~l~~~~~ta~~~l~-~~~~~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi  192 (339)
T cd08239         117 GGHAEYMLVPEKTLIPL-PDDLSFA-DGALLLCGIGTAYHALR-RVGVSGRDTVLVVGA-GPVGLGALMLARALGAEDVI  192 (339)
T ss_pred             CcceeEEEechHHeEEC-CCCCCHH-HhhhhcchHHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEE
Confidence            78999999999999999 9995544 47788899999999995 468899999999985 99999999999999997 99


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCch-hHHHHHHhhccCCEEEEEeeecccCC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGGK-MLDAVLLNMRIQGRITLCGMISQYNN  158 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~  158 (241)
                      ++++++++.+.++ ++|+++++++++. + .+.+.+.+++ ++|++|||+|+. .+..++++++++|+++.+|....   
T Consensus       193 ~~~~~~~~~~~~~-~~ga~~~i~~~~~-~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~---  266 (339)
T cd08239         193 GVDPSPERLELAK-ALGADFVINSGQD-D-VQEIRELTSGAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGE---  266 (339)
T ss_pred             EECCCHHHHHHHH-HhCCCEEEcCCcc-h-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCC---
Confidence            9999999999998 9999999998876 6 6777777766 899999999975 45788999999999999987432   


Q ss_pred             CCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCcee--ccceeecCCcHHHHHHHhhcCCCcceEEE
Q 026217          159 DKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQVV  236 (241)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~l~~~~~~gk~vv  236 (241)
                        . .......++.+++++.++....     .+.+.++++++.+|.+++  .++++|+++++++|++.+.+++ .||+|+
T Consensus       267 --~-~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~-~gKvvi  337 (339)
T cd08239         267 --L-TIEVSNDLIRKQRTLIGSWYFS-----VPDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGE-SGKVVF  337 (339)
T ss_pred             --c-ccCcHHHHHhCCCEEEEEecCC-----HHHHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCC-ceEEEE
Confidence              1 1112345777899999987654     567888999999998874  6788999999999999998876 689998


Q ss_pred             Ee
Q 026217          237 EV  238 (241)
Q Consensus       237 ~~  238 (241)
                      ++
T Consensus       338 ~~  339 (339)
T cd08239         338 VF  339 (339)
T ss_pred             eC
Confidence            75

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=100.00  E-value=3.4e-32  Score=205.65  Aligned_cols=238  Identities=76%  Similarity=1.288  Sum_probs=215.6

Q ss_pred             ccceEEeecCCc--eeeecC--CCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCE
Q 026217            3 GWEEYSLVTAPR--LFKIQH--TDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY   78 (241)
Q Consensus         3 ~~ae~~~v~~~~--~~~i~P--~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~   78 (241)
                      +|.||.++++..  .+++ |  .++++++...++..+.+|||..+++++.+++|++|+|-||+|.+|+.+.|+|+.+|++
T Consensus       102 gWeeysii~~~~~~~~ki-~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc~  180 (343)
T KOG1196|consen  102 GWEEYSVITPNDLEHFKI-QHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGCY  180 (343)
T ss_pred             cceEEEEecCcchhcccC-CCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCCE
Confidence            689999997755  4555 3  4667886689999999999999999999999999999999999999999999999999


Q ss_pred             EEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCC
Q 026217           79 VVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNN  158 (241)
Q Consensus        79 v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~  158 (241)
                      |++.+.++++.+.++.++|.|..+||.++.+..+.++...++++|+.||.+|+..+...+..|+..||++.+|.-+..+.
T Consensus       181 VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~GIDiYfeNVGG~~lDavl~nM~~~gri~~CG~ISqYN~  260 (343)
T KOG1196|consen  181 VVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPEGIDIYFENVGGKMLDAVLLNMNLHGRIAVCGMISQYNL  260 (343)
T ss_pred             EEEecCChhhhhhhHhccCCccceeccCccCHHHHHHHhCCCcceEEEeccCcHHHHHHHHhhhhccceEeeeeehhccc
Confidence            99999999999999988999999999987689999999888899999999999999999999999999999998776655


Q ss_pred             CCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEEEe
Q 026217          159 DKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  238 (241)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv~~  238 (241)
                      +.+....+....+.+.+++.|+...++.+.+.+.+..+..++++|+++...+-.-.||..++||.-|.+++-.||.++.+
T Consensus       261 ~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~edi~~Glen~P~A~vglf~GkNvGKqiv~v  340 (343)
T KOG1196|consen  261 ENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKITYVEDIADGLENGPSALVGLFHGKNVGKQLVKV  340 (343)
T ss_pred             cCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceEEehhHHHHHhccHHHHHHHhccCcccceEEEe
Confidence            66666677788999999999999888888889999999999999999998877778999999999999999999999998


Q ss_pred             cCC
Q 026217          239 ATE  241 (241)
Q Consensus       239 ~~~  241 (241)
                      +.|
T Consensus       341 a~E  343 (343)
T KOG1196|consen  341 ARE  343 (343)
T ss_pred             ecC
Confidence            754

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=100.00  E-value=8.5e-32  Score=217.75  Aligned_cols=225  Identities=22%  Similarity=0.315  Sum_probs=188.1

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEE-cCCchHHHHHHHHHHHcCCEEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVS-AASGAVGQLVGQFAKLVGCYVV   80 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~-ga~g~~G~~avqla~~~g~~v~   80 (241)
                      |+|+||+.+|++.++++ |++++.. ++++++..+.|||.++ ....+ ++++++|+ ||+|++|++++|+|+.+|++|+
T Consensus        97 g~~a~~~~v~~~~~~~i-P~~~~~~-~aa~~~~~~~ta~~~~-~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi  172 (324)
T cd08291          97 GTYAEYAVADAQQCLPL-PDGVSFE-QGASSFVNPLTALGML-ETARE-EGAKAVVHTAAASALGRMLVRLCKADGIKVI  172 (324)
T ss_pred             CcchheeeecHHHeEEC-CCCCCHH-HHhhhcccHHHHHHHH-Hhhcc-CCCcEEEEccCccHHHHHHHHHHHHcCCEEE
Confidence            89999999999999999 9995544 3777888899998555 45555 55566665 7889999999999999999999


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNND  159 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~  159 (241)
                      ++++++++.+.++ ++|++++++++.. ++.+.+++.+++ ++|++||++|+......+++++++|+++.+|..+..+  
T Consensus       173 ~~~~~~~~~~~~~-~~g~~~~i~~~~~-~~~~~v~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~--  248 (324)
T cd08291         173 NIVRRKEQVDLLK-KIGAEYVLNSSDP-DFLEDLKELIAKLNATIFFDAVGGGLTGQILLAMPYGSTLYVYGYLSGKL--  248 (324)
T ss_pred             EEeCCHHHHHHHH-HcCCcEEEECCCc-cHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHhhCCCCEEEEEEecCCCC--
Confidence            9999999999999 8999999998887 888889888876 8999999999988888999999999999998743211  


Q ss_pred             CCCCccChHHHhhcceEEEEeecccc-cchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEEE
Q 026217          160 KPEGVHNLTCLISKRIRMEGFLVPDY-FHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVE  237 (241)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv~  237 (241)
                        ....+....+.+++++.++....+ .....+.+..+.+++. |.+++.++++|+|+++.+|++.+.+++..||+++.
T Consensus       249 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~l~~~~~a~~~~~~~~~~Gkvv~~  324 (324)
T cd08291         249 --DEPIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVKKLKKLVK-TELKTTFASRYPLALTLEAIAFYSKNMSTGKKLLI  324 (324)
T ss_pred             --cccCCHHHHhhcCcEEEEEEHHHhhcccCHHHHHHHHHHHh-CccccceeeEEcHHHHHHHHHHHHhCCCCCeEEeC
Confidence              112445567889999999887654 2223567888888888 99999999999999999999999999889999873

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=100.00  E-value=9.8e-32  Score=220.07  Aligned_cols=224  Identities=19%  Similarity=0.262  Sum_probs=189.0

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVV   80 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~   80 (241)
                      |+|+||+.+++..++++ |++++.. +++.+++++.|||+++.+...+++|++|+|+|+ |++|++++|+|+..|+ +|+
T Consensus       129 G~~aey~~v~~~~~~~i-p~~~~~~-~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi  205 (358)
T TIGR03451       129 GAFAEKTLVHAGQCTKV-DPAADPA-AAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGC-GGVGDAAIAGAALAGASKII  205 (358)
T ss_pred             ccccceEEEehhheEEC-CCCCChh-HhhhhcccchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEE
Confidence            78999999999999999 9885544 477888899999999877788999999999985 9999999999999999 599


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeecccCC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNN  158 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~  158 (241)
                      +++++++++++++ ++|+++++++++. ++.+.+++.+++ ++|+++||+|+ ..+..++++++++|+++.+|....   
T Consensus       206 ~~~~~~~~~~~~~-~~Ga~~~i~~~~~-~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~---  280 (358)
T TIGR03451       206 AVDIDDRKLEWAR-EFGATHTVNSSGT-DPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTP---  280 (358)
T ss_pred             EEcCCHHHHHHHH-HcCCceEEcCCCc-CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCC---
Confidence            9999999999998 9999999998876 888888888876 89999999996 688899999999999999997431   


Q ss_pred             CCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCcee--ccceeecCCcHHHHHHHhhcCCCcceEEE
Q 026217          159 DKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQVV  236 (241)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~l~~~~~~gk~vv  236 (241)
                       ......+...++.+++++.++......  ..+.+..+++++.+|.+++  .++++||++++.+|++.+++++.. |+++
T Consensus       281 -~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~  356 (358)
T TIGR03451       281 -DMTLELPLLDVFGRGGALKSSWYGDCL--PERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL-RSVV  356 (358)
T ss_pred             -CceeeccHHHHhhcCCEEEEeecCCCC--cHHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcc-eeEE
Confidence             111234556778889999887643211  1566888999999999975  578999999999999999988765 7776


Q ss_pred             E
Q 026217          237 E  237 (241)
Q Consensus       237 ~  237 (241)
                      .
T Consensus       357 ~  357 (358)
T TIGR03451       357 E  357 (358)
T ss_pred             e
Confidence            4

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=100.00  E-value=2.8e-32  Score=210.43  Aligned_cols=224  Identities=23%  Similarity=0.270  Sum_probs=194.6

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVV   80 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~   80 (241)
                      ++|+||.++++..++|+ +...++. .++.+.|...|.+-+..+.+++++|+++.|.| .|++|++++|-|+..|+ +|+
T Consensus       138 stFa~y~vv~~~s~vki-~~~~p~~-~a~llGCgV~TG~Gav~nta~v~~G~tvaV~G-lGgVGlaaI~gA~~agA~~Ii  214 (366)
T COG1062         138 STFAEYTVVHEISLVKI-DPDAPLE-KACLLGCGVTTGIGAVVNTAKVEPGDTVAVFG-LGGVGLAAIQGAKAAGAGRII  214 (366)
T ss_pred             ccchhheeecccceEEC-CCCCCcc-ceEEEeeeeccChHHhhhcccCCCCCeEEEEe-ccHhHHHHHHHHHHcCCceEE
Confidence            48999999999999999 7675555 37889999999999999999999999999999 69999999999999999 999


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeecccCCC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNND  159 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~  159 (241)
                      +++.+++++++++ +||+++++|.++..++.+.+.+++++++|++|||+|+ ..+++++.++.++|+.+.+|....    
T Consensus       215 AvD~~~~Kl~~A~-~fGAT~~vn~~~~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~----  289 (366)
T COG1062         215 AVDINPEKLELAK-KFGATHFVNPKEVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGA----  289 (366)
T ss_pred             EEeCCHHHHHHHH-hcCCceeecchhhhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCC----
Confidence            9999999999999 9999999999875258999999999999999999997 789999999999999999998552    


Q ss_pred             CCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCcee--ccceeecCCcHHHHHHHhhcCCCcceEEEE
Q 026217          160 KPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQVVE  237 (241)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~l~~~~~~gk~vv~  237 (241)
                      ....+.++..++.. .++.|+.++.-..  +.++..+++++.+|+|..  ++++.++|||+++||+.|++++.. |-|++
T Consensus       290 ~~~i~~~~~~lv~g-r~~~Gs~~G~~~p--~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~I-R~Vi~  365 (366)
T COG1062         290 GQEISTRPFQLVTG-RVWKGSAFGGARP--RSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSI-RSVIR  365 (366)
T ss_pred             CceeecChHHeecc-ceEEEEeecCCcc--ccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCcee-eEEec
Confidence            22233556666666 8899988875422  567899999999998874  788899999999999999999876 55554

>PLN02827 Alcohol dehydrogenase-like

Probab=100.00  E-value=3e-31  Score=218.27  Aligned_cols=226  Identities=19%  Similarity=0.242  Sum_probs=187.2

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVV   80 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~   80 (241)
                      |+|+||+.+|++.++++ |++++.. +++.+++++.++|+++.+.+++++|++|+|+|+ |++|++++|+|+.+|+ .|+
T Consensus       146 G~~aeyv~v~~~~~~~i-P~~l~~~-~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi  222 (378)
T PLN02827        146 SSFSEYTVVHSGCAVKV-DPLAPLH-KICLLSCGVAAGLGAAWNVADVSKGSSVVIFGL-GTVGLSVAQGAKLRGASQII  222 (378)
T ss_pred             ccceeeEEechhheEEC-CCCCCHH-HhhhhcchhHhhHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEE
Confidence            79999999999999999 9995544 377888888999998877788999999999985 9999999999999999 588


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCc-hhHHHHHHHHCCCCccEEEeCCCc-hhHHHHHHhhccC-CEEEEEeeecccC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEE-PDLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQ-GRITLCGMISQYN  157 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~-~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~  157 (241)
                      ++++++++.+.++ ++|+++++++++. .++.+.+++.+++++|++||++|. ..+..+++.++++ |+++.+|....  
T Consensus       223 ~~~~~~~~~~~a~-~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~--  299 (378)
T PLN02827        223 GVDINPEKAEKAK-TFGVTDFINPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKA--  299 (378)
T ss_pred             EECCCHHHHHHHH-HcCCcEEEcccccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCC--
Confidence            8888999999998 9999999988751 167777887776689999999997 4788999999998 99999987432  


Q ss_pred             CCCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCcee--ccceeecCCcHHHHHHHhhcCCCcceEE
Q 026217          158 NDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQV  235 (241)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~l~~~~~~gk~v  235 (241)
                         +....+...++.+++++.|+....+.  ....+..+++++.+|.+++  .++++|||+++.+|++.+.+++. +|+|
T Consensus       300 ---~~~~~~~~~~~~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~v  373 (378)
T PLN02827        300 ---KPEVSAHYGLFLSGRTLKGSLFGGWK--PKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKC-LRCV  373 (378)
T ss_pred             ---CccccccHHHHhcCceEEeeecCCCc--hhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCc-eEEE
Confidence               11111223567789999998765431  1346788999999999998  78899999999999999999886 6999


Q ss_pred             EEec
Q 026217          236 VEVA  239 (241)
Q Consensus       236 v~~~  239 (241)
                      |.+.
T Consensus       374 i~~~  377 (378)
T PLN02827        374 IHMP  377 (378)
T ss_pred             EEec
Confidence            9764

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=100.00  E-value=1.7e-31  Score=218.48  Aligned_cols=217  Identities=17%  Similarity=0.207  Sum_probs=179.0

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVG   81 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~   81 (241)
                      |+|+||+++|++.++++ |++++.. +++++++++.|||+++.+...+++|++|+|.|+ |++|++++|+|+.+|++|++
T Consensus       136 G~~aey~~v~~~~~~~l-P~~ls~~-~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~  212 (360)
T PLN02586        136 GGYSDMIVVDQHFVLRF-PDNLPLD-AGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTV  212 (360)
T ss_pred             CccceEEEEchHHeeeC-CCCCCHH-HhhhhhcchHHHHHHHHHhcccCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEE
Confidence            88999999999999999 9995555 478899999999999976666789999999885 99999999999999999988


Q ss_pred             EeCCHHHH-HHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeecccCCC
Q 026217           82 SAGSKDKV-DLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNND  159 (241)
Q Consensus        82 ~~~~~~~~-~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~  159 (241)
                      ++.++++. +.++ ++|+++++++++.    +.+++.++ ++|++||++|+ ..+..++++++++|+++.+|....    
T Consensus       213 ~~~~~~~~~~~~~-~~Ga~~vi~~~~~----~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~----  282 (360)
T PLN02586        213 ISSSSNKEDEAIN-RLGADSFLVSTDP----EKMKAAIG-TMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEK----  282 (360)
T ss_pred             EeCCcchhhhHHH-hCCCcEEEcCCCH----HHHHhhcC-CCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCC----
Confidence            87776654 4555 8999988887653    24444443 69999999997 578899999999999999986321    


Q ss_pred             CCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEEEec
Q 026217          160 KPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVA  239 (241)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv~~~  239 (241)
                        ....+...++.++..+.++....     .+.+.++++++.+|++++.+ ++|||+|+++||+.+.+++..||+|+++.
T Consensus       283 --~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~li~~g~i~~~~-~~~~l~~~~~A~~~~~~~~~~gkvvi~~~  354 (360)
T PLN02586        283 --PLELPIFPLVLGRKLVGGSDIGG-----IKETQEMLDFCAKHNITADI-ELIRMDEINTAMERLAKSDVRYRFVIDVA  354 (360)
T ss_pred             --CCccCHHHHHhCCeEEEEcCcCC-----HHHHHHHHHHHHhCCCCCcE-EEEeHHHHHHHHHHHHcCCCcEEEEEEcc
Confidence              12345556677788887877654     45688999999999999876 58999999999999999988899999863

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=4.5e-31  Score=216.72  Aligned_cols=217  Identities=17%  Similarity=0.201  Sum_probs=180.1

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcC-CCCCcEEEEEcCCchHHHHHHHHHHHcCCEEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCS-PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVV   80 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~-~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~   80 (241)
                      |+|+||+++|++.++++ |++++.. +++++++++.|||+++..... .++|++|+|.|+ |++|++++|+|+.+|++|+
T Consensus       130 G~~aey~~v~~~~~~~l-P~~ls~~-~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi  206 (375)
T PLN02178        130 GGYSDVIVVDHRFVLSI-PDGLPSD-SGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGL-GGLGHIAVKIGKAFGLRVT  206 (375)
T ss_pred             CccccEEEEchHHeEEC-CCCCCHH-HcchhhccchHHHHHHHHhCCCCCCCCEEEEEcc-cHHHHHHHHHHHHcCCeEE
Confidence            78999999999999999 9995544 377889999999999865433 368999999985 9999999999999999999


Q ss_pred             EEeCCHHH-HHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCch-hHHHHHHhhccCCEEEEEeeecccCC
Q 026217           81 GSAGSKDK-VDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGK-MLDAVLLNMRIQGRITLCGMISQYNN  158 (241)
Q Consensus        81 ~~~~~~~~-~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~  158 (241)
                      +++.++++ .+.++ ++|+++++++++.    +.+++.++ ++|++|||+|+. .+..++++++++|+++.+|....   
T Consensus       207 ~~~~~~~~~~~~a~-~lGa~~~i~~~~~----~~v~~~~~-~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~---  277 (375)
T PLN02178        207 VISRSSEKEREAID-RLGADSFLVTTDS----QKMKEAVG-TMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEK---  277 (375)
T ss_pred             EEeCChHHhHHHHH-hCCCcEEEcCcCH----HHHHHhhC-CCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCC---
Confidence            99877554 67777 9999998887542    34444443 699999999975 78899999999999999986321   


Q ss_pred             CCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEEEe
Q 026217          159 DKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  238 (241)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv~~  238 (241)
                         ....+...++.+++++.|+....     .+.+.++++++.+|++++.+ ++|||+++++|++.+.+++..||+|+++
T Consensus       278 ---~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~i~~~i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~  348 (375)
T PLN02178        278 ---PLDLPIFPLVLGRKMVGGSQIGG-----MKETQEMLEFCAKHKIVSDI-ELIKMSDINSAMDRLAKSDVRYRFVIDV  348 (375)
T ss_pred             ---CCccCHHHHHhCCeEEEEeCccC-----HHHHHHHHHHHHhCCCcccE-EEEeHHHHHHHHHHHHcCCCceEEEEEe
Confidence               12355667788999999987655     46788899999999999887 5799999999999999999889999987


Q ss_pred             c
Q 026217          239 A  239 (241)
Q Consensus       239 ~  239 (241)
                      .
T Consensus       349 ~  349 (375)
T PLN02178        349 A  349 (375)
T ss_pred             c
Confidence            3

>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.6e-31  Score=202.12  Aligned_cols=223  Identities=21%  Similarity=0.262  Sum_probs=193.3

Q ss_pred             ccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEE
Q 026217            3 GWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVG   81 (241)
Q Consensus         3 ~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~   81 (241)
                      +|+||.++++..+.+| ++..+++ ..+.+.+...|+|-|..+.+.++||+++.|+| .|++|+++++-|+..|+ ++|+
T Consensus       146 tFsEYTVv~~~~v~kI-d~~aPl~-kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfG-LG~VGLav~~Gaka~GAsrIIg  222 (375)
T KOG0022|consen  146 TFSEYTVVDDISVAKI-DPSAPLE-KVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFG-LGGVGLAVAMGAKAAGASRIIG  222 (375)
T ss_pred             cceeEEEeecceeEec-CCCCChh-heeEeeccccccchhhhhhcccCCCCEEEEEe-cchHHHHHHHhHHhcCcccEEE
Confidence            8999999999999999 7776776 58899999999999999999999999999999 69999999999999999 9999


Q ss_pred             EeCCHHHHHHHHHHcCCCeeecCCCch-hHHHHHHHHCCCCccEEEeCCCc-hhHHHHHHhhccC-CEEEEEeeecccCC
Q 026217           82 SAGSKDKVDLLKNKFGFDEAFNYKEEP-DLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQ-GRITLCGMISQYNN  158 (241)
Q Consensus        82 ~~~~~~~~~~~~~~~g~~~~i~~~~~~-~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~  158 (241)
                      ++.++++++.++ +||+++++|..+.. ++.+.|++++++|+|+.|||+|+ +.+++++.+++.+ |+-+.+|....   
T Consensus       223 vDiN~~Kf~~ak-~fGaTe~iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~---  298 (375)
T KOG0022|consen  223 VDINPDKFEKAK-EFGATEFINPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAA---  298 (375)
T ss_pred             EecCHHHHHHHH-hcCcceecChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCC---
Confidence            999999999999 99999999987421 58899999999999999999997 7889999999987 99999998653   


Q ss_pred             CCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCce--eccceeecCCcHHHHHHHhhcCCCcceEEE
Q 026217          159 DKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIV--YVEDKAEGLESAPAALVGLFSGRNVGKQVV  236 (241)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv  236 (241)
                       .......++.++. +.++.|+..+.++.  ++.+..+++.+.++.+.  ..+++.+||+++++||+.|.+++.. |.|+
T Consensus       299 -~~~i~~~p~~l~~-GR~~~Gs~FGG~K~--~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~Gksi-R~vl  373 (375)
T KOG0022|consen  299 -GQEISTRPFQLVT-GRTWKGSAFGGFKS--KSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSI-RCVL  373 (375)
T ss_pred             -Ccccccchhhhcc-ccEEEEEecccccc--hhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceE-EEEE
Confidence             2223344445554 77888888887644  67788888888888665  5888999999999999999999977 7776


Q ss_pred             E
Q 026217          237 E  237 (241)
Q Consensus       237 ~  237 (241)
                      .
T Consensus       374 ~  374 (375)
T KOG0022|consen  374 W  374 (375)
T ss_pred             e
Confidence            4

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=6.5e-31  Score=214.47  Aligned_cols=226  Identities=19%  Similarity=0.243  Sum_probs=181.3

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCE-EE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-VV   80 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~-v~   80 (241)
                      |+|+||+.++++.++++ |++  ++++.+++..++.++++++ +...++++++|+|+|+ |++|++++|+|+.+|++ |+
T Consensus       115 G~~aey~~v~~~~~~~l-P~~--~s~~~aa~~~~~~~~~~~~-~~~~~~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~v~  189 (347)
T PRK10309        115 GGNAEYIVVKRKNLFAL-PTD--MPIEDGAFIEPITVGLHAF-HLAQGCEGKNVIIIGA-GTIGLLAIQCAVALGAKSVT  189 (347)
T ss_pred             CccceeEEeehHHeEEC-cCC--CCHHHhhhhhHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEE
Confidence            89999999999999999 998  4544344444667788886 5678899999999984 99999999999999995 78


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-Ccc-EEEeCCCc-hhHHHHHHhhccCCEEEEEeeecccC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GIN-IYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYN  157 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d-~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~  157 (241)
                      ++++++++.+.++ ++|+++++++++. + .+++.+.+++ ++| ++|||+|+ ..+..++++++++|+++.+|..... 
T Consensus       190 ~~~~~~~~~~~~~-~~Ga~~~i~~~~~-~-~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~-  265 (347)
T PRK10309        190 AIDINSEKLALAK-SLGAMQTFNSREM-S-APQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHD-  265 (347)
T ss_pred             EECCCHHHHHHHH-HcCCceEecCccc-C-HHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC-
Confidence            8988999999998 9999999988765 5 5567766665 888 99999996 5889999999999999999874321 


Q ss_pred             CCCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCce--eccceeecCCcHHHHHHHhhcCCCcceEE
Q 026217          158 NDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIV--YVEDKAEGLESAPAALVGLFSGRNVGKQV  235 (241)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~l~~~~~a~~~l~~~~~~gk~v  235 (241)
                      .  +....+...++.+++++.|+..........+.++.+++++.+|.++  +.++++|+|+++++|++.+.+++..||+|
T Consensus       266 ~--~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvv  343 (347)
T PRK10309        266 L--HLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVL  343 (347)
T ss_pred             c--ccChhhhhHHhhcCcEEEEEeccccCCcchhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEE
Confidence            1  1111223456778999999766432111246788899999999885  67889999999999999999988889999


Q ss_pred             EEe
Q 026217          236 VEV  238 (241)
Q Consensus       236 v~~  238 (241)
                      +++
T Consensus       344 v~~  346 (347)
T PRK10309        344 LQI  346 (347)
T ss_pred             EeC
Confidence            975

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=1.1e-30  Score=211.32  Aligned_cols=209  Identities=17%  Similarity=0.135  Sum_probs=176.4

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVG   81 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~   81 (241)
                      |+|+||+.+++..++++ |++++.. +++++++++.|||+++. .+++++|++|+|+|+ |++|++++|+|+..|++|++
T Consensus       119 G~~aey~~v~~~~~~~l-P~~~~~~-~aa~l~~~~~ta~~~~~-~~~~~~g~~VlV~G~-g~iG~~a~~~a~~~G~~vi~  194 (329)
T TIGR02822       119 GGYAEYTTVPAAFAYRL-PTGYDDV-ELAPLLCAGIIGYRALL-RASLPPGGRLGLYGF-GGSAHLTAQVALAQGATVHV  194 (329)
T ss_pred             CcceeEEEeccccEEEC-CCCCCHH-HhHHHhccchHHHHHHH-hcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCeEEE
Confidence            89999999999999999 9995554 47789999999999995 578999999999997 99999999999999999999


Q ss_pred             EeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeecccCCCC
Q 026217           82 SAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDK  160 (241)
Q Consensus        82 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~  160 (241)
                      ++++++++++++ ++|+++++++.+. .         .+++|+++++.+. ..+..++++++++|+++.+|...+     
T Consensus       195 ~~~~~~~~~~a~-~~Ga~~vi~~~~~-~---------~~~~d~~i~~~~~~~~~~~~~~~l~~~G~~v~~G~~~~-----  258 (329)
T TIGR02822       195 MTRGAAARRLAL-ALGAASAGGAYDT-P---------PEPLDAAILFAPAGGLVPPALEALDRGGVLAVAGIHLT-----  258 (329)
T ss_pred             EeCChHHHHHHH-HhCCceecccccc-C---------cccceEEEECCCcHHHHHHHHHhhCCCcEEEEEeccCc-----
Confidence            999999999999 9999998875432 1         1258999988874 688899999999999999997421     


Q ss_pred             CCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEE
Q 026217          161 PEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVV  236 (241)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv  236 (241)
                      .....+...++.+++++.++....     ++.+.++++++.+|.+++ ++++|||+++++||+.+.+++..||+|+
T Consensus       259 ~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~i~~-i~~~~~l~~~~~A~~~~~~~~~~Gkvvl  328 (329)
T TIGR02822       259 DTPPLNYQRHLFYERQIRSVTSNT-----RADAREFLELAAQHGVRV-TTHTYPLSEADRALRDLKAGRFDGAAVL  328 (329)
T ss_pred             cCCCCCHHHHhhCCcEEEEeecCC-----HHHHHHHHHHHHhCCCee-EEEEEeHHHHHHHHHHHHcCCCceEEEe
Confidence            112344556777888888876543     556788899999999985 5789999999999999999999999987

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=100.00  E-value=1.4e-30  Score=212.62  Aligned_cols=220  Identities=21%  Similarity=0.289  Sum_probs=183.1

Q ss_pred             CccceEEeecCCceeeecCC------CCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHc
Q 026217            2 TGWEEYSLVTAPRLFKIQHT------DMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLV   75 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~------~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~   75 (241)
                      |+|+||+.+|.+.++++ |+      +++.. +++++++++.|||+++.+ ..+++|++|+|+|+ |++|++++|+|+..
T Consensus       114 G~~ae~~~v~~~~~~~i-p~~~~~~~~~~~~-~~a~~~~~~~ta~~a~~~-~~~~~g~~VlV~G~-G~vG~~a~~~a~~~  189 (349)
T TIGR03201       114 GGFASHIVVPAKGLCVV-DEARLAAAGLPLE-HVSVVADAVTTPYQAAVQ-AGLKKGDLVIVIGA-GGVGGYMVQTAKAM  189 (349)
T ss_pred             CcccceEEechHHeEEC-CcccccccCCCHH-HhhhhcchHHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHc
Confidence            89999999999999999 87      64444 377888999999999954 78999999999998 99999999999999


Q ss_pred             CCEEEEEeCCHHHHHHHHHHcCCCeeecCCCc--hhHHHHHHHHCCC-Ccc----EEEeCCCc-hhHHHHHHhhccCCEE
Q 026217           76 GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEE--PDLDAALKRYFPE-GIN----IYFENVGG-KMLDAVLLNMRIQGRI  147 (241)
Q Consensus        76 g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~--~~~~~~i~~~~~~-~~d----~v~d~~g~-~~~~~~~~~l~~~G~~  147 (241)
                      |++|++++++++++++++ ++|+++++++++.  .++.+.+++.+++ ++|    ++|||+|+ ..+..++++++++|++
T Consensus       190 G~~vi~~~~~~~~~~~~~-~~Ga~~~i~~~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~i  268 (349)
T TIGR03201       190 GAAVVAIDIDPEKLEMMK-GFGADLTLNPKDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHGGTL  268 (349)
T ss_pred             CCeEEEEcCCHHHHHHHH-HhCCceEecCccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcCCeE
Confidence            999999999999999998 9999988887653  1466777878776 776    89999997 4667889999999999


Q ss_pred             EEEeeecccCCCCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceec-cceeecCCcHHHHHHHhh
Q 026217          148 TLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYV-EDKAEGLESAPAALVGLF  226 (241)
Q Consensus       148 v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~l~~~~~a~~~l~  226 (241)
                      +.+|....      ....+...++.++.++.+.....     .+.+..+++++.+|.+++. +..+|||+++++||+.+.
T Consensus       269 v~~G~~~~------~~~~~~~~~~~~~~~~~g~~~~~-----~~~~~~~~~~i~~g~i~~~~~i~~~~l~~~~~A~~~~~  337 (349)
T TIGR03201       269 VVVGYTMA------KTEYRLSNLMAFHARALGNWGCP-----PDRYPAALDLVLDGKIQLGPFVERRPLDQIEHVFAAAH  337 (349)
T ss_pred             EEECcCCC------CcccCHHHHhhcccEEEEEecCC-----HHHHHHHHHHHHcCCCCcccceEEecHHHHHHHHHHHH
Confidence            99997432      12344456667778888876543     5568899999999999752 335799999999999999


Q ss_pred             cCCCcceEEEE
Q 026217          227 SGRNVGKQVVE  237 (241)
Q Consensus       227 ~~~~~gk~vv~  237 (241)
                      +++..||++++
T Consensus       338 ~~~~~~k~~~~  348 (349)
T TIGR03201       338 HHKLKRRAILT  348 (349)
T ss_pred             cCCccceEEec
Confidence            99888999885

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=99.98  E-value=2.9e-30  Score=211.94  Aligned_cols=225  Identities=20%  Similarity=0.233  Sum_probs=180.0

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVV   80 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~   80 (241)
                      |+|+||+++|++.++++ |++++.. +++.+++++.|||+++.+.+.+++|++|+|+|+ |++|++++|+|+.+|+ +|+
T Consensus       138 G~~aey~~v~~~~~~~l-P~~l~~~-~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi  214 (368)
T TIGR02818       138 STFSEYTVVPEISLAKI-NPAAPLE-EVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGL-GGIGLSVIQGARMAKASRII  214 (368)
T ss_pred             ccceeeEEechhheEEC-CCCCCHH-HhhhhcchhHHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEE
Confidence            58999999999999999 9995554 378888999999999977789999999999985 9999999999999999 899


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCc-hhHHHHHHHHCCCCccEEEeCCCc-hhHHHHHHhhccC-CEEEEEeeecccC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEE-PDLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQ-GRITLCGMISQYN  157 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~-~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~  157 (241)
                      ++++++++.+.++ ++|+++++++++. .++.+.+++.+++++|++|||+|+ ..+..++++++++ |+++.+|..... 
T Consensus       215 ~~~~~~~~~~~a~-~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~-  292 (368)
T TIGR02818       215 AIDINPAKFELAK-KLGATDCVNPNDYDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAG-  292 (368)
T ss_pred             EEcCCHHHHHHHH-HhCCCeEEcccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCC-
Confidence            9999999999998 9999999887641 156677877776689999999996 6788999999885 999999974321 


Q ss_pred             CCCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCce--eccceeecCCcHHHHHHHhhcCCCcceEE
Q 026217          158 NDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIV--YVEDKAEGLESAPAALVGLFSGRNVGKQV  235 (241)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~l~~~~~a~~~l~~~~~~gk~v  235 (241)
                         .....+...++. +..+.++.....  .....+.++++++.+|.++  +.++++|||+++++|++.+.+++. .|++
T Consensus       293 ---~~~~~~~~~~~~-~~~~~g~~~~~~--~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~-~k~~  365 (368)
T TIGR02818       293 ---QEISTRPFQLVT-GRVWRGSAFGGV--KGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS-IRTV  365 (368)
T ss_pred             ---CcccccHHHHhc-cceEEEeeccCC--CcHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCc-eeEE
Confidence               111122333332 344666544321  1145688899999999885  468899999999999999988765 5998


Q ss_pred             EEe
Q 026217          236 VEV  238 (241)
Q Consensus       236 v~~  238 (241)
                      +.+
T Consensus       366 v~~  368 (368)
T TIGR02818       366 IHY  368 (368)
T ss_pred             eeC
Confidence            864

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>PLN02740 Alcohol dehydrogenase-like

Probab=99.98  E-value=2e-30  Score=213.86  Aligned_cols=224  Identities=18%  Similarity=0.237  Sum_probs=183.6

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVV   80 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~   80 (241)
                      |+|+||++++.+.++++ |++++.. +++.+++++.|||+++.+.+++++|++|+|+|+ |++|++++|+|+.+|+ +|+
T Consensus       151 G~~aey~~v~~~~~~~i-P~~~~~~-~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi  227 (381)
T PLN02740        151 STFTEYTVLDSACVVKI-DPNAPLK-KMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGL-GAVGLAVAEGARARGASKII  227 (381)
T ss_pred             ccceeEEEEehHHeEEC-CCCCCHH-HhhhhcccchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCcEE
Confidence            79999999999999999 9985544 377888999999999877789999999999995 9999999999999999 699


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCc-hhHHHHHHHHCCCCccEEEeCCCc-hhHHHHHHhhccC-CEEEEEeeecccC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEE-PDLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQ-GRITLCGMISQYN  157 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~-~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~  157 (241)
                      ++++++++++.++ ++|+++++++++. .++.+.+++.+++++|++||++|+ ..+..++.+++++ |+++.+|..... 
T Consensus       228 ~~~~~~~r~~~a~-~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~-  305 (381)
T PLN02740        228 GVDINPEKFEKGK-EMGITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTP-  305 (381)
T ss_pred             EEcCChHHHHHHH-HcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCC-
Confidence            9999999999999 9999989887753 147778888776689999999996 6788999999896 999999874321 


Q ss_pred             CCCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCcee--ccceeecCCcHHHHHHHhhcCCCcceEE
Q 026217          158 NDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQV  235 (241)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~l~~~~~~gk~v  235 (241)
                         .....+...+ .++.++.|+....+..  ...+..+++++.+|.+++  .++++|||+|+++|++.+.+++. .|++
T Consensus       306 ---~~~~~~~~~~-~~~~~i~g~~~~~~~~--~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~-~k~~  378 (381)
T PLN02740        306 ---KMLPLHPMEL-FDGRSITGSVFGDFKG--KSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKA-LRCL  378 (381)
T ss_pred             ---ceecccHHHH-hcCCeEEEEecCCCCc--HHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCc-eeEE
Confidence               1111222223 3678888887654321  346788999999998865  67899999999999999988876 4998


Q ss_pred             EE
Q 026217          236 VE  237 (241)
Q Consensus       236 v~  237 (241)
                      |+
T Consensus       379 ~~  380 (381)
T PLN02740        379 LH  380 (381)
T ss_pred             Ee
Confidence            86

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=99.98  E-value=3e-30  Score=211.97  Aligned_cols=224  Identities=24%  Similarity=0.308  Sum_probs=180.4

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVV   80 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~   80 (241)
                      |+|+||++++++.++++ |++++.. +++.+++++.|||+++.+...+++|++|+|+|+ |++|++++|+|+.+|+ +|+
T Consensus       139 G~~aey~~v~~~~~~~i-P~~l~~~-~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi  215 (368)
T cd08300         139 STFSEYTVVAEISVAKI-NPEAPLD-KVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGL-GAVGLAVIQGAKAAGASRII  215 (368)
T ss_pred             ccceeEEEEchhceEeC-CCCCChh-hhhhhccchhhhHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEE
Confidence            58999999999999999 9995554 377888899999999878788999999999985 9999999999999999 799


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCch-hHHHHHHHHCCCCccEEEeCCCc-hhHHHHHHhhccC-CEEEEEeeecccC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEEP-DLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQ-GRITLCGMISQYN  157 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~-~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~  157 (241)
                      ++++++++.+.++ ++|+++++++++.. ++.+.+.+.+++++|+|+||+|+ ..+..++++++++ |+++.+|..... 
T Consensus       216 ~~~~~~~~~~~~~-~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~-  293 (368)
T cd08300         216 GIDINPDKFELAK-KFGATDCVNPKDHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAG-  293 (368)
T ss_pred             EEeCCHHHHHHHH-HcCCCEEEcccccchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCC-
Confidence            9999999999998 99999999887531 47788888777789999999996 6888999999886 999999874311 


Q ss_pred             CCCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCcee--ccceeecCCcHHHHHHHhhcCCCcceEE
Q 026217          158 NDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQV  235 (241)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~l~~~~~~gk~v  235 (241)
                         .....+...+. ++..+.++....+.  ..+.+..+++++.+|.+++  .++++|||+++++||+.+.+++. .|++
T Consensus       294 ---~~~~~~~~~~~-~~~~~~g~~~~~~~--~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~~  366 (368)
T cd08300         294 ---QEISTRPFQLV-TGRVWKGTAFGGWK--SRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKS-IRTV  366 (368)
T ss_pred             ---CccccCHHHHh-hcCeEEEEEecccC--cHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCC-ceee
Confidence               11112222232 33455665543321  2456788999999999885  57899999999999999988775 5888


Q ss_pred             EE
Q 026217          236 VE  237 (241)
Q Consensus       236 v~  237 (241)
                      ++
T Consensus       367 ~~  368 (368)
T cd08300         367 VK  368 (368)
T ss_pred             eC
Confidence            74

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=99.98  E-value=4.3e-30  Score=210.11  Aligned_cols=219  Identities=20%  Similarity=0.195  Sum_probs=182.2

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVG   81 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~   81 (241)
                      |+|+||+++|.+.++++ |++++.. +++++++++.|||+++.+....++|++++|+| +|++|++++|+|+.+|++|++
T Consensus       133 G~~aey~~v~~~~~~~i-P~~~~~~-~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G-~G~vG~~av~~Ak~~G~~vi~  209 (357)
T PLN02514        133 GGFASAMVVDQKFVVKI-PEGMAPE-QAAPLLCAGVTVYSPLSHFGLKQSGLRGGILG-LGGVGHMGVKIAKAMGHHVTV  209 (357)
T ss_pred             CccccEEEEchHHeEEC-CCCCCHH-HhhhhhhhHHHHHHHHHHcccCCCCCeEEEEc-ccHHHHHHHHHHHHCCCeEEE
Confidence            79999999999999999 9995555 47889999999999997766678999999997 599999999999999999999


Q ss_pred             EeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeecccCCCC
Q 026217           82 SAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDK  160 (241)
Q Consensus        82 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~  160 (241)
                      +++++++.+.+.+++|+++++++.+.    ..+.+.+. ++|++|||+|. ..+..++++++++|+++.+|....     
T Consensus       210 ~~~~~~~~~~~~~~~Ga~~~i~~~~~----~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~-----  279 (357)
T PLN02514        210 ISSSDKKREEALEHLGADDYLVSSDA----AEMQEAAD-SLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINT-----  279 (357)
T ss_pred             EeCCHHHHHHHHHhcCCcEEecCCCh----HHHHHhcC-CCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCC-----
Confidence            98888777666547999887765442    23444443 69999999995 678899999999999999997431     


Q ss_pred             CCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEEEecC
Q 026217          161 PEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVAT  240 (241)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv~~~~  240 (241)
                       ....+...++.++.++.|+....     ...+.++++++.+|.+++.+ ++|||+++.+||+.+.+++..||+++.++.
T Consensus       280 -~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~~~~~g~l~~~i-~~~~l~~~~~A~~~~~~~~~~gk~v~~~~~  352 (357)
T PLN02514        280 -PLQFVTPMLMLGRKVITGSFIGS-----MKETEEMLEFCKEKGLTSMI-EVVKMDYVNTAFERLEKNDVRYRFVVDVAG  352 (357)
T ss_pred             -CCcccHHHHhhCCcEEEEEecCC-----HHHHHHHHHHHHhCCCcCcE-EEEcHHHHHHHHHHHHcCCCceeEEEEccc
Confidence             12345566778899999987755     45688899999999998876 589999999999999999988999998763

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=99.98  E-value=1.4e-31  Score=231.07  Aligned_cols=229  Identities=19%  Similarity=0.261  Sum_probs=200.3

Q ss_pred             ccceEEeecCCceeeecCCCCCcchh-hhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEE
Q 026217            3 GWEEYSLVTAPRLFKIQHTDMPLSYY-TGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVG   81 (241)
Q Consensus         3 ~~ae~~~v~~~~~~~i~P~~~~~~~~-~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~   81 (241)
                      ++|+-+.++.+++|.+ |.+  ++.+ +++.|+.|.||||||..++..++|++|||++++|++|++|+.+|.++|++|+.
T Consensus      1506 sLATt~l~~rd~lWev-P~~--WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~~VFT 1582 (2376)
T KOG1202|consen 1506 SLATTVLASRDFLWEV-PSK--WTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGCTVFT 1582 (2376)
T ss_pred             hhhhhhhcchhhhhhC-Ccc--cchhhcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCCEEEE
Confidence            4677788899999999 998  5554 88999999999999999999999999999999999999999999999999999


Q ss_pred             EeCCHHHHHHHHHHcCC---CeeecCCCchhHHHHHHHHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccC
Q 026217           82 SAGSKDKVDLLKNKFGF---DEAFNYKEEPDLDAALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYN  157 (241)
Q Consensus        82 ~~~~~~~~~~~~~~~g~---~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~  157 (241)
                      |+.|.++.+++.+.|..   ..+-|.++. +|...+...++| |+|+|+|....+.++..++||+.+||+..+|.     
T Consensus      1583 TVGSaEKRefL~~rFPqLqe~~~~NSRdt-sFEq~vl~~T~GrGVdlVLNSLaeEkLQASiRCLa~~GRFLEIGK----- 1656 (2376)
T KOG1202|consen 1583 TVGSAEKREFLLKRFPQLQETNFANSRDT-SFEQHVLWHTKGRGVDLVLNSLAEEKLQASIRCLALHGRFLEIGK----- 1656 (2376)
T ss_pred             ecCcHHHHHHHHHhchhhhhhcccccccc-cHHHHHHHHhcCCCeeeehhhhhHHHHHHHHHHHHhcCeeeeecc-----
Confidence            99999999999866643   457788888 999999999999 99999999999999999999999999999997     


Q ss_pred             CCCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHH----HHcCCceeccceeecCCcHHHHHHHhhcCCCcce
Q 026217          158 NDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPR----IKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGK  233 (241)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk  233 (241)
                      +.........+..+.+|.+++|.-+..+.+--.+.|.++..+    ++.|.++|+++.+|+-.++++||++|.+++..||
T Consensus      1657 fDLSqNspLGMavfLkNvsfHGiLLDsvmege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~AFRfMasGKHIGK 1736 (2376)
T KOG1202|consen 1657 FDLSQNSPLGMAVFLKNVSFHGILLDSVMEGEEEMWREVAALVAEGIKSGVVRPLPTTVFHGQQVEDAFRFMASGKHIGK 1736 (2376)
T ss_pred             eecccCCcchhhhhhcccceeeeehhhhhcCcHHHHHHHHHHHHhhhccCceeccccccccHHHHHHHHHHHhccCccce
Confidence            344444566788999999999999888744434555555554    4557889999999999999999999999999999


Q ss_pred             EEEEecC
Q 026217          234 QVVEVAT  240 (241)
Q Consensus       234 ~vv~~~~  240 (241)
                      +|+++-.
T Consensus      1737 Vvikvr~ 1743 (2376)
T KOG1202|consen 1737 VVIKVRA 1743 (2376)
T ss_pred             EEEEEcc
Confidence            9999853

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=99.97  E-value=5.5e-30  Score=207.11  Aligned_cols=227  Identities=19%  Similarity=0.266  Sum_probs=193.0

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEE
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVV   80 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~   80 (241)
                      .|+|++|+.+++..++++ |++++.. +++.++..++|||+++ ..+++.+|++|+|+|++|.+|++++|+|+++|++++
T Consensus        92 ~g~~~~~~~~~~~~~~~i-p~~~~~~-~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~  168 (324)
T cd08292          92 HGTWAEYFVAPADGLVPL-PDGISDE-VAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGINVI  168 (324)
T ss_pred             CCcceeEEEEchHHeEEC-CCCCCHH-HhhhccccHHHHHHHH-HhhCCCCCCEEEEcccccHHHHHHHHHHHHCCCeEE
Confidence            389999999999999999 9995544 3778888899999998 457899999999999999999999999999999999


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNND  159 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~  159 (241)
                      ++++++++.+.++ ++|+++++++++. ++...+.+.+++ ++|++|||+|+.....++++++++|+++.+|...+    
T Consensus       169 ~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~~----  242 (324)
T cd08292         169 NLVRRDAGVAELR-ALGIGPVVSTEQP-GWQDKVREAAGGAPISVALDSVGGKLAGELLSLLGEGGTLVSFGSMSG----  242 (324)
T ss_pred             EEecCHHHHHHHH-hcCCCEEEcCCCc-hHHHHHHHHhCCCCCcEEEECCCChhHHHHHHhhcCCcEEEEEecCCC----
Confidence            9999999999998 7899889888877 888889888877 99999999998888899999999999999987421    


Q ss_pred             CCCCccChHHHhhcceEEEEeecccc-----cchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceE
Q 026217          160 KPEGVHNLTCLISKRIRMEGFLVPDY-----FHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQ  234 (241)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~  234 (241)
                       .....+....+.+++++.++....+     +....+.+..+++++.+|.+++.+.+.|+++++.+|++.+.++...+|+
T Consensus       243 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~~~~~~~a~~~~~~~~~~~kv  321 (324)
T cd08292         243 -EPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLLLPVEAVFDLGDAAKAAAASMRPGRAGKV  321 (324)
T ss_pred             -CCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCccccEecHHHHHHHHHHHHcCCCCceE
Confidence             1122344456779999999887543     2233567888999999999987777889999999999999988888898


Q ss_pred             EEE
Q 026217          235 VVE  237 (241)
Q Consensus       235 vv~  237 (241)
                      +++
T Consensus       322 vv~  324 (324)
T cd08292         322 LLR  324 (324)
T ss_pred             EeC
Confidence            873

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=99.97  E-value=5.1e-30  Score=209.54  Aligned_cols=217  Identities=21%  Similarity=0.263  Sum_probs=185.9

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVV   80 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~   80 (241)
                      |+|+||+.++.+.++++ |+++  +++.+++..++.|||+++ ..+.+++|++|+|+|+ |++|++++|+|+.+|+ +|+
T Consensus       127 g~~a~~~~~~~~~~~~l-P~~~--~~~~aa~~~~~~ta~~~l-~~~~~~~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~  201 (351)
T cd08233         127 GGFAEYVVVPAYHVHKL-PDNV--PLEEAALVEPLAVAWHAV-RRSGFKPGDTALVLGA-GPIGLLTILALKAAGASKII  201 (351)
T ss_pred             CceeeEEEechHHeEEC-cCCC--CHHHhhhccHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEE
Confidence            78999999999999999 9994  443444557889999999 6788999999999985 9999999999999999 899


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeecccCC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNN  158 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~  158 (241)
                      ++++++++.++++ ++|++.++++++. ++.+.+++.+++ ++|+++||+|+ ..+..++++++++|+++.+|...    
T Consensus       202 ~~~~~~~~~~~~~-~~ga~~~i~~~~~-~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~----  275 (351)
T cd08233         202 VSEPSEARRELAE-ELGATIVLDPTEV-DVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWE----  275 (351)
T ss_pred             EECCCHHHHHHHH-HhCCCEEECCCcc-CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCC----
Confidence            9999999999998 8999999999887 888889888776 79999999985 68889999999999999999743    


Q ss_pred             CCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCcee--ccceeecCCcH-HHHHHHhhcCCCc-ceE
Q 026217          159 DKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVY--VEDKAEGLESA-PAALVGLFSGRNV-GKQ  234 (241)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~-~~a~~~l~~~~~~-gk~  234 (241)
                        .....+...++.+++++.+.....     .+.++++++++.+|.+++  .++++|+++|+ ++|++.+.+++.. ||+
T Consensus       276 --~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~  348 (351)
T cd08233         276 --KPISFNPNDLVLKEKTLTGSICYT-----REDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKI  348 (351)
T ss_pred             --CCCccCHHHHHhhCcEEEEEeccC-----cchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEE
Confidence              122355667788999999886543     567889999999999964  57789999996 7999999998864 899


Q ss_pred             EE
Q 026217          235 VV  236 (241)
Q Consensus       235 vv  236 (241)
                      ||
T Consensus       349 v~  350 (351)
T cd08233         349 LV  350 (351)
T ss_pred             Ee
Confidence            87

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=99.97  E-value=1.5e-29  Score=207.99  Aligned_cols=223  Identities=20%  Similarity=0.250  Sum_probs=182.5

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVV   80 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~   80 (241)
                      |+|+||+++++..++++ |++++.. +++.+++++.|||+++.+..++++|++|+|+|+ |++|++++|+|+.+|+ +|+
T Consensus       140 G~~aey~~v~~~~~~~i-P~~~~~~-~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi  216 (369)
T cd08301         140 STFSEYTVVHVGCVAKI-NPEAPLD-KVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGL-GAVGLAVAEGARIRGASRII  216 (369)
T ss_pred             ccceeEEEEecccEEEC-CCCCCHH-HhhhhcchhhHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEE
Confidence            68999999999999999 9995554 477888999999999888889999999999985 9999999999999999 899


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCc-hhHHHHHHHHCCCCccEEEeCCCc-hhHHHHHHhhccC-CEEEEEeeecccC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEE-PDLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQ-GRITLCGMISQYN  157 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~-~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~  157 (241)
                      ++++++++.+.++ ++|++.++++.+. .++.+.+++.+++++|+++||+|+ ..+..++++++++ |+++.+|..... 
T Consensus       217 ~~~~~~~~~~~~~-~~Ga~~~i~~~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~-  294 (369)
T cd08301         217 GVDLNPSKFEQAK-KFGVTEFVNPKDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKD-  294 (369)
T ss_pred             EEcCCHHHHHHHH-HcCCceEEcccccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCC-
Confidence            9999999999998 9999988887652 156677877776689999999996 5678899999995 999999975321 


Q ss_pred             CCCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCcee--ccceeecCCcHHHHHHHhhcCCCcceEE
Q 026217          158 NDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQV  235 (241)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~l~~~~~~gk~v  235 (241)
                         .....+...+ .+++++.|+....+.  .+..++.+++++.+|.++.  .++++|||+++++|++.+.+++.. |++
T Consensus       295 ---~~~~~~~~~~-~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~  367 (369)
T cd08301         295 ---AVFSTHPMNL-LNGRTLKGTLFGGYK--PKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECL-RCI  367 (369)
T ss_pred             ---cccccCHHHH-hcCCeEEEEecCCCC--hHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCce-eEE
Confidence               1112232333 368899988765432  2456888999999998765  577899999999999999998864 887


Q ss_pred             E
Q 026217          236 V  236 (241)
Q Consensus       236 v  236 (241)
                      |
T Consensus       368 ~  368 (369)
T cd08301         368 L  368 (369)
T ss_pred             e
Confidence            6

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=99.97  E-value=2.2e-29  Score=206.67  Aligned_cols=223  Identities=20%  Similarity=0.252  Sum_probs=180.3

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVV   80 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~   80 (241)
                      |+|+||+.++++.++++ |++++.. +++.+++++.|||+++.+...+++|++|+|+|+ |++|++++|+|+++|+ +|+
T Consensus       137 g~~ae~~~v~~~~~~~l-P~~l~~~-~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~Vi  213 (365)
T cd08277         137 STFSQYTVVDENYVAKI-DPAAPLE-HVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGL-GAVGLSAIMGAKIAGASRII  213 (365)
T ss_pred             ccceeeEEEchhheEEC-CCCCCHH-HhhHhcchhHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEE
Confidence            68999999999999999 9995544 477888999999999877788999999999985 9999999999999999 799


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCc-hhHHHHHHHHCCCCccEEEeCCCc-hhHHHHHHhhccC-CEEEEEeeecccC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEE-PDLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQ-GRITLCGMISQYN  157 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~-~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~  157 (241)
                      ++++++++.+.++ ++|+++++++.+. .++.+.+++.+++++|++|||+|+ ..+..++++++++ |+++.+|...+. 
T Consensus       214 ~~~~~~~~~~~~~-~~ga~~~i~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~-  291 (365)
T cd08277         214 GVDINEDKFEKAK-EFGATDFINPKDSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGA-  291 (365)
T ss_pred             EEeCCHHHHHHHH-HcCCCcEeccccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCcc-
Confidence            9999999999998 9999988887652 145677777766789999999995 6778899999884 999999874321 


Q ss_pred             CCCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCce--eccceeecCCcHHHHHHHhhcCCCcceEE
Q 026217          158 NDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIV--YVEDKAEGLESAPAALVGLFSGRNVGKQV  235 (241)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~l~~~~~a~~~l~~~~~~gk~v  235 (241)
                          ....+...++. +.++.++....+.  ....+..+++++.++.++  +.++++|+|+++++|++.+.+++ ..|++
T Consensus       292 ----~~~~~~~~~~~-~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~-~~k~~  363 (365)
T cd08277         292 ----ELSIRPFQLIL-GRTWKGSFFGGFK--SRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGE-CIRTV  363 (365)
T ss_pred             ----ccccCHhHHhh-CCEEEeeecCCCC--hHHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCC-CceEe
Confidence                11223333443 7788887765432  134678899999988655  57889999999999999998887 45887


Q ss_pred             EE
Q 026217          236 VE  237 (241)
Q Consensus       236 v~  237 (241)
                      ++
T Consensus       364 i~  365 (365)
T cd08277         364 IT  365 (365)
T ss_pred             eC
Confidence            63

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=99.97  E-value=7.5e-29  Score=200.46  Aligned_cols=227  Identities=24%  Similarity=0.328  Sum_probs=192.8

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVG   81 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~   81 (241)
                      |+|++|+.++...++++ |++++.. +++++++.++||| ++.....++++++|+|+|++|++|++++++|+.+|++|++
T Consensus        96 g~~~~~~~v~~~~~~~l-p~~~~~~-~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~  172 (324)
T cd08244          96 GGYAELAVADVDSLHPV-PDGLDLE-AAVAVVHDGRTAL-GLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGATVVG  172 (324)
T ss_pred             ceeeEEEEEchHHeEeC-CCCCCHH-HHhhhcchHHHHH-HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEE
Confidence            78999999999999999 9995555 4778999999995 5557788999999999999999999999999999999999


Q ss_pred             EeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCCC
Q 026217           82 SAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDK  160 (241)
Q Consensus        82 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~  160 (241)
                      +++++++.+.++ ++|++.++++++. ++.+.+....++ ++|+++||+|+.....++++++++|+++.+|.....    
T Consensus       173 ~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~----  246 (324)
T cd08244         173 AAGGPAKTALVR-ALGADVAVDYTRP-DWPDQVREALGGGGVTVVLDGVGGAIGRAALALLAPGGRFLTYGWASGE----  246 (324)
T ss_pred             EeCCHHHHHHHH-HcCCCEEEecCCc-cHHHHHHHHcCCCCceEEEECCChHhHHHHHHHhccCcEEEEEecCCCC----
Confidence            999999999998 8999888888876 778888877776 899999999988889999999999999999874321    


Q ss_pred             CCCccChHHHhhcceEEEEeecccc-cchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEEEe
Q 026217          161 PEGVHNLTCLISKRIRMEGFLVPDY-FHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  238 (241)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv~~  238 (241)
                       ....+....+.+++++.+...... +....+.+.++++++.++.+.+.+...++++++.+|++.+++++..||+++++
T Consensus       247 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  324 (324)
T cd08244         247 -WTALDEDDARRRGVTVVGLLGVQAERGGLRALEARALAEAAAGRLVPVVGQTFPLERAAEAHAALEARSTVGKVLLLP  324 (324)
T ss_pred             -CCccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHHHHHCCCccCccceEEeHHHHHHHHHHHHcCCCCceEEEeC
Confidence             112333456788999888876543 23446778889999999999888878999999999999999998899999864

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=99.97  E-value=5.4e-29  Score=206.37  Aligned_cols=223  Identities=20%  Similarity=0.294  Sum_probs=186.5

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHh--cCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEV--CSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYV   79 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~--~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v   79 (241)
                      |+|+||+.++...++++ |++++.. +++.+++++.|||+++...  ++++++++|+|+|++|++|++++++|+++|+++
T Consensus       144 g~~a~y~~v~~~~l~~i-P~~l~~~-~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~v  221 (393)
T cd08246         144 GSFAQFALVQATQLMPK-PKHLSWE-EAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANP  221 (393)
T ss_pred             CcceeEEEechHHeEEC-CCCCCHH-HHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCeE
Confidence            89999999999999999 9995544 3778999999999998655  678999999999999999999999999999999


Q ss_pred             EEEeCCHHHHHHHHHHcCCCeeecCCCc---------------------hhHHHHHHHHCCC--CccEEEeCCCchhHHH
Q 026217           80 VGSAGSKDKVDLLKNKFGFDEAFNYKEE---------------------PDLDAALKRYFPE--GINIYFENVGGKMLDA  136 (241)
Q Consensus        80 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~---------------------~~~~~~i~~~~~~--~~d~v~d~~g~~~~~~  136 (241)
                      +++++++++.+.++ ++|+++++++++.                     ..+.+.+.+++++  ++|+++||+|+..+..
T Consensus       222 v~~~~s~~~~~~~~-~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~~~~  300 (393)
T cd08246         222 VAVVSSEEKAEYCR-ALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRATFPT  300 (393)
T ss_pred             EEEeCCHHHHHHHH-HcCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHhHHH
Confidence            99999999999999 8999888876432                     0245667777665  7999999999888899


Q ss_pred             HHHhhccCCEEEEEeeecccCCCCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCC
Q 026217          137 VLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLE  216 (241)
Q Consensus       137 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~  216 (241)
                      ++++++++|+++.+|.....+     ...+...++.++.++.+.....     .+.+..+++++.++.+.+.+.++|+++
T Consensus       301 ~~~~l~~~G~~v~~g~~~~~~-----~~~~~~~l~~~~~~i~g~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~l~  370 (393)
T cd08246         301 SVFVCDRGGMVVICAGTTGYN-----HTYDNRYLWMRQKRIQGSHFAN-----DREAAEANRLVMKGRIDPCLSKVFSLD  370 (393)
T ss_pred             HHHHhccCCEEEEEcccCCCC-----CCCcHHHHhhheeEEEecccCc-----HHHHHHHHHHHHcCCceeeeeEEEeHH
Confidence            999999999999998643211     2234456667788888876654     456788899999999988778899999


Q ss_pred             cHHHHHHHhhcC-CCcceEEEE
Q 026217          217 SAPAALVGLFSG-RNVGKQVVE  237 (241)
Q Consensus       217 ~~~~a~~~l~~~-~~~gk~vv~  237 (241)
                      +++++++.+.++ +..||+++-
T Consensus       371 ~~~~a~~~~~~~~~~~gkvvv~  392 (393)
T cd08246         371 ETPDAHQLMHRNQHHVGNMAVL  392 (393)
T ss_pred             HHHHHHHHHHhCccccceEEEe
Confidence            999999999998 788999874

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=99.97  E-value=7.8e-29  Score=201.22  Aligned_cols=224  Identities=25%  Similarity=0.282  Sum_probs=184.3

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EE
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YV   79 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v   79 (241)
                      .|+|+||+.+|.+++++++|+++  +.+++++..++.+++++........++++|+|+|+ |++|++++++++..|+ +|
T Consensus       120 ~G~~aEyv~vp~~~~~~~~pd~~--~~~~aal~epla~~~~~~a~~~~~~~~~~V~V~Ga-GpIGLla~~~a~~~Ga~~V  196 (350)
T COG1063         120 DGGFAEYVRVPADFNLAKLPDGI--DEEAAALTEPLATAYHGHAERAAVRPGGTVVVVGA-GPIGLLAIALAKLLGASVV  196 (350)
T ss_pred             CCceEEEEEeccccCeecCCCCC--ChhhhhhcChhhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCceE
Confidence            38999999999877666537774  55689999999999888555556677779999995 9999999999999998 89


Q ss_pred             EEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeecccC
Q 026217           80 VGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYN  157 (241)
Q Consensus        80 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~  157 (241)
                      ++++.++++++++++..|++.+++...+ +....+.+.+++ ++|++|||+|. ..+.+++++++++|+++.+|..... 
T Consensus       197 iv~d~~~~Rl~~A~~~~g~~~~~~~~~~-~~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~-  274 (350)
T COG1063         197 IVVDRSPERLELAKEAGGADVVVNPSED-DAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGE-  274 (350)
T ss_pred             EEeCCCHHHHHHHHHhCCCeEeecCccc-cHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCc-
Confidence            9999999999999933777777766665 677788888888 99999999996 5789999999999999999985431 


Q ss_pred             CCCCCCccChHHHhhcceEEEEeec-ccccchhHHHHHHHHHHHHcCCcee--ccceeecCCcHHHHHHHhhcCCC-cce
Q 026217          158 NDKPEGVHNLTCLISKRIRMEGFLV-PDYFHLYPKFLEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRN-VGK  233 (241)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~l~~~~~-~gk  233 (241)
                          ....+...++.+++++.|+.. ..     ...++.+++++.+|++++  .+++.++++++++|++.+.+++. ..|
T Consensus       275 ----~~~~~~~~~~~kel~l~gs~~~~~-----~~~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~K  345 (350)
T COG1063         275 ----DIPLPAGLVVSKELTLRGSLRPSG-----REDFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIK  345 (350)
T ss_pred             ----cCccCHHHHHhcccEEEeccCCCC-----cccHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEE
Confidence                114667789999999999844 22     457889999999999986  45678889999999999998654 558


Q ss_pred             EEEEe
Q 026217          234 QVVEV  238 (241)
Q Consensus       234 ~vv~~  238 (241)
                      +++.+
T Consensus       346 v~i~~  350 (350)
T COG1063         346 VVLKP  350 (350)
T ss_pred             EEecC
Confidence            88753

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=99.97  E-value=1e-28  Score=205.42  Aligned_cols=224  Identities=16%  Similarity=0.155  Sum_probs=176.7

Q ss_pred             CccceEEeecCC----ceeeecCCCCCcchhhhhcCchhH---HHHHHH--------HHhcCCCCCcEEEEEcCCchHHH
Q 026217            2 TGWEEYSLVTAP----RLFKIQHTDMPLSYYTGILGMPGM---TAYAGF--------FEVCSPKQGEYVFVSAASGAVGQ   66 (241)
Q Consensus         2 G~~ae~~~v~~~----~~~~i~P~~~~~~~~~a~l~~~~~---ta~~~l--------~~~~~~~~~~~vlI~ga~g~~G~   66 (241)
                      |+|+||++++++    .++++ |++  ++++.+++..++.   +++.++        .+.+++++|++|+|+|++|++|+
T Consensus       114 G~~aey~~v~~~~~~~~~~~l-P~~--l~~~~aal~epl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~  190 (410)
T cd08238         114 GGLATYHIIPNEVMEQDCLLI-YEG--DGYAEASLVEPLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGL  190 (410)
T ss_pred             CcceEEEEecHHhccCCeEEC-CCC--CCHHHHhhcchHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHH
Confidence            899999999997    58999 998  4443444433322   233332        24567899999999998899999


Q ss_pred             HHHHHHHHcCC---EEEEEeCCHHHHHHHHHHc--------CCC-eeecCCC-chhHHHHHHHHCCC-CccEEEeCCCc-
Q 026217           67 LVGQFAKLVGC---YVVGSAGSKDKVDLLKNKF--------GFD-EAFNYKE-EPDLDAALKRYFPE-GINIYFENVGG-  131 (241)
Q Consensus        67 ~avqla~~~g~---~v~~~~~~~~~~~~~~~~~--------g~~-~~i~~~~-~~~~~~~i~~~~~~-~~d~v~d~~g~-  131 (241)
                      +++|+|+++|+   +|+++++++++++.++ ++        |++ .++++++ . ++.+.+++.+++ ++|+++|++|+ 
T Consensus       191 ~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~-~~~~~~~~~~Ga~~~~i~~~~~~-~~~~~v~~~t~g~g~D~vid~~g~~  268 (410)
T cd08238         191 MAIDYAIHGPIGPSLLVVTDVNDERLARAQ-RLFPPEAASRGIELLYVNPATID-DLHATLMELTGGQGFDDVFVFVPVP  268 (410)
T ss_pred             HHHHHHHhcccCCceEEEEcCCHHHHHHHH-HhccccccccCceEEEECCCccc-cHHHHHHHHhCCCCCCEEEEcCCCH
Confidence            99999999864   8999999999999999 76        665 5677754 4 688888888877 89999999984 


Q ss_pred             hhHHHHHHhhccCCEEEEEeeecccCCCCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCcee--cc
Q 026217          132 KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVY--VE  209 (241)
Q Consensus       132 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~  209 (241)
                      ..+..++++++++|+++.++.....   .....++...++.+++++.|+....     .+.++++++++.+|++++  .+
T Consensus       269 ~~~~~a~~~l~~~G~~v~~~g~~~~---~~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~li~~g~i~~~~~i  340 (410)
T cd08238         269 ELVEEADTLLAPDGCLNFFAGPVDK---NFSAPLNFYNVHYNNTHYVGTSGGN-----TDDMKEAIDLMAAGKLNPARMV  340 (410)
T ss_pred             HHHHHHHHHhccCCeEEEEEccCCC---CccccccHHHhhhcCcEEEEeCCCC-----HHHHHHHHHHHHcCCCchhhcE
Confidence            7889999999999988877542111   0112355667888999999987544     567888999999999987  67


Q ss_pred             ceeecCCcHHHHHHHhhcCCCcceEEEEec
Q 026217          210 DKAEGLESAPAALVGLFSGRNVGKQVVEVA  239 (241)
Q Consensus       210 ~~~~~l~~~~~a~~~l~~~~~~gk~vv~~~  239 (241)
                      +++|||+++++|++.+. ++..||+|+.++
T Consensus       341 t~~~~l~~~~~A~~~~~-~~~~gKvvl~~~  369 (410)
T cd08238         341 THIGGLNAAAETTLNLP-GIPGGKKLIYTQ  369 (410)
T ss_pred             EEEecHHHHHHHHHHhh-ccCCceEEEECC
Confidence            89999999999999999 777899999863

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.97  E-value=1.3e-28  Score=199.78  Aligned_cols=216  Identities=23%  Similarity=0.291  Sum_probs=185.0

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVG   81 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~   81 (241)
                      |+++||+.++.+.++++ |++++.. +++.++.+++|||+++.. ..+.++++|+|+| +|++|++++|+|+++|++|++
T Consensus       117 g~~a~~~~v~~~~~~~l-p~~~~~~-~aa~l~~~~~ta~~~~~~-~~~~~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~  192 (333)
T cd08296         117 GGYAEYMLAPAEALARI-PDDLDAA-EAAPLLCAGVTTFNALRN-SGAKPGDLVAVQG-IGGLGHLAVQYAAKMGFRTVA  192 (333)
T ss_pred             CcceeEEEEchhheEeC-CCCCCHH-HhhhhhhhhHHHHHHHHh-cCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEE
Confidence            78999999999999999 9995544 377899999999999965 4899999999999 799999999999999999999


Q ss_pred             EeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCC-chhHHHHHHhhccCCEEEEEeeecccCCCC
Q 026217           82 SAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDK  160 (241)
Q Consensus        82 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~  160 (241)
                      +++++++.+.++ ++|+++++++++. ++...++..  +++|+++|++| +..+...+++++++|+++.+|...      
T Consensus       193 ~~~~~~~~~~~~-~~g~~~~i~~~~~-~~~~~~~~~--~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~------  262 (333)
T cd08296         193 ISRGSDKADLAR-KLGAHHYIDTSKE-DVAEALQEL--GGAKLILATAPNAKAISALVGGLAPRGKLLILGAAG------  262 (333)
T ss_pred             EeCChHHHHHHH-HcCCcEEecCCCc-cHHHHHHhc--CCCCEEEECCCchHHHHHHHHHcccCCEEEEEecCC------
Confidence            999999999998 9999999988876 777777665  36999999997 578889999999999999998743      


Q ss_pred             CCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEEE
Q 026217          161 PEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVE  237 (241)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv~  237 (241)
                      ...+.+...++.+++++.+.....     ...+..+++++.++.+++.+ ..||++++.+|++.+.+++..||+|++
T Consensus       263 ~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~~~~~~~l~~~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~  333 (333)
T cd08296         263 EPVAVSPLQLIMGRKSIHGWPSGT-----ALDSEDTLKFSALHGVRPMV-ETFPLEKANEAYDRMMSGKARFRVVLT  333 (333)
T ss_pred             CCCCcCHHHHhhcccEEEEeCcCC-----HHHHHHHHHHHHhCCCCceE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence            122345566778999999987544     45677888888899888775 589999999999999999999999874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=99.97  E-value=6.1e-29  Score=187.08  Aligned_cols=229  Identities=22%  Similarity=0.331  Sum_probs=188.4

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEE
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVV   80 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~   80 (241)
                      .|+|++|.+.+++.++++ ++.+++. .||++..+.+|||.+|.+.-++.+||+|+-.||++++|++.+|+|+++|++-+
T Consensus       112 lGtW~t~~v~~e~~Li~v-d~~~pl~-~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~Gikti  189 (354)
T KOG0025|consen  112 LGTWRTEAVFSESDLIKV-DKDIPLA-SAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTI  189 (354)
T ss_pred             CccceeeEeecccceEEc-CCcCChh-hhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCcceE
Confidence            489999999999999999 8888877 59999999999999999999999999999999999999999999999999888


Q ss_pred             EEeCCHHHHHHHHH---HcCCCeeecCCCchhHHHHHHHH-CCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEeeecc
Q 026217           81 GSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRY-FPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQ  155 (241)
Q Consensus        81 ~~~~~~~~~~~~~~---~~g~~~~i~~~~~~~~~~~i~~~-~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~  155 (241)
                      -++|+....+.+++   .+|+++||...+- . ....... ... ++...|||+|+.....+.+.|.+||..+++|..+.
T Consensus       190 nvVRdR~~ieel~~~Lk~lGA~~ViTeeel-~-~~~~~k~~~~~~~prLalNcVGGksa~~iar~L~~GgtmvTYGGMSk  267 (354)
T KOG0025|consen  190 NVVRDRPNIEELKKQLKSLGATEVITEEEL-R-DRKMKKFKGDNPRPRLALNCVGGKSATEIARYLERGGTMVTYGGMSK  267 (354)
T ss_pred             EEeecCccHHHHHHHHHHcCCceEecHHHh-c-chhhhhhhccCCCceEEEeccCchhHHHHHHHHhcCceEEEecCccC
Confidence            88888766655543   5899999854431 1 1112212 122 79999999999998999999999999999999654


Q ss_pred             cCCCCCCCccChHHHhhcceEEEEeecccc------cchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcC-
Q 026217          156 YNNDKPEGVHNLTCLISKRIRMEGFLVPDY------FHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSG-  228 (241)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~-  228 (241)
                           ...+.+...++++++.++|+++..|      ++...+.+.++.+++..|+++.......||++-..|++..-+. 
T Consensus       268 -----qPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~~~e~v~L~~~~tald~~L~~~  342 (354)
T KOG0025|consen  268 -----QPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAPNCEKVPLADHKTALDAALSKF  342 (354)
T ss_pred             -----CCcccccchheeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeeccccceeeechhhhHHHHHHHHHh
Confidence                 3445666788999999999999887      4556688899999999999999998999999988888855543 


Q ss_pred             CCcceEEEEe
Q 026217          229 RNVGKQVVEV  238 (241)
Q Consensus       229 ~~~gk~vv~~  238 (241)
                      ...||-++.+
T Consensus       343 ~~~~Kq~i~~  352 (354)
T KOG0025|consen  343 GKSGKQIIVL  352 (354)
T ss_pred             ccCCceEEEe
Confidence            3335666654

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=99.97  E-value=7e-29  Score=201.80  Aligned_cols=211  Identities=17%  Similarity=0.156  Sum_probs=163.5

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHh--cCCCCCcEEEEEcCCchHHHHHHHHHHH-cC-C
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEV--CSPKQGEYVFVSAASGAVGQLVGQFAKL-VG-C   77 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~--~~~~~~~~vlI~ga~g~~G~~avqla~~-~g-~   77 (241)
                      |+|+||+++|+++++++ |++  ++++.|+++.+++++|+++.+.  ..+++|++|+|.|+ |++|++++|++++ .| .
T Consensus       115 G~~aey~~v~~~~~~~v-P~~--l~~~~aa~~~~~~~a~~a~~~~~~~~~~~g~~VlV~G~-G~vGl~~~~~a~~~~g~~  190 (341)
T cd08237         115 GFMQDYVFLPPDRLVKL-PDN--VDPEVAAFTELVSVGVHAISRFEQIAHKDRNVIGVWGD-GNLGYITALLLKQIYPES  190 (341)
T ss_pred             CceEEEEEEchHHeEEC-CCC--CChHHhhhhchHHHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHhcCCC
Confidence            88999999999999999 999  5545567788999999998653  35789999999995 9999999999987 55 5


Q ss_pred             EEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCc----hhHHHHHHhhccCCEEEEEeee
Q 026217           78 YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG----KMLDAVLLNMRIQGRITLCGMI  153 (241)
Q Consensus        78 ~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~g~~  153 (241)
                      +|+++++++++++.++ +.+.+..++     ++.+.      .++|+|||++|+    ..+..++++++++|+++.+|..
T Consensus       191 ~vi~~~~~~~k~~~a~-~~~~~~~~~-----~~~~~------~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~  258 (341)
T cd08237         191 KLVVFGKHQEKLDLFS-FADETYLID-----DIPED------LAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVS  258 (341)
T ss_pred             cEEEEeCcHhHHHHHh-hcCceeehh-----hhhhc------cCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeec
Confidence            8999999999999998 666543221     11111      169999999994    4688999999999999999963


Q ss_pred             cccCCCCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcC-----CceeccceeecCCcHHHHHHHhhcC
Q 026217          154 SQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEG-----KIVYVEDKAEGLESAPAALVGLFSG  228 (241)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-----~~~~~~~~~~~l~~~~~a~~~l~~~  228 (241)
                      ..      ....+...++.+++++.++....     .+.+.++++++.+|     .+++.++++|+++++.++.+.+++.
T Consensus       259 ~~------~~~~~~~~~~~k~~~i~g~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~  327 (341)
T cd08237         259 EY------PVPINTRMVLEKGLTLVGSSRST-----REDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESD  327 (341)
T ss_pred             CC------CcccCHHHHhhCceEEEEecccC-----HHHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHH
Confidence            21      12345567788999999986543     45688899999988     5778888999986554444444432


Q ss_pred             C--CcceEEEEec
Q 026217          229 R--NVGKQVVEVA  239 (241)
Q Consensus       229 ~--~~gk~vv~~~  239 (241)
                      .  ..||+|++++
T Consensus       328 ~~~~~gKvvi~~~  340 (341)
T cd08237         328 LTNSWGKTVMEWE  340 (341)
T ss_pred             hhcCcceEEEEee
Confidence            2  6799999875

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=99.97  E-value=1.3e-28  Score=202.03  Aligned_cols=222  Identities=20%  Similarity=0.230  Sum_probs=178.5

Q ss_pred             CccceEEeecCC-ceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EE
Q 026217            2 TGWEEYSLVTAP-RLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YV   79 (241)
Q Consensus         2 G~~ae~~~v~~~-~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v   79 (241)
                      |+|+||+.++++ .++++ |++++.. +++.++++++|||+++.+...++++++|||+| +|++|++++|+|+++|+ +|
T Consensus       129 g~~a~~~~v~~~~~~~~l-P~~~~~~-~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g-~g~vG~~~~~lak~~G~~~v  205 (361)
T cd08231         129 GGYAEHIYLPPGTAIVRV-PDNVPDE-VAAPANCALATVLAALDRAGPVGAGDTVVVQG-AGPLGLYAVAAAKLAGARRV  205 (361)
T ss_pred             cccceEEEecCCCceEEC-CCCCCHH-HHHHhcCHHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeE
Confidence            789999999996 79999 9884433 36677799999999997766677999999998 59999999999999999 99


Q ss_pred             EEEeCCHHHHHHHHHHcCCCeeecCCCchhH---HHHHHHHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeec
Q 026217           80 VGSAGSKDKVDLLKNKFGFDEAFNYKEEPDL---DAALKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMIS  154 (241)
Q Consensus        80 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~---~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~  154 (241)
                      +++++++++.++++ ++|++.++++++. +.   ...+.+.+++ ++|++|||+|+ ..+...+++++++|+++.+|...
T Consensus       206 ~~~~~~~~~~~~~~-~~g~~~vi~~~~~-~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  283 (361)
T cd08231         206 IVIDGSPERLELAR-EFGADATIDIDEL-PDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVA  283 (361)
T ss_pred             EEEcCCHHHHHHHH-HcCCCeEEcCccc-ccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCC
Confidence            99999999999998 9999888887654 33   3567777776 89999999986 67889999999999999998643


Q ss_pred             ccCCCCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcC----CceeccceeecCCcHHHHHHHhhcCCC
Q 026217          155 QYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEG----KIVYVEDKAEGLESAPAALVGLFSGRN  230 (241)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g----~~~~~~~~~~~l~~~~~a~~~l~~~~~  230 (241)
                      .    ......+...++.+++++.++....     .+.+.++++++.++    .+.+.++++|+++++++|++.+++++.
T Consensus       284 ~----~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~  354 (361)
T cd08231         284 P----AGTVPLDPERIVRKNLTIIGVHNYD-----PSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTA  354 (361)
T ss_pred             C----CCccccCHHHHhhcccEEEEcccCC-----chhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCc
Confidence            1    1111233445688899998887644     34466666777665    345577889999999999999988774


Q ss_pred             cceEEEEe
Q 026217          231 VGKQVVEV  238 (241)
Q Consensus       231 ~gk~vv~~  238 (241)
                       +|+||++
T Consensus       355 -~k~vi~~  361 (361)
T cd08231         355 -LKVVIDP  361 (361)
T ss_pred             -eEEEeCC
Confidence             7999863

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=99.97  E-value=1.8e-28  Score=198.12  Aligned_cols=228  Identities=22%  Similarity=0.312  Sum_probs=193.4

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEE
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVV   80 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~   80 (241)
                      .|+|++|+.++...++++ |++++.. +++.++..+++||+++.....+.++++|+|+|++|.+|++++|+|+.+|++++
T Consensus        90 ~g~~~~~~~~~~~~~~~l-p~~~~~~-~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~  167 (323)
T cd05282          90 EGTWQEYVVAPADDLIPV-PDSISDE-QAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFKTI  167 (323)
T ss_pred             CCcceeEEecCHHHeEEC-CCCCCHH-HHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCCeEE
Confidence            378999999999999999 9985544 47788899999999998888899999999999999999999999999999999


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNND  159 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~  159 (241)
                      ++++++++.+.++ ++|+++++++++. ++...+...+++ ++|+++||+|+......+++++++|+++.+|.....   
T Consensus       168 ~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~---  242 (323)
T cd05282         168 NVVRRDEQVEELK-ALGADEVIDSSPE-DLAQRVKEATGGAGARLALDAVGGESATRLARSLRPGGTLVNYGLLSGE---  242 (323)
T ss_pred             EEecChHHHHHHH-hcCCCEEecccch-hHHHHHHHHhcCCCceEEEECCCCHHHHHHHHhhCCCCEEEEEccCCCC---
Confidence            9999999999998 8999999988876 788888888776 999999999988788899999999999999874321   


Q ss_pred             CCCCccChHHHhhcceEEEEeecccc-----cchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceE
Q 026217          160 KPEGVHNLTCLISKRIRMEGFLVPDY-----FHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQ  234 (241)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~  234 (241)
                        ....+...+..+++++.+.....+     +....+.+.++++++.++.+.+.+.+.|+++++.++++.+.+++..||+
T Consensus       243 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kv  320 (323)
T cd05282         243 --PVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTPVGAKFPLEDFEEAVAAAEQPGRGGKV  320 (323)
T ss_pred             --CCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcccCccceecHHHHHHHHHHHhcCCCCceE
Confidence              112333444448899888876543     2344567888999999999988778899999999999999998888899


Q ss_pred             EEE
Q 026217          235 VVE  237 (241)
Q Consensus       235 vv~  237 (241)
                      +++
T Consensus       321 v~~  323 (323)
T cd05282         321 LLT  323 (323)
T ss_pred             eeC
Confidence            863

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=99.97  E-value=3.1e-28  Score=201.97  Aligned_cols=225  Identities=20%  Similarity=0.275  Sum_probs=186.3

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHH--hcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFE--VCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYV   79 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~--~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v   79 (241)
                      |+|+||+.++++.++++ |++++.. +++.++.++.|||+++..  ...+.++++++|+|++|++|++++|+|+++|+++
T Consensus       140 g~~ae~~~v~~~~~~~v-P~~l~~~-~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~v  217 (398)
T TIGR01751       140 GSFAEFALVKDYQLMPK-PKHLTWE-EAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGNP  217 (398)
T ss_pred             ccceEEEEechHHeEEC-CCCCCHH-HHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCeE
Confidence            89999999999999999 9995544 377888999999999865  4678999999999999999999999999999999


Q ss_pred             EEEeCCHHHHHHHHHHcCCCeeecCCCc---------------------hhHHHHHHHHCCC-CccEEEeCCCchhHHHH
Q 026217           80 VGSAGSKDKVDLLKNKFGFDEAFNYKEE---------------------PDLDAALKRYFPE-GINIYFENVGGKMLDAV  137 (241)
Q Consensus        80 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~---------------------~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~  137 (241)
                      +++++++++.+.++ ++|++.++|+++.                     ..+...+.+.+++ ++|++|||+|...+...
T Consensus       218 i~~~~~~~~~~~~~-~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~~~~~  296 (398)
T TIGR01751       218 VAVVSSPEKAEYCR-ELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRATFPTS  296 (398)
T ss_pred             EEEcCCHHHHHHHH-HcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHHHHHH
Confidence            99988999999999 8999988886532                     0244556667765 89999999998888999


Q ss_pred             HHhhccCCEEEEEeeecccCCCCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCCc
Q 026217          138 LLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLES  217 (241)
Q Consensus       138 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~  217 (241)
                      +++++++|+++.+|.....+     ...+...++.++.++.+.....     .+.+..+++++.++.+.+.+.+++++++
T Consensus       297 ~~~l~~~G~~v~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~l~~~~~~~~~l~~  366 (398)
T TIGR01751       297 VFVCRRGGMVVICGGTTGYN-----HDYDNRYLWMRQKRIQGSHFAN-----LREAWEANRLVAKGRIDPTLSKVYPLEE  366 (398)
T ss_pred             HHhhccCCEEEEEccccCCC-----CCcCHHHHhhcccEEEccccCc-----HHHHHHHHHHHHCCCcccceeeEEcHHH
Confidence            99999999999998754321     1233445556777777765543     3446788899999999988889999999


Q ss_pred             HHHHHHHhhcCCCcceEEEEec
Q 026217          218 APAALVGLFSGRNVGKQVVEVA  239 (241)
Q Consensus       218 ~~~a~~~l~~~~~~gk~vv~~~  239 (241)
                      ++++++.+.+++..||+|+++.
T Consensus       367 ~~~a~~~~~~~~~~gkvvv~~~  388 (398)
T TIGR01751       367 IGQAHQDVHRNHHQGNVAVLVL  388 (398)
T ss_pred             HHHHHHHHHcCCCCceEEEEeC
Confidence            9999999999998999999875

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=3.2e-28  Score=198.88  Aligned_cols=219  Identities=25%  Similarity=0.322  Sum_probs=183.0

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVG   81 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~   81 (241)
                      |++++|+.++.+.++++ |++++.. +++++++++.|||+++ ....++++++|+|+|++|++|++++++|+++|++|++
T Consensus       131 g~~~~~~~v~~~~~~~i-p~~~~~~-~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~  207 (350)
T cd08274         131 GGFAEYTVVPAENAYPV-NSPLSDV-ELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIA  207 (350)
T ss_pred             ccceEEEEecHHHceeC-CCCCCHH-HHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEE
Confidence            89999999999999999 9995544 4789999999999998 6678999999999999999999999999999999999


Q ss_pred             EeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCCC
Q 026217           82 SAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDK  160 (241)
Q Consensus        82 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~  160 (241)
                      +++++ +.+.++ ++|++.+++.... ....  ...+.+ ++|++|||+|+..+..++++++++|+++.+|....     
T Consensus       208 ~~~~~-~~~~~~-~~g~~~~~~~~~~-~~~~--~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~-----  277 (350)
T cd08274         208 VAGAA-KEEAVR-ALGADTVILRDAP-LLAD--AKALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAIAG-----  277 (350)
T ss_pred             EeCch-hhHHHH-hcCCeEEEeCCCc-cHHH--HHhhCCCCCcEEEecCCHHHHHHHHHHhccCCEEEEecccCC-----
Confidence            98665 888888 8998766655443 3333  344444 89999999999888999999999999999986421     


Q ss_pred             CCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEEEe
Q 026217          161 PEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  238 (241)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv~~  238 (241)
                      .....+...++.+++++.+.....     .+.+.++++++.++.+++.+..++++++++++++.+.++...||+|+++
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~  350 (350)
T cd08274         278 PVVELDLRTLYLKDLTLFGSTLGT-----REVFRRLVRYIEEGEIRPVVAKTFPLSEIREAQAEFLEKRHVGKLVLVP  350 (350)
T ss_pred             ccccCCHHHhhhcceEEEEeecCC-----HHHHHHHHHHHHCCCcccccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence            112344556678899998887644     6678889999999999888888999999999999999888889999863

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=99.97  E-value=4.2e-28  Score=196.55  Aligned_cols=233  Identities=51%  Similarity=0.841  Sum_probs=190.5

Q ss_pred             CccceEEeecC-CceeeecCCCCCcch-hhhh-cCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCE
Q 026217            2 TGWEEYSLVTA-PRLFKIQHTDMPLSY-YTGI-LGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY   78 (241)
Q Consensus         2 G~~ae~~~v~~-~~~~~i~P~~~~~~~-~~a~-l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~   78 (241)
                      |+|++|+.++. +.++++ |++++.++ ++++ +++++.|||+++.+...+.++++|+|+|++|++|++++|+|++.|++
T Consensus        94 ~~~~~~~~v~~~~~~~~l-P~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~~  172 (329)
T cd05288          94 LGWQEYAVVDGASGLRKL-DPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGAR  172 (329)
T ss_pred             cceEEEEEecchhhcEEC-CcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCCE
Confidence            47999999999 999999 99853122 3444 99999999999988788999999999999999999999999999999


Q ss_pred             EEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCC
Q 026217           79 VVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNN  158 (241)
Q Consensus        79 v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~  158 (241)
                      |+++++++++.+.+++.+|+++++++++. ++..++....++++|+++||+|+..+..++++++++|+++.+|.....+.
T Consensus       173 vi~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~v~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~  251 (329)
T cd05288         173 VVGIAGSDEKCRWLVEELGFDAAINYKTP-DLAEALKEAAPDGIDVYFDNVGGEILDAALTLLNKGGRIALCGAISQYNA  251 (329)
T ss_pred             EEEEeCCHHHHHHHHhhcCCceEEecCCh-hHHHHHHHhccCCceEEEEcchHHHHHHHHHhcCCCceEEEEeeccCccc
Confidence            99999999999999833999989988876 78788887765689999999999889999999999999999986432111


Q ss_pred             CCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEE
Q 026217          159 DKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVV  236 (241)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv  236 (241)
                      .......+....+.+++++.+...........+.+.++++++.+|.+++.....++++++.++++.+.+++..||+++
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv  329 (329)
T cd05288         252 TEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYREDVVEGLENAPEAFLGLFTGKNTGKLVV  329 (329)
T ss_pred             ccccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCccccccccccHHHHHHHHHHHhcCCCccceeC
Confidence            000002334566788888888776543333456788899999999998876677999999999999998888888874

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=99.96  E-value=6.1e-28  Score=195.89  Aligned_cols=231  Identities=23%  Similarity=0.339  Sum_probs=191.2

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVG   81 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~   81 (241)
                      |+|++|+.++.++++++ |++++.. +++.++.++.|||+++.....+.++++|+|+|++|++|++++++|++.|+++++
T Consensus        93 g~~~~~~~v~~~~~~~i-p~~~~~~-~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~  170 (334)
T PTZ00354         93 GGYAEYAVAHKGHVMHI-PQGYTFE-EAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAATII  170 (334)
T ss_pred             CceeeEEEecHHHcEeC-CCCCCHH-HHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEE
Confidence            78999999999999999 9995544 477899999999999988788999999999999999999999999999999888


Q ss_pred             EeCCHHHHHHHHHHcCCCeeecCCCchh-HHHHHHHHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCC
Q 026217           82 SAGSKDKVDLLKNKFGFDEAFNYKEEPD-LDAALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNND  159 (241)
Q Consensus        82 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~-~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~  159 (241)
                      +++++++.+.++ ++|.++++++... + +...+++.+++ ++|+++||+|+..+..++++++++|+++.+|...+.   
T Consensus       171 ~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~g~~i~~~~~~~~---  245 (334)
T PTZ00354        171 TTSSEEKVDFCK-KLAAIILIRYPDE-EGFAPKVKKLTGEKGVNLVLDCVGGSYLSETAEVLAVDGKWIVYGFMGGA---  245 (334)
T ss_pred             EeCCHHHHHHHH-HcCCcEEEecCCh-hHHHHHHHHHhCCCCceEEEECCchHHHHHHHHHhccCCeEEEEecCCCC---
Confidence            898999999998 8999888887765 5 77788887765 899999999988899999999999999999853321   


Q ss_pred             CCCCccChHHHhhcceEEEEeecccc-----cchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceE
Q 026217          160 KPEGVHNLTCLISKRIRMEGFLVPDY-----FHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQ  234 (241)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~  234 (241)
                       .....+...++.++.++.+......     +....+.++.+++++.++.+.+.+...+++++++++++.+.+++..+|+
T Consensus       246 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~kv  324 (334)
T PTZ00354        246 -KVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIKPIVDRTYPLEEVAEAHTFLEQNKNIGKV  324 (334)
T ss_pred             -cccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCCccCccccEEcHHHHHHHHHHHHhCCCCceE
Confidence             1111444455666667777654432     1222355678889999999988877899999999999999988888999


Q ss_pred             EEEecC
Q 026217          235 VVEVAT  240 (241)
Q Consensus       235 vv~~~~  240 (241)
                      ++++.+
T Consensus       325 vv~~~~  330 (334)
T PTZ00354        325 VLTVNE  330 (334)
T ss_pred             EEecCC
Confidence            998753

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=99.96  E-value=4.1e-28  Score=197.59  Aligned_cols=230  Identities=25%  Similarity=0.294  Sum_probs=189.5

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEE
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVV   80 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~   80 (241)
                      .|+|++|+.++.+.++++ |++++.. ++++++++++|||+++.....++++++|+|+|++|++|++++|+|++.|++|+
T Consensus        98 ~g~~~~~~~v~~~~~~~l-p~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~  175 (341)
T cd08290          98 LGTWRTHAVVPADDLIKV-PNDVDPE-QAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIKTI  175 (341)
T ss_pred             CccchheEeccHHHeEeC-CCCCCHH-HHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCCeEE
Confidence            389999999999999999 9995544 47888999999999998778899999999999999999999999999999999


Q ss_pred             EEeCCH----HHHHHHHHHcCCCeeecCCCc--hhHHHHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeeec
Q 026217           81 GSAGSK----DKVDLLKNKFGFDEAFNYKEE--PDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMIS  154 (241)
Q Consensus        81 ~~~~~~----~~~~~~~~~~g~~~~i~~~~~--~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  154 (241)
                      ++++++    ++.+.++ ++|++++++++..  .++...++...++++|+++||+|+......+++++++|+++.+|...
T Consensus       176 ~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~  254 (341)
T cd08290         176 NVVRDRPDLEELKERLK-ALGADHVLTEEELRSLLATELLKSAPGGRPKLALNCVGGKSATELARLLSPGGTMVTYGGMS  254 (341)
T ss_pred             EEEcCCCcchhHHHHHH-hcCCCEEEeCcccccccHHHHHHHHcCCCceEEEECcCcHhHHHHHHHhCCCCEEEEEeccC
Confidence            998776    6788888 8999988877652  03556666665547999999999888888999999999999998643


Q ss_pred             ccCCCCCCCccChHHHhhcceEEEEeecccc-----cchhHHHHHHHHHHHHcCCceeccceee---cCCcHHHHHHHhh
Q 026217          155 QYNNDKPEGVHNLTCLISKRIRMEGFLVPDY-----FHLYPKFLEMMIPRIKEGKIVYVEDKAE---GLESAPAALVGLF  226 (241)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~~~~~---~l~~~~~a~~~l~  226 (241)
                      ..     ....+....+.+++++.+.....+     +......+..+++++.+|.+.+.+...+   ++++++++++.+.
T Consensus       255 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~  329 (341)
T cd08290         255 GQ-----PVTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAPPVEKVTDDPLEEFKDALANAL  329 (341)
T ss_pred             CC-----CcccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCCcccccccCCHHHHHHHHHHHh
Confidence            21     122344456889999999876543     2233457888999999999988776777   9999999999999


Q ss_pred             cCCCcceEEEEe
Q 026217          227 SGRNVGKQVVEV  238 (241)
Q Consensus       227 ~~~~~gk~vv~~  238 (241)
                      +++..||+|+++
T Consensus       330 ~~~~~~k~v~~~  341 (341)
T cd08290         330 KGGGGGKQVLVM  341 (341)
T ss_pred             hcCCCCeEEEeC
Confidence            988889999864

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>cd08230 glucose_DH Glucose dehydrogenase

Probab=99.96  E-value=3.6e-28  Score=198.83  Aligned_cols=215  Identities=19%  Similarity=0.170  Sum_probs=167.3

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHh------cCCCCCcEEEEEcCCchHHHHHHHHHHHc
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEV------CSPKQGEYVFVSAASGAVGQLVGQFAKLV   75 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~------~~~~~~~~vlI~ga~g~~G~~avqla~~~   75 (241)
                      |+|+||++++++.++++ |++  ++ +++++..++.+++.++...      ..+++|++|+|+|+ |++|++++|+|+.+
T Consensus       121 G~~aey~~~~~~~~~~~-P~~--~~-~~a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~-G~vG~~a~q~ak~~  195 (355)
T cd08230         121 GFMREYFVDDPEYLVKV-PPS--LA-DVGVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGA-GPIGLLAALLLRLR  195 (355)
T ss_pred             ccceeEEEeccccEEEC-CCC--CC-cceeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECC-CHHHHHHHHHHHHc
Confidence            88999999999999999 999  44 4677777777766655332      23578999999995 99999999999999


Q ss_pred             CCEEEEEeC---CHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEe
Q 026217           76 GCYVVGSAG---SKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus        76 g~~v~~~~~---~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g  151 (241)
                      |++|+++++   ++++.+.++ ++|++. +++.+. ++.+ .+ . .+++|+||||+|+ ..+..++++++++|+++.+|
T Consensus       196 G~~vi~~~~~~~~~~~~~~~~-~~Ga~~-v~~~~~-~~~~-~~-~-~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G  269 (355)
T cd08230         196 GFEVYVLNRRDPPDPKADIVE-ELGATY-VNSSKT-PVAE-VK-L-VGEFDLIIEATGVPPLAFEALPALAPNGVVILFG  269 (355)
T ss_pred             CCeEEEEecCCCCHHHHHHHH-HcCCEE-ecCCcc-chhh-hh-h-cCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEe
Confidence            999999997   688999998 999986 566654 5543 22 2 2479999999997 57889999999999999999


Q ss_pred             eecccCCCCCCCccC----hHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCC------ceeccceeecCCcHHHH
Q 026217          152 MISQYNNDKPEGVHN----LTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGK------IVYVEDKAEGLESAPAA  221 (241)
Q Consensus       152 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~------~~~~~~~~~~l~~~~~a  221 (241)
                      ...+.    .....+    ...++.+++++.|+....     .+.+..+++++.++.      +++.++++|+++++.+|
T Consensus       270 ~~~~~----~~~~~~~~~~~~~~~~k~~~i~g~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a  340 (355)
T cd08230         270 VPGGG----REFEVDGGELNRDLVLGNKALVGSVNAN-----KRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEA  340 (355)
T ss_pred             cCCCC----CccccChhhhhhhHhhcCcEEEEecCCc-----hhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHH
Confidence            75431    111122    346777999999986544     345677777777665      66778899999999999


Q ss_pred             HHHhhcCCCcceEEEEe
Q 026217          222 LVGLFSGRNVGKQVVEV  238 (241)
Q Consensus       222 ~~~l~~~~~~gk~vv~~  238 (241)
                      ++.+.++.  +|+++++
T Consensus       341 ~~~~~~~~--~K~v~~~  355 (355)
T cd08230         341 LTEKPDGE--IKVVIEW  355 (355)
T ss_pred             HHhcccCC--eEEEeeC
Confidence            99887654  5999875

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.96  E-value=1.3e-27  Score=194.57  Aligned_cols=221  Identities=22%  Similarity=0.282  Sum_probs=187.9

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVG   81 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~   81 (241)
                      |++++|+.++++.++++ |++++.. ++++++..+.|||+++.. .+++++++|+|+|+++++|++++++|+++|++|++
T Consensus       119 g~~~s~~~~~~~~~~~l-p~~~~~~-~~a~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~  195 (341)
T cd08297         119 GTFAEYAIADARYVTPI-PDGLSFE-QAAPLLCAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIA  195 (341)
T ss_pred             CcceeEEEeccccEEEC-CCCCCHH-HHHHHHcchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEE
Confidence            68999999999999999 9995544 377899999999999966 58999999999999888999999999999999999


Q ss_pred             EeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCC-chhHHHHHHhhccCCEEEEEeeecccCCC
Q 026217           82 SAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNND  159 (241)
Q Consensus        82 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~  159 (241)
                      +++++++.+.++ ++|+++++++++. ++.+++.+.+++ ++|+++|+.+ ......++++++++|+++.+|....    
T Consensus       196 ~~~~~~~~~~~~-~~g~~~v~~~~~~-~~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~----  269 (341)
T cd08297         196 IDVGDEKLELAK-ELGADAFVDFKKS-DDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPG----  269 (341)
T ss_pred             EeCCHHHHHHHH-HcCCcEEEcCCCc-cHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCC----
Confidence            999999999997 8999999998887 788888887765 8999999776 5788899999999999999986431    


Q ss_pred             CCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEEEe
Q 026217          160 KPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  238 (241)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv~~  238 (241)
                       .....+...+..+++++.+.....     .+.++.+++++.++.+++.+ ..|++++++++++.+..+...||+++++
T Consensus       270 -~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~  341 (341)
T cd08297         270 -GFIPLDPFDLVLRGITIVGSLVGT-----RQDLQEALEFAARGKVKPHI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF  341 (341)
T ss_pred             -CCCCCCHHHHHhcccEEEEeccCC-----HHHHHHHHHHHHcCCCccee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence             112344455667888888865433     57788899999999998755 6799999999999999998889999874

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=99.96  E-value=1.4e-27  Score=194.45  Aligned_cols=218  Identities=23%  Similarity=0.297  Sum_probs=183.2

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHh-cCCCCCcEEEEEcCCchHHHHHHHHHHHcC-CEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEV-CSPKQGEYVFVSAASGAVGQLVGQFAKLVG-CYV   79 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~-~~~~~~~~vlI~ga~g~~G~~avqla~~~g-~~v   79 (241)
                      |+|++|+.+++++++++ |++++.. ++++++..++|||+++.+. ..+.++++|+|+|+ |++|++++|+|+..| .+|
T Consensus       119 g~~~~~~~v~~~~~~~~-P~~ls~~-~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~-~~vg~~~~~~a~~~g~~~v  195 (340)
T cd05284         119 GGFAEYLLVPSRRLVKL-PRGLDPV-EAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGV-GGLGHIAVQILRALTPATV  195 (340)
T ss_pred             CcceeeEEecHHHeEEC-CCCCCHH-HhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcC-cHHHHHHHHHHHHhCCCcE
Confidence            78999999999999999 9995433 4889999999999999776 46889999999995 779999999999999 799


Q ss_pred             EEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeecccC
Q 026217           80 VGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYN  157 (241)
Q Consensus        80 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~  157 (241)
                      +++++++++.+.++ ++|++++++++.  .+..++++..++ ++|+++||+|+ .....++++++++|+++.+|..+.  
T Consensus       196 ~~~~~~~~~~~~~~-~~g~~~~~~~~~--~~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~--  270 (340)
T cd05284         196 IAVDRSEEALKLAE-RLGADHVLNASD--DVVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH--  270 (340)
T ss_pred             EEEeCCHHHHHHHH-HhCCcEEEcCCc--cHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC--
Confidence            99999999999998 999998988876  367778877766 89999999996 788899999999999999986331  


Q ss_pred             CCCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEEE
Q 026217          158 NDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVE  237 (241)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv~  237 (241)
                           ...+....+.+++++.+.....     .+.+..+++++.+|.+++. ...|+++++++|++.+.+++..||+++.
T Consensus       271 -----~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~g~l~~~-~~~~~~~~~~~a~~~~~~~~~~gkvv~~  339 (340)
T cd05284         271 -----GRLPTSDLVPTEISVIGSLWGT-----RAELVEVVALAESGKVKVE-ITKFPLEDANEALDRLREGRVTGRAVLV  339 (340)
T ss_pred             -----CccCHHHhhhcceEEEEEeccc-----HHHHHHHHHHHHhCCCCcc-eEEEeHHHHHHHHHHHHcCCccceEEec
Confidence                 1223334467888888876543     5678889999999998864 4679999999999999999888999975


Q ss_pred             e
Q 026217          238 V  238 (241)
Q Consensus       238 ~  238 (241)
                      +
T Consensus       340 ~  340 (340)
T cd05284         340 P  340 (340)
T ss_pred             C
Confidence            3

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=99.96  E-value=9.6e-28  Score=194.22  Aligned_cols=227  Identities=24%  Similarity=0.352  Sum_probs=176.2

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhc--C-CCCCcEEEEEcCCchHHHHHHHHHHHcCCE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVC--S-PKQGEYVFVSAASGAVGQLVGQFAKLVGCY   78 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~--~-~~~~~~vlI~ga~g~~G~~avqla~~~g~~   78 (241)
                      |+|+||+.++++.++++ |++++.. +++.+++++.|||+++....  . ..++++|+|+|++|++|++++|+|+++|++
T Consensus        96 g~~~~~~~v~~~~~~~~-p~~~~~~-~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~  173 (326)
T cd08289          96 GGYSEYARVPAEWVVPL-PKGLTLK-EAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGYE  173 (326)
T ss_pred             CcceeEEEEcHHHeEEC-CCCCCHH-HHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCCe
Confidence            89999999999999999 9985544 37889999999999986543  2 345789999999999999999999999999


Q ss_pred             EEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCC
Q 026217           79 VVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNN  158 (241)
Q Consensus        79 v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~  158 (241)
                      |+++++++++.+.++ ++|+++++++++.  ..+.+....++++|+++||+|+..+...+++++++|+++.+|.....  
T Consensus       174 v~~~~~~~~~~~~~~-~~g~~~v~~~~~~--~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~i~~g~~~~~--  248 (326)
T cd08289         174 VVASTGKADAADYLK-KLGAKEVIPREEL--QEESIKPLEKQRWAGAVDPVGGKTLAYLLSTLQYGGSVAVSGLTGGG--  248 (326)
T ss_pred             EEEEecCHHHHHHHH-HcCCCEEEcchhH--HHHHHHhhccCCcCEEEECCcHHHHHHHHHHhhcCCEEEEEeecCCC--
Confidence            999999999999998 8999888887653  34556656544899999999998889999999999999999975321  


Q ss_pred             CCCCCccChHHHhhcceEEEEeecccc-cchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEEE
Q 026217          159 DKPEGVHNLTCLISKRIRMEGFLVPDY-FHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVE  237 (241)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv~  237 (241)
                         ....+...++.+++++.+...... .....+.+..+.+.+..+.+...+.++++++++.+|++.+.+++..||+|++
T Consensus       249 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~  325 (326)
T cd08289         249 ---EVETTVFPFILRGVNLLGIDSVECPMELRRRIWRRLATDLKPTQLLNEIKQEITLDELPEALKQILQGRVTGRTVVK  325 (326)
T ss_pred             ---CCCcchhhhhhccceEEEEEeEecCchHHHHHHHHHHhhcCccccccccceEeeHHHHHHHHHHHhcCcccceEEEe
Confidence               112234456688899988764322 1122334444444433233334567899999999999999999989999986


Q ss_pred             e
Q 026217          238 V  238 (241)
Q Consensus       238 ~  238 (241)
                      +
T Consensus       326 ~  326 (326)
T cd08289         326 L  326 (326)
T ss_pred             C
Confidence            4

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=99.96  E-value=1.4e-27  Score=192.59  Aligned_cols=225  Identities=21%  Similarity=0.282  Sum_probs=183.9

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVG   81 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~   81 (241)
                      |+|++|+.+++..++++ |++++.. ++++++.++.|||+++.+...+.+|++|+|+|++|++|++++|+|++.|++|++
T Consensus        95 g~~~~~~~~~~~~~~~i-p~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~  172 (320)
T cd08243          95 GSYAEYTLVPNEQVYAI-DSDLSWA-ELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGATVTA  172 (320)
T ss_pred             cccceEEEcCHHHcEeC-CCCCCHH-HHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCCEEEE
Confidence            78999999999999999 9985544 478999999999999988888999999999999999999999999999999999


Q ss_pred             EeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCCCC
Q 026217           82 SAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKP  161 (241)
Q Consensus        82 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~  161 (241)
                      +++++++.+.++ ++|++++++. .. ++.+.+++. ++++|+++||+|+..+...+++++++|+++.+|...+.. ...
T Consensus       173 ~~~~~~~~~~~~-~~g~~~~~~~-~~-~~~~~i~~~-~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~-~~~  247 (320)
T cd08243         173 TTRSPERAALLK-ELGADEVVID-DG-AIAEQLRAA-PGGFDKVLELVGTATLKDSLRHLRPGGIVCMTGLLGGQW-TLE  247 (320)
T ss_pred             EeCCHHHHHHHH-hcCCcEEEec-Cc-cHHHHHHHh-CCCceEEEECCChHHHHHHHHHhccCCEEEEEccCCCCc-ccC
Confidence            999999999998 8999887754 44 677778777 458999999999988999999999999999998743210 000


Q ss_pred             CCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEE
Q 026217          162 EGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVV  236 (241)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv  236 (241)
                      .........+.+++.+.++.....   ....+..+++++.++.+++.+...++++++++|++.+.+++..+|+|+
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvvv  319 (320)
T cd08243         248 DFNPMDDIPSGVNLTLTGSSSGDV---PQTPLQELFDFVAAGHLDIPPSKVFTFDEIVEAHAYMESNRAFGKVVV  319 (320)
T ss_pred             CcchhhhhhhccceEEEecchhhh---hHHHHHHHHHHHHCCceecccccEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence            000111122366777777664332   245788899999999998877789999999999999998888889886

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=99.96  E-value=1.4e-27  Score=196.96  Aligned_cols=226  Identities=18%  Similarity=0.237  Sum_probs=172.3

Q ss_pred             CccceEEeecCC--ceeeecCCCCCcc---hhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcC
Q 026217            2 TGWEEYSLVTAP--RLFKIQHTDMPLS---YYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVG   76 (241)
Q Consensus         2 G~~ae~~~v~~~--~~~~i~P~~~~~~---~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g   76 (241)
                      |+|+||+++|+.  .++++ |++++..   ..++++..++.|||+++. ..++++|++|+|.| +|++|++++|+|+.+|
T Consensus       133 G~~aey~~v~~~~~~l~~v-P~~~~~~~~~~~~a~l~~~~~ta~~a~~-~~~~~~g~~VlV~G-~G~iG~~aiqlAk~~G  209 (393)
T TIGR02819       133 GGQSEYVMVPYADFNLLKF-PDRDQALEKIRDLTMLSDIFPTGYHGAV-TAGVGPGSTVYIAG-AGPVGLAAAASAQLLG  209 (393)
T ss_pred             CceEEEEEechhhCceEEC-CCcccccccccceeeeccHHHHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcC
Confidence            899999999974  69999 8874321   135788889999999985 47899999999976 5999999999999999


Q ss_pred             CE-EEEEeCCHHHHHHHHHHcCCCeeecC-CCchhHHHHHHHHCCC-CccEEEeCCCch---------------hHHHHH
Q 026217           77 CY-VVGSAGSKDKVDLLKNKFGFDEAFNY-KEEPDLDAALKRYFPE-GINIYFENVGGK---------------MLDAVL  138 (241)
Q Consensus        77 ~~-v~~~~~~~~~~~~~~~~~g~~~~i~~-~~~~~~~~~i~~~~~~-~~d~v~d~~g~~---------------~~~~~~  138 (241)
                      ++ |+++++++++++.++ ++|++. +++ .+. ++.+.+.+.+++ ++|++|||+|..               .+..++
T Consensus       210 a~~vi~~d~~~~r~~~a~-~~Ga~~-v~~~~~~-~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~  286 (393)
T TIGR02819       210 AAVVIVGDLNPARLAQAR-SFGCET-VDLSKDA-TLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLM  286 (393)
T ss_pred             CceEEEeCCCHHHHHHHH-HcCCeE-EecCCcc-cHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHH
Confidence            96 455567788999999 999975 444 334 677778887776 899999999964               789999


Q ss_pred             HhhccCCEEEEEeeecc-cCCCC------CCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCcee--cc
Q 026217          139 LNMRIQGRITLCGMISQ-YNNDK------PEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVY--VE  209 (241)
Q Consensus       139 ~~l~~~G~~v~~g~~~~-~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~  209 (241)
                      ++++++|+++.+|.... .+...      ....+.....+.+++++.+.....     .+++.++++++.+|++++  .+
T Consensus       287 ~~~~~~G~i~~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~~~~~g~i~~~~~i  361 (393)
T TIGR02819       287 EVTRVGGAIGIPGLYVTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQTPV-----MKYNRNLMQAILHDRVQIAKAV  361 (393)
T ss_pred             HHhhCCCEEEEeeecCCcccccccccccccccccchHHhhccCceEEeccCCh-----hhhHHHHHHHHHcCCCCHHHce
Confidence            99999999999998531 11000      011233344555666666632211     344567899999999875  35


Q ss_pred             c-eeecCCcHHHHHHHhhcCCCcceEEEEec
Q 026217          210 D-KAEGLESAPAALVGLFSGRNVGKQVVEVA  239 (241)
Q Consensus       210 ~-~~~~l~~~~~a~~~l~~~~~~gk~vv~~~  239 (241)
                      + ++|||+++++||+.+.+++. +|+++.++
T Consensus       362 ~~~~~~l~~~~~a~~~~~~~~~-~Kvvi~~~  391 (393)
T TIGR02819       362 NVTVISLDDAPEGYAEFDAGAA-KKFVIDPH  391 (393)
T ss_pred             ecceecHHHHHHHHHHHhhCCc-eEEEEeCC
Confidence            5 68999999999999998754 79999875

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=99.96  E-value=3.1e-27  Score=191.52  Aligned_cols=231  Identities=36%  Similarity=0.621  Sum_probs=189.5

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEE
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVV   80 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~   80 (241)
                      .|+|++|+.++.+.++++ |++  +. ++++++.++.|||+++.+...+.++++++|+|++|++|++++|++++.|++|+
T Consensus        93 ~g~~~s~~~v~~~~~~~i-p~~--~~-~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~  168 (329)
T cd08250          93 FGAFAEYQVVPARHAVPV-PEL--KP-EVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGCHVI  168 (329)
T ss_pred             CcceeEEEEechHHeEEC-CCC--cc-hhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCCeEE
Confidence            378999999999999999 887  44 57889999999999998888899999999999999999999999999999999


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCCC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDK  160 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~  160 (241)
                      ++++++++.+.++ ++|++.+++.+.. ++.+.+....++++|+++|++|+......+++++++|+++.+|.........
T Consensus       169 ~~~~~~~~~~~~~-~~g~~~v~~~~~~-~~~~~~~~~~~~~vd~v~~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~  246 (329)
T cd08250         169 GTCSSDEKAEFLK-SLGCDRPINYKTE-DLGEVLKKEYPKGVDVVYESVGGEMFDTCVDNLALKGRLIVIGFISGYQSGT  246 (329)
T ss_pred             EEeCcHHHHHHHH-HcCCceEEeCCCc-cHHHHHHHhcCCCCeEEEECCcHHHHHHHHHHhccCCeEEEEecccCCcccC
Confidence            9999999999998 8999888887766 6777776665558999999999988899999999999999998754210000


Q ss_pred             C----CCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceec--cceeecCCcHHHHHHHhhcCCCcceE
Q 026217          161 P----EGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYV--EDKAEGLESAPAALVGLFSGRNVGKQ  234 (241)
Q Consensus       161 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~l~~~~~a~~~l~~~~~~gk~  234 (241)
                      .    .........+.+++++.+.....+.....+.+..+++++.++.+++.  +...++++++++|++.+.+++..+|+
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kv  326 (329)
T cd08250         247 GPSPVKGATLPPKLLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLYSGKNIGKV  326 (329)
T ss_pred             cccccccccccHHHhhcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCccccCHHHHHHHHHHHHcCCCCceE
Confidence            0    00111235578889999987654433356778889999999999874  33568999999999999998888899


Q ss_pred             EEE
Q 026217          235 VVE  237 (241)
Q Consensus       235 vv~  237 (241)
                      +++
T Consensus       327 vv~  329 (329)
T cd08250         327 VVE  329 (329)
T ss_pred             EeC
Confidence            874

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=99.96  E-value=9.6e-28  Score=190.13  Aligned_cols=200  Identities=19%  Similarity=0.247  Sum_probs=162.6

Q ss_pred             CccceEEeecCC-ceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCE-E
Q 026217            2 TGWEEYSLVTAP-RLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-V   79 (241)
Q Consensus         2 G~~ae~~~v~~~-~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~-v   79 (241)
                      |+|+||+++|++ .++++ |++++.. +++.+++++.|||+++.+ ....++++|+|+|+ |++|++++|+|+.+|++ |
T Consensus        73 G~~aey~~v~~~~~~~~l-P~~~~~~-~aa~l~~~~~ta~~al~~-~~~~~g~~VlV~G~-G~vG~~~~~~ak~~G~~~V  148 (280)
T TIGR03366        73 GGYAEHCHLPAGTAIVPV-PDDLPDA-VAAPAGCATATVMAALEA-AGDLKGRRVLVVGA-GMLGLTAAAAAAAAGAARV  148 (280)
T ss_pred             ccceeeEEecCCCcEEEC-CCCCCHH-HhhHhhhHHHHHHHHHHh-ccCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEE
Confidence            899999999998 69999 9995544 377888899999999955 56679999999986 99999999999999995 9


Q ss_pred             EEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeecccC
Q 026217           80 VGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYN  157 (241)
Q Consensus        80 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~  157 (241)
                      ++++++++++++++ ++|++.++++++   ..+.+++.+++ ++|++||++|+ ..+..++++++++|+++.+|...+  
T Consensus       149 i~~~~~~~r~~~a~-~~Ga~~~i~~~~---~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~--  222 (280)
T TIGR03366       149 VAADPSPDRRELAL-SFGATALAEPEV---LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFP--  222 (280)
T ss_pred             EEECCCHHHHHHHH-HcCCcEecCchh---hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCC--
Confidence            99988999999999 999998887643   34556666665 89999999986 578899999999999999996421  


Q ss_pred             CCCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcC--Cce--eccceeecCCcH
Q 026217          158 NDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEG--KIV--YVEDKAEGLESA  218 (241)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~--~~~~~~~~l~~~  218 (241)
                        ....+.+...++.+++++.|+....     .+.+.++++++.++  .+.  +.++++|||+++
T Consensus       223 --~~~~~i~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~  280 (280)
T TIGR03366       223 --GGPVALDPEQVVRRWLTIRGVHNYE-----PRHLDQAVRFLAANGQRFPFEELVGKPFPLADV  280 (280)
T ss_pred             --CCceeeCHHHHHhCCcEEEecCCCC-----HHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence              1112456678888999999987644     56788899999874  433  567888999874

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=99.96  E-value=2.1e-27  Score=195.21  Aligned_cols=223  Identities=24%  Similarity=0.314  Sum_probs=187.3

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCE-EE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-VV   80 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~-v~   80 (241)
                      |+|++|+.++...++++ |++++.. ++++++.+++|||+++.....+.++++|+|+| +|++|++++++|+..|++ |+
T Consensus       140 g~~~~~~~~~~~~~~~~-P~~is~~-~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g-~g~vG~~~~~lak~~G~~~vi  216 (367)
T cd08263         140 GGLAEYAVVPATALAPL-PESLDYT-ESAVLGCAGFTAYGALKHAADVRPGETVAVIG-VGGVGSSAIQLAKAFGASPII  216 (367)
T ss_pred             CcceeEEEechhhEEEC-CCCCCHH-HHhHhcchHHHHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEE
Confidence            78999999999999999 9996555 48899999999999998888889999999996 699999999999999997 99


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCch-hHHHHHHhhccCCEEEEEeeecccCC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGGK-MLDAVLLNMRIQGRITLCGMISQYNN  158 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~  158 (241)
                      +++.++++.+.++ ++|++.++++++. ++...++...++ ++|+++|++++. ....++++++++|+++.+|.....  
T Consensus       217 ~~~~s~~~~~~~~-~~g~~~v~~~~~~-~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~--  292 (367)
T cd08263         217 AVDVRDEKLAKAK-ELGATHTVNAAKE-DAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGG--  292 (367)
T ss_pred             EEeCCHHHHHHHH-HhCCceEecCCcc-cHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCC--
Confidence            9988999999998 8999999998877 788888877665 899999999986 889999999999999999864311  


Q ss_pred             CCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceec--cceeecCCcHHHHHHHhhcCCCcceEEE
Q 026217          159 DKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYV--EDKAEGLESAPAALVGLFSGRNVGKQVV  236 (241)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~l~~~~~a~~~l~~~~~~gk~vv  236 (241)
                        .....+...++.+++++.++....    ..+.+..+++++.++.+++.  +...++++++.++++.+++++..||+||
T Consensus       293 --~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~  366 (367)
T cd08263         293 --ATAEIPITRLVRRGIKIIGSYGAR----PRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIV  366 (367)
T ss_pred             --CccccCHHHHhhCCeEEEecCCCC----cHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeee
Confidence              112234444557888887753222    14678889999999999874  5678999999999999999988899987


Q ss_pred             E
Q 026217          237 E  237 (241)
Q Consensus       237 ~  237 (241)
                      +
T Consensus       367 ~  367 (367)
T cd08263         367 E  367 (367)
T ss_pred             C
Confidence            4

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=99.96  E-value=2.4e-27  Score=192.68  Aligned_cols=222  Identities=18%  Similarity=0.242  Sum_probs=179.2

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCC-----CcEEEEEcCCchHHHHHHHHHHHc-
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQ-----GEYVFVSAASGAVGQLVGQFAKLV-   75 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~-----~~~vlI~ga~g~~G~~avqla~~~-   75 (241)
                      |+|++|+.++++.++++ |++++.. +++.++++++|||+++....++.+     |++|+|+|++|++|++++|+|+++ 
T Consensus        96 g~~~~~~~v~~~~~~~i-p~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~  173 (336)
T TIGR02817        96 GSNAEFHLVDERIVGHK-PKSLSFA-EAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLT  173 (336)
T ss_pred             CcccceEEEcHHHcccC-CCCCCHH-HHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhC
Confidence            78999999999999999 9995544 488999999999999988888877     999999999999999999999998 


Q ss_pred             CCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCC-chhHHHHHHhhccCCEEEEEeeec
Q 026217           76 GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG-GKMLDAVLLNMRIQGRITLCGMIS  154 (241)
Q Consensus        76 g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~  154 (241)
                      |++|+++++++++.+.++ ++|+++++++..  ++..++++..++++|+++|+++ +......+++++++|+++.++...
T Consensus       174 G~~vi~~~~~~~~~~~l~-~~g~~~~~~~~~--~~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~G~~v~~~~~~  250 (336)
T TIGR02817       174 GLTVIATASRPESQEWVL-ELGAHHVIDHSK--PLKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQGRFALIDDPA  250 (336)
T ss_pred             CCEEEEEcCcHHHHHHHH-HcCCCEEEECCC--CHHHHHHHhcCCCCCEEEEcCCcHHHHHHHHHHhccCCEEEEEcccc
Confidence            999999999999999998 899999988654  6777777754448999999986 478889999999999999874311


Q ss_pred             ccCCCCCCCccChHHHhhcceEEEEeecc--c-c--cchh--HHHHHHHHHHHHcCCceeccceeec---CCcHHHHHHH
Q 026217          155 QYNNDKPEGVHNLTCLISKRIRMEGFLVP--D-Y--FHLY--PKFLEMMIPRIKEGKIVYVEDKAEG---LESAPAALVG  224 (241)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~--~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~---l~~~~~a~~~  224 (241)
                               ..+...+..+++++.+....  . +  +...  .+.+.++++++.+|.+++.+.+.++   ++++++|++.
T Consensus       251 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~a~~~  321 (336)
T TIGR02817       251 ---------ELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTTLAETFGTINAANLKRAHAL  321 (336)
T ss_pred             ---------cccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHHHCCCeeccchhccCCCCHHHHHHHHHH
Confidence                     12233344455666654332  1 1  1111  2568889999999999887666664   6899999999


Q ss_pred             hhcCCCcceEEEE
Q 026217          225 LFSGRNVGKQVVE  237 (241)
Q Consensus       225 l~~~~~~gk~vv~  237 (241)
                      +.+++..||++++
T Consensus       322 ~~~~~~~gkvvv~  334 (336)
T TIGR02817       322 IESGKARGKIVLE  334 (336)
T ss_pred             HHcCCccceEEEe
Confidence            9999888999875

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=99.96  E-value=2.9e-27  Score=191.23  Aligned_cols=226  Identities=22%  Similarity=0.330  Sum_probs=179.0

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcC--CC-CCcEEEEEcCCchHHHHHHHHHHHcCCE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCS--PK-QGEYVFVSAASGAVGQLVGQFAKLVGCY   78 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~--~~-~~~~vlI~ga~g~~G~~avqla~~~g~~   78 (241)
                      |+|++|+.++++.++++ |++++.. +++.+++.+.|||+++.....  +. .+++|+|+|++|++|++++|+|+.+|++
T Consensus        96 g~~~~~~~v~~~~~~~l-p~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~  173 (325)
T cd05280          96 GGFAEYVRVPADWVVPL-PEGLSLR-EAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGYT  173 (325)
T ss_pred             ceeEEEEEEchhhEEEC-CCCCCHH-HHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCCE
Confidence            78999999999999999 9985544 488999999999999866543  35 4579999999999999999999999999


Q ss_pred             EEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCC
Q 026217           79 VVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNN  158 (241)
Q Consensus        79 v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~  158 (241)
                      |+++++++++.+.++ ++|+++++++++. . ....+...++++|+++||+|+..+...+++++++|+++.+|.....  
T Consensus       174 v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~-~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~--  248 (325)
T cd05280         174 VVALTGKEEQADYLK-SLGASEVLDREDL-L-DESKKPLLKARWAGAIDTVGGDVLANLLKQTKYGGVVASCGNAAGP--  248 (325)
T ss_pred             EEEEeCCHHHHHHHH-hcCCcEEEcchhH-H-HHHHHHhcCCCccEEEECCchHHHHHHHHhhcCCCEEEEEecCCCC--
Confidence            999999999999998 8999888876542 2 2223333334799999999998999999999999999999875321  


Q ss_pred             CCCCCccChHHHhhcceEEEEeeccccc-chhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEEE
Q 026217          159 DKPEGVHNLTCLISKRIRMEGFLVPDYF-HLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVE  237 (241)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv~  237 (241)
                        + ...+...++.+++++.+....... ....+.++.+.+++..+. .+.+..+|++++++++++.+.+++..||+|++
T Consensus       249 --~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  324 (325)
T cd05280         249 --E-LTTTVLPFILRGVSLLGIDSVNCPMELRKQVWQKLATEWKPDL-LEIVVREISLEELPEAIDRLLAGKHRGRTVVK  324 (325)
T ss_pred             --c-cccccchheeeeeEEEEEEeecCchhHHHHHHHHHHHHHhcCC-ccceeeEecHHHHHHHHHHHhcCCcceEEEEe
Confidence              1 123334455788898887765432 233456677777777774 44577899999999999999999989999986


Q ss_pred             e
Q 026217          238 V  238 (241)
Q Consensus       238 ~  238 (241)
                      +
T Consensus       325 ~  325 (325)
T cd05280         325 I  325 (325)
T ss_pred             C
Confidence            3

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=99.96  E-value=4.1e-27  Score=190.29  Aligned_cols=225  Identities=24%  Similarity=0.344  Sum_probs=180.7

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHh--cCCCCCc-EEEEEcCCchHHHHHHHHHHHcCCE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEV--CSPKQGE-YVFVSAASGAVGQLVGQFAKLVGCY   78 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~--~~~~~~~-~vlI~ga~g~~G~~avqla~~~g~~   78 (241)
                      |++++|+.++.+.++++ |++++.. +++.++..+++|+.++...  ..+.+++ +|+|+|++|++|++++|+|+++|++
T Consensus        95 g~~~~~~~~~~~~~~~i-P~~~~~~-~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~~  172 (323)
T TIGR02823        95 GGYSQYARVPADWLVPL-PEGLSLR-EAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGYE  172 (323)
T ss_pred             ccceEEEEEchhheEEC-CCCCCHH-HhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCCe
Confidence            78999999999999999 9985444 3788899999999887544  3488998 9999999999999999999999999


Q ss_pred             EEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCC
Q 026217           79 VVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNN  158 (241)
Q Consensus        79 v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~  158 (241)
                      ++++++++++.+.++ ++|++++++.++. +.  .++...++++|.++||+|+..+...+++++++|+++.+|.....  
T Consensus       173 vi~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~--~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~--  246 (323)
T TIGR02823       173 VVASTGKAEEEDYLK-ELGASEVIDREDL-SP--PGKPLEKERWAGAVDTVGGHTLANVLAQLKYGGAVAACGLAGGP--  246 (323)
T ss_pred             EEEEeCCHHHHHHHH-hcCCcEEEccccH-HH--HHHHhcCCCceEEEECccHHHHHHHHHHhCCCCEEEEEcccCCC--
Confidence            999988889899998 8999888877653 32  44455544699999999988889999999999999999875321  


Q ss_pred             CCCCCccChHHHhhcceEEEEeecccc-cchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEEE
Q 026217          159 DKPEGVHNLTCLISKRIRMEGFLVPDY-FHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVE  237 (241)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv~  237 (241)
                         ....+...++.+++++.+...... .....+.+..+.+++..+.+++. ...++++++++|++.+.+++..||+|++
T Consensus       247 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~a~~~~~~~~~~~k~vv~  322 (323)
T TIGR02823       247 ---DLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDLKPRNLESI-TREITLEELPEALEQILAGQHRGRTVVD  322 (323)
T ss_pred             ---CccccHHHHhhcceEEEEEeccccCchhHHHHHHHHHHHhhcCCCcCc-eeeecHHHHHHHHHHHhCCCccceEEEe
Confidence               112233455688999988765432 23334567778888888888765 4589999999999999999989999986


Q ss_pred             e
Q 026217          238 V  238 (241)
Q Consensus       238 ~  238 (241)
                      +
T Consensus       323 ~  323 (323)
T TIGR02823       323 V  323 (323)
T ss_pred             C
Confidence            3

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=99.96  E-value=5e-27  Score=190.16  Aligned_cols=228  Identities=21%  Similarity=0.209  Sum_probs=182.4

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEE
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVV   80 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~   80 (241)
                      +|+|++|+.++.+.++++ |++++.. +++.++..+++||+++.....+.+|++++|+|++|.+|++++|+|+.+|++|+
T Consensus        92 ~g~~~~~v~v~~~~~~~l-p~~~~~~-~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~~v~  169 (327)
T PRK10754         92 LGAYSSVHNVPADKAAIL-PDAISFE-QAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLI  169 (327)
T ss_pred             CcceeeEEEcCHHHceeC-CCCCCHH-HHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCCEEE
Confidence            378999999999999999 9985544 37778889999999998878899999999999999999999999999999999


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNND  159 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~  159 (241)
                      ++++++++.+.++ ++|++++++.+.. ++.+.++..+++ ++|+++||+|+......+++++++|+++.+|.....   
T Consensus       170 ~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~---  244 (327)
T PRK10754        170 GTVGSAQKAQRAK-KAGAWQVINYREE-NIVERVKEITGGKKVRVVYDSVGKDTWEASLDCLQRRGLMVSFGNASGP---  244 (327)
T ss_pred             EEeCCHHHHHHHH-HCCCCEEEcCCCC-cHHHHHHHHcCCCCeEEEEECCcHHHHHHHHHHhccCCEEEEEccCCCC---
Confidence            9999999999998 8999888888776 788888888876 899999999988888999999999999999874311   


Q ss_pred             CCCCccChHHHhhcceEE-EEeec---ccccchhHHHHHHHHHHHHcCCceec--cceeecCCcHHHHHHHhhcCCCcce
Q 026217          160 KPEGVHNLTCLISKRIRM-EGFLV---PDYFHLYPKFLEMMIPRIKEGKIVYV--EDKAEGLESAPAALVGLFSGRNVGK  233 (241)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~l~~~~~a~~~l~~~~~~gk  233 (241)
                        ....+...+..++..+ .....   ...++...+.+..+++++.+|.+++.  +.+.|+++++.++++.+++++..+|
T Consensus       245 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~  322 (327)
T PRK10754        245 --VTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDVAEQQKFPLKDAQRAHEILESRATQGS  322 (327)
T ss_pred             --CCCcCHHHHhccCceEEecceeecccCCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHHHHHHHHHHHcCCCcce
Confidence              1111222222222111 11111   11122344567788999999999864  4688999999999999999998999


Q ss_pred             EEEE
Q 026217          234 QVVE  237 (241)
Q Consensus       234 ~vv~  237 (241)
                      +|+.
T Consensus       323 ~~~~  326 (327)
T PRK10754        323 SLLI  326 (327)
T ss_pred             EEEe
Confidence            9986

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=99.96  E-value=7.2e-27  Score=190.57  Aligned_cols=223  Identities=22%  Similarity=0.299  Sum_probs=186.6

Q ss_pred             CccceEEeecCC--ceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEE
Q 026217            2 TGWEEYSLVTAP--RLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYV   79 (241)
Q Consensus         2 G~~ae~~~v~~~--~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v   79 (241)
                      |+|++|+++++.  .++++ |++++.. +++.++.+++|||+++...+++.++++|+|+| +|++|++++|+|+..|++|
T Consensus       116 g~~~~~~~v~~~~~~~~~i-P~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g-~g~vg~~~~~~a~~~G~~v  192 (345)
T cd08260         116 GSFAEYVAVPRADVNLVRL-PDDVDFV-TAAGLGCRFATAFRALVHQARVKPGEWVAVHG-CGGVGLSAVMIASALGARV  192 (345)
T ss_pred             CcceeEEEcccccCceEEC-CCCCCHH-HhhhhccchHHHHHHHHHccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeE
Confidence            789999999984  89999 9995544 37888899999999998788899999999999 6999999999999999999


Q ss_pred             EEEeCCHHHHHHHHHHcCCCeeecCCC-chhHHHHHHHHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeecccC
Q 026217           80 VGSAGSKDKVDLLKNKFGFDEAFNYKE-EPDLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYN  157 (241)
Q Consensus        80 ~~~~~~~~~~~~~~~~~g~~~~i~~~~-~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~  157 (241)
                      +++++++++.+.++ ++|++++++++. . ++...+....++++|++|||+|+ ......+++++++|+++.+|......
T Consensus       193 i~~~~~~~~~~~~~-~~g~~~~i~~~~~~-~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~  270 (345)
T cd08260         193 IAVDIDDDKLELAR-ELGAVATVNASEVE-DVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEE  270 (345)
T ss_pred             EEEeCCHHHHHHHH-HhCCCEEEccccch-hHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCC
Confidence            99999999999998 899999998887 5 77777877765589999999984 68889999999999999998743211


Q ss_pred             CCCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceec--cceeecCCcHHHHHHHhhcCCCcceEE
Q 026217          158 NDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYV--EDKAEGLESAPAALVGLFSGRNVGKQV  235 (241)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~l~~~~~a~~~l~~~~~~gk~v  235 (241)
                      .   ....+...++.+++++.+.....     .+.++.+++++.++.+.+.  +...+++++++++++.+++++..||+|
T Consensus       271 ~---~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v  342 (345)
T cd08260         271 A---GVALPMDRVVARELEIVGSHGMP-----AHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITV  342 (345)
T ss_pred             C---ccccCHHHHhhcccEEEeCCcCC-----HHHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEE
Confidence            0   01233445557888888876533     5678889999999998764  568899999999999999999899988


Q ss_pred             EE
Q 026217          236 VE  237 (241)
Q Consensus       236 v~  237 (241)
                      ++
T Consensus       343 ~~  344 (345)
T cd08260         343 IT  344 (345)
T ss_pred             ec
Confidence            74

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=99.96  E-value=6.1e-27  Score=192.23  Aligned_cols=224  Identities=23%  Similarity=0.362  Sum_probs=185.0

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVV   80 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~   80 (241)
                      |+|++|+.++++.++++ |++++.. +++.++++++||+.++.....++++++|+|+| +|++|++++|+|++.|+ +|+
T Consensus       139 g~~~~y~~v~~~~~~~i-P~~~s~~-~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g-~g~vG~~~~~la~~~G~~~v~  215 (365)
T cd08278         139 SSFATYAVVHERNVVKV-DKDVPLE-LLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFG-AGAVGLAAVMAAKIAGCTTII  215 (365)
T ss_pred             cceeeEEEecchhEEEC-CCCCCHH-HhhhhcchhhhhhHHHhhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEE
Confidence            78999999999999999 9995544 37899999999999998888899999999997 59999999999999999 699


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeecccCCC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNND  159 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~  159 (241)
                      ++++++++.+.++ ++|++.++++++. ++.+.+.+.+++++|+++||+|+ ..+..++++++++|+++.+|....    
T Consensus       216 ~~~~~~~k~~~~~-~~g~~~~i~~~~~-~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~----  289 (365)
T cd08278         216 AVDIVDSRLELAK-ELGATHVINPKEE-DLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPP----  289 (365)
T ss_pred             EEeCCHHHHHHHH-HcCCcEEecCCCc-CHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCC----
Confidence            9988999999888 8999999998876 78888887774499999999985 678999999999999999987431    


Q ss_pred             CCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCcee-ccceeecCCcHHHHHHHhhcCCCcceEEEE
Q 026217          160 KPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVY-VEDKAEGLESAPAALVGLFSGRNVGKQVVE  237 (241)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~l~~~~~a~~~l~~~~~~gk~vv~  237 (241)
                      ......+...++.+++++.++.....  ...+.+.++++++.+|.+.+ .+...++++++++|++.+.+++.. |++++
T Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~g~l~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~  365 (365)
T cd08278         290 GAEVTLDVNDLLVSGKTIRGVIEGDS--VPQEFIPRLIELYRQGKFPFDKLVTFYPFEDINQAIADSESGKVI-KPVLR  365 (365)
T ss_pred             CCccccCHHHHhhcCceEEEeecCCc--ChHHHHHHHHHHHHcCCCChHHheEEecHHHHHHHHHHHHCCCce-EEEEC
Confidence            11123455556688899888765332  12567788999999999865 345689999999999999887754 88764

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=99.96  E-value=8.7e-27  Score=187.56  Aligned_cols=229  Identities=26%  Similarity=0.350  Sum_probs=191.1

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEE
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVV   80 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~   80 (241)
                      .|++++|+.++.+.++++ |++++.. ++++++..+++|++++.+...+.+|++|+|+|++|++|++++++++.+|++|+
T Consensus        88 ~g~~~~~~~~~~~~~~~~-p~~~~~~-~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~  165 (320)
T cd05286          88 PGAYAEYRVVPASRLVKL-PDGISDE-TAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGATVI  165 (320)
T ss_pred             CCceeEEEEecHHHceeC-CCCCCHH-HHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEE
Confidence            378999999999999999 9885544 37788999999999998888899999999999999999999999999999999


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNND  159 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~  159 (241)
                      ++++++++.+.++ ++|++++++.... ++.+.+...+.+ ++|.++||+++.....++++++++|+++.+|....    
T Consensus       166 ~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~----  239 (320)
T cd05286         166 GTVSSEEKAELAR-AAGADHVINYRDE-DFVERVREITGGRGVDVVYDGVGKDTFEGSLDSLRPRGTLVSFGNASG----  239 (320)
T ss_pred             EEcCCHHHHHHHH-HCCCCEEEeCCch-hHHHHHHHHcCCCCeeEEEECCCcHhHHHHHHhhccCcEEEEEecCCC----
Confidence            9999999999998 8999888887776 787888887766 89999999998888899999999999999987432    


Q ss_pred             CCCCccChHHHhhcceEEEEeecccc---cchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEE
Q 026217          160 KPEGVHNLTCLISKRIRMEGFLVPDY---FHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVV  236 (241)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv  236 (241)
                       .....+...+..+++++.+.....+   +....+.+..+.+++.++.+++.+...|++++++++++.+.++...+|+++
T Consensus       240 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~  318 (320)
T cd05286         240 -PVPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLKVEIGKRYPLADAAQAHRDLESRKTTGKLLL  318 (320)
T ss_pred             -CCCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCcCcccceEcHHHHHHHHHHHHcCCCCceEEE
Confidence             1112233334478888876554332   344456778889999999998877788999999999999999888899998


Q ss_pred             Ee
Q 026217          237 EV  238 (241)
Q Consensus       237 ~~  238 (241)
                      ++
T Consensus       319 ~~  320 (320)
T cd05286         319 IP  320 (320)
T ss_pred             eC
Confidence            63

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=99.96  E-value=6.3e-27  Score=191.28  Aligned_cols=220  Identities=20%  Similarity=0.268  Sum_probs=184.7

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVV   80 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~   80 (241)
                      |++++|+.++.+.++++ |++++.. +++++++.++|||+++.....+.++++|+|+| +|++|++++|+|+..|+ +|+
T Consensus       128 g~~~~~~~~~~~~~~~~-p~~~s~~-~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g-~g~vg~~~~~~a~~~G~~~v~  204 (350)
T cd08240         128 GGYAEYVIVPHSRYLVD-PGGLDPA-LAATLACSGLTAYSAVKKLMPLVADEPVVIIG-AGGLGLMALALLKALGPANII  204 (350)
T ss_pred             CcceeeEEecHHHeeeC-CCCCCHH-HeehhhchhhhHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEE
Confidence            78999999999999999 9995555 47788999999999998776677899999996 69999999999999999 799


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeecccCCC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNND  159 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~  159 (241)
                      ++++++++.+.++ ++|++.++++++. ++.+.+....++++|+++|++|. ..+..++++|+++|+++.+|.....   
T Consensus       205 ~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~---  279 (350)
T cd08240         205 VVDIDEAKLEAAK-AAGADVVVNGSDP-DAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGE---  279 (350)
T ss_pred             EEeCCHHHHHHHH-HhCCcEEecCCCc-cHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCC---
Confidence            9998999999998 8999888888776 67777777665589999999984 7889999999999999999864321   


Q ss_pred             CCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEEE
Q 026217          160 KPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVE  237 (241)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv~  237 (241)
                         ...+......+++++.+.....     .+.+..+++++++|.+++.+...+++++++++++.+.+++..||+++.
T Consensus       280 ---~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~ll~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  349 (350)
T cd08240         280 ---ATLPLPLLPLRALTIQGSYVGS-----LEELRELVALAKAGKLKPIPLTERPLSDVNDALDDLKAGKVVGRAVLK  349 (350)
T ss_pred             ---CcccHHHHhhcCcEEEEcccCC-----HHHHHHHHHHHHcCCCccceeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence               1122233445788888776654     467888999999999988777899999999999999998888999875

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=99.96  E-value=1.6e-27  Score=191.30  Aligned_cols=205  Identities=15%  Similarity=0.180  Sum_probs=159.4

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCE-E
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-V   79 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~-v   79 (241)
                      .|+|+||+++|++.++++ |+++  +++++. ..++.|||+++.+ . ..++++++|+| +|++|++++|+|+.+|++ |
T Consensus       100 ~G~~aey~~v~~~~~~~i-p~~~--~~~~a~-~~~~~~a~~~~~~-~-~~~~~~vlV~G-~G~vG~~a~q~ak~~G~~~v  172 (308)
T TIGR01202       100 FGGASKRLVTPASRVCRL-DPAL--GPQGAL-LALAATARHAVAG-A-EVKVLPDLIVG-HGTLGRLLARLTKAAGGSPP  172 (308)
T ss_pred             CCcccceEEcCHHHceeC-CCCC--CHHHHh-hhHHHHHHHHHHh-c-ccCCCcEEEEC-CCHHHHHHHHHHHHcCCceE
Confidence            389999999999999999 9884  433443 4567899999955 3 34688999998 599999999999999996 5


Q ss_pred             EEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeecccCC
Q 026217           80 VGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNN  158 (241)
Q Consensus        80 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~  158 (241)
                      +++..++++++.+. .+   .++|+.+  .        .+.++|++|||+|+ ..+..++++++++|+++.+|....   
T Consensus       173 ~~~~~~~~rl~~a~-~~---~~i~~~~--~--------~~~g~Dvvid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~---  235 (308)
T TIGR01202       173 AVWETNPRRRDGAT-GY---EVLDPEK--D--------PRRDYRAIYDASGDPSLIDTLVRRLAKGGEIVLAGFYTE---  235 (308)
T ss_pred             EEeCCCHHHHHhhh-hc---cccChhh--c--------cCCCCCEEEECCCCHHHHHHHHHhhhcCcEEEEEeecCC---
Confidence            56666666666555 33   4455422  1        12379999999997 468999999999999999997431   


Q ss_pred             CCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCcee--ccceeecCCcHHHHHHHhhcCCCcceEEE
Q 026217          159 DKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQVV  236 (241)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~l~~~~~~gk~vv  236 (241)
                         ....+...++.+++++.++..+.     .+.++.+++++.+|.+++  .++++|||+++++|++.+.++...+|+++
T Consensus       236 ---~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~l~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~~Kv~~  307 (308)
T TIGR01202       236 ---PVNFDFVPAFMKEARLRIAAEWQ-----PGDLHAVRELIESGALSLDGLITHQRPASDAAEAYMTAFSDPDCLKMIL  307 (308)
T ss_pred             ---CcccccchhhhcceEEEEecccc-----hhHHHHHHHHHHcCCCChhhccceeecHHHHHHHHHHHhcCcCceEEEe
Confidence               12344456777888888876544     567899999999999976  57899999999999999887766789987


Q ss_pred             E
Q 026217          237 E  237 (241)
Q Consensus       237 ~  237 (241)
                      +
T Consensus       308 ~  308 (308)
T TIGR01202       308 D  308 (308)
T ss_pred             C
Confidence            4

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=99.96  E-value=1.2e-26  Score=188.76  Aligned_cols=219  Identities=24%  Similarity=0.316  Sum_probs=180.7

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHc-CCEEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVV   80 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~-g~~v~   80 (241)
                      |+++||+.++...++++ |++++.. ++++++.+++|||+++ ..+.++++++|+|+| +|++|++++|+|++. |++|+
T Consensus       116 g~~~~~~~v~~~~~~~~-p~~~~~~-~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g-~g~vG~~~~~la~~~~g~~v~  191 (338)
T PRK09422        116 GGMAEQCIVTADYAVKV-PEGLDPA-QASSITCAGVTTYKAI-KVSGIKPGQWIAIYG-AGGLGNLALQYAKNVFNAKVI  191 (338)
T ss_pred             CcceeEEEEchHHeEeC-CCCCCHH-HeehhhcchhHHHHHH-HhcCCCCCCEEEEEC-CcHHHHHHHHHHHHhCCCeEE
Confidence            78999999999999999 9995544 4789999999999998 678899999999999 599999999999984 99999


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCC-chhHHHHHHHHCCCCccE-EEeCCCchhHHHHHHhhccCCEEEEEeeecccCC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKE-EPDLDAALKRYFPEGINI-YFENVGGKMLDAVLLNMRIQGRITLCGMISQYNN  158 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~-~~~~~~~i~~~~~~~~d~-v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~  158 (241)
                      ++++++++++.++ ++|++.+++++. . ++.+.+++..+ ++|. ++++.++..+..++++++++|+++.+|....   
T Consensus       192 ~~~~~~~~~~~~~-~~g~~~v~~~~~~~-~~~~~v~~~~~-~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~---  265 (338)
T PRK09422        192 AVDINDDKLALAK-EVGADLTINSKRVE-DVAKIIQEKTG-GAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPE---  265 (338)
T ss_pred             EEeCChHHHHHHH-HcCCcEEecccccc-cHHHHHHHhcC-CCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCC---
Confidence            9999999999998 999998888864 4 66777777765 6884 5555556788999999999999999986421   


Q ss_pred             CCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEEEe
Q 026217          159 DKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  238 (241)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv~~  238 (241)
                         ....+......+..++.+.....     .+.++.+++++.+|.+.+.+. .+++++++++++.+.++...||+++.+
T Consensus       266 ---~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~g~l~~~v~-~~~~~~~~~a~~~~~~~~~~gkvvv~~  336 (338)
T PRK09422        266 ---SMDLSIPRLVLDGIEVVGSLVGT-----RQDLEEAFQFGAEGKVVPKVQ-LRPLEDINDIFDEMEQGKIQGRMVIDF  336 (338)
T ss_pred             ---CceecHHHHhhcCcEEEEecCCC-----HHHHHHHHHHHHhCCCCccEE-EEcHHHHHHHHHHHHcCCccceEEEec
Confidence               11234445566777777655433     567888999999999877654 689999999999999998899999976


Q ss_pred             c
Q 026217          239 A  239 (241)
Q Consensus       239 ~  239 (241)
                      .
T Consensus       337 ~  337 (338)
T PRK09422        337 T  337 (338)
T ss_pred             C
Confidence            4

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=99.96  E-value=9.4e-27  Score=190.01  Aligned_cols=221  Identities=23%  Similarity=0.240  Sum_probs=181.3

Q ss_pred             CccceEEeecCC--ceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-E
Q 026217            2 TGWEEYSLVTAP--RLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-Y   78 (241)
Q Consensus         2 G~~ae~~~v~~~--~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~   78 (241)
                      |+|++|++++..  .++++ |++++.. +++.++.+++|||+++ ...+++++++|+|.| +|++|++++|+|+++|+ +
T Consensus       119 g~~~~~~~v~~~~~~~~~l-P~~~~~~-~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g-~g~vg~~~iqlak~~g~~~  194 (347)
T cd05278         119 GGQAEYVRVPYADMNLAKI-PDGLPDE-DALMLSDILPTGFHGA-ELAGIKPGSTVAVIG-AGPVGLCAVAGARLLGAAR  194 (347)
T ss_pred             CeeeEEEEecchhCeEEEC-CCCCCHH-HHhhhcchhhheeehh-hhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCE
Confidence            789999999987  89999 9995444 3788999999999998 667899999999976 59999999999999997 8


Q ss_pred             EEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeeccc
Q 026217           79 VVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQY  156 (241)
Q Consensus        79 v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~  156 (241)
                      |+++.+++++.+.++ ++|++.++++++. ++.+.++..+++ ++|++||++|+ ..+..++++++++|+++.+|.....
T Consensus       195 v~~~~~~~~~~~~~~-~~g~~~vi~~~~~-~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~  272 (347)
T cd05278         195 IIAVDSNPERLDLAK-EAGATDIINPKNG-DIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKP  272 (347)
T ss_pred             EEEEeCCHHHHHHHH-HhCCcEEEcCCcc-hHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCC
Confidence            999988888888888 9999999988877 788888887765 89999999997 6889999999999999999853321


Q ss_pred             CCCCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceec--cceeecCCcHHHHHHHhhcCCC-cce
Q 026217          157 NNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYV--EDKAEGLESAPAALVGLFSGRN-VGK  233 (241)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~l~~~~~a~~~l~~~~~-~gk  233 (241)
                           .........+.+++++.+.....     .+.+..+++++.+|.+++.  +...+++++++++++.+..++. .+|
T Consensus       273 -----~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~  342 (347)
T cd05278         273 -----DPLPLLGEWFGKNLTFKTGLVPV-----RARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIK  342 (347)
T ss_pred             -----cccCccchhhhceeEEEeeccCc-----hhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceE
Confidence                 10112223456777777754322     5678889999999999864  5678999999999999988776 679


Q ss_pred             EEEEe
Q 026217          234 QVVEV  238 (241)
Q Consensus       234 ~vv~~  238 (241)
                      +++++
T Consensus       343 ~vv~~  347 (347)
T cd05278         343 VVIRP  347 (347)
T ss_pred             EEecC
Confidence            98763

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=99.96  E-value=2.2e-26  Score=187.13  Aligned_cols=218  Identities=19%  Similarity=0.258  Sum_probs=180.4

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVG   81 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~   81 (241)
                      |+|++|+.++++ ++++ |++++.. +++.+ ..++++++++ ....+.++++|||+| +|.+|++++|+|+.+|++|++
T Consensus       115 g~~~~~v~v~~~-~~~~-p~~~~~~-~aa~~-~~~~~a~~~~-~~~~l~~g~~vLI~g-~g~vG~~a~~lA~~~g~~v~~  188 (337)
T cd08261         115 GGFAEYIVVPAD-ALLV-PEGLSLD-QAALV-EPLAIGAHAV-RRAGVTAGDTVLVVG-AGPIGLGVIQVAKARGARVIV  188 (337)
T ss_pred             CcceeEEEechh-eEEC-CCCCCHH-Hhhhh-chHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEE
Confidence            789999999999 9999 9994433 24444 6788999988 678999999999997 599999999999999999999


Q ss_pred             EeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeecccCCC
Q 026217           82 SAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNND  159 (241)
Q Consensus        82 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~  159 (241)
                      +++++++.++++ ++|+++++++++. ++.+.+....++ ++|+++||+|+ ..+..++++++++|+++.+|....    
T Consensus       189 ~~~s~~~~~~~~-~~g~~~v~~~~~~-~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~----  262 (337)
T cd08261         189 VDIDDERLEFAR-ELGADDTINVGDE-DVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHGGRVVLVGLSKG----  262 (337)
T ss_pred             ECCCHHHHHHHH-HhCCCEEecCccc-CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCC----
Confidence            998999999998 8999999999887 788888887766 89999999985 678889999999999999886431    


Q ss_pred             CCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCcee--ccceeecCCcHHHHHHHhhcC-CCcceEEE
Q 026217          160 KPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSG-RNVGKQVV  236 (241)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~l~~~-~~~gk~vv  236 (241)
                        ....+...+..+++++.+...     ...+.+..+.+++.+|.+++  .+..+++++++.++++.++++ ...+|+|+
T Consensus       263 --~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~  335 (337)
T cd08261         263 --PVTFPDPEFHKKELTILGSRN-----ATREDFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLI  335 (337)
T ss_pred             --CCccCHHHHHhCCCEEEEecc-----CChhhHHHHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEE
Confidence              112233345567777776532     23567888999999999998  677889999999999999988 47789998


Q ss_pred             Ee
Q 026217          237 EV  238 (241)
Q Consensus       237 ~~  238 (241)
                      ++
T Consensus       336 ~~  337 (337)
T cd08261         336 EF  337 (337)
T ss_pred             eC
Confidence            64

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.96  E-value=1.5e-26  Score=185.49  Aligned_cols=218  Identities=22%  Similarity=0.280  Sum_probs=178.7

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVG   81 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~   81 (241)
                      |+|++|+.++.+.++++ |++++.. +++++++.+.|||+++.+.... +|++++|+|++|++|+++++++++.|++|++
T Consensus        86 g~~~~~~~v~~~~~~~i-p~~~~~~-~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~  162 (305)
T cd08270          86 GAWAELVAVPTGWLAVL-PDGVSFA-QAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGAHVVA  162 (305)
T ss_pred             cceeeEEEEchHHeEEC-CCCCCHH-HHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCCEEEE
Confidence            79999999999999999 9995554 4889999999999999776545 6999999999999999999999999999999


Q ss_pred             EeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCCCC
Q 026217           82 SAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKP  161 (241)
Q Consensus        82 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~  161 (241)
                      +++++++.+.++ ++|++.+++...  .       ..++++|+++|++|+.....++++++++|+++.+|....     .
T Consensus       163 ~~~~~~~~~~~~-~~g~~~~~~~~~--~-------~~~~~~d~vl~~~g~~~~~~~~~~l~~~G~~v~~g~~~~-----~  227 (305)
T cd08270         163 VVGSPARAEGLR-ELGAAEVVVGGS--E-------LSGAPVDLVVDSVGGPQLARALELLAPGGTVVSVGSSSG-----E  227 (305)
T ss_pred             EeCCHHHHHHHH-HcCCcEEEeccc--c-------ccCCCceEEEECCCcHHHHHHHHHhcCCCEEEEEeccCC-----C
Confidence            999999999999 799876553321  1       122479999999999888999999999999999987431     1


Q ss_pred             CCccChHHHhh--cceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEEEe
Q 026217          162 EGVHNLTCLIS--KRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  238 (241)
Q Consensus       162 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv~~  238 (241)
                      ....+...+..  ++.++.++.... +....+.+..+.+++.++++++.+.+++++++++++++.+.+++..||+|+.+
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~  305 (305)
T cd08270         228 PAVFNPAAFVGGGGGRRLYTFFLYD-GEPLAADLARLLGLVAAGRLDPRIGWRGSWTEIDEAAEALLARRFRGKAVLDV  305 (305)
T ss_pred             cccccHHHHhcccccceEEEEEccC-HHHHHHHHHHHHHHHHCCCccceeccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            12233333333  588888877654 33446778889999999999988778999999999999999998889999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=99.96  E-value=1.7e-26  Score=190.88  Aligned_cols=220  Identities=22%  Similarity=0.265  Sum_probs=181.1

Q ss_pred             CccceEEeecCC--ceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-E
Q 026217            2 TGWEEYSLVTAP--RLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-Y   78 (241)
Q Consensus         2 G~~ae~~~v~~~--~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~   78 (241)
                      |+|+||++++++  .++++ |++++.. +++.++.+++|||+++ ..+.+.++++|+|+| +|++|++++++|+..|+ +
T Consensus       136 g~~~~~~~v~~~~~~~~~l-p~~~~~~-~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g-~G~vG~~~~~la~~~g~~~  211 (386)
T cd08283         136 GGQAEYVRVPFADVGPFKI-PDDLSDE-KALFLSDILPTGYHAA-ELAEVKPGDTVAVWG-CGPVGLFAARSAKLLGAER  211 (386)
T ss_pred             CeeEEEEEcccccCeEEEC-CCCCCHH-HHhhhccchhhhHHHH-hhccCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCE
Confidence            789999999988  89999 9995444 3778899999999999 778999999999997 59999999999999998 6


Q ss_pred             EEEEeCCHHHHHHHHHHcCCCeeecCCCchh-HHHHHHHHCCC-CccEEEeCCCch----------------------hH
Q 026217           79 VVGSAGSKDKVDLLKNKFGFDEAFNYKEEPD-LDAALKRYFPE-GINIYFENVGGK----------------------ML  134 (241)
Q Consensus        79 v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~-~~~~i~~~~~~-~~d~v~d~~g~~----------------------~~  134 (241)
                      |+++++++++.+.++ +++...++++... + +.+.+++.+++ ++|++|||+|++                      .+
T Consensus       212 vi~~~~~~~~~~~~~-~~~~~~vi~~~~~-~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (386)
T cd08283         212 VIAIDRVPERLEMAR-SHLGAETINFEEV-DDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDAL  289 (386)
T ss_pred             EEEEcCCHHHHHHHH-HcCCcEEEcCCcc-hHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHH
Confidence            999999999999999 7743467777664 4 77888888776 899999999753                      57


Q ss_pred             HHHHHhhccCCEEEEEeeecccCCCCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceec--ccee
Q 026217          135 DAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYV--EDKA  212 (241)
Q Consensus       135 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~  212 (241)
                      ..++++++++|+++.+|....     .....+....+.+++++.+.....     .+.+..+++++.++.+.+.  +...
T Consensus       290 ~~~~~~l~~~G~iv~~g~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~~l~~g~l~~~~~~~~~  359 (386)
T cd08283         290 REAIQAVRKGGTVSIIGVYGG-----TVNKFPIGAAMNKGLTLRMGQTHV-----QRYLPRLLELIESGELDPSFIITHR  359 (386)
T ss_pred             HHHHHHhccCCEEEEEcCCCC-----CcCccCHHHHHhCCcEEEeccCCc-----hHHHHHHHHHHHcCCCChhHceEEE
Confidence            889999999999999987432     112234446678889888875432     5678889999999999873  5678


Q ss_pred             ecCCcHHHHHHHhhcCC-CcceEEEE
Q 026217          213 EGLESAPAALVGLFSGR-NVGKQVVE  237 (241)
Q Consensus       213 ~~l~~~~~a~~~l~~~~-~~gk~vv~  237 (241)
                      ++++++.+|++.+.+++ ..+|++++
T Consensus       360 ~~l~~~~~a~~~~~~~~~~~~k~~~~  385 (386)
T cd08283         360 LPLEDAPEAYKIFDKKEDGCIKVVLK  385 (386)
T ss_pred             ecHHHHHHHHHHHHhCCCCeEEEEec
Confidence            99999999999998876 56899986

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>cd08251 polyketide_synthase polyketide synthase

Probab=99.95  E-value=1.5e-26  Score=185.01  Aligned_cols=225  Identities=20%  Similarity=0.304  Sum_probs=185.2

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVG   81 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~   81 (241)
                      |+|++|+.++++.++++ |++++.. ++++++.++++||+++ +...+++|++++|+|+++++|++++|+++++|++|++
T Consensus        74 g~~~~~~~~~~~~~~~~-p~~~~~~-~aa~~~~~~~ta~~~l-~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~  150 (303)
T cd08251          74 GGHATLVTVPEDQVVRK-PASLSFE-EACALPVVFLTVIDAF-ARAGLAKGEHILIQTATGGTGLMAVQLARLKGAEIYA  150 (303)
T ss_pred             cceeeEEEccHHHeEEC-CCCCCHH-HHHHhHHHHHHHHHHH-HhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEE
Confidence            89999999999999999 9995544 4788999999999998 4688999999999999999999999999999999999


Q ss_pred             EeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCCC
Q 026217           82 SAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDK  160 (241)
Q Consensus        82 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~  160 (241)
                      +++++++.+.++ ++|++.+++.... ++...+...+++ ++|.++|++++......+++++++|+++.+|..+..    
T Consensus       151 ~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~i~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~----  224 (303)
T cd08251         151 TASSDDKLEYLK-QLGVPHVINYVEE-DFEEEIMRLTGGRGVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMTALK----  224 (303)
T ss_pred             EcCCHHHHHHHH-HcCCCEEEeCCCc-cHHHHHHHHcCCCCceEEEECCcHHHHHHHHHHhccCcEEEEEeccCCC----
Confidence            999999999998 8999989888776 788888888776 899999999988888999999999999998864311    


Q ss_pred             CCCccChHHHhhcceEEEEeecccc----cchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEE
Q 026217          161 PEGVHNLTCLISKRIRMEGFLVPDY----FHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVV  236 (241)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv  236 (241)
                      ...... ...+.+++.+........    +....+.+.++.+++.+|.+++.....+++++++++++.+.+++..||+++
T Consensus       225 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~  303 (303)
T cd08251         225 SAPSVD-LSVLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELRPTVSRIFPFDDIGEAYRYLSDRENIGKVVV  303 (303)
T ss_pred             ccCccC-hhHhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCccCCCceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence            001111 123445555555443222    233456788889999999998887889999999999999999888888874

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=99.95  E-value=1.5e-26  Score=189.04  Aligned_cols=223  Identities=19%  Similarity=0.210  Sum_probs=176.8

Q ss_pred             CccceEEeecCC--ceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-E
Q 026217            2 TGWEEYSLVTAP--RLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-Y   78 (241)
Q Consensus         2 G~~ae~~~v~~~--~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~   78 (241)
                      |+|+||+.++.+  .++++ |++++.. +++.++.++.|||+++ ....++++++|+|+| +|++|++++|+|+..|+ .
T Consensus       118 g~~~~y~~v~~~~~~~~~l-P~~~~~~-~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g-~g~iG~~~~~lak~~G~~~  193 (351)
T cd08285         118 GVFAEYFHVNDADANLAPL-PDGLTDE-QAVMLPDMMSTGFHGA-ELANIKLGDTVAVFG-IGPVGLMAVAGARLRGAGR  193 (351)
T ss_pred             cceeEEEEcchhhCceEEC-CCCCCHH-HhhhhccchhhHHHHH-HccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCe
Confidence            789999999974  89999 9985544 3778889999999997 667899999999997 59999999999999999 6


Q ss_pred             EEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeeccc
Q 026217           79 VVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQY  156 (241)
Q Consensus        79 v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~  156 (241)
                      |+++++++++.+.++ ++|+++++++++. ++.+++.+...+ ++|+++||+|+ ..+..++++++++|+++.+|.....
T Consensus       194 v~~~~~~~~~~~~~~-~~g~~~~v~~~~~-~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~  271 (351)
T cd08285         194 IIAVGSRPNRVELAK-EYGATDIVDYKNG-DVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGED  271 (351)
T ss_pred             EEEEeCCHHHHHHHH-HcCCceEecCCCC-CHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCC
Confidence            899988888999999 9999999998877 788888887765 89999999996 6789999999999999999874321


Q ss_pred             CCCCCCCccC--hHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCcee---ccceeecCCcHHHHHHHhhcCC-C
Q 026217          157 NNDKPEGVHN--LTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVY---VEDKAEGLESAPAALVGLFSGR-N  230 (241)
Q Consensus       157 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~l~~~~~a~~~l~~~~-~  230 (241)
                          .....+  ......+..++.+.....    ..+.+.++++++.+|++++   .....++++++++|++.+++++ .
T Consensus       272 ----~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~  343 (351)
T cd08285         272 ----DYLPIPREEWGVGMGHKTINGGLCPG----GRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDD  343 (351)
T ss_pred             ----ceeecChhhhhhhccccEEEEeecCC----ccccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCC
Confidence                001111  111123344454433211    1456888999999999998   3445689999999999999987 4


Q ss_pred             cceEEEEe
Q 026217          231 VGKQVVEV  238 (241)
Q Consensus       231 ~gk~vv~~  238 (241)
                      ..|+++++
T Consensus       344 ~~k~~~~~  351 (351)
T cd08285         344 LIKPVIIF  351 (351)
T ss_pred             eEEEEEeC
Confidence            68999864

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.95  E-value=3.3e-26  Score=185.80  Aligned_cols=221  Identities=26%  Similarity=0.347  Sum_probs=190.8

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVG   81 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~   81 (241)
                      |+|++|+.++.+.++++ |+++++. +++.++.++++||+++.....+++|++++|+| +|++|+++++++++.|++|++
T Consensus       113 g~~~~~~~~~~~~~~~l-p~~~~~~-~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g-~g~~g~~~~~~a~~~G~~v~~  189 (336)
T cd08276         113 GVLAEYVVLPEEGLVRA-PDHLSFE-EAATLPCAGLTAWNALFGLGPLKPGDTVLVQG-TGGVSLFALQFAKAAGARVIA  189 (336)
T ss_pred             ceeeeEEEecHHHeEEC-CCCCCHH-HhhhhhHHHHHHHHHHHhhcCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEE
Confidence            67999999999999999 9885444 47788999999999998888899999999996 699999999999999999999


Q ss_pred             EeCCHHHHHHHHHHcCCCeeecCCC-chhHHHHHHHHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCC
Q 026217           82 SAGSKDKVDLLKNKFGFDEAFNYKE-EPDLDAALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNND  159 (241)
Q Consensus        82 ~~~~~~~~~~~~~~~g~~~~i~~~~-~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~  159 (241)
                      ++.++++.+.++ ++|.+.+++.+. . ++...+...+++ ++|+++|++++.....++++++++|+++.+|....    
T Consensus       190 ~~~~~~~~~~~~-~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~G~~v~~g~~~~----  263 (336)
T cd08276         190 TSSSDEKLERAK-ALGADHVINYRTTP-DWGEEVLKLTGGRGVDHVVEVGGPGTLAQSIKAVAPGGVISLIGFLSG----  263 (336)
T ss_pred             EeCCHHHHHHHH-HcCCCEEEcCCccc-CHHHHHHHHcCCCCCcEEEECCChHHHHHHHHhhcCCCEEEEEccCCC----
Confidence            999999999999 789988888776 5 778888888776 99999999998888999999999999999987432    


Q ss_pred             CCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEEE
Q 026217          160 KPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVE  237 (241)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv~  237 (241)
                       .....+....+.+++++.+.....     .+.+.++++++.++.+.+.+...+++++++++++.+.+++..+|++++
T Consensus       264 -~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~  335 (336)
T cd08276         264 -FEAPVLLLPLLTKGATLRGIAVGS-----RAQFEAMNRAIEAHRIRPVIDRVFPFEEAKEAYRYLESGSHFGKVVIR  335 (336)
T ss_pred             -CccCcCHHHHhhcceEEEEEecCc-----HHHHHHHHHHHHcCCcccccCcEEeHHHHHHHHHHHHhCCCCceEEEe
Confidence             112345567788999999987654     567888889999998887777889999999999999988888899986

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=99.95  E-value=1.3e-26  Score=188.65  Aligned_cols=220  Identities=21%  Similarity=0.258  Sum_probs=179.3

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCC----------CCCcEEEEEcCCchHHHHHHHH
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSP----------KQGEYVFVSAASGAVGQLVGQF   71 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~----------~~~~~vlI~ga~g~~G~~avql   71 (241)
                      |+|++|+.++.+.++++ |++++.. +++.+++++.|||+++.+...+          .++++++|+|++|++|++++++
T Consensus        97 g~~~~~~~v~~~~~~~i-p~~~~~~-~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~  174 (339)
T cd08249          97 GAFQEYVVADADLTAKI-PDNISFE-EAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQL  174 (339)
T ss_pred             CcccceEEechhheEEC-CCCCCHH-HceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHH
Confidence            89999999999999999 9985554 3778899999999999776554          7899999999999999999999


Q ss_pred             HHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCc-hhHHHHHHhhcc--CCEEE
Q 026217           72 AKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRI--QGRIT  148 (241)
Q Consensus        72 a~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~--~G~~v  148 (241)
                      |+.+|++|++++ ++++.+.++ ++|+++++++++. ++.+.++...++++|+++|++|+ ..+..+++++++  +|+++
T Consensus       175 a~~~G~~v~~~~-~~~~~~~~~-~~g~~~v~~~~~~-~~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~g~~v  251 (339)
T cd08249         175 AKLAGYKVITTA-SPKNFDLVK-SLGADAVFDYHDP-DVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGGGKLV  251 (339)
T ss_pred             HHHcCCeEEEEE-CcccHHHHH-hcCCCEEEECCCc-hHHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCCCEEE
Confidence            999999999988 568889997 8999999998877 88888887776789999999997 889999999999  99999


Q ss_pred             EEeeecccCCCCCCCccChHHHhhcceEEEE---eecc----cccchhHHHHHHHHHHHHcCCceeccceeec--CCcHH
Q 026217          149 LCGMISQYNNDKPEGVHNLTCLISKRIRMEG---FLVP----DYFHLYPKFLEMMIPRIKEGKIVYVEDKAEG--LESAP  219 (241)
Q Consensus       149 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~----~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--l~~~~  219 (241)
                      .+|......            .+..+..+..   ..+.    ..+......+..+.+++.++.+.+.+...++  +++++
T Consensus       252 ~~g~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  319 (339)
T cd08249         252 SLLPVPEET------------EPRKGVKVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPHPVRVVEGGLEGVQ  319 (339)
T ss_pred             EecCCCccc------------cCCCCceEEEEEeeeecccccccccchHHHHHHHHHHHHcCCccCCCceecCCcHHHHH
Confidence            998743211            0111222222   2211    1123335678889999999999987767888  99999


Q ss_pred             HHHHHhhcCC-CcceEEEEe
Q 026217          220 AALVGLFSGR-NVGKQVVEV  238 (241)
Q Consensus       220 ~a~~~l~~~~-~~gk~vv~~  238 (241)
                      +|++.+.+++ ..+|+|+++
T Consensus       320 ~a~~~~~~~~~~~~kvvv~~  339 (339)
T cd08249         320 EGLDLLRKGKVSGEKLVVRL  339 (339)
T ss_pred             HHHHHHHCCCccceEEEEeC
Confidence            9999999988 889999874

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.95  E-value=2.5e-26  Score=186.76  Aligned_cols=214  Identities=23%  Similarity=0.228  Sum_probs=179.8

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVG   81 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~   81 (241)
                      |+|+||+.++.+.++++ |++++.. +++.+++.+.|||+++.+ ..+.+|++++|.| .|++|+++++++++.|++|++
T Consensus       123 g~~~~~~~v~~~~~~~l-p~~~~~~-~aa~l~~~~~ta~~~~~~-~~~~~g~~vlV~g-~g~vG~~~~~~a~~~G~~v~~  198 (337)
T cd05283         123 GGYADHIVVDERFVFKI-PEGLDSA-AAAPLLCAGITVYSPLKR-NGVGPGKRVGVVG-IGGLGHLAVKFAKALGAEVTA  198 (337)
T ss_pred             CcceeEEEechhheEEC-CCCCCHH-HhhhhhhHHHHHHHHHHh-cCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCeEEE
Confidence            78999999999999999 9995555 478899999999999965 4689999999977 699999999999999999999


Q ss_pred             EeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCch-hHHHHHHhhccCCEEEEEeeecccCCCC
Q 026217           82 SAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGK-MLDAVLLNMRIQGRITLCGMISQYNNDK  160 (241)
Q Consensus        82 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~  160 (241)
                      +++++++.+.++ ++|++.+++.+.. ++...    .++++|+++||+|+. ....++++++++|+++.+|....     
T Consensus       199 ~~~~~~~~~~~~-~~g~~~vi~~~~~-~~~~~----~~~~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----  267 (337)
T cd05283         199 FSRSPSKKEDAL-KLGADEFIATKDP-EAMKK----AAGSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEE-----  267 (337)
T ss_pred             EcCCHHHHHHHH-HcCCcEEecCcch-hhhhh----ccCCceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCC-----
Confidence            999999999998 8999888877654 33222    234799999999986 58899999999999999987432     


Q ss_pred             CCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEEE
Q 026217          161 PEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVE  237 (241)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv~  237 (241)
                      . ...+...++.+++++.+.....     .+.++.+++++.+|.+++.+ ..++++++++||+.+.+++..||+|++
T Consensus       268 ~-~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~~k~v~~  337 (337)
T cd05283         268 P-LPVPPFPLIFGRKSVAGSLIGG-----RKETQEMLDFAAEHGIKPWV-EVIPMDGINEALERLEKGDVRYRFVLD  337 (337)
T ss_pred             C-CccCHHHHhcCceEEEEecccC-----HHHHHHHHHHHHhCCCccce-EEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence            1 1345556678999999987764     56788899999999998765 689999999999999999999998874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=99.95  E-value=2.5e-26  Score=186.54  Aligned_cols=218  Identities=26%  Similarity=0.332  Sum_probs=179.7

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVG   81 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~   81 (241)
                      |+|++|+.++.+.++++ |++++.. +++.+++++.+||+++.+. .+.++++++|+|++|.+|++++|++++.|++|++
T Consensus       116 g~~~~~~~~~~~~~~~l-p~~~~~~-~~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~  192 (334)
T PRK13771        116 GFFAEYAKVKVTSLVKV-PPNVSDE-GAVIVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIA  192 (334)
T ss_pred             ceeeeeeecchhceEEC-CCCCCHH-HhhcccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCCEEEE
Confidence            78999999999999999 9985554 4788899999999999765 8999999999999999999999999999999999


Q ss_pred             EeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCCCC
Q 026217           82 SAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKP  161 (241)
Q Consensus        82 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~  161 (241)
                      +++++++.+.++ ++ ++++++++   ++.+.++..  +++|+++||+|+.....++++++++|+++.+|.....    .
T Consensus       193 ~~~~~~~~~~~~-~~-~~~~~~~~---~~~~~v~~~--~~~d~~ld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~----~  261 (334)
T PRK13771        193 VTSSESKAKIVS-KY-ADYVIVGS---KFSEEVKKI--GGADIVIETVGTPTLEESLRSLNMGGKIIQIGNVDPS----P  261 (334)
T ss_pred             EeCCHHHHHHHH-HH-HHHhcCch---hHHHHHHhc--CCCcEEEEcCChHHHHHHHHHHhcCCEEEEEeccCCC----C
Confidence            999999999998 77 76666654   345556554  3699999999988889999999999999999974321    1


Q ss_pred             CCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEEEe
Q 026217          162 EGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  238 (241)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv~~  238 (241)
                      .........+.+++++.+.....     .+.+..+++++.++.+++.+...++++++++|++.+.++...||++++.
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  333 (334)
T PRK13771        262 TYSLRLGYIILKDIEIIGHISAT-----KRDVEEALKLVAEGKIKPVIGAEVSLSEIDKALEELKDKSRIGKILVKP  333 (334)
T ss_pred             CcccCHHHHHhcccEEEEecCCC-----HHHHHHHHHHHHcCCCcceEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence            10122333456788887764322     6678889999999999888888999999999999999988889999865

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=99.95  E-value=4.6e-26  Score=185.22  Aligned_cols=219  Identities=24%  Similarity=0.354  Sum_probs=184.2

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVG   81 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~   81 (241)
                      |+|++|+.++.+.++++ |++++.. ++++++.+++|||+++.....++++++|+|.| +|++|++++++|+..|++|++
T Consensus       118 g~~~~~~~~~~~~~~~l-p~~~~~~-~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g-~g~vG~~~~~la~~~G~~V~~  194 (338)
T cd08254         118 GGFAEYIVVPARALVPV-PDGVPFA-QAAVATDAVLTPYHAVVRAGEVKPGETVLVIG-LGGLGLNAVQIAKAMGAAVIA  194 (338)
T ss_pred             CcceeeEEechHHeEEC-CCCCCHH-HhhhhcchHHHHHHHHHhccCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEE
Confidence            78999999999999999 9985544 47889999999999998888899999999976 599999999999999999999


Q ss_pred             EeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeecccCCC
Q 026217           82 SAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNND  159 (241)
Q Consensus        82 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~  159 (241)
                      +++++++.+.++ ++|.+++++.++. .....+ ....+ ++|+++||+|. ..+..++++++++|+++.+|....    
T Consensus       195 ~~~s~~~~~~~~-~~g~~~~~~~~~~-~~~~~~-~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~----  267 (338)
T cd08254         195 VDIKEEKLELAK-ELGADEVLNSLDD-SPKDKK-AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRD----  267 (338)
T ss_pred             EcCCHHHHHHHH-HhCCCEEEcCCCc-CHHHHH-HHhcCCCceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCC----
Confidence            999999999998 8999888887765 666666 44444 89999999985 688899999999999999986331    


Q ss_pred             CCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEEEe
Q 026217          160 KPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  238 (241)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv~~  238 (241)
                        ....+...++.++.++.+.....     .+.+..+.+++.++.+++. ...++++++.++++.+.+++..||+|+++
T Consensus       268 --~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ll~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  338 (338)
T cd08254         268 --KLTVDLSDLIARELRIIGSFGGT-----PEDLPEVLDLIAKGKLDPQ-VETRPLDEIPEVLERLHKGKVKGRVVLVP  338 (338)
T ss_pred             --CCccCHHHHhhCccEEEEeccCC-----HHHHHHHHHHHHcCCCccc-ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence              11234456677888888765443     5678889999999999876 67899999999999999999899999874

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=99.95  E-value=6.7e-26  Score=182.87  Aligned_cols=227  Identities=28%  Similarity=0.394  Sum_probs=191.3

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVG   81 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~   81 (241)
                      |++++|+.++++.++++ |++++.. +++++++++.+||+++.....+.++++++|+|+++++|++++++++..|++|++
T Consensus        97 g~~~~~~~~~~~~~~~i-p~~~~~~-~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~  174 (325)
T cd08253          97 GTAAEYVVVPADQLVPL-PDGVSFE-QGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGARVIA  174 (325)
T ss_pred             cceeeEEEecHHHcEeC-CCCCCHH-HHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEE
Confidence            78999999999999999 9985544 478999999999999988789999999999999999999999999999999999


Q ss_pred             EeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCCC
Q 026217           82 SAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDK  160 (241)
Q Consensus        82 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~  160 (241)
                      +++++++.+.++ ++|.+++++.... ++...+.....+ ++|+++||+++......+++++++|+++.+|....     
T Consensus       175 ~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~~~~~~-----  247 (325)
T cd08253         175 TASSAEGAELVR-QAGADAVFNYRAE-DLADRILAATAGQGVDVIIEVLANVNLAKDLDVLAPGGRIVVYGSGGL-----  247 (325)
T ss_pred             EeCCHHHHHHHH-HcCCCEEEeCCCc-CHHHHHHHHcCCCceEEEEECCchHHHHHHHHhhCCCCEEEEEeecCC-----
Confidence            999999999998 8999888888776 777788777665 89999999998888888999999999999987431     


Q ss_pred             CCCccChHHHhhcceEEEEeecccc-cchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEEEe
Q 026217          161 PEGVHNLTCLISKRIRMEGFLVPDY-FHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  238 (241)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv~~  238 (241)
                       ........++.++.++.+...... +....+.+..+.+++.++.+++.+...++++++.++++.+.++...||+++++
T Consensus       248 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~  325 (325)
T cd08253         248 -RGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLADGALRPVIAREYPLEEAAAAHEAVESGGAIGKVVLDP  325 (325)
T ss_pred             -cCCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHCCCccCccccEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence             112333345677888877664432 34456678888889999999888888999999999999999988889999863

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PRK10083 putative oxidoreductase; Provisional

Probab=99.95  E-value=5.6e-26  Score=184.90  Aligned_cols=219  Identities=17%  Similarity=0.178  Sum_probs=175.4

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHH-cCC-EE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKL-VGC-YV   79 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~-~g~-~v   79 (241)
                      |+|+||+.++...++++ |+++  +++.+++..++.++|+++ ...++++|++|+|+| +|++|++++|+|++ +|+ .+
T Consensus       115 g~~~~~~~~~~~~~~~i-p~~~--~~~~a~~~~~~~~a~~~~-~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~~G~~~v  189 (339)
T PRK10083        115 GGFSEYAVVPAKNAHRI-PDAI--ADQYAVMVEPFTIAANVT-GRTGPTEQDVALIYG-AGPVGLTIVQVLKGVYNVKAV  189 (339)
T ss_pred             CcceeeEEechHHeEEC-cCCC--CHHHHhhhchHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHhCCCCEE
Confidence            78999999999999999 9984  434455777888898655 667899999999999 69999999999997 599 57


Q ss_pred             EEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeecccCC
Q 026217           80 VGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNN  158 (241)
Q Consensus        80 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~  158 (241)
                      +++++++++.+.++ ++|+++++++++. ++.+.+... +.++|++||++|+ ..+..++++++++|+++.+|..+.   
T Consensus       190 ~~~~~~~~~~~~~~-~~Ga~~~i~~~~~-~~~~~~~~~-g~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~---  263 (339)
T PRK10083        190 IVADRIDERLALAK-ESGADWVINNAQE-PLGEALEEK-GIKPTLIIDAACHPSILEEAVTLASPAARIVLMGFSSE---  263 (339)
T ss_pred             EEEcCCHHHHHHHH-HhCCcEEecCccc-cHHHHHhcC-CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC---
Confidence            77888889999998 9999999988776 677666432 1157899999995 678999999999999999987431   


Q ss_pred             CCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCcee--ccceeecCCcHHHHHHHhhcCC-CcceEE
Q 026217          159 DKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGR-NVGKQV  235 (241)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~l~~~~-~~gk~v  235 (241)
                         ....+...+..+++++.+...      ..+.+..+++++.+|.+++  .+.++|+++++++|++.+.++. ..+|++
T Consensus       264 ---~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvv  334 (339)
T PRK10083        264 ---PSEIVQQGITGKELSIFSSRL------NANKFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVL  334 (339)
T ss_pred             ---CceecHHHHhhcceEEEEEec------ChhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEE
Confidence               112233444567777776543      1467888999999999987  3678999999999999998654 568999


Q ss_pred             EEecC
Q 026217          236 VEVAT  240 (241)
Q Consensus       236 v~~~~  240 (241)
                      +.+.|
T Consensus       335 v~~~~  339 (339)
T PRK10083        335 LTFAE  339 (339)
T ss_pred             EecCC
Confidence            98864

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=99.95  E-value=6.1e-26  Score=184.95  Aligned_cols=219  Identities=22%  Similarity=0.261  Sum_probs=180.0

Q ss_pred             CccceEEeecCCc-----eeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcC
Q 026217            2 TGWEEYSLVTAPR-----LFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVG   76 (241)
Q Consensus         2 G~~ae~~~v~~~~-----~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g   76 (241)
                      |+|++|+.++.+.     ++++ |++++.. +++ +..++.+||+++.. ..+++|++|+|+| +|++|++++|+|++.|
T Consensus       115 g~~~~~v~v~~~~~~~~~~~~l-P~~~~~~-~aa-~~~~~~~a~~~l~~-~~~~~g~~VlV~g-~g~vg~~~~~la~~~g  189 (343)
T cd08235         115 GGFAEYVRVPAWAVKRGGVLKL-PDNVSFE-EAA-LVEPLACCINAQRK-AGIKPGDTVLVIG-AGPIGLLHAMLAKASG  189 (343)
T ss_pred             CcceeeEEecccccccccEEEC-CCCCCHH-HHH-hhhHHHHHHHHHHh-cCCCCCCEEEEEC-CCHHHHHHHHHHHHcC
Confidence            7899999999998     9999 9995444 244 44888999999955 5899999999997 5999999999999999


Q ss_pred             CE-EEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEeee
Q 026217           77 CY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMI  153 (241)
Q Consensus        77 ~~-v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~  153 (241)
                      ++ |+++++++++.+.++ ++|.++++++++. ++.+.+.+..++ ++|+++||+++ ......+++++++|+++.+|..
T Consensus       190 ~~~v~~~~~s~~~~~~~~-~~g~~~~~~~~~~-~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~  267 (343)
T cd08235         190 ARKVIVSDLNEFRLEFAK-KLGADYTIDAAEE-DLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGL  267 (343)
T ss_pred             CcEEEEECCCHHHHHHHH-HhCCcEEecCCcc-CHHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEecc
Confidence            98 999998999999998 8999999998887 888888887776 89999999996 5888999999999999998864


Q ss_pred             cccCCCCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCcee--ccceeecCCcHHHHHHHhhcCCCc
Q 026217          154 SQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNV  231 (241)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~l~~~~~~  231 (241)
                      ...    .....+......+++.+.+.....     .+.++.+++++.++.+++  .+..+++++++.++++.+.+++ .
T Consensus       268 ~~~----~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~  337 (343)
T cd08235         268 PKG----STVNIDPNLIHYREITITGSYAAS-----PEDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGK-S  337 (343)
T ss_pred             CCC----CCcccCHHHHhhCceEEEEEecCC-----hhhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCC-c
Confidence            321    112233455666777777665433     456788899999999873  4567899999999999999998 8


Q ss_pred             ceEEEE
Q 026217          232 GKQVVE  237 (241)
Q Consensus       232 gk~vv~  237 (241)
                      +|+|++
T Consensus       338 ~k~vi~  343 (343)
T cd08235         338 LKIVIT  343 (343)
T ss_pred             EEEEeC
Confidence            899873

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=99.95  E-value=4.3e-26  Score=185.87  Aligned_cols=216  Identities=20%  Similarity=0.245  Sum_probs=175.4

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCE-EE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-VV   80 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~-v~   80 (241)
                      |+|++|++++++.++++ |++++.. +++. ..++.+|++++ ..+.++++++|+|+| +|++|++++|+|+++|++ |+
T Consensus       117 g~~~~~~~v~~~~~~~l-P~~~~~~-~aa~-~~~~~~a~~~~-~~~~~~~g~~vlI~g-~g~vG~~a~~lak~~G~~~v~  191 (343)
T cd05285         117 GTLCRYVNHPADFCHKL-PDNVSLE-EGAL-VEPLSVGVHAC-RRAGVRPGDTVLVFG-AGPIGLLTAAVAKAFGATKVV  191 (343)
T ss_pred             CceeeeEEecHHHcEEC-cCCCCHH-Hhhh-hhHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEE
Confidence            78999999999999999 9994444 2444 46889999997 778999999999987 599999999999999997 99


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCchhH---HHHHHHHCCC-CccEEEeCCCch-hHHHHHHhhccCCEEEEEeeecc
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEEPDL---DAALKRYFPE-GINIYFENVGGK-MLDAVLLNMRIQGRITLCGMISQ  155 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~---~~~i~~~~~~-~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~  155 (241)
                      ++++++++.+.++ ++|+++++++++. ++   .+.+.+.+++ ++|+++||+|+. .+...+++++++|+++.+|....
T Consensus       192 ~~~~~~~~~~~~~-~~g~~~vi~~~~~-~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  269 (343)
T cd05285         192 VTDIDPSRLEFAK-ELGATHTVNVRTE-DTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPGGTVVLVGMGKP  269 (343)
T ss_pred             EECCCHHHHHHHH-HcCCcEEeccccc-cchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC
Confidence            9998999999998 8999999988775 53   7777777766 899999999975 88899999999999999986321


Q ss_pred             cCCCCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCce--eccceeecCCcHHHHHHHhhcCC-Ccc
Q 026217          156 YNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIV--YVEDKAEGLESAPAALVGLFSGR-NVG  232 (241)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~l~~~~~a~~~l~~~~-~~g  232 (241)
                           . ...+......+++.+.+....      .+.+..+++++.++.+.  +.+.++++++++.+|++.+.+++ ..+
T Consensus       270 -----~-~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~  337 (343)
T cd05285         270 -----E-VTLPLSAASLREIDIRGVFRY------ANTYPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVI  337 (343)
T ss_pred             -----C-CccCHHHHhhCCcEEEEeccC------hHHHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCee
Confidence                 1 123334566677777765432      25678888999999865  44667899999999999999874 558


Q ss_pred             eEEE
Q 026217          233 KQVV  236 (241)
Q Consensus       233 k~vv  236 (241)
                      |+++
T Consensus       338 k~~~  341 (343)
T cd05285         338 KVVI  341 (343)
T ss_pred             EEEE
Confidence            9988

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=99.95  E-value=7.3e-26  Score=184.66  Aligned_cols=220  Identities=18%  Similarity=0.156  Sum_probs=181.1

Q ss_pred             CccceEEeecCC--ceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcC-CE
Q 026217            2 TGWEEYSLVTAP--RLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVG-CY   78 (241)
Q Consensus         2 G~~ae~~~v~~~--~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g-~~   78 (241)
                      |+|++|+.++++  .++++ |++++.. +++.++.+++|||+++.....+.++++++|+|+ |++|++++|+|+..| .+
T Consensus       117 g~~~~~~~v~~~~~~~~~l-p~~~~~~-~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~-g~~g~~~~~~a~~~G~~~  193 (345)
T cd08286         117 GTQAEYVRIPHADNSLYKL-PEGVDEE-AAVMLSDILPTGYECGVLNGKVKPGDTVAIVGA-GPVGLAALLTAQLYSPSK  193 (345)
T ss_pred             CeeeeEEEcccccCceEEC-CCCCCHH-HhhhccchhHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCe
Confidence            789999999998  89999 9885544 478899999999998777788999999999875 999999999999999 69


Q ss_pred             EEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeeccc
Q 026217           79 VVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQY  156 (241)
Q Consensus        79 v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~  156 (241)
                      |+++++++++.+.++ ++|++.++++++. ++...+.+.+++ ++|+++||+|. ..+..++++++++|+++.+|.... 
T Consensus       194 v~~~~~~~~~~~~~~-~~g~~~~v~~~~~-~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~-  270 (345)
T cd08286         194 IIMVDLDDNRLEVAK-KLGATHTVNSAKG-DAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGK-  270 (345)
T ss_pred             EEEEcCCHHHHHHHH-HhCCCceeccccc-cHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCC-
Confidence            999888888989998 9999999998876 777778777766 89999999985 577888899999999999986321 


Q ss_pred             CCCCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceec--cceeecCCcHHHHHHHhhcCC--Ccc
Q 026217          157 NNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYV--EDKAEGLESAPAALVGLFSGR--NVG  232 (241)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~l~~~~~a~~~l~~~~--~~g  232 (241)
                           ....+...++.+++++.+....      .+.+..+.+++.++.+++.  +.+++++++++++++.+....  ...
T Consensus       271 -----~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~  339 (345)
T cd08286         271 -----PVDLHLEKLWIKNITITTGLVD------TNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKAL  339 (345)
T ss_pred             -----CCCcCHHHHhhcCcEEEeecCc------hhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCee
Confidence                 1234455557889988875432      2467888899999988763  568899999999999998763  345


Q ss_pred             eEEEEe
Q 026217          233 KQVVEV  238 (241)
Q Consensus       233 k~vv~~  238 (241)
                      |+++++
T Consensus       340 k~~~~~  345 (345)
T cd08286         340 KVIIDF  345 (345)
T ss_pred             EEEEeC
Confidence            998864

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=99.95  E-value=7.6e-26  Score=184.28  Aligned_cols=218  Identities=21%  Similarity=0.238  Sum_probs=172.0

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCE-EE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-VV   80 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~-v~   80 (241)
                      |+|+||+.++.+.++++ |+++  +++.++++.++++||+++ ..++++++++|+|+|+ |++|++++|+|+.+|++ ++
T Consensus       116 g~~~~~~~v~~~~~~~l-P~~~--s~~~a~~~~~~~~a~~~~-~~~~~~~g~~VlI~g~-g~vg~~~~~la~~~G~~~v~  190 (341)
T cd08262         116 GGYAEYMLLSEALLLRV-PDGL--SMEDAALTEPLAVGLHAV-RRARLTPGEVALVIGC-GPIGLAVIAALKARGVGPIV  190 (341)
T ss_pred             CceeeeEEechHHeEEC-CCCC--CHHHhhhhhhHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEE
Confidence            78999999999999999 9994  443445778999999996 7789999999999975 99999999999999995 67


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCchhHHH---HHHHHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeecc
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDA---ALKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQ  155 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~---~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~  155 (241)
                      ++++++++.+.++ ++|++++++++.. +...   .+.....+ ++|+++|++|+ ..+..++++++++|+++.+|....
T Consensus       191 ~~~~~~~~~~~~~-~~g~~~~i~~~~~-~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~  268 (341)
T cd08262         191 ASDFSPERRALAL-AMGADIVVDPAAD-SPFAAWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCME  268 (341)
T ss_pred             EECCCHHHHHHHH-HcCCcEEEcCCCc-CHHHHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCC
Confidence            7777888899888 8999888887654 3222   23334444 89999999997 477889999999999999987431


Q ss_pred             cCCCCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceec--cceeecCCcHHHHHHHhhcCCCcce
Q 026217          156 YNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYV--EDKAEGLESAPAALVGLFSGRNVGK  233 (241)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~l~~~~~a~~~l~~~~~~gk  233 (241)
                      .   .   .......+.++.++.+.....     .+.+.++++++.+|.+.+.  +.+.+++++++++++.+.+++..||
T Consensus       269 ~---~---~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~k  337 (341)
T cd08262         269 S---D---NIEPALAIRKELTLQFSLGYT-----PEEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCK  337 (341)
T ss_pred             C---C---ccCHHHHhhcceEEEEEeccc-----HHHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceE
Confidence            1   1   122223345777776554333     4578889999999999763  4688999999999999999988899


Q ss_pred             EEEE
Q 026217          234 QVVE  237 (241)
Q Consensus       234 ~vv~  237 (241)
                      +|++
T Consensus       338 vvv~  341 (341)
T cd08262         338 ILVD  341 (341)
T ss_pred             EEeC
Confidence            9874

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=99.95  E-value=1e-25  Score=185.00  Aligned_cols=223  Identities=21%  Similarity=0.316  Sum_probs=183.4

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCE-EE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-VV   80 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~-v~   80 (241)
                      |+|++|+.++++.++++ |++++.. +++.+++++.|||.++.+..++.++++|+|+| .|++|++++++|+..|++ |+
T Consensus       135 g~~~~~~~~~~~~~~~l-p~~~~~~-~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g-~g~vG~a~i~lak~~G~~~Vi  211 (363)
T cd08279         135 GTFAEYTVVPEASVVKI-DDDIPLD-RAALLGCGVTTGVGAVVNTARVRPGDTVAVIG-CGGVGLNAIQGARIAGASRII  211 (363)
T ss_pred             ccceeeEEeccccEEEC-CCCCChH-HeehhcchhHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCcEE
Confidence            78999999999999999 9995555 47788999999999998888999999999996 599999999999999995 99


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCC-chhHHHHHHhhccCCEEEEEeeecccCC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNN  158 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~  158 (241)
                      ++++++++.+.++ ++|++++++++.. ++..+++...++ ++|+++|+++ ...+...+++++++|+++.+|....   
T Consensus       212 ~~~~~~~~~~~~~-~~g~~~vv~~~~~-~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~---  286 (363)
T cd08279         212 AVDPVPEKLELAR-RFGATHTVNASED-DAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPP---  286 (363)
T ss_pred             EEcCCHHHHHHHH-HhCCeEEeCCCCc-cHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCC---
Confidence            9998999999998 9999999988876 788888887755 8999999999 4678899999999999999986431   


Q ss_pred             CCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCcee--ccceeecCCcHHHHHHHhhcCCCcceEE
Q 026217          159 DKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQV  235 (241)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~l~~~~~~gk~v  235 (241)
                       ......+...+..++..+.+.....  ....+.++++++++.++.+++  .+.++|+++++++|++.+.+++..+.++
T Consensus       287 -~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~  362 (363)
T cd08279         287 -GETVSLPALELFLSEKRLQGSLYGS--ANPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI  362 (363)
T ss_pred             -CcccccCHHHHhhcCcEEEEEEecC--cCcHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence             1122344555566677767754422  122577888999999999886  3668899999999999999887765544

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=99.95  E-value=9.9e-26  Score=181.66  Aligned_cols=227  Identities=29%  Similarity=0.433  Sum_probs=188.8

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEE
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVV   80 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~   80 (241)
                      +|+|++|+.++++.++++ |++++.. ++++++.++.++|+++.+...+.++++++|+|++|++|++++++++..|++|+
T Consensus        91 ~g~~~~~~~~~~~~~~~~-p~~~~~~-~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~  168 (323)
T cd05276          91 GGGYAEYVVVPAGQLLPV-PEGLSLV-EAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGARVI  168 (323)
T ss_pred             CCceeEEEEcCHHHhccC-CCCCCHH-HHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCCEEE
Confidence            389999999999999999 9985444 47789999999999998888899999999999999999999999999999999


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNND  159 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~  159 (241)
                      ++++++++.+.++ ++|.+.+++.... ++...+.....+ ++|+++|++|+......+++++++|+++.+|..+..+  
T Consensus       169 ~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~~~~g~~i~~~~~~~~~--  244 (323)
T cd05276         169 ATAGSEEKLEACR-ALGADVAINYRTE-DFAEEVKEATGGRGVDVILDMVGGDYLARNLRALAPDGRLVLIGLLGGAK--  244 (323)
T ss_pred             EEcCCHHHHHHHH-HcCCCEEEeCCch-hHHHHHHHHhCCCCeEEEEECCchHHHHHHHHhhccCCEEEEEecCCCCC--
Confidence            9999989999997 8998888887776 777777777655 8999999999877888999999999999998743211  


Q ss_pred             CCCCccChHHHhhcceEEEEeecccc-----cchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceE
Q 026217          160 KPEGVHNLTCLISKRIRMEGFLVPDY-----FHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQ  234 (241)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~  234 (241)
                         ...+...++.+++++.+......     +....+.+.++.+++.++.+.+.+...|++++++++++.+.++...||+
T Consensus       245 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kv  321 (323)
T cd05276         245 ---AELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIRPVIDKVFPLEEAAEAHRRMESNEHIGKI  321 (323)
T ss_pred             ---CCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCccCCcceEEcHHHHHHHHHHHHhCCCcceE
Confidence               12334445578888888776542     2223456677888999999988788899999999999999988878888


Q ss_pred             EE
Q 026217          235 VV  236 (241)
Q Consensus       235 vv  236 (241)
                      ++
T Consensus       322 v~  323 (323)
T cd05276         322 VL  323 (323)
T ss_pred             eC
Confidence            74

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=99.95  E-value=1.8e-25  Score=181.70  Aligned_cols=223  Identities=27%  Similarity=0.393  Sum_probs=189.1

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVG   81 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~   81 (241)
                      |++++|+.++.+.++++ |++++.. +++.++.++.+||+++.+...+.++++++|+|+++++|++++++++..|++|++
T Consensus       119 g~~~~~~~~~~~~~~~~-p~~~~~~-~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~  196 (342)
T cd08266         119 GGYAEYVAVPARNLLPI-PDNLSFE-EAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIA  196 (342)
T ss_pred             cceeEEEEechHHceeC-CCCCCHH-HHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCEEEE
Confidence            67999999999999999 9885544 477888899999999988888999999999999899999999999999999999


Q ss_pred             EeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCCC
Q 026217           82 SAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDK  160 (241)
Q Consensus        82 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~  160 (241)
                      +++++++.+.++ .++.+.+++..+. ++...+.....+ ++|++++++|...+...+++++++|+++.+|.....    
T Consensus       197 ~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~i~~~g~~~~~~~~~~l~~~G~~v~~~~~~~~----  270 (342)
T cd08266         197 TAGSEDKLERAK-ELGADYVIDYRKE-DFVREVRELTGKRGVDVVVEHVGAATWEKSLKSLARGGRLVTCGATTGY----  270 (342)
T ss_pred             EeCCHHHHHHHH-HcCCCeEEecCCh-HHHHHHHHHhCCCCCcEEEECCcHHHHHHHHHHhhcCCEEEEEecCCCC----
Confidence            999999999988 8888777777765 677777776655 899999999988889999999999999999875421    


Q ss_pred             CCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEEEe
Q 026217          161 PEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  238 (241)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv~~  238 (241)
                       ....+....+.+++++.+.....     ...+..+++++.++.+++.+...|++++++++++.+.++...+|+++++
T Consensus       271 -~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  342 (342)
T cd08266         271 -EAPIDLRHVFWRQLSILGSTMGT-----KAELDEALRLVFRGKLKPVIDSVFPLEEAAEAHRRLESREQFGKIVLTP  342 (342)
T ss_pred             -CCCcCHHHHhhcceEEEEEecCC-----HHHHHHHHHHHHcCCcccceeeeEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence             11233445678888888877654     5578888999999999888888999999999999999888889999863

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=99.95  E-value=1.2e-25  Score=185.13  Aligned_cols=224  Identities=21%  Similarity=0.220  Sum_probs=179.5

Q ss_pred             CccceEEeecCC--ceeeecCCCCCcch--hhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC
Q 026217            2 TGWEEYSLVTAP--RLFKIQHTDMPLSY--YTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC   77 (241)
Q Consensus         2 G~~ae~~~v~~~--~~~~i~P~~~~~~~--~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~   77 (241)
                      |+|+||+.++..  .++++ |++++...  .+++++.+++|||+++ ..+.+.+|++|+|.| .|++|++++|+|+..|+
T Consensus       125 g~~a~y~~v~~~~~~~~~l-P~~~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g-~g~vg~~~~~~a~~~G~  201 (375)
T cd08282         125 GGQAEYLRVPYADFNLLKL-PDRDGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFG-AGPVGLMAAYSAILRGA  201 (375)
T ss_pred             CeeeeEEEeecccCcEEEC-CCCCChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCC
Confidence            789999999976  89999 99955542  2577888999999999 778899999999976 59999999999999998


Q ss_pred             -EEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCch------------hHHHHHHhhccC
Q 026217           78 -YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGK------------MLDAVLLNMRIQ  144 (241)
Q Consensus        78 -~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~------------~~~~~~~~l~~~  144 (241)
                       +|+++++++++.+.++ ++|+ ..+++++. ++...+.+.+++++|+++||+|+.            .+..++++++++
T Consensus       202 ~~vi~~~~~~~~~~~~~-~~g~-~~v~~~~~-~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~  278 (375)
T cd08282         202 SRVYVVDHVPERLDLAE-SIGA-IPIDFSDG-DPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPG  278 (375)
T ss_pred             CEEEEECCCHHHHHHHH-HcCC-eEeccCcc-cHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcC
Confidence             8999988999999999 9998 45677766 777788877666799999999975            378999999999


Q ss_pred             CEEEEEeeecccCCC-------CCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceec--cceeecC
Q 026217          145 GRITLCGMISQYNND-------KPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYV--EDKAEGL  215 (241)
Q Consensus       145 G~~v~~g~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~l  215 (241)
                      |+++.+|.....+..       .....++...++.++..+.+.....     ++.+..+++++.++.+++.  +.+.+++
T Consensus       279 g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~~l~~~~~~~~~~~l  353 (375)
T cd08282         279 GGIGIVGVYVAEDPGAGDAAAKQGELSFDFGLLWAKGLSFGTGQAPV-----KKYNRQLRDLILAGRAKPSFVVSHVISL  353 (375)
T ss_pred             cEEEEEeccCCcccccccccccCccccccHHHHHhcCcEEEEecCCc-----hhhHHHHHHHHHcCCCChHHcEEEEeeH
Confidence            999888764321110       0112234555666777666554322     5678888999999999873  7799999


Q ss_pred             CcHHHHHHHhhcCCCcceEEEE
Q 026217          216 ESAPAALVGLFSGRNVGKQVVE  237 (241)
Q Consensus       216 ~~~~~a~~~l~~~~~~gk~vv~  237 (241)
                      ++++++++.+.+++ .+|+|++
T Consensus       354 ~~~~~a~~~~~~~~-~~kvvv~  374 (375)
T cd08282         354 EDAPEAYARFDKRL-ETKVVIK  374 (375)
T ss_pred             HHHHHHHHHHhcCC-ceEEEeC
Confidence            99999999999988 8899985

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=99.95  E-value=1.1e-25  Score=183.96  Aligned_cols=216  Identities=21%  Similarity=0.244  Sum_probs=174.2

Q ss_pred             CccceEEeecCC-ceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EE
Q 026217            2 TGWEEYSLVTAP-RLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YV   79 (241)
Q Consensus         2 G~~ae~~~v~~~-~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v   79 (241)
                      |+|++|+.++++ .++++ |++++.. .++.+ .+++|+|+++ +...+.++++|+|.| +|++|++++|+|+++|+ .+
T Consensus       128 g~~~~~~~~~~~~~~~~l-P~~~~~~-~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~G~~~v  202 (350)
T cd08256         128 GGMAEYMRFPKEAIVHKV-PDDIPPE-DAILI-EPLACALHAV-DRANIKFDDVVVLAG-AGPLGLGMIGAARLKNPKKL  202 (350)
T ss_pred             CcceeeEEcccccceEEC-CCCCCHH-HHhhh-hHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEE
Confidence            789999999988 57899 9984443 35555 8999999998 778999999999955 69999999999999998 57


Q ss_pred             EEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeecccC
Q 026217           80 VGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYN  157 (241)
Q Consensus        80 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~  157 (241)
                      +++++++++.+.++ ++|++++++++.. ++.+++.+.+++ ++|+++|++|+ ..+..++++++++|+++.+|....  
T Consensus       203 ~~~~~~~~~~~~~~-~~g~~~v~~~~~~-~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--  278 (350)
T cd08256         203 IVLDLKDERLALAR-KFGADVVLNPPEV-DVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGD--  278 (350)
T ss_pred             EEEcCCHHHHHHHH-HcCCcEEecCCCc-CHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCC--
Confidence            77888888888888 9999888888776 788888888776 89999999995 678889999999999999986321  


Q ss_pred             CCCCCCccChHHH-hhcceEEEEeecccccchhHHHHHHHHHHHHcCCceec--cceeecCCcHHHHHHHhhcCCCcceE
Q 026217          158 NDKPEGVHNLTCL-ISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYV--EDKAEGLESAPAALVGLFSGRNVGKQ  234 (241)
Q Consensus       158 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~l~~~~~a~~~l~~~~~~gk~  234 (241)
                         . ........ ..+++++.++...      ...+.++++++.+|.+++.  +.+.|+++++.+|++.+++++..+|+
T Consensus       279 ---~-~~~~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kv  348 (350)
T cd08256         279 ---P-VTVDWSIIGDRKELDVLGSHLG------PYCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKV  348 (350)
T ss_pred             ---C-CccChhHhhcccccEEEEeccC------chhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEE
Confidence               1 11222222 3456667666543      2357788999999999874  67889999999999999998888898


Q ss_pred             EE
Q 026217          235 VV  236 (241)
Q Consensus       235 vv  236 (241)
                      ++
T Consensus       349 v~  350 (350)
T cd08256         349 VL  350 (350)
T ss_pred             eC
Confidence            74

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=99.95  E-value=1.5e-25  Score=182.71  Aligned_cols=218  Identities=20%  Similarity=0.225  Sum_probs=179.2

Q ss_pred             CccceEEeecCC--ceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-E
Q 026217            2 TGWEEYSLVTAP--RLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-Y   78 (241)
Q Consensus         2 G~~ae~~~v~~~--~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~   78 (241)
                      |+|++|+.++++  .++++ |++++.. ++++++.+++|||+++.. ..+.++++|+|+| +|++|++++|+|+.+|+ +
T Consensus       119 g~~~~~~~v~~~~~~~~~~-p~~l~~~-~a~~l~~~~~ta~~~~~~-~~~~~~~~vlI~g-~g~vg~~~~~~a~~~g~~~  194 (344)
T cd08284         119 GAQAEYVRVPFADGTLLKL-PDGLSDE-AALLLGDILPTGYFGAKR-AQVRPGDTVAVIG-CGPVGLCAVLSAQVLGAAR  194 (344)
T ss_pred             CceeEEEEcccccCceEEC-CCCCCHH-HhhhhcCchHHHHhhhHh-cCCccCCEEEEEC-CcHHHHHHHHHHHHcCCce
Confidence            789999999975  89999 9985444 478899999999999955 7899999999997 69999999999999997 8


Q ss_pred             EEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeeccc
Q 026217           79 VVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQY  156 (241)
Q Consensus        79 v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~  156 (241)
                      |+++++++++.+.++ ++|+. .++.+.. ++...+.+..++ ++|+++||+|+ ......+++++++|+++.+|.....
T Consensus       195 v~~~~~~~~~~~~~~-~~g~~-~~~~~~~-~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~  271 (344)
T cd08284         195 VFAVDPVPERLERAA-ALGAE-PINFEDA-EPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAE  271 (344)
T ss_pred             EEEEcCCHHHHHHHH-HhCCe-EEecCCc-CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCC
Confidence            999988888888888 89975 4666665 777888887765 89999999995 6788999999999999999875421


Q ss_pred             CCCCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCcee--ccceeecCCcHHHHHHHhhcCCCcceE
Q 026217          157 NNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQ  234 (241)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~l~~~~~~gk~  234 (241)
                           ....+....+.+++++.+...     ...+.+..+++++.++.+++  .+.+++++++++++++.+.+++. +|+
T Consensus       272 -----~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~  340 (344)
T cd08284         272 -----EFPFPGLDAYNKNLTLRFGRC-----PVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKV-LKV  340 (344)
T ss_pred             -----CccccHHHHhhcCcEEEEecC-----CcchhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCc-eEE
Confidence                 112344566778888775422     23667888999999999876  36688999999999999998877 899


Q ss_pred             EEE
Q 026217          235 VVE  237 (241)
Q Consensus       235 vv~  237 (241)
                      |++
T Consensus       341 Vi~  343 (344)
T cd08284         341 VLD  343 (344)
T ss_pred             Eec
Confidence            985

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=99.95  E-value=1.7e-25  Score=183.72  Aligned_cols=223  Identities=20%  Similarity=0.260  Sum_probs=178.3

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCE-EE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-VV   80 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~-v~   80 (241)
                      |+|++|+.++++.++++ |++++.. +++.+++++.+||+++.+.+.+++|++|+|+| +|++|++++|+|++.|++ |+
T Consensus       136 g~~a~~~~v~~~~~~~l-P~~~~~~-~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g-~g~vG~~a~~~a~~~G~~~v~  212 (365)
T cd05279         136 STFAEYTVVSEISLAKI-DPDAPLE-KVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFG-LGGVGLSVIMGCKAAGASRII  212 (365)
T ss_pred             ccccceEEecCCceEEC-CCCCCHH-HhhHhccchhHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEE
Confidence            58999999999999999 9995544 47788889999999988888999999999997 599999999999999995 77


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCc-hhHHHHHHHHCCCCccEEEeCCCc-hhHHHHHHhhc-cCCEEEEEeeecccC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEE-PDLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMR-IQGRITLCGMISQYN  157 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~-~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~-~~G~~v~~g~~~~~~  157 (241)
                      ++++++++.+.++ ++|++++++.++. .++.+.+++.+++++|+++|++|. ..+..++++++ ++|+++.+|....  
T Consensus       213 ~~~~~~~~~~~~~-~~g~~~~v~~~~~~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~--  289 (365)
T cd05279         213 AVDINKDKFEKAK-QLGATECINPRDQDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPS--  289 (365)
T ss_pred             EEeCCHHHHHHHH-HhCCCeecccccccchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCC--
Confidence            8887899999998 9999888877653 045566777665689999999985 78889999999 9999999986421  


Q ss_pred             CCCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCcee--ccceeecCCcHHHHHHHhhcCCCcceEE
Q 026217          158 NDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQV  235 (241)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~l~~~~~~gk~v  235 (241)
                        ......+...+ .++.++.|.....+.  ..+.+..+++++.++.+++  .+.++++++++.+|++.+.+++.. |++
T Consensus       290 --~~~~~~~~~~~-~~~~~l~g~~~~~~~--~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-~~~  363 (365)
T cd05279         290 --GTEATLDPNDL-LTGRTIKGTVFGGWK--SKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESI-RTI  363 (365)
T ss_pred             --CCceeeCHHHH-hcCCeEEEEeccCCc--hHhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCce-eee
Confidence              11123444444 566777776544321  2567888899999998875  467889999999999999877654 666


Q ss_pred             E
Q 026217          236 V  236 (241)
Q Consensus       236 v  236 (241)
                      |
T Consensus       364 ~  364 (365)
T cd05279         364 L  364 (365)
T ss_pred             e
Confidence            5

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=99.95  E-value=2.1e-25  Score=179.41  Aligned_cols=221  Identities=18%  Similarity=0.160  Sum_probs=180.4

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcC-chhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCE-
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILG-MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-   78 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~-~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~-   78 (241)
                      .|+|++|+.++++.++++ |+++  .  .++++ .+++++++++. ...++++++++|+| +|++|++++|+|+++|++ 
T Consensus        84 ~g~~~~~~~v~~~~~~~l-P~~~--~--~~~~~~~~~~~a~~~~~-~~~~~~~~~vlI~g-~g~vg~~~~~la~~~g~~~  156 (312)
T cd08269          84 GGAFAEYDLADADHAVPL-PSLL--D--GQAFPGEPLGCALNVFR-RGWIRAGKTVAVIG-AGFIGLLFLQLAAAAGARR  156 (312)
T ss_pred             CCcceeeEEEchhheEEC-CCch--h--hhHHhhhhHHHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcE
Confidence            378999999999999999 9984  3  33344 88899999985 78899999999997 599999999999999998 


Q ss_pred             EEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeeccc
Q 026217           79 VVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQY  156 (241)
Q Consensus        79 v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~  156 (241)
                      |+++++++++.++++ ++|++++++++.. ++.+.+.+.+++ ++|+++||+|+ ......+++++++|+++.+|.... 
T Consensus       157 v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g~~~~-  233 (312)
T cd08269         157 VIAIDRRPARLALAR-ELGATEVVTDDSE-AIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAERGRLVIFGYHQD-  233 (312)
T ss_pred             EEEECCCHHHHHHHH-HhCCceEecCCCc-CHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCC-
Confidence            999999888999888 9999888887766 788888888776 99999999985 578889999999999999986431 


Q ss_pred             CCCCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCcee--ccceeecCCcHHHHHHHhhcCCC-cce
Q 026217          157 NNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRN-VGK  233 (241)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~l~~~~~-~gk  233 (241)
                          .....+...+..++..+.++.... +....+.++.+++++.++.+++  .+.+.+++++++++++.+++++. .+|
T Consensus       234 ----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~  308 (312)
T cd08269         234 ----GPRPVPFQTWNWKGIDLINAVERD-PRIGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFIK  308 (312)
T ss_pred             ----CCcccCHHHHhhcCCEEEEecccC-ccchhhHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCceE
Confidence                112234445667777777665433 2233578899999999999987  35688999999999999999864 578


Q ss_pred             EEE
Q 026217          234 QVV  236 (241)
Q Consensus       234 ~vv  236 (241)
                      +++
T Consensus       309 ~~~  311 (312)
T cd08269         309 GVI  311 (312)
T ss_pred             EEe
Confidence            876

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=99.95  E-value=1.7e-25  Score=182.35  Aligned_cols=224  Identities=21%  Similarity=0.298  Sum_probs=180.5

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCE-EE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-VV   80 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~-v~   80 (241)
                      |+|++|+.++++.++++ |++++.. +++.+ ..++|||+++. ...+.++++|+|+| +|.+|++++|+|+.+|++ |+
T Consensus       114 g~~~~~~~~~~~~~~~l-P~~~~~~-~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~g-~g~~g~~~~~lA~~~G~~~v~  188 (343)
T cd08236         114 GAFAEYVSVPARNLIKI-PDHVDYE-EAAMI-EPAAVALHAVR-LAGITLGDTVVVIG-AGTIGLLAIQWLKILGAKRVI  188 (343)
T ss_pred             CcccceEEechHHeEEC-cCCCCHH-HHHhc-chHHHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEE
Confidence            78999999999999999 9995444 24454 67899999995 67899999999997 599999999999999996 99


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeecccCC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNN  158 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~  158 (241)
                      ++++++++.+.++ ++|++.++++++. . ..++....++ ++|+++||+|+ ..+..++++++++|+++.+|.....  
T Consensus       189 ~~~~~~~~~~~l~-~~g~~~~~~~~~~-~-~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--  263 (343)
T cd08236         189 AVDIDDEKLAVAR-ELGADDTINPKEE-D-VEKVRELTEGRGADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGD--  263 (343)
T ss_pred             EEcCCHHHHHHHH-HcCCCEEecCccc-c-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCC--
Confidence            9998999999998 8999889988876 6 7777777766 79999999985 6788999999999999999864311  


Q ss_pred             CCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCce--eccceeecCCcHHHHHHHhhc-CCCcceEE
Q 026217          159 DKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIV--YVEDKAEGLESAPAALVGLFS-GRNVGKQV  235 (241)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~l~~~~~a~~~l~~-~~~~gk~v  235 (241)
                       ......+...++.+++++.++..........+.++.+.+++.++.+.  +.+...+++++++++++.+.+ +...||+|
T Consensus       264 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v  342 (343)
T cd08236         264 -VTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVL  342 (343)
T ss_pred             -cccccCCHHHHHhcCcEEEEEeeccccccchhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEe
Confidence             11112234455678888888766433223456788899999999886  445688999999999999998 66678887


Q ss_pred             E
Q 026217          236 V  236 (241)
Q Consensus       236 v  236 (241)
                      +
T Consensus       343 ~  343 (343)
T cd08236         343 L  343 (343)
T ss_pred             C
Confidence            4

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=99.95  E-value=1.9e-25  Score=181.17  Aligned_cols=217  Identities=28%  Similarity=0.368  Sum_probs=177.6

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVG   81 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~   81 (241)
                      |+|++|++++...++++ |++++.. +++.+++++.|||+++.. ..+.++++++|+||+|++|++++++++..|++|++
T Consensus       116 g~~~~~~~v~~~~~~~i-p~~~~~~-~~~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~  192 (332)
T cd08259         116 GGFAEYVKVPERSLVKL-PDNVSDE-SAALAACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIA  192 (332)
T ss_pred             CeeeeEEEechhheEEC-CCCCCHH-HHhhhccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEE
Confidence            78999999999999999 9985544 478889999999999976 88999999999999999999999999999999999


Q ss_pred             EeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCCCC
Q 026217           82 SAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKP  161 (241)
Q Consensus        82 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~  161 (241)
                      +++++++.+.++ +++.+.+++..   ++.+.+....  ++|++++++|......++++++++|+++.+|.....     
T Consensus       193 ~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~--~~d~v~~~~g~~~~~~~~~~~~~~g~~v~~g~~~~~-----  261 (332)
T cd08259         193 VTRSPEKLKILK-ELGADYVIDGS---KFSEDVKKLG--GADVVIELVGSPTIEESLRSLNKGGRLVLIGNVTPD-----  261 (332)
T ss_pred             EeCCHHHHHHHH-HcCCcEEEecH---HHHHHHHhcc--CCCEEEECCChHHHHHHHHHhhcCCEEEEEcCCCCC-----
Confidence            999999989887 88887776543   3445555443  699999999988888999999999999999864321     


Q ss_pred             CCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEEE
Q 026217          162 EGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVE  237 (241)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv~  237 (241)
                      ....+......++..+.+....     ..+.++.+++++.+|.+++.+..+++++++++|++.+.+++..||++++
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~  332 (332)
T cd08259         262 PAPLRPGLLILKEIRIIGSISA-----TKADVEEALKLVKEGKIKPVIDRVVSLEDINEALEDLKSGKVVGRIVLK  332 (332)
T ss_pred             CcCCCHHHHHhCCcEEEEecCC-----CHHHHHHHHHHHHcCCCccceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence            1112223334566776665432     2667888999999999998888899999999999999998888999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=99.95  E-value=1.7e-25  Score=177.64  Aligned_cols=226  Identities=20%  Similarity=0.305  Sum_probs=185.9

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVG   81 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~   81 (241)
                      |+|+||+.++.+.++++ |++++.. +++.+++++.+||.++.+...+++|++++|+|++|++|++++|+++..|++|++
T Consensus        61 g~~~~~~~~~~~~~~~~-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~  138 (293)
T cd05195          61 GAFATHVRVDARLVVKI-PDSLSFE-EAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFA  138 (293)
T ss_pred             CcccceEEechhheEeC-CCCCCHH-HHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEE
Confidence            78999999999999999 9885444 377888999999999988889999999999999999999999999999999999


Q ss_pred             EeCCHHHHHHHHHHcC--CCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCC
Q 026217           82 SAGSKDKVDLLKNKFG--FDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNN  158 (241)
Q Consensus        82 ~~~~~~~~~~~~~~~g--~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~  158 (241)
                      +++++++.+.++ +.+  ++.++++... ++.+.++..+.+ ++|.++|++|+..+..++++++++|+++.+|.....+ 
T Consensus       139 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~-  215 (293)
T cd05195         139 TVGSEEKREFLR-ELGGPVDHIFSSRDL-SFADGILRATGGRGVDVVLNSLSGELLRASWRCLAPFGRFVEIGKRDILS-  215 (293)
T ss_pred             EeCCHHHHHHHH-HhCCCcceEeecCch-hHHHHHHHHhCCCCceEEEeCCCchHHHHHHHhcccCceEEEeecccccc-
Confidence            999989999998 777  6778887776 788888888766 8999999999888999999999999999998743211 


Q ss_pred             CCCCCccChHHHhhcceEEEEeecccc----cchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceE
Q 026217          159 DKPEGVHNLTCLISKRIRMEGFLVPDY----FHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQ  234 (241)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~  234 (241)
                         .... ....+.+++.+........    +....+.+..+.+++.++.+++.+...++++++.++++.+.+++..+|+
T Consensus       216 ---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~i  291 (293)
T cd05195         216 ---NSKL-GMRPFLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLKPLPPTVVPSASEIDAFRLMQSGKHIGKV  291 (293)
T ss_pred             ---CCcc-chhhhccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcccCCCeeechhhHHHHHHHHhcCCCCcee
Confidence               0011 1233456677776655432    2333557888999999999998888889999999999999998888888


Q ss_pred             EE
Q 026217          235 VV  236 (241)
Q Consensus       235 vv  236 (241)
                      ++
T Consensus       292 vv  293 (293)
T cd05195         292 VL  293 (293)
T ss_pred             cC
Confidence            74

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=99.95  E-value=2.5e-25  Score=179.93  Aligned_cols=225  Identities=20%  Similarity=0.257  Sum_probs=179.0

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHH--hcCCC-CCcEEEEEcCCchHHHHHHHHHHHcCCE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFE--VCSPK-QGEYVFVSAASGAVGQLVGQFAKLVGCY   78 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~--~~~~~-~~~~vlI~ga~g~~G~~avqla~~~g~~   78 (241)
                      |+|++|+.++.+.++++ |++++.. +++.++.++++|+.++..  ..... ++++++|+|++|++|++++|+|+.+|++
T Consensus        96 g~~~~~~~v~~~~~~~l-p~~~~~~-~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~~  173 (324)
T cd08288          96 GGYAQRARVKADWLVPL-PEGLSAR-QAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGYE  173 (324)
T ss_pred             CcceeEEEEchHHeeeC-CCCCCHH-HHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCe
Confidence            78999999999999999 9985444 378889999999877641  13444 6789999999999999999999999999


Q ss_pred             EEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCC
Q 026217           79 VVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNN  158 (241)
Q Consensus        79 v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~  158 (241)
                      |++++.++++.+.++ ++|+++++++++. .  ..++....+++|.++|++++......+..++.+|+++.+|.....  
T Consensus       174 vi~~~~~~~~~~~~~-~~g~~~~~~~~~~-~--~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~G~~~~~--  247 (324)
T cd08288         174 VVASTGRPEEADYLR-SLGASEIIDRAEL-S--EPGRPLQKERWAGAVDTVGGHTLANVLAQTRYGGAVAACGLAGGA--  247 (324)
T ss_pred             EEEEeCCHHHHHHHH-hcCCCEEEEcchh-h--HhhhhhccCcccEEEECCcHHHHHHHHHHhcCCCEEEEEEecCCC--
Confidence            999999999999998 9999988887653 2  355555555789999999986777888888999999999874211  


Q ss_pred             CCCCCccChHHHhhcceEEEEeecccc-cchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEEE
Q 026217          159 DKPEGVHNLTCLISKRIRMEGFLVPDY-FHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVE  237 (241)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv~  237 (241)
                        + ...+...++.+++++.+...... .+...+.+..+.+++.++.+++ +...++++++.++++.+.+++..||++++
T Consensus       248 --~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~a~~~~~~~~~~~~vvv~  323 (324)
T cd08288         248 --D-LPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLARDLDPALLEA-LTREIPLADVPDAAEAILAGQVRGRVVVD  323 (324)
T ss_pred             --C-CCcchhhhhccccEEEEEEeecccchhhHHHHHHHHHHHhcCCccc-cceeecHHHHHHHHHHHhcCCccCeEEEe
Confidence              1 11233344578999998764332 2334567888888998998876 46889999999999999999999999986


Q ss_pred             e
Q 026217          238 V  238 (241)
Q Consensus       238 ~  238 (241)
                      +
T Consensus       324 ~  324 (324)
T cd08288         324 V  324 (324)
T ss_pred             C
Confidence            4

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=99.95  E-value=2.6e-25  Score=182.97  Aligned_cols=225  Identities=19%  Similarity=0.210  Sum_probs=174.2

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVV   80 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~   80 (241)
                      |+|+||++++++.++++ |++++.. +++.+++++.|||+++...+.++++++|+|+| +|++|++++++|+..|+ +|+
T Consensus       143 G~~~e~~~v~~~~~~~l-P~~l~~~-~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G-~g~vG~~~~~~a~~~G~~~Vi  219 (373)
T cd08299         143 STFSEYTVVDEIAVAKI-DAAAPLE-KVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFG-LGGVGLSAIMGCKAAGASRII  219 (373)
T ss_pred             CcccceEEecccceeeC-CCCCChH-HhheeccchHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEE
Confidence            68999999999999999 9995544 47788889999999987888999999999997 59999999999999999 899


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCc-hhHHHHHHHHCCCCccEEEeCCCc-hhHHHHHHhh-ccCCEEEEEeeecccC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEE-PDLDAALKRYFPEGINIYFENVGG-KMLDAVLLNM-RIQGRITLCGMISQYN  157 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~-~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l-~~~G~~v~~g~~~~~~  157 (241)
                      ++++++++++.++ ++|++++++..+. .++...+.+.+++++|+++||+|+ ..+..++..+ +++|+++.+|..... 
T Consensus       220 ~~~~~~~~~~~a~-~lGa~~~i~~~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~-  297 (373)
T cd08299         220 AVDINKDKFAKAK-ELGATECINPQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSS-  297 (373)
T ss_pred             EEcCCHHHHHHHH-HcCCceEecccccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCC-
Confidence            9999999999998 8999988887653 036677777666689999999995 5667766655 579999999874321 


Q ss_pred             CCCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCce--eccceeecCCcHHHHHHHhhcCCCcceEE
Q 026217          158 NDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIV--YVEDKAEGLESAPAALVGLFSGRNVGKQV  235 (241)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~l~~~~~a~~~l~~~~~~gk~v  235 (241)
                         ........ .+.++.++.++....+..  .+.+.++++.+.++.++  +.+.++|+++++.+|++.+.+++. .|++
T Consensus       298 ---~~~~~~~~-~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~-~k~~  370 (373)
T cd08299         298 ---QNLSINPM-LLLTGRTWKGAVFGGWKS--KDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKS-IRTV  370 (373)
T ss_pred             ---ceeecCHH-HHhcCCeEEEEEecCCcc--HHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCc-ceEE
Confidence               11112222 345677888877654321  34555666667666544  456789999999999999987765 4877


Q ss_pred             EEe
Q 026217          236 VEV  238 (241)
Q Consensus       236 v~~  238 (241)
                      +++
T Consensus       371 ~~~  373 (373)
T cd08299         371 LTF  373 (373)
T ss_pred             EeC
Confidence            753

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=99.95  E-value=2.8e-25  Score=179.34  Aligned_cols=229  Identities=27%  Similarity=0.391  Sum_probs=191.3

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEE
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVV   80 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~   80 (241)
                      +|++++|+.++...++++ |++++.. ++++++.++.|||+++.+...+.++++++|+|++|++|++++++++..|++|+
T Consensus        91 ~~~~~~~~~~~~~~~~~i-p~~~~~~-~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~  168 (325)
T TIGR02824        91 GGGYAEYVAVPAGQVLPV-PEGLSLV-EAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGARVF  168 (325)
T ss_pred             CCcceeEEEecHHHcEeC-CCCCCHH-HHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCCEEE
Confidence            378999999999999999 9985444 47789999999999988888999999999999999999999999999999999


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNND  159 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~  159 (241)
                      ++++++++.+.++ ++|.+.+++.... ++...+....++ ++|++++++|+.....++++++++|+++.+|.....   
T Consensus       169 ~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~---  243 (325)
T TIGR02824       169 TTAGSDEKCAACE-ALGADIAINYREE-DFVEVVKAETGGKGVDVILDIVGGSYLNRNIKALALDGRIVQIGFQGGR---  243 (325)
T ss_pred             EEeCCHHHHHHHH-HcCCcEEEecCch-hHHHHHHHHcCCCCeEEEEECCchHHHHHHHHhhccCcEEEEEecCCCC---
Confidence            9999999999887 8998888777766 777788877765 899999999988888999999999999999874321   


Q ss_pred             CCCCccChHHHhhcceEEEEeecccc-----cchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceE
Q 026217          160 KPEGVHNLTCLISKRIRMEGFLVPDY-----FHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQ  234 (241)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~  234 (241)
                       . ...+...++.+++++.+......     +......+.++++++.++.+++.+...++++++.++++.+.++...||+
T Consensus       244 -~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (325)
T TIGR02824       244 -K-AELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRPVIDKVFPLEDAAQAHALMESGDHIGKI  321 (325)
T ss_pred             -c-CCCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCcccCccccEEeHHHHHHHHHHHHhCCCcceE
Confidence             1 12344455588999998886542     1223456677888999999987777889999999999999988888899


Q ss_pred             EEEe
Q 026217          235 VVEV  238 (241)
Q Consensus       235 vv~~  238 (241)
                      ++++
T Consensus       322 v~~~  325 (325)
T TIGR02824       322 VLTV  325 (325)
T ss_pred             EEeC
Confidence            9864

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>smart00829 PKS_ER Enoylreductase

Probab=99.95  E-value=1.5e-25  Score=177.83  Aligned_cols=226  Identities=20%  Similarity=0.318  Sum_probs=184.4

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVG   81 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~   81 (241)
                      |+|++|+.++.+.++++ |++++.. +++++++++.++|+++.+...+.+|++|+|+|++|++|++++++++..|++|++
T Consensus        57 g~~~~~~~~~~~~~~~~-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~  134 (288)
T smart00829       57 GSFATYVRTDARLVVPI-PDGLSFE-EAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHLGAEVFA  134 (288)
T ss_pred             CceeeEEEccHHHeEEC-CCCCCHH-HHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEE
Confidence            78999999999999999 9985544 377888999999999978888999999999999999999999999999999999


Q ss_pred             EeCCHHHHHHHHHHcCC--CeeecCCCchhHHHHHHHHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCC
Q 026217           82 SAGSKDKVDLLKNKFGF--DEAFNYKEEPDLDAALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNN  158 (241)
Q Consensus        82 ~~~~~~~~~~~~~~~g~--~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~  158 (241)
                      +++++++.+.++ ++|+  +.++++++. ++.+.+....++ ++|.++|++++......+++++++|+++.+|.....  
T Consensus       135 ~~~~~~~~~~~~-~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~--  210 (288)
T smart00829      135 TAGSPEKRDFLR-ELGIPDDHIFSSRDL-SFADEILRATGGRGVDVVLNSLAGEFLDASLRCLAPGGRFVEIGKRDIR--  210 (288)
T ss_pred             EeCCHHHHHHHH-HcCCChhheeeCCCc-cHHHHHHHHhCCCCcEEEEeCCCHHHHHHHHHhccCCcEEEEEcCcCCc--
Confidence            999999999998 9998  678888776 787888877766 899999999988888899999999999999864311  


Q ss_pred             CCCCCccChHHHhhcceEEEEeecccc---cchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEE
Q 026217          159 DKPEGVHNLTCLISKRIRMEGFLVPDY---FHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQV  235 (241)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~v  235 (241)
                        .....+. ..+.+++.+.+......   +....+.+..+.+++.++.+.+...+.|+++++.++++.+..++..+|++
T Consensus       211 --~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv  287 (288)
T smart00829      211 --DNSQLGM-APFRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPLPVTVFPISDVEDAFRYMQQGKHIGKVV  287 (288)
T ss_pred             --cccccch-hhhcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCcCceEEcHHHHHHHHHHHhcCCCcceEe
Confidence              0111222 22466777766654321   22234567788899999998876668899999999999999987778876


Q ss_pred             E
Q 026217          236 V  236 (241)
Q Consensus       236 v  236 (241)
                      +
T Consensus       288 v  288 (288)
T smart00829      288 L  288 (288)
T ss_pred             C
Confidence            4

Enoylreductase in Polyketide synthases.

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=99.95  E-value=1.8e-25  Score=184.67  Aligned_cols=220  Identities=23%  Similarity=0.263  Sum_probs=176.9

Q ss_pred             CccceEEeecCCceeeecCCCCC-----cchhhhhcCchhHHHHHHHHHh-cCCCCCcEEEEEcCCchHHHHHHHHHHHc
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMP-----LSYYTGILGMPGMTAYAGFFEV-CSPKQGEYVFVSAASGAVGQLVGQFAKLV   75 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~-----~~~~~a~l~~~~~ta~~~l~~~-~~~~~~~~vlI~ga~g~~G~~avqla~~~   75 (241)
                      |+|++|+.++++.++++ |++++     +..++++++.++++||+++... .++++|++|+|+| +|++|++++|+|+..
T Consensus       149 g~~~~~v~v~~~~~~~l-P~~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g-~g~vG~~ai~lA~~~  226 (384)
T cd08265         149 GAFAEYIAVNARYAWEI-NELREIYSEDKAFEAGALVEPTSVAYNGLFIRGGGFRPGAYVVVYG-AGPIGLAAIALAKAA  226 (384)
T ss_pred             CcceeeEEechHHeEEC-CccccccccCCCHHHhhhhhHHHHHHHHHHhhcCCCCCCCEEEEEC-CCHHHHHHHHHHHHc
Confidence            78999999999999999 87532     3434778889999999999766 6899999999996 599999999999999


Q ss_pred             CC-EEEEEeCCHHHHHHHHHHcCCCeeecCCC---chhHHHHHHHHCCC-CccEEEeCCCc--hhHHHHHHhhccCCEEE
Q 026217           76 GC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKE---EPDLDAALKRYFPE-GINIYFENVGG--KMLDAVLLNMRIQGRIT  148 (241)
Q Consensus        76 g~-~v~~~~~~~~~~~~~~~~~g~~~~i~~~~---~~~~~~~i~~~~~~-~~d~v~d~~g~--~~~~~~~~~l~~~G~~v  148 (241)
                      |+ +|+++++++++.+.++ ++|+++++++++   . ++...+.+.+++ ++|+++|++|+  ..+..++++++++|+++
T Consensus       227 G~~~vi~~~~~~~~~~~~~-~~g~~~~v~~~~~~~~-~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v  304 (384)
T cd08265         227 GASKVIAFEISEERRNLAK-EMGADYVFNPTKMRDC-LSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAINGKIV  304 (384)
T ss_pred             CCCEEEEEcCCHHHHHHHH-HcCCCEEEcccccccc-cHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcCCEEE
Confidence            99 8999998888888888 999988887763   2 567778888876 89999999995  36788999999999999


Q ss_pred             EEeeecccCCCCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceec--cceeecCCcHHHHHHHhh
Q 026217          149 LCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYV--EDKAEGLESAPAALVGLF  226 (241)
Q Consensus       149 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~l~~~~~a~~~l~  226 (241)
                      .+|....      ....+......+..++.+.....    ....+.++++++.++.+++.  +.+.|+++++.+|++.+.
T Consensus       305 ~~g~~~~------~~~~~~~~~~~~~~~l~~~~~~~----~~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~  374 (384)
T cd08265         305 YIGRAAT------TVPLHLEVLQVRRAQIVGAQGHS----GHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAAS  374 (384)
T ss_pred             EECCCCC------CCcccHHHHhhCceEEEEeeccC----CcchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHh
Confidence            9986431      11223345556666777765322    24468889999999999863  567899999999999976


Q ss_pred             cCCCcceEEE
Q 026217          227 SGRNVGKQVV  236 (241)
Q Consensus       227 ~~~~~gk~vv  236 (241)
                      ++ ..||+|+
T Consensus       375 ~~-~~~kvvv  383 (384)
T cd08265         375 ER-TDGKITI  383 (384)
T ss_pred             cC-CCceEEe
Confidence            65 5688886

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.95  E-value=5.1e-25  Score=178.02  Aligned_cols=228  Identities=24%  Similarity=0.361  Sum_probs=190.9

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVG   81 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~   81 (241)
                      |++++|+.++.+.++++ |++++.. ++++++.++.+||+++.....+.++++++|+|++|++|++++++++..|+++++
T Consensus        97 g~~~~~~~~~~~~~~~~-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~  174 (328)
T cd08268          97 GTYAEYALVPAAAVVKL-PDGLSFV-EAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGATVIA  174 (328)
T ss_pred             ccceEEEEechHhcEeC-CCCCCHH-HHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEE
Confidence            78999999999999999 9985443 378899999999999988888999999999999999999999999999999999


Q ss_pred             EeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCCC
Q 026217           82 SAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDK  160 (241)
Q Consensus        82 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~  160 (241)
                      +++++++.+.++ ++|.+.+++.+.. ++...+.....+ ++|++++++++.....++++++++|+++.+|....     
T Consensus       175 ~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~-----  247 (328)
T cd08268         175 TTRTSEKRDALL-ALGAAHVIVTDEE-DLVAEVLRITGGKGVDVVFDPVGGPQFAKLADALAPGGTLVVYGALSG-----  247 (328)
T ss_pred             EcCCHHHHHHHH-HcCCCEEEecCCc-cHHHHHHHHhCCCCceEEEECCchHhHHHHHHhhccCCEEEEEEeCCC-----
Confidence            999999999998 8998888887776 777777777665 89999999999888899999999999999987432     


Q ss_pred             CCCccChHHHhhcceEEEEeecccc---cchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEEE
Q 026217          161 PEGVHNLTCLISKRIRMEGFLVPDY---FHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVE  237 (241)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv~  237 (241)
                      .....+....+.+++.+.+......   ++.....+..+.+++.++.+.+.+...|+++++.++++.+.+++..+|++++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~  327 (328)
T cd08268         248 EPTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDGLASGALKPVVDRVFPFDDIVEAHRYLESGQQIGKIVVT  327 (328)
T ss_pred             CCCCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHHHHHCCCCcCCcccEEcHHHHHHHHHHHHcCCCCceEEEe
Confidence            1112333346888998888775432   3344566777778888898888777889999999999999988888899986


Q ss_pred             e
Q 026217          238 V  238 (241)
Q Consensus       238 ~  238 (241)
                      +
T Consensus       328 ~  328 (328)
T cd08268         328 P  328 (328)
T ss_pred             C
Confidence            4

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=99.95  E-value=2.8e-25  Score=180.52  Aligned_cols=223  Identities=22%  Similarity=0.234  Sum_probs=181.5

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCC-----CcEEEEEcCCchHHHHHHHHHHHcC
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQ-----GEYVFVSAASGAVGQLVGQFAKLVG   76 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~-----~~~vlI~ga~g~~G~~avqla~~~g   76 (241)
                      |+|++|+.++.+.++++ |++++.. +++.++..++|||+++.+.+.+.+     +++|+|+|++|++|++++|+|+.+|
T Consensus        97 g~~~~~~~v~~~~~~~i-p~~~~~~-~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G  174 (336)
T cd08252          97 GSNAEYQLVDERIVGHK-PKSLSFA-EAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLT  174 (336)
T ss_pred             ccceEEEEEchHHeeeC-CCCCCHH-HhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcC
Confidence            78999999999999999 9885544 377889999999999888788887     9999999999999999999999999


Q ss_pred             -CEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeec
Q 026217           77 -CYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMIS  154 (241)
Q Consensus        77 -~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~  154 (241)
                       ++|+++++++++.+.++ ++|++++++++.  ++...++...++++|+++||+|+ ..+..++++++++|+++.+|...
T Consensus       175 ~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~--~~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~  251 (336)
T cd08252         175 GLTVIATASRPESIAWVK-ELGADHVINHHQ--DLAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQGHICLIVDPQ  251 (336)
T ss_pred             CcEEEEEcCChhhHHHHH-hcCCcEEEeCCc--cHHHHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCCCEEEEecCCC
Confidence             89999999999999998 899988888764  56666665443489999999995 78899999999999999998631


Q ss_pred             ccCCCCCCCccChHHHhhcceEEEEeecccc-------cchhHHHHHHHHHHHHcCCceeccc---eeecCCcHHHHHHH
Q 026217          155 QYNNDKPEGVHNLTCLISKRIRMEGFLVPDY-------FHLYPKFLEMMIPRIKEGKIVYVED---KAEGLESAPAALVG  224 (241)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~g~~~~~~~---~~~~l~~~~~a~~~  224 (241)
                              ...+...++.+++++.+......       +....+.+..+.+++.+|.+++.+.   ..+++++++++++.
T Consensus       252 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~  323 (336)
T cd08252         252 --------EPLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLTETLGPINAENLREAHAL  323 (336)
T ss_pred             --------CcccchhhhcccceEEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecceeeeecCCCHHHHHHHHHH
Confidence                    12233334467788777554321       1133467888999999999987643   34799999999999


Q ss_pred             hhcCCCcceEEEE
Q 026217          225 LFSGRNVGKQVVE  237 (241)
Q Consensus       225 l~~~~~~gk~vv~  237 (241)
                      +.++...+|++++
T Consensus       324 ~~~~~~~~~vv~~  336 (336)
T cd08252         324 LESGKTIGKIVLE  336 (336)
T ss_pred             HHcCCccceEEeC
Confidence            9998888898864

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=99.94  E-value=4.6e-25  Score=179.69  Aligned_cols=219  Identities=21%  Similarity=0.289  Sum_probs=174.7

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVV   80 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~   80 (241)
                      |+|++|++++.+.++++ |++++..  .+++..++.++++++..  ...+|++|+|.| +|++|++++|+|+++|+ +|+
T Consensus       119 g~~~~~~~v~~~~~~~i-P~~l~~~--~~~~~~~~~~~~~~~~~--~~~~g~~vlV~~-~g~vg~~~~~la~~~G~~~v~  192 (341)
T PRK05396        119 GAFAEYLVIPAFNVWKI-PDDIPDD--LAAIFDPFGNAVHTALS--FDLVGEDVLITG-AGPIGIMAAAVAKHVGARHVV  192 (341)
T ss_pred             CcceeeEEechHHeEEC-cCCCCHH--HhHhhhHHHHHHHHHHc--CCCCCCeEEEEC-CCHHHHHHHHHHHHcCCCEEE
Confidence            78999999999999999 9994443  34455677777776633  346899999987 59999999999999999 688


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeecccCC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNN  158 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~  158 (241)
                      ++++++++.++++ ++|+++++++++. ++.+.++..+++ ++|++|||.|+ ..+..++++++++|+++.+|..+.   
T Consensus       193 ~~~~~~~~~~~~~-~lg~~~~~~~~~~-~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~---  267 (341)
T PRK05396        193 ITDVNEYRLELAR-KMGATRAVNVAKE-DLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPG---  267 (341)
T ss_pred             EEcCCHHHHHHHH-HhCCcEEecCccc-cHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC---
Confidence            8888888999888 8999999998877 788888888765 89999999985 678899999999999999987431   


Q ss_pred             CCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcC-CceeccceeecCCcHHHHHHHhhcCCCcceEEEE
Q 026217          159 DKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEG-KIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVE  237 (241)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv~  237 (241)
                        . .......+..++.++.++....    ..+.+..+++++.++ .+.+.+.+.++++++.+|++.+.+++ .||++++
T Consensus       268 --~-~~~~~~~~~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~-~gk~vv~  339 (341)
T PRK05396        268 --D-MAIDWNKVIFKGLTIKGIYGRE----MFETWYKMSALLQSGLDLSPIITHRFPIDDFQKGFEAMRSGQ-SGKVILD  339 (341)
T ss_pred             --C-CcccHHHHhhcceEEEEEEccC----ccchHHHHHHHHHcCCChhHheEEEEeHHHHHHHHHHHhcCC-CceEEEe
Confidence              1 1122456677888887765322    134456677888888 45566778899999999999998877 7999998


Q ss_pred             ec
Q 026217          238 VA  239 (241)
Q Consensus       238 ~~  239 (241)
                      ++
T Consensus       340 ~~  341 (341)
T PRK05396        340 WD  341 (341)
T ss_pred             cC
Confidence            74

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=99.94  E-value=5.8e-25  Score=179.03  Aligned_cols=219  Identities=21%  Similarity=0.295  Sum_probs=176.4

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCE-EE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-VV   80 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~-v~   80 (241)
                      |+|++|++++++.++++ |++++.  +.++++.++.+|++++  ...+.+|++++|.| +|++|++++|+|+.+|++ |+
T Consensus       117 g~~~~~~~~~~~~~~~l-p~~~~~--~~a~~~~~~~~a~~~~--~~~~~~g~~vlI~~-~g~vg~~a~~la~~~G~~~v~  190 (340)
T TIGR00692       117 GCFAEYAVVPAQNIWKN-PKSIPP--EYATIQEPLGNAVHTV--LAGPISGKSVLVTG-AGPIGLMAIAVAKASGAYPVI  190 (340)
T ss_pred             CcceeEEEeehHHcEEC-cCCCCh--HhhhhcchHHHHHHHH--HccCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEE
Confidence            78999999999999999 998543  4567888999999887  34578999999976 599999999999999996 88


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeecccCC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNN  158 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~  158 (241)
                      ++.+++.+.+.++ ++|++.+++++.. ++.+.+.+..++ ++|+++||+|+ ..+...+++++++|+++.+|....   
T Consensus       191 ~~~~~~~~~~~~~-~~g~~~~v~~~~~-~~~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~---  265 (340)
T TIGR00692       191 VSDPNEYRLELAK-KMGATYVVNPFKE-DVVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPGGRVSLLGLPPG---  265 (340)
T ss_pred             EECCCHHHHHHHH-HhCCcEEEccccc-CHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCCCEEEEEccCCC---
Confidence            8887888888888 8999888888776 888888887765 89999999885 678889999999999999986421   


Q ss_pred             CCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCce--eccceeecCCcHHHHHHHhhcCCCcceEEE
Q 026217          159 DKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIV--YVEDKAEGLESAPAALVGLFSGRNVGKQVV  236 (241)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv  236 (241)
                        .........++.+++.+.+....    ...+.+.++++++.+|.++  +.+.+.++++++.++++.+.+++. ||+|+
T Consensus       266 --~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~-gkvvv  338 (340)
T TIGR00692       266 --KVTIDFTNKVIFKGLTIYGITGR----HMFETWYTVSRLIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQT-GKVIL  338 (340)
T ss_pred             --CcccchhhhhhhcceEEEEEecC----CchhhHHHHHHHHHcCCCChHHheeeeeeHHHHHHHHHHHhcCCC-ceEEE
Confidence              11111222455667777665421    2245678899999999987  456788999999999999998875 99998


Q ss_pred             Ee
Q 026217          237 EV  238 (241)
Q Consensus       237 ~~  238 (241)
                      ++
T Consensus       339 ~~  340 (340)
T TIGR00692       339 SL  340 (340)
T ss_pred             eC
Confidence            74

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=99.94  E-value=9.6e-25  Score=175.99  Aligned_cols=227  Identities=27%  Similarity=0.388  Sum_probs=189.7

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVG   81 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~   81 (241)
                      |++++|+.++.+.++++ |++++.. ++++++.++.+|++++.+...+.++++++|+|++|++|++++++++..|++|++
T Consensus        92 ~~~~~~~~~~~~~~~~i-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~  169 (323)
T cd08241          92 GGFAEEVVVPAAAVFPL-PDGLSFE-EAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGARVIA  169 (323)
T ss_pred             ceeEEEEEcCHHHceeC-CCCCCHH-HHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCCEEEE
Confidence            78999999999999999 9885544 367789999999999987788999999999999999999999999999999999


Q ss_pred             EeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCCC
Q 026217           82 SAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDK  160 (241)
Q Consensus        82 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~  160 (241)
                      +++++++.+.++ ++|.+.+++.... ++.+.+...+++ ++|.++||+|+.....++++++++|+++.+|....     
T Consensus       170 ~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~i~~~~~~~~~d~v~~~~g~~~~~~~~~~~~~~g~~v~~~~~~~-----  242 (323)
T cd08241         170 AASSEEKLALAR-ALGADHVIDYRDP-DLRERVKALTGGRGVDVVYDPVGGDVFEASLRSLAWGGRLLVIGFASG-----  242 (323)
T ss_pred             EeCCHHHHHHHH-HcCCceeeecCCc-cHHHHHHHHcCCCCcEEEEECccHHHHHHHHHhhccCCEEEEEccCCC-----
Confidence            999999999998 8998888887776 788888888776 89999999998888889999999999999986321     


Q ss_pred             CCCccChHHHhhcceEEEEeecccc----cchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEE
Q 026217          161 PEGVHNLTCLISKRIRMEGFLVPDY----FHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVV  236 (241)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv  236 (241)
                      .....+....+.+++++.+.....+    +....+.+..+++++.++.+++.+...|+++++.++++.+.++...+|+++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvv  322 (323)
T cd08241         243 EIPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIRPHVSAVFPLEQAAEALRALADRKATGKVVL  322 (323)
T ss_pred             CcCcCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHHHHHHHCCCcccccceEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence            1111223345678888888776543    222346788899999999998888889999999999999998887888886


Q ss_pred             E
Q 026217          237 E  237 (241)
Q Consensus       237 ~  237 (241)
                      +
T Consensus       323 ~  323 (323)
T cd08241         323 T  323 (323)
T ss_pred             C
Confidence            3

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd05281 TDH Threonine dehydrogenase

Probab=99.94  E-value=7.1e-25  Score=178.56  Aligned_cols=218  Identities=23%  Similarity=0.309  Sum_probs=175.2

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVV   80 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~   80 (241)
                      |+|++|++++.+.++++ |++  ++.++++++.++.++++++.  ....++++|+|+| +|++|++++|+|+..|+ +|+
T Consensus       119 g~~~~~v~v~~~~~~~l-P~~--~~~~~a~~~~~~~~a~~~~~--~~~~~g~~vlV~g-~g~vg~~~~~la~~~G~~~v~  192 (341)
T cd05281         119 GCFAEYVVVPEENLWKN-DKD--IPPEIASIQEPLGNAVHTVL--AGDVSGKSVLITG-CGPIGLMAIAVAKAAGASLVI  192 (341)
T ss_pred             CcceEEEEechHHcEEC-cCC--CCHHHhhhhhHHHHHHHHHH--hcCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEE
Confidence            78999999999999999 998  44446688888999998874  4568999999987 59999999999999999 799


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeecccCC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNN  158 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~  158 (241)
                      ++++++++.+.++ ++|++++++++.. ++. .+.+..++ ++|++|||+|+ .....++++++++|+++.+|....   
T Consensus       193 ~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~---  266 (341)
T cd05281         193 ASDPNPYRLELAK-KMGADVVINPREE-DVV-EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPG---  266 (341)
T ss_pred             EECCCHHHHHHHH-HhCcceeeCcccc-cHH-HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCC---
Confidence            9988888898888 8999888888776 777 78887776 99999999986 577899999999999999886432   


Q ss_pred             CCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCce--eccceeecCCcHHHHHHHhhcCCCcceEEE
Q 026217          159 DKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIV--YVEDKAEGLESAPAALVGLFSGRNVGKQVV  236 (241)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv  236 (241)
                        ............++..+.+.....    ..+.+..+.+++.+|.+.  +.+...+++++++++++.+.+++ .||+|+
T Consensus       267 --~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~gk~vv  339 (341)
T cd05281         267 --PVDIDLNNLVIFKGLTVQGITGRK----MFETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGK-CGKVVL  339 (341)
T ss_pred             --CcccccchhhhccceEEEEEecCC----cchhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCC-CceEEe
Confidence              111111223566777777665322    234577888999999876  44567889999999999999988 899998


Q ss_pred             Ee
Q 026217          237 EV  238 (241)
Q Consensus       237 ~~  238 (241)
                      ++
T Consensus       340 ~~  341 (341)
T cd05281         340 YP  341 (341)
T ss_pred             cC
Confidence            63

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=99.94  E-value=9.3e-25  Score=177.74  Aligned_cols=216  Identities=21%  Similarity=0.282  Sum_probs=171.1

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVV   80 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~   80 (241)
                      |+|+||++++++.++++ |++  ++.+.|+++.++++||+++.+...+ ++++|+|.| +|++|++++|+|+++|+ +|+
T Consensus       120 g~~~~~v~v~~~~~~~i-P~~--~~~~~aa~~~~~~~a~~~l~~~~~~-~~~~VLI~g-~g~vG~~~~~lak~~G~~~v~  194 (339)
T cd08232         120 GGFREYLVVDASQCVPL-PDG--LSLRRAALAEPLAVALHAVNRAGDL-AGKRVLVTG-AGPIGALVVAAARRAGAAEIV  194 (339)
T ss_pred             CceeeEEEechHHeEEC-cCC--CCHHHhhhcchHHHHHHHHHhcCCC-CCCEEEEEC-CCHHHHHHHHHHHHcCCcEEE
Confidence            78999999999999999 999  4544445578889999999766556 999999977 59999999999999999 899


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeecccCCC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNND  159 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~  159 (241)
                      ++++++++.+.++ ++|.++++++++. ++. .... ..+++|+++||.|+ ..+...+++++++|+++.+|..+.    
T Consensus       195 ~~~~s~~~~~~~~-~~g~~~vi~~~~~-~~~-~~~~-~~~~vd~vld~~g~~~~~~~~~~~L~~~G~~v~~g~~~~----  266 (339)
T cd08232         195 ATDLADAPLAVAR-AMGADETVNLARD-PLA-AYAA-DKGDFDVVFEASGAPAALASALRVVRPGGTVVQVGMLGG----  266 (339)
T ss_pred             EECCCHHHHHHHH-HcCCCEEEcCCch-hhh-hhhc-cCCCccEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC----
Confidence            9998888888888 8999889888765 421 1111 12369999999995 678899999999999999986331    


Q ss_pred             CCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCcee--ccceeecCCcHHHHHHHhhcCCCcceEEEE
Q 026217          160 KPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQVVE  237 (241)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~l~~~~~~gk~vv~  237 (241)
                        ....+....+.+++++.+...      ..+.++.+++++.+|.+++  .+.+++++++++++++.+.+++..||+|++
T Consensus       267 --~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  338 (339)
T cd08232         267 --PVPLPLNALVAKELDLRGSFR------FDDEFAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLS  338 (339)
T ss_pred             --CccCcHHHHhhcceEEEEEec------CHHHHHHHHHHHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEe
Confidence              112233344667778777652      2456788889999998864  366889999999999999988888999987


Q ss_pred             e
Q 026217          238 V  238 (241)
Q Consensus       238 ~  238 (241)
                      +
T Consensus       339 ~  339 (339)
T cd08232         339 F  339 (339)
T ss_pred             C
Confidence            4

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=99.94  E-value=2e-24  Score=176.15  Aligned_cols=219  Identities=20%  Similarity=0.224  Sum_probs=177.8

Q ss_pred             CccceEEeecCC--ceeeecCCCCCcchh----hhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHc
Q 026217            2 TGWEEYSLVTAP--RLFKIQHTDMPLSYY----TGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLV   75 (241)
Q Consensus         2 G~~ae~~~v~~~--~~~~i~P~~~~~~~~----~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~   75 (241)
                      |+|+||+.++.+  .++++ |++++...+    .+++...++|||+++. .+.++++++++|.| +|++|++++|+|++.
T Consensus       115 g~~~~~~~v~~~~~~~~~l-P~~l~~~~~~~~~~~~l~~~~~~a~~~~~-~~~~~~g~~vlI~g-~g~vg~~~~~lak~~  191 (345)
T cd08287         115 GGQGEYVRVPLADGTLVKV-PGSPSDDEDLLPSLLALSDVMGTGHHAAV-SAGVRPGSTVVVVG-DGAVGLCAVLAAKRL  191 (345)
T ss_pred             CceEEEEEcchhhCceEEC-CCCCChhhhhhhhhHhhhcHHHHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHc
Confidence            889999999975  89999 998554101    1244477899999984 67899999999976 699999999999999


Q ss_pred             CCE-EEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEee
Q 026217           76 GCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus        76 g~~-v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      |++ ++++++++++.+.++ ++|++.+++++.. ++.+.+.+.+++ ++|+++||+|+ ..+..++++++++|+++.+|.
T Consensus       192 G~~~v~~~~~~~~~~~~~~-~~ga~~v~~~~~~-~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~  269 (345)
T cd08287         192 GAERIIAMSRHEDRQALAR-EFGATDIVAERGE-EAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGV  269 (345)
T ss_pred             CCCEEEEECCCHHHHHHHH-HcCCceEecCCcc-cHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecc
Confidence            994 888888888888888 9999999999886 788888887766 89999999985 688999999999999999886


Q ss_pred             ecccCCCCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCcee--ccceeecCCcHHHHHHHhhcCCC
Q 026217          153 ISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRN  230 (241)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~l~~~~~  230 (241)
                      ...      ....+....+.+++++.+.....     .+.+.++++++.++.+++  .+...+++++++++++.+.+++.
T Consensus       270 ~~~------~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~  338 (345)
T cd08287         270 PHG------GVELDVRELFFRNVGLAGGPAPV-----RRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRA  338 (345)
T ss_pred             cCC------CCccCHHHHHhcceEEEEecCCc-----HHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCc
Confidence            431      12234446678899988754332     567888999999999886  35688999999999999887765


Q ss_pred             cceEEEE
Q 026217          231 VGKQVVE  237 (241)
Q Consensus       231 ~gk~vv~  237 (241)
                      . |++++
T Consensus       339 ~-k~~~~  344 (345)
T cd08287         339 I-KVLLR  344 (345)
T ss_pred             e-EEEeC
Confidence            5 99885

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=99.94  E-value=1.1e-24  Score=178.18  Aligned_cols=232  Identities=20%  Similarity=0.204  Sum_probs=169.8

Q ss_pred             CccceEEeecCC----ceeeecCCCCCcchhhhhcCchhHHHHHHHHHhc-CCCCCcEEEEEcCCchHHHHHHHHHHHc-
Q 026217            2 TGWEEYSLVTAP----RLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVC-SPKQGEYVFVSAASGAVGQLVGQFAKLV-   75 (241)
Q Consensus         2 G~~ae~~~v~~~----~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~-~~~~~~~vlI~ga~g~~G~~avqla~~~-   75 (241)
                      |+|++|++++..    .++++ |++++.. +++.++.++.|||+++.... .+++|++++|+|+++++|++++|+|+.+ 
T Consensus        99 g~~~~~~~v~~~~~~~~~~~l-P~~l~~~-~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~  176 (352)
T cd08247          99 GTLSQYLLVDPKKDKKSITRK-PENISLE-EAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHY  176 (352)
T ss_pred             ceeeEEEEEccccccceeEEC-CCCCCHH-HHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcC
Confidence            789999999998    78999 9885554 47888999999999997766 7999999999999999999999999987 


Q ss_pred             CC-EEEEEeCCHHHHHHHHHHcCCCeeecCCCchh---HHHHH-HHHC-CCCccEEEeCCCc-hhHHHHHHhhc---cCC
Q 026217           76 GC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPD---LDAAL-KRYF-PEGINIYFENVGG-KMLDAVLLNMR---IQG  145 (241)
Q Consensus        76 g~-~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~---~~~~i-~~~~-~~~~d~v~d~~g~-~~~~~~~~~l~---~~G  145 (241)
                      +. +|+++. ++++.+.++ ++|++++++.++. +   +..++ +..+ ++++|+++||+|+ .....++++++   ++|
T Consensus       177 ~~~~v~~~~-~~~~~~~~~-~~g~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~G  253 (352)
T cd08247         177 NIGTVVGTC-SSRSAELNK-KLGADHFIDYDAH-SGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKNG  253 (352)
T ss_pred             CcceEEEEe-ChhHHHHHH-HhCCCEEEecCCC-cccchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCCC
Confidence            55 677776 566667777 8999888887765 4   44444 4444 3389999999997 67788999999   999


Q ss_pred             EEEEEeeecccCCCCCC-----CccChHHHhhcceEEEEeecccc-cchhHHHHHHHHHHHHcCCceeccceeecCCcHH
Q 026217          146 RITLCGMISQYNNDKPE-----GVHNLTCLISKRIRMEGFLVPDY-FHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAP  219 (241)
Q Consensus       146 ~~v~~g~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~  219 (241)
                      +++.++.....++....     ........+.++..+....+... .....+.+..+++++.++.+++.+.+.+++++++
T Consensus       254 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~  333 (352)
T cd08247         254 HYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYNYQFFLLDPNADWIEKCAELIADGKVKPPIDSVYPFEDYK  333 (352)
T ss_pred             EEEEEeCCCcccccchhhhhccccchhhhhhhhhhcCCCcceEEEEecCCHHHHHHHHHHHhCCCeEeeeccEecHHHHH
Confidence            99987532211000000     00000111222332222221110 0011466888899999999998888899999999


Q ss_pred             HHHHHhhcCCCcceEEEEe
Q 026217          220 AALVGLFSGRNVGKQVVEV  238 (241)
Q Consensus       220 ~a~~~l~~~~~~gk~vv~~  238 (241)
                      ++++.+++++..||+++++
T Consensus       334 ~a~~~~~~~~~~gkvvi~~  352 (352)
T cd08247         334 EAFERLKSNRAKGKVVIKV  352 (352)
T ss_pred             HHHHHHHcCCCCCcEEEeC
Confidence            9999999988889999863

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.93  E-value=3.5e-24  Score=173.05  Aligned_cols=222  Identities=25%  Similarity=0.358  Sum_probs=183.1

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVG   81 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~   81 (241)
                      |+|++|+.++...++++ |++++.. .++.++..+.+||+++.+...+.++++++|+|++|++|++++++++..|++|++
T Consensus        97 g~~~~~~~v~~~~~~~~-p~~~~~~-~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~  174 (326)
T cd08272          97 GSLAEYAVVDARLLALK-PANLSMR-EAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGARVYA  174 (326)
T ss_pred             CceeEEEEecHHHcccC-CCCCCHH-HHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCCEEEE
Confidence            68999999999999999 9985544 377888999999999988889999999999999999999999999999999999


Q ss_pred             EeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCCC
Q 026217           82 SAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDK  160 (241)
Q Consensus        82 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~  160 (241)
                      ++++ ++.+.++ ++|.+.+++...  ++.+.+...+++ ++|.++||+++......+++++++|+++.++...      
T Consensus       175 ~~~~-~~~~~~~-~~g~~~~~~~~~--~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~------  244 (326)
T cd08272         175 TASS-EKAAFAR-SLGADPIIYYRE--TVVEYVAEHTGGRGFDVVFDTVGGETLDASFEAVALYGRVVSILGGA------  244 (326)
T ss_pred             Eech-HHHHHHH-HcCCCEEEecch--hHHHHHHHhcCCCCCcEEEECCChHHHHHHHHHhccCCEEEEEecCC------
Confidence            9977 8889998 899888877654  366677777766 8999999999888888999999999999998642      


Q ss_pred             CCCccChHHHhhcceEEEEeeccc--c----cchhHHHHHHHHHHHHcCCceeccc-eeecCCcHHHHHHHhhcCCCcce
Q 026217          161 PEGVHNLTCLISKRIRMEGFLVPD--Y----FHLYPKFLEMMIPRIKEGKIVYVED-KAEGLESAPAALVGLFSGRNVGK  233 (241)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~l~~~~~a~~~l~~~~~~gk  233 (241)
                         .........+++++.+.....  .    +....+.+..+++++.++.+++.+. ..|+++++.++++.+.+++..+|
T Consensus       245 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (326)
T cd08272         245 ---THDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVERGQLRPLLDPRTFPLEEAAAAHARLESGSARGK  321 (326)
T ss_pred             ---ccchhhHhhhcceEEEEEcccccccccchhhHHHHHHHHHHHHHCCCcccccccceecHHHHHHHHHHHHcCCcccE
Confidence               011112236777777766432  1    3334567888999999999987765 88999999999999998887889


Q ss_pred             EEEEe
Q 026217          234 QVVEV  238 (241)
Q Consensus       234 ~vv~~  238 (241)
                      +++++
T Consensus       322 vv~~~  326 (326)
T cd08272         322 IVIDV  326 (326)
T ss_pred             EEEEC
Confidence            99864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.93  E-value=2.3e-24  Score=174.07  Aligned_cols=206  Identities=19%  Similarity=0.213  Sum_probs=163.9

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVG   81 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~   81 (241)
                      |+|++|+.++++.++++ |+++  +.+.+++..+..++|.++ +..+++++++|+|+| +|++|++++|+|+.+|++|++
T Consensus       110 g~~~~~~~v~~~~~~~l-P~~~--~~~~aa~~~~~~~~~~~~-~~~~~~~g~~vlV~g-~g~vg~~~~q~a~~~G~~vi~  184 (319)
T cd08242         110 GAFAEYLTLPLENLHVV-PDLV--PDEQAVFAEPLAAALEIL-EQVPITPGDKVAVLG-DGKLGLLIAQVLALTGPDVVL  184 (319)
T ss_pred             CceEEEEEechHHeEEC-cCCC--CHHHhhhhhHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEE
Confidence            78999999999999999 9984  433333335556676655 667899999999997 699999999999999999999


Q ss_pred             EeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeecccCCCC
Q 026217           82 SAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDK  160 (241)
Q Consensus        82 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~  160 (241)
                      ++.++++.+.++ ++|++.+++++..         ..++++|+++||+|+ ..+...+++++++|+++..+....     
T Consensus       185 ~~~~~~~~~~~~-~~g~~~~~~~~~~---------~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~~-----  249 (319)
T cd08242         185 VGRHSEKLALAR-RLGVETVLPDEAE---------SEGGGFDVVVEATGSPSGLELALRLVRPRGTVVLKSTYAG-----  249 (319)
T ss_pred             EcCCHHHHHHHH-HcCCcEEeCcccc---------ccCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCC-----
Confidence            999999999999 7999877765431         222389999999986 678889999999999998654221     


Q ss_pred             CCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCc--eeccceeecCCcHHHHHHHhhcCCCcceEEEE
Q 026217          161 PEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKI--VYVEDKAEGLESAPAALVGLFSGRNVGKQVVE  237 (241)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv~  237 (241)
                       ....+...++.++.++.+.....        ++.+++++.++.+  .+.+.+.||++++++|++.+.++. .+|++++
T Consensus       250 -~~~~~~~~~~~~~~~i~~~~~~~--------~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~k~vi~  318 (319)
T cd08242         250 -PASFDLTKAVVNEITLVGSRCGP--------FAPALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPG-ALKVLLR  318 (319)
T ss_pred             -CCccCHHHheecceEEEEEeccc--------HHHHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCC-ceEEEeC
Confidence             12334456667888888775432        6778899999999  456778999999999999998776 4799886

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>PLN02702 L-idonate 5-dehydrogenase

Probab=99.93  E-value=6.3e-24  Score=174.43  Aligned_cols=217  Identities=20%  Similarity=0.257  Sum_probs=171.0

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVV   80 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~   80 (241)
                      |+|+||+.++.+.++++ |++  ++++.+++..++.++++++ ...++.++++|+|+| +|++|++++|+|+..|+ .|+
T Consensus       136 g~~~~y~~v~~~~~~~~-P~~--l~~~~aa~~~~~~~a~~~~-~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~G~~~v~  210 (364)
T PLN02702        136 GSLANQVVHPADLCFKL-PEN--VSLEEGAMCEPLSVGVHAC-RRANIGPETNVLVMG-AGPIGLVTMLAARAFGAPRIV  210 (364)
T ss_pred             CcccceEEcchHHeEEC-CCC--CCHHHHhhhhHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEE
Confidence            78999999999999999 999  4443344445666788888 678899999999997 59999999999999999 577


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCC--CchhHHHHHHHH---CCCCccEEEeCCC-chhHHHHHHhhccCCEEEEEeeec
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYK--EEPDLDAALKRY---FPEGINIYFENVG-GKMLDAVLLNMRIQGRITLCGMIS  154 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~--~~~~~~~~i~~~---~~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~  154 (241)
                      ++++++++.+.++ ++|++.++++.  +. ++.+++...   .++++|+++||+| ...+..++++++++|+++.+|...
T Consensus       211 ~~~~~~~~~~~~~-~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  288 (364)
T PLN02702        211 IVDVDDERLSVAK-QLGADEIVLVSTNIE-DVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGH  288 (364)
T ss_pred             EECCCHHHHHHHH-HhCCCEEEecCcccc-cHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCC
Confidence            7877888888888 89998776543  34 566666554   3348999999999 478899999999999999998642


Q ss_pred             ccCCCCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCce--eccceeecC--CcHHHHHHHhhcCCC
Q 026217          155 QYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIV--YVEDKAEGL--ESAPAALVGLFSGRN  230 (241)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~l--~~~~~a~~~l~~~~~  230 (241)
                      .      ...........+++++.++...      ...+..+++++.++.+.  +.+.++|++  +++++|++.+.+++.
T Consensus       289 ~------~~~~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~  356 (364)
T PLN02702        289 N------EMTVPLTPAAAREVDVVGVFRY------RNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGN  356 (364)
T ss_pred             C------CCcccHHHHHhCccEEEEeccC------hHHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCC
Confidence            1      1123445677788888886542      34677889999999886  445677655  799999999998888


Q ss_pred             cceEEEE
Q 026217          231 VGKQVVE  237 (241)
Q Consensus       231 ~gk~vv~  237 (241)
                      .+|+++.
T Consensus       357 ~~kvv~~  363 (364)
T PLN02702        357 AIKVMFN  363 (364)
T ss_pred             ceEEEEe
Confidence            8999985

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.93  E-value=3.4e-24  Score=173.81  Aligned_cols=225  Identities=24%  Similarity=0.270  Sum_probs=174.1

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVG   81 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~   81 (241)
                      |+|++|+.++.+.++++ |++++.. ++++++.++.+||+++.+.+.+.++++++|+|++|++|++++++|+..|++|++
T Consensus        92 g~~~~~~~~~~~~~~~~-p~~~~~~-~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~v~~  169 (331)
T cd08273          92 GGNAEYINLDAKYLVPV-PEGVDAA-EAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGAEVYG  169 (331)
T ss_pred             cceeeEEEechHHeEEC-CCCCCHH-HHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEE
Confidence            88999999999999999 9985555 477899999999999988788999999999999999999999999999999999


Q ss_pred             EeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCCCC
Q 026217           82 SAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKP  161 (241)
Q Consensus        82 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~  161 (241)
                      ++. +++.+.++ ++|+.. ++.+.. ++...  ...++++|.++||+|+.....++++++++|+++.+|.....+..  
T Consensus       170 ~~~-~~~~~~~~-~~g~~~-~~~~~~-~~~~~--~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~--  241 (331)
T cd08273         170 TAS-ERNHAALR-ELGATP-IDYRTK-DWLPA--MLTPGGVDVVFDGVGGESYEESYAALAPGGTLVCYGGNSSLLQG--  241 (331)
T ss_pred             EeC-HHHHHHHH-HcCCeE-EcCCCc-chhhh--hccCCCceEEEECCchHHHHHHHHHhcCCCEEEEEccCCCCCCc--
Confidence            996 88888888 899653 455444 44443  23334899999999987788999999999999999875422110  


Q ss_pred             CCccCh------------HHHhhcceEEEEeeccc--ccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhc
Q 026217          162 EGVHNL------------TCLISKRIRMEGFLVPD--YFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFS  227 (241)
Q Consensus       162 ~~~~~~------------~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~  227 (241)
                      ....+.            .....+++++.+.....  .++...+.+..+++++.+|.+++.+..++++++++++++.+.+
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~  321 (331)
T cd08273         242 RRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIRPKIAKRLPLSEVAEAHRLLES  321 (331)
T ss_pred             cccccchhhhhhhhhhhcceeccceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCccCCcceEEcHHHHHHHHHHHHc
Confidence            000000            11122333333333211  1334467889999999999999888889999999999999998


Q ss_pred             CCCcceEEE
Q 026217          228 GRNVGKQVV  236 (241)
Q Consensus       228 ~~~~gk~vv  236 (241)
                      +...||+|+
T Consensus       322 ~~~~gkvv~  330 (331)
T cd08273         322 GKVVGKIVL  330 (331)
T ss_pred             CCCcceEEe
Confidence            888889886

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=99.93  E-value=3.1e-24  Score=173.65  Aligned_cols=209  Identities=29%  Similarity=0.361  Sum_probs=168.4

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVG   81 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~   81 (241)
                      |+|++|+.++.+.++++ |++++.. +++.++.++.+||+++.. .+++++++++|+|++|++|++++++|++.|++|++
T Consensus       116 g~~~~~~~v~~~~~~~~-p~~~~~~-~~~~~~~~~~~a~~~l~~-~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~  192 (325)
T cd08264         116 GGYAEYIVVPEKNLFKI-PDSISDE-LAASLPVAALTAYHALKT-AGLGPGETVVVFGASGNTGIFAVQLAKMMGAEVIA  192 (325)
T ss_pred             CceeeEEEcCHHHceeC-CCCCCHH-HhhhhhhhhHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEE
Confidence            78999999999999999 9985544 478889999999999965 88999999999999999999999999999999988


Q ss_pred             EeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCCCC
Q 026217           82 SAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKP  161 (241)
Q Consensus        82 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~  161 (241)
                      +++    .+.++ ++|++++++.++   ..+.+++.+ +++|+++|++|+..+...+++++++|+++.+|....     .
T Consensus       193 ~~~----~~~~~-~~g~~~~~~~~~---~~~~l~~~~-~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~-----~  258 (325)
T cd08264         193 VSR----KDWLK-EFGADEVVDYDE---VEEKVKEIT-KMADVVINSLGSSFWDLSLSVLGRGGRLVTFGTLTG-----G  258 (325)
T ss_pred             EeH----HHHHH-HhCCCeeecchH---HHHHHHHHh-CCCCEEEECCCHHHHHHHHHhhccCCEEEEEecCCC-----C
Confidence            873    26676 899988887643   345566555 679999999998888999999999999999987321     1


Q ss_pred             CCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceE
Q 026217          162 EGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQ  234 (241)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~  234 (241)
                      ....+...++.++.++.+.....     ++.+..+++++...  +..+.+.|+++++++|++.+.++...+|+
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~~kv  324 (325)
T cd08264         259 EVKLDLSDLYSKQISIIGSTGGT-----RKELLELVKIAKDL--KVKVWKTFKLEEAKEALKELFSKERDGRI  324 (325)
T ss_pred             CCccCHHHHhhcCcEEEEccCCC-----HHHHHHHHHHHHcC--CceeEEEEcHHHHHHHHHHHHcCCCcccc
Confidence            12344556667777777765543     56777888888544  34566889999999999999988777775

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=99.93  E-value=5.7e-24  Score=172.49  Aligned_cols=214  Identities=26%  Similarity=0.306  Sum_probs=174.6

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVG   81 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~   81 (241)
                      |+|++|+.++++.++++ |++++.. +++.++..++|||+++.. ..+.++++|+|+|+ |++|++++++|+..|++|++
T Consensus       116 g~~~~~~~v~~~~~~~~-p~~~~~~-~~~~l~~~~~ta~~~l~~-~~~~~~~~vlI~g~-g~iG~~~~~~a~~~G~~v~~  191 (330)
T cd08245         116 GGYAEYMVADAEYTVLL-PDGLPLA-QAAPLLCAGITVYSALRD-AGPRPGERVAVLGI-GGLGHLAVQYARAMGFETVA  191 (330)
T ss_pred             CccccEEEEcHHHeEEC-CCCCCHH-HhhhhhhhHHHHHHHHHh-hCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEE
Confidence            68999999999999999 9985544 477899999999999965 78999999999975 88999999999999999999


Q ss_pred             EeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeecccCCCC
Q 026217           82 SAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDK  160 (241)
Q Consensus        82 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~  160 (241)
                      +++++++.+.++ ++|.+.+++.... .....    ..+++|+++|++++ .....++++++++|+++.++.....    
T Consensus       192 ~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~----~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~~----  261 (330)
T cd08245         192 ITRSPDKRELAR-KLGADEVVDSGAE-LDEQA----AAGGADVILVTVVSGAAAEAALGGLRRGGRIVLVGLPESP----  261 (330)
T ss_pred             EeCCHHHHHHHH-HhCCcEEeccCCc-chHHh----ccCCCCEEEECCCcHHHHHHHHHhcccCCEEEEECCCCCC----
Confidence            999999999998 8998888776654 33322    22479999999874 7788999999999999999864221    


Q ss_pred             CCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEE
Q 026217          161 PEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVV  236 (241)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv  236 (241)
                       ....+...++.++.++.+.....     .+.+..+++++.++.+.+ ....++++++.++++.+.+++..||+|+
T Consensus       262 -~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ll~~~~l~~-~~~~~~~~~~~~a~~~~~~~~~~~~~v~  330 (330)
T cd08245         262 -PFSPDIFPLIMKRQSIAGSTHGG-----RADLQEALDFAAEGKVKP-MIETFPLDQANEAYERMEKGDVRFRFVL  330 (330)
T ss_pred             -ccccchHHHHhCCCEEEEeccCC-----HHHHHHHHHHHHcCCCcc-eEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence             11222345667788888877644     567888889999999876 4478999999999999999988888875

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=99.93  E-value=8.9e-24  Score=171.61  Aligned_cols=216  Identities=27%  Similarity=0.392  Sum_probs=172.9

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCE-EE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-VV   80 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~-v~   80 (241)
                      |+|++|+.++.+.++++ |++++.. +++ ....+.++++++ ..+++.++++|+|+| .|.+|++++++|+..|++ |+
T Consensus       114 g~~~~~~~v~~~~~~~l-P~~~~~~-~aa-~~~~~~~a~~~l-~~~~~~~g~~vlI~g-~g~vg~~~~~la~~~G~~~v~  188 (334)
T cd08234         114 GGFAEYVVVPAKQVYKI-PDNLSFE-EAA-LAEPLSCAVHGL-DLLGIKPGDSVLVFG-AGPIGLLLAQLLKLNGASRVT  188 (334)
T ss_pred             CcceeEEEecHHHcEEC-cCCCCHH-HHh-hhhHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEE
Confidence            78999999999999999 9995544 244 447888999998 778999999999997 599999999999999996 89


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeecccCCC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNND  159 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~  159 (241)
                      ++++++++.+.++ ++|.+.++++++. +...+ +...++++|+++||+|+ ......+++++++|+++.+|.....   
T Consensus       189 ~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~-~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~---  262 (334)
T cd08234         189 VAEPNEEKLELAK-KLGATETVDPSRE-DPEAQ-KEDNPYGFDVVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPD---  262 (334)
T ss_pred             EECCCHHHHHHHH-HhCCeEEecCCCC-CHHHH-HHhcCCCCcEEEECCCChHHHHHHHHHHhcCCEEEEEecCCCC---
Confidence            9998999999998 8999888887765 55554 43333489999999984 6788899999999999999874321   


Q ss_pred             CCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCcee--ccceeecCCcHHHHHHHhhcCCCcceEEE
Q 026217          160 KPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQVV  236 (241)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~l~~~~~~gk~vv  236 (241)
                       .....+...++.+++++.+....      .+.++.+.+++.++.+.+  .+..+++++++.++++.+.+ ...||+|+
T Consensus       263 -~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi  333 (334)
T cd08234         263 -ARVSISPFEIFQKELTIIGSFIN------PYTFPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRS-GGALKVVV  333 (334)
T ss_pred             -CCcccCHHHHHhCCcEEEEeccC------HHHHHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence             11223344455577887776532      456788889999998875  35678999999999999998 77889886

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.93  E-value=1.5e-23  Score=169.36  Aligned_cols=223  Identities=21%  Similarity=0.325  Sum_probs=181.7

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVG   81 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~   81 (241)
                      |+|++|+.+++..++++ |++++.. +++.+++++.+|++++.+.+.+.+|++++|+|+++++|++++++++..|++|++
T Consensus        94 ~~~~s~~~~~~~~~~~i-p~~~~~~-~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~~v~~  171 (325)
T cd08271          94 GSFAEYTVVDARAVLPL-PDSLSFE-EAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGLRVIT  171 (325)
T ss_pred             ccceeEEEeCHHHeEEC-CCCCCHH-HHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEE
Confidence            68999999999999999 9985554 478899999999999988889999999999999899999999999999999998


Q ss_pred             EeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCCC
Q 026217           82 SAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDK  160 (241)
Q Consensus        82 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~  160 (241)
                      +. ++++.+.++ .+|++.+++.... ++...+.+...+ ++|.+++|+++......+++++++|+++.++.....    
T Consensus       172 ~~-~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~----  244 (325)
T cd08271         172 TC-SKRNFEYVK-SLGADHVIDYNDE-DVCERIKEITGGRGVDAVLDTVGGETAAALAPTLAFNGHLVCIQGRPDA----  244 (325)
T ss_pred             EE-cHHHHHHHH-HcCCcEEecCCCc-cHHHHHHHHcCCCCCcEEEECCCcHhHHHHHHhhccCCEEEEEcCCCCC----
Confidence            88 777888887 8999888888776 777788887766 899999999987777899999999999998753211    


Q ss_pred             CCCccChHHHhhcceEEEEeecccc----c----chhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcc
Q 026217          161 PEGVHNLTCLISKRIRMEGFLVPDY----F----HLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVG  232 (241)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~----~----~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~g  232 (241)
                        .   ....+.+++.+........    +    ....+.+.++.+++.++.+++.....++++++.++++.+.++...+
T Consensus       245 --~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~~  319 (325)
T cd08271         245 --S---PDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPLVIEVLPFEQLPEALRALKDRHTRG  319 (325)
T ss_pred             --c---chhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCeeeccceEEcHHHHHHHHHHHHcCCccc
Confidence              0   1122344455444433221    1    2345667888999999999887778899999999999999888889


Q ss_pred             eEEEEe
Q 026217          233 KQVVEV  238 (241)
Q Consensus       233 k~vv~~  238 (241)
                      |+++++
T Consensus       320 kiv~~~  325 (325)
T cd08271         320 KIVVTI  325 (325)
T ss_pred             eEEEEC
Confidence            998863

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.93  E-value=1.5e-23  Score=170.22  Aligned_cols=232  Identities=27%  Similarity=0.393  Sum_probs=184.8

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHc-CCEEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVV   80 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~-g~~v~   80 (241)
                      |+|++|+.++.+.++++ |++++.. +++.++.++++||+++.+...++++++|+|+|++|++|++++++|+.. +..++
T Consensus        91 ~~~~~~~~~~~~~~~~i-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~~~~~~~  168 (337)
T cd08275          91 GGYAEVVNVPADQVFPL-PDGMSFE-EAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNVTVV  168 (337)
T ss_pred             CeeeeEEEecHHHeEEC-CCCCCHH-HHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHccCcEEE
Confidence            78999999999999999 9885444 377888999999999988889999999999999999999999999998 44444


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCCC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDK  160 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~  160 (241)
                      ... .+++.+.++ ++|.+.+++.... ++...++..+++++|+++||+|+.....++++++++|+++.+|.....+...
T Consensus       169 ~~~-~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~d~v~~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~  245 (337)
T cd08275         169 GTA-SASKHEALK-ENGVTHVIDYRTQ-DYVEEVKKISPEGVDIVLDALGGEDTRKSYDLLKPMGRLVVYGAANLVTGEK  245 (337)
T ss_pred             EeC-CHHHHHHHH-HcCCcEEeeCCCC-cHHHHHHHHhCCCceEEEECCcHHHHHHHHHhhccCcEEEEEeecCCcCccc
Confidence            333 456788887 8999888888776 7888888777568999999999888889999999999999998754211000


Q ss_pred             -----------CCCccChHHHhhcceEEEEeecccc---cchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhh
Q 026217          161 -----------PEGVHNLTCLISKRIRMEGFLVPDY---FHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLF  226 (241)
Q Consensus       161 -----------~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~  226 (241)
                                 ..........+.+++++.++.....   .......+..+++++.++.+++.+...|++++++++++.+.
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (337)
T cd08275         246 RSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKPKIDSVFPFEEVGEAMRRLQ  325 (337)
T ss_pred             ccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCCceeeEEcHHHHHHHHHHHH
Confidence                       0011222456788888888876432   11223567888899999999888778999999999999999


Q ss_pred             cCCCcceEEEEe
Q 026217          227 SGRNVGKQVVEV  238 (241)
Q Consensus       227 ~~~~~gk~vv~~  238 (241)
                      +++..||+++++
T Consensus       326 ~~~~~~kvv~~~  337 (337)
T cd08275         326 SRKNIGKVVLTP  337 (337)
T ss_pred             cCCCcceEEEeC
Confidence            988889999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=99.93  E-value=1.8e-24  Score=176.84  Aligned_cols=229  Identities=24%  Similarity=0.344  Sum_probs=170.9

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCC----CcEEEEEcCCchHHHHHHHHHHHcCC
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQ----GEYVFVSAASGAVGQLVGQFAKLVGC   77 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~----~~~vlI~ga~g~~G~~avqla~~~g~   77 (241)
                      |+|++|+.++.+.++++ |++++.. +++.++.+++|||+++.+...+.+    |++|+|+|++|++|++++++|+++|+
T Consensus       111 g~~~~~~~v~~~~~~~l-p~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~  188 (350)
T cd08248         111 GTHAEYVVVPENEVSKK-PKNLSHE-EAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGA  188 (350)
T ss_pred             ccceeEEEecHHHeecC-CCCCCHH-HHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCC
Confidence            78999999999999999 9985544 478899999999999977777654    99999999999999999999999999


Q ss_pred             EEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccC
Q 026217           78 YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYN  157 (241)
Q Consensus        78 ~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~  157 (241)
                      +|+++.++ ++.+.++ ++|.+.+++..+. ++.+.+...  +++|+++|++|+.....++++++++|+++.+|.....+
T Consensus       189 ~v~~~~~~-~~~~~~~-~~g~~~~~~~~~~-~~~~~l~~~--~~vd~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~  263 (350)
T cd08248         189 HVTTTCST-DAIPLVK-SLGADDVIDYNNE-DFEEELTER--GKFDVILDTVGGDTEKWALKLLKKGGTYVTLVSPLLKN  263 (350)
T ss_pred             eEEEEeCc-chHHHHH-HhCCceEEECCCh-hHHHHHHhc--CCCCEEEECCChHHHHHHHHHhccCCEEEEecCCcccc
Confidence            99998854 6777777 8999888887765 565555432  37999999999888899999999999999998643210


Q ss_pred             CCC-CC--Ccc-ChHHHhhcceE-EE-Eeec-ccccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCC
Q 026217          158 NDK-PE--GVH-NLTCLISKRIR-ME-GFLV-PDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRN  230 (241)
Q Consensus       158 ~~~-~~--~~~-~~~~~~~~~~~-~~-~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~  230 (241)
                      ... ..  ... ....+...... +. .... +.......+.+..+++++.+|.+.+.+...|+++++.++++.+.+++.
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~  343 (350)
T cd08248         264 TDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFFSPSGSALDELAKLVEDGKIKPVIDKVFPFEEVPEAYEKVESGHA  343 (350)
T ss_pred             cccccccchhhhhHHHHHHHHHHHHhcCCCeeEEEECCCHHHHHHHHHHHhCCCEecccceeecHHHHHHHHHHHhcCCC
Confidence            000 00  000 00011111100 00 0000 000112367789999999999998888889999999999999998887


Q ss_pred             cceEEEE
Q 026217          231 VGKQVVE  237 (241)
Q Consensus       231 ~gk~vv~  237 (241)
                      .+|++++
T Consensus       344 ~~~vv~~  350 (350)
T cd08248         344 RGKTVIK  350 (350)
T ss_pred             ceEEEeC
Confidence            7888863

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.93  E-value=1.5e-23  Score=170.01  Aligned_cols=208  Identities=22%  Similarity=0.213  Sum_probs=168.7

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVG   81 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~   81 (241)
                      |+|++|+.++...++++ |++++.. ++++++++++|||+++ ..++++++++++|+| +|++|+++++++++.|++|++
T Consensus       121 g~~~~~~~~~~~~~~~l-p~~~~~~-~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g-~g~vg~~~~~la~~~g~~v~~  196 (329)
T cd08298         121 GGYAEYMVADERFAYPI-PEDYDDE-EAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYG-FGASAHLALQIARYQGAEVFA  196 (329)
T ss_pred             CceEEEEEecchhEEEC-CCCCCHH-HhhHhhhhhHHHHHHH-HhhCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEE
Confidence            78999999999999999 9995555 4789999999999999 788999999999997 699999999999999999999


Q ss_pred             EeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCC-chhHHHHHHhhccCCEEEEEeeecccCCCC
Q 026217           82 SAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDK  160 (241)
Q Consensus        82 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~  160 (241)
                      +++++++.+.++ ++|++.+++.+..          .++++|+++++.+ ...+..++++++++|+++.+|....     
T Consensus       197 ~~~~~~~~~~~~-~~g~~~~~~~~~~----------~~~~vD~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~-----  260 (329)
T cd08298         197 FTRSGEHQELAR-ELGADWAGDSDDL----------PPEPLDAAIIFAPVGALVPAALRAVKKGGRVVLAGIHMS-----  260 (329)
T ss_pred             EcCChHHHHHHH-HhCCcEEeccCcc----------CCCcccEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCC-----
Confidence            999999999997 8999877766431          1237999999876 4688999999999999998874221     


Q ss_pred             CCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEE
Q 026217          161 PEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVV  236 (241)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv  236 (241)
                      .....+. ..+.++..+.+.....     .+.+..+++++.++.+++. .++|+++++++|++.+++++..||+|+
T Consensus       261 ~~~~~~~-~~~~~~~~i~~~~~~~-----~~~~~~~~~l~~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~~~v~  329 (329)
T cd08298         261 DIPAFDY-ELLWGEKTIRSVANLT-----RQDGEEFLKLAAEIPIKPE-VETYPLEEANEALQDLKEGRIRGAAVL  329 (329)
T ss_pred             CCCccch-hhhhCceEEEEecCCC-----HHHHHHHHHHHHcCCCCce-EEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence            1111222 2244555565554332     5668889999999998874 578999999999999999998899874

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.92  E-value=4.3e-23  Score=166.32  Aligned_cols=221  Identities=27%  Similarity=0.320  Sum_probs=166.2

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVG   81 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~   81 (241)
                      |+|++|+.++.+.++++ |++++.. +++.+++++.+||+++.+...++++++++|+|++|++|++++++|+..|++|++
T Consensus        96 g~~~~~~~~~~~~~~~i-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~~v~~  173 (319)
T cd08267          96 GALAEYVVAPESGLAKK-PEGVSFE-EAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGAHVTG  173 (319)
T ss_pred             ceeeEEEEechhheEEC-CCCCCHH-HHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEE
Confidence            78999999999999999 9985544 478899999999999988777999999999999999999999999999999999


Q ss_pred             EeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCch--hHHHHHHhhccCCEEEEEeeecccCC
Q 026217           82 SAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGGK--MLDAVLLNMRIQGRITLCGMISQYNN  158 (241)
Q Consensus        82 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~--~~~~~~~~l~~~G~~v~~g~~~~~~~  158 (241)
                      ++++ ++.+.++ ++|.+++++.+.. ++.   .....+ ++|++++|+|+.  .....+..++++|+++.+|.......
T Consensus       174 ~~~~-~~~~~~~-~~g~~~~~~~~~~-~~~---~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~g~~i~~g~~~~~~~  247 (319)
T cd08267         174 VCST-RNAELVR-SLGADEVIDYTTE-DFV---ALTAGGEKYDVIFDAVGNSPFSLYRASLALKPGGRYVSVGGGPSGLL  247 (319)
T ss_pred             EeCH-HHHHHHH-HcCCCEeecCCCC-Ccc---hhccCCCCCcEEEECCCchHHHHHHhhhccCCCCEEEEecccccccc
Confidence            9854 8888887 8999888877654 443   333344 899999999953  33344444999999999987432110


Q ss_pred             CCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEE
Q 026217          159 DKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVV  236 (241)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv  236 (241)
                      .. ..... .........+......  +.  .+.+..+++++.++.+++.+...|++++++++++.+.+++..+|+++
T Consensus       248 ~~-~~~~~-~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~~~vvv  319 (319)
T cd08267         248 LV-LLLLP-LTLGGGGRRLKFFLAK--PN--AEDLEQLAELVEEGKLKPVIDSVYPLEDAPEAYRRLKSGRARGKVVI  319 (319)
T ss_pred             cc-ccccc-hhhccccceEEEEEec--CC--HHHHHHHHHHHHCCCeeeeeeeEEcHHHHHHHHHHHhcCCCCCcEeC
Confidence            00 00000 1111111222222211  11  67788899999999999888889999999999999998877788774

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=99.92  E-value=3.5e-23  Score=165.95  Aligned_cols=213  Identities=27%  Similarity=0.406  Sum_probs=174.2

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVG   81 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~   81 (241)
                      |+|++|+.++...++++ |++++.. .++.++..+.+|++++.+...+.++++++|+|++|++|++++++++..|++|++
T Consensus        97 g~~~~~~~~~~~~~~~~-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~~v~~  174 (309)
T cd05289          97 GAYAEYVVVPADELALK-PANLSFE-EAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGARVIA  174 (309)
T ss_pred             CcceeEEEecHHHhccC-CCCCCHH-HHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEE
Confidence            78999999999999999 9885554 377888999999999988777999999999999999999999999999999999


Q ss_pred             EeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCCCC
Q 026217           82 SAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKP  161 (241)
Q Consensus        82 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~  161 (241)
                      ++.++ +.+.++ ++|.+.+++.... ++..   ...++++|.++||+|+.....++++++++|+++.+|....     .
T Consensus       175 ~~~~~-~~~~~~-~~g~~~~~~~~~~-~~~~---~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~-----~  243 (309)
T cd05289         175 TASAA-NADFLR-SLGADEVIDYTKG-DFER---AAAPGGVDAVLDTVGGETLARSLALVKPGGRLVSIAGPPP-----A  243 (309)
T ss_pred             Eecch-hHHHHH-HcCCCEEEeCCCC-chhh---ccCCCCceEEEECCchHHHHHHHHHHhcCcEEEEEcCCCc-----c
Confidence            98777 888887 8998888877665 4443   2223389999999998888999999999999999986321     0


Q ss_pred             CCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEE
Q 026217          162 EGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVV  236 (241)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv  236 (241)
                        ..   ..+.+++++.......  .  .+.+.++.+++.++.+++.+.+.|++++++++++.+..++..+|+++
T Consensus       244 --~~---~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~  309 (309)
T cd05289         244 --EQ---AAKRRGVRAGFVFVEP--D--GEQLAELAELVEAGKLRPVVDRVFPLEDAAEAHERLESGHARGKVVL  309 (309)
T ss_pred             --hh---hhhhccceEEEEEecc--c--HHHHHHHHHHHHCCCEEEeeccEEcHHHHHHHHHHHHhCCCCCcEeC
Confidence              00   3345666666655422  1  56788899999999998888889999999999999998877788774

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=99.91  E-value=1.6e-22  Score=162.37  Aligned_cols=185  Identities=26%  Similarity=0.368  Sum_probs=154.0

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVG   81 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~   81 (241)
                      |+|++|++++...++++ |+++  +++.++++.++++||+++...+.++++++|+|.| +|++|++++|+|+..|++|++
T Consensus       118 g~~~~~~~v~~~~~~~l-p~~~--~~~~aa~~~~~~~a~~~l~~~~~~~~g~~vlI~g-~g~~g~~~~~la~~~G~~v~~  193 (306)
T cd08258         118 GGFAEYVLVPEESLHEL-PENL--SLEAAALTEPLAVAVHAVAERSGIRPGDTVVVFG-PGPIGLLAAQVAKLQGATVVV  193 (306)
T ss_pred             CceEEEEEcchHHeEEC-cCCC--CHHHHHhhchHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEE
Confidence            78999999999999999 9994  4434458889999999998888999999999976 699999999999999999887


Q ss_pred             Ee--CCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeecccC
Q 026217           82 SA--GSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYN  157 (241)
Q Consensus        82 ~~--~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~  157 (241)
                      ++  +++++.+.++ ++|++++ +++.. ++.+.+....++ ++|+++|++|+ ..+...+++++++|+++.+|....  
T Consensus       194 ~~~~~~~~~~~~~~-~~g~~~~-~~~~~-~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--  268 (306)
T cd08258         194 VGTEKDEVRLDVAK-ELGADAV-NGGEE-DLAELVNEITDGDGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGP--  268 (306)
T ss_pred             ECCCCCHHHHHHHH-HhCCccc-CCCcC-CHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCC--
Confidence            73  3455777778 8999878 77776 888888887765 89999999974 678889999999999999988542  


Q ss_pred             CCCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcC
Q 026217          158 NDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEG  203 (241)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  203 (241)
                         .....+...++.+++++.|+....     .++++++++++++|
T Consensus       269 ---~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~~~~~~  306 (306)
T cd08258         269 ---LAASIDVERIIQKELSVIGSRSST-----PASWETALRLLASG  306 (306)
T ss_pred             ---CCcccCHHHHhhcCcEEEEEecCc-----hHhHHHHHHHHhcC
Confidence               112345677788999999999876     66788888888765

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=99.91  E-value=1.1e-22  Score=161.01  Aligned_cols=215  Identities=24%  Similarity=0.272  Sum_probs=165.1

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCE-EE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-VV   80 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~-v~   80 (241)
                      +.|++|+.++.+.++++ |++++.. +++.+ .+++|||+++. ..+++++++++|+| .|++|++++++|+++|++ |+
T Consensus        52 ~~~~~~~~v~~~~~~~i-p~~l~~~-~aa~~-~~~~ta~~~~~-~~~~~~g~~vlI~g-~g~vg~~~i~~a~~~g~~~vi  126 (277)
T cd08255          52 GPHAERVVVPANLLVPL-PDGLPPE-RAALT-ALAATALNGVR-DAEPRLGERVAVVG-LGLVGLLAAQLAKAAGAREVV  126 (277)
T ss_pred             CCcceEEEcCHHHeeEC-cCCCCHH-HhHHH-HHHHHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCcEE
Confidence            46899999999999999 9885544 35556 78999999985 68899999999997 599999999999999997 99


Q ss_pred             EEeCCHHHHHHHHHHcC-CCeeecCCCchhHHHHHHHHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeecccCC
Q 026217           81 GSAGSKDKVDLLKNKFG-FDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNN  158 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g-~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~  158 (241)
                      ++++++++.+.++ ++| .+.+++....        ...+.++|+++|+++. ......+++++++|+++.+|.....  
T Consensus       127 ~~~~~~~~~~~~~-~~g~~~~~~~~~~~--------~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~--  195 (277)
T cd08255         127 GVDPDAARRELAE-ALGPADPVAADTAD--------EIGGRGADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLK--  195 (277)
T ss_pred             EECCCHHHHHHHH-HcCCCccccccchh--------hhcCCCCCEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCC--
Confidence            9999999999888 888 4555443221        1122389999999884 6788999999999999999874321  


Q ss_pred             CCCCCccChHHHhhcceEEEEeecccc--c-----chhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcC-CC
Q 026217          159 DKPEGVHNLTCLISKRIRMEGFLVPDY--F-----HLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSG-RN  230 (241)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~-~~  230 (241)
                          .......+..+.+++.+......  .     ....+.++++++++.++.+++.+.+.+++++++++++.+.++ ..
T Consensus       196 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~  271 (277)
T cd08255         196 ----PLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLEALITHRVPFEDAPEAYRLLFEDPPE  271 (277)
T ss_pred             ----ccccHHHHHhccCeEEeecccccccccccccccccccHHHHHHHHHcCCccccccCccCHHHHHHHHHHHHcCCcc
Confidence                11112334445567776665432  0     122367888999999999988888899999999999999877 34


Q ss_pred             cceEEE
Q 026217          231 VGKQVV  236 (241)
Q Consensus       231 ~gk~vv  236 (241)
                      ..|+++
T Consensus       272 ~~k~~~  277 (277)
T cd08255         272 CLKVVL  277 (277)
T ss_pred             ceeeeC
Confidence            457653

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.90  E-value=1.1e-21  Score=154.55  Aligned_cols=172  Identities=32%  Similarity=0.466  Sum_probs=144.7

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVG   81 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~   81 (241)
                      |+|++|+.++.+.++++ |+++++. +++.++.++.|||+++.....+.++++|+|+|+++ +|++++++++..|.+|++
T Consensus        87 g~~~~~~~v~~~~~~~i-p~~~~~~-~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~  163 (271)
T cd05188          87 GGFAEYVVVPADNLVPL-PDGLSLE-EAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQLAKAAGARVIV  163 (271)
T ss_pred             CcceEEEEechHHeEEC-CCCCCHH-HhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHHcCCeEEE
Confidence            78999999999999999 9985544 47788899999999998877779999999999866 999999999999999999


Q ss_pred             EeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeecccCCC
Q 026217           82 SAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNND  159 (241)
Q Consensus        82 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~  159 (241)
                      +++++++.+.++ ++|.+.++++.+. +....+. ...+ ++|+++|++++ .....++++++++|+++.+|.....   
T Consensus       164 ~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~-~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~---  237 (271)
T cd05188         164 TDRSDEKLELAK-ELGADHVIDYKEE-DLEEELR-LTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTSGG---  237 (271)
T ss_pred             EcCCHHHHHHHH-HhCCceeccCCcC-CHHHHHH-HhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEEccCCCC---
Confidence            999999999998 8998888888776 6666666 4444 89999999998 8888999999999999999874421   


Q ss_pred             CCCCccChHHHhhcceEEEEeeccc
Q 026217          160 KPEGVHNLTCLISKRIRMEGFLVPD  184 (241)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~  184 (241)
                        .........+.+++++.++....
T Consensus       238 --~~~~~~~~~~~~~~~~~~~~~~~  260 (271)
T cd05188         238 --PPLDDLRRLLFKELTIIGSTGGT  260 (271)
T ss_pred             --CCcccHHHHHhcceEEEEeecCC
Confidence              11222456788999999988765

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=99.85  E-value=5.5e-20  Score=129.20  Aligned_cols=127  Identities=25%  Similarity=0.438  Sum_probs=114.0

Q ss_pred             hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCC-chhHHHHHHh
Q 026217           63 AVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVG-GKMLDAVLLN  140 (241)
Q Consensus        63 ~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g-~~~~~~~~~~  140 (241)
                      ++|++++|+|++.|++|+++++++++++.++ ++|+++++++++. ++.+++++.+++ ++|+||||+| ...++.++++
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~-~~Ga~~~~~~~~~-~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~   78 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAK-ELGADHVIDYSDD-DFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKL   78 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-HTTESEEEETTTS-SHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHHHHHHH-hhccccccccccc-ccccccccccccccceEEEEecCcHHHHHHHHHH
Confidence            6899999999999999999999999999999 9999999999998 899999999998 9999999999 6899999999


Q ss_pred             hccCCEEEEEeeecccCCCCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHH
Q 026217          141 MRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIK  201 (241)
Q Consensus       141 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (241)
                      ++++|+++.+|...     ......+...++.+++++.++....     .+.++++++++.
T Consensus        79 l~~~G~~v~vg~~~-----~~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~~la  129 (130)
T PF00107_consen   79 LRPGGRIVVVGVYG-----GDPISFNLMNLMFKEITIRGSWGGS-----PEDFQEALQLLA  129 (130)
T ss_dssp             EEEEEEEEEESSTS-----TSEEEEEHHHHHHTTEEEEEESSGG-----HHHHHHHHHHHH
T ss_pred             hccCCEEEEEEccC-----CCCCCCCHHHHHhCCcEEEEEccCC-----HHHHHHHHHHhc
Confidence            99999999999844     2345677889999999999999987     566666666654

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A

Probab=99.70  E-value=2e-17  Score=115.66  Aligned_cols=122  Identities=28%  Similarity=0.311  Sum_probs=81.7

Q ss_pred             cCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCC--chhH-HHHHHhhccCCEEEEEeeecccCCCCCCCccChHHHhh
Q 026217           96 FGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG--GKML-DAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLIS  172 (241)
Q Consensus        96 ~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g--~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  172 (241)
                      +|+++++||+++ ++      ...+++|+|||++|  ++.+ ..++++| ++|+++.++..           ........
T Consensus         1 LGAd~vidy~~~-~~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~~-----------~~~~~~~~   61 (127)
T PF13602_consen    1 LGADEVIDYRDT-DF------AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGGD-----------LPSFARRL   61 (127)
T ss_dssp             CT-SEEEETTCS-HH------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-SH-----------HHHHHHHH
T ss_pred             CCcCEEecCCCc-cc------cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECCc-----------ccchhhhh
Confidence            689999999976 66      33348999999999  6544 6777888 99999988640           11111112


Q ss_pred             cceEEEEeeccccc--chhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEE
Q 026217          173 KRIRMEGFLVPDYF--HLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVV  236 (241)
Q Consensus       173 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv  236 (241)
                      +...+....+....  +...+.++.+.+++.+|.++|.+.++|||+++.+|++.+++++..||+||
T Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~~i~~~f~l~~~~~A~~~l~~~~~~GKvVl  127 (127)
T PF13602_consen   62 KGRSIRYSFLFSVDPNAIRAEALEELAELVAEGKLKPPIDRVFPLEEAPEAHERLESGHARGKVVL  127 (127)
T ss_dssp             HCHHCEEECCC-H--HHHHHHHHHHHHHHHHTTSS---EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred             cccceEEEEEEecCCCchHHHHHHHHHHHHHCCCeEEeeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence            22233333322111  22467799999999999999999999999999999999999999999997

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=99.55  E-value=2.5e-13  Score=111.39  Aligned_cols=178  Identities=12%  Similarity=0.072  Sum_probs=132.5

Q ss_pred             hHHHHHHHHHhcC-CCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHH
Q 026217           36 GMTAYAGFFEVCS-PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL  114 (241)
Q Consensus        36 ~~ta~~~l~~~~~-~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i  114 (241)
                      .-..|.++.+..+ ..+|++|+|.|+ |.+|+.+++.++.+|++|+++..++.+.+.++ .+|++.+       +..+.+
T Consensus       185 g~s~~~~i~r~t~~~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~-~~G~~~~-------~~~e~v  255 (413)
T cd00401         185 RESLIDGIKRATDVMIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQAA-MEGYEVM-------TMEEAV  255 (413)
T ss_pred             chhhHHHHHHhcCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHHH-hcCCEEc-------cHHHHH
Confidence            3445666666545 368999999996 99999999999999999999999999999999 8998432       122222


Q ss_pred             HHHCCCCccEEEeCCCch-hHHHH-HHhhccCCEEEEEeeecccCCCCCCCccChHHHhhcceEEEEeecccccchhHHH
Q 026217          115 KRYFPEGINIYFENVGGK-MLDAV-LLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKF  192 (241)
Q Consensus       115 ~~~~~~~~d~v~d~~g~~-~~~~~-~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (241)
                           .++|+|++|+|+. .+... ++.++++|+++.+|..        ...++...+..+.+++.+......    ...
T Consensus       256 -----~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~--------~~eId~~~L~~~el~i~g~~~~~~----~~~  318 (413)
T cd00401         256 -----KEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF--------DVEIDVKGLKENAVEVVNIKPQVD----RYE  318 (413)
T ss_pred             -----cCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC--------CCccCHHHHHhhccEEEEccCCcc----eEE
Confidence                 2589999999974 45554 8999999999999852        234667778888888888776431    112


Q ss_pred             HH--HHHHHHHcCCc---eecccee-----ecCC-cHHHHHHHhhcCCC-cceEEEEec
Q 026217          193 LE--MMIPRIKEGKI---VYVEDKA-----EGLE-SAPAALVGLFSGRN-VGKQVVEVA  239 (241)
Q Consensus       193 ~~--~~~~~~~~g~~---~~~~~~~-----~~l~-~~~~a~~~l~~~~~-~gk~vv~~~  239 (241)
                      +.  ..+.++.+|.+   .+.+++.     ++|+ |+.+++..+.++.. .-|+++.+.
T Consensus       319 ~~~g~aI~LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~  377 (413)
T cd00401         319 LPDGRRIILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPK  377 (413)
T ss_pred             cCCcchhhhhhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCH
Confidence            33  57889999988   4455555     6788 99999999987654 357776554

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=99.52  E-value=7e-13  Score=111.39  Aligned_cols=149  Identities=11%  Similarity=0.076  Sum_probs=108.5

Q ss_pred             CCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCee-ecCCCc------------hhHHHHHH
Q 026217           49 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEA-FNYKEE------------PDLDAALK  115 (241)
Q Consensus        49 ~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~-i~~~~~------------~~~~~~i~  115 (241)
                      ..++++|+|+|+ |.+|+++++.|+.+|++|++++.++++.+.++ ++|++.+ +|..+.            .++.+..+
T Consensus       162 ~~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~ae-slGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~  239 (509)
T PRK09424        162 KVPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVE-SMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEM  239 (509)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEEeccccccccccchhhhcchhHHHHHH
Confidence            468999999996 99999999999999999999999999999999 9999843 554321            02222222


Q ss_pred             HH-CC--CCccEEEeCCCch------h-HHHHHHhhccCCEEEEEeeecccCCCCCCCccChHHHhh-cceEEEEeeccc
Q 026217          116 RY-FP--EGINIYFENVGGK------M-LDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLIS-KRIRMEGFLVPD  184 (241)
Q Consensus       116 ~~-~~--~~~d~v~d~~g~~------~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  184 (241)
                      +. .+  +++|+||+|++..      . .+.+++.++++|+++.++...+.+.+.   +.+...++. +++++.|.....
T Consensus       240 ~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~---t~~~~~v~~~~gVti~Gv~n~P  316 (509)
T PRK09424        240 ALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCEL---TVPGEVVVTDNGVTIIGYTDLP  316 (509)
T ss_pred             HHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCccc---ccCccceEeECCEEEEEeCCCc
Confidence            22 33  2699999999852      3 489999999999999999854322221   222334555 889998877432


Q ss_pred             ccchhHHHHHHHHHHHHcCCcee
Q 026217          185 YFHLYPKFLEMMIPRIKEGKIVY  207 (241)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~g~~~~  207 (241)
                           .+...+..+++.++.+..
T Consensus       317 -----~~~p~~As~lla~~~i~l  334 (509)
T PRK09424        317 -----SRLPTQSSQLYGTNLVNL  334 (509)
T ss_pred             -----hhHHHHHHHHHHhCCccH
Confidence                 344556788888887754

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=98.87  E-value=4.4e-08  Score=82.59  Aligned_cols=107  Identities=19%  Similarity=0.218  Sum_probs=81.2

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe-eecCCC-------------chhHHHHHH
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKE-------------EPDLDAALK  115 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~-~i~~~~-------------~~~~~~~i~  115 (241)
                      .++++++|.|+ |.+|++++++++.+|++|+++++++++.+.++ ++|.+. .++..+             . ++.+...
T Consensus       162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~-~lGa~~v~v~~~e~g~~~~gYa~~~s~-~~~~~~~  238 (511)
T TIGR00561       162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ-SMGAEFLELDFKEEGGSGDGYAKVMSE-EFIAAEM  238 (511)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEeccccccccccccceeecCH-HHHHHHH
Confidence            46789999996 99999999999999999999999999999999 899864 233211             1 2333233


Q ss_pred             HHCC---CCccEEEeCC---Cch----hHHHHHHhhccCCEEEEEeeecccCCC
Q 026217          116 RYFP---EGINIYFENV---GGK----MLDAVLLNMRIQGRITLCGMISQYNND  159 (241)
Q Consensus       116 ~~~~---~~~d~v~d~~---g~~----~~~~~~~~l~~~G~~v~~g~~~~~~~~  159 (241)
                      +...   .++|++|+|+   |..    ..+..++.+++++.++.++...+.+++
T Consensus       239 ~~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~GGn~E  292 (511)
T TIGR00561       239 ELFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQGGNCE  292 (511)
T ss_pred             HHHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCCCCCEE
Confidence            3222   2799999999   532    457789999999999999886655444

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=98.74  E-value=1.8e-07  Score=73.92  Aligned_cols=171  Identities=16%  Similarity=0.206  Sum_probs=100.6

Q ss_pred             cCCCCCcEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHH---cCCCeeecCCCchhHHHHHHHHCCCC
Q 026217           47 CSPKQGEYVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRYFPEG  121 (241)
Q Consensus        47 ~~~~~~~~vlI~ga~g~~G~~avqla~~~g~--~v~~~~~~~~~~~~~~~~---~g~~~~i~~~~~~~~~~~i~~~~~~~  121 (241)
                      +.++++++||.+|. |+ |..+.++++..|.  +|++++.+++..+.+++.   .+.+.+ ..... ++. .+ ...++.
T Consensus        73 ~~~~~g~~VLDiG~-G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v-~~~~~-d~~-~l-~~~~~~  146 (272)
T PRK11873         73 AELKPGETVLDLGS-GG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNV-EFRLG-EIE-AL-PVADNS  146 (272)
T ss_pred             ccCCCCCEEEEeCC-CC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCE-EEEEc-chh-hC-CCCCCc
Confidence            57889999999994 66 8888888888765  799999999998888832   233221 11111 221 11 122347


Q ss_pred             ccEEEeCCC-------chhHHHHHHhhccCCEEEEEeeecccCCCCCCCccChHHHhhcceEEEEeecccccchhHHHHH
Q 026217          122 INIYFENVG-------GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLE  194 (241)
Q Consensus       122 ~d~v~d~~g-------~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (241)
                      +|+|+....       ...+..+.++|+++|+++..+.....       ..+  ..+.+...+.+.......     ...
T Consensus       147 fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~-------~~~--~~~~~~~~~~~~~~~~~~-----~~~  212 (272)
T PRK11873        147 VDVIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRG-------ELP--EEIRNDAELYAGCVAGAL-----QEE  212 (272)
T ss_pred             eeEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccC-------CCC--HHHHHhHHHHhccccCCC-----CHH
Confidence            999985431       24688999999999999987763311       111  112222222211111110     123


Q ss_pred             HHHHHHHc-CC--ceeccceeecCCcHHHHHHHh--hcCCCcceEEEE
Q 026217          195 MMIPRIKE-GK--IVYVEDKAEGLESAPAALVGL--FSGRNVGKQVVE  237 (241)
Q Consensus       195 ~~~~~~~~-g~--~~~~~~~~~~l~~~~~a~~~l--~~~~~~gk~vv~  237 (241)
                      ++.+++.+ |.  +.......++++++.++++.+  .++...++.+..
T Consensus       213 e~~~~l~~aGf~~v~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  260 (272)
T PRK11873        213 EYLAMLAEAGFVDITIQPKREYRIPDAREFLEDWGIAPGRQLDGYIVS  260 (272)
T ss_pred             HHHHHHHHCCCCceEEEeccceecccHHHHHHHhccccccccCceEEE
Confidence            34444544 42  233444567899999999988  555545555543

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=98.71  E-value=1.3e-07  Score=71.46  Aligned_cols=80  Identities=23%  Similarity=0.404  Sum_probs=65.3

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC----CeeecCCCchhHHHHHHHHCCC--CccE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF----DEAFNYKEEPDLDAALKRYFPE--GINI  124 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~----~~~i~~~~~~~~~~~i~~~~~~--~~d~  124 (241)
                      .++.++|+||++|+|.+.++.....|++|+.++|+.++++.+.++++.    ...+|-.+..+....+......  .+|+
T Consensus         5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi   84 (246)
T COG4221           5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI   84 (246)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence            457899999999999999999999999999999999999999989983    2456666643455555555443  7999


Q ss_pred             EEeCCC
Q 026217          125 YFENVG  130 (241)
Q Consensus       125 v~d~~g  130 (241)
                      +++.+|
T Consensus        85 LvNNAG   90 (246)
T COG4221          85 LVNNAG   90 (246)
T ss_pred             EEecCC
Confidence            999998

>TIGR00518 alaDH alanine dehydrogenase

Probab=98.63  E-value=2.5e-06  Score=70.20  Aligned_cols=102  Identities=18%  Similarity=0.206  Sum_probs=73.1

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCC--
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV--  129 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~--  129 (241)
                      +.+|+|.|+ |.+|+.+++.++.+|++|+++++++++.+.+.+.++......+.+...+.+.+.     .+|++++|+  
T Consensus       167 ~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~-----~aDvVI~a~~~  240 (370)
T TIGR00518       167 PGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVK-----RADLLIGAVLI  240 (370)
T ss_pred             CceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHc-----cCCEEEEcccc
Confidence            345899996 999999999999999999999999888887764566532222222213333332     599999998  


Q ss_pred             -Cc--h--hHHHHHHhhccCCEEEEEeeecccCCC
Q 026217          130 -GG--K--MLDAVLLNMRIQGRITLCGMISQYNND  159 (241)
Q Consensus       130 -g~--~--~~~~~~~~l~~~G~~v~~g~~~~~~~~  159 (241)
                       +.  .  .....++.+++++.++.++...+.+.+
T Consensus       241 ~g~~~p~lit~~~l~~mk~g~vIvDva~d~GG~~e  275 (370)
T TIGR00518       241 PGAKAPKLVSNSLVAQMKPGAVIVDVAIDQGGCVE  275 (370)
T ss_pred             CCCCCCcCcCHHHHhcCCCCCEEEEEecCCCCCcc
Confidence             32  1  236777889999999999876655443

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=98.60  E-value=9.8e-07  Score=73.17  Aligned_cols=104  Identities=17%  Similarity=0.179  Sum_probs=78.4

Q ss_pred             HHHHHHHHHhcCCC-CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHH
Q 026217           37 MTAYAGFFEVCSPK-QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALK  115 (241)
Q Consensus        37 ~ta~~~l~~~~~~~-~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~  115 (241)
                      ..+|.++.+..++. .|++|+|.|. |.+|+.+++.++.+|++|+++.+++.+...+. ..|.. +.      ++.+.+.
T Consensus       196 ~s~~~ai~rat~~~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~-~~G~~-v~------~l~eal~  266 (425)
T PRK05476        196 ESLLDGIKRATNVLIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQAA-MDGFR-VM------TMEEAAE  266 (425)
T ss_pred             hhhHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHHHH-hcCCE-ec------CHHHHHh
Confidence            44566665543544 8999999996 99999999999999999999998887776666 55654 22      2222222


Q ss_pred             HHCCCCccEEEeCCCch-hHH-HHHHhhccCCEEEEEeeec
Q 026217          116 RYFPEGINIYFENVGGK-MLD-AVLLNMRIQGRITLCGMIS  154 (241)
Q Consensus       116 ~~~~~~~d~v~d~~g~~-~~~-~~~~~l~~~G~~v~~g~~~  154 (241)
                           ++|++++++|+. .+. ..+..+++++.++.+|...
T Consensus       267 -----~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d  302 (425)
T PRK05476        267 -----LGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFD  302 (425)
T ss_pred             -----CCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCC
Confidence                 599999999974 444 5788899999999988643

>PLN02494 adenosylhomocysteinase

Probab=98.54  E-value=1.8e-06  Score=72.00  Aligned_cols=101  Identities=15%  Similarity=0.179  Sum_probs=78.6

Q ss_pred             HHHHHHHHhcCC-CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHH
Q 026217           38 TAYAGFFEVCSP-KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKR  116 (241)
Q Consensus        38 ta~~~l~~~~~~-~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~  116 (241)
                      ..+.++.+..++ -.|++++|.|. |.+|+.+++.++.+|++|+++.+++.+...+. ..|... +      ++.+.+. 
T Consensus       239 S~~d~i~r~t~i~LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~-~~G~~v-v------~leEal~-  308 (477)
T PLN02494        239 SLPDGLMRATDVMIAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPICALQAL-MEGYQV-L------TLEDVVS-  308 (477)
T ss_pred             cHHHHHHHhcCCccCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhHHHH-hcCCee-c------cHHHHHh-
Confidence            346677666554 67999999995 99999999999999999999998877666666 566642 2      2333332 


Q ss_pred             HCCCCccEEEeCCCchh--HHHHHHhhccCCEEEEEee
Q 026217          117 YFPEGINIYFENVGGKM--LDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       117 ~~~~~~d~v~d~~g~~~--~~~~~~~l~~~G~~v~~g~  152 (241)
                          ..|++++++|+..  ....+..+++++.++.+|.
T Consensus       309 ----~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr  342 (477)
T PLN02494        309 ----EADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGH  342 (477)
T ss_pred             ----hCCEEEECCCCccchHHHHHhcCCCCCEEEEcCC
Confidence                3899999999753  4789999999999999987

>TIGR00936 ahcY adenosylhomocysteinase

Probab=98.52  E-value=2.9e-06  Score=70.03  Aligned_cols=103  Identities=18%  Similarity=0.219  Sum_probs=77.0

Q ss_pred             HHHHHHHHHhcC-CCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHH
Q 026217           37 MTAYAGFFEVCS-PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALK  115 (241)
Q Consensus        37 ~ta~~~l~~~~~-~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~  115 (241)
                      ..++.++.+..+ ..+|++|+|.|. |.+|+..++.++.+|++|+++..++.+...+. ..|.. +.      +..+.++
T Consensus       179 ~s~~~~i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~-~~G~~-v~------~leeal~  249 (406)
T TIGR00936       179 QSTIDGILRATNLLIAGKTVVVAGY-GWCGKGIAMRARGMGARVIVTEVDPIRALEAA-MDGFR-VM------TMEEAAK  249 (406)
T ss_pred             hhHHHHHHHhcCCCCCcCEEEEECC-CHHHHHHHHHHhhCcCEEEEEeCChhhHHHHH-hcCCE-eC------CHHHHHh
Confidence            345556655444 368999999995 99999999999999999999988887766666 66653 32      2222232


Q ss_pred             HHCCCCccEEEeCCCch-hHH-HHHHhhccCCEEEEEeee
Q 026217          116 RYFPEGINIYFENVGGK-MLD-AVLLNMRIQGRITLCGMI  153 (241)
Q Consensus       116 ~~~~~~~d~v~d~~g~~-~~~-~~~~~l~~~G~~v~~g~~  153 (241)
                           +.|++++++|+. .+. ..+..+++++.++.+|..
T Consensus       250 -----~aDVVItaTG~~~vI~~~~~~~mK~GailiN~G~~  284 (406)
T TIGR00936       250 -----IGDIFITATGNKDVIRGEHFENMKDGAIVANIGHF  284 (406)
T ss_pred             -----cCCEEEECCCCHHHHHHHHHhcCCCCcEEEEECCC
Confidence                 489999999974 344 478889999999998863

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PRK08324 short chain dehydrogenase; Validated

Probab=98.48  E-value=1.8e-06  Score=76.81  Aligned_cols=115  Identities=20%  Similarity=0.255  Sum_probs=72.9

Q ss_pred             ccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEE
Q 026217            3 GWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGS   82 (241)
Q Consensus         3 ~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~   82 (241)
                      ++++|..+++..++.+  +.  ++.+.+.+...         ......+|++++|+||+|++|+.+++.+...|++|+++
T Consensus       386 ~~~~~~~l~~~~~f~i--~~--~~~e~a~l~~~---------~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~  452 (681)
T PRK08324        386 AVGRYEPLSEQEAFDI--EY--WSLEQAKLQRM---------PKPKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLA  452 (681)
T ss_pred             hcCCccCCChhhhcce--ee--ehhhhhhhhcC---------CCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEE
Confidence            4566777777766666  23  33222221100         01123468999999999999999999999999999999


Q ss_pred             eCCHHHHHHHHHHcCC--C---eeecCCCchhHHHHHHHHC--CCCccEEEeCCC
Q 026217           83 AGSKDKVDLLKNKFGF--D---EAFNYKEEPDLDAALKRYF--PEGINIYFENVG  130 (241)
Q Consensus        83 ~~~~~~~~~~~~~~g~--~---~~i~~~~~~~~~~~i~~~~--~~~~d~v~d~~g  130 (241)
                      ++++++.+.+.++++.  .   ...|..+...+...+.+..  .+++|++|+++|
T Consensus       453 ~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG  507 (681)
T PRK08324        453 DLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAG  507 (681)
T ss_pred             eCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            9998887766645543  1   1234444313333333221  237999999998

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=98.45  E-value=5.8e-06  Score=65.98  Aligned_cols=93  Identities=19%  Similarity=0.270  Sum_probs=72.4

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      .+.+++|.|+ |.+|+.+++.++.+|++|++.++++++.+.++ ++|...+ ..  . ++.+.+.     ++|+||+|++
T Consensus       151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~-~~G~~~~-~~--~-~l~~~l~-----~aDiVI~t~p  219 (296)
T PRK08306        151 HGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARIT-EMGLSPF-HL--S-ELAEEVG-----KIDIIFNTIP  219 (296)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HcCCeee-cH--H-HHHHHhC-----CCCEEEECCC
Confidence            6889999996 99999999999999999999999988888888 8886532 21  1 2333332     5999999998


Q ss_pred             ch-hHHHHHHhhccCCEEEEEeeec
Q 026217          131 GK-MLDAVLLNMRIQGRITLCGMIS  154 (241)
Q Consensus       131 ~~-~~~~~~~~l~~~G~~v~~g~~~  154 (241)
                      .. .....++.+++++.++.++..+
T Consensus       220 ~~~i~~~~l~~~~~g~vIIDla~~p  244 (296)
T PRK08306        220 ALVLTKEVLSKMPPEALIIDLASKP  244 (296)
T ss_pred             hhhhhHHHHHcCCCCcEEEEEccCC
Confidence            64 3356677889999998887643

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=98.45  E-value=1.9e-06  Score=66.80  Aligned_cols=80  Identities=16%  Similarity=0.240  Sum_probs=60.6

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC-------eeecCCCchhHHHHHHH-HC-C-
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-------EAFNYKEEPDLDAALKR-YF-P-  119 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~-------~~i~~~~~~~~~~~i~~-~~-~-  119 (241)
                      ..+.+++|+||++|+|...+..+...|.+++.++|++++++.+.+++.-.       ..+|..+. +-...+.+ +. . 
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~-~~~~~l~~~l~~~~   82 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDP-EALERLEDELKERG   82 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCCh-hHHHHHHHHHHhcC
Confidence            46789999999999999999999999999999999999998887665431       23455554 33333332 22 2 


Q ss_pred             CCccEEEeCCC
Q 026217          120 EGINIYFENVG  130 (241)
Q Consensus       120 ~~~d~v~d~~g  130 (241)
                      ..+|+.+|++|
T Consensus        83 ~~IdvLVNNAG   93 (265)
T COG0300          83 GPIDVLVNNAG   93 (265)
T ss_pred             CcccEEEECCC
Confidence            27999999998

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=98.35  E-value=5.3e-06  Score=66.79  Aligned_cols=108  Identities=18%  Similarity=0.200  Sum_probs=74.5

Q ss_pred             ceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCC---CCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHH
Q 026217           14 RLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSP---KQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKV   89 (241)
Q Consensus        14 ~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~---~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~   89 (241)
                      ..+++ |+.  ++.+.+....+..+++.++......   .++.+|+|.|+ |.+|..+++.++..|. +|+++.+++++.
T Consensus       140 ~a~~~-~k~--vr~et~i~~~~~sv~~~Av~~a~~~~~~l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra  215 (311)
T cd05213         140 KAIKV-GKR--VRTETGISRGAVSISSAAVELAEKIFGNLKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERA  215 (311)
T ss_pred             HHHHH-HHH--HhhhcCCCCCCcCHHHHHHHHHHHHhCCccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHH
Confidence            35566 776  5544555566777777777433221   47899999996 9999999999998876 899999988876


Q ss_pred             HHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCchhH
Q 026217           90 DLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKML  134 (241)
Q Consensus        90 ~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~  134 (241)
                      +.+.+++|.. +++..   ++.+.+.     .+|+||.|++....
T Consensus       216 ~~la~~~g~~-~~~~~---~~~~~l~-----~aDvVi~at~~~~~  251 (311)
T cd05213         216 EELAKELGGN-AVPLD---ELLELLN-----EADVVISATGAPHY  251 (311)
T ss_pred             HHHHHHcCCe-EEeHH---HHHHHHh-----cCCEEEECCCCCch
Confidence            5444488873 33221   3333332     48999999997544

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.33  E-value=9.6e-06  Score=62.60  Aligned_cols=104  Identities=19%  Similarity=0.208  Sum_probs=69.0

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC---CCee--ecCCCchhHHHHHHHHC--CCCcc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFG---FDEA--FNYKEEPDLDAALKRYF--PEGIN  123 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g---~~~~--i~~~~~~~~~~~i~~~~--~~~~d  123 (241)
                      ++++++|+||+|++|..+++.+...|++|+++++++++.+.+.+++.   ..+.  .|..+...+...+.+..  -+++|
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   83 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID   83 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            46799999999999999999999999999999999887766632332   1122  23333312332222221  13689


Q ss_pred             EEEeCCCch------------------------hHHHHHHhhccCCEEEEEeeec
Q 026217          124 IYFENVGGK------------------------MLDAVLLNMRIQGRITLCGMIS  154 (241)
Q Consensus       124 ~v~d~~g~~------------------------~~~~~~~~l~~~G~~v~~g~~~  154 (241)
                      .++.+.|..                        .++..+++++++|+++.++...
T Consensus        84 ~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~  138 (238)
T PRK05786         84 GLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMS  138 (238)
T ss_pred             EEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecch
Confidence            999888731                        1334455566788999887643

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=98.33  E-value=4.6e-06  Score=61.27  Aligned_cols=78  Identities=18%  Similarity=0.329  Sum_probs=58.6

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC--CeeecCCCchh----HHHHHHHHCCCCccE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF--DEAFNYKEEPD----LDAALKRYFPEGINI  124 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~--~~~i~~~~~~~----~~~~i~~~~~~~~d~  124 (241)
                      .|.+|||+||++|+|+...+-...+|=+||+++|++++++.++.....  ..+.|..+. +    +.+.+++..+ ..++
T Consensus         4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~-~~~~~lvewLkk~~P-~lNv   81 (245)
T COG3967           4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADR-DSRRELVEWLKKEYP-NLNV   81 (245)
T ss_pred             cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccch-hhHHHHHHHHHhhCC-chhe
Confidence            478999999999999999999999999999999999999999843322  234454443 3    3344443322 6889


Q ss_pred             EEeCCC
Q 026217          125 YFENVG  130 (241)
Q Consensus       125 v~d~~g  130 (241)
                      +++++|
T Consensus        82 liNNAG   87 (245)
T COG3967          82 LINNAG   87 (245)
T ss_pred             eeeccc
Confidence            998887

>PRK12742 oxidoreductase; Provisional

Probab=98.31  E-value=2e-05  Score=60.75  Aligned_cols=79  Identities=19%  Similarity=0.208  Sum_probs=53.7

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHcCCCee-ecCCCchhHHHHHHHHCCCCccEEEeC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKDKVDLLKNKFGFDEA-FNYKEEPDLDAALKRYFPEGINIYFEN  128 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~-~~~~~~~~~~~~g~~~~-i~~~~~~~~~~~i~~~~~~~~d~v~d~  128 (241)
                      ++.+++|+||+|++|..+++.+...|++|+.+.+ ++++.+.+.++++...+ .|..+...+.+.+.+.  +++|+++++
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~li~~   82 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKS--GALDILVVN   82 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHh--CCCcEEEEC
Confidence            4679999999999999999999999999888764 45555555435555322 3444431233333322  369999999


Q ss_pred             CCc
Q 026217          129 VGG  131 (241)
Q Consensus       129 ~g~  131 (241)
                      +|.
T Consensus        83 ag~   85 (237)
T PRK12742         83 AGI   85 (237)
T ss_pred             CCC
Confidence            873

>PRK06182 short chain dehydrogenase; Validated

Probab=98.25  E-value=2.2e-05  Score=62.01  Aligned_cols=79  Identities=24%  Similarity=0.397  Sum_probs=57.6

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe-eecCCCchhHHHHHHHHC--CCCccEEEe
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYF--PEGINIYFE  127 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~i~~~~--~~~~d~v~d  127 (241)
                      ++.+++|+||+|++|...++.+...|++|+++++++++.+.+. ..+... ..|..+..++...+....  .+++|++++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~   80 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA-SLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVN   80 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            3578999999999999999999889999999999988877665 444432 335555423433343321  237999999


Q ss_pred             CCC
Q 026217          128 NVG  130 (241)
Q Consensus       128 ~~g  130 (241)
                      ++|
T Consensus        81 ~ag   83 (273)
T PRK06182         81 NAG   83 (273)
T ss_pred             CCC
Confidence            997

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.22  E-value=9.5e-06  Score=57.02  Aligned_cols=73  Identities=23%  Similarity=0.344  Sum_probs=55.4

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCC--eeecCCCchhHHHHHHHHCCCCccEEEe
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFD--EAFNYKEEPDLDAALKRYFPEGINIYFE  127 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~g~~--~~i~~~~~~~~~~~i~~~~~~~~d~v~d  127 (241)
                      ++.+++|.|| |++|.+++..+...|+ +|+++.|+.++.+.+.++++..  .+++++   ++.+.+.     .+|++++
T Consensus        11 ~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~---~~~~~~~-----~~DivI~   81 (135)
T PF01488_consen   11 KGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLE---DLEEALQ-----EADIVIN   81 (135)
T ss_dssp             TTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGG---GHCHHHH-----TESEEEE
T ss_pred             CCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHH---HHHHHHh-----hCCeEEE
Confidence            6789999996 9999999999999999 6999999999888887677432  233443   2333333     4999999


Q ss_pred             CCCch
Q 026217          128 NVGGK  132 (241)
Q Consensus       128 ~~g~~  132 (241)
                      |++..
T Consensus        82 aT~~~   86 (135)
T PF01488_consen   82 ATPSG   86 (135)
T ss_dssp             -SSTT
T ss_pred             ecCCC
Confidence            99864

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK08265 short chain dehydrogenase; Provisional

Probab=98.20  E-value=3.8e-05  Score=60.29  Aligned_cols=80  Identities=14%  Similarity=0.184  Sum_probs=56.7

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC-e--eecCCCchhHHHHHHHHCC--CCccEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-E--AFNYKEEPDLDAALKRYFP--EGINIY  125 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~-~--~i~~~~~~~~~~~i~~~~~--~~~d~v  125 (241)
                      .+.+++|+||+|++|...++.+...|++|+++++++++.+.+.++++.. .  ..|..+..++.+.+.....  +.+|++
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   84 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDIL   84 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            4679999999999999999999999999999999887766665465532 1  2344443233333333211  369999


Q ss_pred             EeCCC
Q 026217          126 FENVG  130 (241)
Q Consensus       126 ~d~~g  130 (241)
                      +++.|
T Consensus        85 v~~ag   89 (261)
T PRK08265         85 VNLAC   89 (261)
T ss_pred             EECCC
Confidence            99887

>PRK05993 short chain dehydrogenase; Provisional

Probab=98.19  E-value=2.4e-05  Score=61.99  Aligned_cols=79  Identities=15%  Similarity=0.293  Sum_probs=58.2

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe-eecCCCchhHHHHHH---HHCCCCccEEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALK---RYFPEGINIYF  126 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~i~---~~~~~~~d~v~  126 (241)
                      .+.+++|+||+|++|...++.+...|++|+++++++++.+.+. ..+... ..|..+..++...+.   +..++.+|+++
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li   81 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALE-AEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALF   81 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence            4578999999999999999998889999999999988888777 555432 235555423333333   23335799999


Q ss_pred             eCCC
Q 026217          127 ENVG  130 (241)
Q Consensus       127 d~~g  130 (241)
                      +++|
T Consensus        82 ~~Ag   85 (277)
T PRK05993         82 NNGA   85 (277)
T ss_pred             ECCC
Confidence            9886

>PRK05693 short chain dehydrogenase; Provisional

Probab=98.17  E-value=1.7e-05  Score=62.65  Aligned_cols=77  Identities=19%  Similarity=0.358  Sum_probs=56.8

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe-eecCCCchhHHHHHHHHC--CCCccEEEeCC
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYF--PEGINIYFENV  129 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~i~~~~--~~~~d~v~d~~  129 (241)
                      .+++|+||+|++|...++.+...|++|+++++++++.+.+. ..+... ..|..+...+.+.+....  .+++|++++++
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a   80 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALA-AAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNA   80 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence            37999999999999999999999999999999988877776 555432 245555423433333332  13799999999


Q ss_pred             C
Q 026217          130 G  130 (241)
Q Consensus       130 g  130 (241)
                      |
T Consensus        81 g   81 (274)
T PRK05693         81 G   81 (274)
T ss_pred             C
Confidence            8

>PRK05872 short chain dehydrogenase; Provisional

Probab=98.12  E-value=2.5e-05  Score=62.52  Aligned_cols=81  Identities=19%  Similarity=0.249  Sum_probs=58.2

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC-e--e--ecCCCchhHHHHHHHHCC--CCcc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-E--A--FNYKEEPDLDAALKRYFP--EGIN  123 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~-~--~--i~~~~~~~~~~~i~~~~~--~~~d  123 (241)
                      ++.+++|+||+|++|..+++.+...|++|+++++++++.+.+.++++.. .  .  .|..+..++...+.+...  +++|
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   87 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGID   87 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            5789999999999999999999999999999999988877665466531 1  1  344443233333332211  3699


Q ss_pred             EEEeCCCc
Q 026217          124 IYFENVGG  131 (241)
Q Consensus       124 ~v~d~~g~  131 (241)
                      ++++++|.
T Consensus        88 ~vI~nAG~   95 (296)
T PRK05872         88 VVVANAGI   95 (296)
T ss_pred             EEEECCCc
Confidence            99999983

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=98.12  E-value=2.5e-05  Score=65.59  Aligned_cols=104  Identities=23%  Similarity=0.288  Sum_probs=69.4

Q ss_pred             eeecCCCCCcchhhhhcCchhHHHHHHHHHhcC---CCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHH
Q 026217           16 FKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCS---PKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDL   91 (241)
Q Consensus        16 ~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~---~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~   91 (241)
                      +++ |..  +..+.+....+..+++.++.....   -.++.+|+|+|+ |.+|.++++.++..|+ +|+++.+++++.+.
T Consensus       146 ~~~-~k~--v~~~t~i~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~  221 (423)
T PRK00045        146 FSV-AKR--VRTETGIGAGAVSVASAAVELAKQIFGDLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEE  221 (423)
T ss_pred             HHH-Hhh--HhhhcCCCCCCcCHHHHHHHHHHHhhCCccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHH
Confidence            445 544  332234444466677777643322   257899999996 9999999999999998 89999999888664


Q ss_pred             HHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCch
Q 026217           92 LKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGK  132 (241)
Q Consensus        92 ~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~  132 (241)
                      +.+++|.+ +++.  . ++.+.+.     ++|+||+|+++.
T Consensus       222 la~~~g~~-~~~~--~-~~~~~l~-----~aDvVI~aT~s~  253 (423)
T PRK00045        222 LAEEFGGE-AIPL--D-ELPEALA-----EADIVISSTGAP  253 (423)
T ss_pred             HHHHcCCc-EeeH--H-HHHHHhc-----cCCEEEECCCCC
Confidence            44378753 3322  1 2322232     599999999863

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=98.10  E-value=6e-05  Score=64.72  Aligned_cols=108  Identities=14%  Similarity=0.176  Sum_probs=69.7

Q ss_pred             HHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc--------CC-----Ce--eecCCC
Q 026217           42 GFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF--------GF-----DE--AFNYKE  106 (241)
Q Consensus        42 ~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~--------g~-----~~--~i~~~~  106 (241)
                      +.-...+.+.|.+|+|+||+|++|..+++.+...|++|++++++.++.+.+.+.+        |.     ..  ..|..+
T Consensus        70 ~~~~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD  149 (576)
T PLN03209         70 AIPKELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEK  149 (576)
T ss_pred             ccccccccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCC
Confidence            3333456678999999999999999999999999999999999888765543221        21     01  223333


Q ss_pred             chhHHHHHHHHCCCCccEEEeCCCchh----------------HHHHHHhhcc--CCEEEEEeeec
Q 026217          107 EPDLDAALKRYFPEGINIYFENVGGKM----------------LDAVLLNMRI--QGRITLCGMIS  154 (241)
Q Consensus       107 ~~~~~~~i~~~~~~~~d~v~d~~g~~~----------------~~~~~~~l~~--~G~~v~~g~~~  154 (241)
                      .    +.+.+.. +++|+||+++|...                ...+++.+..  .+++|.++...
T Consensus       150 ~----esI~~aL-ggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSig  210 (576)
T PLN03209        150 P----DQIGPAL-GNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLG  210 (576)
T ss_pred             H----HHHHHHh-cCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccch
Confidence            2    2233222 36999999987420                1233343433  36899887754

>PRK06198 short chain dehydrogenase; Provisional

Probab=98.10  E-value=0.0003  Score=55.08  Aligned_cols=81  Identities=11%  Similarity=0.135  Sum_probs=53.7

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHH---HcCCC---eeecCCCchhHHHHHHHHCC--CC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKDKVDLLKN---KFGFD---EAFNYKEEPDLDAALKRYFP--EG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~-v~~~~~~~~~~~~~~~---~~g~~---~~i~~~~~~~~~~~i~~~~~--~~  121 (241)
                      .+.+++|+||+|++|..+++.+...|++ |+++++++++.+...+   ..+..   ...|..+...+.+.+.....  ++
T Consensus         5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   84 (260)
T PRK06198          5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGR   84 (260)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5678999999999999999999999997 9999988765543221   23332   12355443123332322211  36


Q ss_pred             ccEEEeCCCc
Q 026217          122 INIYFENVGG  131 (241)
Q Consensus       122 ~d~v~d~~g~  131 (241)
                      +|.++++.|.
T Consensus        85 id~li~~ag~   94 (260)
T PRK06198         85 LDALVNAAGL   94 (260)
T ss_pred             CCEEEECCCc
Confidence            9999999973

>PRK07109 short chain dehydrogenase; Provisional

Probab=98.08  E-value=8.4e-05  Score=60.60  Aligned_cols=81  Identities=20%  Similarity=0.192  Sum_probs=55.9

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCCe---eecCCCchhHHHHHHHHCC--CCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDE---AFNYKEEPDLDAALKRYFP--EGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~---~g~~~---~i~~~~~~~~~~~i~~~~~--~~~  122 (241)
                      ++.+++|+||+|++|..+++.+...|++|+++++++++.+.+.++   .|...   ..|..+..++...+.....  +++
T Consensus         7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i   86 (334)
T PRK07109          7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPI   86 (334)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence            467899999999999999999999999999999988776654423   34321   2354443233333222211  379


Q ss_pred             cEEEeCCCc
Q 026217          123 NIYFENVGG  131 (241)
Q Consensus       123 d~v~d~~g~  131 (241)
                      |++++++|.
T Consensus        87 D~lInnAg~   95 (334)
T PRK07109         87 DTWVNNAMV   95 (334)
T ss_pred             CEEEECCCc
Confidence            999999873

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=98.08  E-value=8.9e-05  Score=62.19  Aligned_cols=101  Identities=19%  Similarity=0.215  Sum_probs=74.7

Q ss_pred             HHHHHHHhcC-CCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHH
Q 026217           39 AYAGFFEVCS-PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRY  117 (241)
Q Consensus        39 a~~~l~~~~~-~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~  117 (241)
                      .+.++.+..+ .-.|.+++|.|. |.+|..+++.++.+|++|+++.+++.+...+. ..|+.. .      ++.+.++  
T Consensus       240 ~~d~~~R~~~~~LaGKtVgVIG~-G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~-~~G~~~-~------~leell~--  308 (476)
T PTZ00075        240 LIDGIFRATDVMIAGKTVVVCGY-GDVGKGCAQALRGFGARVVVTEIDPICALQAA-MEGYQV-V------TLEDVVE--  308 (476)
T ss_pred             HHHHHHHhcCCCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhHHHHH-hcCcee-c------cHHHHHh--
Confidence            3355545433 457999999995 99999999999999999999987766655555 456532 1      3333332  


Q ss_pred             CCCCccEEEeCCCch-hH-HHHHHhhccCCEEEEEeee
Q 026217          118 FPEGINIYFENVGGK-ML-DAVLLNMRIQGRITLCGMI  153 (241)
Q Consensus       118 ~~~~~d~v~d~~g~~-~~-~~~~~~l~~~G~~v~~g~~  153 (241)
                         .+|+|+.++|.. .+ ...+..+++++.++.+|..
T Consensus       309 ---~ADIVI~atGt~~iI~~e~~~~MKpGAiLINvGr~  343 (476)
T PTZ00075        309 ---TADIFVTATGNKDIITLEHMRRMKNNAIVGNIGHF  343 (476)
T ss_pred             ---cCCEEEECCCcccccCHHHHhccCCCcEEEEcCCC
Confidence               499999999964 34 4788999999999998864

>PRK06057 short chain dehydrogenase; Provisional

Probab=98.07  E-value=4.1e-05  Score=59.81  Aligned_cols=80  Identities=15%  Similarity=0.182  Sum_probs=56.6

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC-eeecCCCchhHHHHHHHHC--CCCccEEEe
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEPDLDAALKRYF--PEGINIYFE  127 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~-~~i~~~~~~~~~~~i~~~~--~~~~d~v~d  127 (241)
                      ++.+++|+||+|++|..+++.+...|++|+++++++.+.+...++++.. ...|..+...+...+.+..  .+++|+++.
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   85 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFN   85 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            5789999999999999999999999999999999888776665355442 2234444312333333221  136899999


Q ss_pred             CCC
Q 026217          128 NVG  130 (241)
Q Consensus       128 ~~g  130 (241)
                      ++|
T Consensus        86 ~ag   88 (255)
T PRK06057         86 NAG   88 (255)
T ss_pred             CCC
Confidence            887

>PRK06139 short chain dehydrogenase; Provisional

Probab=98.04  E-value=3.1e-05  Score=62.94  Aligned_cols=79  Identities=18%  Similarity=0.344  Sum_probs=56.0

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCCe---eecCCCchhHH---HHHHHHCCCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDE---AFNYKEEPDLD---AALKRYFPEG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~---~~g~~~---~i~~~~~~~~~---~~i~~~~~~~  121 (241)
                      ++.+++|+||+|++|.++++.+...|++|+++++++++.+.+.+   +.|...   ..|..+..++.   +.+.+. .++
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g~   84 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASF-GGR   84 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHh-cCC
Confidence            46799999999999999999999999999999999887765542   334432   23444431222   222222 247


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|++++++|
T Consensus        85 iD~lVnnAG   93 (330)
T PRK06139         85 IDVWVNNVG   93 (330)
T ss_pred             CCEEEECCC
Confidence            999999997

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=98.03  E-value=4.7e-05  Score=59.80  Aligned_cols=80  Identities=16%  Similarity=0.241  Sum_probs=56.9

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC---eeecCCCchhHHHHHHHHC--CCCccEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEPDLDAALKRYF--PEGINIY  125 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~---~~i~~~~~~~~~~~i~~~~--~~~~d~v  125 (241)
                      ++.+++|+||++++|..+++.+...|++|+++++++++.+.+.++++..   ...|..+..++...+.+..  -+.+|++
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   84 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF   84 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            4678999999999999999999999999999999988877776455431   1224444313333333321  1379999


Q ss_pred             EeCCC
Q 026217          126 FENVG  130 (241)
Q Consensus       126 ~d~~g  130 (241)
                      ++++|
T Consensus        85 i~~ag   89 (263)
T PRK06200         85 VGNAG   89 (263)
T ss_pred             EECCC
Confidence            99987

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=98.03  E-value=0.00014  Score=53.78  Aligned_cols=92  Identities=18%  Similarity=0.220  Sum_probs=63.7

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe-eecCCCchhHHHHHHHHCCCCccEEEeCCCc--
Q 026217           55 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFENVGG--  131 (241)
Q Consensus        55 vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~--  131 (241)
                      |+|+||+|.+|...++.+...|.+|++++|++++.+.   ..+++. ..|..+...+.+.+    . ++|.||.+.|.  
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---~~~~~~~~~d~~d~~~~~~al----~-~~d~vi~~~~~~~   72 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---SPGVEIIQGDLFDPDSVKAAL----K-GADAVIHAAGPPP   72 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---CTTEEEEESCTTCHHHHHHHH----T-TSSEEEECCHSTT
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---ccccccceeeehhhhhhhhhh----h-hcchhhhhhhhhc
Confidence            7899999999999999999999999999999887775   223322 22333321222222    2 59999999983  


Q ss_pred             ---hhHHHHHHhhccCC--EEEEEeeec
Q 026217          132 ---KMLDAVLLNMRIQG--RITLCGMIS  154 (241)
Q Consensus       132 ---~~~~~~~~~l~~~G--~~v~~g~~~  154 (241)
                         ......++.++..|  +++.++...
T Consensus        73 ~~~~~~~~~~~a~~~~~~~~~v~~s~~~  100 (183)
T PF13460_consen   73 KDVDAAKNIIEAAKKAGVKRVVYLSSAG  100 (183)
T ss_dssp             THHHHHHHHHHHHHHTTSSEEEEEEETT
T ss_pred             ccccccccccccccccccccceeeeccc
Confidence               34555566565443  788777644

...

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=98.01  E-value=5.5e-05  Score=59.40  Aligned_cols=80  Identities=20%  Similarity=0.214  Sum_probs=56.1

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC-e--eecCCCchhHHHHHHHHCC--CCccEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-E--AFNYKEEPDLDAALKRYFP--EGINIY  125 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~-~--~i~~~~~~~~~~~i~~~~~--~~~d~v  125 (241)
                      ++.+++|+||+|++|..+++.+...|++|+++++++++.+.+.+..+.. .  ..|..+..+..+.+.+...  +++|++
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   83 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL   83 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence            4689999999999999999999999999999999888777776333321 1  2244433133333333221  369999


Q ss_pred             EeCCC
Q 026217          126 FENVG  130 (241)
Q Consensus       126 ~d~~g  130 (241)
                      +++.|
T Consensus        84 i~~Ag   88 (262)
T TIGR03325        84 IPNAG   88 (262)
T ss_pred             EECCC
Confidence            99986

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=98.00  E-value=0.0001  Score=54.89  Aligned_cols=110  Identities=18%  Similarity=0.289  Sum_probs=76.0

Q ss_pred             hcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCCee-ecCCC
Q 026217           31 ILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDEA-FNYKE  106 (241)
Q Consensus        31 ~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~---~~g~~~~-i~~~~  106 (241)
                      ++..+.+.|.  +.+...++++++||-+|  +|.|..++-+++..+ +|+.+.+.++=.+.+++   .+|...+ +...+
T Consensus        54 tis~P~~vA~--m~~~L~~~~g~~VLEIG--tGsGY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gD  128 (209)
T COG2518          54 TISAPHMVAR--MLQLLELKPGDRVLEIG--TGSGYQAAVLARLVG-RVVSIERIEELAEQARRNLETLGYENVTVRHGD  128 (209)
T ss_pred             eecCcHHHHH--HHHHhCCCCCCeEEEEC--CCchHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECC
Confidence            4444445554  33667999999999999  788999999999888 99999987763333321   6777432 22222


Q ss_pred             chhHHHHHHHHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEe
Q 026217          107 EPDLDAALKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       107 ~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g  151 (241)
                      .      -..+... .+|.++-+.+. ..-...++.|+++|+++..-
T Consensus       129 G------~~G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~Pv  169 (209)
T COG2518         129 G------SKGWPEEAPYDRIIVTAAAPEVPEALLDQLKPGGRLVIPV  169 (209)
T ss_pred             c------ccCCCCCCCcCEEEEeeccCCCCHHHHHhcccCCEEEEEE
Confidence            1      1122233 89988877775 55578899999999998753

>PRK07060 short chain dehydrogenase; Provisional

Probab=98.00  E-value=9.9e-05  Score=57.18  Aligned_cols=79  Identities=19%  Similarity=0.219  Sum_probs=56.7

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe-eecCCCchhHHHHHHHHCCCCccEEEeCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFENV  129 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~i~~~~~~~~d~v~d~~  129 (241)
                      ++.+++|+||+|++|...++.+...|++|+++++++++.+.+.+..+... ..|..+. +......+. .+++|++|++.
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~-~~~~d~vi~~a   85 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDD-AAIRAALAA-AGAFDGLVNCA   85 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCH-HHHHHHHHH-hCCCCEEEECC
Confidence            56789999999999999999999999999999998887766663555432 2355443 222222222 13699999998


Q ss_pred             Cc
Q 026217          130 GG  131 (241)
Q Consensus       130 g~  131 (241)
                      |.
T Consensus        86 g~   87 (245)
T PRK07060         86 GI   87 (245)
T ss_pred             CC
Confidence            73

>PRK12829 short chain dehydrogenase; Provisional

Probab=97.99  E-value=6.5e-05  Score=58.90  Aligned_cols=84  Identities=13%  Similarity=0.217  Sum_probs=57.2

Q ss_pred             CCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC----eeecCCCchhHHHHHHHHCC--CC
Q 026217           48 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD----EAFNYKEEPDLDAALKRYFP--EG  121 (241)
Q Consensus        48 ~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~----~~i~~~~~~~~~~~i~~~~~--~~  121 (241)
                      ..-++.+++|+||+|++|..+++.+...|++|++++++++..+.+.+.....    ...|..+...+...+.+..+  ++
T Consensus         7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   86 (264)
T PRK12829          7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGG   86 (264)
T ss_pred             hccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            3357789999999999999999999999999999999877666655233221    22344443223222222211  36


Q ss_pred             ccEEEeCCCc
Q 026217          122 INIYFENVGG  131 (241)
Q Consensus       122 ~d~v~d~~g~  131 (241)
                      +|+|+.+.|.
T Consensus        87 ~d~vi~~ag~   96 (264)
T PRK12829         87 LDVLVNNAGI   96 (264)
T ss_pred             CCEEEECCCC
Confidence            9999998873

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.99  E-value=0.00099  Score=53.01  Aligned_cols=91  Identities=19%  Similarity=0.261  Sum_probs=67.3

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      .|.+++|.|. |.+|.++++.++.+|++|++..+++++.+.+. +.|.. .+.+  . ++.+.+.     .+|+|++++.
T Consensus       150 ~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~-~~g~~-~~~~--~-~l~~~l~-----~aDiVint~P  218 (287)
T TIGR02853       150 HGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARIT-EMGLI-PFPL--N-KLEEKVA-----EIDIVINTIP  218 (287)
T ss_pred             CCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCe-eecH--H-HHHHHhc-----cCCEEEECCC
Confidence            4789999996 99999999999999999999999988777776 66653 2211  1 3333332     5999999997


Q ss_pred             chh-HHHHHHhhccCCEEEEEee
Q 026217          131 GKM-LDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       131 ~~~-~~~~~~~l~~~G~~v~~g~  152 (241)
                      ... ....+..++++..++.++.
T Consensus       219 ~~ii~~~~l~~~k~~aliIDlas  241 (287)
T TIGR02853       219 ALVLTADVLSKLPKHAVIIDLAS  241 (287)
T ss_pred             hHHhCHHHHhcCCCCeEEEEeCc
Confidence            543 2456677888777777766

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK07825 short chain dehydrogenase; Provisional

Probab=97.98  E-value=6.4e-05  Score=59.35  Aligned_cols=79  Identities=14%  Similarity=0.199  Sum_probs=55.7

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC-CC-eeecCCCchhHHHHHHHHCC--CCccEEEe
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFG-FD-EAFNYKEEPDLDAALKRYFP--EGINIYFE  127 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g-~~-~~i~~~~~~~~~~~i~~~~~--~~~d~v~d  127 (241)
                      +.+++|+||+|++|...++.+...|++|+++++++++.+.+.+.++ .. ...|..+..++...+.....  +++|++++
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~   84 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVN   84 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            5689999999999999999888899999999999888766653554 22 12355543233322322211  37999999


Q ss_pred             CCC
Q 026217          128 NVG  130 (241)
Q Consensus       128 ~~g  130 (241)
                      ++|
T Consensus        85 ~ag   87 (273)
T PRK07825         85 NAG   87 (273)
T ss_pred             CCC
Confidence            987

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=97.96  E-value=5e-05  Score=51.35  Aligned_cols=95  Identities=19%  Similarity=0.302  Sum_probs=64.5

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHc---CCCeeecCCCchhHHHHHHHHCCCCccEEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKL-VGCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEPDLDAALKRYFPEGINIYF  126 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~-~g~~v~~~~~~~~~~~~~~~~~---g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~  126 (241)
                      |+.+||-.|  .|.|..++.+++. .+++|++++.+++-.+.+++..   +...-+..... ++  .......+++|+|+
T Consensus         1 p~~~vLDlG--cG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~-d~--~~~~~~~~~~D~v~   75 (112)
T PF12847_consen    1 PGGRVLDLG--CGTGRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQG-DA--EFDPDFLEPFDLVI   75 (112)
T ss_dssp             TTCEEEEET--TTTSHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEES-CC--HGGTTTSSCEEEEE
T ss_pred             CCCEEEEEc--CcCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEC-cc--ccCcccCCCCCEEE
Confidence            688999998  5668888888884 6889999999999998888655   22111111111 33  11111223799999


Q ss_pred             eCC-Cc----h------hHHHHHHhhccCCEEEEE
Q 026217          127 ENV-GG----K------MLDAVLLNMRIQGRITLC  150 (241)
Q Consensus       127 d~~-g~----~------~~~~~~~~l~~~G~~v~~  150 (241)
                      ... ..    .      .++.+.+.|+|+|+++.-
T Consensus        76 ~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi~  110 (112)
T PF12847_consen   76 CSGFTLHFLLPLDERRRVLERIRRLLKPGGRLVIN  110 (112)
T ss_dssp             ECSGSGGGCCHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ECCCccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence            877 21    1      267788899999998863

...

>PRK06484 short chain dehydrogenase; Validated

Probab=97.96  E-value=0.00015  Score=62.68  Aligned_cols=105  Identities=15%  Similarity=0.181  Sum_probs=71.9

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe---eecCCCchhHHHHHHHHCC--CCccEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGINIY  125 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~---~i~~~~~~~~~~~i~~~~~--~~~d~v  125 (241)
                      .+.+++|+||++++|+..++.+...|++|+++++++++.+.+.++++...   ..|..+..++...+.....  +.+|++
T Consensus       268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l  347 (520)
T PRK06484        268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDVL  347 (520)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            46789999999999999999999999999999999888877775565431   2344443233333333221  369999


Q ss_pred             EeCCCch----h-----------------------HHHHHHhhccCCEEEEEeeecc
Q 026217          126 FENVGGK----M-----------------------LDAVLLNMRIQGRITLCGMISQ  155 (241)
Q Consensus       126 ~d~~g~~----~-----------------------~~~~~~~l~~~G~~v~~g~~~~  155 (241)
                      ++++|..    .                       .+.++..++.+|+++.++...+
T Consensus       348 i~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~  404 (520)
T PRK06484        348 VNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIAS  404 (520)
T ss_pred             EECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhh
Confidence            9988731    0                       1223344555789998877544

>PLN02780 ketoreductase/ oxidoreductase

Probab=97.96  E-value=6e-05  Score=61.03  Aligned_cols=79  Identities=15%  Similarity=0.251  Sum_probs=55.7

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----CC-C---eeecCCC--chhHHHHHHHHCCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF----GF-D---EAFNYKE--EPDLDAALKRYFPE  120 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~----g~-~---~~i~~~~--~~~~~~~i~~~~~~  120 (241)
                      .|.+++|+||++++|.+.++.+...|++|+.+++++++.+.+.+++    +. .   ...|..+  . +..+.+.+..++
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~-~~~~~l~~~~~~  130 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDID-EGVKRIKETIEG  130 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcH-HHHHHHHHHhcC
Confidence            4789999999999999988888888999999999998876654332    11 1   1234332  2 334445444444


Q ss_pred             -CccEEEeCCC
Q 026217          121 -GINIYFENVG  130 (241)
Q Consensus       121 -~~d~v~d~~g  130 (241)
                       .+|++++++|
T Consensus       131 ~didilVnnAG  141 (320)
T PLN02780        131 LDVGVLINNVG  141 (320)
T ss_pred             CCccEEEEecC
Confidence             6779999887

>PRK07806 short chain dehydrogenase; Provisional

Probab=97.96  E-value=0.00023  Score=55.28  Aligned_cols=102  Identities=18%  Similarity=0.212  Sum_probs=62.8

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHH---cCCC---eeecCCCchhHHHHHHHHCC--CC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD-KVDLLKNK---FGFD---EAFNYKEEPDLDAALKRYFP--EG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~-~~~~~~~~---~g~~---~~i~~~~~~~~~~~i~~~~~--~~  121 (241)
                      ++.+++|+||+|++|...++.+...|.+|++++++.+ ..+.+.++   .+..   ...|..+..++...+.+...  ++
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG   84 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            4578999999999999999998889999999887643 33322212   2321   12344443233333332221  36


Q ss_pred             ccEEEeCCCch--------------------hHHHHHHhhccCCEEEEEee
Q 026217          122 INIYFENVGGK--------------------MLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       122 ~d~v~d~~g~~--------------------~~~~~~~~l~~~G~~v~~g~  152 (241)
                      +|+++.++|..                    .++.+.+.+..+|+++.++.
T Consensus        85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS  135 (248)
T PRK07806         85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTS  135 (248)
T ss_pred             CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeC
Confidence            99999887631                    12334444455688888866

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=97.95  E-value=0.00021  Score=52.72  Aligned_cols=89  Identities=21%  Similarity=0.259  Sum_probs=64.7

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCC
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV  129 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~  129 (241)
                      -.|.+|.|+| .|.+|+..+++++.+|++|++.+++.+..+... ..+..    +.   ++.+.+..     +|+|+.+.
T Consensus        34 l~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~-~~~~~----~~---~l~ell~~-----aDiv~~~~   99 (178)
T PF02826_consen   34 LRGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEEGAD-EFGVE----YV---SLDELLAQ-----ADIVSLHL   99 (178)
T ss_dssp             STTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHH-HTTEE----ES---SHHHHHHH------SEEEE-S
T ss_pred             cCCCEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChhhhcc-cccce----ee---ehhhhcch-----hhhhhhhh
Confidence            4689999999 599999999999999999999998877766444 45432    11   45555554     89999887


Q ss_pred             Cc-h-----hHHHHHHhhccCCEEEEEee
Q 026217          130 GG-K-----MLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       130 g~-~-----~~~~~~~~l~~~G~~v~~g~  152 (241)
                      .. +     .-...+..++++..+|.++.
T Consensus       100 plt~~T~~li~~~~l~~mk~ga~lvN~aR  128 (178)
T PF02826_consen  100 PLTPETRGLINAEFLAKMKPGAVLVNVAR  128 (178)
T ss_dssp             SSSTTTTTSBSHHHHHTSTTTEEEEESSS
T ss_pred             ccccccceeeeeeeeeccccceEEEeccc
Confidence            62 2     23567888999888888754

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed

Probab=97.95  E-value=0.00022  Score=55.69  Aligned_cols=91  Identities=16%  Similarity=0.215  Sum_probs=61.4

Q ss_pred             CCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC--CccEE
Q 026217           49 PKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE--GINIY  125 (241)
Q Consensus        49 ~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~--~~d~v  125 (241)
                      +.++++||-.| +|+ |..++.+++ .|+ +|++++.++...+.+++.+....+ .. .- .       ...+  .+|+|
T Consensus       117 ~~~~~~VLDiG-cGs-G~l~i~~~~-~g~~~v~giDis~~~l~~A~~n~~~~~~-~~-~~-~-------~~~~~~~fD~V  183 (250)
T PRK00517        117 VLPGKTVLDVG-CGS-GILAIAAAK-LGAKKVLAVDIDPQAVEAARENAELNGV-EL-NV-Y-------LPQGDLKADVI  183 (250)
T ss_pred             cCCCCEEEEeC-CcH-HHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCC-Cc-eE-E-------EccCCCCcCEE
Confidence            56899999999 355 887776544 666 699999999988888743321111 00 00 0       0111  59999


Q ss_pred             EeCCCch----hHHHHHHhhccCCEEEEEee
Q 026217          126 FENVGGK----MLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       126 ~d~~g~~----~~~~~~~~l~~~G~~v~~g~  152 (241)
                      +......    .+..+.+.|+++|.++..|.
T Consensus       184 vani~~~~~~~l~~~~~~~LkpgG~lilsgi  214 (250)
T PRK00517        184 VANILANPLLELAPDLARLLKPGGRLILSGI  214 (250)
T ss_pred             EEcCcHHHHHHHHHHHHHhcCCCcEEEEEEC
Confidence            8766542    45678888999999998765

>PRK08339 short chain dehydrogenase; Provisional

Probab=97.94  E-value=0.00012  Score=57.61  Aligned_cols=80  Identities=20%  Similarity=0.315  Sum_probs=55.5

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----CCC---eeecCCCchhHHHHHHHHC-CCCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF----GFD---EAFNYKEEPDLDAALKRYF-PEGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~----g~~---~~i~~~~~~~~~~~i~~~~-~~~~  122 (241)
                      .+.+++|+||++++|+++++.+...|++|+++++++++.+.+.+++    +..   ...|..+..++...+.+.. -+++
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i   86 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEP   86 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence            4778999999999999999999999999999999887766555333    321   1234444323333333221 1479


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |++++++|
T Consensus        87 D~lv~nag   94 (263)
T PRK08339         87 DIFFFSTG   94 (263)
T ss_pred             cEEEECCC
Confidence            99999987

>PRK08017 oxidoreductase; Provisional

Probab=97.94  E-value=7.1e-05  Score=58.41  Aligned_cols=77  Identities=17%  Similarity=0.281  Sum_probs=56.6

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe-eecCCCchhH---HHHHHHHCCCCccEEEeC
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDL---DAALKRYFPEGINIYFEN  128 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~---~~~i~~~~~~~~d~v~d~  128 (241)
                      .+++|+||+|++|..+++.+...|++|+++++++++.+.++ ..+... ..|..+...+   .+.+.....+.+|.++.+
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~   81 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMN-SLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN   81 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHH-hCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence            47999999999999999999999999999999998888777 666543 2344443122   233333334578999988


Q ss_pred             CC
Q 026217          129 VG  130 (241)
Q Consensus       129 ~g  130 (241)
                      .|
T Consensus        82 ag   83 (256)
T PRK08017         82 AG   83 (256)
T ss_pred             CC
Confidence            76

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.93  E-value=0.00017  Score=56.60  Aligned_cols=105  Identities=19%  Similarity=0.275  Sum_probs=69.3

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCCe-e----ecCCCchhHHHHHHHHC--CC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDE-A----FNYKEEPDLDAALKRYF--PE  120 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~---~~g~~~-~----i~~~~~~~~~~~i~~~~--~~  120 (241)
                      .+..|+|+||++|+|.+.+.-..+.|++++.+++...+++.+.+   +.+... +    .|-.+..+..+.+.+..  -|
T Consensus        11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg   90 (282)
T KOG1205|consen   11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFG   90 (282)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcC
Confidence            57889999999999999888888899988888888777666622   233322 2    23333313333332221  24


Q ss_pred             CccEEEeCCCch-----------h---------------HHHHHHhhcc-C-CEEEEEeeecc
Q 026217          121 GINIYFENVGGK-----------M---------------LDAVLLNMRI-Q-GRITLCGMISQ  155 (241)
Q Consensus       121 ~~d~v~d~~g~~-----------~---------------~~~~~~~l~~-~-G~~v~~g~~~~  155 (241)
                      ++|+.+|.+|-.           .               .+.++..|++ + |+++.+++..+
T Consensus        91 ~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG  153 (282)
T KOG1205|consen   91 RVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAG  153 (282)
T ss_pred             CCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEecccc
Confidence            899999988721           1               2445566665 3 99999987655

>PRK07576 short chain dehydrogenase; Provisional

Probab=97.93  E-value=6.9e-05  Score=58.94  Aligned_cols=80  Identities=18%  Similarity=0.236  Sum_probs=54.3

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC---eeecCCCchhHHHHHHHHC--CCCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEPDLDAALKRYF--PEGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~~i~~~~~~~~~~~i~~~~--~~~~  122 (241)
                      ++.+++|+||+|++|...++.+...|++|+++++++++.+...+++   +..   ...|..+..++...+.+..  .+++
T Consensus         8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~i   87 (264)
T PRK07576          8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPI   87 (264)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999999999999998877654443232   221   1234444323333333332  1368


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |+++++.|
T Consensus        88 D~vi~~ag   95 (264)
T PRK07576         88 DVLVSGAA   95 (264)
T ss_pred             CEEEECCC
Confidence            99998875

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.92  E-value=0.00024  Score=60.41  Aligned_cols=80  Identities=18%  Similarity=0.262  Sum_probs=53.4

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHHHHcCCCe-eecCCCchhHHHHHHHHC--CCCccEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK--DKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYF--PEGINIY  125 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~--~~~~~~~~~~g~~~-~i~~~~~~~~~~~i~~~~--~~~~d~v  125 (241)
                      ++.+++|+||+|++|...++.+...|++|++++++.  ++.+.+.++++... ..|..+.......+....  .+++|++
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~v  288 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDIV  288 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            578999999999999999999999999999988642  33344433555432 335554412222222221  1369999


Q ss_pred             EeCCC
Q 026217          126 FENVG  130 (241)
Q Consensus       126 ~d~~g  130 (241)
                      |+++|
T Consensus       289 i~~AG  293 (450)
T PRK08261        289 VHNAG  293 (450)
T ss_pred             EECCC
Confidence            99998

>PRK06500 short chain dehydrogenase; Provisional

Probab=97.92  E-value=0.00011  Score=57.07  Aligned_cols=79  Identities=15%  Similarity=0.232  Sum_probs=55.3

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe---eecCCCchhHH---HHHHHHCCCCccE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLD---AALKRYFPEGINI  124 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~---~i~~~~~~~~~---~~i~~~~~~~~d~  124 (241)
                      ++.+++|+||+|++|...++.+...|++|+++++++++.+.+.++++...   ..|..+..+..   +.+.+.. +++|+
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id~   83 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAF-GRLDA   83 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh-CCCCE
Confidence            46789999999999999999999999999999988777666654666431   12333321222   2222221 36999


Q ss_pred             EEeCCC
Q 026217          125 YFENVG  130 (241)
Q Consensus       125 v~d~~g  130 (241)
                      +++++|
T Consensus        84 vi~~ag   89 (249)
T PRK06500         84 VFINAG   89 (249)
T ss_pred             EEECCC
Confidence            999887

>PRK07062 short chain dehydrogenase; Provisional

Probab=97.91  E-value=8.8e-05  Score=58.30  Aligned_cols=80  Identities=15%  Similarity=0.213  Sum_probs=54.8

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----CCCe----eecCCCchhHHHHHHHHC--CC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF----GFDE----AFNYKEEPDLDAALKRYF--PE  120 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~----g~~~----~i~~~~~~~~~~~i~~~~--~~  120 (241)
                      .+.+++|+||++++|.+.++.+...|++|+++++++++.+.+.+++    +...    ..|..+..++...+.+..  -+
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   86 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG   86 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            4679999999999999999999999999999999887765544232    1111    224444313333333222  13


Q ss_pred             CccEEEeCCC
Q 026217          121 GINIYFENVG  130 (241)
Q Consensus       121 ~~d~v~d~~g  130 (241)
                      ++|++++++|
T Consensus        87 ~id~li~~Ag   96 (265)
T PRK07062         87 GVDMLVNNAG   96 (265)
T ss_pred             CCCEEEECCC
Confidence            6999999997

>PRK12939 short chain dehydrogenase; Provisional

Probab=97.91  E-value=0.0002  Score=55.62  Aligned_cols=81  Identities=16%  Similarity=0.183  Sum_probs=54.5

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC---eeecCCCchhHHHHHHHHCC--CCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEPDLDAALKRYFP--EGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~~i~~~~~~~~~~~i~~~~~--~~~  122 (241)
                      ++.+++|+||+|++|...+..+...|++|+++++++++.+.+.+++   +..   ...|..+..++...+.+...  +++
T Consensus         6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   85 (250)
T PRK12939          6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL   85 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4688999999999999999999999999999998877655443232   322   12344443223222222211  379


Q ss_pred             cEEEeCCCc
Q 026217          123 NIYFENVGG  131 (241)
Q Consensus       123 d~v~d~~g~  131 (241)
                      |+++.++|.
T Consensus        86 d~vi~~ag~   94 (250)
T PRK12939         86 DGLVNNAGI   94 (250)
T ss_pred             CEEEECCCC
Confidence            999999873

>PRK05866 short chain dehydrogenase; Provisional

Probab=97.91  E-value=7.8e-05  Score=59.62  Aligned_cols=81  Identities=22%  Similarity=0.351  Sum_probs=54.8

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC-e--eecCCCchhHHHHHHHHC--CCCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYF--PEGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~--~i~~~~~~~~~~~i~~~~--~~~~  122 (241)
                      .+.+++|+||+|++|.+.++.+...|++|+++++++++.+.+.+++   +.. .  ..|..+..++.+.+....  -+++
T Consensus        39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i  118 (293)
T PRK05866         39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGV  118 (293)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            3578999999999999999998889999999999987766554332   322 1  234444313333333221  1379


Q ss_pred             cEEEeCCCc
Q 026217          123 NIYFENVGG  131 (241)
Q Consensus       123 d~v~d~~g~  131 (241)
                      |++++++|.
T Consensus       119 d~li~~AG~  127 (293)
T PRK05866        119 DILINNAGR  127 (293)
T ss_pred             CEEEECCCC
Confidence            999999873

>PRK07063 short chain dehydrogenase; Provisional

Probab=97.88  E-value=9.6e-05  Score=57.89  Aligned_cols=80  Identities=13%  Similarity=0.135  Sum_probs=54.7

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC-----CC---eeecCCCchhHHHHHHHHC--CC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFG-----FD---EAFNYKEEPDLDAALKRYF--PE  120 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g-----~~---~~i~~~~~~~~~~~i~~~~--~~  120 (241)
                      .+.+++|+||++++|..+++.+...|++|+++++++++.+.+.+++.     ..   ...|..+..++...+....  -+
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   85 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFG   85 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            46789999999999999999999999999999998877665543432     11   1224444313333333221  13


Q ss_pred             CccEEEeCCC
Q 026217          121 GINIYFENVG  130 (241)
Q Consensus       121 ~~d~v~d~~g  130 (241)
                      ++|++++++|
T Consensus        86 ~id~li~~ag   95 (260)
T PRK07063         86 PLDVLVNNAG   95 (260)
T ss_pred             CCcEEEECCC
Confidence            7999999987

>PRK08177 short chain dehydrogenase; Provisional

Probab=97.88  E-value=0.00012  Score=56.15  Aligned_cols=77  Identities=18%  Similarity=0.207  Sum_probs=54.3

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC--eeecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD--EAFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~--~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      .+++|+||+|++|...++.+...|++|+++++++++.+.++ +++..  ...|..+..++.+.+....++++|+++.++|
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag   80 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQ-ALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG   80 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHH-hccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence            46999999999999999888889999999999887766665 44322  1234444413333333343347999999876

>PRK05867 short chain dehydrogenase; Provisional

Probab=97.88  E-value=9.6e-05  Score=57.68  Aligned_cols=80  Identities=21%  Similarity=0.295  Sum_probs=55.5

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC---eeecCCCchhHHHHHHHHCC--CCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEPDLDAALKRYFP--EGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~~i~~~~~~~~~~~i~~~~~--~~~  122 (241)
                      .+.+++|+||++++|.++++.+...|++|+++++++++.+.+.+++   +..   ...|..+..++.+.+.+...  +++
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   87 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGI   87 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            4789999999999999999999999999999999887766554333   221   12344443233333332211  379


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |+++++.|
T Consensus        88 d~lv~~ag   95 (253)
T PRK05867         88 DIAVCNAG   95 (253)
T ss_pred             CEEEECCC
Confidence            99999887

>PRK06196 oxidoreductase; Provisional

Probab=97.87  E-value=0.00013  Score=58.87  Aligned_cols=80  Identities=16%  Similarity=0.232  Sum_probs=55.4

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC-CC-eeecCCCchhHHHHHHHHCC--CCccEEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFG-FD-EAFNYKEEPDLDAALKRYFP--EGINIYF  126 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g-~~-~~i~~~~~~~~~~~i~~~~~--~~~d~v~  126 (241)
                      .+.+++|+||+|++|.++++.+...|++|+++++++++.+.+.+++. .. ...|..+..++...+.+...  +++|+++
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li  104 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILI  104 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            46799999999999999999888899999999998877665543332 21 12344443233333333222  3799999


Q ss_pred             eCCC
Q 026217          127 ENVG  130 (241)
Q Consensus       127 d~~g  130 (241)
                      +++|
T Consensus       105 ~nAg  108 (315)
T PRK06196        105 NNAG  108 (315)
T ss_pred             ECCC
Confidence            9987

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.87  E-value=0.0003  Score=52.31  Aligned_cols=81  Identities=16%  Similarity=0.296  Sum_probs=61.4

Q ss_pred             CCcEEEEEc-CCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC-eeecCCCc---hhHHHHHHHHCCCCccEE
Q 026217           51 QGEYVFVSA-ASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEE---PDLDAALKRYFPEGINIY  125 (241)
Q Consensus        51 ~~~~vlI~g-a~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~-~~i~~~~~---~~~~~~i~~~~~~~~d~v  125 (241)
                      ....|||+| +.||+|.+...-....|+.|+++.|+-+..+.+..++|.. .-+|..++   ..+..++++...|+.|+.
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L   85 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLL   85 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEE
Confidence            345688887 4789999998888899999999999988887776677762 22333332   146677777777899999


Q ss_pred             EeCCCc
Q 026217          126 FENVGG  131 (241)
Q Consensus       126 ~d~~g~  131 (241)
                      +|.+|.
T Consensus        86 ~NNAG~   91 (289)
T KOG1209|consen   86 YNNAGQ   91 (289)
T ss_pred             EcCCCC
Confidence            998774

>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional

Probab=97.87  E-value=0.00018  Score=59.53  Aligned_cols=112  Identities=17%  Similarity=0.118  Sum_probs=77.1

Q ss_pred             hcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhH
Q 026217           31 ILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDL  110 (241)
Q Consensus        31 ~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~  110 (241)
                      ++..+....+..+.+..+++++++||-+|  .|.|..+..+++..|++|++++.+++..+.+++.. ....+..... ++
T Consensus       147 ~L~~Aq~~k~~~l~~~l~l~~g~rVLDIG--cG~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~-~~l~v~~~~~-D~  222 (383)
T PRK11705        147 TLEEAQEAKLDLICRKLQLKPGMRVLDIG--CGWGGLARYAAEHYGVSVVGVTISAEQQKLAQERC-AGLPVEIRLQ-DY  222 (383)
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCCEEEEeC--CCccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-ccCeEEEEEC-ch
Confidence            33344445556666677889999999999  46888889999988999999999999999998433 2111111111 22


Q ss_pred             HHHHHHHCCCCccEEEeC-----CCc----hhHHHHHHhhccCCEEEEEe
Q 026217          111 DAALKRYFPEGINIYFEN-----VGG----KMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       111 ~~~i~~~~~~~~d~v~d~-----~g~----~~~~~~~~~l~~~G~~v~~g  151 (241)
                      .    +. .+.+|.|+..     +|.    ..+..+.+.|+|+|.++...
T Consensus       223 ~----~l-~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~  267 (383)
T PRK11705        223 R----DL-NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT  267 (383)
T ss_pred             h----hc-CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence            1    11 3479988643     332    35678888999999998754

>PRK06180 short chain dehydrogenase; Provisional

Probab=97.86  E-value=0.00014  Score=57.53  Aligned_cols=81  Identities=17%  Similarity=0.169  Sum_probs=55.9

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC---eeecCCCchhHHHHHHHHCC--CCccEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEPDLDAALKRYFP--EGINIY  125 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~---~~i~~~~~~~~~~~i~~~~~--~~~d~v  125 (241)
                      .+.+++|+||+|++|...++.+...|++|+++++++++.+.+.+..+..   ...|..+...+...+.....  +++|++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v   82 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL   82 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            3568999999999999999998889999999999988877666233221   12344443133333332211  369999


Q ss_pred             EeCCCc
Q 026217          126 FENVGG  131 (241)
Q Consensus       126 ~d~~g~  131 (241)
                      ++++|.
T Consensus        83 v~~ag~   88 (277)
T PRK06180         83 VNNAGY   88 (277)
T ss_pred             EECCCc
Confidence            999874

>PRK07814 short chain dehydrogenase; Provisional

Probab=97.86  E-value=0.00012  Score=57.41  Aligned_cols=80  Identities=16%  Similarity=0.215  Sum_probs=54.7

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC-e--eecCCCchhHHHHHHHHCC--CCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYFP--EGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~--~i~~~~~~~~~~~i~~~~~--~~~  122 (241)
                      ++.+++|+||+|++|...++.+...|++|+++++++++.+.+.+.+   +.. +  ..|..+...+...+.+...  +++
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   88 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRL   88 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999999999999999887765544232   221 1  2344443123222222211  369


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |++++++|
T Consensus        89 d~vi~~Ag   96 (263)
T PRK07814         89 DIVVNNVG   96 (263)
T ss_pred             CEEEECCC
Confidence            99999887

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.85  E-value=0.00013  Score=56.68  Aligned_cols=81  Identities=20%  Similarity=0.277  Sum_probs=55.2

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC--CC---eeecCCCchhHHHHHHHHC--CCCcc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFG--FD---EAFNYKEEPDLDAALKRYF--PEGIN  123 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g--~~---~~i~~~~~~~~~~~i~~~~--~~~~d  123 (241)
                      .+.+++|+||+|++|..+++.+...|++|+++++++++.+.+.+.+.  ..   ...|..+..++...+....  .+++|
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   83 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVD   83 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            45689999999999999999988899999999999887666543433  11   1234444323333333221  13699


Q ss_pred             EEEeCCCc
Q 026217          124 IYFENVGG  131 (241)
Q Consensus       124 ~v~d~~g~  131 (241)
                      +++.++|.
T Consensus        84 ~vi~~ag~   91 (251)
T PRK07231         84 ILVNNAGT   91 (251)
T ss_pred             EEEECCCC
Confidence            99998873

>PRK07831 short chain dehydrogenase; Provisional

Probab=97.84  E-value=0.00017  Score=56.58  Aligned_cols=82  Identities=22%  Similarity=0.319  Sum_probs=55.4

Q ss_pred             CCCCcEEEEEcCCc-hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----cCCCee----ecCCCchhHHHHHHHHC-
Q 026217           49 PKQGEYVFVSAASG-AVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK----FGFDEA----FNYKEEPDLDAALKRYF-  118 (241)
Q Consensus        49 ~~~~~~vlI~ga~g-~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~----~g~~~~----i~~~~~~~~~~~i~~~~-  118 (241)
                      +.++.+++|+||+| ++|.++++.+...|++|+++++++++.+...++    ++...+    .|..+..++...+.... 
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   93 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE   93 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            44578999999986 899999999999999999999887766544322    343222    34444312333232221 


Q ss_pred             -CCCccEEEeCCC
Q 026217          119 -PEGINIYFENVG  130 (241)
Q Consensus       119 -~~~~d~v~d~~g  130 (241)
                       -+++|+++++.|
T Consensus        94 ~~g~id~li~~ag  106 (262)
T PRK07831         94 RLGRLDVLVNNAG  106 (262)
T ss_pred             HcCCCCEEEECCC
Confidence             137999999998

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional

Probab=97.84  E-value=4.2e-05  Score=66.82  Aligned_cols=78  Identities=18%  Similarity=0.310  Sum_probs=57.9

Q ss_pred             CCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC---------------------HHHHHHHHHHcCCCeeecCCC
Q 026217           48 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS---------------------KDKVDLLKNKFGFDEAFNYKE  106 (241)
Q Consensus        48 ~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~---------------------~~~~~~~~~~~g~~~~i~~~~  106 (241)
                      ...+|++|+|+|+ |+.|+++++.++..|++|+++.+.                     +.+.+.++ ++|++..++...
T Consensus       133 ~~~~g~~V~VIGa-GpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~-~~Gv~~~~~~~~  210 (564)
T PRK12771        133 APDTGKRVAVIGG-GPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRIL-DLGVEVRLGVRV  210 (564)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHH-HCCCEEEeCCEE
Confidence            3678999999996 999999999999999999998742                     34567777 889876655433


Q ss_pred             -chhH-HHHHHHHCCCCccEEEeCCCch
Q 026217          107 -EPDL-DAALKRYFPEGINIYFENVGGK  132 (241)
Q Consensus       107 -~~~~-~~~i~~~~~~~~d~v~d~~g~~  132 (241)
                       . ++ .+.+.    .++|+||+++|..
T Consensus       211 ~~-~~~~~~~~----~~~D~Vi~AtG~~  233 (564)
T PRK12771        211 GE-DITLEQLE----GEFDAVFVAIGAQ  233 (564)
T ss_pred             CC-cCCHHHHH----hhCCEEEEeeCCC
Confidence             1 21 11221    2599999999963

>PRK06949 short chain dehydrogenase; Provisional

Probab=97.84  E-value=0.00013  Score=56.97  Aligned_cols=81  Identities=21%  Similarity=0.310  Sum_probs=55.5

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CC-Ce--eecCCCchhHHHHHHHHC--CCC
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GF-DE--AFNYKEEPDLDAALKRYF--PEG  121 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~-~~--~i~~~~~~~~~~~i~~~~--~~~  121 (241)
                      ..+.+++|+||+|++|..+++.+...|++|+++++++++.+.+.+.+   +. ..  ..|..+..++...+.+..  .++
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   86 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT   86 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            35789999999999999999999999999999999988766554232   11 11  223333313333333221  137


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|+++++.|
T Consensus        87 ~d~li~~ag   95 (258)
T PRK06949         87 IDILVNNSG   95 (258)
T ss_pred             CCEEEECCC
Confidence            999999998

>PRK05854 short chain dehydrogenase; Provisional

Probab=97.84  E-value=0.0002  Score=57.84  Aligned_cols=80  Identities=16%  Similarity=0.179  Sum_probs=53.6

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----C-CC-e--eecCCCchhHHHHHHHHC--CC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF----G-FD-E--AFNYKEEPDLDAALKRYF--PE  120 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~----g-~~-~--~i~~~~~~~~~~~i~~~~--~~  120 (241)
                      .+.+++|+||++++|.++++.+...|++|++++++.++.+.+.+++    + .. .  ..|..+..++...+.+..  .+
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~   92 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGR   92 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            4679999999999999999988889999999999887655443232    1 11 1  234444312222222221  13


Q ss_pred             CccEEEeCCC
Q 026217          121 GINIYFENVG  130 (241)
Q Consensus       121 ~~d~v~d~~g  130 (241)
                      ++|++++++|
T Consensus        93 ~iD~li~nAG  102 (313)
T PRK05854         93 PIHLLINNAG  102 (313)
T ss_pred             CccEEEECCc
Confidence            7999999887

>PRK07478 short chain dehydrogenase; Provisional

Probab=97.83  E-value=0.00013  Score=56.91  Aligned_cols=80  Identities=24%  Similarity=0.348  Sum_probs=54.6

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC-e--eecCCCchhHHHHHHHHCC--CCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYFP--EGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~--~i~~~~~~~~~~~i~~~~~--~~~  122 (241)
                      .+.+++|+||++++|...++.+...|++|+.+++++++.+.+.+++   +.. .  ..|..+..+....+.+...  +++
T Consensus         5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (254)
T PRK07478          5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL   84 (254)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            3678999999999999999999899999999999888766554333   322 1  2244443123222332211  379


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |++++++|
T Consensus        85 d~li~~ag   92 (254)
T PRK07478         85 DIAFNNAG   92 (254)
T ss_pred             CEEEECCC
Confidence            99999887

>PRK07832 short chain dehydrogenase; Provisional

Probab=97.83  E-value=0.00044  Score=54.58  Aligned_cols=78  Identities=13%  Similarity=0.148  Sum_probs=52.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCC----eeecCCCchhHHHHHHHHC--CCCccE
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFD----EAFNYKEEPDLDAALKRYF--PEGINI  124 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~---~g~~----~~i~~~~~~~~~~~i~~~~--~~~~d~  124 (241)
                      +++|+||+|++|..+++.+...|++|+++++++++.+.+.++   .+..    ...|..+..++...+.+..  .+++|+
T Consensus         2 ~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (272)
T PRK07832          2 RCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMDV   81 (272)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            689999999999999999989999999999887765444322   2322    1245555422222222221  136999


Q ss_pred             EEeCCCc
Q 026217          125 YFENVGG  131 (241)
Q Consensus       125 v~d~~g~  131 (241)
                      +++++|.
T Consensus        82 lv~~ag~   88 (272)
T PRK07832         82 VMNIAGI   88 (272)
T ss_pred             EEECCCC
Confidence            9999973

>PRK06841 short chain dehydrogenase; Provisional

Probab=97.82  E-value=0.00017  Score=56.24  Aligned_cols=79  Identities=15%  Similarity=0.251  Sum_probs=53.3

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC----eeecCCCchhHHHHHHHHCC--CCccE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD----EAFNYKEEPDLDAALKRYFP--EGINI  124 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~----~~i~~~~~~~~~~~i~~~~~--~~~d~  124 (241)
                      .+.+++|+||+|++|...++.+...|++|+.++++++..+... +....    ...|..+..++...+.+...  +++|.
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   92 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAA-QLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI   92 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            4679999999999999999998889999999998876555454 33221    12344433123322222211  36999


Q ss_pred             EEeCCC
Q 026217          125 YFENVG  130 (241)
Q Consensus       125 v~d~~g  130 (241)
                      ++.++|
T Consensus        93 vi~~ag   98 (255)
T PRK06841         93 LVNSAG   98 (255)
T ss_pred             EEECCC
Confidence            999987

>PRK07890 short chain dehydrogenase; Provisional

Probab=97.82  E-value=0.00013  Score=56.97  Aligned_cols=80  Identities=18%  Similarity=0.214  Sum_probs=55.0

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC---eeecCCCchhHHHHHHHHCC--CCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEPDLDAALKRYFP--EGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~~i~~~~~~~~~~~i~~~~~--~~~  122 (241)
                      ++.+++|+||+|++|...++.+...|++|+++++++++.+.+.+++   +..   ...|..+..++...+.+...  +++
T Consensus         4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   83 (258)
T PRK07890          4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRV   83 (258)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCc
Confidence            5678999999999999999999999999999999887765554333   221   23344443233333332211  369


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |+++.+.|
T Consensus        84 d~vi~~ag   91 (258)
T PRK07890         84 DALVNNAF   91 (258)
T ss_pred             cEEEECCc
Confidence            99999887

>PRK05884 short chain dehydrogenase; Provisional

Probab=97.81  E-value=0.00025  Score=54.33  Aligned_cols=76  Identities=12%  Similarity=0.189  Sum_probs=53.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe-eecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      +++|+||+|++|...++.+...|++|+.+.+++++.+.+.++++... ..|..+..++.+.+.... +.+|+++++.|
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~-~~id~lv~~ag   78 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFP-HHLDTIVNVPA   78 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHh-hcCcEEEECCC
Confidence            48999999999999999998899999999999888776654555432 235444423333333332 25899998865

>PRK07326 short chain dehydrogenase; Provisional

Probab=97.81  E-value=0.00015  Score=55.96  Aligned_cols=80  Identities=16%  Similarity=0.296  Sum_probs=55.0

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC---Ce--eecCCCchhHHHHHHHHCC--CCcc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF---DE--AFNYKEEPDLDAALKRYFP--EGIN  123 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~---~~--~i~~~~~~~~~~~i~~~~~--~~~d  123 (241)
                      ++.+++|+||+|++|..+++.+...|++|+++++++++.+.+.+++..   -+  ..|..+..++...+.....  +++|
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   84 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD   84 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            468899999999999999998888899999999988776655434431   11  1243433233333333221  3699


Q ss_pred             EEEeCCC
Q 026217          124 IYFENVG  130 (241)
Q Consensus       124 ~v~d~~g  130 (241)
                      ++|++.|
T Consensus        85 ~vi~~ag   91 (237)
T PRK07326         85 VLIANAG   91 (237)
T ss_pred             EEEECCC
Confidence            9999886

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=97.80  E-value=0.00019  Score=56.39  Aligned_cols=79  Identities=22%  Similarity=0.360  Sum_probs=60.4

Q ss_pred             CCcEEEEEcCCchHHHH-HHHHHHHcCCEEEEEeCCHHHHHHHHHHc----CC---CeeecCCCchh-HHHHHHHHCCC-
Q 026217           51 QGEYVFVSAASGAVGQL-VGQFAKLVGCYVVGSAGSKDKVDLLKNKF----GF---DEAFNYKEEPD-LDAALKRYFPE-  120 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~-avqla~~~g~~v~~~~~~~~~~~~~~~~~----g~---~~~i~~~~~~~-~~~~i~~~~~~-  120 (241)
                      -|++.+|+||+.++|.+ +-++|+ .|.+|+.+.|++++++.+++++    ++   ..++|..++ + ..+.+++...+ 
T Consensus        48 ~g~WAVVTGaTDGIGKayA~eLAk-rG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~-~~~ye~i~~~l~~~  125 (312)
T KOG1014|consen   48 LGSWAVVTGATDGIGKAYARELAK-RGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKG-DEVYEKLLEKLAGL  125 (312)
T ss_pred             cCCEEEEECCCCcchHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCC-chhHHHHHHHhcCC
Confidence            46899999999999986 555665 9999999999999988776554    32   136777775 4 35566665555 


Q ss_pred             CccEEEeCCCc
Q 026217          121 GINIYFENVGG  131 (241)
Q Consensus       121 ~~d~v~d~~g~  131 (241)
                      .+-+.+|++|-
T Consensus       126 ~VgILVNNvG~  136 (312)
T KOG1014|consen  126 DVGILVNNVGM  136 (312)
T ss_pred             ceEEEEecccc
Confidence            89999999983

>PRK07024 short chain dehydrogenase; Provisional

Probab=97.80  E-value=0.00027  Score=55.28  Aligned_cols=79  Identities=19%  Similarity=0.213  Sum_probs=54.4

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC----C-eeecCCCchhHHHHHHHHCC--CCccE
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF----D-EAFNYKEEPDLDAALKRYFP--EGINI  124 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~----~-~~i~~~~~~~~~~~i~~~~~--~~~d~  124 (241)
                      +.+++|+||+|++|...++.+...|++|+++++++++.+.+.+++..    . ...|..+..++.+.+.+...  +.+|+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   81 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV   81 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            35899999999999999999888899999999988877665534321    1 12344443233333333221  36899


Q ss_pred             EEeCCC
Q 026217          125 YFENVG  130 (241)
Q Consensus       125 v~d~~g  130 (241)
                      +++++|
T Consensus        82 lv~~ag   87 (257)
T PRK07024         82 VIANAG   87 (257)
T ss_pred             EEECCC
Confidence            999887

>PRK09186 flagellin modification protein A; Provisional

Probab=97.79  E-value=0.00019  Score=55.96  Aligned_cols=80  Identities=14%  Similarity=0.198  Sum_probs=54.8

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----CCC---e-eecCCCchhHHHHHHHHCC--C
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF----GFD---E-AFNYKEEPDLDAALKRYFP--E  120 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~----g~~---~-~i~~~~~~~~~~~i~~~~~--~  120 (241)
                      ++.+++|+||+|++|...+..+...|++|+.+++++++.+.+.+++    +..   . ..|..+...+...+.+...  +
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   82 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG   82 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4678999999999999999999999999999998887765554343    221   1 2244443233333333221  3


Q ss_pred             CccEEEeCCC
Q 026217          121 GINIYFENVG  130 (241)
Q Consensus       121 ~~d~v~d~~g  130 (241)
                      ++|+++++.+
T Consensus        83 ~id~vi~~A~   92 (256)
T PRK09186         83 KIDGAVNCAY   92 (256)
T ss_pred             CccEEEECCc
Confidence            6999999885

>PRK05717 oxidoreductase; Validated

Probab=97.79  E-value=0.00024  Score=55.53  Aligned_cols=80  Identities=15%  Similarity=0.233  Sum_probs=54.3

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC---eeecCCCchhHHHHHHHHCC--CCccEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEPDLDAALKRYFP--EGINIY  125 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~---~~i~~~~~~~~~~~i~~~~~--~~~d~v  125 (241)
                      .|.+++|+||+|++|..++..+...|++|+++++++++.+.+.+.++..   ...|..+..++...+.+...  +++|++
T Consensus         9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   88 (255)
T PRK05717          9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDAL   88 (255)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            4678999999999999999999889999999988876655544355432   12344443133222333221  369999


Q ss_pred             EeCCC
Q 026217          126 FENVG  130 (241)
Q Consensus       126 ~d~~g  130 (241)
                      +.++|
T Consensus        89 i~~ag   93 (255)
T PRK05717         89 VCNAA   93 (255)
T ss_pred             EECCC
Confidence            99887

>PRK08267 short chain dehydrogenase; Provisional

Probab=97.79  E-value=0.00026  Score=55.44  Aligned_cols=79  Identities=19%  Similarity=0.315  Sum_probs=56.0

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC-CC---eeecCCCchhHHHHHHHH---CCCCccEE
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFG-FD---EAFNYKEEPDLDAALKRY---FPEGINIY  125 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g-~~---~~i~~~~~~~~~~~i~~~---~~~~~d~v  125 (241)
                      .+++|+||+|++|...++.+...|++|+++++++++.+.+.+..+ ..   ...|..+..++.+.+...   ..+++|++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v   81 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL   81 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence            469999999999999999988899999999999888777653443 11   133555432333333332   13479999


Q ss_pred             EeCCCc
Q 026217          126 FENVGG  131 (241)
Q Consensus       126 ~d~~g~  131 (241)
                      +.++|.
T Consensus        82 i~~ag~   87 (260)
T PRK08267         82 FNNAGI   87 (260)
T ss_pred             EECCCC
Confidence            999973

>PRK06194 hypothetical protein; Provisional

Probab=97.78  E-value=0.00018  Score=57.16  Aligned_cols=81  Identities=15%  Similarity=0.269  Sum_probs=53.6

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC-e--eecCCCchhHHHHHHHHC--CCCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYF--PEGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~--~i~~~~~~~~~~~i~~~~--~~~~  122 (241)
                      ++.++||+||+|++|..+++.+...|++|++++++.+..+...+++   +.. .  ..|..+..++...+....  .+++
T Consensus         5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i   84 (287)
T PRK06194          5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV   84 (287)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            3578999999999999999998889999999998876655443233   322 1  224443313333222221  1368


Q ss_pred             cEEEeCCCc
Q 026217          123 NIYFENVGG  131 (241)
Q Consensus       123 d~v~d~~g~  131 (241)
                      |++++++|.
T Consensus        85 d~vi~~Ag~   93 (287)
T PRK06194         85 HLLFNNAGV   93 (287)
T ss_pred             CEEEECCCC
Confidence            999999973

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=97.78  E-value=0.00025  Score=55.18  Aligned_cols=77  Identities=17%  Similarity=0.347  Sum_probs=54.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe---eecCCCchhHHHHHHHHCC--CCccEEEeC
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGINIYFEN  128 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~---~i~~~~~~~~~~~i~~~~~--~~~d~v~d~  128 (241)
                      +++|+||+|++|.+.++.+...|++|+++++++++.+.+.+.++...   ..|..+..++.+.+.....  +++|.++.+
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~   81 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNN   81 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            68999999999999999999999999999999888776653444321   2244443233333333221  369999998


Q ss_pred             CC
Q 026217          129 VG  130 (241)
Q Consensus       129 ~g  130 (241)
                      +|
T Consensus        82 ag   83 (248)
T PRK10538         82 AG   83 (248)
T ss_pred             CC
Confidence            86

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=97.78  E-value=0.00074  Score=50.56  Aligned_cols=78  Identities=19%  Similarity=0.255  Sum_probs=53.8

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC----CCe-eecCCCchhHHHHHHHHCCCCccEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFG----FDE-AFNYKEEPDLDAALKRYFPEGINIY  125 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g----~~~-~i~~~~~~~~~~~i~~~~~~~~d~v  125 (241)
                      ++.+++|.||+|++|..++..+...|.+|+++.++.++.+.+.+++.    ... ..+..+..++.+.+.     ++|+|
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~diV  101 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIK-----GADVV  101 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHh-----cCCEE
Confidence            56789999999999999888888889999999999887766654442    211 122222112333332     48999


Q ss_pred             EeCCCchh
Q 026217          126 FENVGGKM  133 (241)
Q Consensus       126 ~d~~g~~~  133 (241)
                      +.++....
T Consensus       102 i~at~~g~  109 (194)
T cd01078         102 FAAGAAGV  109 (194)
T ss_pred             EECCCCCc
Confidence            99988544

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=97.77  E-value=0.00026  Score=57.43  Aligned_cols=80  Identities=13%  Similarity=0.199  Sum_probs=55.0

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC---C-e--eecCCCchhHHHHHHHH--CCCCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF---D-E--AFNYKEEPDLDAALKRY--FPEGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~---~-~--~i~~~~~~~~~~~i~~~--~~~~~  122 (241)
                      ++.+++|+||+|++|..+++.+...|++|+++++++++.+.+.+++..   . .  ..|..+..++...+...  ..+++
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   84 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL   84 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence            467899999999999999998888999999999988876655535421   1 1  23444431233223222  12369


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |++++++|
T Consensus        85 D~li~nAg   92 (322)
T PRK07453         85 DALVCNAA   92 (322)
T ss_pred             cEEEECCc
Confidence            99999987

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=97.77  E-value=0.00022  Score=55.70  Aligned_cols=80  Identities=20%  Similarity=0.328  Sum_probs=54.2

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC-e--eecCCCchhHHHHHHHHC--CCCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYF--PEGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~--~i~~~~~~~~~~~i~~~~--~~~~  122 (241)
                      .+.+++|+||+|++|...++.+...|++|+++.+++++.+.+.+.+   |.. .  ..|..+..++...+....  -+++
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   88 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI   88 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            4679999999999999999988889999999999877655443232   221 1  224444323333333221  1369


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |+++++.|
T Consensus        89 d~li~~ag   96 (255)
T PRK07523         89 DILVNNAG   96 (255)
T ss_pred             CEEEECCC
Confidence            99999987

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=97.77  E-value=0.00022  Score=55.92  Aligned_cols=77  Identities=23%  Similarity=0.273  Sum_probs=52.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCCe--eecCCCchhHHHHHHHHCC--CCccEEE
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE--AFNYKEEPDLDAALKRYFP--EGINIYF  126 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~~--~i~~~~~~~~~~~i~~~~~--~~~d~v~  126 (241)
                      +++|+||++++|.+.++.+...|++|+.+++++++.+.+.+++   +..+  ..|..+..++...+.+...  +++|+++
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li   81 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV   81 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            5899999999999999999889999999999887765554333   2111  2344443233333333221  3799999


Q ss_pred             eCCC
Q 026217          127 ENVG  130 (241)
Q Consensus       127 d~~g  130 (241)
                      ++.|
T Consensus        82 ~naG   85 (259)
T PRK08340         82 WNAG   85 (259)
T ss_pred             ECCC
Confidence            9887

>PRK05876 short chain dehydrogenase; Provisional

Probab=97.76  E-value=0.00021  Score=56.65  Aligned_cols=80  Identities=19%  Similarity=0.292  Sum_probs=54.1

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCCe---eecCCCchhHHHHHHHHC--CCCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEPDLDAALKRYF--PEGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---~i~~~~~~~~~~~i~~~~--~~~~  122 (241)
                      .+.+++|+||+|++|.+.++.+...|++|+++++++++.+.+.+++   +...   ..|..+..++...+.+..  -+++
T Consensus         5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   84 (275)
T PRK05876          5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHV   84 (275)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999999999999999999999999999998877665544233   3221   234444313332222221  1369


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |+++++.|
T Consensus        85 d~li~nAg   92 (275)
T PRK05876         85 DVVFSNAG   92 (275)
T ss_pred             CEEEECCC
Confidence            99999887

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.75  E-value=0.00031  Score=54.60  Aligned_cols=80  Identities=15%  Similarity=0.282  Sum_probs=53.9

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCC---eeecCCCchhHHHHHHHHCC--CCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFD---EAFNYKEEPDLDAALKRYFP--EGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~---~g~~---~~i~~~~~~~~~~~i~~~~~--~~~  122 (241)
                      ++.+++|+|++|++|+.+++.+...|++|+++++++++.+.+.++   .+..   ...|..+...+.+.+.....  +++
T Consensus         4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL   83 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            477999999999999999999999999999999887765544322   2332   12343333133332332221  368


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |.+|+++|
T Consensus        84 d~vi~~ag   91 (253)
T PRK08217         84 NGLINNAG   91 (253)
T ss_pred             CEEEECCC
Confidence            99999887

>PRK09291 short chain dehydrogenase; Provisional

Probab=97.75  E-value=0.00026  Score=55.30  Aligned_cols=75  Identities=15%  Similarity=0.256  Sum_probs=52.6

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCC---eeecCCCchhHHHHHHHHCCCCccEE
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFD---EAFNYKEEPDLDAALKRYFPEGINIY  125 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~---~g~~---~~i~~~~~~~~~~~i~~~~~~~~d~v  125 (241)
                      +.+++|+||+|++|..+++.+...|++|+++++++++.+.+++.   .+..   ...|..+.    ..+.....+++|++
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~----~~~~~~~~~~id~v   77 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDA----IDRAQAAEWDVDVL   77 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCH----HHHHHHhcCCCCEE
Confidence            35799999999999999999999999999999987766555422   2221   12344432    22333333479999


Q ss_pred             EeCCC
Q 026217          126 FENVG  130 (241)
Q Consensus       126 ~d~~g  130 (241)
                      |+++|
T Consensus        78 i~~ag   82 (257)
T PRK09291         78 LNNAG   82 (257)
T ss_pred             EECCC
Confidence            99987

>PLN02253 xanthoxin dehydrogenase

Probab=97.74  E-value=0.00028  Score=55.92  Aligned_cols=80  Identities=16%  Similarity=0.187  Sum_probs=54.3

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC-----eeecCCCchhHHHHHHHHCC--CCcc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-----EAFNYKEEPDLDAALKRYFP--EGIN  123 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~-----~~i~~~~~~~~~~~i~~~~~--~~~d  123 (241)
                      .+.+++|+||+|++|.+.++.+...|++|++++++++..+.+.++++..     ...|..+...+.+.+.....  +++|
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id   96 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLD   96 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            4678999999999999999988889999999998876655554344321     12344443233332332211  3699


Q ss_pred             EEEeCCC
Q 026217          124 IYFENVG  130 (241)
Q Consensus       124 ~v~d~~g  130 (241)
                      ++++++|
T Consensus        97 ~li~~Ag  103 (280)
T PLN02253         97 IMVNNAG  103 (280)
T ss_pred             EEEECCC
Confidence            9999887

>PRK07904 short chain dehydrogenase; Provisional

Probab=97.74  E-value=0.0003  Score=54.95  Aligned_cols=83  Identities=13%  Similarity=0.159  Sum_probs=53.1

Q ss_pred             CCCCCcEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHH-HHHHHHHc---CC-C-e--eecCCCchhHHHHHHHHC
Q 026217           48 SPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDK-VDLLKNKF---GF-D-E--AFNYKEEPDLDAALKRYF  118 (241)
Q Consensus        48 ~~~~~~~vlI~ga~g~~G~~avqla~~~-g~~v~~~~~~~~~-~~~~~~~~---g~-~-~--~i~~~~~~~~~~~i~~~~  118 (241)
                      .+..+.+++|+||+|++|+..++-+.+. |++|+++++++++ .+.+.+++   +. . +  ..|..+..++.+.+.+..
T Consensus         4 ~~~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   83 (253)
T PRK07904          4 AVGNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAF   83 (253)
T ss_pred             ccCCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHH
Confidence            3566789999999999999988877666 5899999988764 44332222   32 1 1  234444313333333322


Q ss_pred             C-CCccEEEeCCC
Q 026217          119 P-EGINIYFENVG  130 (241)
Q Consensus       119 ~-~~~d~v~d~~g  130 (241)
                      . +++|+++++.|
T Consensus        84 ~~g~id~li~~ag   96 (253)
T PRK07904         84 AGGDVDVAIVAFG   96 (253)
T ss_pred             hcCCCCEEEEeee
Confidence            2 47999998776

>PRK12828 short chain dehydrogenase; Provisional

Probab=97.74  E-value=0.00023  Score=54.79  Aligned_cols=80  Identities=11%  Similarity=0.140  Sum_probs=51.4

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCCe-eecCCCchhHHHHHHHHCC--CCccE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE-AFNYKEEPDLDAALKRYFP--EGINI  124 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~~-~i~~~~~~~~~~~i~~~~~--~~~d~  124 (241)
                      ++.+++|+||+|++|..+++.+...|++|+++++++++.+...+++   +... ..|..+..++...+.....  +++|+
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   85 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA   85 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence            4679999999999999999999888999999998766533222122   2221 2233332123222222211  36999


Q ss_pred             EEeCCC
Q 026217          125 YFENVG  130 (241)
Q Consensus       125 v~d~~g  130 (241)
                      ++++.|
T Consensus        86 vi~~ag   91 (239)
T PRK12828         86 LVNIAG   91 (239)
T ss_pred             EEECCc
Confidence            999887

>PRK06953 short chain dehydrogenase; Provisional

Probab=97.73  E-value=0.00041  Score=53.02  Aligned_cols=78  Identities=15%  Similarity=0.182  Sum_probs=55.2

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC-eeecCCCchhHHHHHHHHCCCCccEEEeCCCc
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEPDLDAALKRYFPEGINIYFENVGG  131 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~-~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~  131 (241)
                      .+++|+||+|++|...++.+...|++|++++++++..+.++ ..+.. ...|..+..++...+....++++|+++.+.|.
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~   80 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQ-ALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV   80 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHH-hccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence            36899999999999999888888999999999888777776 55543 23344443133332223333479999998763

>PRK08703 short chain dehydrogenase; Provisional

Probab=97.73  E-value=0.00037  Score=53.86  Aligned_cols=80  Identities=16%  Similarity=0.258  Sum_probs=54.4

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CC-C---eeecCCC---c--hhHHHHHHHHC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GF-D---EAFNYKE---E--PDLDAALKRYF  118 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~-~---~~i~~~~---~--~~~~~~i~~~~  118 (241)
                      ++.+++|+||+|++|...++.+...|++|+++++++++.+.+.+++   +. .   ...|..+   .  ..+.+.+....
T Consensus         5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~   84 (239)
T PRK08703          5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEAT   84 (239)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHh
Confidence            4578999999999999999999889999999999987766554332   21 1   1123221   1  02333444444


Q ss_pred             CCCccEEEeCCC
Q 026217          119 PEGINIYFENVG  130 (241)
Q Consensus       119 ~~~~d~v~d~~g  130 (241)
                      .+.+|.+++++|
T Consensus        85 ~~~id~vi~~ag   96 (239)
T PRK08703         85 QGKLDGIVHCAG   96 (239)
T ss_pred             CCCCCEEEEecc
Confidence            347899999888

>PRK06484 short chain dehydrogenase; Validated

Probab=97.73  E-value=0.00024  Score=61.52  Aligned_cols=80  Identities=21%  Similarity=0.326  Sum_probs=58.3

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC---eeecCCCchhHHHHHHHHCC--CCccEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEPDLDAALKRYFP--EGINIY  125 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~---~~i~~~~~~~~~~~i~~~~~--~~~d~v  125 (241)
                      ++.+++|+||++++|.+.++.+...|++|+.++++.++.+.+.++++..   ...|..+..++...+.....  +++|++
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l   83 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVL   83 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence            5789999999999999999999999999999999988877666466543   23444443233333333221  379999


Q ss_pred             EeCCC
Q 026217          126 FENVG  130 (241)
Q Consensus       126 ~d~~g  130 (241)
                      +++.|
T Consensus        84 i~nag   88 (520)
T PRK06484         84 VNNAG   88 (520)
T ss_pred             EECCC
Confidence            99886

>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional

Probab=97.73  E-value=0.00084  Score=50.43  Aligned_cols=99  Identities=20%  Similarity=0.321  Sum_probs=68.2

Q ss_pred             hcCCCCCcEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---HcCC-CeeecCCCchhHHHHHHHHCC
Q 026217           46 VCSPKQGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKN---KFGF-DEAFNYKEEPDLDAALKRYFP  119 (241)
Q Consensus        46 ~~~~~~~~~vlI~ga~g~~G~~avqla~~~g--~~v~~~~~~~~~~~~~~~---~~g~-~~~i~~~~~~~~~~~i~~~~~  119 (241)
                      ...+.++++|+..|+ |+ |..++++++..+  .+|++++.+++..+.+++   .+|. +.+.....  +..+.+.. ..
T Consensus        35 ~l~~~~~~~vlDlG~-Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~--d~~~~l~~-~~  109 (198)
T PRK00377         35 KLRLRKGDMILDIGC-GT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKG--EAPEILFT-IN  109 (198)
T ss_pred             HcCCCCcCEEEEeCC-cC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEe--chhhhHhh-cC
Confidence            457889999999994 55 999999998764  589999999988877653   3552 22211111  22222222 22


Q ss_pred             CCccEEEeCCCc----hhHHHHHHhhccCCEEEE
Q 026217          120 EGINIYFENVGG----KMLDAVLLNMRIQGRITL  149 (241)
Q Consensus       120 ~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~  149 (241)
                      +.+|.|+...+.    ..+..+.+.|+++|+++.
T Consensus       110 ~~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~  143 (198)
T PRK00377        110 EKFDRIFIGGGSEKLKEIISASWEIIKKGGRIVI  143 (198)
T ss_pred             CCCCEEEECCCcccHHHHHHHHHHHcCCCcEEEE
Confidence            479999986552    467788889999999985

>PRK06197 short chain dehydrogenase; Provisional

Probab=97.73  E-value=0.00036  Score=56.15  Aligned_cols=80  Identities=20%  Similarity=0.240  Sum_probs=53.3

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc-----CCC-e--eecCCCchhHHHHHHHHCC--C
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF-----GFD-E--AFNYKEEPDLDAALKRYFP--E  120 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~-----g~~-~--~i~~~~~~~~~~~i~~~~~--~  120 (241)
                      .+.+++|+||+|++|..+++.+...|++|++++++.++.+.+.+++     +.. .  ..|..+..++...+.+...  +
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~   94 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYP   94 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCC
Confidence            5679999999999999999988888999999998877654432222     111 1  2344443233333333221  3


Q ss_pred             CccEEEeCCC
Q 026217          121 GINIYFENVG  130 (241)
Q Consensus       121 ~~d~v~d~~g  130 (241)
                      ++|++++++|
T Consensus        95 ~iD~li~nAg  104 (306)
T PRK06197         95 RIDLLINNAG  104 (306)
T ss_pred             CCCEEEECCc
Confidence            6999999987

>CHL00194 ycf39 Ycf39; Provisional

Probab=97.72  E-value=0.0005  Score=55.64  Aligned_cols=94  Identities=17%  Similarity=0.216  Sum_probs=62.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCee-ecCCCchhHHHHHHHHCCCCccEEEeCCCch
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEA-FNYKEEPDLDAALKRYFPEGINIYFENVGGK  132 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~-i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~  132 (241)
                      +|+|+||+|-+|...++.+...|.+|++++|+.++...+. ..+...+ .|..+..++...+.     ++|+||++++..
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~-~~~v~~v~~Dl~d~~~l~~al~-----g~d~Vi~~~~~~   75 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLK-EWGAELVYGDLSLPETLPPSFK-----GVTAIIDASTSR   75 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHh-hcCCEEEECCCCCHHHHHHHHC-----CCCEEEECCCCC
Confidence            6999999999999999999999999999999877666555 4555322 23333312332232     599999987631


Q ss_pred             -------------hHHHHHHhhccCC--EEEEEeee
Q 026217          133 -------------MLDAVLLNMRIQG--RITLCGMI  153 (241)
Q Consensus       133 -------------~~~~~~~~l~~~G--~~v~~g~~  153 (241)
                                   .....++.++..|  +++.++..
T Consensus        76 ~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~  111 (317)
T CHL00194         76 PSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL  111 (317)
T ss_pred             CCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence                         0123445454443  78877763

>PRK06482 short chain dehydrogenase; Provisional

Probab=97.72  E-value=0.00034  Score=55.32  Aligned_cols=78  Identities=22%  Similarity=0.314  Sum_probs=54.4

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC---eeecCCCchhHHHHHHHHC--CCCccEEEe
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEPDLDAALKRYF--PEGINIYFE  127 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~---~~i~~~~~~~~~~~i~~~~--~~~~d~v~d  127 (241)
                      .++||+||+|++|...++.+...|.+|+++++++++.+.+++..+..   ...|..+...+.+.+.+..  .+++|++|+
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   82 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS   82 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            47999999999999999988889999999999988877776343321   1234444313333333221  136899999


Q ss_pred             CCC
Q 026217          128 NVG  130 (241)
Q Consensus       128 ~~g  130 (241)
                      ++|
T Consensus        83 ~ag   85 (276)
T PRK06482         83 NAG   85 (276)
T ss_pred             CCC
Confidence            987

>PRK07677 short chain dehydrogenase; Provisional

Probab=97.72  E-value=0.00024  Score=55.42  Aligned_cols=79  Identities=15%  Similarity=0.207  Sum_probs=53.3

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC-ee--ecCCCchhHHHHHHHHCC--CCcc
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-EA--FNYKEEPDLDAALKRYFP--EGIN  123 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~~--i~~~~~~~~~~~i~~~~~--~~~d  123 (241)
                      +.+++|+||+|++|...++.+...|++|+++++++++.+.+.+++   +.. ..  .|..++.++...+.+...  +++|
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID   80 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            468999999999999999999999999999998887665554232   211 12  244443133333332211  3699


Q ss_pred             EEEeCCC
Q 026217          124 IYFENVG  130 (241)
Q Consensus       124 ~v~d~~g  130 (241)
                      ++++++|
T Consensus        81 ~lI~~ag   87 (252)
T PRK07677         81 ALINNAA   87 (252)
T ss_pred             EEEECCC
Confidence            9999887

>PRK09072 short chain dehydrogenase; Provisional

Probab=97.71  E-value=0.00038  Score=54.65  Aligned_cols=81  Identities=22%  Similarity=0.329  Sum_probs=54.4

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc--CCC-e--eecCCCchhHHHHHHHHC-CCCccE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF--GFD-E--AFNYKEEPDLDAALKRYF-PEGINI  124 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~--g~~-~--~i~~~~~~~~~~~i~~~~-~~~~d~  124 (241)
                      ++.+++|+||+|++|...++.+...|++|+++++++++.+.+.+++  +.. .  ..|..+..++...+.... .+++|.
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~   83 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV   83 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence            4678999999999999999998889999999999988776665343  111 1  123433312222222111 247999


Q ss_pred             EEeCCCc
Q 026217          125 YFENVGG  131 (241)
Q Consensus       125 v~d~~g~  131 (241)
                      +++++|.
T Consensus        84 lv~~ag~   90 (263)
T PRK09072         84 LINNAGV   90 (263)
T ss_pred             EEECCCC
Confidence            9999873

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=97.70  E-value=0.00036  Score=54.17  Aligned_cols=79  Identities=19%  Similarity=0.275  Sum_probs=52.3

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH--HHHHHHHHcCCC---eeecCCCchhHHHHHHHHCC--CCcc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD--KVDLLKNKFGFD---EAFNYKEEPDLDAALKRYFP--EGIN  123 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~--~~~~~~~~~g~~---~~i~~~~~~~~~~~i~~~~~--~~~d  123 (241)
                      .+.+++|+||+|++|...++.+...|++|+.+++++.  ..+.++ +.+..   ...|..+..++...+.+...  +++|
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   82 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVE-ALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID   82 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHH-hcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4688999999999999999999999999999997652  123333 44422   12344443233333332211  3699


Q ss_pred             EEEeCCC
Q 026217          124 IYFENVG  130 (241)
Q Consensus       124 ~v~d~~g  130 (241)
                      ++++++|
T Consensus        83 ~li~~ag   89 (248)
T TIGR01832        83 ILVNNAG   89 (248)
T ss_pred             EEEECCC
Confidence            9999887

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK08589 short chain dehydrogenase; Validated

Probab=97.70  E-value=0.00027  Score=55.88  Aligned_cols=79  Identities=18%  Similarity=0.264  Sum_probs=52.1

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC---eeecCCCchhHHHHHHHHCC--CCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEPDLDAALKRYFP--EGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~~i~~~~~~~~~~~i~~~~~--~~~  122 (241)
                      ++.+++|+||++++|.+.++.+...|++|++++++ ++.+.+.+++   +..   ...|..+..++...+.+...  +++
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   83 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRV   83 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            46799999999999999999888899999999988 4433322133   221   12344443233333333221  369


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |++++++|
T Consensus        84 d~li~~Ag   91 (272)
T PRK08589         84 DVLFNNAG   91 (272)
T ss_pred             CEEEECCC
Confidence            99999887

>PRK09242 tropinone reductase; Provisional

Probab=97.70  E-value=0.00031  Score=54.94  Aligned_cols=81  Identities=21%  Similarity=0.291  Sum_probs=54.9

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc-----CCC---eeecCCCchhHHHHHHHHC--CC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF-----GFD---EAFNYKEEPDLDAALKRYF--PE  120 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~-----g~~---~~i~~~~~~~~~~~i~~~~--~~  120 (241)
                      .+.+++|+||+|++|..+++.+...|++|+++++++++.+.+.+++     +..   ...|..+..++...+.+..  -+
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   87 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD   87 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4779999999999999999999999999999999887765554332     211   1224444312332232221  13


Q ss_pred             CccEEEeCCCc
Q 026217          121 GINIYFENVGG  131 (241)
Q Consensus       121 ~~d~v~d~~g~  131 (241)
                      ++|+++.+.|.
T Consensus        88 ~id~li~~ag~   98 (257)
T PRK09242         88 GLHILVNNAGG   98 (257)
T ss_pred             CCCEEEECCCC
Confidence            79999999973

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=97.70  E-value=0.0004  Score=54.31  Aligned_cols=80  Identities=20%  Similarity=0.282  Sum_probs=55.3

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC-e--eecCCCchhHHHHHHHHC--CCCccEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-E--AFNYKEEPDLDAALKRYF--PEGINIY  125 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~-~--~i~~~~~~~~~~~i~~~~--~~~~d~v  125 (241)
                      .+.+++|+||+|++|...++.+...|++|++++++.++.+.+.++++.. .  ..|..+..++...+.+..  -+++|++
T Consensus         5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   84 (257)
T PRK07067          5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL   84 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            3578999999999999999999999999999999988777666444421 1  223333313333333221  1369999


Q ss_pred             EeCCC
Q 026217          126 FENVG  130 (241)
Q Consensus       126 ~d~~g  130 (241)
                      +.+.|
T Consensus        85 i~~ag   89 (257)
T PRK07067         85 FNNAA   89 (257)
T ss_pred             EECCC
Confidence            99886

>PRK06128 oxidoreductase; Provisional

Probab=97.69  E-value=0.00076  Score=54.11  Aligned_cols=79  Identities=16%  Similarity=0.227  Sum_probs=50.0

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH--HH----HHHHHHcCCCe---eecCCCchhHHHHHHHHCC--
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD--KV----DLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--  119 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~--~~----~~~~~~~g~~~---~i~~~~~~~~~~~i~~~~~--  119 (241)
                      .+.++||+||+|++|..+++.+...|++|+++.++.+  ..    +.++ ..|...   ..|..+...+.+.+.+...  
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  132 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQ-AEGRKAVALPGDLKDEAFCRQLVERAVKEL  132 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHH-HcCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence            4679999999999999999999889999988875432  22    2222 334321   1244443123333332211  


Q ss_pred             CCccEEEeCCC
Q 026217          120 EGINIYFENVG  130 (241)
Q Consensus       120 ~~~d~v~d~~g  130 (241)
                      +++|++++++|
T Consensus       133 g~iD~lV~nAg  143 (300)
T PRK06128        133 GGLDILVNIAG  143 (300)
T ss_pred             CCCCEEEECCc
Confidence            36999999887

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=97.69  E-value=0.00028  Score=55.58  Aligned_cols=82  Identities=20%  Similarity=0.348  Sum_probs=57.0

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC---CC------eeecCCCchhHH---HHHHHH
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFG---FD------EAFNYKEEPDLD---AALKRY  117 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g---~~------~~i~~~~~~~~~---~~i~~~  117 (241)
                      -.|..++|+|++.++|.+++..+...|++|+++.+++++.+...+++.   ..      ...|..+..+..   +...+.
T Consensus         6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~   85 (270)
T KOG0725|consen    6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK   85 (270)
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999999887766553322   11      223443321222   222222


Q ss_pred             CCCCccEEEeCCCc
Q 026217          118 FPEGINIYFENVGG  131 (241)
Q Consensus       118 ~~~~~d~v~d~~g~  131 (241)
                      ..|++|+++++.|.
T Consensus        86 ~~GkidiLvnnag~   99 (270)
T KOG0725|consen   86 FFGKIDILVNNAGA   99 (270)
T ss_pred             hCCCCCEEEEcCCc
Confidence            23579999998873

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=97.68  E-value=0.00071  Score=53.20  Aligned_cols=101  Identities=20%  Similarity=0.206  Sum_probs=75.4

Q ss_pred             CCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeC
Q 026217           49 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFEN  128 (241)
Q Consensus        49 ~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~  128 (241)
                      +.+++ |.|+|+ |.+|.-+..+|.-+|++|++.+.+.++++.+.+.|+...-.-++....+.+.++     +.|+++.+
T Consensus       166 V~~~k-v~iiGG-GvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~-----~aDlvIga  238 (371)
T COG0686         166 VLPAK-VVVLGG-GVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVK-----KADLVIGA  238 (371)
T ss_pred             CCCcc-EEEECC-ccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhh-----hccEEEEE
Confidence            44555 667786 999999999999999999999999999999996676542222333325555554     38999887


Q ss_pred             C---Cch----hHHHHHHhhccCCEEEEEeeeccc
Q 026217          129 V---GGK----MLDAVLLNMRIQGRITLCGMISQY  156 (241)
Q Consensus       129 ~---g~~----~~~~~~~~l~~~G~~v~~g~~~~~  156 (241)
                      +   |..    ..+.....|++++.++.+..+.+.
T Consensus       239 VLIpgakaPkLvt~e~vk~MkpGsVivDVAiDqGG  273 (371)
T COG0686         239 VLIPGAKAPKLVTREMVKQMKPGSVIVDVAIDQGG  273 (371)
T ss_pred             EEecCCCCceehhHHHHHhcCCCcEEEEEEEcCCC
Confidence            6   222    467788999999999998776654

>PRK06914 short chain dehydrogenase; Provisional

Probab=97.68  E-value=0.00033  Score=55.52  Aligned_cols=78  Identities=15%  Similarity=0.287  Sum_probs=53.7

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCC---e--eecCCCchhHHHHHHHHCC--CC
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFD---E--AFNYKEEPDLDAALKRYFP--EG  121 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~---~g~~---~--~i~~~~~~~~~~~i~~~~~--~~  121 (241)
                      +.+++|+||+|++|...++.+...|++|+++++++++.+.+.+.   .+.+   +  ..|..+..++.. +.+...  ++
T Consensus         3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~~   81 (280)
T PRK06914          3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIGR   81 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcCC
Confidence            56899999999999999998888999999999888766554322   2211   1  235554423433 443321  36


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|+++.++|
T Consensus        82 id~vv~~ag   90 (280)
T PRK06914         82 IDLLVNNAG   90 (280)
T ss_pred             eeEEEECCc
Confidence            899999987

>PRK07774 short chain dehydrogenase; Provisional

Probab=97.68  E-value=0.00032  Score=54.55  Aligned_cols=80  Identities=16%  Similarity=0.187  Sum_probs=52.9

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CC--C-eeecCCCchhHHHHHHHHC--CCCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GF--D-EAFNYKEEPDLDAALKRYF--PEGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~--~-~~i~~~~~~~~~~~i~~~~--~~~~  122 (241)
                      .+.+++|+||+|++|..+++.+...|++|+++.++++..+.+.+++   +.  . ...|..+...+...+....  .+++
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   84 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI   84 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            4678999999999999999988889999999998876654443232   21  1 1234444312222222221  1369


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |++|.++|
T Consensus        85 d~vi~~ag   92 (250)
T PRK07774         85 DYLVNNAA   92 (250)
T ss_pred             CEEEECCC
Confidence            99999888

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.68  E-value=0.00039  Score=55.08  Aligned_cols=104  Identities=9%  Similarity=0.090  Sum_probs=67.4

Q ss_pred             CCcEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHHcCCCe--eecCCCchhHHHHHHHHCC--CC
Q 026217           51 QGEYVFVSAAS--GAVGQLVGQFAKLVGCYVVGSAGSKD---KVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFP--EG  121 (241)
Q Consensus        51 ~~~~vlI~ga~--g~~G~~avqla~~~g~~v~~~~~~~~---~~~~~~~~~g~~~--~i~~~~~~~~~~~i~~~~~--~~  121 (241)
                      .+.+++|+||+  +++|+++++.+...|++|+.+.++++   +.+.+.++++...  ..|..+..++...+.....  ++
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~   83 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGK   83 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            46799999996  79999999999999999999988743   3343432455322  2355544233333333322  47


Q ss_pred             ccEEEeCCCch---------------h---------------HHHHHHhhccCCEEEEEeeec
Q 026217          122 INIYFENVGGK---------------M---------------LDAVLLNMRIQGRITLCGMIS  154 (241)
Q Consensus       122 ~d~v~d~~g~~---------------~---------------~~~~~~~l~~~G~~v~~g~~~  154 (241)
                      +|++++++|..               .               .+..+..+..+|+++.++...
T Consensus        84 iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~  146 (274)
T PRK08415         84 IDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLG  146 (274)
T ss_pred             CCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCC
Confidence            99999998820               0               133444566679999887644

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.67  E-value=0.00026  Score=55.40  Aligned_cols=78  Identities=21%  Similarity=0.315  Sum_probs=54.0

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH----HHHHHHHcCC--CeeecCCCchh---HHHHHHHHCCCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK----VDLLKNKFGF--DEAFNYKEEPD---LDAALKRYFPEG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~----~~~~~~~~g~--~~~i~~~~~~~---~~~~i~~~~~~~  121 (241)
                      .|+.|||+||++|+|++.++-..++|++++..+.+++.    .+.++ ..|-  ....|-.+..+   ..+++++..+ .
T Consensus        37 ~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~-~~g~~~~y~cdis~~eei~~~a~~Vk~e~G-~  114 (300)
T KOG1201|consen   37 SGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIR-KIGEAKAYTCDISDREEIYRLAKKVKKEVG-D  114 (300)
T ss_pred             cCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHH-hcCceeEEEecCCCHHHHHHHHHHHHHhcC-C
Confidence            58999999999999999888888889988888877653    34444 3342  13344444313   3445554443 7


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|+++|.+|
T Consensus       115 V~ILVNNAG  123 (300)
T KOG1201|consen  115 VDILVNNAG  123 (300)
T ss_pred             ceEEEeccc
Confidence            999999987

>PRK08862 short chain dehydrogenase; Provisional

Probab=97.67  E-value=0.00033  Score=53.81  Aligned_cols=80  Identities=6%  Similarity=0.137  Sum_probs=54.5

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCCe---eecCCCchhHHHHHHH---HCCCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDE---AFNYKEEPDLDAALKR---YFPEG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~---~g~~~---~i~~~~~~~~~~~i~~---~~~~~  121 (241)
                      ++.+++|+||++++|.+.+..+...|++|+++.+++++.+.+.++   .+...   ..|..+..++...+.+   ..+++
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   83 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA   83 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            467899999999999999998888999999999988876655423   23321   1233333133322322   22226


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|+++++.|
T Consensus        84 iD~li~nag   92 (227)
T PRK08862         84 PDVLVNNWT   92 (227)
T ss_pred             CCEEEECCc
Confidence            999999986

>PRK08251 short chain dehydrogenase; Provisional

Probab=97.67  E-value=0.00038  Score=54.07  Aligned_cols=79  Identities=16%  Similarity=0.285  Sum_probs=53.3

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc-----CCC-e--eecCCCchhHHHHHHHHCC--CC
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF-----GFD-E--AFNYKEEPDLDAALKRYFP--EG  121 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~-----g~~-~--~i~~~~~~~~~~~i~~~~~--~~  121 (241)
                      +.+++|+||+|++|...++.+...|++|+++++++++.+.+.+.+     +.. +  ..|..+..++...+.+...  ++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            467999999999999988888888999999999887766554222     211 1  2344443233333333221  37


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|+++.++|
T Consensus        82 id~vi~~ag   90 (248)
T PRK08251         82 LDRVIVNAG   90 (248)
T ss_pred             CCEEEECCC
Confidence            999999987

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=97.67  E-value=0.00038  Score=54.46  Aligned_cols=80  Identities=21%  Similarity=0.336  Sum_probs=54.4

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC---eeecCCCchhHHHHHHHHCC--CCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEPDLDAALKRYFP--EGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~~i~~~~~~~~~~~i~~~~~--~~~  122 (241)
                      ++.+++|+||+|++|...++.+...|++|+.++++.++.+.+.+.+   +..   ...|..+...+...+.....  +++
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~i   90 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHV   90 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            4678999999999999999999889999999999887766554332   221   12344443133222222211  369


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |.++.++|
T Consensus        91 d~vi~~ag   98 (259)
T PRK08213         91 DILVNNAG   98 (259)
T ss_pred             CEEEECCC
Confidence            99999987

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.67  E-value=0.00042  Score=54.78  Aligned_cols=80  Identities=13%  Similarity=0.173  Sum_probs=52.7

Q ss_pred             CCcEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCHHH---HHHHHHHcCCCe--eecCCCchhHHHHHHHHCC--CC
Q 026217           51 QGEYVFVSAASG--AVGQLVGQFAKLVGCYVVGSAGSKDK---VDLLKNKFGFDE--AFNYKEEPDLDAALKRYFP--EG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g--~~G~~avqla~~~g~~v~~~~~~~~~---~~~~~~~~g~~~--~i~~~~~~~~~~~i~~~~~--~~  121 (241)
                      ++.+++|+||++  ++|.++++.+...|++|+++.++++.   .+.+.++.|...  ..|..+..++...+.+...  +.
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   85 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGK   85 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            568899999986  99999999999999999998876532   233322445322  2344443233333333221  47


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|++++++|
T Consensus        86 iD~lVnnAG   94 (271)
T PRK06505         86 LDFVVHAIG   94 (271)
T ss_pred             CCEEEECCc
Confidence            999999987

>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4)

Probab=97.66  E-value=8.6e-05  Score=58.50  Aligned_cols=103  Identities=18%  Similarity=0.262  Sum_probs=62.9

Q ss_pred             HHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCCeeecCCCchhHHHHHHH
Q 026217           40 YAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKR  116 (241)
Q Consensus        40 ~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~---~g~~~~i~~~~~~~~~~~i~~  116 (241)
                      +..+.+.++++||++||-+|  .|.|-.++.+++..|++|++++.|++..+.+++.   .|...-+..... ++    ++
T Consensus        51 ~~~~~~~~~l~~G~~vLDiG--cGwG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~-D~----~~  123 (273)
T PF02353_consen   51 LDLLCEKLGLKPGDRVLDIG--CGWGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQ-DY----RD  123 (273)
T ss_dssp             HHHHHTTTT--TT-EEEEES---TTSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES--G----GG
T ss_pred             HHHHHHHhCCCCCCEEEEeC--CCccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEe-ec----cc
Confidence            33455668899999999999  5589999999999999999999999998887643   343211111111 11    11


Q ss_pred             HCCCCccEEEe-----CCCc----hhHHHHHHhhccCCEEEEE
Q 026217          117 YFPEGINIYFE-----NVGG----KMLDAVLLNMRIQGRITLC  150 (241)
Q Consensus       117 ~~~~~~d~v~d-----~~g~----~~~~~~~~~l~~~G~~v~~  150 (241)
                      .. +.+|.|+.     .+|.    ..+..+.+.|+|+|+++.-
T Consensus       124 ~~-~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq  165 (273)
T PF02353_consen  124 LP-GKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQ  165 (273)
T ss_dssp             ----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEE
T ss_pred             cC-CCCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEE
Confidence            11 16888754     3442    3477888999999999753

All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....

>PRK08643 acetoin reductase; Validated

Probab=97.66  E-value=0.00033  Score=54.69  Aligned_cols=79  Identities=15%  Similarity=0.179  Sum_probs=53.3

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC---eeecCCCchhHHHHHHHHC--CCCcc
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEPDLDAALKRYF--PEGIN  123 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~~i~~~~~~~~~~~i~~~~--~~~~d  123 (241)
                      +.+++|+||+|++|...++.+...|++|+++++++++.+.+.+++   +..   ...|..+...+...+.+..  -+++|
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN   81 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            468999999999999999999999999999998877665544232   221   1224444313333333221  13699


Q ss_pred             EEEeCCC
Q 026217          124 IYFENVG  130 (241)
Q Consensus       124 ~v~d~~g  130 (241)
                      +++.++|
T Consensus        82 ~vi~~ag   88 (256)
T PRK08643         82 VVVNNAG   88 (256)
T ss_pred             EEEECCC
Confidence            9999986

>PRK08263 short chain dehydrogenase; Provisional

Probab=97.66  E-value=0.0005  Score=54.39  Aligned_cols=79  Identities=23%  Similarity=0.246  Sum_probs=54.3

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC-e--eecCCCchhHHHHHHHHC--CCCccEEE
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-E--AFNYKEEPDLDAALKRYF--PEGINIYF  126 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~-~--~i~~~~~~~~~~~i~~~~--~~~~d~v~  126 (241)
                      +.+++|+||+|++|..+++.+...|++|+++++++++.+.+.+.++.. .  ..|..+..++...+....  -+++|.++
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi   82 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV   82 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            458999999999999999988888999999999988776665343321 1  224433313333333221  13699999


Q ss_pred             eCCC
Q 026217          127 ENVG  130 (241)
Q Consensus       127 d~~g  130 (241)
                      .++|
T Consensus        83 ~~ag   86 (275)
T PRK08263         83 NNAG   86 (275)
T ss_pred             ECCC
Confidence            9987

>PRK07454 short chain dehydrogenase; Provisional

Probab=97.66  E-value=0.00044  Score=53.48  Aligned_cols=80  Identities=14%  Similarity=0.235  Sum_probs=54.2

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC---eeecCCCchhHHHHHHHHCC--CCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEPDLDAALKRYFP--EGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~~i~~~~~~~~~~~i~~~~~--~~~  122 (241)
                      .+.+++|+||+|++|..++..+...|.+|+++++++++.+.+.+.+   +..   ...|..+..++...+.....  +++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP   84 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4568999999999999999999999999999999887665554222   211   12344433133333332211  369


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |++++++|
T Consensus        85 d~lv~~ag   92 (241)
T PRK07454         85 DVLINNAG   92 (241)
T ss_pred             CEEEECCC
Confidence            99999997

>PRK06179 short chain dehydrogenase; Provisional

Probab=97.65  E-value=0.00023  Score=56.06  Aligned_cols=77  Identities=17%  Similarity=0.344  Sum_probs=52.7

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC-eeecCCCchhHHHHHHHHC--CCCccEEEeC
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEPDLDAALKRYF--PEGINIYFEN  128 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~-~~i~~~~~~~~~~~i~~~~--~~~~d~v~d~  128 (241)
                      +.+++|+||+|++|...++.+...|++|+++++++++.+...   +.. ...|..+..++...+....  -+.+|+++++
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~---~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~   80 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPIP---GVELLELDVTDDASVQAAVDEVIARAGRIDVLVNN   80 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccccC---CCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence            468999999999999999988889999999998866544222   222 1234444323443333332  1369999999


Q ss_pred             CCc
Q 026217          129 VGG  131 (241)
Q Consensus       129 ~g~  131 (241)
                      +|.
T Consensus        81 ag~   83 (270)
T PRK06179         81 AGV   83 (270)
T ss_pred             CCC
Confidence            983

>PRK06181 short chain dehydrogenase; Provisional

Probab=97.65  E-value=0.00041  Score=54.38  Aligned_cols=78  Identities=18%  Similarity=0.301  Sum_probs=52.1

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC---eeecCCCchhHHHHHHHHCC--CCccE
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEPDLDAALKRYFP--EGINI  124 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~~i~~~~~~~~~~~i~~~~~--~~~d~  124 (241)
                      .+++|+||+|++|..+++.+...|++|+++++++.+.+.+.+.+   +..   ...|..+...+...+.....  +++|+
T Consensus         2 ~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   81 (263)
T PRK06181          2 KVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGIDI   81 (263)
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            57999999999999999999899999999999877655443222   221   12244443133333332211  36999


Q ss_pred             EEeCCC
Q 026217          125 YFENVG  130 (241)
Q Consensus       125 v~d~~g  130 (241)
                      ++.++|
T Consensus        82 vi~~ag   87 (263)
T PRK06181         82 LVNNAG   87 (263)
T ss_pred             EEECCC
Confidence            999987

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=97.65  E-value=0.0004  Score=54.21  Aligned_cols=80  Identities=18%  Similarity=0.362  Sum_probs=54.0

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC---eeecCCCchhHHHHHHHHC--CCCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEPDLDAALKRYF--PEGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~~i~~~~~~~~~~~i~~~~--~~~~  122 (241)
                      .+.++||+||+|++|...++.+...|++|+.+++++++.+.+.+++   +..   ...|..+..++...+....  -+++
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   87 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI   87 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence            4678999999999999999999999999999998877655443232   221   1234444313333232221  1369


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |+++++.|
T Consensus        88 d~vi~~ag   95 (254)
T PRK08085         88 DVLINNAG   95 (254)
T ss_pred             CEEEECCC
Confidence            99999997

>PRK06138 short chain dehydrogenase; Provisional

Probab=97.64  E-value=0.00035  Score=54.35  Aligned_cols=80  Identities=14%  Similarity=0.198  Sum_probs=53.5

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc--CCC-e--eecCCCchhHHHHHHHHCC--CCcc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF--GFD-E--AFNYKEEPDLDAALKRYFP--EGIN  123 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~--g~~-~--~i~~~~~~~~~~~i~~~~~--~~~d  123 (241)
                      ++.+++|+||+|++|...++.+...|++|+.+++++++.+...+.+  +.. .  ..|..+..++.+.+.....  +++|
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id   83 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLD   83 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4568999999999999999988888999999999877665544233  221 1  2244443133332322211  3799


Q ss_pred             EEEeCCC
Q 026217          124 IYFENVG  130 (241)
Q Consensus       124 ~v~d~~g  130 (241)
                      +++.+.|
T Consensus        84 ~vi~~ag   90 (252)
T PRK06138         84 VLVNNAG   90 (252)
T ss_pred             EEEECCC
Confidence            9999988

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.64  E-value=7.6e-05  Score=63.40  Aligned_cols=94  Identities=16%  Similarity=0.182  Sum_probs=63.5

Q ss_pred             hcCCCCCcEEE----EEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC-eeecCCCchhHHHHHHHHCCC
Q 026217           46 VCSPKQGEYVF----VSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEPDLDAALKRYFPE  120 (241)
Q Consensus        46 ~~~~~~~~~vl----I~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~-~~i~~~~~~~~~~~i~~~~~~  120 (241)
                      ..++++|++++    |+||+|++|.+++|++++.|+.|+++.+.+++....+ ..+.+ .++|.+.. ...+.+....  
T Consensus        28 l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~d~~~~-~~~~~l~~~~--  103 (450)
T PRK08261         28 LRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAGW-GDRFGALVFDATGI-TDPADLKALY--  103 (450)
T ss_pred             ccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccccCc-CCcccEEEEECCCC-CCHHHHHHHH--
Confidence            35678999988    9999999999999999999999999987665443333 33443 35555443 3333333221  


Q ss_pred             CccEEEeCCCchhHHHHHHhhccCCEEEEEeeec
Q 026217          121 GINIYFENVGGKMLDAVLLNMRIQGRITLCGMIS  154 (241)
Q Consensus       121 ~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  154 (241)
                                 ..+...++.+.++|+++.++...
T Consensus       104 -----------~~~~~~l~~l~~~griv~i~s~~  126 (450)
T PRK08261        104 -----------EFFHPVLRSLAPCGRVVVLGRPP  126 (450)
T ss_pred             -----------HHHHHHHHhccCCCEEEEEcccc
Confidence                       24455666777778888777643

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.64  E-value=0.0004  Score=53.66  Aligned_cols=80  Identities=18%  Similarity=0.275  Sum_probs=53.2

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC---eeecCCCchhHHHHHHHHCC--CCcc
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEPDLDAALKRYFP--EGIN  123 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~~i~~~~~~~~~~~i~~~~~--~~~d  123 (241)
                      +.+++|+|++|++|..++..+...|++|+++++++++.+.+.+++   +..   ...|..+..++...++....  +++|
T Consensus         7 ~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   86 (239)
T PRK07666          7 GKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSID   86 (239)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCcc
Confidence            578999999999999999988889999999999877655443222   221   12233333133333333221  3799


Q ss_pred             EEEeCCCc
Q 026217          124 IYFENVGG  131 (241)
Q Consensus       124 ~v~d~~g~  131 (241)
                      .++.++|.
T Consensus        87 ~vi~~ag~   94 (239)
T PRK07666         87 ILINNAGI   94 (239)
T ss_pred             EEEEcCcc
Confidence            99998873

>PRK06483 dihydromonapterin reductase; Provisional

Probab=97.64  E-value=0.00052  Score=52.93  Aligned_cols=78  Identities=14%  Similarity=0.187  Sum_probs=52.2

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHHHcCCCe-eecCCCchhHHHHHHHHCC--CCccEEEe
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK-VDLLKNKFGFDE-AFNYKEEPDLDAALKRYFP--EGINIYFE  127 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~-~~~~~~~~g~~~-~i~~~~~~~~~~~i~~~~~--~~~d~v~d  127 (241)
                      +.+++|+||++++|...++.+...|++|+++++++++ .+.++ ..+... ..|..+..++...+.+...  +++|++++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~   80 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLR-QAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIH   80 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH-HcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEE
Confidence            4579999999999999999988899999999987654 33333 445321 2344333133333333322  36999999


Q ss_pred             CCC
Q 026217          128 NVG  130 (241)
Q Consensus       128 ~~g  130 (241)
                      ++|
T Consensus        81 ~ag   83 (236)
T PRK06483         81 NAS   83 (236)
T ss_pred             CCc
Confidence            887

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=97.63  E-value=0.0005  Score=53.64  Aligned_cols=79  Identities=16%  Similarity=0.267  Sum_probs=52.6

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHHcCCC---eeecCCCchhHHHHHHHHC--CCCcc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK--VDLLKNKFGFD---EAFNYKEEPDLDAALKRYF--PEGIN  123 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~--~~~~~~~~g~~---~~i~~~~~~~~~~~i~~~~--~~~~d  123 (241)
                      ++.+++|+||++++|.+.++.+...|++|+++.+++..  .+.++ ..+..   ...|..+..++...+.+..  -+++|
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD   85 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVE-ALGRKFHFITADLIQQKDIDSIVSQAVEVMGHID   85 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHH-HcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence            47899999999999999999999999999988865432  22333 44432   1235544423333333321  13699


Q ss_pred             EEEeCCC
Q 026217          124 IYFENVG  130 (241)
Q Consensus       124 ~v~d~~g  130 (241)
                      +++++.|
T Consensus        86 ~lv~~ag   92 (251)
T PRK12481         86 ILINNAG   92 (251)
T ss_pred             EEEECCC
Confidence            9999987

>PRK07035 short chain dehydrogenase; Provisional

Probab=97.63  E-value=0.00043  Score=53.94  Aligned_cols=80  Identities=21%  Similarity=0.313  Sum_probs=53.6

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC-e--eecCCCchhHHHHHHHHCC--CCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYFP--EGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~--~i~~~~~~~~~~~i~~~~~--~~~  122 (241)
                      ++.+++|+||+|++|.+.++.+...|++|+.++++.++.+.+.+++   +.. .  ..|..+..++...+.+...  +++
T Consensus         7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   86 (252)
T PRK07035          7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRL   86 (252)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            3568999999999999999999999999999999877665554332   221 1  1244333133322332211  369


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |+++++.|
T Consensus        87 d~li~~ag   94 (252)
T PRK07035         87 DILVNNAA   94 (252)
T ss_pred             CEEEECCC
Confidence            99999887

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.63  E-value=0.00042  Score=54.11  Aligned_cols=79  Identities=13%  Similarity=0.100  Sum_probs=51.9

Q ss_pred             CCcEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC----eeecCCCchhHHHHHHHHCC--CCc
Q 026217           51 QGEYVFVSAAS--GAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD----EAFNYKEEPDLDAALKRYFP--EGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~--g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~----~~i~~~~~~~~~~~i~~~~~--~~~  122 (241)
                      .+.+++|+||+  +++|.+.++.+...|++|++++++++..+.++ ++...    ...|..+..+....+.+...  +.+
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   84 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQ-KLVDEEDLLVECDVASDESIERAFATIKERVGKI   84 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHH-hhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence            57899999998  79999999999899999999988754344444 33221    12344443233333322221  479


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |++++++|
T Consensus        85 D~lv~nAg   92 (252)
T PRK06079         85 DGIVHAIA   92 (252)
T ss_pred             CEEEEccc
Confidence            99999887

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=97.63  E-value=0.00057  Score=52.81  Aligned_cols=81  Identities=21%  Similarity=0.310  Sum_probs=54.2

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCCe-e--ecCCCchhHHHHHHHHCC--CCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDE-A--FNYKEEPDLDAALKRYFP--EGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~---~g~~~-~--i~~~~~~~~~~~i~~~~~--~~~  122 (241)
                      ++.+++|+||+|++|...++.+...|.+|+++++++++.+.+.+.   .+... .  .|..+...+.+.+.....  +++
T Consensus         4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (246)
T PRK05653          4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL   83 (246)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            356899999999999999999888999999999988775544322   23221 1  344443233333333211  368


Q ss_pred             cEEEeCCCc
Q 026217          123 NIYFENVGG  131 (241)
Q Consensus       123 d~v~d~~g~  131 (241)
                      |.++.++|.
T Consensus        84 d~vi~~ag~   92 (246)
T PRK05653         84 DILVNNAGI   92 (246)
T ss_pred             CEEEECCCc
Confidence            999999863

>PRK06172 short chain dehydrogenase; Provisional

Probab=97.62  E-value=0.00042  Score=54.01  Aligned_cols=80  Identities=15%  Similarity=0.206  Sum_probs=53.1

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCC-e--eecCCCchhHHHHHHHHC--CCCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFD-E--AFNYKEEPDLDAALKRYF--PEGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~---~~g~~-~--~i~~~~~~~~~~~i~~~~--~~~~  122 (241)
                      ++.+++|+||+|++|...++.+...|++|+++++++++.+.+.+   +.+.. .  ..|..+..++...+.+..  -+++
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   85 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL   85 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            46799999999999999998888899999999998876544332   23321 1  234443312322222221  1368


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |+++++.|
T Consensus        86 d~li~~ag   93 (253)
T PRK06172         86 DYAFNNAG   93 (253)
T ss_pred             CEEEECCC
Confidence            99999887

>PRK06720 hypothetical protein; Provisional

Probab=97.61  E-value=0.00061  Score=49.80  Aligned_cols=80  Identities=14%  Similarity=0.253  Sum_probs=51.7

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC-e--eecCCCchhHHHHHHHHC--CCCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYF--PEGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~--~i~~~~~~~~~~~i~~~~--~~~~  122 (241)
                      .+.+++|+||++++|...+..+...|++|++++++++..+...+++   +.. .  ..|..+..++.+.+....  -+++
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~i   94 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRI   94 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999999999999999888889999999998877654432232   322 1  223333212222222211  1368


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |++++++|
T Consensus        95 DilVnnAG  102 (169)
T PRK06720         95 DMLFQNAG  102 (169)
T ss_pred             CEEEECCC
Confidence            99998887

>PRK05875 short chain dehydrogenase; Provisional

Probab=97.60  E-value=0.00063  Score=53.75  Aligned_cols=80  Identities=14%  Similarity=0.106  Sum_probs=53.4

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC-----CC-ee--ecCCCchhHHHHHHHHCC--C
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFG-----FD-EA--FNYKEEPDLDAALKRYFP--E  120 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g-----~~-~~--i~~~~~~~~~~~i~~~~~--~  120 (241)
                      ++.+++|+||+|++|..+++.+...|++|+++++++++.+...+++.     .. .+  .|..+..++...+.+...  +
T Consensus         6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   85 (276)
T PRK05875          6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHG   85 (276)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            36789999999999999999999999999999988776544432321     11 11  244333133333333221  3


Q ss_pred             CccEEEeCCC
Q 026217          121 GINIYFENVG  130 (241)
Q Consensus       121 ~~d~v~d~~g  130 (241)
                      ++|+++.++|
T Consensus        86 ~~d~li~~ag   95 (276)
T PRK05875         86 RLHGVVHCAG   95 (276)
T ss_pred             CCCEEEECCC
Confidence            6999999887

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=97.60  E-value=0.00062  Score=53.29  Aligned_cols=79  Identities=23%  Similarity=0.232  Sum_probs=52.0

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC---eeecCCCchhHHHHHHHHC--CCCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEPDLDAALKRYF--PEGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~~i~~~~~~~~~~~i~~~~--~~~~  122 (241)
                      .+.+++|+||+|++|.+.++.+...|++|+++++++...+... ++   +.+   ...|..+..+....+.+..  -+++
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   85 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAA-ELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRI   85 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHH-HHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999999999999999999999999999998754333222 32   322   1234444313333333321  1369


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |++++++|
T Consensus        86 d~lv~nAg   93 (260)
T PRK12823         86 DVLINNVG   93 (260)
T ss_pred             eEEEECCc
Confidence            99999987

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=97.59  E-value=0.00053  Score=54.30  Aligned_cols=80  Identities=14%  Similarity=0.250  Sum_probs=53.9

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC-e--eecCCCchhHHHHHHHHCC--CCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYFP--EGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~--~i~~~~~~~~~~~i~~~~~--~~~  122 (241)
                      .+.+++|+||+|++|++.++.+...|++|+++++++++.+.+.+++   +.. .  ..|..+..++...+.....  +++
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   88 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC   88 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999999999999999999999999999998877655443232   321 1  2344333123333332211  379


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |++++++|
T Consensus        89 d~li~~ag   96 (278)
T PRK08277         89 DILINGAG   96 (278)
T ss_pred             CEEEECCC
Confidence            99999987

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=97.59  E-value=0.00053  Score=53.65  Aligned_cols=81  Identities=17%  Similarity=0.252  Sum_probs=54.0

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCCe---eecCCCchhHHHHHHHHC--CCCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDE---AFNYKEEPDLDAALKRYF--PEGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~---~g~~~---~i~~~~~~~~~~~i~~~~--~~~~  122 (241)
                      ++.+++|+||+|++|..+++.+...|++|+++++++++.+.+.++   .+...   ..|..+...+.+.+....  .+++
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   85 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV   85 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            467899999999999999999999999999999988665544323   33321   124444312322222221  1369


Q ss_pred             cEEEeCCCc
Q 026217          123 NIYFENVGG  131 (241)
Q Consensus       123 d~v~d~~g~  131 (241)
                      |+++.++|.
T Consensus        86 d~vi~~ag~   94 (262)
T PRK13394         86 DILVSNAGI   94 (262)
T ss_pred             CEEEECCcc
Confidence            999998873

>PRK08628 short chain dehydrogenase; Provisional

Probab=97.58  E-value=0.00058  Score=53.39  Aligned_cols=79  Identities=13%  Similarity=0.162  Sum_probs=53.5

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCC---eeecCCCchhHHHHHHHHCC--CCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFD---EAFNYKEEPDLDAALKRYFP--EGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~---~g~~---~~i~~~~~~~~~~~i~~~~~--~~~  122 (241)
                      ++.+++|+||+|++|...++.+...|++|+++++++++.+... +   .+..   ...|..+..++...+.+...  +++
T Consensus         6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (258)
T PRK08628          6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAE-ELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI   84 (258)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHH-HHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            4678999999999999999988889999999998877654333 3   2322   12344443133333333221  379


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |+++.++|
T Consensus        85 d~vi~~ag   92 (258)
T PRK08628         85 DGLVNNAG   92 (258)
T ss_pred             CEEEECCc
Confidence            99999998

>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function

Probab=97.58  E-value=0.0018  Score=51.64  Aligned_cols=96  Identities=20%  Similarity=0.194  Sum_probs=70.4

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHH-Hc-CCEEEEEeCCHHHHHHHHHHcCC-CeeecCCCchhHHHHHHHHCCCCccEEEe
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAK-LV-GCYVVGSAGSKDKVDLLKNKFGF-DEAFNYKEEPDLDAALKRYFPEGINIYFE  127 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~-~~-g~~v~~~~~~~~~~~~~~~~~g~-~~~i~~~~~~~~~~~i~~~~~~~~d~v~d  127 (241)
                      ..+.|+|.+|++-+++.+..+++ .. +.++++++ |+.+.++.+ .+|+ |.++.|++       |.++.....-+++|
T Consensus       135 ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglT-S~~N~~Fve-~lg~Yd~V~~Yd~-------i~~l~~~~~~v~VD  205 (314)
T PF11017_consen  135 GAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLT-SARNVAFVE-SLGCYDEVLTYDD-------IDSLDAPQPVVIVD  205 (314)
T ss_pred             CccEEEEeccchHHHHHHHHHhhccCCCceEEEEe-cCcchhhhh-ccCCceEEeehhh-------hhhccCCCCEEEEE
Confidence            45789999999999999888888 34 45999999 778888888 9997 67877753       44443346778999


Q ss_pred             CCCc-hhHHHHHHhhccC-CEEEEEeeecc
Q 026217          128 NVGG-KMLDAVLLNMRIQ-GRITLCGMISQ  155 (241)
Q Consensus       128 ~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~  155 (241)
                      +.|+ +....+.+.++.. -..+.+|....
T Consensus       206 faG~~~~~~~Lh~~l~d~l~~~~~VG~th~  235 (314)
T PF11017_consen  206 FAGNGEVLAALHEHLGDNLVYSCLVGATHW  235 (314)
T ss_pred             CCCCHHHHHHHHHHHhhhhhEEEEEEccCc
Confidence            9997 4555666666664 35667776553

>PRK06125 short chain dehydrogenase; Provisional

Probab=97.58  E-value=0.00055  Score=53.60  Aligned_cols=78  Identities=22%  Similarity=0.351  Sum_probs=53.8

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----CCC-e--eecCCCchhHHHHHHHHCCCCcc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF----GFD-E--AFNYKEEPDLDAALKRYFPEGIN  123 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~----g~~-~--~i~~~~~~~~~~~i~~~~~~~~d  123 (241)
                      .+.+++|+|+++++|...++.+...|++|+++++++++.+.+.+++    +.. .  ..|..+..++...+...  +.+|
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~--g~id   83 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEA--GDID   83 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHh--CCCC
Confidence            4689999999999999999998889999999999887665544232    221 1  23444331333333222  3699


Q ss_pred             EEEeCCC
Q 026217          124 IYFENVG  130 (241)
Q Consensus       124 ~v~d~~g  130 (241)
                      +++++.|
T Consensus        84 ~lv~~ag   90 (259)
T PRK06125         84 ILVNNAG   90 (259)
T ss_pred             EEEECCC
Confidence            9999887

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=97.57  E-value=0.0008  Score=52.02  Aligned_cols=80  Identities=23%  Similarity=0.380  Sum_probs=54.0

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC-e--eecCCCchhHHHHHHHHCC--CCccEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-E--AFNYKEEPDLDAALKRYFP--EGINIY  125 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~-~--~i~~~~~~~~~~~i~~~~~--~~~d~v  125 (241)
                      ++.+++|+||+|++|..+++.+...|+.|+...++.++.+.+.+.++.. .  ..|..+...+...+.+...  +++|.+
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   84 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDIL   84 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4678999999999999999999889999988888877766654344432 1  2333333123222222211  369999


Q ss_pred             EeCCC
Q 026217          126 FENVG  130 (241)
Q Consensus       126 ~d~~g  130 (241)
                      +.++|
T Consensus        85 i~~ag   89 (245)
T PRK12936         85 VNNAG   89 (245)
T ss_pred             EECCC
Confidence            99987

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.57  E-value=0.00072  Score=53.07  Aligned_cols=80  Identities=13%  Similarity=0.199  Sum_probs=51.8

Q ss_pred             CCcEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHHcCCCe--eecCCCchhHHHHHHHHCC--CC
Q 026217           51 QGEYVFVSAASG--AVGQLVGQFAKLVGCYVVGSAGSKD---KVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFP--EG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g--~~G~~avqla~~~g~~v~~~~~~~~---~~~~~~~~~g~~~--~i~~~~~~~~~~~i~~~~~--~~  121 (241)
                      .+.+++|+||++  ++|.+.++.+...|++|+.+.++++   ..+.+.++.|...  ..|-.+..+....+.+...  +.
T Consensus         7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   86 (260)
T PRK06603          7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGS   86 (260)
T ss_pred             CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            567899999986  8999999888889999999887642   2333332334322  2355544233333333322  37


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|++++++|
T Consensus        87 iDilVnnag   95 (260)
T PRK06603         87 FDFLLHGMA   95 (260)
T ss_pred             ccEEEEccc
Confidence            999999886

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=97.57  E-value=0.0017  Score=46.53  Aligned_cols=101  Identities=19%  Similarity=0.239  Sum_probs=65.5

Q ss_pred             HHHHHHHHhcC-CCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHH
Q 026217           38 TAYAGFFEVCS-PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKR  116 (241)
Q Consensus        38 ta~~~l~~~~~-~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~  116 (241)
                      ..+.++.+..+ .-.|.+++|.|- |-+|.-.++.++.+|++|+++...|-+.-.+. .-|.. +.      ++.+.+. 
T Consensus         8 S~~d~i~r~t~~~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~-~dGf~-v~------~~~~a~~-   77 (162)
T PF00670_consen    8 SLVDGIMRATNLMLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRALQAA-MDGFE-VM------TLEEALR-   77 (162)
T ss_dssp             HHHHHHHHHH-S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHH-HTT-E-EE-------HHHHTT-
T ss_pred             hHHHHHHhcCceeeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHHHHhh-hcCcE-ec------CHHHHHh-
Confidence            34555555544 457899999995 99999999999999999999998886665555 44543 21      3333332 


Q ss_pred             HCCCCccEEEeCCCchh--HHHHHHhhccCCEEEEEee
Q 026217          117 YFPEGINIYFENVGGKM--LDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       117 ~~~~~~d~v~d~~g~~~--~~~~~~~l~~~G~~v~~g~  152 (241)
                          ..|+++.++|...  -...++.|+++..++.+|.
T Consensus        78 ----~adi~vtaTG~~~vi~~e~~~~mkdgail~n~Gh  111 (162)
T PF00670_consen   78 ----DADIFVTATGNKDVITGEHFRQMKDGAILANAGH  111 (162)
T ss_dssp             ----T-SEEEE-SSSSSSB-HHHHHHS-TTEEEEESSS
T ss_pred             ----hCCEEEECCCCccccCHHHHHHhcCCeEEeccCc
Confidence                4899999999754  3577888988888877765

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=97.57  E-value=0.00079  Score=52.52  Aligned_cols=80  Identities=19%  Similarity=0.282  Sum_probs=53.9

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC---eeecCCCchhHHHHHHHHC--CCCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEPDLDAALKRYF--PEGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~~i~~~~~~~~~~~i~~~~--~~~~  122 (241)
                      ++.+++|+||+|++|...++.+...|.+|+++++++++.+.+.+++   +..   ...|..+..++...+....  .+++
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   82 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV   82 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            3578999999999999999988889999999999887665543232   321   1234444323333333221  1369


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |+++.++|
T Consensus        83 d~vi~~a~   90 (258)
T PRK12429         83 DILVNNAG   90 (258)
T ss_pred             CEEEECCC
Confidence            99999886

>PRK07074 short chain dehydrogenase; Provisional

Probab=97.57  E-value=0.0008  Score=52.55  Aligned_cols=79  Identities=19%  Similarity=0.252  Sum_probs=53.5

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC--e--eecCCCchhHHHHHHHHCC--CCccEE
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD--E--AFNYKEEPDLDAALKRYFP--EGINIY  125 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~--~--~i~~~~~~~~~~~i~~~~~--~~~d~v  125 (241)
                      +.+++|+||+|++|...+..+...|++|+++++++++.+.+.+++...  +  ..|..+...+...+.....  +++|++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   81 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL   81 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            458999999999999999888888999999999887766555343211  1  2344443123333332211  369999


Q ss_pred             EeCCC
Q 026217          126 FENVG  130 (241)
Q Consensus       126 ~d~~g  130 (241)
                      +.+.|
T Consensus        82 i~~ag   86 (257)
T PRK07074         82 VANAG   86 (257)
T ss_pred             EECCC
Confidence            99997

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.56  E-value=0.00096  Score=55.79  Aligned_cols=78  Identities=15%  Similarity=0.181  Sum_probs=55.8

Q ss_pred             cCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEE
Q 026217           47 CSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIY  125 (241)
Q Consensus        47 ~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v  125 (241)
                      .+--.+.+++|.|+ |++|.+++..+...|+ +++++.|+.++.+.+.++++...++.+.   ++.+.+.     .+|+|
T Consensus       176 ~~~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~---~l~~~l~-----~aDiV  246 (414)
T PRK13940        176 LDNISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLS---ELPQLIK-----KADII  246 (414)
T ss_pred             hcCccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHH---HHHHHhc-----cCCEE
Confidence            33346788999996 9999999999999997 8999999988877776567522232221   2222222     49999


Q ss_pred             EeCCCchh
Q 026217          126 FENVGGKM  133 (241)
Q Consensus       126 ~d~~g~~~  133 (241)
                      |+|++++.
T Consensus       247 I~aT~a~~  254 (414)
T PRK13940        247 IAAVNVLE  254 (414)
T ss_pred             EECcCCCC
Confidence            99999753

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.55  E-value=0.00072  Score=53.47  Aligned_cols=82  Identities=11%  Similarity=0.184  Sum_probs=53.5

Q ss_pred             CCCCcEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHHHcCCCe--eecCCCchhHHHHHHHHCC--
Q 026217           49 PKQGEYVFVSAAS--GAVGQLVGQFAKLVGCYVVGSAGSK---DKVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFP--  119 (241)
Q Consensus        49 ~~~~~~vlI~ga~--g~~G~~avqla~~~g~~v~~~~~~~---~~~~~~~~~~g~~~--~i~~~~~~~~~~~i~~~~~--  119 (241)
                      .-.+.+++|+||+  +++|++.++.+...|++|+.+.+++   ++.+.+.++++...  ..|..+..+....+.+...  
T Consensus         7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   86 (272)
T PRK08159          7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKW   86 (272)
T ss_pred             cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhc
Confidence            3456899999986  7999999999999999999887764   33444443455321  2344443233333333221  


Q ss_pred             CCccEEEeCCC
Q 026217          120 EGINIYFENVG  130 (241)
Q Consensus       120 ~~~d~v~d~~g  130 (241)
                      +++|++++++|
T Consensus        87 g~iD~lv~nAG   97 (272)
T PRK08159         87 GKLDFVVHAIG   97 (272)
T ss_pred             CCCcEEEECCc
Confidence            37999999987

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=97.55  E-value=0.00069  Score=52.88  Aligned_cols=81  Identities=20%  Similarity=0.271  Sum_probs=54.7

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCC---eeecCCCchhHHHHHHHHCC--CCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFD---EAFNYKEEPDLDAALKRYFP--EGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~---~g~~---~~i~~~~~~~~~~~i~~~~~--~~~  122 (241)
                      ++.+++|+||+|++|...++.+...|++|+.+++++++.+.+.++   .+..   ...|..+..++...+.....  +++
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   89 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRL   89 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            578999999999999999998888999999999987765544322   2321   12344443233333333211  368


Q ss_pred             cEEEeCCCc
Q 026217          123 NIYFENVGG  131 (241)
Q Consensus       123 d~v~d~~g~  131 (241)
                      |.++.+.|.
T Consensus        90 d~vi~~ag~   98 (256)
T PRK06124         90 DILVNNVGA   98 (256)
T ss_pred             CEEEECCCC
Confidence            999998873

>PRK12937 short chain dehydrogenase; Provisional

Probab=97.54  E-value=0.0021  Score=49.77  Aligned_cols=80  Identities=15%  Similarity=0.128  Sum_probs=49.8

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHH---HcCCC-e--eecCCCchhHHHHHHHHC--CCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD-KVDLLKN---KFGFD-E--AFNYKEEPDLDAALKRYF--PEG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~-~~~~~~~---~~g~~-~--~i~~~~~~~~~~~i~~~~--~~~  121 (241)
                      ++.+++|+||+|++|...++.+...|++|+.+.++.. ..+.+.+   ..+.. .  ..|..+..++.+.+.+..  -++
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGR   83 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999999999999999999999998887775432 2222221   23321 1  224343313333333221  136


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|+++.++|
T Consensus        84 id~vi~~ag   92 (245)
T PRK12937         84 IDVLVNNAG   92 (245)
T ss_pred             CCEEEECCC
Confidence            999999887

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=97.54  E-value=0.00064  Score=52.76  Aligned_cols=80  Identities=18%  Similarity=0.231  Sum_probs=52.1

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCC-e--eecCCCchhHHHHHHHHCC--CCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFD-E--AFNYKEEPDLDAALKRYFP--EGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~---~~g~~-~--~i~~~~~~~~~~~i~~~~~--~~~  122 (241)
                      .+.+++|+||+|++|...+..+...|++|+++++++++.....+   ..+.. .  ..|..+..++...+.....  +.+
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   84 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL   84 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            45789999999999999998888889999999998665443321   22221 1  2244443233333332211  369


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |.++.+.|
T Consensus        85 d~vi~~ag   92 (251)
T PRK12826         85 DILVANAG   92 (251)
T ss_pred             CEEEECCC
Confidence            99999886

>COG4122 Predicted O-methyltransferase [General function prediction only]

Probab=97.54  E-value=0.0023  Score=48.42  Aligned_cols=103  Identities=14%  Similarity=0.134  Sum_probs=74.4

Q ss_pred             HhcCCCCCcEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHH---cCCCe-eecCCCchhHHHHHHHHC
Q 026217           45 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKNK---FGFDE-AFNYKEEPDLDAALKRYF  118 (241)
Q Consensus        45 ~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g--~~v~~~~~~~~~~~~~~~~---~g~~~-~i~~~~~~~~~~~i~~~~  118 (241)
                      ..+..+...+||-.|  +.+|..++.+|..+.  .+++.+.++++..+.+++.   .|.+. +.-.... +..+.+.+..
T Consensus        53 ~L~~~~~~k~iLEiG--T~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~g-dal~~l~~~~  129 (219)
T COG4122          53 LLARLSGPKRILEIG--TAIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGG-DALDVLSRLL  129 (219)
T ss_pred             HHHHhcCCceEEEee--cccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecC-cHHHHHHhcc
Confidence            345677888999998  889999999999885  4899999999988888743   45543 2111112 4455555533


Q ss_pred             CCCccEEE-eCCCc---hhHHHHHHhhccCCEEEEE
Q 026217          119 PEGINIYF-ENVGG---KMLDAVLLNMRIQGRITLC  150 (241)
Q Consensus       119 ~~~~d~v~-d~~g~---~~~~~~~~~l~~~G~~v~~  150 (241)
                      .+.||+|| |+.-.   ..+..+++.|++||.++.-
T Consensus       130 ~~~fDliFIDadK~~yp~~le~~~~lLr~GGliv~D  165 (219)
T COG4122         130 DGSFDLVFIDADKADYPEYLERALPLLRPGGLIVAD  165 (219)
T ss_pred             CCCccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEe
Confidence            45899886 55543   5788999999999988864

>PRK12367 short chain dehydrogenase; Provisional

Probab=97.52  E-value=0.00093  Score=51.99  Aligned_cols=74  Identities=23%  Similarity=0.372  Sum_probs=49.2

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHHHcCCCe--eecCCCchhHHHHHHHHCCCCccEEEe
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK-DKVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFPEGINIYFE  127 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~-~~~~~~~~~~g~~~--~i~~~~~~~~~~~i~~~~~~~~d~v~d  127 (241)
                      .+.+++|+||+|++|..+++.+...|++|+++++++ +..+... . +...  ..|..+.    +.+.+.. +++|++++
T Consensus        13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~-~-~~~~~~~~D~~~~----~~~~~~~-~~iDilVn   85 (245)
T PRK12367         13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESND-E-SPNEWIKWECGKE----ESLDKQL-ASLDVLIL   85 (245)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhc-c-CCCeEEEeeCCCH----HHHHHhc-CCCCEEEE
Confidence            367899999999999999999999999999999876 2222211 1 1111  2233332    2233322 36999999


Q ss_pred             CCCc
Q 026217          128 NVGG  131 (241)
Q Consensus       128 ~~g~  131 (241)
                      ++|.
T Consensus        86 nAG~   89 (245)
T PRK12367         86 NHGI   89 (245)
T ss_pred             CCcc
Confidence            9973

>PRK04148 hypothetical protein; Provisional

Probab=97.52  E-value=0.0012  Score=45.90  Aligned_cols=86  Identities=13%  Similarity=0.091  Sum_probs=55.0

Q ss_pred             CCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCC-CchhHHHHHHHHCCCCccEEE
Q 026217           48 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYK-EEPDLDAALKRYFPEGINIYF  126 (241)
Q Consensus        48 ~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~-~~~~~~~~i~~~~~~~~d~v~  126 (241)
                      ...++.++++.| .| .|...++.+...|..|++++.+++..+.++ +.+.+.+.+.- ++ ++  .+.    +++|.++
T Consensus        13 ~~~~~~kileIG-~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~-~~~~~~v~dDlf~p-~~--~~y----~~a~liy   82 (134)
T PRK04148         13 EKGKNKKIVELG-IG-FYFKVAKKLKESGFDVIVIDINEKAVEKAK-KLGLNAFVDDLFNP-NL--EIY----KNAKLIY   82 (134)
T ss_pred             ccccCCEEEEEE-ec-CCHHHHHHHHHCCCEEEEEECCHHHHHHHH-HhCCeEEECcCCCC-CH--HHH----hcCCEEE
Confidence            334567899999 47 887566666688999999999999999998 77764332211 11 11  111    2578887


Q ss_pred             eCCCc-hhHHHHHHhhcc
Q 026217          127 ENVGG-KMLDAVLLNMRI  143 (241)
Q Consensus       127 d~~g~-~~~~~~~~~l~~  143 (241)
                      .+-.. +....++++.+.
T Consensus        83 sirpp~el~~~~~~la~~  100 (134)
T PRK04148         83 SIRPPRDLQPFILELAKK  100 (134)
T ss_pred             EeCCCHHHHHHHHHHHHH
Confidence            77664 444444444443

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.52  E-value=0.00096  Score=52.29  Aligned_cols=80  Identities=11%  Similarity=0.166  Sum_probs=51.7

Q ss_pred             CCcEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCHHH---HHHHHHHcCCCee--ecCCCchhHHHHHHHHCC--CC
Q 026217           51 QGEYVFVSAAS--GAVGQLVGQFAKLVGCYVVGSAGSKDK---VDLLKNKFGFDEA--FNYKEEPDLDAALKRYFP--EG  121 (241)
Q Consensus        51 ~~~~vlI~ga~--g~~G~~avqla~~~g~~v~~~~~~~~~---~~~~~~~~g~~~~--i~~~~~~~~~~~i~~~~~--~~  121 (241)
                      .+.+++|+||+  +++|.++++.+...|++|+++.++++.   .+.+.++++....  .|..+..++...+.....  ++
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   88 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGR   88 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCC
Confidence            46899999997  499999999998999999999887543   2333324443222  243333233333332221  47


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|++++++|
T Consensus        89 ld~lv~nAg   97 (258)
T PRK07533         89 LDFLLHSIA   97 (258)
T ss_pred             CCEEEEcCc
Confidence            999999887

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=97.52  E-value=0.00079  Score=54.41  Aligned_cols=79  Identities=13%  Similarity=0.180  Sum_probs=54.0

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHcCC--C--e--eecCCCchhHHHHHHHHC--CCCc
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKDKVDLLKNKFGF--D--E--AFNYKEEPDLDAALKRYF--PEGI  122 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g-~~v~~~~~~~~~~~~~~~~~g~--~--~--~i~~~~~~~~~~~i~~~~--~~~~  122 (241)
                      +.+++|+||++++|.++++.+...| ++|+.+++++++.+.+.++++.  .  .  ..|..+..++...+.+..  .+++
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   82 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL   82 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            5689999999999999998888889 8999999988776655545432  1  1  234444312333333221  2379


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |++++++|
T Consensus        83 D~lI~nAG   90 (314)
T TIGR01289        83 DALVCNAA   90 (314)
T ss_pred             CEEEECCC
Confidence            99999887

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK06101 short chain dehydrogenase; Provisional

Probab=97.52  E-value=0.0014  Score=50.63  Aligned_cols=76  Identities=21%  Similarity=0.311  Sum_probs=50.9

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC---eeecCCCchhHHHHHHHHCCCCccEEEeCC
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEPDLDAALKRYFPEGINIYFENV  129 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~---~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~  129 (241)
                      .+++|+||+|++|...+..+...|++|+++++++++.+.+. ..+..   ...|..+..++.+.+... ....|.++.++
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~-~~~~d~~i~~a   79 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELH-TQSANIFTLAFDVTDHPGTKAALSQL-PFIPELWIFNA   79 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HhcCCCeEEEeeCCCHHHHHHHHHhc-ccCCCEEEEcC
Confidence            46899999999999988888889999999999988877666 32211   123444442343333332 22467766666


Q ss_pred             C
Q 026217          130 G  130 (241)
Q Consensus       130 g  130 (241)
                      |
T Consensus        80 g   80 (240)
T PRK06101         80 G   80 (240)
T ss_pred             c
Confidence            5

>PRK07985 oxidoreductase; Provisional

Probab=97.52  E-value=0.0014  Score=52.40  Aligned_cols=80  Identities=14%  Similarity=0.106  Sum_probs=50.6

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHHH---HcCCC---eeecCCCchhHHHHHHHHCC--C
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK--DKVDLLKN---KFGFD---EAFNYKEEPDLDAALKRYFP--E  120 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~--~~~~~~~~---~~g~~---~~i~~~~~~~~~~~i~~~~~--~  120 (241)
                      .+.+++|+||++++|.+.++.+...|++|+++.++.  +..+.+.+   +.+..   ...|..+..++...+.+...  +
T Consensus        48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  127 (294)
T PRK07985         48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALG  127 (294)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            567899999999999999999999999999877542  23333321   22322   12344443233333333221  3


Q ss_pred             CccEEEeCCC
Q 026217          121 GINIYFENVG  130 (241)
Q Consensus       121 ~~d~v~d~~g  130 (241)
                      ++|+++++.|
T Consensus       128 ~id~lv~~Ag  137 (294)
T PRK07985        128 GLDIMALVAG  137 (294)
T ss_pred             CCCEEEECCC
Confidence            7999999876

>PRK07856 short chain dehydrogenase; Provisional

Probab=97.52  E-value=0.00068  Score=52.84  Aligned_cols=75  Identities=16%  Similarity=0.251  Sum_probs=51.1

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC--C-eeecCCCchhHHHHHHHHC--CCCccEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF--D-EAFNYKEEPDLDAALKRYF--PEGINIY  125 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~--~-~~i~~~~~~~~~~~i~~~~--~~~~d~v  125 (241)
                      .+.+++|+||+|++|...++.+...|++|+++++++++    . ..+.  . ...|..+..++...+....  -+++|++
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~----~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   79 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE----T-VDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVL   79 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh----h-hcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            47899999999999999999998999999999987654    1 2222  1 1234444323333333221  1368999


Q ss_pred             EeCCC
Q 026217          126 FENVG  130 (241)
Q Consensus       126 ~d~~g  130 (241)
                      +.++|
T Consensus        80 i~~ag   84 (252)
T PRK07856         80 VNNAG   84 (252)
T ss_pred             EECCC
Confidence            99887

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.51  E-value=0.00081  Score=52.63  Aligned_cols=80  Identities=15%  Similarity=0.240  Sum_probs=52.5

Q ss_pred             CCcEEEEEcC--CchHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHHHHcCCC---eeecCCCchhHHHHHHHHC--CCC
Q 026217           51 QGEYVFVSAA--SGAVGQLVGQFAKLVGCYVVGSAGSK--DKVDLLKNKFGFD---EAFNYKEEPDLDAALKRYF--PEG  121 (241)
Q Consensus        51 ~~~~vlI~ga--~g~~G~~avqla~~~g~~v~~~~~~~--~~~~~~~~~~g~~---~~i~~~~~~~~~~~i~~~~--~~~  121 (241)
                      .+.+++|+||  ++++|++.++.+...|++|++++++.  +..+.+.++++..   ...|..+..++...+.+..  -++
T Consensus         6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   85 (256)
T PRK07889          6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDG   85 (256)
T ss_pred             cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999998  79999999998888999999998653  3344444345431   1234444323333333222  147


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|++++++|
T Consensus        86 iD~li~nAG   94 (256)
T PRK07889         86 LDGVVHSIG   94 (256)
T ss_pred             CcEEEEccc
Confidence            999999887

>PRK06114 short chain dehydrogenase; Provisional

Probab=97.51  E-value=0.00088  Score=52.30  Aligned_cols=80  Identities=21%  Similarity=0.202  Sum_probs=51.4

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHH---HcCCC---eeecCCCchhHHHHHHHHC--CCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD-KVDLLKN---KFGFD---EAFNYKEEPDLDAALKRYF--PEG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~-~~~~~~~---~~g~~---~~i~~~~~~~~~~~i~~~~--~~~  121 (241)
                      .+.+++|+||++++|.++++.+...|++|++++++++ ..+.+.+   ..+..   ...|..++.++...+.+..  -++
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   86 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA   86 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999999999999999999999999999987643 2222221   22321   1224444313333333321  147


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|+++++.|
T Consensus        87 id~li~~ag   95 (254)
T PRK06114         87 LTLAVNAAG   95 (254)
T ss_pred             CCEEEECCC
Confidence            999999997

>PRK07791 short chain dehydrogenase; Provisional

Probab=97.50  E-value=0.00077  Score=53.70  Aligned_cols=81  Identities=16%  Similarity=0.218  Sum_probs=52.2

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH---------HHHHHHHHHc---CCC---eeecCCCchhHHHHH
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK---------DKVDLLKNKF---GFD---EAFNYKEEPDLDAAL  114 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~---------~~~~~~~~~~---g~~---~~i~~~~~~~~~~~i  114 (241)
                      -++.+++|+||++++|.+.++.+...|++|++++++.         ++.+.+.+++   +..   ...|..+..++...+
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~   83 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV   83 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence            3578999999999999999999888999999887654         3333332232   322   122444432333333


Q ss_pred             HHHCC--CCccEEEeCCC
Q 026217          115 KRYFP--EGINIYFENVG  130 (241)
Q Consensus       115 ~~~~~--~~~d~v~d~~g  130 (241)
                      .....  +++|++++++|
T Consensus        84 ~~~~~~~g~id~lv~nAG  101 (286)
T PRK07791         84 DAAVETFGGLDVLVNNAG  101 (286)
T ss_pred             HHHHHhcCCCCEEEECCC
Confidence            33221  47999999887

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=97.50  E-value=0.0015  Score=47.49  Aligned_cols=93  Identities=17%  Similarity=0.237  Sum_probs=64.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC--CeeecCCCchhHHHHHHHHCCCCccEEEeCCCc
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF--DEAFNYKEEPDLDAALKRYFPEGINIYFENVGG  131 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~--~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~  131 (241)
                      .|.|+||+|-+|...++-|+..|..|++++|++.+....+ ..-+  ..++|..   .+.+.+     .++|+|+++.|.
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~-~~~i~q~Difd~~---~~a~~l-----~g~DaVIsA~~~   72 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQ-GVTILQKDIFDLT---SLASDL-----AGHDAVISAFGA   72 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccccc-cceeecccccChh---hhHhhh-----cCCceEEEeccC
Confidence            4889999999999999999999999999999998886543 2211  1233321   122222     269999998874


Q ss_pred             h----------hHHHHHHhhccC--CEEEEEeeecc
Q 026217          132 K----------MLDAVLLNMRIQ--GRITLCGMISQ  155 (241)
Q Consensus       132 ~----------~~~~~~~~l~~~--G~~v~~g~~~~  155 (241)
                      .          ..+.+...|+.-  -|+..+|..++
T Consensus        73 ~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAGS  108 (211)
T COG2910          73 GASDNDELHSKSIEALIEALKGAGVPRLLVVGGAGS  108 (211)
T ss_pred             CCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCccc
Confidence            2          223355556552  48888887654

>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]

Probab=97.49  E-value=0.00045  Score=54.13  Aligned_cols=107  Identities=21%  Similarity=0.274  Sum_probs=78.0

Q ss_pred             hhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCC---ee--ecCCC
Q 026217           35 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFD---EA--FNYKE  106 (241)
Q Consensus        35 ~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~---~g~~---~~--i~~~~  106 (241)
                      +=..++..+.+..+++||++||=+|  .|-|.+++-.|+..|++|++++-|+++.+.+++.   .|..   ++  -|+++
T Consensus        56 AQ~~k~~~~~~kl~L~~G~~lLDiG--CGWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d~rd  133 (283)
T COG2230          56 AQRAKLDLILEKLGLKPGMTLLDIG--CGWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQDYRD  133 (283)
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEeC--CChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCCcccEEEeccccc
Confidence            3345666777888999999999999  7889999999999999999999999998888743   3432   11  12221


Q ss_pred             chhHHHHHHHHCCCCccEEE-----eCCCc----hhHHHHHHhhccCCEEEEEeeec
Q 026217          107 EPDLDAALKRYFPEGINIYF-----ENVGG----KMLDAVLLNMRIQGRITLCGMIS  154 (241)
Q Consensus       107 ~~~~~~~i~~~~~~~~d~v~-----d~~g~----~~~~~~~~~l~~~G~~v~~g~~~  154 (241)
                                .. +.||-|+     +-+|.    ..+..+.++|+++|++..-....
T Consensus       134 ----------~~-e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~~  179 (283)
T COG2230         134 ----------FE-EPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSITG  179 (283)
T ss_pred             ----------cc-cccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEecC
Confidence                      11 2377664     44553    36788889999999998766543

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=97.49  E-value=0.002  Score=54.14  Aligned_cols=75  Identities=20%  Similarity=0.374  Sum_probs=55.3

Q ss_pred             cCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEE
Q 026217           47 CSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIY  125 (241)
Q Consensus        47 ~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v  125 (241)
                      .+..++.+|+|+|+ |.+|..+++.++..|+ +|+++.++.++.+.+.+++|.. .++..   ++.+.+.     ++|+|
T Consensus       175 ~~~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~-~i~~~---~l~~~l~-----~aDvV  244 (417)
T TIGR01035       175 FGSLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGE-AVKFE---DLEEYLA-----EADIV  244 (417)
T ss_pred             hCCccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCe-EeeHH---HHHHHHh-----hCCEE
Confidence            34467899999996 9999999999999995 8999999988765444377753 33221   3333332     59999


Q ss_pred             EeCCCc
Q 026217          126 FENVGG  131 (241)
Q Consensus       126 ~d~~g~  131 (241)
                      |+|++.
T Consensus       245 i~aT~s  250 (417)
T TIGR01035       245 ISSTGA  250 (417)
T ss_pred             EECCCC
Confidence            999985

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.49  E-value=0.002  Score=51.97  Aligned_cols=100  Identities=18%  Similarity=0.255  Sum_probs=68.9

Q ss_pred             HhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHH---HcCCCeeecCCCchhHHHHHHHHCC
Q 026217           45 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYFP  119 (241)
Q Consensus        45 ~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~--~v~~~~~~~~~~~~~~~---~~g~~~~i~~~~~~~~~~~i~~~~~  119 (241)
                      +...++++++||..|+ | .|..++.+++..+.  .|++++.+++-.+.+++   ..|.+.+.....  +..+.+..  .
T Consensus        74 ~~L~i~~g~~VLDIG~-G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~g--D~~~~~~~--~  147 (322)
T PRK13943         74 EWVGLDKGMRVLEIGG-G-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCG--DGYYGVPE--F  147 (322)
T ss_pred             HhcCCCCCCEEEEEeC-C-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeC--Chhhcccc--c
Confidence            4457889999999994 4 69999999998864  79999999887666653   355543322211  32222211  1


Q ss_pred             CCccEEEeCCCc-hhHHHHHHhhccCCEEEEE
Q 026217          120 EGINIYFENVGG-KMLDAVLLNMRIQGRITLC  150 (241)
Q Consensus       120 ~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~  150 (241)
                      +.+|+|+.+.+. .......+.|+++|+++..
T Consensus       148 ~~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~  179 (322)
T PRK13943        148 APYDVIFVTVGVDEVPETWFTQLKEGGRVIVP  179 (322)
T ss_pred             CCccEEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence            369999988874 4455678899999998764

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.49  E-value=0.0012  Score=52.11  Aligned_cols=84  Identities=17%  Similarity=0.159  Sum_probs=60.4

Q ss_pred             CCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeee--------cCCCchhHHHHHHHHC-
Q 026217           48 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAF--------NYKEEPDLDAALKRYF-  118 (241)
Q Consensus        48 ~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i--------~~~~~~~~~~~i~~~~-  118 (241)
                      ..+|--.|+|+|++.++|++.+..++..|++|.++.++.+++..++.+++....+        |-.+.......++.+. 
T Consensus        29 ~~k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~  108 (331)
T KOG1210|consen   29 KPKPRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRD  108 (331)
T ss_pred             ccCccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhh
Confidence            3455578999999999999999999999999999999999998887666643211        1111102333333332 


Q ss_pred             -CCCccEEEeCCCc
Q 026217          119 -PEGINIYFENVGG  131 (241)
Q Consensus       119 -~~~~d~v~d~~g~  131 (241)
                       .+.+|.+|+|+|.
T Consensus       109 ~~~~~d~l~~cAG~  122 (331)
T KOG1210|consen  109 LEGPIDNLFCCAGV  122 (331)
T ss_pred             ccCCcceEEEecCc
Confidence             2379999999984

>PRK08226 short chain dehydrogenase; Provisional

Probab=97.48  E-value=0.0011  Score=52.04  Aligned_cols=80  Identities=19%  Similarity=0.243  Sum_probs=52.0

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH--HcCCC---eeecCCCchhHHHHHHHHC--CCCcc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN--KFGFD---EAFNYKEEPDLDAALKRYF--PEGIN  123 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~--~~g~~---~~i~~~~~~~~~~~i~~~~--~~~~d  123 (241)
                      ++.+++|+||+|++|...++.+...|++|++++++++..+...+  ..+..   ...|..+..++...+.+..  -+.+|
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   84 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRID   84 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            46789999999999999999999999999999988653333321  22322   1234444313332222221  13699


Q ss_pred             EEEeCCC
Q 026217          124 IYFENVG  130 (241)
Q Consensus       124 ~v~d~~g  130 (241)
                      +++.+.|
T Consensus        85 ~vi~~ag   91 (263)
T PRK08226         85 ILVNNAG   91 (263)
T ss_pred             EEEECCC
Confidence            9999887

>PRK06398 aldose dehydrogenase; Validated

Probab=97.48  E-value=0.00028  Score=55.27  Aligned_cols=75  Identities=15%  Similarity=0.167  Sum_probs=50.4

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCC--CCccEEEeC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFP--EGINIYFEN  128 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~--~~~d~v~d~  128 (241)
                      .+.+++|+||++++|.+.++.+...|++|+++++++++...+. .    ...|..++.++.+.+.+...  +++|+++++
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~-~----~~~D~~~~~~i~~~~~~~~~~~~~id~li~~   79 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYNDVD-Y----FKVDVSNKEQVIKGIDYVISKYGRIDILVNN   79 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccCceE-E----EEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            4679999999999999999999999999999998754322111 1    12344443133333333221  369999998


Q ss_pred             CC
Q 026217          129 VG  130 (241)
Q Consensus       129 ~g  130 (241)
                      +|
T Consensus        80 Ag   81 (258)
T PRK06398         80 AG   81 (258)
T ss_pred             CC
Confidence            87

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=97.48  E-value=0.00079  Score=52.56  Aligned_cols=80  Identities=19%  Similarity=0.275  Sum_probs=54.2

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCC---eeecCCCchhHHHHHHHHCC--CCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFD---EAFNYKEEPDLDAALKRYFP--EGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~---~g~~---~~i~~~~~~~~~~~i~~~~~--~~~  122 (241)
                      .+.+++|+||++++|...+..+...|++|++++++.+..+.+.++   .+..   ...|..+..++.+.+.....  +++
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   89 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKV   89 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            478999999999999999998889999999999887765544322   2322   12344443233333333211  369


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |+++++.|
T Consensus        90 d~li~~ag   97 (255)
T PRK06113         90 DILVNNAG   97 (255)
T ss_pred             CEEEECCC
Confidence            99999887

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=97.47  E-value=0.0014  Score=51.55  Aligned_cols=80  Identities=19%  Similarity=0.270  Sum_probs=53.4

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC---eeecCCCchhHHHHHHHHCC--CCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEPDLDAALKRYFP--EGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~~i~~~~~~~~~~~i~~~~~--~~~  122 (241)
                      ++.+++|+||++++|...+..+...|++|+++.+++++.+.+.+.+   +..   ...|..+...+...+.+...  +++
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   88 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI   88 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            5678999999999999988888889999999998877655443232   322   12344443122222222211  369


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |.++++.|
T Consensus        89 d~li~~ag   96 (265)
T PRK07097         89 DILVNNAG   96 (265)
T ss_pred             CEEEECCC
Confidence            99999987

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=97.47  E-value=0.0012  Score=51.67  Aligned_cols=80  Identities=11%  Similarity=0.226  Sum_probs=50.8

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHH----cCCC---eeecCCCchhHHHHHHHHC--CC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKDKVDLLKNK----FGFD---EAFNYKEEPDLDAALKRYF--PE  120 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~-~~~~~~~~~~~----~g~~---~~i~~~~~~~~~~~i~~~~--~~  120 (241)
                      ++.+++|+||++++|.+.++.+...|++|+.+.+ ++++.+.+.++    .+..   ...|..+..++...+.+..  -+
T Consensus         7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   86 (260)
T PRK08416          7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFD   86 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            5789999999999999999999999999988864 34443332212    2321   1234444323333333222  13


Q ss_pred             CccEEEeCCC
Q 026217          121 GINIYFENVG  130 (241)
Q Consensus       121 ~~d~v~d~~g  130 (241)
                      .+|++++++|
T Consensus        87 ~id~lv~nAg   96 (260)
T PRK08416         87 RVDFFISNAI   96 (260)
T ss_pred             CccEEEECcc
Confidence            6999999885

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=97.46  E-value=0.0012  Score=55.17  Aligned_cols=75  Identities=31%  Similarity=0.386  Sum_probs=50.4

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC-e--eecCCCchhHHHHHHHHCCCCccEEEe
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-E--AFNYKEEPDLDAALKRYFPEGINIYFE  127 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~-~--~i~~~~~~~~~~~i~~~~~~~~d~v~d  127 (241)
                      .+.+++|+||+|++|.+.++.+...|++|+++++++++.+...+..+.. .  ..|..+.    +.+.+.. +++|++++
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~----~~v~~~l-~~IDiLIn  251 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQE----AALAELL-EKVDILII  251 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCH----HHHHHHh-CCCCEEEE
Confidence            4789999999999999999988889999999998876654322121111 1  1233332    2233322 36999999


Q ss_pred             CCC
Q 026217          128 NVG  130 (241)
Q Consensus       128 ~~g  130 (241)
                      ++|
T Consensus       252 nAG  254 (406)
T PRK07424        252 NHG  254 (406)
T ss_pred             CCC
Confidence            876

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=97.46  E-value=0.00076  Score=52.76  Aligned_cols=79  Identities=16%  Similarity=0.209  Sum_probs=51.4

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCC---eeecCCCchhHHHHHHHHC--CCCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFD---EAFNYKEEPDLDAALKRYF--PEGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~---~~g~~---~~i~~~~~~~~~~~i~~~~--~~~~  122 (241)
                      .+.+++|+||++++|...++.+...|++|++++++ ++.+.+.+   +.+..   ...|..+...+...+.+..  -+++
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   92 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKI   92 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999999999877 33333221   23322   1234444312322233221  1369


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |+++++.|
T Consensus        93 d~li~~ag  100 (258)
T PRK06935         93 DILVNNAG  100 (258)
T ss_pred             CEEEECCC
Confidence            99999887

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=97.46  E-value=0.0011  Score=48.53  Aligned_cols=97  Identities=23%  Similarity=0.220  Sum_probs=65.8

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeec-C-----------------CC--chhHHH
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFN-Y-----------------KE--EPDLDA  112 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~-~-----------------~~--~~~~~~  112 (241)
                      -.|+|+|+ |.+|+-|+++++.+|++|++.+..+++.+... ..+...+.. +                 ..  ...+.+
T Consensus        21 ~~vvv~G~-G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~   98 (168)
T PF01262_consen   21 AKVVVTGA-GRVGQGAAEIAKGLGAEVVVPDERPERLRQLE-SLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAE   98 (168)
T ss_dssp             -EEEEEST-SHHHHHHHHHHHHTT-EEEEEESSHHHHHHHH-HTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHH
T ss_pred             eEEEEECC-CHHHHHHHHHHhHCCCEEEeccCCHHHHHhhh-cccCceEEEcccccccccccchhhhhHHHHHhHHHHHH
Confidence            67899995 99999999999999999999999998888887 766643221 0                 01  012334


Q ss_pred             HHHHHCCCCccEEEeCCC--c-h----hHHHHHHhhccCCEEEEEeeeccc
Q 026217          113 ALKRYFPEGINIYFENVG--G-K----MLDAVLLNMRIQGRITLCGMISQY  156 (241)
Q Consensus       113 ~i~~~~~~~~d~v~d~~g--~-~----~~~~~~~~l~~~G~~v~~g~~~~~  156 (241)
                      .+.     .+|+++.+.-  + .    ..+..++.|+++..++.++...+.
T Consensus        99 ~i~-----~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~D~gG  144 (168)
T PF01262_consen   99 FIA-----PADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISCDQGG  144 (168)
T ss_dssp             HHH-----H-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTGGGT-
T ss_pred             HHh-----hCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEecCCC
Confidence            443     3898885442  1 1    346778889988888888775543

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=97.45  E-value=0.00064  Score=49.32  Aligned_cols=78  Identities=17%  Similarity=0.267  Sum_probs=49.5

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC--HHHHHHHHHH---cCCC-ee--ecCCCchhHHHHHHHHC--CCC
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGS--KDKVDLLKNK---FGFD-EA--FNYKEEPDLDAALKRYF--PEG  121 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~--~~~~~~~~~~---~g~~-~~--i~~~~~~~~~~~i~~~~--~~~  121 (241)
                      .+++|+||++++|+..++.+...|. +|+.+.++  .++.+.+.++   .+.. .+  .|..+..++...+....  .+.
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            3799999999999998888877776 88888888  4444444223   3421 12  23333323333333332  237


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|++|.+.|
T Consensus        81 ld~li~~ag   89 (167)
T PF00106_consen   81 LDILINNAG   89 (167)
T ss_dssp             ESEEEEECS
T ss_pred             ccccccccc
Confidence            999999987

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.44  E-value=0.00093  Score=52.46  Aligned_cols=80  Identities=6%  Similarity=0.173  Sum_probs=50.7

Q ss_pred             CCcEEEEEcC--CchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH---HHcCCCe--eecCCCchhHHHHHHHHCC--CC
Q 026217           51 QGEYVFVSAA--SGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK---NKFGFDE--AFNYKEEPDLDAALKRYFP--EG  121 (241)
Q Consensus        51 ~~~~vlI~ga--~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~---~~~g~~~--~i~~~~~~~~~~~i~~~~~--~~  121 (241)
                      ++.+++|+||  ++++|++.++.+...|++|+.+.+++...+.++   ++.+...  ..|..+..++...+.+...  ++
T Consensus         5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   84 (261)
T PRK08690          5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDG   84 (261)
T ss_pred             CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            4678999996  569999999999999999998876543333332   1233222  2344443233333333222  47


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|++++++|
T Consensus        85 iD~lVnnAG   93 (261)
T PRK08690         85 LDGLVHSIG   93 (261)
T ss_pred             CcEEEECCc
Confidence            999999987

>PRK12743 oxidoreductase; Provisional

Probab=97.43  E-value=0.0013  Score=51.43  Aligned_cols=79  Identities=15%  Similarity=0.264  Sum_probs=49.8

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHH---HcCCC-e--eecCCCchhHHHHHHHHCC--CCc
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKDKVDLLKN---KFGFD-E--AFNYKEEPDLDAALKRYFP--EGI  122 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~-~~~~~~~~~~---~~g~~-~--~i~~~~~~~~~~~i~~~~~--~~~  122 (241)
                      +.+++|+||++++|+.+++.+...|++|+.+.+ +.++.+.+.+   ..+.. +  ..|..+..++...+.+...  +++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI   81 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            468999999999999999999999999988764 3333333221   33432 1  2344443123222222211  369


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |+++.+.|
T Consensus        82 d~li~~ag   89 (256)
T PRK12743         82 DVLVNNAG   89 (256)
T ss_pred             CEEEECCC
Confidence            99999887

>PRK12747 short chain dehydrogenase; Provisional

Probab=97.43  E-value=0.0029  Score=49.24  Aligned_cols=105  Identities=18%  Similarity=0.192  Sum_probs=63.0

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHHHc---CCC-e--eecCCCchh---HHHHHHHH---
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSA-GSKDKVDLLKNKF---GFD-E--AFNYKEEPD---LDAALKRY---  117 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~-~~~~~~~~~~~~~---g~~-~--~i~~~~~~~---~~~~i~~~---  117 (241)
                      .+.+++|+||++++|.++++.+...|++|+++. +++++.+.+.+++   +.. .  ..|..+..+   +.+.+.+.   
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN   82 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence            467899999999999999999999999988864 4444443332122   221 1  123322212   22233221   


Q ss_pred             -CC-CCccEEEeCCCch-----------hH---------------HHHHHhhccCCEEEEEeeecc
Q 026217          118 -FP-EGINIYFENVGGK-----------ML---------------DAVLLNMRIQGRITLCGMISQ  155 (241)
Q Consensus       118 -~~-~~~d~v~d~~g~~-----------~~---------------~~~~~~l~~~G~~v~~g~~~~  155 (241)
                       .+ +++|++++++|..           .+               +.+++.+...|+++.++....
T Consensus        83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~  148 (252)
T PRK12747         83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT  148 (252)
T ss_pred             hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccc
Confidence             12 2799999988721           01               224445556789998887543

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=97.43  E-value=0.0014  Score=53.90  Aligned_cols=93  Identities=16%  Similarity=0.108  Sum_probs=64.7

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHcC---C-CeeecCCCchhHHHHHHHHCCCCccEEEe
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKDKVDLLKNKFG---F-DEAFNYKEEPDLDAALKRYFPEGINIYFE  127 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g-~~v~~~~~~~~~~~~~~~~~g---~-~~~i~~~~~~~~~~~i~~~~~~~~d~v~d  127 (241)
                      .+|+|.|+ |++|+.+++.+.+.+ .+|++++|+.++.+.+. ...   . ...+|-.+...+.+-|+     ++|+||+
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~-~~~~~~v~~~~vD~~d~~al~~li~-----~~d~VIn   74 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIA-ELIGGKVEALQVDAADVDALVALIK-----DFDLVIN   74 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-hhccccceeEEecccChHHHHHHHh-----cCCEEEE
Confidence            46899997 999999999988888 69999999999988887 443   2 23455544313333343     3699999


Q ss_pred             CCCchhHHHHH-HhhccCCEEEEEee
Q 026217          128 NVGGKMLDAVL-LNMRIQGRITLCGM  152 (241)
Q Consensus       128 ~~g~~~~~~~~-~~l~~~G~~v~~g~  152 (241)
                      |.+...-..++ .|++.+=.++.+..
T Consensus        75 ~~p~~~~~~i~ka~i~~gv~yvDts~  100 (389)
T COG1748          75 AAPPFVDLTILKACIKTGVDYVDTSY  100 (389)
T ss_pred             eCCchhhHHHHHHHHHhCCCEEEccc
Confidence            99975444555 44455556666544

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.43  E-value=0.0013  Score=51.32  Aligned_cols=79  Identities=11%  Similarity=0.189  Sum_probs=51.9

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHHcCCC-eeecCCCchhHHHHHHHHCC--CCccEEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS-KDKVDLLKNKFGFD-EAFNYKEEPDLDAALKRYFP--EGINIYF  126 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~-~~~~~~~~~~~g~~-~~i~~~~~~~~~~~i~~~~~--~~~d~v~  126 (241)
                      .+.+++|+||+|++|...++.+...|++|+++.++ ++..+.++ ..+.. ...|..+..++...+.....  +++|+++
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li   84 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELR-EKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLV   84 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH-hCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            46789999999999999999998999998887654 33444444 33332 12344443233333333221  3699999


Q ss_pred             eCCC
Q 026217          127 ENVG  130 (241)
Q Consensus       127 d~~g  130 (241)
                      .++|
T Consensus        85 ~~ag   88 (255)
T PRK06463         85 NNAG   88 (255)
T ss_pred             ECCC
Confidence            9886

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=97.42  E-value=0.0035  Score=48.51  Aligned_cols=168  Identities=18%  Similarity=0.167  Sum_probs=97.7

Q ss_pred             cCC--chHHHHHHHHHHHcCCEEEEEeCCHHH----HHHHHHHcCCCe-eecCCCchh---HHHHHHHHCCCCccEEEeC
Q 026217           59 AAS--GAVGQLVGQFAKLVGCYVVGSAGSKDK----VDLLKNKFGFDE-AFNYKEEPD---LDAALKRYFPEGINIYFEN  128 (241)
Q Consensus        59 ga~--g~~G~~avqla~~~g~~v~~~~~~~~~----~~~~~~~~g~~~-~i~~~~~~~---~~~~i~~~~~~~~d~v~d~  128 (241)
                      |++  +++|.+.++.+...|++|+++.+++++    .+.+.++.+... ..|..++.+   +.+.+.+..++++|+++++
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~   80 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNN   80 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEec
Confidence            455  899999999999999999999999887    444553666441 233433312   3333444443679999987


Q ss_pred             CCc--h----------------------------hHHHHHHhhccCCEEEEEeeecccCCCCCCCc-------------c
Q 026217          129 VGG--K----------------------------MLDAVLLNMRIQGRITLCGMISQYNNDKPEGV-------------H  165 (241)
Q Consensus       129 ~g~--~----------------------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-------------~  165 (241)
                      .+.  .                            ..+.+.+.++++|+++.++.............             .
T Consensus        81 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~~~~~~y~~sKaal~~l~r~  160 (241)
T PF13561_consen   81 AGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPMPGYSAYSASKAALEGLTRS  160 (241)
T ss_dssp             EESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBSTTTHHHHHHHHHHHHHHHH
T ss_pred             ccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccCccchhhHHHHHHHHHHHHH
Confidence            752  1                            02345556778899998877543211111000             0


Q ss_pred             ChHHHhh-cceEEEEeecccccchhHHHH---HHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCC
Q 026217          166 NLTCLIS-KRIRMEGFLVPDYFHLYPKFL---EMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGR  229 (241)
Q Consensus       166 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~  229 (241)
                      ....+-. +++++.....+.......+..   +++.+.+.+   ..+..+....+|+.++..+|.+..
T Consensus       161 lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~---~~pl~r~~~~~evA~~v~fL~s~~  225 (241)
T PF13561_consen  161 LAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKK---RIPLGRLGTPEEVANAVLFLASDA  225 (241)
T ss_dssp             HHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHH---HSTTSSHBEHHHHHHHHHHHHSGG
T ss_pred             HHHHhccccCeeeeeecccceeccchhccccccchhhhhhh---hhccCCCcCHHHHHHHHHHHhCcc
Confidence            1233445 688887777665532222222   233333321   122223345778999999888754

...

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=97.42  E-value=0.0012  Score=51.26  Aligned_cols=80  Identities=14%  Similarity=0.199  Sum_probs=53.5

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCC-e--eecCCCchhHHHHHHHHCC--CCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFD-E--AFNYKEEPDLDAALKRYFP--EGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~---~g~~-~--~i~~~~~~~~~~~i~~~~~--~~~  122 (241)
                      ++.++||+||+|++|..+++.+...|++|++++++.++...+.+.   .+.. .  ..|..+...+.+.+.....  +++
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~   81 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV   81 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            467899999999999999999999999999999888766554322   2221 1  2233333123333332221  368


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |+++.+.|
T Consensus        82 d~vi~~ag   89 (250)
T TIGR03206        82 DVLVNNAG   89 (250)
T ss_pred             CEEEECCC
Confidence            99999987

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK09135 pteridine reductase; Provisional

Probab=97.41  E-value=0.0013  Score=50.97  Aligned_cols=80  Identities=9%  Similarity=0.102  Sum_probs=50.7

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHHHc----CCC---eeecCCCchhHHHHHHHHC--CC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK-DKVDLLKNKF----GFD---EAFNYKEEPDLDAALKRYF--PE  120 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~-~~~~~~~~~~----g~~---~~i~~~~~~~~~~~i~~~~--~~  120 (241)
                      .+.+++|+||+|++|..+++.+...|++|++++++. ++.+.+.+.+    +..   ...|..+...+...+....  -+
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   84 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG   84 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            457899999999999999988888999999999753 3333332111    111   1234444323333333221  13


Q ss_pred             CccEEEeCCC
Q 026217          121 GINIYFENVG  130 (241)
Q Consensus       121 ~~d~v~d~~g  130 (241)
                      ++|++|.++|
T Consensus        85 ~~d~vi~~ag   94 (249)
T PRK09135         85 RLDALVNNAS   94 (249)
T ss_pred             CCCEEEECCC
Confidence            6899999987

>PRK07577 short chain dehydrogenase; Provisional

Probab=97.39  E-value=0.00079  Score=51.73  Aligned_cols=75  Identities=23%  Similarity=0.220  Sum_probs=50.3

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENV  129 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~  129 (241)
                      .+.+++|+||+|++|...++.+...|++|+++.+++++ ...    ..-...|..+..++...+.+.... ++|+++.+.
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~-~~~----~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a   76 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID-DFP----GELFACDLADIEQTAATLAQINEIHPVDAIVNNV   76 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc-ccC----ceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECC
Confidence            35689999999999999999999999999999987654 111    111223444432333334333222 689999988


Q ss_pred             C
Q 026217          130 G  130 (241)
Q Consensus       130 g  130 (241)
                      |
T Consensus        77 g   77 (234)
T PRK07577         77 G   77 (234)
T ss_pred             C
Confidence            7

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.39  E-value=0.0049  Score=47.86  Aligned_cols=102  Identities=17%  Similarity=0.193  Sum_probs=61.5

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-HHHH----HHHHHHcCCC-e--eecCCCchhHHHHHHHHCC--CC
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS-KDKV----DLLKNKFGFD-E--AFNYKEEPDLDAALKRYFP--EG  121 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~-~~~~----~~~~~~~g~~-~--~i~~~~~~~~~~~i~~~~~--~~  121 (241)
                      +.+++|+||+|++|...++-+...|++|+.+.++ ++..    ..++ ..+.. .  ..|..+..++...+.+...  ++
T Consensus         6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (252)
T PRK06077          6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVK-ENGGEGIGVLADVSTREGCETLAKATIDRYGV   84 (252)
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHH-HcCCeeEEEEeccCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999998888899998777643 2222    2223 33322 1  2344433123222332211  36


Q ss_pred             ccEEEeCCCc-h----------h---------------HHHHHHhhccCCEEEEEeeec
Q 026217          122 INIYFENVGG-K----------M---------------LDAVLLNMRIQGRITLCGMIS  154 (241)
Q Consensus       122 ~d~v~d~~g~-~----------~---------------~~~~~~~l~~~G~~v~~g~~~  154 (241)
                      +|++|.++|. .          .               .+.+.+.++..|+++.++...
T Consensus        85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~  143 (252)
T PRK06077         85 ADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVA  143 (252)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchh
Confidence            9999999972 0          0               123344455678999887744

>PRK07775 short chain dehydrogenase; Provisional

Probab=97.38  E-value=0.002  Score=50.92  Aligned_cols=80  Identities=15%  Similarity=0.150  Sum_probs=52.3

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCCe---eecCCCchhHHHHHHHHC--CCCcc
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDE---AFNYKEEPDLDAALKRYF--PEGIN  123 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~---~~g~~~---~i~~~~~~~~~~~i~~~~--~~~~d  123 (241)
                      ..+++|+||+|++|...++.+...|++|++++++.++.+.+.+   ..+...   ..|..+..++...+....  -+++|
T Consensus        10 ~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   89 (274)
T PRK07775         10 RRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEIE   89 (274)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            4589999999999999999888899999999987765543331   223221   124444323333333221  13689


Q ss_pred             EEEeCCCc
Q 026217          124 IYFENVGG  131 (241)
Q Consensus       124 ~v~d~~g~  131 (241)
                      ++|.++|.
T Consensus        90 ~vi~~Ag~   97 (274)
T PRK07775         90 VLVSGAGD   97 (274)
T ss_pred             EEEECCCc
Confidence            99998873

>PRK08303 short chain dehydrogenase; Provisional

Probab=97.38  E-value=0.0018  Score=52.20  Aligned_cols=35  Identities=20%  Similarity=0.237  Sum_probs=32.2

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   85 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~   85 (241)
                      .+.+++|+||++++|+++++.+...|++|++++++
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~   41 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRS   41 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecc
Confidence            46799999999999999999999999999999876

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=97.38  E-value=0.0016  Score=50.81  Aligned_cols=79  Identities=20%  Similarity=0.294  Sum_probs=50.6

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH--HHHHHHHHcCCC-e--eecCCCchhHHHHHHHHC--CCCcc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD--KVDLLKNKFGFD-E--AFNYKEEPDLDAALKRYF--PEGIN  123 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~--~~~~~~~~~g~~-~--~i~~~~~~~~~~~i~~~~--~~~~d  123 (241)
                      .+.+++|+|++|++|.++++.+...|++|+.+.++..  ..+.++ ..+.. .  ..|..+..++...+.+..  .+++|
T Consensus         9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D   87 (253)
T PRK08993          9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVT-ALGRRFLSLTADLRKIDGIPALLERAVAEFGHID   87 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHH-hcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            4679999999999999999999999999998875432  223333 33321 1  223333213333333221  13799


Q ss_pred             EEEeCCC
Q 026217          124 IYFENVG  130 (241)
Q Consensus       124 ~v~d~~g  130 (241)
                      ++++++|
T Consensus        88 ~li~~Ag   94 (253)
T PRK08993         88 ILVNNAG   94 (253)
T ss_pred             EEEECCC
Confidence            9999987

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=97.37  E-value=0.0015  Score=50.71  Aligned_cols=82  Identities=11%  Similarity=0.154  Sum_probs=53.3

Q ss_pred             CCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC--ee--ecCC--CchhHHHHHHHHCC
Q 026217           49 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD--EA--FNYK--EEPDLDAALKRYFP  119 (241)
Q Consensus        49 ~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~--~~--i~~~--~~~~~~~~i~~~~~  119 (241)
                      ..++.+++|+|++|++|...++.+...|++|++++++.++.+.+.+++   +..  .+  .|..  +..++.+.+....+
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   88 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE   88 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence            457889999999999999999888888999999999887654443232   221  11  2222  11123222222221


Q ss_pred             --CCccEEEeCCC
Q 026217          120 --EGINIYFENVG  130 (241)
Q Consensus       120 --~~~d~v~d~~g  130 (241)
                        +++|.++.++|
T Consensus        89 ~~~~id~vi~~Ag  101 (247)
T PRK08945         89 QFGRLDGVLHNAG  101 (247)
T ss_pred             HhCCCCEEEECCc
Confidence              36999998876

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.37  E-value=0.0015  Score=51.32  Aligned_cols=80  Identities=14%  Similarity=0.254  Sum_probs=50.9

Q ss_pred             CCcEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHHcCCC--eeecCCCchhHHHHHHHHCC--CC
Q 026217           51 QGEYVFVSAASG--AVGQLVGQFAKLVGCYVVGSAGSKD---KVDLLKNKFGFD--EAFNYKEEPDLDAALKRYFP--EG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g--~~G~~avqla~~~g~~v~~~~~~~~---~~~~~~~~~g~~--~~i~~~~~~~~~~~i~~~~~--~~  121 (241)
                      .+.+++|+||++  ++|.++++.+...|++|+.+.++++   ..+.+..+.+..  ...|-.+..++...+.+...  ++
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   84 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK   84 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence            467899999975  8999999998889999998887632   223332122221  12344443233333333322  37


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|++++++|
T Consensus        85 iD~linnAg   93 (262)
T PRK07984         85 FDGFVHSIG   93 (262)
T ss_pred             CCEEEECCc
Confidence            999999997

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=97.37  E-value=0.0012  Score=51.57  Aligned_cols=79  Identities=13%  Similarity=0.096  Sum_probs=51.6

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----cCCC--e--eecCCCchhHHHHHHHHC--CCC
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK----FGFD--E--AFNYKEEPDLDAALKRYF--PEG  121 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~----~g~~--~--~i~~~~~~~~~~~i~~~~--~~~  121 (241)
                      +.+++|+||+|++|...++.+...|++|+.++++..+.+.+.++    .+..  +  ..|..+..++...+.+..  -++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999888999999999887655444322    2211  1  224333312322222221  136


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|+++++.|
T Consensus        82 id~vv~~ag   90 (259)
T PRK12384         82 VDLLVYNAG   90 (259)
T ss_pred             CCEEEECCC
Confidence            999999887

>PRK05650 short chain dehydrogenase; Provisional

Probab=97.36  E-value=0.0014  Score=51.70  Aligned_cols=77  Identities=16%  Similarity=0.152  Sum_probs=50.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCCe---eecCCCchhHHHHHHHHC--CCCccEE
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDE---AFNYKEEPDLDAALKRYF--PEGINIY  125 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~---~g~~~---~i~~~~~~~~~~~i~~~~--~~~~d~v  125 (241)
                      +++|+||+|++|...++.+...|++|++++++.++.+.+.++   .+.+.   ..|..+..++...+....  .+++|++
T Consensus         2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~l   81 (270)
T PRK05650          2 RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVI   81 (270)
T ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            689999999999999988888999999999887765543322   23221   123333212222222221  1369999


Q ss_pred             EeCCC
Q 026217          126 FENVG  130 (241)
Q Consensus       126 ~d~~g  130 (241)
                      ++++|
T Consensus        82 I~~ag   86 (270)
T PRK05650         82 VNNAG   86 (270)
T ss_pred             EECCC
Confidence            99987

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=97.36  E-value=0.0014  Score=51.02  Aligned_cols=78  Identities=15%  Similarity=0.189  Sum_probs=52.5

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC---eeecCCCchhHHHHHHHHC--CCCccE
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEPDLDAALKRYF--PEGINI  124 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~~i~~~~~~~~~~~i~~~~--~~~~d~  124 (241)
                      .++||+||+|++|...+..+...|.+|+++++++++.+.+.+++   +..   ...|..+..++...+....  .+++|+
T Consensus         2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   81 (255)
T TIGR01963         2 KTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLDI   81 (255)
T ss_pred             CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            47999999999999999988889999999999887766555232   221   1234444323333232221  136899


Q ss_pred             EEeCCC
Q 026217          125 YFENVG  130 (241)
Q Consensus       125 v~d~~g  130 (241)
                      ++.+.+
T Consensus        82 vi~~a~   87 (255)
T TIGR01963        82 LVNNAG   87 (255)
T ss_pred             EEECCC
Confidence            998876

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=97.35  E-value=0.0015  Score=50.91  Aligned_cols=100  Identities=17%  Similarity=0.113  Sum_probs=61.6

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH-cCCCe-eecCCCchhHHHHHHHHCCCCccEEEeC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK-FGFDE-AFNYKEEPDLDAALKRYFPEGINIYFEN  128 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~-~g~~~-~i~~~~~~~~~~~i~~~~~~~~d~v~d~  128 (241)
                      .+.+|+|+||+|.+|..+++.+...|.+|+++.+++++....... .++.. ..|..+.  . ..+.+....++|+||.+
T Consensus        16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~--~-~~l~~~~~~~~d~vi~~   92 (251)
T PLN00141         16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEG--S-DKLVEAIGDDSDAVICA   92 (251)
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCC--H-HHHHHHhhcCCCEEEEC
Confidence            356899999999999999998888899999999887765433211 11211 1243331  1 12222221259999988


Q ss_pred             CCch--------------hHHHHHHhhcc--CCEEEEEeee
Q 026217          129 VGGK--------------MLDAVLLNMRI--QGRITLCGMI  153 (241)
Q Consensus       129 ~g~~--------------~~~~~~~~l~~--~G~~v~~g~~  153 (241)
                      .|..              ....+++.+..  .++++.++..
T Consensus        93 ~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~  133 (251)
T PLN00141         93 TGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI  133 (251)
T ss_pred             CCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence            7731              12344444443  3688887764

>PRK06523 short chain dehydrogenase; Provisional

Probab=97.35  E-value=0.00066  Score=53.13  Aligned_cols=75  Identities=21%  Similarity=0.268  Sum_probs=49.6

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC-eeecCCCchhHHH---HHHHHCCCCccEEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEPDLDA---ALKRYFPEGINIYF  126 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~-~~i~~~~~~~~~~---~i~~~~~~~~d~v~  126 (241)
                      ++.+++|+||+|++|...++.+...|++|+++++++++.  ..  -... ...|..+...+..   .+.+.. +++|+++
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~--~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id~vi   82 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD--LP--EGVEFVAADLTTAEGCAAVARAVLERL-GGVDILV   82 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh--cC--CceeEEecCCCCHHHHHHHHHHHHHHc-CCCCEEE
Confidence            478999999999999999999888999999999875431  11  0111 1234444312222   222222 3699999


Q ss_pred             eCCC
Q 026217          127 ENVG  130 (241)
Q Consensus       127 d~~g  130 (241)
                      +++|
T Consensus        83 ~~ag   86 (260)
T PRK06523         83 HVLG   86 (260)
T ss_pred             ECCc
Confidence            9887

>PRK06940 short chain dehydrogenase; Provisional

Probab=97.34  E-value=0.0057  Score=48.41  Aligned_cols=77  Identities=18%  Similarity=0.258  Sum_probs=50.1

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC---eeecCCCchhHHHHHHHHC-CCCccE
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEPDLDAALKRYF-PEGINI  124 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~~i~~~~~~~~~~~i~~~~-~~~~d~  124 (241)
                      +.+++|+|| |++|..+++.+. .|++|+++++++++.+.+.+++   +..   ...|..+..++...+.... -+++|+
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~   79 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTG   79 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCE
Confidence            357899997 799999888875 7999999999877665443233   321   1234444323333333321 147999


Q ss_pred             EEeCCC
Q 026217          125 YFENVG  130 (241)
Q Consensus       125 v~d~~g  130 (241)
                      +++++|
T Consensus        80 li~nAG   85 (275)
T PRK06940         80 LVHTAG   85 (275)
T ss_pred             EEECCC
Confidence            999998

>PRK08278 short chain dehydrogenase; Provisional

Probab=97.34  E-value=0.0017  Score=51.29  Aligned_cols=79  Identities=22%  Similarity=0.319  Sum_probs=51.0

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH-------HH----HHHHHcCCC---eeecCCCchhHHHHHHH
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK-------VD----LLKNKFGFD---EAFNYKEEPDLDAALKR  116 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~-------~~----~~~~~~g~~---~~i~~~~~~~~~~~i~~  116 (241)
                      .+.+++|+||+|++|...++.+...|++|++++++.+.       .+    .++ ..+..   ...|..+...+.+.+.+
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~D~~~~~~i~~~~~~   83 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIE-AAGGQALPLVGDVRDEDQVAAAVAK   83 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHH-hcCCceEEEEecCCCHHHHHHHHHH
Confidence            45689999999999999999888899999999986532       11    122 23332   12344443233333332


Q ss_pred             HCC--CCccEEEeCCC
Q 026217          117 YFP--EGINIYFENVG  130 (241)
Q Consensus       117 ~~~--~~~d~v~d~~g  130 (241)
                      ...  +++|++|+++|
T Consensus        84 ~~~~~g~id~li~~ag   99 (273)
T PRK08278         84 AVERFGGIDICVNNAS   99 (273)
T ss_pred             HHHHhCCCCEEEECCC
Confidence            211  36999999887

>TIGR00406 prmA ribosomal protein L11 methyltransferase

Probab=97.33  E-value=0.0031  Score=50.30  Aligned_cols=96  Identities=17%  Similarity=0.170  Sum_probs=62.7

Q ss_pred             CCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcC---CCeeecCCCchhHHHHHHHHCCCCccE
Q 026217           49 PKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFG---FDEAFNYKEEPDLDAALKRYFPEGINI  124 (241)
Q Consensus        49 ~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~g---~~~~i~~~~~~~~~~~i~~~~~~~~d~  124 (241)
                      ..++++||-.| +|+ |..++.+++ .|+ +|++++.++...+.+++...   ....+..... +    ......++||+
T Consensus       157 ~~~g~~VLDvG-cGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~-~----~~~~~~~~fDl  228 (288)
T TIGR00406       157 DLKDKNVIDVG-CGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI-Y----LEQPIEGKADV  228 (288)
T ss_pred             cCCCCEEEEeC-CCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec-c----cccccCCCceE
Confidence            46889999999 355 887777665 565 99999999988888773332   2111110011 1    11122347999


Q ss_pred             EEeCCCc----hhHHHHHHhhccCCEEEEEee
Q 026217          125 YFENVGG----KMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       125 v~d~~g~----~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      |+.....    ..+..+.+.|+++|.++..|.
T Consensus       229 Vvan~~~~~l~~ll~~~~~~LkpgG~li~sgi  260 (288)
T TIGR00406       229 IVANILAEVIKELYPQFSRLVKPGGWLILSGI  260 (288)
T ss_pred             EEEecCHHHHHHHHHHHHHHcCCCcEEEEEeC
Confidence            9876543    345677889999999988765

Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.

>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.33  E-value=0.0048  Score=46.89  Aligned_cols=98  Identities=15%  Similarity=0.159  Sum_probs=66.9

Q ss_pred             HhcCCCCCcEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHc---CCCe--eecCCCchhHHHHHHHH
Q 026217           45 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKNKF---GFDE--AFNYKEEPDLDAALKRY  117 (241)
Q Consensus        45 ~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g--~~v~~~~~~~~~~~~~~~~~---g~~~--~i~~~~~~~~~~~i~~~  117 (241)
                      +...++++++||-.|  .|.|..+..+++..+  .+|+++..+++-.+.+++.+   |...  ++..    +.....  .
T Consensus        70 ~~l~~~~g~~VLdIG--~GsG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~g----d~~~~~--~  141 (212)
T PRK13942         70 ELLDLKEGMKVLEIG--TGSGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVG----DGTLGY--E  141 (212)
T ss_pred             HHcCCCCcCEEEEEC--CcccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEEC----CcccCC--C
Confidence            556789999999999  677888888888775  59999999988877776433   3321  2211    111000  1


Q ss_pred             CCCCccEEEeCCC-chhHHHHHHhhccCCEEEEE
Q 026217          118 FPEGINIYFENVG-GKMLDAVLLNMRIQGRITLC  150 (241)
Q Consensus       118 ~~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~  150 (241)
                      ..+.+|.|+-... ........+.|+++|+++..
T Consensus       142 ~~~~fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~  175 (212)
T PRK13942        142 ENAPYDRIYVTAAGPDIPKPLIEQLKDGGIMVIP  175 (212)
T ss_pred             cCCCcCEEEECCCcccchHHHHHhhCCCcEEEEE
Confidence            1237999875444 45567788899999998875

>PRK07102 short chain dehydrogenase; Provisional

Probab=97.32  E-value=0.0018  Score=50.11  Aligned_cols=77  Identities=12%  Similarity=0.169  Sum_probs=50.8

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----CCC-e--eecCCCchhHHHHHHHHCCCCccEE
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF----GFD-E--AFNYKEEPDLDAALKRYFPEGINIY  125 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~----g~~-~--~i~~~~~~~~~~~i~~~~~~~~d~v  125 (241)
                      .+++|+||+|++|...++.+...|++|+++++++++.+.+.+.+    +.. +  ..|..+..++.+.+.+.. ..+|++
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~-~~~d~v   80 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLP-ALPDIV   80 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHh-hcCCEE
Confidence            47999999999999999999999999999999887665443222    111 1  123333313333333221 257999


Q ss_pred             EeCCC
Q 026217          126 FENVG  130 (241)
Q Consensus       126 ~d~~g  130 (241)
                      +.++|
T Consensus        81 v~~ag   85 (243)
T PRK07102         81 LIAVG   85 (243)
T ss_pred             EECCc
Confidence            98776

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.32  E-value=0.0015  Score=50.73  Aligned_cols=80  Identities=13%  Similarity=0.191  Sum_probs=50.4

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHH---HcCCC-e--eecCCCchhHHHHHHHHC--CCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGS-AGSKDKVDLLKN---KFGFD-E--AFNYKEEPDLDAALKRYF--PEG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~-~~~~~~~~~~~~---~~g~~-~--~i~~~~~~~~~~~i~~~~--~~~  121 (241)
                      ++.+++|+||+|++|+.++..+...|++|++. .++.++.+.+.+   ..+.. .  ..|..+..++...+.+..  -++
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR   82 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46789999999999999999999999987764 556555433321   23332 1  234444313333232221  136


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|+++++.|
T Consensus        83 id~vi~~ag   91 (250)
T PRK08063         83 LDVFVNNAA   91 (250)
T ss_pred             CCEEEECCC
Confidence            999999887

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.32  E-value=0.0015  Score=51.25  Aligned_cols=80  Identities=15%  Similarity=0.287  Sum_probs=51.4

Q ss_pred             CCcEEEEEcC--CchHHHHHHHHHHHcCCEEEEEeCC---HHHHHHHHHHcCCCe--eecCCCchhHHHHHHHHCC--CC
Q 026217           51 QGEYVFVSAA--SGAVGQLVGQFAKLVGCYVVGSAGS---KDKVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFP--EG  121 (241)
Q Consensus        51 ~~~~vlI~ga--~g~~G~~avqla~~~g~~v~~~~~~---~~~~~~~~~~~g~~~--~i~~~~~~~~~~~i~~~~~--~~  121 (241)
                      .+.+++|+||  ++++|++.++.+...|++|+.+.+.   +++.+.+.++++...  ..|..++.++...+.....  ++
T Consensus         5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   84 (260)
T PRK06997          5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDG   84 (260)
T ss_pred             CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCC
Confidence            4678999996  5799999999988899999887543   334444432444321  2344443233333333322  47


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|++++++|
T Consensus        85 iD~lvnnAG   93 (260)
T PRK06997         85 LDGLVHSIG   93 (260)
T ss_pred             CcEEEEccc
Confidence            999999886

>PRK08264 short chain dehydrogenase; Validated

Probab=97.32  E-value=0.0012  Score=50.82  Aligned_cols=75  Identities=20%  Similarity=0.271  Sum_probs=51.3

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCC-e--eecCCCchhHHHHHHHHCCCCccEEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFD-E--AFNYKEEPDLDAALKRYFPEGINIYF  126 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~g~~-~--~i~~~~~~~~~~~i~~~~~~~~d~v~  126 (241)
                      .+.+++|+||+|++|..+++.+...|+ +|+++++++++.+.    .+.. .  ..|..+..++.+.+...  +.+|+++
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~vi   78 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD----LGPRVVPLQLDVTDPASVAAAAEAA--SDVTILV   78 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh----cCCceEEEEecCCCHHHHHHHHHhc--CCCCEEE
Confidence            457899999999999999999999999 99999988766542    2221 1  23444431333222221  2589999


Q ss_pred             eCCCc
Q 026217          127 ENVGG  131 (241)
Q Consensus       127 d~~g~  131 (241)
                      .+.|.
T Consensus        79 ~~ag~   83 (238)
T PRK08264         79 NNAGI   83 (238)
T ss_pred             ECCCc
Confidence            98875

>PRK05599 hypothetical protein; Provisional

Probab=97.32  E-value=0.0014  Score=51.03  Aligned_cols=75  Identities=12%  Similarity=0.155  Sum_probs=49.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC--e--eecCCCchhHH---HHHHHHCCCCcc
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD--E--AFNYKEEPDLD---AALKRYFPEGIN  123 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~--~--~i~~~~~~~~~---~~i~~~~~~~~d  123 (241)
                      +++|+||++++|.+.++.+. .|.+|+.+++++++.+.+.+++   |.+  .  ..|..+..++.   +++.+.. +++|
T Consensus         2 ~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~id   79 (246)
T PRK05599          2 SILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELA-GEIS   79 (246)
T ss_pred             eEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhc-CCCC
Confidence            58999999999998777665 4999999999888776554333   322  1  23444431222   3333322 4799


Q ss_pred             EEEeCCC
Q 026217          124 IYFENVG  130 (241)
Q Consensus       124 ~v~d~~g  130 (241)
                      +++++.|
T Consensus        80 ~lv~nag   86 (246)
T PRK05599         80 LAVVAFG   86 (246)
T ss_pred             EEEEecC
Confidence            9999887

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=97.31  E-value=0.0014  Score=58.61  Aligned_cols=80  Identities=19%  Similarity=0.288  Sum_probs=54.9

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----CCC----eeecCCCchhHHHHHHHHC--CC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF----GFD----EAFNYKEEPDLDAALKRYF--PE  120 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~----g~~----~~i~~~~~~~~~~~i~~~~--~~  120 (241)
                      .+.+++|+||+|++|.++++.+...|++|++++++.++.+.+.+++    +..    ...|..+..++...+.+..  -+
T Consensus       413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g  492 (676)
T TIGR02632       413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYG  492 (676)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            3678999999999999999988889999999999887665544232    221    1234444323333333322  13


Q ss_pred             CccEEEeCCC
Q 026217          121 GINIYFENVG  130 (241)
Q Consensus       121 ~~d~v~d~~g  130 (241)
                      ++|++++++|
T Consensus       493 ~iDilV~nAG  502 (676)
T TIGR02632       493 GVDIVVNNAG  502 (676)
T ss_pred             CCcEEEECCC
Confidence            7999999998

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.30  E-value=0.0024  Score=50.00  Aligned_cols=80  Identities=10%  Similarity=0.102  Sum_probs=52.3

Q ss_pred             CCcEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCC---HHHHHHHHHHcC-CC---eeecCCCchhHHHHHHHHCC--
Q 026217           51 QGEYVFVSAAS--GAVGQLVGQFAKLVGCYVVGSAGS---KDKVDLLKNKFG-FD---EAFNYKEEPDLDAALKRYFP--  119 (241)
Q Consensus        51 ~~~~vlI~ga~--g~~G~~avqla~~~g~~v~~~~~~---~~~~~~~~~~~g-~~---~~i~~~~~~~~~~~i~~~~~--  119 (241)
                      .+.+++|+||+  +++|.++++.+...|++|+.++++   +++.+.+.+++. ..   ...|..+..++...+.+...  
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   85 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV   85 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence            46789999986  799999999988899999988754   344555543442 11   12344443233333333322  


Q ss_pred             CCccEEEeCCC
Q 026217          120 EGINIYFENVG  130 (241)
Q Consensus       120 ~~~d~v~d~~g  130 (241)
                      +++|++++++|
T Consensus        86 g~ld~lv~nag   96 (257)
T PRK08594         86 GVIHGVAHCIA   96 (257)
T ss_pred             CCccEEEECcc
Confidence            47999999876

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=97.30  E-value=0.0025  Score=49.29  Aligned_cols=81  Identities=21%  Similarity=0.300  Sum_probs=50.3

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHHH---cCCC-ee--ecCCCchhHHHHHHHHCC--CC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK-VDLLKNK---FGFD-EA--FNYKEEPDLDAALKRYFP--EG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~-~~~~~~~---~g~~-~~--i~~~~~~~~~~~i~~~~~--~~  121 (241)
                      .+.+++|+||+|++|...+..+...|++|+++.+++.+ .+...+.   .+.. ..  .|..+..++...+.....  ++
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG   83 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            34689999999999999999999999999777765542 2222212   2222 12  244443233333333221  26


Q ss_pred             ccEEEeCCCc
Q 026217          122 INIYFENVGG  131 (241)
Q Consensus       122 ~d~v~d~~g~  131 (241)
                      +|.++.++|.
T Consensus        84 id~vi~~ag~   93 (248)
T PRK05557         84 VDILVNNAGI   93 (248)
T ss_pred             CCEEEECCCc
Confidence            8999998873

>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2

Probab=97.28  E-value=0.0014  Score=49.47  Aligned_cols=99  Identities=17%  Similarity=0.218  Sum_probs=64.2

Q ss_pred             HhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHH---HcCCCee-ecCCCchhHHHHHHHHC
Q 026217           45 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDKVDLLKN---KFGFDEA-FNYKEEPDLDAALKRYF  118 (241)
Q Consensus        45 ~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~--~v~~~~~~~~~~~~~~~---~~g~~~~-i~~~~~~~~~~~i~~~~  118 (241)
                      +...++||++||-.|  +|.|..+.-+++..|.  +|+.+.+.+.-.+.+++   .++.+.+ +...+.   ..-..  .
T Consensus        66 ~~L~l~pg~~VLeIG--tGsGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg---~~g~~--~  138 (209)
T PF01135_consen   66 EALDLKPGDRVLEIG--TGSGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDG---SEGWP--E  138 (209)
T ss_dssp             HHTTC-TT-EEEEES---TTSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-G---GGTTG--G
T ss_pred             HHHhcCCCCEEEEec--CCCcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcch---hhccc--c
Confidence            567899999999999  7789989989988875  69999988775555543   3454322 212221   10111  1


Q ss_pred             CCCccEEEeCCCc-hhHHHHHHhhccCCEEEEE
Q 026217          119 PEGINIYFENVGG-KMLDAVLLNMRIQGRITLC  150 (241)
Q Consensus       119 ~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~  150 (241)
                      .++||.++-+.+- ..-...++.|++||+++..
T Consensus       139 ~apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~p  171 (209)
T PF01135_consen  139 EAPFDRIIVTAAVPEIPEALLEQLKPGGRLVAP  171 (209)
T ss_dssp             G-SEEEEEESSBBSS--HHHHHTEEEEEEEEEE
T ss_pred             CCCcCEEEEeeccchHHHHHHHhcCCCcEEEEE
Confidence            1379999887774 4557888999999999974

1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.27  E-value=0.0019  Score=49.95  Aligned_cols=80  Identities=23%  Similarity=0.332  Sum_probs=51.3

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHHc---CCC-e--eecCCCchhHHHHHHHHCC--CCc
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGS-AGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYFP--EGI  122 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~-~~~~~~~~~~~~~~---g~~-~--~i~~~~~~~~~~~i~~~~~--~~~  122 (241)
                      +.+++|+||+|++|...+..+...|++|+++ .+++++.+.+.+.+   +.. .  ..|..+..++...+.....  +++
T Consensus         5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (247)
T PRK05565          5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKI   84 (247)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            4689999999999999988888889999998 87776655443222   211 1  2244443123222222211  369


Q ss_pred             cEEEeCCCc
Q 026217          123 NIYFENVGG  131 (241)
Q Consensus       123 d~v~d~~g~  131 (241)
                      |++|.+.|.
T Consensus        85 d~vi~~ag~   93 (247)
T PRK05565         85 DILVNNAGI   93 (247)
T ss_pred             CEEEECCCc
Confidence            999998873

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=97.27  E-value=0.002  Score=49.75  Aligned_cols=77  Identities=19%  Similarity=0.283  Sum_probs=48.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHc---CCC---eeecCCCchhHHHHHHHHC--CCCccE
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKDKVDLLKNKF---GFD---EAFNYKEEPDLDAALKRYF--PEGINI  124 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~-~~~~~~~~~~~~---g~~---~~i~~~~~~~~~~~i~~~~--~~~~d~  124 (241)
                      +++|+||+|++|...++.+...|++|+++.+ ++++.+...++.   +..   ...|..+...+...+.+..  -+.+|.
T Consensus         2 ~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (242)
T TIGR01829         2 IALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPIDV   81 (242)
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Confidence            6899999999999999999999999999887 444333222122   211   1224444312333332221  136999


Q ss_pred             EEeCCC
Q 026217          125 YFENVG  130 (241)
Q Consensus       125 v~d~~g  130 (241)
                      +|.+.|
T Consensus        82 vi~~ag   87 (242)
T TIGR01829        82 LVNNAG   87 (242)
T ss_pred             EEECCC
Confidence            999987

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK05855 short chain dehydrogenase; Validated

Probab=97.27  E-value=0.0015  Score=57.14  Aligned_cols=81  Identities=17%  Similarity=0.123  Sum_probs=54.9

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCC---eeecCCCchhHHHHHHHHC--CCCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFD---EAFNYKEEPDLDAALKRYF--PEGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~---~g~~---~~i~~~~~~~~~~~i~~~~--~~~~  122 (241)
                      .+.+++|+||+|++|...++.+...|++|++++++.++.+.+.+.   .|..   ...|..+...+.+.+.+..  .+++
T Consensus       314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i  393 (582)
T PRK05855        314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVP  393 (582)
T ss_pred             CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            457899999999999999998889999999999988776554322   2321   1234444312333333221  1369


Q ss_pred             cEEEeCCCc
Q 026217          123 NIYFENVGG  131 (241)
Q Consensus       123 d~v~d~~g~  131 (241)
                      |++++++|.
T Consensus       394 d~lv~~Ag~  402 (582)
T PRK05855        394 DIVVNNAGI  402 (582)
T ss_pred             cEEEECCcc
Confidence            999999973

>PRK07069 short chain dehydrogenase; Validated

Probab=97.25  E-value=0.002  Score=50.06  Aligned_cols=76  Identities=17%  Similarity=0.286  Sum_probs=50.0

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHHcC----CC----eeecCCCchhHHHHHHHHCC--CCcc
Q 026217           55 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGS-KDKVDLLKNKFG----FD----EAFNYKEEPDLDAALKRYFP--EGIN  123 (241)
Q Consensus        55 vlI~ga~g~~G~~avqla~~~g~~v~~~~~~-~~~~~~~~~~~g----~~----~~i~~~~~~~~~~~i~~~~~--~~~d  123 (241)
                      ++|+||+|++|...++.+...|++|++++++ .++.+.+.+++.    ..    ...|..+...+...+.....  +++|
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   81 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS   81 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence            7999999999999999988899999999987 555544442332    11    12244443233333332221  3699


Q ss_pred             EEEeCCC
Q 026217          124 IYFENVG  130 (241)
Q Consensus       124 ~v~d~~g  130 (241)
                      +++.++|
T Consensus        82 ~vi~~ag   88 (251)
T PRK07069         82 VLVNNAG   88 (251)
T ss_pred             EEEECCC
Confidence            9999987

>PRK09134 short chain dehydrogenase; Provisional

Probab=97.25  E-value=0.0035  Score=49.03  Aligned_cols=80  Identities=16%  Similarity=0.193  Sum_probs=50.2

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHHc---CCC---eeecCCCchhHHHHHHHHC--CCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS-KDKVDLLKNKF---GFD---EAFNYKEEPDLDAALKRYF--PEG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~-~~~~~~~~~~~---g~~---~~i~~~~~~~~~~~i~~~~--~~~  121 (241)
                      .+.+++|+||+|++|..+++.+...|++|++++++ .++.+.+.+++   +..   ...|..+...+...+.+..  -++
T Consensus         8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~   87 (258)
T PRK09134          8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGP   87 (258)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            35689999999999999999888899998887654 34433332122   322   1234444313333332221  136


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|+++.++|
T Consensus        88 iD~vi~~ag   96 (258)
T PRK09134         88 ITLLVNNAS   96 (258)
T ss_pred             CCEEEECCc
Confidence            999999987

>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]

Probab=97.25  E-value=0.0044  Score=47.64  Aligned_cols=102  Identities=20%  Similarity=0.214  Sum_probs=72.1

Q ss_pred             cCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCCee--ecCCCchhHHHHHHHHCCCCcc
Q 026217           47 CSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEA--FNYKEEPDLDAALKRYFPEGIN  123 (241)
Q Consensus        47 ~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~--i~~~~~~~~~~~i~~~~~~~~d  123 (241)
                      .+..+|++||=.|  +|+|-.+..+++..|- +|++++.|+.-++.++++..-...  +.+-.  .-.+.+. ..+..||
T Consensus        47 ~~~~~g~~vLDva--~GTGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~--~dAe~LP-f~D~sFD  121 (238)
T COG2226          47 LGIKPGDKVLDVA--CGTGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQNVEFVV--GDAENLP-FPDNSFD  121 (238)
T ss_pred             hCCCCCCEEEEec--CCccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccceEEEE--echhhCC-CCCCccC
Confidence            4566899999887  8899999999999975 999999999988888755432100  11111  1111221 2233799


Q ss_pred             EEEeCCCc-------hhHHHHHHhhccCCEEEEEeee
Q 026217          124 IYFENVGG-------KMLDAVLLNMRIQGRITLCGMI  153 (241)
Q Consensus       124 ~v~d~~g~-------~~~~~~~~~l~~~G~~v~~g~~  153 (241)
                      +|.-+.|-       ..++.+.+.|+|+|+++++...
T Consensus       122 ~vt~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~  158 (238)
T COG2226         122 AVTISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEFS  158 (238)
T ss_pred             EEEeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcC
Confidence            99877761       3688999999999999998763

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.25  E-value=0.0034  Score=49.83  Aligned_cols=93  Identities=14%  Similarity=0.130  Sum_probs=60.2

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeC
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFEN  128 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g-~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~  128 (241)
                      ..+.+++|+|+ |++|.+++..+...| .+|+++.|+.++.+.+.++++....+.. .. +..+.+     ..+|+|++|
T Consensus       121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~-~~~~~~-----~~~DivIna  192 (278)
T PRK00258        121 LKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-DL-ELQEEL-----ADFDLIINA  192 (278)
T ss_pred             CCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-cc-cchhcc-----ccCCEEEEC
Confidence            35678999996 999999999999999 4999999998887777645542110111 00 111111     259999999


Q ss_pred             CCchhH------HHHHHhhccCCEEEEE
Q 026217          129 VGGKML------DAVLLNMRIQGRITLC  150 (241)
Q Consensus       129 ~g~~~~------~~~~~~l~~~G~~v~~  150 (241)
                      +.....      ....+.+.++..++.+
T Consensus       193 Tp~g~~~~~~~~~~~~~~l~~~~~v~Di  220 (278)
T PRK00258        193 TSAGMSGELPLPPLPLSLLRPGTIVYDM  220 (278)
T ss_pred             CcCCCCCCCCCCCCCHHHcCCCCEEEEe
Confidence            974321      1223456666666655

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=97.24  E-value=0.0028  Score=49.11  Aligned_cols=81  Identities=23%  Similarity=0.325  Sum_probs=49.4

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHH-HHHHHH--HcCCCe---eecCCCchhHHHHHHHHC--CCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKDK-VDLLKN--KFGFDE---AFNYKEEPDLDAALKRYF--PEG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~-~~~~-~~~~~~--~~g~~~---~i~~~~~~~~~~~i~~~~--~~~  121 (241)
                      ++.+++|+|++|++|...++.+...|++|++..+ ++.+ .+.+.+  ..+...   ..|..+..++...+.+..  -++
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE   81 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            3578999999999999999999999998887553 2222 222220  234321   134444312333222221  137


Q ss_pred             ccEEEeCCCc
Q 026217          122 INIYFENVGG  131 (241)
Q Consensus       122 ~d~v~d~~g~  131 (241)
                      +|++++++|.
T Consensus        82 id~li~~ag~   91 (246)
T PRK12938         82 IDVLVNNAGI   91 (246)
T ss_pred             CCEEEECCCC
Confidence            9999999973

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.24  E-value=0.0032  Score=48.95  Aligned_cols=79  Identities=19%  Similarity=0.224  Sum_probs=50.4

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHcCCC-e--eecCCCchhHHHHHHH---HCCCCccE
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKDKVDLLKNKFGFD-E--AFNYKEEPDLDAALKR---YFPEGINI  124 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~-~~~~~~~~~~~~g~~-~--~i~~~~~~~~~~~i~~---~~~~~~d~  124 (241)
                      +.+++|+||+|++|...+..+...|++|+.+.+ ++++.+.+.++++.. .  ..|..+..++...+.+   ..+.++|+
T Consensus         5 ~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id~   84 (253)
T PRK08642          5 EQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPITT   84 (253)
T ss_pred             CCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCeE
Confidence            468999999999999999998889999887654 455554444344422 1  1244443133333322   22224999


Q ss_pred             EEeCCC
Q 026217          125 YFENVG  130 (241)
Q Consensus       125 v~d~~g  130 (241)
                      ++.+.|
T Consensus        85 li~~ag   90 (253)
T PRK08642         85 VVNNAL   90 (253)
T ss_pred             EEECCC
Confidence            999875

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=97.24  E-value=0.014  Score=38.11  Aligned_cols=86  Identities=16%  Similarity=0.176  Sum_probs=58.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC---CEEEEE-eCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCC
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVG---CYVVGS-AGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV  129 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g---~~v~~~-~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~  129 (241)
                      +|.|.| +|.+|.+.+.-....|   .+|+.+ .+++++.+.+.++++......     +..+.+.+     .|+||-|+
T Consensus         1 kI~iIG-~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-----advvilav   69 (96)
T PF03807_consen    1 KIGIIG-AGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATAD-----DNEEAAQE-----ADVVILAV   69 (96)
T ss_dssp             EEEEES-TSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESE-----EHHHHHHH-----TSEEEE-S
T ss_pred             CEEEEC-CCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccC-----ChHHhhcc-----CCEEEEEE
Confidence            477888 4999999999999998   788855 999999888876787542221     23334443     89999999


Q ss_pred             CchhHHHHHHhh---ccCCEEEEE
Q 026217          130 GGKMLDAVLLNM---RIQGRITLC  150 (241)
Q Consensus       130 g~~~~~~~~~~l---~~~G~~v~~  150 (241)
                      -...+...++.+   .++..++.+
T Consensus        70 ~p~~~~~v~~~i~~~~~~~~vis~   93 (96)
T PF03807_consen   70 KPQQLPEVLSEIPHLLKGKLVISI   93 (96)
T ss_dssp             -GGGHHHHHHHHHHHHTTSEEEEE
T ss_pred             CHHHHHHHHHHHhhccCCCEEEEe
Confidence            977666665554   334455443

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=97.23  E-value=0.002  Score=50.47  Aligned_cols=104  Identities=12%  Similarity=0.095  Sum_probs=63.4

Q ss_pred             CCcEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCC------HHHHHHHHHHcCCC--eeecCCCchhHHHHHHHHCC-
Q 026217           51 QGEYVFVSAAS--GAVGQLVGQFAKLVGCYVVGSAGS------KDKVDLLKNKFGFD--EAFNYKEEPDLDAALKRYFP-  119 (241)
Q Consensus        51 ~~~~vlI~ga~--g~~G~~avqla~~~g~~v~~~~~~------~~~~~~~~~~~g~~--~~i~~~~~~~~~~~i~~~~~-  119 (241)
                      .+.+++|+||+  +++|.++++.+...|++|+.+.++      ++..+.+.++.+..  ...|..+..++...+.+... 
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~   84 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK   84 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence            46789999985  799999999998999999887543      22333343122211  12344443233333333221 


Q ss_pred             -CCccEEEeCCCch-------h-----------------------HHHHHHhhccCCEEEEEeeec
Q 026217          120 -EGINIYFENVGGK-------M-----------------------LDAVLLNMRIQGRITLCGMIS  154 (241)
Q Consensus       120 -~~~d~v~d~~g~~-------~-----------------------~~~~~~~l~~~G~~v~~g~~~  154 (241)
                       +++|++++++|..       .                       .+..+..++.+|+++.++...
T Consensus        85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~  150 (258)
T PRK07370         85 WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLG  150 (258)
T ss_pred             cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccc
Confidence             3799999998721       1                       133455566679999887644

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=97.23  E-value=0.00075  Score=53.03  Aligned_cols=76  Identities=14%  Similarity=0.180  Sum_probs=50.6

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC-eeecCCCchhHHHHHHHHC--CCCccEEEe
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEPDLDAALKRYF--PEGINIYFE  127 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~-~~i~~~~~~~~~~~i~~~~--~~~~d~v~d  127 (241)
                      .+.+++|+||+|++|.+.++.+...|++|+.+++++++.+.    .... ...|..+..++...+....  -+++|++++
T Consensus         8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~   83 (266)
T PRK06171          8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQH----ENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVN   83 (266)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccccc----CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            46789999999999999999999999999999877654321    1111 1234444323333333321  136999999


Q ss_pred             CCC
Q 026217          128 NVG  130 (241)
Q Consensus       128 ~~g  130 (241)
                      ++|
T Consensus        84 ~Ag   86 (266)
T PRK06171         84 NAG   86 (266)
T ss_pred             CCc
Confidence            887

>PLN00015 protochlorophyllide reductase

Probab=97.23  E-value=0.0023  Score=51.52  Aligned_cols=75  Identities=13%  Similarity=0.168  Sum_probs=50.9

Q ss_pred             EEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHcCC--Ce----eecCCCchhHHHHHHHHC--CCCccEEE
Q 026217           56 FVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKDKVDLLKNKFGF--DE----AFNYKEEPDLDAALKRYF--PEGINIYF  126 (241)
Q Consensus        56 lI~ga~g~~G~~avqla~~~g-~~v~~~~~~~~~~~~~~~~~g~--~~----~i~~~~~~~~~~~i~~~~--~~~~d~v~  126 (241)
                      +|+||++++|.++++.+...| ++|+++++++++.+.+.++++.  ..    ..|..+..++...+....  .+++|+++
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI   80 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV   80 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            589999999999888888889 8999999988776655535432  11    234444313333333322  23799999


Q ss_pred             eCCC
Q 026217          127 ENVG  130 (241)
Q Consensus       127 d~~g  130 (241)
                      +++|
T Consensus        81 nnAG   84 (308)
T PLN00015         81 CNAA   84 (308)
T ss_pred             ECCC
Confidence            9887

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=97.23  E-value=0.0027  Score=49.71  Aligned_cols=80  Identities=16%  Similarity=0.189  Sum_probs=50.9

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHH---HcCCC---eeecCCCchhHHHHHHHHCC--CC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK-DKVDLLKN---KFGFD---EAFNYKEEPDLDAALKRYFP--EG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~-~~~~~~~~---~~g~~---~~i~~~~~~~~~~~i~~~~~--~~  121 (241)
                      ++.+++|+||+|++|...++.+...|++|+++.++. +..+.+.+   ..+..   ...|..+...+...+.....  ++
T Consensus         6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~   85 (261)
T PRK08936          6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGT   85 (261)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            567999999999999999999999999988887743 33332221   22322   12344443233332332211  36


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|++++++|
T Consensus        86 id~lv~~ag   94 (261)
T PRK08936         86 LDVMINNAG   94 (261)
T ss_pred             CCEEEECCC
Confidence            999999887

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=97.22  E-value=0.003  Score=49.93  Aligned_cols=73  Identities=19%  Similarity=0.221  Sum_probs=47.9

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcC----CCe--------eecCCCchhHHHHHHHHCCC-
Q 026217           55 VFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFG----FDE--------AFNYKEEPDLDAALKRYFPE-  120 (241)
Q Consensus        55 vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~g----~~~--------~i~~~~~~~~~~~i~~~~~~-  120 (241)
                      |||+||+|++|...++-+...+. +++.+++++.++-.+++++.    ...        +-|.++    .+.+...... 
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd----~~~l~~~~~~~   76 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRD----KERLNRIFEEY   76 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCH----HHHHHHHTT--
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccC----HHHHHHHHhhc
Confidence            79999999999998888888886 89999999988877776762    111        113333    3455555444 


Q ss_pred             CccEEEeCCCc
Q 026217          121 GINIYFENVGG  131 (241)
Q Consensus       121 ~~d~v~d~~g~  131 (241)
                      ++|+||.++.-
T Consensus        77 ~pdiVfHaAA~   87 (293)
T PF02719_consen   77 KPDIVFHAAAL   87 (293)
T ss_dssp             T-SEEEE----
T ss_pred             CCCEEEEChhc
Confidence            89999998863

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PRK12746 short chain dehydrogenase; Provisional

Probab=97.22  E-value=0.0043  Score=48.30  Aligned_cols=80  Identities=18%  Similarity=0.211  Sum_probs=50.9

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHHc---CCC---eeecCCCchhHHHHHHHH---C---
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGS-AGSKDKVDLLKNKF---GFD---EAFNYKEEPDLDAALKRY---F---  118 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~-~~~~~~~~~~~~~~---g~~---~~i~~~~~~~~~~~i~~~---~---  118 (241)
                      +.+++|+||+|++|..+++.+...|++|++. .++.++.+...+.+   +..   ...|..+..++...+.+.   .   
T Consensus         6 ~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~~   85 (254)
T PRK12746          6 GKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQIR   85 (254)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhccc
Confidence            5689999999999999999988899988774 56665544333232   221   123444432333333332   1   


Q ss_pred             -C-CCccEEEeCCCc
Q 026217          119 -P-EGINIYFENVGG  131 (241)
Q Consensus       119 -~-~~~d~v~d~~g~  131 (241)
                       + +++|+++.+.|.
T Consensus        86 ~~~~~id~vi~~ag~  100 (254)
T PRK12746         86 VGTSEIDILVNNAGI  100 (254)
T ss_pred             cCCCCccEEEECCCC
Confidence             1 369999998873

>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]

Probab=97.22  E-value=0.0071  Score=44.30  Aligned_cols=97  Identities=20%  Similarity=0.343  Sum_probs=67.0

Q ss_pred             cCCCCCcEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HcCCCe--eecCCCchhHHHHHHHHCCC
Q 026217           47 CSPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKN---KFGFDE--AFNYKEEPDLDAALKRYFPE  120 (241)
Q Consensus        47 ~~~~~~~~vlI~ga~g~~G~~avqla~~~-g~~v~~~~~~~~~~~~~~~---~~g~~~--~i~~~~~~~~~~~i~~~~~~  120 (241)
                      ..++||+.++=.|+  ++|..++++++.. ..+||++.++++..+..++   .||.+.  ++.-.    -.+.+.+..  
T Consensus        30 L~~~~g~~l~DIGa--GtGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~----Ap~~L~~~~--  101 (187)
T COG2242          30 LRPRPGDRLWDIGA--GTGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGD----APEALPDLP--  101 (187)
T ss_pred             hCCCCCCEEEEeCC--CccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEecc----chHhhcCCC--
Confidence            47899998888884  5677788888555 4599999999887766642   577663  33322    223333221  


Q ss_pred             CccEEEeCCCc---hhHHHHHHhhccCCEEEEEe
Q 026217          121 GINIYFENVGG---KMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       121 ~~d~v~d~~g~---~~~~~~~~~l~~~G~~v~~g  151 (241)
                      .+|.+|=--|.   ..++.++..|+++|++|.--
T Consensus       102 ~~daiFIGGg~~i~~ile~~~~~l~~ggrlV~na  135 (187)
T COG2242         102 SPDAIFIGGGGNIEEILEAAWERLKPGGRLVANA  135 (187)
T ss_pred             CCCEEEECCCCCHHHHHHHHHHHcCcCCeEEEEe
Confidence            58988854442   46788999999999998643

>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.21  E-value=0.0046  Score=46.72  Aligned_cols=98  Identities=13%  Similarity=0.155  Sum_probs=65.8

Q ss_pred             HhcCCCCCcEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHH---cCCC---eeecCCCchhHHHHHHH
Q 026217           45 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKNK---FGFD---EAFNYKEEPDLDAALKR  116 (241)
Q Consensus        45 ~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g--~~v~~~~~~~~~~~~~~~~---~g~~---~~i~~~~~~~~~~~i~~  116 (241)
                      +...++++++||-.|  .|.|..+..+++..+  .+|++++.+++-.+.+++.   .+..   .++..    +..+.+. 
T Consensus        66 ~~l~~~~~~~VLDiG--~GsG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~----d~~~~~~-  138 (205)
T PRK13944         66 ELIEPRPGMKILEVG--TGSGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHG----DGKRGLE-  138 (205)
T ss_pred             HhcCCCCCCEEEEEC--cCccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEC----CcccCCc-
Confidence            556788999999998  567888888888764  5999999998877766643   3332   12211    2111111 


Q ss_pred             HCCCCccEEEeCCC-chhHHHHHHhhccCCEEEEE
Q 026217          117 YFPEGINIYFENVG-GKMLDAVLLNMRIQGRITLC  150 (241)
Q Consensus       117 ~~~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~  150 (241)
                       ..+.+|.|+-+.. ........+.|+++|+++..
T Consensus       139 -~~~~fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~  172 (205)
T PRK13944        139 -KHAPFDAIIVTAAASTIPSALVRQLKDGGVLVIP  172 (205)
T ss_pred             -cCCCccEEEEccCcchhhHHHHHhcCcCcEEEEE
Confidence             1237999886655 34456778899999999764

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=97.21  E-value=0.0018  Score=53.14  Aligned_cols=76  Identities=20%  Similarity=0.251  Sum_probs=49.9

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC----C-eeecCCCchhHHHHHHHHCCC-CccE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF----D-EAFNYKEEPDLDAALKRYFPE-GINI  124 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~----~-~~i~~~~~~~~~~~i~~~~~~-~~d~  124 (241)
                      .+.+|||+||+|.+|..+++.+...|.+|+++++++.......+.++.    . ...|..+.    +.+.+...+ ++|+
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~----~~~~~~~~~~~~d~   78 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDA----AKLRKAIAEFKPEI   78 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCH----HHHHHHHhhcCCCE
Confidence            467899999999999999999999999999998766543322112221    1 11233332    223333223 6899


Q ss_pred             EEeCCC
Q 026217          125 YFENVG  130 (241)
Q Consensus       125 v~d~~g  130 (241)
                      |+++++
T Consensus        79 vih~A~   84 (349)
T TIGR02622        79 VFHLAA   84 (349)
T ss_pred             EEECCc
Confidence            999987

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK07201 short chain dehydrogenase; Provisional

Probab=97.21  E-value=0.0028  Score=56.57  Aligned_cols=79  Identities=19%  Similarity=0.310  Sum_probs=54.4

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC-e--eecCCCchhHHHHHHHHCC--CCcc
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYFP--EGIN  123 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~--~i~~~~~~~~~~~i~~~~~--~~~d  123 (241)
                      +.+++|+||+|++|..+++.+...|++|+++++++++.+.+.+++   +.. .  ..|..+..++...+.+...  +++|
T Consensus       371 ~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id  450 (657)
T PRK07201        371 GKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHVD  450 (657)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence            568999999999999999988889999999999988766554232   321 1  2244443233333332211  3699


Q ss_pred             EEEeCCC
Q 026217          124 IYFENVG  130 (241)
Q Consensus       124 ~v~d~~g  130 (241)
                      ++++++|
T Consensus       451 ~li~~Ag  457 (657)
T PRK07201        451 YLVNNAG  457 (657)
T ss_pred             EEEECCC
Confidence            9999987

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=97.20  E-value=0.0062  Score=48.07  Aligned_cols=69  Identities=13%  Similarity=0.109  Sum_probs=50.6

Q ss_pred             CCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEE
Q 026217           48 SPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYF  126 (241)
Q Consensus        48 ~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~  126 (241)
                      +...+.+++|.|+ ||.+++++..++..|+ +|+++.|++++.+.+.+.++..          +...+.   ...+|+|+
T Consensus       118 ~~~~~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~----------~~~~~~---~~~~dlvI  183 (272)
T PRK12550        118 QVPPDLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE----------WRPDLG---GIEADILV  183 (272)
T ss_pred             CCCCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc----------chhhcc---cccCCEEE
Confidence            4445668999996 9999999998989998 7999999998887776455421          111111   12589999


Q ss_pred             eCCC
Q 026217          127 ENVG  130 (241)
Q Consensus       127 d~~g  130 (241)
                      +|+.
T Consensus       184 NaTp  187 (272)
T PRK12550        184 NVTP  187 (272)
T ss_pred             ECCc
Confidence            9986

>TIGR02415 23BDH acetoin reductases

Probab=97.20  E-value=0.0024  Score=49.66  Aligned_cols=77  Identities=12%  Similarity=0.182  Sum_probs=51.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCC-e--eecCCCchhHHHHHHHHCC--CCccEE
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFD-E--AFNYKEEPDLDAALKRYFP--EGINIY  125 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~---~g~~-~--~i~~~~~~~~~~~i~~~~~--~~~d~v  125 (241)
                      +++|+|++|++|...++.+...|++|+.+.+++++.+.+.++   .+.. .  ..|..+..++.+.+.....  +.+|++
T Consensus         2 ~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~v   81 (254)
T TIGR02415         2 VALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDVM   81 (254)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            689999999999999999889999999999887655443322   2321 1  2344443233333333221  368999


Q ss_pred             EeCCC
Q 026217          126 FENVG  130 (241)
Q Consensus       126 ~d~~g  130 (241)
                      +++.|
T Consensus        82 i~~ag   86 (254)
T TIGR02415        82 VNNAG   86 (254)
T ss_pred             EECCC
Confidence            99887

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>TIGR00438 rrmJ cell division protein FtsJ

Probab=97.19  E-value=0.008  Score=44.72  Aligned_cols=97  Identities=15%  Similarity=0.141  Sum_probs=60.5

Q ss_pred             cCCCCCcEEEEEcCCchHHHHHHHHHHHc-C-CEEEEEeCCHHHHHHHHHHcCCCe-eecCCCchhHHHHHHHHCCC-Cc
Q 026217           47 CSPKQGEYVFVSAASGAVGQLVGQFAKLV-G-CYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPE-GI  122 (241)
Q Consensus        47 ~~~~~~~~vlI~ga~g~~G~~avqla~~~-g-~~v~~~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~i~~~~~~-~~  122 (241)
                      ..+++|++||..|+ |+ |..+..+++.. + .+|++++.++..    . ..++.. ..|..+. .....+....++ ++
T Consensus        28 ~~i~~g~~VLDiG~-Gt-G~~~~~l~~~~~~~~~v~~vDis~~~----~-~~~i~~~~~d~~~~-~~~~~l~~~~~~~~~   99 (188)
T TIGR00438        28 KLIKPGDTVLDLGA-AP-GGWSQVAVEQVGGKGRVIAVDLQPMK----P-IENVDFIRGDFTDE-EVLNKIRERVGDDKV   99 (188)
T ss_pred             cccCCCCEEEEecC-CC-CHHHHHHHHHhCCCceEEEEeccccc----c-CCCceEEEeeCCCh-hHHHHHHHHhCCCCc
Confidence            45789999999993 44 44455555554 3 489999988643    2 223331 1243333 444455554444 89


Q ss_pred             cEEEe-CC----C-------------chhHHHHHHhhccCCEEEEEe
Q 026217          123 NIYFE-NV----G-------------GKMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       123 d~v~d-~~----g-------------~~~~~~~~~~l~~~G~~v~~g  151 (241)
                      |+|+. ..    |             ...+..+.++|+++|+++...
T Consensus       100 D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~  146 (188)
T TIGR00438       100 DVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV  146 (188)
T ss_pred             cEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence            99995 21    2             135667888999999998854

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=97.17  E-value=0.0045  Score=47.64  Aligned_cols=70  Identities=24%  Similarity=0.352  Sum_probs=50.7

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH--HHHHHHHHcCCCee-ecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           55 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD--KVDLLKNKFGFDEA-FNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        55 vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~--~~~~~~~~~g~~~~-i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      |+|+||+|.+|...++.+...+.+|.+.+|+++  ..+.++ ..|+..+ .|+.+...+.+.++     ++|.||.+++
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~-~~g~~vv~~d~~~~~~l~~al~-----g~d~v~~~~~   73 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQ-ALGAEVVEADYDDPESLVAALK-----GVDAVFSVTP   73 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHH-HTTTEEEES-TT-HHHHHHHHT-----TCSEEEEESS
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhh-cccceEeecccCCHHHHHHHHc-----CCceEEeecC
Confidence            789999999999999999998899999998764  355666 7787532 34433313333332     5999999888

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.17  E-value=0.004  Score=50.11  Aligned_cols=104  Identities=15%  Similarity=0.229  Sum_probs=68.4

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC----Cee----ecCCCchh---HHHHHHHHC
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF----DEA----FNYKEEPD---LDAALKRYF  118 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~----~~~----i~~~~~~~---~~~~i~~~~  118 (241)
                      -++-+++|+||++|+|..++.-+...|++|+.++|+.++.+.+++++..    ..+    .|-.+..+   +.+.++.. 
T Consensus        33 ~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~-  111 (314)
T KOG1208|consen   33 LSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKK-  111 (314)
T ss_pred             CCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhc-
Confidence            3567899999999999999999999999999999998766666545432    111    23332211   22333211 


Q ss_pred             CCCccEEEeCCCc---h---------------------hHHHHHHhhccC--CEEEEEeeec
Q 026217          119 PEGINIYFENVGG---K---------------------MLDAVLLNMRIQ--GRITLCGMIS  154 (241)
Q Consensus       119 ~~~~d~v~d~~g~---~---------------------~~~~~~~~l~~~--G~~v~~g~~~  154 (241)
                      .++.|+.++.+|-   .                     ....+++.|+..  +|+|.+++..
T Consensus       112 ~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~  173 (314)
T KOG1208|consen  112 EGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSIL  173 (314)
T ss_pred             CCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCcc
Confidence            2379999998872   0                     123455555543  8999987744

>PRK08219 short chain dehydrogenase; Provisional

Probab=97.16  E-value=0.0048  Score=47.07  Aligned_cols=76  Identities=12%  Similarity=0.215  Sum_probs=49.6

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCee--ecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEA--FNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~--i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      .+++|+||+|.+|...+..+... .+|+++++++++.+.+.+.....++  .|..+...+...+...  +++|.++.++|
T Consensus         4 ~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~vi~~ag   80 (227)
T PRK08219          4 PTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQL--GRLDVLVHNAG   80 (227)
T ss_pred             CEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhc--CCCCEEEECCC
Confidence            57999999999999888877766 9999999988776655523311122  2333321222222211  26999999987


Q ss_pred             c
Q 026217          131 G  131 (241)
Q Consensus       131 ~  131 (241)
                      .
T Consensus        81 ~   81 (227)
T PRK08219         81 V   81 (227)
T ss_pred             c
Confidence            3

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=97.16  E-value=0.0043  Score=49.05  Aligned_cols=72  Identities=15%  Similarity=0.179  Sum_probs=51.5

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCCee-ecCCCchhHHHHHHHHCCC-CccEEEe
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEA-FNYKEEPDLDAALKRYFPE-GINIYFE  127 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~-i~~~~~~~~~~~i~~~~~~-~~d~v~d  127 (241)
                      ++.+++|.|| ||.+.+++.-++..|+ +|+++.|+.++.+.+.+.++.... +....       ..+.... .+|+++|
T Consensus       125 ~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~-------~~~~~~~~~~dliIN  196 (283)
T COG0169         125 TGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAA-------LADLEGLEEADLLIN  196 (283)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccc-------ccccccccccCEEEE
Confidence            5789999996 9999999999999997 899999999988888756653211 00000       0001111 3899999


Q ss_pred             CCC
Q 026217          128 NVG  130 (241)
Q Consensus       128 ~~g  130 (241)
                      |++
T Consensus       197 aTp  199 (283)
T COG0169         197 ATP  199 (283)
T ss_pred             CCC
Confidence            997

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=97.15  E-value=0.014  Score=40.28  Aligned_cols=94  Identities=18%  Similarity=0.246  Sum_probs=56.0

Q ss_pred             EEEEcCCchHHHHHHHHHHHcC--CEEEEEeCC--HHHH-HHHHHHcCCCeeecCCCc--hhHHHH--------------
Q 026217           55 VFVSAASGAVGQLVGQFAKLVG--CYVVGSAGS--KDKV-DLLKNKFGFDEAFNYKEE--PDLDAA--------------  113 (241)
Q Consensus        55 vlI~ga~g~~G~~avqla~~~g--~~v~~~~~~--~~~~-~~~~~~~g~~~~i~~~~~--~~~~~~--------------  113 (241)
                      |.|.|++|++|..++++.+++.  ++|++.+..  -+.+ +.++ +|....++-.++.  ..+.+.              
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~-~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~   79 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAR-EFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGP   79 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHH-HHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESH
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHH-HhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeCh
Confidence            6799999999999999999996  688777743  2333 3334 7776655443331  011111              


Q ss_pred             --HHHHCC-CCccEEEeCCCc-hhHHHHHHhhccCCEEEE
Q 026217          114 --LKRYFP-EGINIYFENVGG-KMLDAVLLNMRIQGRITL  149 (241)
Q Consensus       114 --i~~~~~-~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~  149 (241)
                        +.++.. ..+|+|+.++.+ .-+.-.+..++.+-++..
T Consensus        80 ~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~iaL  119 (129)
T PF02670_consen   80 EGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIAL  119 (129)
T ss_dssp             HHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEEE
T ss_pred             HHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEEE
Confidence              222222 368999887764 666677777776655544

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>PRK06701 short chain dehydrogenase; Provisional

Probab=97.14  E-value=0.0034  Score=50.11  Aligned_cols=80  Identities=14%  Similarity=0.174  Sum_probs=50.2

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHH---HcCCCe---eecCCCchhHHHHHHHHCC--CC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD-KVDLLKN---KFGFDE---AFNYKEEPDLDAALKRYFP--EG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~-~~~~~~~---~~g~~~---~i~~~~~~~~~~~i~~~~~--~~  121 (241)
                      ++.+++|+||+|++|...++.+...|++|+.+.++.. ..+.+.+   ..+...   ..|..+...+...+.+...  ++
T Consensus        45 ~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~  124 (290)
T PRK06701         45 KGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGR  124 (290)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4678999999999999999988889999999887642 2222221   223221   2244333123333332211  36


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|+++.++|
T Consensus       125 iD~lI~~Ag  133 (290)
T PRK06701        125 LDILVNNAA  133 (290)
T ss_pred             CCEEEECCc
Confidence            999999887

>PLN02476 O-methyltransferase

Probab=97.14  E-value=0.0096  Score=46.93  Aligned_cols=102  Identities=15%  Similarity=0.147  Sum_probs=69.7

Q ss_pred             hcCCCCCcEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHH---cCCCeeecCCCchhHHHHHHHHC--
Q 026217           46 VCSPKQGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRYF--  118 (241)
Q Consensus        46 ~~~~~~~~~vlI~ga~g~~G~~avqla~~~g--~~v~~~~~~~~~~~~~~~~---~g~~~~i~~~~~~~~~~~i~~~~--  118 (241)
                      ..+..+..+||-.|  +++|..++.+|+.++  .+|+.+..+++..+.+++.   .|..+-+..... +..+.+.++.  
T Consensus       113 L~~~~~ak~VLEIG--T~tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~G-dA~e~L~~l~~~  189 (278)
T PLN02476        113 LVQILGAERCIEVG--VYTGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKHG-LAAESLKSMIQN  189 (278)
T ss_pred             HHHhcCCCeEEEec--CCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHHHHhc
Confidence            35566788999999  788999999998874  4799999999888777643   355432222222 4444444331  


Q ss_pred             --CCCccEEEeCCC-c---hhHHHHHHhhccCCEEEEE
Q 026217          119 --PEGINIYFENVG-G---KMLDAVLLNMRIQGRITLC  150 (241)
Q Consensus       119 --~~~~d~v~d~~g-~---~~~~~~~~~l~~~G~~v~~  150 (241)
                        .+.||+||--.. .   ..+..+++.+++||.++.-
T Consensus       190 ~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~GGvIV~D  227 (278)
T PLN02476        190 GEGSSYDFAFVDADKRMYQDYFELLLQLVRVGGVIVMD  227 (278)
T ss_pred             ccCCCCCEEEECCCHHHHHHHHHHHHHhcCCCcEEEEe
Confidence              247998864443 2   4678889999999988764

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=97.13  E-value=0.0094  Score=43.43  Aligned_cols=95  Identities=15%  Similarity=0.072  Sum_probs=62.0

Q ss_pred             hhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCch-HHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCch
Q 026217           30 GILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGA-VGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEP  108 (241)
Q Consensus        30 a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~-~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~  108 (241)
                      ...|+...++...+.+...--.+.+|+|.|+ |. +|..++..++..|++|+++.++.+                     
T Consensus        22 ~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~-G~~~G~~~a~~L~~~g~~V~v~~r~~~---------------------   79 (168)
T cd01080          22 GFIPCTPAGILELLKRYGIDLAGKKVVVVGR-SNIVGKPLAALLLNRNATVTVCHSKTK---------------------   79 (168)
T ss_pred             CccCChHHHHHHHHHHcCCCCCCCEEEEECC-cHHHHHHHHHHHhhCCCEEEEEECCch---------------------
Confidence            3445555555555544433457899999997 65 699899999999999888886521                     


Q ss_pred             hHHHHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEee
Q 026217          109 DLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       109 ~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      ++.+.+.     .+|+||.+++...+ .-.+.++++-.++.++.
T Consensus        80 ~l~~~l~-----~aDiVIsat~~~~i-i~~~~~~~~~viIDla~  117 (168)
T cd01080          80 NLKEHTK-----QADIVIVAVGKPGL-VKGDMVKPGAVVIDVGI  117 (168)
T ss_pred             hHHHHHh-----hCCEEEEcCCCCce-ecHHHccCCeEEEEccC
Confidence            2333343     38999999987442 22234566555566655

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed

Probab=97.12  E-value=0.0086  Score=44.51  Aligned_cols=97  Identities=13%  Similarity=0.127  Sum_probs=63.6

Q ss_pred             CCCCCcEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HcCCCeeecCCCchhHHHHHHHHCCCCcc
Q 026217           48 SPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYFPEGIN  123 (241)
Q Consensus        48 ~~~~~~~vlI~ga~g~~G~~avqla~~~-g~~v~~~~~~~~~~~~~~~---~~g~~~~i~~~~~~~~~~~i~~~~~~~~d  123 (241)
                      .++++.+||-.|  .|.|..++.+++.. +.+|++++.+++..+.+++   ..+.+. +..... +..+ +..  .+.+|
T Consensus        42 ~l~~g~~VLDiG--cGtG~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~-i~~~~~-d~~~-~~~--~~~fD  114 (187)
T PRK00107         42 YLPGGERVLDVG--SGAGFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKN-VTVVHG-RAEE-FGQ--EEKFD  114 (187)
T ss_pred             hcCCCCeEEEEc--CCCCHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCC-EEEEec-cHhh-CCC--CCCcc
Confidence            355689999998  55666666677654 6799999999887766653   344432 222221 2222 211  33799


Q ss_pred             EEEeCCCc---hhHHHHHHhhccCCEEEEEe
Q 026217          124 IYFENVGG---KMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       124 ~v~d~~g~---~~~~~~~~~l~~~G~~v~~g  151 (241)
                      +|+-....   ..+..+.++|+++|+++.+-
T Consensus       115 lV~~~~~~~~~~~l~~~~~~LkpGG~lv~~~  145 (187)
T PRK00107        115 VVTSRAVASLSDLVELCLPLLKPGGRFLALK  145 (187)
T ss_pred             EEEEccccCHHHHHHHHHHhcCCCeEEEEEe
Confidence            99864432   46778889999999999874

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=97.12  E-value=0.004  Score=49.87  Aligned_cols=74  Identities=24%  Similarity=0.399  Sum_probs=53.5

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHH---HHHHHHcC-CC---eee--cCCCchhHHHHHHHHCCCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKV---DLLKNKFG-FD---EAF--NYKEEPDLDAALKRYFPEG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~---~~~~~~~g-~~---~~i--~~~~~~~~~~~i~~~~~~~  121 (241)
                      .+..|+|+||+|-+|...+..+...|.+|.+++|++++.   +.++ ++. +.   .++  |-.+...+.+.+.     |
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~-~l~~a~~~l~l~~aDL~d~~sf~~ai~-----g   78 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLR-KLEGAKERLKLFKADLLDEGSFDKAID-----G   78 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHH-hcccCcccceEEeccccccchHHHHHh-----C
Confidence            577899999999999999999999999999999998763   3455 544 22   122  2222214444443     6


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|.||.++.
T Consensus        79 cdgVfH~As   87 (327)
T KOG1502|consen   79 CDGVFHTAS   87 (327)
T ss_pred             CCEEEEeCc
Confidence            999998775

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=97.09  E-value=0.0058  Score=45.00  Aligned_cols=79  Identities=15%  Similarity=0.205  Sum_probs=52.7

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC--Ce-e--ecCCCchhHHHHHHHHCC--CCccE
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF--DE-A--FNYKEEPDLDAALKRYFP--EGINI  124 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~--~~-~--i~~~~~~~~~~~i~~~~~--~~~d~  124 (241)
                      ....+|+||++++|++..|.....|++|.+.+......+.....++.  +| .  .|.++..+...-+.+..+  +.+++
T Consensus        14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psv   93 (256)
T KOG1200|consen   14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSV   93 (256)
T ss_pred             cceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCcE
Confidence            35688999999999999999999999999998766654444336654  22 1  223332122222333222  37999


Q ss_pred             EEeCCC
Q 026217          125 YFENVG  130 (241)
Q Consensus       125 v~d~~g  130 (241)
                      +++|.|
T Consensus        94 lVncAG   99 (256)
T KOG1200|consen   94 LVNCAG   99 (256)
T ss_pred             EEEcCc
Confidence            999998

>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional

Probab=97.08  E-value=0.013  Score=48.11  Aligned_cols=95  Identities=16%  Similarity=0.152  Sum_probs=62.3

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHc--CCEEEEEe--CCHHHHHHHHHHcCCCeeecCCCchhHHHHHHH------------
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLV--GCYVVGSA--GSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKR------------  116 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~--g~~v~~~~--~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~------------  116 (241)
                      .+|.|.|++|++|..+++..++.  .++|++.+  ++.++.....++++...++-.+.  .....++.            
T Consensus         2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~--~~~~~l~~~l~~~~~~v~~G   79 (385)
T PRK05447          2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYVVVADE--EAAKELKEALAAAGIEVLAG   79 (385)
T ss_pred             ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCH--HHHHHHHHhhccCCceEEEC
Confidence            46999999999999999998876  56888876  44445544444888765443332  22222222            


Q ss_pred             ------HCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEE
Q 026217          117 ------YFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITL  149 (241)
Q Consensus       117 ------~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~  149 (241)
                            +... .+|+|++++++ ..+...+..++.|-++.+
T Consensus        80 ~~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaL  120 (385)
T PRK05447         80 EEGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIAL  120 (385)
T ss_pred             hhHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEE
Confidence                  2222 58999999876 466667777777666555

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.07  E-value=0.018  Score=45.50  Aligned_cols=92  Identities=14%  Similarity=0.173  Sum_probs=59.4

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC---CeeecCCCchhHHHHHHHHCCCCccEEE
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF---DEAFNYKEEPDLDAALKRYFPEGINIYF  126 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~---~~~i~~~~~~~~~~~i~~~~~~~~d~v~  126 (241)
                      ..+.+++|.|+ |++|.+++..+...|++|+++.+++++.+.+.++++.   ...+      .+.+    ...+.+|+|+
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~------~~~~----~~~~~~DivI  183 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAF------SMDE----LPLHRVDLII  183 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEe------chhh----hcccCccEEE
Confidence            45778999996 9999999988888899999999988776665535432   1111      1111    1112599999


Q ss_pred             eCCCchh---H---HHHHHhhccCCEEEEEee
Q 026217          127 ENVGGKM---L---DAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       127 d~~g~~~---~---~~~~~~l~~~G~~v~~g~  152 (241)
                      +|++...   .   ......++++..++.+..
T Consensus       184 natp~gm~~~~~~~~~~~~~l~~~~~v~D~~y  215 (270)
T TIGR00507       184 NATSAGMSGNIDEPPVPAEKLKEGMVVYDMVY  215 (270)
T ss_pred             ECCCCCCCCCCCCCCCCHHHcCCCCEEEEecc
Confidence            9998531   1   112344666666666543

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=97.07  E-value=0.0063  Score=50.78  Aligned_cols=103  Identities=18%  Similarity=0.166  Sum_probs=63.2

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH------HHHHHc-CCCe-eecCCCchhHHHHHHHHCCCC
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVD------LLKNKF-GFDE-AFNYKEEPDLDAALKRYFPEG  121 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~------~~~~~~-g~~~-~i~~~~~~~~~~~i~~~~~~~  121 (241)
                      ..+.+|+|+||+|.+|..+++.+...|.+|++++++.++.+      ...+.. +... ..|..+...+...+... +++
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~-~~~  136 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSE-GDP  136 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHh-CCC
Confidence            45679999999999999999999889999999998765421      111011 2221 23444431333333322 116


Q ss_pred             ccEEEeCCCch------h-------HHHHHHhhccC--CEEEEEeee
Q 026217          122 INIYFENVGGK------M-------LDAVLLNMRIQ--GRITLCGMI  153 (241)
Q Consensus       122 ~d~v~d~~g~~------~-------~~~~~~~l~~~--G~~v~~g~~  153 (241)
                      +|+||+|++..      .       ...+++.+...  ++++.++..
T Consensus       137 ~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~  183 (390)
T PLN02657        137 VDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAI  183 (390)
T ss_pred             CcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeec
Confidence            99999988631      1       12344444433  478887764

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=97.07  E-value=0.0056  Score=48.15  Aligned_cols=78  Identities=14%  Similarity=0.116  Sum_probs=48.5

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHHcC----CC---eeecCCCchhHH---HH-HHHHC--
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS-KDKVDLLKNKFG----FD---EAFNYKEEPDLD---AA-LKRYF--  118 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~-~~~~~~~~~~~g----~~---~~i~~~~~~~~~---~~-i~~~~--  118 (241)
                      .+++|+||++++|+..++.+...|++|++++++ +++.+.+.+++.    ..   ...|..+...+.   ++ +....  
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            468999999999999999999999999988654 444443332332    11   122444331221   12 22221  


Q ss_pred             CCCccEEEeCCC
Q 026217          119 PEGINIYFENVG  130 (241)
Q Consensus       119 ~~~~d~v~d~~g  130 (241)
                      -+++|++++++|
T Consensus        82 ~g~iD~lv~nAG   93 (267)
T TIGR02685        82 FGRCDVLVNNAS   93 (267)
T ss_pred             cCCceEEEECCc
Confidence            137999999987

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.07  E-value=0.0051  Score=47.92  Aligned_cols=78  Identities=13%  Similarity=0.185  Sum_probs=48.9

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHH---cCCC-e--eecCCCchhHHHHHHHHCC--CCcc
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD-KVDLLKNK---FGFD-E--AFNYKEEPDLDAALKRYFP--EGIN  123 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~-~~~~~~~~---~g~~-~--~i~~~~~~~~~~~i~~~~~--~~~d  123 (241)
                      .+++|+||+|++|..+++.+...|++|++++++.. ..+...+.   .+.. .  ..|..+..++.+.+.....  +.+|
T Consensus         3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   82 (256)
T PRK12745          3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRID   82 (256)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence            47999999999999999998889999999987543 22222112   2221 1  2344443233333332221  3699


Q ss_pred             EEEeCCC
Q 026217          124 IYFENVG  130 (241)
Q Consensus       124 ~v~d~~g  130 (241)
                      +++.+.|
T Consensus        83 ~vi~~ag   89 (256)
T PRK12745         83 CLVNNAG   89 (256)
T ss_pred             EEEECCc
Confidence            9999887

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=97.07  E-value=0.0061  Score=50.79  Aligned_cols=89  Identities=16%  Similarity=0.181  Sum_probs=55.1

Q ss_pred             EEEEcCCchHHHHHHHHHHHcC-C-EEEEEeCCHHHHHHHHHHcC-CC---eeecCCCchhHHHHHHHHCCCCccEEEeC
Q 026217           55 VFVSAASGAVGQLVGQFAKLVG-C-YVVGSAGSKDKVDLLKNKFG-FD---EAFNYKEEPDLDAALKRYFPEGINIYFEN  128 (241)
Q Consensus        55 vlI~ga~g~~G~~avqla~~~g-~-~v~~~~~~~~~~~~~~~~~g-~~---~~i~~~~~~~~~~~i~~~~~~~~d~v~d~  128 (241)
                      |+|+|+ |.+|..+++.+...+ . +|++.+++.++.+.+.+++. ..   ..+|..+.    +.+.++.. +.|+|++|
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~----~~l~~~~~-~~dvVin~   74 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDP----ESLAELLR-GCDVVINC   74 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTH----HHHHHHHT-TSSEEEE-
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCH----HHHHHHHh-cCCEEEEC
Confidence            789998 999999999888775 4 89999999999887763422 21   23454443    12333322 47999999


Q ss_pred             CCchhHHHHHH-hhccCCEEEE
Q 026217          129 VGGKMLDAVLL-NMRIQGRITL  149 (241)
Q Consensus       129 ~g~~~~~~~~~-~l~~~G~~v~  149 (241)
                      +|......+++ |+..+-.++.
T Consensus        75 ~gp~~~~~v~~~~i~~g~~yvD   96 (386)
T PF03435_consen   75 AGPFFGEPVARACIEAGVHYVD   96 (386)
T ss_dssp             SSGGGHHHHHHHHHHHT-EEEE
T ss_pred             CccchhHHHHHHHHHhCCCeec
Confidence            99754344444 4455667766

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.06  E-value=0.0034  Score=49.87  Aligned_cols=75  Identities=13%  Similarity=-0.017  Sum_probs=51.7

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCCe-eecCCCchhHHHHHHHHCCCCccEEEeC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFEN  128 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~i~~~~~~~~d~v~d~  128 (241)
                      ++.+++|.|+ |+.|.+++.-+...|+ +|+++.|+.++.+.+.++++... +....    ..+++.... ..+|+|++|
T Consensus       124 ~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~----~~~~~~~~~-~~~DiVIna  197 (282)
T TIGR01809       124 AGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE----GDSGGLAIE-KAAEVLVST  197 (282)
T ss_pred             CCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc----chhhhhhcc-cCCCEEEEC
Confidence            5778999996 9999999999999998 89999999888777764654321 11111    101111111 259999999


Q ss_pred             CCc
Q 026217          129 VGG  131 (241)
Q Consensus       129 ~g~  131 (241)
                      ++.
T Consensus       198 Tp~  200 (282)
T TIGR01809       198 VPA  200 (282)
T ss_pred             CCC
Confidence            974

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases

Probab=97.06  E-value=0.0023  Score=48.21  Aligned_cols=102  Identities=14%  Similarity=0.124  Sum_probs=68.6

Q ss_pred             hcCCCCCcEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---HcCCCeeecCCCchhHHHHHHHH---
Q 026217           46 VCSPKQGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRY---  117 (241)
Q Consensus        46 ~~~~~~~~~vlI~ga~g~~G~~avqla~~~--g~~v~~~~~~~~~~~~~~~---~~g~~~~i~~~~~~~~~~~i~~~---  117 (241)
                      ..+.....+||-+|  +.+|..++.+|+.+  +.+|+.+..+++..+.+++   ..|...-+..... +..+.+..+   
T Consensus        40 l~~~~~~k~vLEIG--t~~GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~g-da~~~l~~l~~~  116 (205)
T PF01596_consen   40 LVRLTRPKRVLEIG--TFTGYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIEG-DALEVLPELAND  116 (205)
T ss_dssp             HHHHHT-SEEEEES--TTTSHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEES--HHHHHHHHHHT
T ss_pred             HHHhcCCceEEEec--cccccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEEe-ccHhhHHHHHhc
Confidence            34445667899999  88999999999987  5699999999988877763   3354322222222 333444433   


Q ss_pred             C-CCCccEEE-eCCCc---hhHHHHHHhhccCCEEEEE
Q 026217          118 F-PEGINIYF-ENVGG---KMLDAVLLNMRIQGRITLC  150 (241)
Q Consensus       118 ~-~~~~d~v~-d~~g~---~~~~~~~~~l~~~G~~v~~  150 (241)
                      . .+.||+|| |+.-.   ..+..+++++++||.++.-
T Consensus       117 ~~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~ggvii~D  154 (205)
T PF01596_consen  117 GEEGQFDFVFIDADKRNYLEYFEKALPLLRPGGVIIAD  154 (205)
T ss_dssp             TTTTSEEEEEEESTGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cCCCceeEEEEcccccchhhHHHHHhhhccCCeEEEEc
Confidence            2 23799886 55443   4677888999999988774

The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=97.05  E-value=0.0055  Score=47.50  Aligned_cols=81  Identities=20%  Similarity=0.249  Sum_probs=49.9

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHH---cCCC-e--eecCCCchhHHHHHHHHCC--CC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKDKVDLLKNK---FGFD-E--AFNYKEEPDLDAALKRYFP--EG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~-~~~~~~~~~~~---~g~~-~--~i~~~~~~~~~~~i~~~~~--~~  121 (241)
                      ++.+++|+||+|++|...++.+...|++|+++.+ ++++.+.+.+.   .+.. .  -.|..+...+.+.+.+...  +.
T Consensus         5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (247)
T PRK12935          5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGK   84 (247)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            3679999999999999999988889999887654 34443333212   2321 1  1233333133333333221  36


Q ss_pred             ccEEEeCCCc
Q 026217          122 INIYFENVGG  131 (241)
Q Consensus       122 ~d~v~d~~g~  131 (241)
                      +|+++.++|.
T Consensus        85 id~vi~~ag~   94 (247)
T PRK12935         85 VDILVNNAGI   94 (247)
T ss_pred             CCEEEECCCC
Confidence            8999999873

>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional

Probab=97.04  E-value=0.0073  Score=47.54  Aligned_cols=108  Identities=10%  Similarity=0.165  Sum_probs=69.2

Q ss_pred             HHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCC
Q 026217           40 YAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFP  119 (241)
Q Consensus        40 ~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~  119 (241)
                      ...+.....+.++.+||=.|  .|.|..+..+++..+++|++++.+++..+.+++.+....-+..... ++..  ....+
T Consensus        41 ~~~~l~~l~l~~~~~VLDiG--cG~G~~a~~la~~~~~~v~giD~s~~~~~~a~~~~~~~~~i~~~~~-D~~~--~~~~~  115 (263)
T PTZ00098         41 TTKILSDIELNENSKVLDIG--SGLGGGCKYINEKYGAHVHGVDICEKMVNIAKLRNSDKNKIEFEAN-DILK--KDFPE  115 (263)
T ss_pred             HHHHHHhCCCCCCCEEEEEc--CCCChhhHHHHhhcCCEEEEEECCHHHHHHHHHHcCcCCceEEEEC-Cccc--CCCCC
Confidence            33444556889999999998  3456667777777788999999999988888844332111111111 2110  01122


Q ss_pred             CCccEEEeC--C---C----chhHHHHHHhhccCCEEEEEee
Q 026217          120 EGINIYFEN--V---G----GKMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       120 ~~~d~v~d~--~---g----~~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      +.||+|+..  .   +    ...++.+.+.|+|+|+++....
T Consensus       116 ~~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~  157 (263)
T PTZ00098        116 NTFDMIYSRDAILHLSYADKKKLFEKCYKWLKPNGILLITDY  157 (263)
T ss_pred             CCeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence            379999852  1   1    1356788899999999998654

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.04  E-value=0.009  Score=42.80  Aligned_cols=94  Identities=19%  Similarity=0.196  Sum_probs=60.9

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHcCCCe-eecCCCchhHHHHHHHHCCCCccEEEe
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFE  127 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g-~~v~~~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~i~~~~~~~~d~v~d  127 (241)
                      .++.+++|.|+ |++|...++.+...| .+|++.++++++.+.+.++++... ..+..   +..+.+     +++|+|+.
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-----~~~Dvvi~   87 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYL---DLEELL-----AEADLIIN   87 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeec---chhhcc-----ccCCEEEe
Confidence            45688999996 999999999888886 689999998887776554665421 01111   222222     36999999


Q ss_pred             CCCchhH-----HHHHHhhccCCEEEEEee
Q 026217          128 NVGGKML-----DAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       128 ~~g~~~~-----~~~~~~l~~~G~~v~~g~  152 (241)
                      |++....     ......++++..++.++.
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~  117 (155)
T cd01065          88 TTPVGMKPGDELPLPPSLLKPGGVVYDVVY  117 (155)
T ss_pred             CcCCCCCCCCCCCCCHHHcCCCCEEEEcCc
Confidence            9985432     112234556666666644

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.04  E-value=0.0056  Score=52.63  Aligned_cols=73  Identities=16%  Similarity=0.131  Sum_probs=54.1

Q ss_pred             CCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEe
Q 026217           48 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFE  127 (241)
Q Consensus        48 ~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d  127 (241)
                      .+.++++|+|+|. |..|++++++++..|++|++.+.++.+.+.++ +.|+. ++...   ...+.+.     .+|+|+.
T Consensus         8 ~~~~~~~v~V~G~-G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l~-~~g~~-~~~~~---~~~~~l~-----~~D~VV~   76 (488)
T PRK03369          8 PLLPGAPVLVAGA-GVTGRAVLAALTRFGARPTVCDDDPDALRPHA-ERGVA-TVSTS---DAVQQIA-----DYALVVT   76 (488)
T ss_pred             cccCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-hCCCE-EEcCc---chHhHhh-----cCCEEEE
Confidence            3567899999995 99999999999999999999997777666666 67764 32221   1122232     3899999


Q ss_pred             CCCc
Q 026217          128 NVGG  131 (241)
Q Consensus       128 ~~g~  131 (241)
                      +.|-
T Consensus        77 SpGi   80 (488)
T PRK03369         77 SPGF   80 (488)
T ss_pred             CCCC
Confidence            8884

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=97.03  E-value=0.0047  Score=49.09  Aligned_cols=95  Identities=12%  Similarity=0.121  Sum_probs=60.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC-eeecCCCchhHHHHHHHHCC-CC-ccEEEeCCC
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEPDLDAALKRYFP-EG-INIYFENVG  130 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~-~~i~~~~~~~~~~~i~~~~~-~~-~d~v~d~~g  130 (241)
                      +|+|+||+|.+|..+++.+...|.+|.+++|++++..    ..+.. ...|+.+...+...++.... .+ +|.+|-+.+
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~----~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~   76 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA----GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAP   76 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc----CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCC
Confidence            4899999999999999999889999999999876432    22332 23466554234333332111 25 899988776


Q ss_pred             c-----hhHHHHHHhhccCC--EEEEEee
Q 026217          131 G-----KMLDAVLLNMRIQG--RITLCGM  152 (241)
Q Consensus       131 ~-----~~~~~~~~~l~~~G--~~v~~g~  152 (241)
                      .     ......++.++..|  +++.++.
T Consensus        77 ~~~~~~~~~~~~i~aa~~~gv~~~V~~Ss  105 (285)
T TIGR03649        77 PIPDLAPPMIKFIDFARSKGVRRFVLLSA  105 (285)
T ss_pred             CCCChhHHHHHHHHHHHHcCCCEEEEeec
Confidence            3     12334455554443  6777765

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.03  E-value=0.0055  Score=49.32  Aligned_cols=78  Identities=19%  Similarity=0.201  Sum_probs=49.4

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHH---HcCCCe---eecCCCchhHH---HHHHHHCCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK-DKVDLLKN---KFGFDE---AFNYKEEPDLD---AALKRYFPE  120 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~-~~~~~~~~---~~g~~~---~i~~~~~~~~~---~~i~~~~~~  120 (241)
                      .+.+++|+||++++|...++.+...|++|++.+++. +..+.+.+   ..|...   ..|..+.....   +.+.+  -+
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~--~g   88 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVG--LG   88 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH--hC
Confidence            467899999999999999998888999999887643 23322221   233221   12333321222   22223  24


Q ss_pred             CccEEEeCCC
Q 026217          121 GINIYFENVG  130 (241)
Q Consensus       121 ~~d~v~d~~g  130 (241)
                      ++|++++++|
T Consensus        89 ~iD~li~nAG   98 (306)
T PRK07792         89 GLDIVVNNAG   98 (306)
T ss_pred             CCCEEEECCC
Confidence            7999999987

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.03  E-value=0.011  Score=46.88  Aligned_cols=45  Identities=18%  Similarity=0.141  Sum_probs=37.6

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKF   96 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~   96 (241)
                      .+.+++|.|| ||.+.+++.-+...|+ +++++.|+.++.+.+.+.+
T Consensus       126 ~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~  171 (283)
T PRK14027        126 KLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVI  171 (283)
T ss_pred             CCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHH
Confidence            4678999996 9999998888888998 8999999988877776454

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=97.02  E-value=0.004  Score=46.74  Aligned_cols=100  Identities=13%  Similarity=0.067  Sum_probs=62.8

Q ss_pred             HhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCCeeecCCCchhHHHHHHHHCCCC
Q 026217           45 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEPDLDAALKRYFPEG  121 (241)
Q Consensus        45 ~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~~~i~~~~~~~~~~~i~~~~~~~  121 (241)
                      +.....++.+||-.|  .|.|..+..+++. |.+|++++.+++-.+.+++..   +... +..... ++.+ . . .++.
T Consensus        24 ~~l~~~~~~~vLDiG--cG~G~~a~~La~~-g~~V~gvD~S~~~i~~a~~~~~~~~~~~-v~~~~~-d~~~-~-~-~~~~   95 (197)
T PRK11207         24 EAVKVVKPGKTLDLG--CGNGRNSLYLAAN-GFDVTAWDKNPMSIANLERIKAAENLDN-LHTAVV-DLNN-L-T-FDGE   95 (197)
T ss_pred             HhcccCCCCcEEEEC--CCCCHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHcCCCc-ceEEec-Chhh-C-C-cCCC
Confidence            334455678899998  5568888888875 889999999998777766222   2211 111111 2211 1 1 1236


Q ss_pred             ccEEEeCCC----c-----hhHHHHHHhhccCCEEEEEee
Q 026217          122 INIYFENVG----G-----KMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       122 ~d~v~d~~g----~-----~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      +|+|+.+..    .     ..+..+.+.|+++|.++.+..
T Consensus        96 fD~I~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~~~  135 (197)
T PRK11207         96 YDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAA  135 (197)
T ss_pred             cCEEEEecchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEE
Confidence            999987543    1     356778889999999765543

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=97.02  E-value=0.0052  Score=47.76  Aligned_cols=75  Identities=16%  Similarity=0.263  Sum_probs=50.0

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC---eeecCCCchhHHHHHHHHCC--CCccEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEPDLDAALKRYFP--EGINIY  125 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~---~~i~~~~~~~~~~~i~~~~~--~~~d~v  125 (241)
                      ++.+++|+||+|++|...++.+...|++|++++++.     .. ..+..   ...|..+...+.+.+.+...  +++|++
T Consensus         7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~-----~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (252)
T PRK08220          7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF-----LT-QEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVL   80 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch-----hh-hcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            467899999999999999999989999999999775     22 22221   12233333133333333221  369999


Q ss_pred             EeCCCc
Q 026217          126 FENVGG  131 (241)
Q Consensus       126 ~d~~g~  131 (241)
                      +++.|.
T Consensus        81 i~~ag~   86 (252)
T PRK08220         81 VNAAGI   86 (252)
T ss_pred             EECCCc
Confidence            999873

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=97.02  E-value=0.0069  Score=48.36  Aligned_cols=74  Identities=14%  Similarity=0.179  Sum_probs=46.9

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCH---HHHHHHHHHcCC---C---eeecCCCchhHHHHHHHHCCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSK---DKVDLLKNKFGF---D---EAFNYKEEPDLDAALKRYFPE  120 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~---~~~~~~~~~~g~---~---~~i~~~~~~~~~~~i~~~~~~  120 (241)
                      .+.+++|+|| |++|.+++..+...|+ +|+++.|++   ++.+.+.+++..   .   ...+..+.    +.+.... .
T Consensus       125 ~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~----~~~~~~~-~  198 (289)
T PRK12548        125 KGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDT----EKLKAEI-A  198 (289)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhh----hHHHhhh-c
Confidence            4678999997 8999999888888999 599999885   444443324421   1   11222211    1222211 1


Q ss_pred             CccEEEeCCC
Q 026217          121 GINIYFENVG  130 (241)
Q Consensus       121 ~~d~v~d~~g  130 (241)
                      .+|++++|+.
T Consensus       199 ~~DilINaTp  208 (289)
T PRK12548        199 SSDILVNATL  208 (289)
T ss_pred             cCCEEEEeCC
Confidence            4799999886

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.01  E-value=0.0085  Score=47.67  Aligned_cols=71  Identities=20%  Similarity=0.123  Sum_probs=50.2

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCC----CeeecCCCchhHHHHHHHHCCCCccEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGF----DEAFNYKEEPDLDAALKRYFPEGINIY  125 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~g~----~~~i~~~~~~~~~~~i~~~~~~~~d~v  125 (241)
                      .+.+++|.|+ |+.|.+++..+...|+ +|+++.++.++.+.+.+.++.    ..+....   ++.+.+     ..+|+|
T Consensus       126 ~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~---~~~~~~-----~~aDiV  196 (284)
T PRK12549        126 SLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGS---DLAAAL-----AAADGL  196 (284)
T ss_pred             cCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEecc---chHhhh-----CCCCEE
Confidence            4578999996 9999999999999998 899999998887766645432    1121111   222222     249999


Q ss_pred             EeCCC
Q 026217          126 FENVG  130 (241)
Q Consensus       126 ~d~~g  130 (241)
                      ++|+.
T Consensus       197 InaTp  201 (284)
T PRK12549        197 VHATP  201 (284)
T ss_pred             EECCc
Confidence            99975

>PRK07041 short chain dehydrogenase; Provisional

Probab=96.99  E-value=0.0038  Score=47.84  Aligned_cols=73  Identities=16%  Similarity=0.221  Sum_probs=49.9

Q ss_pred             EEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc--CCC-e--eecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           56 FVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF--GFD-E--AFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        56 lI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~--g~~-~--~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      +|+||+|++|...++.+...|++|+++++++++.+.+.+.+  +.. +  ..|..+..++...+...  +++|.+++++|
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--~~id~li~~ag   78 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEA--GPFDHVVITAA   78 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhc--CCCCEEEECCC
Confidence            58999999999999998889999999999877665544333  221 1  23444432333333322  36899999887

>PRK08309 short chain dehydrogenase; Provisional

Probab=96.99  E-value=0.083  Score=38.90  Aligned_cols=91  Identities=15%  Similarity=0.124  Sum_probs=56.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC---e--eecCCCchhHHHHHHHHC--CCCccEEE
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD---E--AFNYKEEPDLDAALKRYF--PEGINIYF  126 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~---~--~i~~~~~~~~~~~i~~~~--~~~~d~v~  126 (241)
                      +++|+||+ ++|..+++.+...|++|+++++++++.+.+...++..   .  ..|..+..++...+....  .+++|.+|
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~lv   80 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLAV   80 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEEE
Confidence            58999987 4555566666778999999999888776665334211   1  135655424444444332  23789999


Q ss_pred             eCCCchhHHHHHHhhccCC
Q 026217          127 ENVGGKMLDAVLLNMRIQG  145 (241)
Q Consensus       127 d~~g~~~~~~~~~~l~~~G  145 (241)
                      +.+-...-......++..|
T Consensus        81 ~~vh~~~~~~~~~~~~~~g   99 (177)
T PRK08309         81 AWIHSSAKDALSVVCRELD   99 (177)
T ss_pred             EeccccchhhHHHHHHHHc
Confidence            9887655455555555544

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=96.99  E-value=0.0082  Score=48.77  Aligned_cols=75  Identities=12%  Similarity=0.110  Sum_probs=48.3

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHcCCC--ee--ecCCCchhHHHHHHHHCCCCccE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKNKFGFD--EA--FNYKEEPDLDAALKRYFPEGINI  124 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g--~~v~~~~~~~~~~~~~~~~~g~~--~~--i~~~~~~~~~~~i~~~~~~~~d~  124 (241)
                      .+.+|||+||+|.+|...++.+...|  .+|+++++++.+.+.+.+.+...  ..  .|..+...+.+.+    . ++|+
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~----~-~iD~   77 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRAL----R-GVDY   77 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHH----h-cCCE
Confidence            36789999999999999888877665  68998887765544443233221  11  2444431222222    2 4999


Q ss_pred             EEeCCC
Q 026217          125 YFENVG  130 (241)
Q Consensus       125 v~d~~g  130 (241)
                      ||+++|
T Consensus        78 Vih~Ag   83 (324)
T TIGR03589        78 VVHAAA   83 (324)
T ss_pred             EEECcc
Confidence            999887

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.97  E-value=0.03  Score=46.58  Aligned_cols=84  Identities=20%  Similarity=0.302  Sum_probs=59.9

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeC
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFEN  128 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~  128 (241)
                      -.+.++||.|| |-+|..++.-+...|. +|++..|+.++...+.+++|+. ++..+   ++.+.+.     .+|+||.+
T Consensus       176 L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~-~~~l~---el~~~l~-----~~DvViss  245 (414)
T COG0373         176 LKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAE-AVALE---ELLEALA-----EADVVISS  245 (414)
T ss_pred             cccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCe-eecHH---HHHHhhh-----hCCEEEEe
Confidence            36788999997 9999999999999997 8999999988877776699953 22222   2333333     49999999


Q ss_pred             CCchh----HHHHHHhhcc
Q 026217          129 VGGKM----LDAVLLNMRI  143 (241)
Q Consensus       129 ~g~~~----~~~~~~~l~~  143 (241)
                      ++++.    -....+.++.
T Consensus       246 Tsa~~~ii~~~~ve~a~~~  264 (414)
T COG0373         246 TSAPHPIITREMVERALKI  264 (414)
T ss_pred             cCCCccccCHHHHHHHHhc
Confidence            99642    2344444444

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.97  E-value=0.0072  Score=46.64  Aligned_cols=79  Identities=22%  Similarity=0.303  Sum_probs=48.9

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHH---HcCCC-e--eecCCCchhHHHHHHHHCC--CCc
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD-KVDLLKN---KFGFD-E--AFNYKEEPDLDAALKRYFP--EGI  122 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~-~~~~~~~---~~g~~-~--~i~~~~~~~~~~~i~~~~~--~~~  122 (241)
                      ..+++|+||+|++|..+++.+...|.+|+++.++.. ..+.+.+   ..+.. +  ..|..+..++.+.+.+...  +++
T Consensus         6 ~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i   85 (249)
T PRK12825          6 GRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGRI   85 (249)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCCC
Confidence            468999999999999999999999998877665543 3222221   22221 1  2344443133333332211  369


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |.++.++|
T Consensus        86 d~vi~~ag   93 (249)
T PRK12825         86 DILVNNAG   93 (249)
T ss_pred             CEEEECCc
Confidence            99999887

>PLN02781 Probable caffeoyl-CoA O-methyltransferase

Probab=96.96  E-value=0.017  Score=44.65  Aligned_cols=103  Identities=13%  Similarity=0.108  Sum_probs=69.0

Q ss_pred             HhcCCCCCcEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHH---cCCCeeecCCCchhHHHHHHHHC-
Q 026217           45 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRYF-  118 (241)
Q Consensus        45 ~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g--~~v~~~~~~~~~~~~~~~~---~g~~~~i~~~~~~~~~~~i~~~~-  118 (241)
                      ...+..++.+||-.|  +++|..++.+++..+  .+|+.+..+++..+.+++.   .|...-+..... +..+.+..+. 
T Consensus        62 ~l~~~~~~~~vLEiG--t~~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~g-da~~~L~~l~~  138 (234)
T PLN02781         62 MLVKIMNAKNTLEIG--VFTGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQS-DALSALDQLLN  138 (234)
T ss_pred             HHHHHhCCCEEEEec--CcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-cHHHHHHHHHh
Confidence            345667788999998  677888888888763  4999999999888877643   344322222222 3444444331 


Q ss_pred             ---CCCccEEEeCCC----chhHHHHHHhhccCCEEEEE
Q 026217          119 ---PEGINIYFENVG----GKMLDAVLLNMRIQGRITLC  150 (241)
Q Consensus       119 ---~~~~d~v~d~~g----~~~~~~~~~~l~~~G~~v~~  150 (241)
                         .+.||+||--..    ...+..+.+++++||.++.-
T Consensus       139 ~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~GG~ii~d  177 (234)
T PLN02781        139 NDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVGGIIAFD  177 (234)
T ss_pred             CCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence               247999975443    24677888999999987753

>PLN00016 RNA-binding protein; Provisional

Probab=96.95  E-value=0.0083  Score=49.84  Aligned_cols=95  Identities=15%  Similarity=0.179  Sum_probs=61.0

Q ss_pred             CcEEEEE----cCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH-----------HHHHcCCCeeecCCCchhHHHHHHH
Q 026217           52 GEYVFVS----AASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDL-----------LKNKFGFDEAFNYKEEPDLDAALKR  116 (241)
Q Consensus        52 ~~~vlI~----ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~-----------~~~~~g~~~~i~~~~~~~~~~~i~~  116 (241)
                      ..+|||+    ||+|-+|..++..+...|.+|+++++++.....           +. ..|...+ ..    ++.+ +..
T Consensus        52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~-~~~v~~v-~~----D~~d-~~~  124 (378)
T PLN00016         52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELS-SAGVKTV-WG----DPAD-VKS  124 (378)
T ss_pred             cceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhh-hcCceEE-Ee----cHHH-HHh
Confidence            3579999    999999999999998899999999987654321           11 2233222 11    2222 222


Q ss_pred             HCCC-CccEEEeCCCc--hhHHHHHHhhccC--CEEEEEeee
Q 026217          117 YFPE-GINIYFENVGG--KMLDAVLLNMRIQ--GRITLCGMI  153 (241)
Q Consensus       117 ~~~~-~~d~v~d~~g~--~~~~~~~~~l~~~--G~~v~~g~~  153 (241)
                      .... ++|+|+++.+.  .....+++.+...  .+++.++..
T Consensus       125 ~~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS~  166 (378)
T PLN00016        125 KVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSA  166 (378)
T ss_pred             hhccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEccH
Confidence            2223 79999999874  2344556666543  378877653

>PRK07023 short chain dehydrogenase; Provisional

Probab=96.95  E-value=0.0069  Score=46.85  Aligned_cols=75  Identities=19%  Similarity=0.220  Sum_probs=48.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC---eeecCCCchhHHHHHHH-----HCC-CCccE
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEPDLDAALKR-----YFP-EGINI  124 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~---~~i~~~~~~~~~~~i~~-----~~~-~~~d~  124 (241)
                      +++|+||+|++|..+++.+...|++|++++++.++. ... ..+..   ...|..+..++...+.+     ... ++.|.
T Consensus         3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~-~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (243)
T PRK07023          3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS-LAA-AAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVL   80 (243)
T ss_pred             eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh-hhh-ccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceE
Confidence            689999999999999999888999999999875432 222 33322   12344443233332222     122 26889


Q ss_pred             EEeCCC
Q 026217          125 YFENVG  130 (241)
Q Consensus       125 v~d~~g  130 (241)
                      ++++.|
T Consensus        81 ~v~~ag   86 (243)
T PRK07023         81 LINNAG   86 (243)
T ss_pred             EEEcCc
Confidence            988876

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=96.95  E-value=0.0024  Score=44.07  Aligned_cols=92  Identities=18%  Similarity=0.172  Sum_probs=54.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHH-cCCEEEEEeCCHH----HHHHHHHHcCCC--eeecCCCchhHHHHHHHHCCCCccEEE
Q 026217           54 YVFVSAASGAVGQLVGQFAKL-VGCYVVGSAGSKD----KVDLLKNKFGFD--EAFNYKEEPDLDAALKRYFPEGINIYF  126 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~-~g~~v~~~~~~~~----~~~~~~~~~g~~--~~i~~~~~~~~~~~i~~~~~~~~d~v~  126 (241)
                      +|+|+|++|-+|+..++.+.. -+.++.+...+..    ..+.-. -.|..  .+.-+  . ++.+.+.     .+|+++
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~-~~~~~~~~~~v~--~-~l~~~~~-----~~DVvI   72 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGE-LAGIGPLGVPVT--D-DLEELLE-----EADVVI   72 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHH-HCTSST-SSBEB--S--HHHHTT-----H-SEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhh-hhCcCCcccccc--h-hHHHhcc-----cCCEEE
Confidence            589999889999999999988 5777666654433    111111 11221  11111  1 3333332     299999


Q ss_pred             eCCCchhHHHHHHhhccCCEEEEEeeec
Q 026217          127 ENVGGKMLDAVLLNMRIQGRITLCGMIS  154 (241)
Q Consensus       127 d~~g~~~~~~~~~~l~~~G~~v~~g~~~  154 (241)
                      |++..+.....++.+...|.-+.+|.++
T Consensus        73 DfT~p~~~~~~~~~~~~~g~~~ViGTTG  100 (124)
T PF01113_consen   73 DFTNPDAVYDNLEYALKHGVPLVIGTTG  100 (124)
T ss_dssp             EES-HHHHHHHHHHHHHHT-EEEEE-SS
T ss_pred             EcCChHHhHHHHHHHHhCCCCEEEECCC
Confidence            9997776666666666668888887754

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PLN03075 nicotianamine synthase; Provisional

Probab=96.94  E-value=0.01  Score=47.11  Aligned_cols=97  Identities=11%  Similarity=0.032  Sum_probs=65.8

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHcCC----CeeecCCCchhHHHHHHHHCCCCccE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKNKFGF----DEAFNYKEEPDLDAALKRYFPEGINI  124 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~--g~~v~~~~~~~~~~~~~~~~~g~----~~~i~~~~~~~~~~~i~~~~~~~~d~  124 (241)
                      +.++|+-.| +|+.|+.++-+++.+  +.+++.++.+++..+.+++.+..    ..-+..... +..+....  .++||+
T Consensus       123 ~p~~VldIG-cGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~-Da~~~~~~--l~~FDl  198 (296)
T PLN03075        123 VPTKVAFVG-SGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTA-DVMDVTES--LKEYDV  198 (296)
T ss_pred             CCCEEEEEC-CCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEEC-chhhcccc--cCCcCE
Confidence            778899999 799999888888665  45899999999988888844422    111222222 23221111  137999


Q ss_pred             EEeCC------Cc--hhHHHHHHhhccCCEEEEEe
Q 026217          125 YFENV------GG--KMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       125 v~d~~------g~--~~~~~~~~~l~~~G~~v~~g  151 (241)
                      ||-.+      ..  ..+....+.|++||.++.=.
T Consensus       199 VF~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~  233 (296)
T PLN03075        199 VFLAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS  233 (296)
T ss_pred             EEEecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence            98765      11  46788889999999887643

>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit

Probab=96.94  E-value=0.017  Score=39.40  Aligned_cols=99  Identities=22%  Similarity=0.302  Sum_probs=66.1

Q ss_pred             HhcCCCCCcEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHH---HcCCCe--eecCCCchhHHHHHHHHC
Q 026217           45 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKDKVDLLKN---KFGFDE--AFNYKEEPDLDAALKRYF  118 (241)
Q Consensus        45 ~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g-~~v~~~~~~~~~~~~~~~---~~g~~~--~i~~~~~~~~~~~i~~~~  118 (241)
                      ....+.++++|+-.|.  |.|..+..+++..+ .+|++++.++...+.+++   .++...  ++..    +....... .
T Consensus        13 ~~~~~~~~~~vldlG~--G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~----~~~~~~~~-~   85 (124)
T TIGR02469        13 SKLRLRPGDVLWDIGA--GSGSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEG----DAPEALED-S   85 (124)
T ss_pred             HHcCCCCCCEEEEeCC--CCCHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEec----cccccChh-h
Confidence            3456777889999993  44999999999874 599999999988877653   233322  2211    11110111 1


Q ss_pred             CCCccEEEeCCCc----hhHHHHHHhhccCCEEEEE
Q 026217          119 PEGINIYFENVGG----KMLDAVLLNMRIQGRITLC  150 (241)
Q Consensus       119 ~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~  150 (241)
                      .+.+|+|+...+.    ..++.+.+.|+++|.++..
T Consensus        86 ~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~  121 (124)
T TIGR02469        86 LPEPDRVFIGGSGGLLQEILEAIWRRLRPGGRIVLN  121 (124)
T ss_pred             cCCCCEEEECCcchhHHHHHHHHHHHcCCCCEEEEE
Confidence            1369999875542    3678899999999998864

This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=96.91  E-value=0.0081  Score=46.94  Aligned_cols=43  Identities=26%  Similarity=0.288  Sum_probs=33.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHH----cCCEEEEEeCCHHHHHHHHHHc
Q 026217           54 YVFVSAASGAVGQLVGQFAKL----VGCYVVGSAGSKDKVDLLKNKF   96 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~----~g~~v~~~~~~~~~~~~~~~~~   96 (241)
                      .++|+||++++|++++..+..    .|++|+.+++++++.+.+.+++
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l   48 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEI   48 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHH
Confidence            589999999999976665443    6999999999988776665343

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase

Probab=96.90  E-value=0.0069  Score=46.12  Aligned_cols=98  Identities=16%  Similarity=0.195  Sum_probs=65.3

Q ss_pred             HhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHH---cCCCe--eecCCCchhHHHHHHHH
Q 026217           45 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDKVDLLKNK---FGFDE--AFNYKEEPDLDAALKRY  117 (241)
Q Consensus        45 ~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~--~v~~~~~~~~~~~~~~~~---~g~~~--~i~~~~~~~~~~~i~~~  117 (241)
                      +...++++++||-.|  .|.|..+..+++..+.  +|++++.+++-.+.+++.   +|.+.  ++..    +..+...  
T Consensus        71 ~~l~~~~~~~VLDiG--~GsG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~----d~~~~~~--  142 (215)
T TIGR00080        71 ELLELKPGMKVLEIG--TGSGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVG----DGTQGWE--  142 (215)
T ss_pred             HHhCCCCcCEEEEEC--CCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEEC----CcccCCc--
Confidence            556789999999998  6778888888887654  799999998877776633   34332  2211    1111110  


Q ss_pred             CCCCccEEEeCCC-chhHHHHHHhhccCCEEEEE
Q 026217          118 FPEGINIYFENVG-GKMLDAVLLNMRIQGRITLC  150 (241)
Q Consensus       118 ~~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~  150 (241)
                      ..+.||.++-... ........+.|+++|+++..
T Consensus       143 ~~~~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~  176 (215)
T TIGR00080       143 PLAPYDRIYVTAAGPKIPEALIDQLKEGGILVMP  176 (215)
T ss_pred             ccCCCCEEEEcCCcccccHHHHHhcCcCcEEEEE
Confidence            1137998875433 34556788899999998864

Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.

>PRK08618 ornithine cyclodeaminase; Validated

Probab=96.90  E-value=0.012  Score=47.73  Aligned_cols=93  Identities=10%  Similarity=0.058  Sum_probs=63.8

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHH-HHcCC-EEEEEeCCHHHHHHHHHHc----CCCeeecCCCchhHHHHHHHHCCCCcc
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFA-KLVGC-YVVGSAGSKDKVDLLKNKF----GFDEAFNYKEEPDLDAALKRYFPEGIN  123 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla-~~~g~-~v~~~~~~~~~~~~~~~~~----g~~~~i~~~~~~~~~~~i~~~~~~~~d  123 (241)
                      +...+++|.|+ |..|...+..+ ...++ +|.+..+++++.+.+.+++    +.. +..+.   ++.+.+.     ..|
T Consensus       125 ~~~~~v~iiGa-G~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~~---~~~~~~~-----~aD  194 (325)
T PRK08618        125 EDAKTLCLIGT-GGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVVN---SADEAIE-----EAD  194 (325)
T ss_pred             CCCcEEEEECC-cHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEeC---CHHHHHh-----cCC
Confidence            45678999994 99998776554 45577 8888899888776665343    332 22222   3444443     499


Q ss_pred             EEEeCCCchhHHHHHHhhccCCEEEEEeee
Q 026217          124 IYFENVGGKMLDAVLLNMRIQGRITLCGMI  153 (241)
Q Consensus       124 ~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~  153 (241)
                      +|+.|+++...... +.+++|-.+..+|..
T Consensus       195 iVi~aT~s~~p~i~-~~l~~G~hV~~iGs~  223 (325)
T PRK08618        195 IIVTVTNAKTPVFS-EKLKKGVHINAVGSF  223 (325)
T ss_pred             EEEEccCCCCcchH-HhcCCCcEEEecCCC
Confidence            99999997544344 788998898899874

>PRK14982 acyl-ACP reductase; Provisional

Probab=96.90  E-value=0.012  Score=47.74  Aligned_cols=93  Identities=17%  Similarity=0.168  Sum_probs=60.9

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHH-HcCC-EEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEe
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAK-LVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFE  127 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~-~~g~-~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d  127 (241)
                      -.+.+|+|+||+|.+|..+++.+. +.|. +++.+.++.++...+.++++...+.      ++.+.+.     .+|+|+.
T Consensus       153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~------~l~~~l~-----~aDiVv~  221 (340)
T PRK14982        153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKIL------SLEEALP-----EADIVVW  221 (340)
T ss_pred             cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHH------hHHHHHc-----cCCEEEE
Confidence            367899999999999998888776 4565 8999998888777766455422121      2322222     4999999


Q ss_pred             CCCc-hhHHHHHHhhccCCEEEEEeee
Q 026217          128 NVGG-KMLDAVLLNMRIQGRITLCGMI  153 (241)
Q Consensus       128 ~~g~-~~~~~~~~~l~~~G~~v~~g~~  153 (241)
                      +++. ..+..-...+++.-.++.++.+
T Consensus       222 ~ts~~~~~~I~~~~l~~~~~viDiAvP  248 (340)
T PRK14982        222 VASMPKGVEIDPETLKKPCLMIDGGYP  248 (340)
T ss_pred             CCcCCcCCcCCHHHhCCCeEEEEecCC
Confidence            9985 3321112344555566666653

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=96.90  E-value=0.026  Score=45.69  Aligned_cols=87  Identities=21%  Similarity=0.169  Sum_probs=62.3

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      .|.++.|.| .|.+|++..+.++..|.+|+...+++. .+..+ +.+..++       ++.+.+++     .|++.-.+.
T Consensus       145 ~gktvGIiG-~GrIG~avA~r~~~Fgm~v~y~~~~~~-~~~~~-~~~~~y~-------~l~ell~~-----sDii~l~~P  209 (324)
T COG1052         145 RGKTLGIIG-LGRIGQAVARRLKGFGMKVLYYDRSPN-PEAEK-ELGARYV-------DLDELLAE-----SDIISLHCP  209 (324)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHhcCCCEEEEECCCCC-hHHHh-hcCceec-------cHHHHHHh-----CCEEEEeCC
Confidence            478999999 599999999999999999999998765 22223 4544432       33444443     887766554


Q ss_pred             -ch-----hHHHHHHhhccCCEEEEEee
Q 026217          131 -GK-----MLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       131 -~~-----~~~~~~~~l~~~G~~v~~g~  152 (241)
                       ++     .-...+..|++++.+|.++.
T Consensus       210 lt~~T~hLin~~~l~~mk~ga~lVNtaR  237 (324)
T COG1052         210 LTPETRHLINAEELAKMKPGAILVNTAR  237 (324)
T ss_pred             CChHHhhhcCHHHHHhCCCCeEEEECCC
Confidence             32     23567778999999998865

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=96.89  E-value=0.0081  Score=46.44  Aligned_cols=79  Identities=15%  Similarity=0.130  Sum_probs=49.9

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHH---HcCCC---eeecCCCchhHHHHHHHHC--CCCcc
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGS-AGSKDKVDLLKN---KFGFD---EAFNYKEEPDLDAALKRYF--PEGIN  123 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~-~~~~~~~~~~~~---~~g~~---~~i~~~~~~~~~~~i~~~~--~~~~d  123 (241)
                      .+++|+||+|++|...++.+...|++|+++ .+++++.+....   ..+..   ...|..+..++.+.+....  .+++|
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id   81 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA   81 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence            379999999999999999888899998774 455554433321   22321   1234444323333333332  24799


Q ss_pred             EEEeCCCc
Q 026217          124 IYFENVGG  131 (241)
Q Consensus       124 ~v~d~~g~  131 (241)
                      +++.++|.
T Consensus        82 ~vi~~ag~   89 (247)
T PRK09730         82 ALVNNAGI   89 (247)
T ss_pred             EEEECCCC
Confidence            99999883

>PRK00811 spermidine synthase; Provisional

Probab=96.89  E-value=0.011  Score=46.94  Aligned_cols=97  Identities=8%  Similarity=0.048  Sum_probs=62.5

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCC-------CeeecCCCchhHHHHHHHHCCCC
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGF-------DEAFNYKEEPDLDAALKRYFPEG  121 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~g~-------~~~i~~~~~~~~~~~i~~~~~~~  121 (241)
                      .+.++||+.|  +|.|..+..++++.+. +|+++..+++-.+.+++.+..       +.-+..... +....+.. .++.
T Consensus        75 ~~p~~VL~iG--~G~G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~~-Da~~~l~~-~~~~  150 (283)
T PRK00811         75 PNPKRVLIIG--GGDGGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVIG-DGIKFVAE-TENS  150 (283)
T ss_pred             CCCCEEEEEe--cCchHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEEC-chHHHHhh-CCCc
Confidence            4567899999  5667778888887665 899999999888888843321       100001111 33333433 3448


Q ss_pred             ccEEEeCCC-----------chhHHHHHHhhccCCEEEEE
Q 026217          122 INIYFENVG-----------GKMLDAVLLNMRIQGRITLC  150 (241)
Q Consensus       122 ~d~v~d~~g-----------~~~~~~~~~~l~~~G~~v~~  150 (241)
                      +|+|+--..           .+.++.+.+.|+++|.++.-
T Consensus       151 yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~  190 (283)
T PRK00811        151 FDVIIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQ  190 (283)
T ss_pred             ccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEe
Confidence            998875321           12457788999999998864

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.89  E-value=0.019  Score=45.41  Aligned_cols=94  Identities=16%  Similarity=0.126  Sum_probs=65.0

Q ss_pred             hcCchhHHHHHHHHHhcC-CCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchh
Q 026217           31 ILGMPGMTAYAGFFEVCS-PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPD  109 (241)
Q Consensus        31 ~l~~~~~ta~~~l~~~~~-~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~  109 (241)
                      -+||.....+..+.. .+ --.|.+++|.|++..+|.-+..++...|++|++..+...                     +
T Consensus       137 ~~PcTp~ai~~ll~~-~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~---------------------~  194 (286)
T PRK14175        137 FVPCTPLGIMEILKH-ADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSK---------------------D  194 (286)
T ss_pred             CCCCcHHHHHHHHHH-cCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch---------------------h
Confidence            345555555555533 33 347889999998777999999999999999998875321                     3


Q ss_pred             HHHHHHHHCCCCccEEEeCCCch-hHHHHHHhhccCCEEEEEeee
Q 026217          110 LDAALKRYFPEGINIYFENVGGK-MLDAVLLNMRIQGRITLCGMI  153 (241)
Q Consensus       110 ~~~~i~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~  153 (241)
                      +.+.++     .+|+|+.++|.. .+..  +.++++..++.+|..
T Consensus       195 l~~~~~-----~ADIVIsAvg~p~~i~~--~~vk~gavVIDvGi~  232 (286)
T PRK14175        195 MASYLK-----DADVIVSAVGKPGLVTK--DVVKEGAVIIDVGNT  232 (286)
T ss_pred             HHHHHh-----hCCEEEECCCCCcccCH--HHcCCCcEEEEcCCC
Confidence            333343     389999999975 3333  457888777788763

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=96.89  E-value=0.017  Score=45.74  Aligned_cols=108  Identities=15%  Similarity=0.186  Sum_probs=73.3

Q ss_pred             CCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC----CeeecCCCchh---HHHHHHHHCCC-
Q 026217           49 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF----DEAFNYKEEPD---LDAALKRYFPE-  120 (241)
Q Consensus        49 ~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~----~~~i~~~~~~~---~~~~i~~~~~~-  120 (241)
                      ..++..|+|+|..+|.|..++.-+...|.+|++.+-.++..+.++.+...    +...|-.++++   ..+.+++..++ 
T Consensus        26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~  105 (322)
T KOG1610|consen   26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGED  105 (322)
T ss_pred             ccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccc
Confidence            34567899999999999999988999999999999887777766623311    11334433312   34555565555 


Q ss_pred             CccEEEeCCC-ch-----------h---------------HHHHHHhhcc-CCEEEEEeeeccc
Q 026217          121 GINIYFENVG-GK-----------M---------------LDAVLLNMRI-QGRITLCGMISQY  156 (241)
Q Consensus       121 ~~d~v~d~~g-~~-----------~---------------~~~~~~~l~~-~G~~v~~g~~~~~  156 (241)
                      +.--++|++| ..           .               ....+..+++ .||++.+++..+.
T Consensus       106 gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR  169 (322)
T KOG1610|consen  106 GLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGR  169 (322)
T ss_pred             cceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccC
Confidence            8888999988 21           1               1223334544 7999999887654

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=96.88  E-value=0.0061  Score=49.35  Aligned_cols=40  Identities=23%  Similarity=0.279  Sum_probs=34.3

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVD   90 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~   90 (241)
                      .|.+|+|+||+|.+|...++.+...|.+|++++++.++.+
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~   43 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRK   43 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchH
Confidence            4679999999999999999988889999998887765433

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=96.87  E-value=0.0077  Score=46.70  Aligned_cols=78  Identities=18%  Similarity=0.140  Sum_probs=47.9

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHH---HcCCC-e--eecCCCchhHHHHHHHHC--CCCcc
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSA-GSKDKVDLLKN---KFGFD-E--AFNYKEEPDLDAALKRYF--PEGIN  123 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~~-~~~~~~~~~~~---~~g~~-~--~i~~~~~~~~~~~i~~~~--~~~~d  123 (241)
                      .+++|+||+|++|...++.+...|++|+++. +++++.+.+.+   ..+.. .  ..|..+..++...+.+..  -+++|
T Consensus         3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   82 (248)
T PRK06947          3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLD   82 (248)
T ss_pred             cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCC
Confidence            4799999999999999999988999887765 44444333221   22322 1  123333213333333221  13699


Q ss_pred             EEEeCCC
Q 026217          124 IYFENVG  130 (241)
Q Consensus       124 ~v~d~~g  130 (241)
                      +++.++|
T Consensus        83 ~li~~ag   89 (248)
T PRK06947         83 ALVNNAG   89 (248)
T ss_pred             EEEECCc
Confidence            9999887

>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]

Probab=96.87  E-value=0.0097  Score=45.70  Aligned_cols=101  Identities=17%  Similarity=0.223  Sum_probs=71.6

Q ss_pred             HhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHc---CCCeeecCCCchhHHHHHHHHCC
Q 026217           45 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEPDLDAALKRYFP  119 (241)
Q Consensus        45 ~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~--~v~~~~~~~~~~~~~~~~~---g~~~~i~~~~~~~~~~~i~~~~~  119 (241)
                      ...++.||++|+=.|  .|.|.+++-||+..|-  +|+.....++..+.+++.+   |....+..... |    +++...
T Consensus        88 ~~~gi~pg~rVlEAG--tGSG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~-D----v~~~~~  160 (256)
T COG2519          88 ARLGISPGSRVLEAG--TGSGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLG-D----VREGID  160 (256)
T ss_pred             HHcCCCCCCEEEEcc--cCchHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEec-c----cccccc
Confidence            457899999999877  6778899999998875  8999999988877776443   43332222222 2    232222


Q ss_pred             C-CccEEE-eCCCc-hhHHHHHHhhccCCEEEEEee
Q 026217          120 E-GINIYF-ENVGG-KMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       120 ~-~~d~v~-d~~g~-~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      + .+|.+| |.--. ..+..+.+.|+++|.++.+..
T Consensus       161 ~~~vDav~LDmp~PW~~le~~~~~Lkpgg~~~~y~P  196 (256)
T COG2519         161 EEDVDAVFLDLPDPWNVLEHVSDALKPGGVVVVYSP  196 (256)
T ss_pred             ccccCEEEEcCCChHHHHHHHHHHhCCCcEEEEEcC
Confidence            3 799775 44443 688899999999999998743

>PLN02589 caffeoyl-CoA O-methyltransferase

Probab=96.87  E-value=0.025  Score=43.89  Aligned_cols=102  Identities=10%  Similarity=0.071  Sum_probs=69.7

Q ss_pred             HhcCCCCCcEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---HcCCCeeecCCCchhHHHHHHHHC-
Q 026217           45 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYF-  118 (241)
Q Consensus        45 ~~~~~~~~~~vlI~ga~g~~G~~avqla~~~--g~~v~~~~~~~~~~~~~~~---~~g~~~~i~~~~~~~~~~~i~~~~-  118 (241)
                      ...+.....+||-.|  +.+|..++.+|+.+  +.+|+.+..+++..+.+++   ..|...-|..... +..+.+.++. 
T Consensus        73 ~l~~~~~ak~iLEiG--T~~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~G-~a~e~L~~l~~  149 (247)
T PLN02589         73 MLLKLINAKNTMEIG--VYTGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFREG-PALPVLDQMIE  149 (247)
T ss_pred             HHHHHhCCCEEEEEe--ChhhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEec-cHHHHHHHHHh
Confidence            344556677899999  78999999999887  4599999999887777663   3354333333333 4444444432 


Q ss_pred             ----CCCccEEEe-CCCc---hhHHHHHHhhccCCEEEE
Q 026217          119 ----PEGINIYFE-NVGG---KMLDAVLLNMRIQGRITL  149 (241)
Q Consensus       119 ----~~~~d~v~d-~~g~---~~~~~~~~~l~~~G~~v~  149 (241)
                          .+.||+||- +--.   ..+..+++++++||.++.
T Consensus       150 ~~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~GGviv~  188 (247)
T PLN02589        150 DGKYHGTFDFIFVDADKDNYINYHKRLIDLVKVGGVIGY  188 (247)
T ss_pred             ccccCCcccEEEecCCHHHhHHHHHHHHHhcCCCeEEEE
Confidence                247998874 3332   467788899999888775

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=96.87  E-value=0.0065  Score=49.23  Aligned_cols=75  Identities=16%  Similarity=0.218  Sum_probs=48.5

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCC---Cee--ecCCCchhHHHHHHHHCCCCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGF---DEA--FNYKEEPDLDAALKRYFPEGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~---~g~---~~~--i~~~~~~~~~~~i~~~~~~~~  122 (241)
                      .+.++||+||+|.+|..+++.+...|.+|+++++++.+.+...+.   .+.   -+.  .|..+...+.+.+.     ++
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----~~   78 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID-----GC   78 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-----CC
Confidence            467899999999999999999999999998888765543322211   111   111  23333312222221     48


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |+|+++++
T Consensus        79 d~vih~A~   86 (325)
T PLN02989         79 ETVFHTAS   86 (325)
T ss_pred             CEEEEeCC
Confidence            99999887

>PRK07402 precorrin-6B methylase; Provisional

Probab=96.86  E-value=0.063  Score=40.18  Aligned_cols=102  Identities=14%  Similarity=0.197  Sum_probs=64.1

Q ss_pred             HHhcCCCCCcEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HcCCCe--eecCCCchhHHHHHHHH
Q 026217           44 FEVCSPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKN---KFGFDE--AFNYKEEPDLDAALKRY  117 (241)
Q Consensus        44 ~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~-g~~v~~~~~~~~~~~~~~~---~~g~~~--~i~~~~~~~~~~~i~~~  117 (241)
                      .....++++++|+=.|  .|.|..++.+++.. +.+|++++.+++..+.+++   +++.+.  ++..    +..+.+...
T Consensus        33 ~~~l~~~~~~~VLDiG--~G~G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~----d~~~~~~~~  106 (196)
T PRK07402         33 ISQLRLEPDSVLWDIG--AGTGTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEG----SAPECLAQL  106 (196)
T ss_pred             HHhcCCCCCCEEEEeC--CCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEEC----chHHHHhhC
Confidence            3455778899988887  56666777777664 5699999999988877763   245432  2221    222222222


Q ss_pred             CCCCccE-EEeCCC--chhHHHHHHhhccCCEEEEEee
Q 026217          118 FPEGINI-YFENVG--GKMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       118 ~~~~~d~-v~d~~g--~~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      . ..+|. +++...  ...+..+.+.|+++|+++....
T Consensus       107 ~-~~~d~v~~~~~~~~~~~l~~~~~~LkpgG~li~~~~  143 (196)
T PRK07402        107 A-PAPDRVCIEGGRPIKEILQAVWQYLKPGGRLVATAS  143 (196)
T ss_pred             C-CCCCEEEEECCcCHHHHHHHHHHhcCCCeEEEEEee
Confidence            2 22344 444322  2567888889999999987643

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=96.85  E-value=0.015  Score=44.20  Aligned_cols=100  Identities=15%  Similarity=0.167  Sum_probs=63.9

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeee------c-CCCc-hh-HHHHHHHHC--
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAF------N-YKEE-PD-LDAALKRYF--  118 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i------~-~~~~-~~-~~~~i~~~~--  118 (241)
                      .++.+||+.|  .|.|.-++-+|. .|.+|++++.++...+.+.++.+.....      . +... .. +...+.+..  
T Consensus        33 ~~~~rvLd~G--CG~G~da~~LA~-~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~  109 (213)
T TIGR03840        33 PAGARVFVPL--CGKSLDLAWLAE-QGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTAA  109 (213)
T ss_pred             CCCCeEEEeC--CCchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCcc
Confidence            5778999998  677888888875 6999999999999888764344432100      0 0000 00 000111111  


Q ss_pred             -CCCccEEEeCCC---------chhHHHHHHhhccCCEEEEEee
Q 026217          119 -PEGINIYFENVG---------GKMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       119 -~~~~d~v~d~~g---------~~~~~~~~~~l~~~G~~v~~g~  152 (241)
                       .+.+|.++|+..         ...+..+.++|+++|+++.++.
T Consensus       110 ~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~  153 (213)
T TIGR03840       110 DLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITL  153 (213)
T ss_pred             cCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEE
Confidence             136899999753         1357789999999998777655

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>PLN02686 cinnamoyl-CoA reductase

Probab=96.85  E-value=0.011  Score=48.90  Aligned_cols=44  Identities=14%  Similarity=0.135  Sum_probs=37.1

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK   93 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~   93 (241)
                      ..+.+|||+||+|.+|..+++.+...|++|+++.++.++.+.++
T Consensus        51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~   94 (367)
T PLN02686         51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLR   94 (367)
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            45779999999999999999999999999998887766555444

>PLN02366 spermidine synthase

Probab=96.83  E-value=0.016  Score=46.55  Aligned_cols=99  Identities=15%  Similarity=0.068  Sum_probs=62.2

Q ss_pred             CCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCC-eeec-----CCCchhHHHHHHHHCCCC
Q 026217           49 PKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFD-EAFN-----YKEEPDLDAALKRYFPEG  121 (241)
Q Consensus        49 ~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~g~~-~~i~-----~~~~~~~~~~i~~~~~~~  121 (241)
                      ..+.++|||.|+  |-|.++..++++-+. +|.++..+++-.+.+++.+... ..++     .... |...-+++..++.
T Consensus        89 ~~~pkrVLiIGg--G~G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~-Da~~~l~~~~~~~  165 (308)
T PLN02366         89 IPNPKKVLVVGG--GDGGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIG-DGVEFLKNAPEGT  165 (308)
T ss_pred             CCCCCeEEEEcC--CccHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEC-hHHHHHhhccCCC
Confidence            355788999994  447777788887665 8999998888778877434210 0010     0011 3333344333447


Q ss_pred             ccEEEe-CCC----------chhHHHHHHhhccCCEEEEE
Q 026217          122 INIYFE-NVG----------GKMLDAVLLNMRIQGRITLC  150 (241)
Q Consensus       122 ~d~v~d-~~g----------~~~~~~~~~~l~~~G~~v~~  150 (241)
                      +|+|+- +..          .+.++.+.++|+++|.++.-
T Consensus       166 yDvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q  205 (308)
T PLN02366        166 YDAIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQ  205 (308)
T ss_pred             CCEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEC
Confidence            998864 221          13477888999999999764

>PRK13243 glyoxylate reductase; Reviewed

Probab=96.83  E-value=0.026  Score=45.99  Aligned_cols=87  Identities=20%  Similarity=0.201  Sum_probs=61.8

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      .|.+|.|+|. |.+|...++.++..|.+|++.+++.+.. ... ..+..    +  . ++.+.+.     ..|+|+-++.
T Consensus       149 ~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~-~~~~~----~--~-~l~ell~-----~aDiV~l~lP  213 (333)
T PRK13243        149 YGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKPE-AEK-ELGAE----Y--R-PLEELLR-----ESDFVSLHVP  213 (333)
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCChh-hHH-HcCCE----e--c-CHHHHHh-----hCCEEEEeCC
Confidence            4679999995 9999999999999999999998765432 233 44432    1  1 3444444     3899998886


Q ss_pred             c-h-----hHHHHHHhhccCCEEEEEee
Q 026217          131 G-K-----MLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       131 ~-~-----~~~~~~~~l~~~G~~v~~g~  152 (241)
                      . +     .....+..++++..++.++.
T Consensus       214 ~t~~T~~~i~~~~~~~mk~ga~lIN~aR  241 (333)
T PRK13243        214 LTKETYHMINEERLKLMKPTAILVNTAR  241 (333)
T ss_pred             CChHHhhccCHHHHhcCCCCeEEEECcC
Confidence            2 2     12456778888888888765

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=96.82  E-value=0.021  Score=43.60  Aligned_cols=92  Identities=18%  Similarity=0.205  Sum_probs=61.0

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCCeeecCCCchhHHHHHHHHCCCCccEEEe
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYFPEGINIYFE  127 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~---~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d  127 (241)
                      +|-+||=.|..|  |++. +-+..+|++|++++.+++..+.++.   +-|.  -+||... . .+++... ++.||+|++
T Consensus        59 ~g~~vLDvGCGg--G~Ls-e~mAr~Ga~VtgiD~se~~I~~Ak~ha~e~gv--~i~y~~~-~-~edl~~~-~~~FDvV~c  130 (243)
T COG2227          59 PGLRVLDVGCGG--GILS-EPLARLGASVTGIDASEKPIEVAKLHALESGV--NIDYRQA-T-VEDLASA-GGQFDVVTC  130 (243)
T ss_pred             CCCeEEEecCCc--cHhh-HHHHHCCCeeEEecCChHHHHHHHHhhhhccc--cccchhh-h-HHHHHhc-CCCccEEEE
Confidence            778888888544  4443 3445568999999999998888872   2222  2566653 2 2333222 148999986


Q ss_pred             CCC-------chhHHHHHHhhccCCEEEEE
Q 026217          128 NVG-------GKMLDAVLLNMRIQGRITLC  150 (241)
Q Consensus       128 ~~g-------~~~~~~~~~~l~~~G~~v~~  150 (241)
                      .--       ...+..+.+.++|+|.++..
T Consensus       131 mEVlEHv~dp~~~~~~c~~lvkP~G~lf~S  160 (243)
T COG2227         131 MEVLEHVPDPESFLRACAKLVKPGGILFLS  160 (243)
T ss_pred             hhHHHccCCHHHHHHHHHHHcCCCcEEEEe
Confidence            432       24677899999999988764

>PRK06123 short chain dehydrogenase; Provisional

Probab=96.81  E-value=0.0095  Score=46.15  Aligned_cols=79  Identities=16%  Similarity=0.215  Sum_probs=48.5

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHH---HcCCCe---eecCCCchhHHHHHHHHCC--CCc
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSA-GSKDKVDLLKN---KFGFDE---AFNYKEEPDLDAALKRYFP--EGI  122 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~-~~~~~~~~~~~---~~g~~~---~i~~~~~~~~~~~i~~~~~--~~~  122 (241)
                      +.+++|+||+|++|...++.+...|++|+... +++++.+.+.+   ..+...   ..|..+...+...+.....  +.+
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL   81 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            45799999999999999988888899877765 34443333321   233221   2244443233333333221  368


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |+++.++|
T Consensus        82 d~li~~ag   89 (248)
T PRK06123         82 DALVNNAG   89 (248)
T ss_pred             CEEEECCC
Confidence            99999887

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=96.80  E-value=0.0088  Score=45.86  Aligned_cols=74  Identities=14%  Similarity=0.209  Sum_probs=51.4

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC-eeecCCCchhHHHHHHHHCCCCccEEEeCCCc
Q 026217           55 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEPDLDAALKRYFPEGINIYFENVGG  131 (241)
Q Consensus        55 vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~-~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~  131 (241)
                      |||+||+|-+|..++..+...|..|+.+.+++........+.... ...|..+...+.+.+...   .+|.|+.+++.
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~---~~d~vi~~a~~   75 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKA---NIDVVIHLAAF   75 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHH---TESEEEEEBSS
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeecccccccccccccc---CceEEEEeecc
Confidence            799999999999999999999999998887776655544223322 233444431333333332   68999998874

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=96.80  E-value=0.013  Score=45.25  Aligned_cols=78  Identities=15%  Similarity=0.197  Sum_probs=48.4

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHcC---CC-e--eecCCCchhHHHHHHHHC--CCCcc
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD-KVDLLKNKFG---FD-E--AFNYKEEPDLDAALKRYF--PEGIN  123 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~-~~~~~~~~~g---~~-~--~i~~~~~~~~~~~i~~~~--~~~~d  123 (241)
                      .+++|+|++|++|..+++.+...|++|+++++++. ..+...+.+.   .. .  ..|..+..++.+.+....  -+++|
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id   82 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVD   82 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            47999999999999999988888999999998743 1221211222   11 1  234443313333232221  13699


Q ss_pred             EEEeCCC
Q 026217          124 IYFENVG  130 (241)
Q Consensus       124 ~v~d~~g  130 (241)
                      +++++.|
T Consensus        83 ~vi~~ag   89 (245)
T PRK12824         83 ILVNNAG   89 (245)
T ss_pred             EEEECCC
Confidence            9999887

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=96.80  E-value=0.018  Score=47.30  Aligned_cols=76  Identities=20%  Similarity=0.229  Sum_probs=50.2

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc--CCC-eee--cCCCchhHHHHHHHHCCCCccE
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF--GFD-EAF--NYKEEPDLDAALKRYFPEGINI  124 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~--g~~-~~i--~~~~~~~~~~~i~~~~~~~~d~  124 (241)
                      ..+.+|||+||+|.+|..+++.+...|.+|++++++.++.+.+.+.+  +.. .++  |..+.    ..+.+... ++|+
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~----~~~~~~~~-~~d~   82 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEE----GSFDEAVK-GCDG   82 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCH----HHHHHHHc-CCCE
Confidence            45678999999999999999999889999999988766554433232  111 122  33332    12222222 4899


Q ss_pred             EEeCCC
Q 026217          125 YFENVG  130 (241)
Q Consensus       125 v~d~~g  130 (241)
                      ||.+++
T Consensus        83 Vih~A~   88 (353)
T PLN02896         83 VFHVAA   88 (353)
T ss_pred             EEECCc
Confidence            999886

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=96.79  E-value=0.021  Score=46.07  Aligned_cols=89  Identities=15%  Similarity=0.229  Sum_probs=59.9

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~--~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      .+|.|+| .|.+|...+..++..|.  +|++.++++++.+.++ +.|....+.  .  +..+.+     ..+|+|+.|+.
T Consensus         7 ~~I~IIG-~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~-~~g~~~~~~--~--~~~~~~-----~~aDvViiavp   75 (307)
T PRK07502          7 DRVALIG-IGLIGSSLARAIRRLGLAGEIVGADRSAETRARAR-ELGLGDRVT--T--SAAEAV-----KGADLVILCVP   75 (307)
T ss_pred             cEEEEEe-eCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHH-hCCCCceec--C--CHHHHh-----cCCCEEEECCC
Confidence            5799999 59999999988888885  8999999998888888 777521111  1  222222     24899999988


Q ss_pred             chhH----HHHHHhhccCCEEEEEee
Q 026217          131 GKML----DAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       131 ~~~~----~~~~~~l~~~G~~v~~g~  152 (241)
                      ....    ......++++..++.+|.
T Consensus        76 ~~~~~~v~~~l~~~l~~~~iv~dvgs  101 (307)
T PRK07502         76 VGASGAVAAEIAPHLKPGAIVTDVGS  101 (307)
T ss_pred             HHHHHHHHHHHHhhCCCCCEEEeCcc
Confidence            5432    333344556666655554

>PLN03139 formate dehydrogenase; Provisional

Probab=96.79  E-value=0.033  Score=46.19  Aligned_cols=89  Identities=24%  Similarity=0.201  Sum_probs=62.4

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      .|.+|.|+| .|.+|+..++.++.+|.+|++.+++....+... +.|+..+    +  ++.+.+.     .+|+|+.++.
T Consensus       198 ~gktVGIVG-~G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~-~~g~~~~----~--~l~ell~-----~sDvV~l~lP  264 (386)
T PLN03139        198 EGKTVGTVG-AGRIGRLLLQRLKPFNCNLLYHDRLKMDPELEK-ETGAKFE----E--DLDAMLP-----KCDVVVINTP  264 (386)
T ss_pred             CCCEEEEEe-ecHHHHHHHHHHHHCCCEEEEECCCCcchhhHh-hcCceec----C--CHHHHHh-----hCCEEEEeCC
Confidence            567999999 599999999999999999999887644444444 5554321    1  3444443     3899988776


Q ss_pred             c-h-----hHHHHHHhhccCCEEEEEee
Q 026217          131 G-K-----MLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       131 ~-~-----~~~~~~~~l~~~G~~v~~g~  152 (241)
                      . +     .-...+..|+++..++.++.
T Consensus       265 lt~~T~~li~~~~l~~mk~ga~lIN~aR  292 (386)
T PLN03139        265 LTEKTRGMFNKERIAKMKKGVLIVNNAR  292 (386)
T ss_pred             CCHHHHHHhCHHHHhhCCCCeEEEECCC
Confidence            2 2     12456778888888888764

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=96.78  E-value=0.044  Score=42.09  Aligned_cols=90  Identities=14%  Similarity=0.233  Sum_probs=58.2

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCC---EEEEEeCC----HHH--------HHHHHHHcCCCeeecCCCchhHHHHH
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGC---YVVGSAGS----KDK--------VDLLKNKFGFDEAFNYKEEPDLDAAL  114 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~---~v~~~~~~----~~~--------~~~~~~~~g~~~~i~~~~~~~~~~~i  114 (241)
                      -.+.+++|.|| |+.|..++..+...|+   ++++++++    .++        .++++ .++... .+   . ++.+.+
T Consensus        23 l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~-~~~~~~-~~---~-~l~~~l   95 (226)
T cd05311          23 IEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAK-ETNPEK-TG---G-TLKEAL   95 (226)
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHH-HhccCc-cc---C-CHHHHH
Confidence            45679999997 9999999988888897   48888887    332        33334 443211 11   1 343444


Q ss_pred             HHHCCCCccEEEeCCCchhH-HHHHHhhccCCEEEEEe
Q 026217          115 KRYFPEGINIYFENVGGKML-DAVLLNMRIQGRITLCG  151 (241)
Q Consensus       115 ~~~~~~~~d~v~d~~g~~~~-~~~~~~l~~~G~~v~~g  151 (241)
                      +     ++|+++++++...+ ...++.+.++..++.+.
T Consensus        96 ~-----~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~ls  128 (226)
T cd05311          96 K-----GADVFIGVSRPGVVKKEMIKKMAKDPIVFALA  128 (226)
T ss_pred             h-----cCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeC
Confidence            2     38999999974332 35666677766666544

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PRK12744 short chain dehydrogenase; Provisional

Probab=96.77  E-value=0.014  Score=45.63  Aligned_cols=81  Identities=12%  Similarity=0.130  Sum_probs=48.9

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH----HHHHHHHH---HcCCC---eeecCCCchhHHHHHHHHC--
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK----DKVDLLKN---KFGFD---EAFNYKEEPDLDAALKRYF--  118 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~----~~~~~~~~---~~g~~---~~i~~~~~~~~~~~i~~~~--  118 (241)
                      .+.+++|+||+|++|...++.+...|++|++++++.    +..+.+.+   ..+..   ...|..+..++...+....  
T Consensus         7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (257)
T PRK12744          7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAA   86 (257)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence            457899999999999999999988999877665332    22222211   22322   1234444323333333221  


Q ss_pred             CCCccEEEeCCCc
Q 026217          119 PEGINIYFENVGG  131 (241)
Q Consensus       119 ~~~~d~v~d~~g~  131 (241)
                      .+++|++++++|.
T Consensus        87 ~~~id~li~~ag~   99 (257)
T PRK12744         87 FGRPDIAINTVGK   99 (257)
T ss_pred             hCCCCEEEECCcc
Confidence            1369999998873

>PRK12827 short chain dehydrogenase; Provisional

Probab=96.75  E-value=0.011  Score=45.69  Aligned_cols=80  Identities=20%  Similarity=0.240  Sum_probs=48.8

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC----CHHHHHHHHHH---cCCC-e--eecCCCchhHHHHHHHHC--
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG----SKDKVDLLKNK---FGFD-E--AFNYKEEPDLDAALKRYF--  118 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~----~~~~~~~~~~~---~g~~-~--~i~~~~~~~~~~~i~~~~--  118 (241)
                      .+.+++|+||+|++|+..++.+...|++|+++++    +++..+.+.++   .+.. .  ..|..+...+...+....  
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   84 (249)
T PRK12827          5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEE   84 (249)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            3568999999999999999888889999888654    33333333212   2222 1  223333312333332221  


Q ss_pred             CCCccEEEeCCC
Q 026217          119 PEGINIYFENVG  130 (241)
Q Consensus       119 ~~~~d~v~d~~g  130 (241)
                      .+++|.++.++|
T Consensus        85 ~~~~d~vi~~ag   96 (249)
T PRK12827         85 FGRLDILVNNAG   96 (249)
T ss_pred             hCCCCEEEECCC
Confidence            136999999987

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=96.74  E-value=0.0031  Score=48.94  Aligned_cols=66  Identities=14%  Similarity=0.113  Sum_probs=47.0

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCc
Q 026217           55 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG  131 (241)
Q Consensus        55 vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~  131 (241)
                      |+|+||+|-+|...++..+..|..|++++|++.+.+... ...   +.  ..     +.+.+....++|+|+|-+|.
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~-~~~---v~--~~-----~~~~~~~~~~~DavINLAG~   66 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNL-HPN---VT--LW-----EGLADALTLGIDAVINLAGE   66 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhc-Ccc---cc--cc-----chhhhcccCCCCEEEECCCC
Confidence            689999999999999999999999999999887766443 211   10  11     11222212269999998884

>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []

Probab=96.74  E-value=0.009  Score=46.29  Aligned_cols=105  Identities=15%  Similarity=0.212  Sum_probs=66.0

Q ss_pred             HhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHH---cCCCeeecCCCchhHHH-HHHHHC
Q 026217           45 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDA-ALKRYF  118 (241)
Q Consensus        45 ~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~--~v~~~~~~~~~~~~~~~~---~g~~~~i~~~~~~~~~~-~i~~~~  118 (241)
                      ...++.||++|+--|  .|.|.++.-+++..|-  +|+....++++.+.++++   +|....+..... |+.+ ...+-.
T Consensus        34 ~~l~i~pG~~VlEaG--tGSG~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~-Dv~~~g~~~~~  110 (247)
T PF08704_consen   34 MRLDIRPGSRVLEAG--TGSGSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHR-DVCEEGFDEEL  110 (247)
T ss_dssp             HHTT--TT-EEEEE----TTSHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES--GGCG--STT-
T ss_pred             HHcCCCCCCEEEEec--CCcHHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEec-ceecccccccc
Confidence            457999999999987  6678888888888764  999999999988777754   444322211111 2211 111111


Q ss_pred             CCCccEEE-eCCCc-hhHHHHHHhh-ccCCEEEEEee
Q 026217          119 PEGINIYF-ENVGG-KMLDAVLLNM-RIQGRITLCGM  152 (241)
Q Consensus       119 ~~~~d~v~-d~~g~-~~~~~~~~~l-~~~G~~v~~g~  152 (241)
                      +..+|.|| |--.. ..+..+.+.| +++|+++.+..
T Consensus       111 ~~~~DavfLDlp~Pw~~i~~~~~~L~~~gG~i~~fsP  147 (247)
T PF08704_consen  111 ESDFDAVFLDLPDPWEAIPHAKRALKKPGGRICCFSP  147 (247)
T ss_dssp             TTSEEEEEEESSSGGGGHHHHHHHE-EEEEEEEEEES
T ss_pred             cCcccEEEEeCCCHHHHHHHHHHHHhcCCceEEEECC
Confidence            23688775 54443 6889999999 89999999854

; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.

>PRK07574 formate dehydrogenase; Provisional

Probab=96.73  E-value=0.04  Score=45.76  Aligned_cols=89  Identities=13%  Similarity=0.059  Sum_probs=62.3

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      .|.+|.|+|. |.+|+.+++.++.+|.+|++.+++....+..+ .+|....    .  ++.+.++     .+|+|+-++.
T Consensus       191 ~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~-~~g~~~~----~--~l~ell~-----~aDvV~l~lP  257 (385)
T PRK07574        191 EGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQ-ELGLTYH----V--SFDSLVS-----VCDVVTIHCP  257 (385)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCCCchhhHh-hcCceec----C--CHHHHhh-----cCCEEEEcCC
Confidence            4678999995 99999999999999999999998753334334 4553211    1  3443443     4899998887


Q ss_pred             c-hh-----HHHHHHhhccCCEEEEEee
Q 026217          131 G-KM-----LDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       131 ~-~~-----~~~~~~~l~~~G~~v~~g~  152 (241)
                      . +.     -...+..|+++..++.++.
T Consensus       258 lt~~T~~li~~~~l~~mk~ga~lIN~aR  285 (385)
T PRK07574        258 LHPETEHLFDADVLSRMKRGSYLVNTAR  285 (385)
T ss_pred             CCHHHHHHhCHHHHhcCCCCcEEEECCC
Confidence            2 21     1456778888888888764

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=96.73  E-value=0.019  Score=43.75  Aligned_cols=103  Identities=13%  Similarity=0.098  Sum_probs=59.9

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCH-------------------HHHHHHHHHcC---C-CeeecCCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSK-------------------DKVDLLKNKFG---F-DEAFNYKE  106 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~-------------------~~~~~~~~~~g---~-~~~i~~~~  106 (241)
                      +..+|+|.|. ||+|.+++..+.+.|+ ++..++..+                   .+.+.++|..-   . -++.-.++
T Consensus        29 ~~~~V~VvGi-GGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~  107 (263)
T COG1179          29 KQAHVCVVGI-GGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIND  107 (263)
T ss_pred             hhCcEEEEec-CchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHh
Confidence            3467999995 9999999999999998 777766321                   12222221111   0 01111111


Q ss_pred             chhHHHHHHHHCCCCccEEEeCCCc--hhHHHHHHhhccCCEEEEEeeecc
Q 026217          107 EPDLDAALKRYFPEGINIYFENVGG--KMLDAVLLNMRIQGRITLCGMISQ  155 (241)
Q Consensus       107 ~~~~~~~i~~~~~~~~d~v~d~~g~--~~~~~~~~~l~~~G~~v~~g~~~~  155 (241)
                      . =..+.+.++...++|+|+||.-+  .....+..|.+.+=.++..+..++
T Consensus       108 f-~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~ki~vIss~Gag~  157 (263)
T COG1179         108 F-ITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNKIPVISSMGAGG  157 (263)
T ss_pred             h-hCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcCCCEEeeccccC
Confidence            0 11233444555589999999986  233444445666667777665443

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=96.72  E-value=0.0041  Score=50.81  Aligned_cols=37  Identities=16%  Similarity=0.250  Sum_probs=32.6

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD   87 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~   87 (241)
                      ++.+|||+||+|.+|...++.+...|.+|++++++++
T Consensus         5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~   41 (340)
T PLN02653          5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSS   41 (340)
T ss_pred             CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccc
Confidence            4578999999999999999999999999999987643

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.72  E-value=0.01  Score=46.26  Aligned_cols=35  Identities=20%  Similarity=0.127  Sum_probs=30.1

Q ss_pred             CCcEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCC
Q 026217           51 QGEYVFVSAAS--GAVGQLVGQFAKLVGCYVVGSAGS   85 (241)
Q Consensus        51 ~~~~vlI~ga~--g~~G~~avqla~~~g~~v~~~~~~   85 (241)
                      .+.+++|+||+  |++|...+..+...|++|++++++
T Consensus         4 ~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~   40 (256)
T PRK12748          4 MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWS   40 (256)
T ss_pred             CCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCC
Confidence            35789999998  489999888888889999999876

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.71  E-value=0.0098  Score=43.00  Aligned_cols=43  Identities=21%  Similarity=0.250  Sum_probs=39.2

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK   93 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~   93 (241)
                      .|..|+++|+.-++|+..++-+.+.|++|+++.|+++.+..+-
T Consensus         6 aG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV   48 (245)
T KOG1207|consen    6 AGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLV   48 (245)
T ss_pred             cceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHH
Confidence            5778999999889999999999999999999999999887776

>PRK06924 short chain dehydrogenase; Provisional

Probab=96.70  E-value=0.016  Score=45.00  Aligned_cols=41  Identities=17%  Similarity=0.323  Sum_probs=34.1

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHH
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK-DKVDLLK   93 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~-~~~~~~~   93 (241)
                      .+++|+||+|++|...++.+...|++|+++++++ ++.+.+.
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~   43 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLA   43 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHH
Confidence            3799999999999999999888999999999876 4444444

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=96.70  E-value=0.009  Score=48.00  Aligned_cols=38  Identities=11%  Similarity=0.209  Sum_probs=32.2

Q ss_pred             CCcEEEEEcC--CchHHHHHHHHHHHcCCEEEEEeCCHHHH
Q 026217           51 QGEYVFVSAA--SGAVGQLVGQFAKLVGCYVVGSAGSKDKV   89 (241)
Q Consensus        51 ~~~~vlI~ga--~g~~G~~avqla~~~g~~v~~~~~~~~~~   89 (241)
                      .|.+++|+||  ++|+|.++++.+...|++|++ +++.+++
T Consensus         8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l   47 (303)
T PLN02730          8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPAL   47 (303)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchh
Confidence            5789999999  799999999999999999988 5454443

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=96.70  E-value=0.047  Score=40.33  Aligned_cols=96  Identities=16%  Similarity=0.143  Sum_probs=53.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC--CeeecCCC--chhHHHHHHHH---C---CC-Cc
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF--DEAFNYKE--EPDLDAALKRY---F---PE-GI  122 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~--~~~i~~~~--~~~~~~~i~~~---~---~~-~~  122 (241)
                      +|.|.|+ |.+|...+.++...|.+|+..+.+++..+..++.+..  +.......  .......+..+   +   .- ++
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~~~dl~~~~~a   79 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIERLLDRLVRKGRLSQEEADAALARISFTTDLEEAVDA   79 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHHHHHHHHHTTTTTHHHHHHHHHTEEEESSGGGGCTE
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHHHHhhhhhhccchhhhhhhhhhhcccccCHHHHhhh
Confidence            5889996 9999998888888899999999999877666532211  11111110  00111122111   1   11 79


Q ss_pred             cEEEeCCCch------hHHHHHHhhccCCEEEEE
Q 026217          123 NIYFENVGGK------MLDAVLLNMRIQGRITLC  150 (241)
Q Consensus       123 d~v~d~~g~~------~~~~~~~~l~~~G~~v~~  150 (241)
                      |+|+|++..+      .+..+-+.+.++-.+.+-
T Consensus        80 dlViEai~E~l~~K~~~~~~l~~~~~~~~ilasn  113 (180)
T PF02737_consen   80 DLVIEAIPEDLELKQELFAELDEICPPDTILASN  113 (180)
T ss_dssp             SEEEE-S-SSHHHHHHHHHHHHCCS-TTSEEEE-
T ss_pred             heehhhccccHHHHHHHHHHHHHHhCCCceEEec
Confidence            9999999742      344444455555555543

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.69  E-value=0.015  Score=45.37  Aligned_cols=79  Identities=14%  Similarity=0.151  Sum_probs=48.9

Q ss_pred             CCcEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCC-----------HHHH----HHHHHHcCCCe---eecCCCchhH
Q 026217           51 QGEYVFVSAAS--GAVGQLVGQFAKLVGCYVVGSAGS-----------KDKV----DLLKNKFGFDE---AFNYKEEPDL  110 (241)
Q Consensus        51 ~~~~vlI~ga~--g~~G~~avqla~~~g~~v~~~~~~-----------~~~~----~~~~~~~g~~~---~i~~~~~~~~  110 (241)
                      ++.+++|+||+  +++|...++.+...|++|++++++           .++.    +.++ +.|...   ..|..+.+++
T Consensus         5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~D~~~~~~i   83 (256)
T PRK12859          5 KNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELL-KNGVKVSSMELDLTQNDAP   83 (256)
T ss_pred             CCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHH-hcCCeEEEEEcCCCCHHHH
Confidence            57899999997  489999999999999999887532           1221    2222 334321   2344443233


Q ss_pred             HHHHHHHCC--CCccEEEeCCC
Q 026217          111 DAALKRYFP--EGINIYFENVG  130 (241)
Q Consensus       111 ~~~i~~~~~--~~~d~v~d~~g  130 (241)
                      .+.+.....  +.+|+++.++|
T Consensus        84 ~~~~~~~~~~~g~id~li~~ag  105 (256)
T PRK12859         84 KELLNKVTEQLGYPHILVNNAA  105 (256)
T ss_pred             HHHHHHHHHHcCCCcEEEECCC
Confidence            333333321  36899999886

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.68  E-value=0.022  Score=43.02  Aligned_cols=92  Identities=18%  Similarity=0.124  Sum_probs=60.0

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD-KVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV  129 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~-~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~  129 (241)
                      .|.+|+|.|| |.+|..-++.+...|++|++++.... ....+. +.|--..+ ..+. . ...+     .++++|+-++
T Consensus         8 ~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~-~~~~i~~~-~~~~-~-~~dl-----~~~~lVi~at   77 (205)
T TIGR01470         8 EGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELESELTLLA-EQGGITWL-ARCF-D-ADIL-----EGAFLVIAAT   77 (205)
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHH-HcCCEEEE-eCCC-C-HHHh-----CCcEEEEECC
Confidence            4678999996 99999999999999999998885432 333333 33311111 1111 1 1112     2599999999


Q ss_pred             Cch-hHHHHHHhhccCCEEEEEee
Q 026217          130 GGK-MLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       130 g~~-~~~~~~~~l~~~G~~v~~g~  152 (241)
                      +.. ....+...++..|..+.+..
T Consensus        78 ~d~~ln~~i~~~a~~~~ilvn~~d  101 (205)
T TIGR01470        78 DDEELNRRVAHAARARGVPVNVVD  101 (205)
T ss_pred             CCHHHHHHHHHHHHHcCCEEEECC
Confidence            975 55566666677788776543

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.67  E-value=0.028  Score=47.67  Aligned_cols=44  Identities=20%  Similarity=0.372  Sum_probs=36.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHHcCC
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKV-DLLKNKFGF   98 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~-~~~~~~~g~   98 (241)
                      +|+|+||.|.+|.+.+..++..|.+|++.++++++. +.+. ++|.
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~-~~gv   46 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAK-ELGV   46 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHH-HcCC
Confidence            588999789999999999999999999999887765 4444 6665

>PLN00203 glutamyl-tRNA reductase

Probab=96.67  E-value=0.029  Score=48.45  Aligned_cols=72  Identities=22%  Similarity=0.309  Sum_probs=52.3

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCCe--eecCCCchhHHHHHHHHCCCCccEEEe
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFPEGINIYFE  127 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~--~i~~~~~~~~~~~i~~~~~~~~d~v~d  127 (241)
                      .+.+|+|+|+ |.+|.++++.+...|+ +|+++.++.++.+.+.++++...  +.+..   +..+.+     ..+|+||.
T Consensus       265 ~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~---dl~~al-----~~aDVVIs  335 (519)
T PLN00203        265 ASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPLD---EMLACA-----AEADVVFT  335 (519)
T ss_pred             CCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecHh---hHHHHH-----hcCCEEEE
Confidence            3678999996 9999999999999998 89999999888877775664211  11111   222222     25999999


Q ss_pred             CCCc
Q 026217          128 NVGG  131 (241)
Q Consensus       128 ~~g~  131 (241)
                      |++.
T Consensus       336 AT~s  339 (519)
T PLN00203        336 STSS  339 (519)
T ss_pred             ccCC
Confidence            9985

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.67  E-value=0.0084  Score=43.20  Aligned_cols=81  Identities=19%  Similarity=0.215  Sum_probs=57.4

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHHHcCCCeeecCCCc---hhHHHHHHHHCC--CCcc
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK-VDLLKNKFGFDEAFNYKEE---PDLDAALKRYFP--EGIN  123 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~-~~~~~~~~g~~~~i~~~~~---~~~~~~i~~~~~--~~~d  123 (241)
                      .+|-.-+|+|+.+++|.++...+...|+.|+..+-..++ .+.++ ++|-..++...+-   .+....+....+  |..|
T Consensus         7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vak-elg~~~vf~padvtsekdv~aala~ak~kfgrld   85 (260)
T KOG1199|consen    7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAK-ELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLD   85 (260)
T ss_pred             hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHH-HhCCceEEeccccCcHHHHHHHHHHHHhhcccee
Confidence            355667999999999999999999999999988866654 45555 9987655543321   133333333322  3799


Q ss_pred             EEEeCCCc
Q 026217          124 IYFENVGG  131 (241)
Q Consensus       124 ~v~d~~g~  131 (241)
                      ..++|.|-
T Consensus        86 ~~vncagi   93 (260)
T KOG1199|consen   86 ALVNCAGI   93 (260)
T ss_pred             eeeeccce
Confidence            99999984

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=96.64  E-value=0.0074  Score=49.38  Aligned_cols=35  Identities=17%  Similarity=0.285  Sum_probs=31.3

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD   87 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~   87 (241)
                      .+|||+||+|.+|..+++.+...|.+|++++++++
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~   35 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSS   35 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCc
Confidence            37999999999999999999999999999987653

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=96.64  E-value=0.016  Score=44.98  Aligned_cols=81  Identities=21%  Similarity=0.251  Sum_probs=50.4

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHHcC----CC-e--eecCCC-chhHHHHHHHHC--
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK--VDLLKNKFG----FD-E--AFNYKE-EPDLDAALKRYF--  118 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~--~~~~~~~~g----~~-~--~i~~~~-~~~~~~~i~~~~--  118 (241)
                      .+..++|+||++++|++++..+...|++|+++.++.+.  .+.+.+...    .. .  ..|..+ .......+....  
T Consensus         4 ~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~~   83 (251)
T COG1028           4 SGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEEE   83 (251)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHHH
Confidence            56789999999999999888888999998888876543  333331222    11 1  134443 212222222222  


Q ss_pred             CCCccEEEeCCCc
Q 026217          119 PEGINIYFENVGG  131 (241)
Q Consensus       119 ~~~~d~v~d~~g~  131 (241)
                      -|++|++++++|.
T Consensus        84 ~g~id~lvnnAg~   96 (251)
T COG1028          84 FGRIDILVNNAGI   96 (251)
T ss_pred             cCCCCEEEECCCC
Confidence            1369999999983

>PRK13255 thiopurine S-methyltransferase; Reviewed

Probab=96.62  E-value=0.02  Score=43.65  Aligned_cols=101  Identities=13%  Similarity=0.062  Sum_probs=63.4

Q ss_pred             CCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeee---------cCCCchh-HHHHHHHH
Q 026217           48 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAF---------NYKEEPD-LDAALKRY  117 (241)
Q Consensus        48 ~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i---------~~~~~~~-~~~~i~~~  117 (241)
                      .+.++.+||+.|  .|.|.-++-||. .|++|++++.++...+.+.++.+.....         ....- . +...+.+.
T Consensus        34 ~~~~~~rvL~~g--CG~G~da~~LA~-~G~~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v-~~~~~D~~~l  109 (218)
T PRK13255         34 ALPAGSRVLVPL--CGKSLDMLWLAE-QGHEVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEI-TIYCGDFFAL  109 (218)
T ss_pred             CCCCCCeEEEeC--CCChHhHHHHHh-CCCeEEEEccCHHHHHHHHHHcCCCccccccccccccccCce-EEEECcccCC
Confidence            445778999998  677888888875 7999999999999888764344432100         00000 0 00011111


Q ss_pred             ---CCCCccEEEeCCC---------chhHHHHHHhhccCCEEEEEee
Q 026217          118 ---FPEGINIYFENVG---------GKMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       118 ---~~~~~d~v~d~~g---------~~~~~~~~~~l~~~G~~v~~g~  152 (241)
                         ..+.||.|+|...         ...+..+.++|+++|++..+..
T Consensus       110 ~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~~~  156 (218)
T PRK13255        110 TAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLVTL  156 (218)
T ss_pred             CcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEEEE
Confidence               1136899998663         1357888899999997655443

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=96.62  E-value=0.013  Score=48.13  Aligned_cols=49  Identities=16%  Similarity=0.146  Sum_probs=38.7

Q ss_pred             HHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 026217           37 MTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK   86 (241)
Q Consensus        37 ~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~   86 (241)
                      +|||.-+.... +-+..+|+|+||+|-+|..++..+...|.+|+++++..
T Consensus         1 ~~~~~~~~~~~-~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~   49 (348)
T PRK15181          1 MTAYEELRTKL-VLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFS   49 (348)
T ss_pred             Cchhhhhhhcc-cccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCC
Confidence            36776664333 33457899999999999999999999999999998754

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.62  E-value=0.14  Score=41.52  Aligned_cols=40  Identities=18%  Similarity=0.043  Sum_probs=34.0

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK   93 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~   93 (241)
                      .+|.|+|+ |.+|...++.+...|.+|++.+.+++..+.++
T Consensus         8 ~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~   47 (321)
T PRK07066          8 KTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAALR   47 (321)
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHH
Confidence            57999996 99999988888889999999999887665543

>PLN02244 tocopherol O-methyltransferase

Probab=96.62  E-value=0.012  Score=48.12  Aligned_cols=98  Identities=14%  Similarity=0.161  Sum_probs=64.4

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCCeeecCCCchhHHHHHHHHCCCCccEEE
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRYFPEGINIYF  126 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~---~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~  126 (241)
                      +++++||=+|  .|.|..+..+++..|++|++++.++...+.+++.   .|...-+..... +..+ + ...++.||+|+
T Consensus       117 ~~~~~VLDiG--CG~G~~~~~La~~~g~~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~-D~~~-~-~~~~~~FD~V~  191 (340)
T PLN02244        117 KRPKRIVDVG--CGIGGSSRYLARKYGANVKGITLSPVQAARANALAAAQGLSDKVSFQVA-DALN-Q-PFEDGQFDLVW  191 (340)
T ss_pred             CCCCeEEEec--CCCCHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEc-Cccc-C-CCCCCCccEEE
Confidence            6788999888  5677788888988899999999999877766622   232110111110 1110 0 11234799998


Q ss_pred             eCCCc-------hhHHHHHHhhccCCEEEEEee
Q 026217          127 ENVGG-------KMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       127 d~~g~-------~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      .....       ..+..+.++|++||+++....
T Consensus       192 s~~~~~h~~d~~~~l~e~~rvLkpGG~lvi~~~  224 (340)
T PLN02244        192 SMESGEHMPDKRKFVQELARVAAPGGRIIIVTW  224 (340)
T ss_pred             ECCchhccCCHHHHHHHHHHHcCCCcEEEEEEe
Confidence            64331       356788899999999998754

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=96.61  E-value=0.02  Score=47.21  Aligned_cols=79  Identities=14%  Similarity=0.100  Sum_probs=48.7

Q ss_pred             CCCcEEEEEcCCchHHHH--HHHHHHHcCCEEEEEeCCH--HH--------------HHHHHHHcCCC-ee--ecCCCch
Q 026217           50 KQGEYVFVSAASGAVGQL--VGQFAKLVGCYVVGSAGSK--DK--------------VDLLKNKFGFD-EA--FNYKEEP  108 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~--avqla~~~g~~v~~~~~~~--~~--------------~~~~~~~~g~~-~~--i~~~~~~  108 (241)
                      ..+.++||+|+++++|++  .++.+ ..|++++++....  .+              .+.++ +.|.. ..  .|-.+.+
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~-~~G~~a~~i~~DVss~E  116 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAK-AAGLYAKSINGDAFSDE  116 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHH-hcCCceEEEEcCCCCHH
Confidence            345799999999999999  55556 8899888887322  11              22334 55643 12  2333321


Q ss_pred             h---HHHHHHHHCCCCccEEEeCCCc
Q 026217          109 D---LDAALKRYFPEGINIYFENVGG  131 (241)
Q Consensus       109 ~---~~~~i~~~~~~~~d~v~d~~g~  131 (241)
                      .   +.+.+.+.. |++|+++++++.
T Consensus       117 ~v~~lie~I~e~~-G~IDiLVnSaA~  141 (398)
T PRK13656        117 IKQKVIELIKQDL-GQVDLVVYSLAS  141 (398)
T ss_pred             HHHHHHHHHHHhc-CCCCEEEECCcc
Confidence            2   333333332 479999999984

>PRK04457 spermidine synthase; Provisional

Probab=96.60  E-value=0.048  Score=42.89  Aligned_cols=97  Identities=10%  Similarity=0.122  Sum_probs=65.1

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHcCCC---eeecCCCchhHHHHHHHHCCCCccEE
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEPDLDAALKRYFPEGINIY  125 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~-g~~v~~~~~~~~~~~~~~~~~g~~---~~i~~~~~~~~~~~i~~~~~~~~d~v  125 (241)
                      .+..+||+.|  +|.|..+..+++.. +.+|+++..+++-.+.+++.++..   .-+..... +..+.+... ++.+|+|
T Consensus        65 ~~~~~vL~IG--~G~G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~~-Da~~~l~~~-~~~yD~I  140 (262)
T PRK04457         65 PRPQHILQIG--LGGGSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIEA-DGAEYIAVH-RHSTDVI  140 (262)
T ss_pred             CCCCEEEEEC--CCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEEC-CHHHHHHhC-CCCCCEE
Confidence            4567899999  45688888888887 569999999999999998555532   10111111 444444432 3479988


Q ss_pred             E-eCCC----------chhHHHHHHhhccCCEEEEE
Q 026217          126 F-ENVG----------GKMLDAVLLNMRIQGRITLC  150 (241)
Q Consensus       126 ~-d~~g----------~~~~~~~~~~l~~~G~~v~~  150 (241)
                      + |...          .+.+..+.++|+++|.++.-
T Consensus       141 ~~D~~~~~~~~~~l~t~efl~~~~~~L~pgGvlvin  176 (262)
T PRK04457        141 LVDGFDGEGIIDALCTQPFFDDCRNALSSDGIFVVN  176 (262)
T ss_pred             EEeCCCCCCCccccCcHHHHHHHHHhcCCCcEEEEE
Confidence            6 3321          24578888999999999873

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.59  E-value=0.016  Score=43.66  Aligned_cols=91  Identities=10%  Similarity=0.003  Sum_probs=53.3

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK-DKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV  129 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~-~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~  129 (241)
                      .|.+|+|.|| |.+|...++.+...|++|+++.... +....+. .-+.- .+..+.. . ...+     .++|+|+-++
T Consensus         9 ~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~-~~~~i-~~~~~~~-~-~~~l-----~~adlViaaT   78 (202)
T PRK06718          9 SNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVKLV-EEGKI-RWKQKEF-E-PSDI-----VDAFLVIAAT   78 (202)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHH-hCCCE-EEEecCC-C-hhhc-----CCceEEEEcC
Confidence            5678999997 9999999988888999998887432 1222222 11211 1111110 0 1111     2699999999


Q ss_pred             CchhHHHHHHhhccCCEEEEEe
Q 026217          130 GGKMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       130 g~~~~~~~~~~l~~~G~~v~~g  151 (241)
                      +.+..+.........+.++.+.
T Consensus        79 ~d~elN~~i~~~a~~~~lvn~~  100 (202)
T PRK06718         79 NDPRVNEQVKEDLPENALFNVI  100 (202)
T ss_pred             CCHHHHHHHHHHHHhCCcEEEC
Confidence            9755444433333445666553

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=96.56  E-value=0.0021  Score=51.04  Aligned_cols=67  Identities=19%  Similarity=0.191  Sum_probs=45.2

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCc
Q 026217           55 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG  131 (241)
Q Consensus        55 vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~  131 (241)
                      |||+||+|.+|..+++.+...|.+|+++++++++.+... ..+..   +.... ...+.+     .++|+|+.+++.
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~---~~~~~-~~~~~~-----~~~D~Vvh~a~~   67 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK-WEGYK---PWAPL-AESEAL-----EGADAVINLAGE   67 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc-ceeee---ccccc-chhhhc-----CCCCEEEECCCC
Confidence            689999999999999998889999999998876544322 12211   11111 221111     269999999973

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=96.55  E-value=0.006  Score=49.34  Aligned_cols=71  Identities=20%  Similarity=0.209  Sum_probs=48.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe-eecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      +|+|+||+|.+|..+++.+...|.+|+++++++++...+. ..+... ..|..+.    +.+.+... ++|+|+++++
T Consensus         2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~~~----~~l~~~~~-~~d~vi~~a~   73 (328)
T TIGR03466         2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLE-GLDVEIVEGDLRDP----ASLRKAVA-GCRALFHVAA   73 (328)
T ss_pred             eEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccc-cCCceEEEeeCCCH----HHHHHHHh-CCCEEEEece
Confidence            5899999999999999999899999999998766544333 334332 2233332    12222222 4899999875

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=96.54  E-value=0.012  Score=52.59  Aligned_cols=77  Identities=12%  Similarity=0.072  Sum_probs=48.2

Q ss_pred             CCCCcEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHc-CCCe-eecCCCchhHHHHHHHHCCCCccEE
Q 026217           49 PKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKF-GFDE-AFNYKEEPDLDAALKRYFPEGINIY  125 (241)
Q Consensus        49 ~~~~~~vlI~ga~g~~G~~avqla~~~-g~~v~~~~~~~~~~~~~~~~~-g~~~-~i~~~~~~~~~~~i~~~~~~~~d~v  125 (241)
                      .+++.+|||+||+|-+|..+++.+... |.+|+++++.+....... .. +... .-|..+.   ...+.+... ++|+|
T Consensus       312 ~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~-~~~~~~~~~gDl~d~---~~~l~~~l~-~~D~V  386 (660)
T PRK08125        312 AKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFL-GHPRFHFVEGDISIH---SEWIEYHIK-KCDVV  386 (660)
T ss_pred             hhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhc-CCCceEEEeccccCc---HHHHHHHhc-CCCEE
Confidence            356778999999999999999888775 789999998765433222 11 1111 1122221   111222222 59999


Q ss_pred             EeCCC
Q 026217          126 FENVG  130 (241)
Q Consensus       126 ~d~~g  130 (241)
                      |.+++
T Consensus       387 iHlAa  391 (660)
T PRK08125        387 LPLVA  391 (660)
T ss_pred             EECcc
Confidence            99876

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=96.54  E-value=0.016  Score=44.55  Aligned_cols=77  Identities=18%  Similarity=0.256  Sum_probs=47.5

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHH---HcCCC---eeecCCCchhHHHHHHHHC--CCCccEE
Q 026217           55 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK-DKVDLLKN---KFGFD---EAFNYKEEPDLDAALKRYF--PEGINIY  125 (241)
Q Consensus        55 vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~-~~~~~~~~---~~g~~---~~i~~~~~~~~~~~i~~~~--~~~~d~v  125 (241)
                      ++|+|++|++|...++.+...|++|++++++. ++.+...+   ..+..   ...|..+...+...+....  -+++|.+
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL   80 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            58999999999999999888899999998764 33222211   33421   1234444312222222221  1369999


Q ss_pred             EeCCCc
Q 026217          126 FENVGG  131 (241)
Q Consensus       126 ~d~~g~  131 (241)
                      +.+.|.
T Consensus        81 i~~ag~   86 (239)
T TIGR01830        81 VNNAGI   86 (239)
T ss_pred             EECCCC
Confidence            998883

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PLN02214 cinnamoyl-CoA reductase

Probab=96.54  E-value=0.02  Score=46.88  Aligned_cols=38  Identities=24%  Similarity=0.324  Sum_probs=33.7

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK   88 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~   88 (241)
                      ++.+|+|+||+|.+|...++.+...|.+|++++++.++
T Consensus         9 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~   46 (342)
T PLN02214          9 AGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDD   46 (342)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchh
Confidence            56789999999999999999999999999999987653

>PRK14967 putative methyltransferase; Provisional

Probab=96.53  E-value=0.1  Score=39.97  Aligned_cols=96  Identities=20%  Similarity=0.166  Sum_probs=63.0

Q ss_pred             cCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH---cCCC-eeecCCCchhHHHHHHHHCCCC
Q 026217           47 CSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNK---FGFD-EAFNYKEEPDLDAALKRYFPEG  121 (241)
Q Consensus        47 ~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~---~g~~-~~i~~~~~~~~~~~i~~~~~~~  121 (241)
                      ..++++++||-.|. |. |..++.+++. +. +|++++.++...+.+++.   .+.. .+++   . ++.+.+   .++.
T Consensus        32 ~~~~~~~~vLDlGc-G~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~---~-d~~~~~---~~~~  101 (223)
T PRK14967         32 EGLGPGRRVLDLCT-GS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRR---G-DWARAV---EFRP  101 (223)
T ss_pred             cccCCCCeEEEecC-CH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEE---C-chhhhc---cCCC
Confidence            45788999999993 54 8888888875 55 999999999887766632   3332 1222   1 333222   2247


Q ss_pred             ccEEEeCCC---c-------------------------hhHHHHHHhhccCCEEEEEee
Q 026217          122 INIYFENVG---G-------------------------KMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       122 ~d~v~d~~g---~-------------------------~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      ||+|+....   .                         ..+..+.+.|+++|+++.+..
T Consensus       102 fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~~~  160 (223)
T PRK14967        102 FDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLVQS  160 (223)
T ss_pred             eeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence            999986421   0                         123567789999999987643

>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional

Probab=96.50  E-value=0.069  Score=41.81  Aligned_cols=94  Identities=16%  Similarity=0.191  Sum_probs=62.9

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC---eeecCCCchhHHHHHHHHCCCCcc
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEPDLDAALKRYFPEGIN  123 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~~i~~~~~~~~~~~i~~~~~~~~d  123 (241)
                      .++.+||-.|  +|.|..+..+++. |.+|++++.+++..+.+++..   |..   .++..    +.. .+....++.+|
T Consensus        43 ~~~~~vLDiG--cG~G~~a~~la~~-g~~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~----d~~-~l~~~~~~~fD  114 (255)
T PRK11036         43 PRPLRVLDAG--GGEGQTAIKLAEL-GHQVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHC----AAQ-DIAQHLETPVD  114 (255)
T ss_pred             CCCCEEEEeC--CCchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCccceEEEEc----CHH-HHhhhcCCCCC
Confidence            4567888888  6778888888875 889999999999888877332   321   12211    222 22222334799


Q ss_pred             EEEeCCC-----c--hhHHHHHHhhccCCEEEEEe
Q 026217          124 IYFENVG-----G--KMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       124 ~v~d~~g-----~--~~~~~~~~~l~~~G~~v~~g  151 (241)
                      +|+....     .  ..+..+.+.|+++|.++.+-
T Consensus       115 ~V~~~~vl~~~~~~~~~l~~~~~~LkpgG~l~i~~  149 (255)
T PRK11036        115 LILFHAVLEWVADPKSVLQTLWSVLRPGGALSLMF  149 (255)
T ss_pred             EEEehhHHHhhCCHHHHHHHHHHHcCCCeEEEEEE
Confidence            9985432     1  35778899999999998653

>TIGR00477 tehB tellurite resistance protein TehB

Probab=96.50  E-value=0.015  Score=43.58  Aligned_cols=99  Identities=11%  Similarity=0.060  Sum_probs=60.9

Q ss_pred             HhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCCeeecCCCchhHHHHHHHHCCCC
Q 026217           45 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRYFPEG  121 (241)
Q Consensus        45 ~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~---~g~~~~i~~~~~~~~~~~i~~~~~~~  121 (241)
                      ......++.+||-.|  .|.|..+..+++ .|.+|++++.++.-.+.+++.   .+..  +..... ++.. . .. ++.
T Consensus        24 ~~~~~~~~~~vLDiG--cG~G~~a~~la~-~g~~V~~iD~s~~~l~~a~~~~~~~~~~--v~~~~~-d~~~-~-~~-~~~   94 (195)
T TIGR00477        24 EAVKTVAPCKTLDLG--CGQGRNSLYLSL-AGYDVRAWDHNPASIASVLDMKARENLP--LRTDAY-DINA-A-AL-NED   94 (195)
T ss_pred             HHhccCCCCcEEEeC--CCCCHHHHHHHH-CCCeEEEEECCHHHHHHHHHHHHHhCCC--ceeEec-cchh-c-cc-cCC
Confidence            334445567899888  577877777776 488999999998877766522   2222  111111 1110 0 11 236


Q ss_pred             ccEEEeCCC---------chhHHHHHHhhccCCEEEEEee
Q 026217          122 INIYFENVG---------GKMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       122 ~d~v~d~~g---------~~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      +|+|+.+..         ...+..+.+.|+++|.++.+..
T Consensus        95 fD~I~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lli~~~  134 (195)
T TIGR00477        95 YDFIFSTVVFMFLQAGRVPEIIANMQAHTRPGGYNLIVAA  134 (195)
T ss_pred             CCEEEEecccccCCHHHHHHHHHHHHHHhCCCcEEEEEEe
Confidence            999876421         1356778889999999666543

Part of a tellurite-reducing operon tehA and tehB

>PRK01581 speE spermidine synthase; Validated

Probab=96.48  E-value=0.2  Score=41.08  Aligned_cols=97  Identities=10%  Similarity=0.087  Sum_probs=61.2

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcC-CC----eee-cCC----CchhHHHHHHHHC
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFG-FD----EAF-NYK----EEPDLDAALKRYF  118 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~g-~~----~~i-~~~----~~~~~~~~i~~~~  118 (241)
                      ....+|||.|  ||.|.++..++++.+. +|+++..+++-.+.++ ++. ..    ..+ +.+    .. |..+-+.. .
T Consensus       149 ~~PkrVLIIG--gGdG~tlrelLk~~~v~~It~VEIDpeVIelAr-~~~~L~~~~~~~~~DpRV~vvi~-Da~~fL~~-~  223 (374)
T PRK01581        149 IDPKRVLILG--GGDGLALREVLKYETVLHVDLVDLDGSMINMAR-NVPELVSLNKSAFFDNRVNVHVC-DAKEFLSS-P  223 (374)
T ss_pred             CCCCEEEEEC--CCHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH-hccccchhccccCCCCceEEEEC-cHHHHHHh-c
Confidence            3446899999  5677777777776654 9999999988888888 421 10    000 011    11 33333433 3


Q ss_pred             CCCccEEEeCC----C--------chhHHHHHHhhccCCEEEEEe
Q 026217          119 PEGINIYFENV----G--------GKMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       119 ~~~~d~v~d~~----g--------~~~~~~~~~~l~~~G~~v~~g  151 (241)
                      ++.+|+|+--.    +        .+.+..+.+.|+++|.++.-.
T Consensus       224 ~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Qs  268 (374)
T PRK01581        224 SSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQS  268 (374)
T ss_pred             CCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEec
Confidence            34799886332    1        125678889999999987753

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=96.48  E-value=0.01  Score=47.72  Aligned_cols=73  Identities=14%  Similarity=0.094  Sum_probs=44.6

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCCeee-cCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           55 VFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAF-NYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        55 vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~i-~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      |||+||+|.+|..+++.+...|. .|+++.++..... +. .++...+. +..+. +..+.+.+..-.++|+|+.+++
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~-~~-~~~~~~~~~d~~~~-~~~~~~~~~~~~~~D~vvh~A~   75 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGHK-FL-NLADLVIADYIDKE-DFLDRLEKGAFGKIEAIFHQGA   75 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCchh-hh-hhhheeeeccCcch-hHHHHHHhhccCCCCEEEECcc
Confidence            68999999999999999999998 7888775433221 22 22211111 22222 3333333211137999999986

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PRK10258 biotin biosynthesis protein BioC; Provisional

Probab=96.47  E-value=0.29  Score=38.17  Aligned_cols=96  Identities=15%  Similarity=0.185  Sum_probs=61.3

Q ss_pred             CCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEe
Q 026217           48 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFE  127 (241)
Q Consensus        48 ~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d  127 (241)
                      ...++.+||-.|. | .|..+..+++ .|.+|++++.+++..+.+++.......+..    +... + ...++.+|+|+.
T Consensus        39 ~~~~~~~vLDiGc-G-~G~~~~~l~~-~~~~v~~~D~s~~~l~~a~~~~~~~~~~~~----d~~~-~-~~~~~~fD~V~s  109 (251)
T PRK10258         39 PQRKFTHVLDAGC-G-PGWMSRYWRE-RGSQVTALDLSPPMLAQARQKDAADHYLAG----DIES-L-PLATATFDLAWS  109 (251)
T ss_pred             CccCCCeEEEeeC-C-CCHHHHHHHH-cCCeEEEEECCHHHHHHHHhhCCCCCEEEc----Cccc-C-cCCCCcEEEEEE
Confidence            3446788999983 3 3665555554 578999999999999888833322222211    1111 1 112237999986


Q ss_pred             CCC-------chhHHHHHHhhccCCEEEEEee
Q 026217          128 NVG-------GKMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       128 ~~g-------~~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      ...       ...+..+.++|+++|.++....
T Consensus       110 ~~~l~~~~d~~~~l~~~~~~Lk~gG~l~~~~~  141 (251)
T PRK10258        110 NLAVQWCGNLSTALRELYRVVRPGGVVAFTTL  141 (251)
T ss_pred             CchhhhcCCHHHHHHHHHHHcCCCeEEEEEeC
Confidence            543       1357788889999999987644

>PLN02650 dihydroflavonol-4-reductase

Probab=96.46  E-value=0.022  Score=46.71  Aligned_cols=42  Identities=26%  Similarity=0.211  Sum_probs=35.0

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLL   92 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~   92 (241)
                      ...+|||+||+|.+|...+..+...|.+|++++++.++.+.+
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~   45 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKV   45 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHH
Confidence            346899999999999999999999999999998876554433

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.46  E-value=0.077  Score=38.24  Aligned_cols=86  Identities=8%  Similarity=0.145  Sum_probs=53.7

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHH-HHHHHHCCCCccEEEeCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLD-AALKRYFPEGINIYFENV  129 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~-~~i~~~~~~~~d~v~d~~  129 (241)
                      .|.+|+|.|| |.+|..-++.+...|++|+++.  ++..+.++ +++.-. ...+   .+. ..+     .++|+|+-++
T Consensus        12 ~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIs--p~~~~~l~-~l~~i~-~~~~---~~~~~dl-----~~a~lViaaT   78 (157)
T PRK06719         12 HNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVS--PEICKEMK-ELPYIT-WKQK---TFSNDDI-----KDAHLIYAAT   78 (157)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc--CccCHHHH-hccCcE-EEec---ccChhcC-----CCceEEEECC
Confidence            5788999997 9999998888888999998884  44445555 443211 1111   111 111     2699999999


Q ss_pred             CchhHHHHHHhhccCCEEEE
Q 026217          130 GGKMLDAVLLNMRIQGRITL  149 (241)
Q Consensus       130 g~~~~~~~~~~l~~~G~~v~  149 (241)
                      +.+..+.........+.++.
T Consensus        79 ~d~e~N~~i~~~a~~~~~vn   98 (157)
T PRK06719         79 NQHAVNMMVKQAAHDFQWVN   98 (157)
T ss_pred             CCHHHHHHHHHHHHHCCcEE
Confidence            97655544443433333444

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.43  E-value=0.0057  Score=40.70  Aligned_cols=86  Identities=16%  Similarity=0.276  Sum_probs=56.9

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      .|.+|||.|+ |.+|..-++.+...|++|++++...   +..+   +.-..   ... .+...+     .++++|+-+++
T Consensus         6 ~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~---~~~~---~~i~~---~~~-~~~~~l-----~~~~lV~~at~   69 (103)
T PF13241_consen    6 KGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI---EFSE---GLIQL---IRR-EFEEDL-----DGADLVFAATD   69 (103)
T ss_dssp             TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE---HHHH---TSCEE---EES-S-GGGC-----TTESEEEE-SS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch---hhhh---hHHHH---Hhh-hHHHHH-----hhheEEEecCC
Confidence            5778999996 9999999999999999999999764   2222   21111   111 231111     26999999998


Q ss_pred             ch-hHHHHHHhhccCCEEEEEee
Q 026217          131 GK-MLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       131 ~~-~~~~~~~~l~~~G~~v~~g~  152 (241)
                      .. ....+.+..+..|.++.+..
T Consensus        70 d~~~n~~i~~~a~~~~i~vn~~D   92 (103)
T PF13241_consen   70 DPELNEAIYADARARGILVNVVD   92 (103)
T ss_dssp             -HHHHHHHHHHHHHTTSEEEETT
T ss_pred             CHHHHHHHHHHHhhCCEEEEECC
Confidence            64 44566666677899988754

>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated

Probab=96.43  E-value=0.15  Score=37.86  Aligned_cols=98  Identities=15%  Similarity=0.206  Sum_probs=63.5

Q ss_pred             HhcCCCCCcEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHH---cCCCeeecCCCchhHHHHHHHHCCC
Q 026217           45 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRYFPE  120 (241)
Q Consensus        45 ~~~~~~~~~~vlI~ga~g~~G~~avqla~~~-g~~v~~~~~~~~~~~~~~~~---~g~~~~i~~~~~~~~~~~i~~~~~~  120 (241)
                      ....+.++++||=.|  .|.|..++.+++.. +.+|++++.+++..+.+++.   ++...+ ..... +....    ..+
T Consensus        25 ~~l~~~~~~~vLDiG--~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i-~~~~~-d~~~~----~~~   96 (187)
T PRK08287         25 SKLELHRAKHLIDVG--AGTGSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNI-DIIPG-EAPIE----LPG   96 (187)
T ss_pred             HhcCCCCCCEEEEEC--CcCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCe-EEEec-Cchhh----cCc
Confidence            445677889999888  45577778888776 46999999999887777632   333221 11111 22111    123


Q ss_pred             CccEEEeCCC----chhHHHHHHhhccCCEEEEE
Q 026217          121 GINIYFENVG----GKMLDAVLLNMRIQGRITLC  150 (241)
Q Consensus       121 ~~d~v~d~~g----~~~~~~~~~~l~~~G~~v~~  150 (241)
                      .+|+|+....    ...+..+.+.|+++|+++..
T Consensus        97 ~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~lv~~  130 (187)
T PRK08287         97 KADAIFIGGSGGNLTAIIDWSLAHLHPGGRLVLT  130 (187)
T ss_pred             CCCEEEECCCccCHHHHHHHHHHhcCCCeEEEEE
Confidence            6999985432    13567788899999998764

>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]

Probab=96.42  E-value=0.095  Score=41.53  Aligned_cols=149  Identities=15%  Similarity=0.090  Sum_probs=94.1

Q ss_pred             CCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCc----------hhHHHHHHHH
Q 026217           48 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEE----------PDLDAALKRY  117 (241)
Q Consensus        48 ~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~----------~~~~~~i~~~  117 (241)
                      .-.++..+++.|+ |-.|++++-.++..|+-|......+.+.+..+ ++|+...-..+++          .++..+-.+.
T Consensus       160 gtv~pA~vlv~G~-Gvagl~aiata~~lG~iVt~rdlrm~~Keqv~-s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~  237 (356)
T COG3288         160 GTVSPAKVLVIGA-GVAGLAAIATAVRLGAIVTARDLRMFKKEQVE-SLGAKFLAVEDEESAGGYAKEMSEEFIAKQAEL  237 (356)
T ss_pred             ccccchhhhhhhH-HHHHHHHHHHHhhcceEEehhhhhhHHhhhhh-hcccccccccccccCCCccccCCHHHHHHHHHH
Confidence            3345667899996 99999999999999999999998888888887 8887422111110          0222111111


Q ss_pred             -CC--CCccEEEeCCC--c-h----hHHHHHHhhccCCEEEEEeeecccCCCCCCCccChHHHhhcceEEEEeecccc--
Q 026217          118 -FP--EGINIYFENVG--G-K----MLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY--  185 (241)
Q Consensus       118 -~~--~~~d~v~d~~g--~-~----~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  185 (241)
                       ..  .++|+|+-+.-  + +    ....+.+.++||+.++.+....+.|.+..   .+..-...++.++.|...-.-  
T Consensus       238 ~a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~~GGNce~t---~pg~~v~~~gV~iig~~nlp~r~  314 (356)
T COG3288         238 VAEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAETGGNCELT---EPGKVVTKNGVKIIGYTNLPGRL  314 (356)
T ss_pred             HHHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhhcCCCcccc---cCCeEEEeCCeEEEeecCcchhh
Confidence             11  27999998773  2 1    34678889999999999876555444332   222344567788888664321  


Q ss_pred             ----cchhHHHHHHHHHHHH
Q 026217          186 ----FHLYPKFLEMMIPRIK  201 (241)
Q Consensus       186 ----~~~~~~~~~~~~~~~~  201 (241)
                          ...|.+.+..+++++-
T Consensus       315 a~~aS~LYa~Nl~~~l~ll~  334 (356)
T COG3288         315 AAQASQLYATNLVNLLKLLC  334 (356)
T ss_pred             hhhHHHHHHHHHHHHHHHHh
Confidence                2334445555555553

>PLN02233 ubiquinone biosynthesis methyltransferase

Probab=96.42  E-value=0.057  Score=42.44  Aligned_cols=99  Identities=15%  Similarity=0.166  Sum_probs=65.2

Q ss_pred             hcCCCCCcEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHcC------CCe--eecCCCchhHHHHHH
Q 026217           46 VCSPKQGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKNKFG------FDE--AFNYKEEPDLDAALK  115 (241)
Q Consensus        46 ~~~~~~~~~vlI~ga~g~~G~~avqla~~~g--~~v~~~~~~~~~~~~~~~~~g------~~~--~i~~~~~~~~~~~i~  115 (241)
                      ...+.++++||-.|  .|.|..+..+++..+  .+|++++.+++-.+.+++...      .+.  .+..    +.. .+ 
T Consensus        68 ~~~~~~~~~VLDlG--cGtG~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~----d~~-~l-  139 (261)
T PLN02233         68 WSGAKMGDRVLDLC--CGSGDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEG----DAT-DL-  139 (261)
T ss_pred             HhCCCCCCEEEEEC--CcCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEc----ccc-cC-
Confidence            34678899999998  455667777887765  499999999998888863322      111  1111    110 11 


Q ss_pred             HHCCCCccEEEeCCC-------chhHHHHHHhhccCCEEEEEee
Q 026217          116 RYFPEGINIYFENVG-------GKMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       116 ~~~~~~~d~v~d~~g-------~~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      ...++.+|.|+-..+       ...+..+.+.|+|+|+++.+..
T Consensus       140 p~~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpGG~l~i~d~  183 (261)
T PLN02233        140 PFDDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPGSRVSILDF  183 (261)
T ss_pred             CCCCCCEeEEEEecccccCCCHHHHHHHHHHHcCcCcEEEEEEC
Confidence            112237999875433       1357889999999999988755

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=96.41  E-value=0.016  Score=49.54  Aligned_cols=76  Identities=13%  Similarity=0.187  Sum_probs=51.2

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCC----Ce----eecCCCchhHHHHHHHHCCC-
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGF----DE----AFNYKEEPDLDAALKRYFPE-  120 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~g~----~~----~i~~~~~~~~~~~i~~~~~~-  120 (241)
                      .|.+|||+||+|++|...+.-....+. +++..++++.++..+.+++..    ..    +-|-++.    +.+.....+ 
T Consensus       249 ~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~----~~~~~~~~~~  324 (588)
T COG1086         249 TGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDR----DRVERAMEGH  324 (588)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccH----HHHHHHHhcC
Confidence            578999999999999876666555676 899999888776555544432    21    2233332    233333334 


Q ss_pred             CccEEEeCCC
Q 026217          121 GINIYFENVG  130 (241)
Q Consensus       121 ~~d~v~d~~g  130 (241)
                      ++|+||.++.
T Consensus       325 kvd~VfHAAA  334 (588)
T COG1086         325 KVDIVFHAAA  334 (588)
T ss_pred             CCceEEEhhh
Confidence            7999999875

>PRK01683 trans-aconitate 2-methyltransferase; Provisional

Probab=96.40  E-value=0.069  Score=41.81  Aligned_cols=97  Identities=10%  Similarity=0.150  Sum_probs=66.1

Q ss_pred             HhcCCCCCcEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCcc
Q 026217           45 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGIN  123 (241)
Q Consensus        45 ~~~~~~~~~~vlI~ga~g~~G~~avqla~~~-g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d  123 (241)
                      ....+.++++||=+|  .|.|..+..+++.. +.+|++++.+++-.+.+++.+....++..    +... .  ...+.+|
T Consensus        25 ~~~~~~~~~~vLDiG--cG~G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~----d~~~-~--~~~~~fD   95 (258)
T PRK01683         25 ARVPLENPRYVVDLG--CGPGNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEA----DIAS-W--QPPQALD   95 (258)
T ss_pred             hhCCCcCCCEEEEEc--ccCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEEC----chhc-c--CCCCCcc
Confidence            335667889999998  56778888888877 56999999999988888844322122211    2211 1  1123799


Q ss_pred             EEEeCCC-----c--hhHHHHHHhhccCCEEEEE
Q 026217          124 IYFENVG-----G--KMLDAVLLNMRIQGRITLC  150 (241)
Q Consensus       124 ~v~d~~g-----~--~~~~~~~~~l~~~G~~v~~  150 (241)
                      +|+....     .  ..+..+.++|+++|.++..
T Consensus        96 ~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~~~~~  129 (258)
T PRK01683         96 LIFANASLQWLPDHLELFPRLVSLLAPGGVLAVQ  129 (258)
T ss_pred             EEEEccChhhCCCHHHHHHHHHHhcCCCcEEEEE
Confidence            9976543     1  3577888899999998875

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=96.38  E-value=0.015  Score=46.92  Aligned_cols=37  Identities=22%  Similarity=0.285  Sum_probs=32.6

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK   88 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~   88 (241)
                      +.+|||+||+|.+|...+..+...|.+|++++++...
T Consensus         4 ~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~   40 (322)
T PLN02662          4 GKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPND   40 (322)
T ss_pred             CCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCc
Confidence            5689999999999999999999999999998876543

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.38  E-value=0.045  Score=43.68  Aligned_cols=77  Identities=12%  Similarity=0.123  Sum_probs=45.8

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCH---HHHHHHHHHcCCCe--eecCCCchhHHHHHHHHCCCCccE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSK---DKVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFPEGINI  124 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~---~~~~~~~~~~g~~~--~i~~~~~~~~~~~i~~~~~~~~d~  124 (241)
                      ++.+++|.|| |+.+.+++..+...|+ +|+++.|++   ++.+.+.++++...  .+..... +-.+.+.+. -..+|+
T Consensus       123 ~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~-~~~~~l~~~-~~~aDi  199 (288)
T PRK12749        123 KGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDL-ADQQAFAEA-LASADI  199 (288)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEech-hhhhhhhhh-cccCCE
Confidence            5678999996 8889887776777888 899999884   35444443554210  0111110 001112211 125899


Q ss_pred             EEeCCC
Q 026217          125 YFENVG  130 (241)
Q Consensus       125 v~d~~g  130 (241)
                      |++|+.
T Consensus       200 vINaTp  205 (288)
T PRK12749        200 LTNGTK  205 (288)
T ss_pred             EEECCC
Confidence            999986

>PLN00198 anthocyanidin reductase; Provisional

Probab=96.38  E-value=0.02  Score=46.67  Aligned_cols=38  Identities=13%  Similarity=0.121  Sum_probs=32.9

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK   88 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~   88 (241)
                      .+.+|+|+||+|.+|...++.+...|.+|++++++.+.
T Consensus         8 ~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~   45 (338)
T PLN00198          8 GKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPEN   45 (338)
T ss_pred             CCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCC
Confidence            36789999999999999999999999999888876543

>PRK08317 hypothetical protein; Provisional

Probab=96.38  E-value=0.033  Score=42.83  Aligned_cols=103  Identities=21%  Similarity=0.313  Sum_probs=66.9

Q ss_pred             HhcCCCCCcEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHc-CCCeeecCCCchhHHHHHHHHCCCC
Q 026217           45 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKNKF-GFDEAFNYKEEPDLDAALKRYFPEG  121 (241)
Q Consensus        45 ~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g--~~v~~~~~~~~~~~~~~~~~-g~~~~i~~~~~~~~~~~i~~~~~~~  121 (241)
                      +...+.++++||..|. | .|..+..++...+  .++++++.+++..+.+++.. .....+..... +... . ....+.
T Consensus        13 ~~~~~~~~~~vLdiG~-G-~G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~-d~~~-~-~~~~~~   87 (241)
T PRK08317         13 ELLAVQPGDRVLDVGC-G-PGNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRG-DADG-L-PFPDGS   87 (241)
T ss_pred             HHcCCCCCCEEEEeCC-C-CCHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEec-cccc-C-CCCCCC
Confidence            5567889999999994 4 4888999998873  59999999999888887331 11111111110 1110 0 112247


Q ss_pred             ccEEEeCCC-------chhHHHHHHhhccCCEEEEEee
Q 026217          122 INIYFENVG-------GKMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       122 ~d~v~d~~g-------~~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      +|+|+....       ...+..+.++|+++|.++....
T Consensus        88 ~D~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  125 (241)
T PRK08317         88 FDAVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLDT  125 (241)
T ss_pred             ceEEEEechhhccCCHHHHHHHHHHHhcCCcEEEEEec
Confidence            898875322       2467888999999999987653

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=96.38  E-value=0.021  Score=43.11  Aligned_cols=77  Identities=18%  Similarity=0.275  Sum_probs=50.6

Q ss_pred             cEEEEEcCCchHHHHHHHHHH-HcCC-EEEEEeCCHHH-HHHHHHHcCC-C---eee--cC-CCc--hhHHHHHHHHCCC
Q 026217           53 EYVFVSAASGAVGQLVGQFAK-LVGC-YVVGSAGSKDK-VDLLKNKFGF-D---EAF--NY-KEE--PDLDAALKRYFPE  120 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~-~~g~-~v~~~~~~~~~-~~~~~~~~g~-~---~~i--~~-~~~--~~~~~~i~~~~~~  120 (241)
                      .+++|+||..|+|+-.++-.. .-|. .++++++++++ .+++. .+.. |   |++  |. +++  ..+.+++.+..+.
T Consensus         4 ksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~-~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~   82 (249)
T KOG1611|consen    4 KSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELA-LKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGS   82 (249)
T ss_pred             ccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHH-HhhccCCceEEEEEecccHHHHHHHHHHHHhhccc
Confidence            349999999999997776655 4588 56677776776 44444 3321 2   232  21 121  1466777777766


Q ss_pred             -CccEEEeCCC
Q 026217          121 -GINIYFENVG  130 (241)
Q Consensus       121 -~~d~v~d~~g  130 (241)
                       |.++.++++|
T Consensus        83 ~GlnlLinNaG   93 (249)
T KOG1611|consen   83 DGLNLLINNAG   93 (249)
T ss_pred             CCceEEEeccc
Confidence             9999999887

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.37  E-value=0.056  Score=42.77  Aligned_cols=94  Identities=17%  Similarity=0.113  Sum_probs=65.0

Q ss_pred             cCchhHHHHHHHHHhcCC-CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhH
Q 026217           32 LGMPGMTAYAGFFEVCSP-KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDL  110 (241)
Q Consensus        32 l~~~~~ta~~~l~~~~~~-~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~  110 (241)
                      +||........+ +..++ -.|.+++|.|.+..+|.-...++...|++|++..+.                    .. ++
T Consensus       138 ~PcTp~aii~lL-~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~--------------------t~-~l  195 (285)
T PRK14189        138 RPCTPYGVMKML-ESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSK--------------------TR-DL  195 (285)
T ss_pred             cCCCHHHHHHHH-HHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCC--------------------CC-CH
Confidence            455544444444 33343 378999999998888999999999999999875421                    11 34


Q ss_pred             HHHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeee
Q 026217          111 DAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI  153 (241)
Q Consensus       111 ~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~  153 (241)
                      .+.++     ..|+|+-++|...+-. -+.++++..++.+|..
T Consensus       196 ~~~~~-----~ADIVV~avG~~~~i~-~~~ik~gavVIDVGin  232 (285)
T PRK14189        196 AAHTR-----QADIVVAAVGKRNVLT-ADMVKPGATVIDVGMN  232 (285)
T ss_pred             HHHhh-----hCCEEEEcCCCcCccC-HHHcCCCCEEEEcccc
Confidence            44444     3899999999644322 2778999999898863

>PRK14103 trans-aconitate 2-methyltransferase; Provisional

Probab=96.37  E-value=0.039  Score=43.21  Aligned_cols=95  Identities=14%  Similarity=0.108  Sum_probs=66.3

Q ss_pred             HhcCCCCCcEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCcc
Q 026217           45 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGIN  123 (241)
Q Consensus        45 ~~~~~~~~~~vlI~ga~g~~G~~avqla~~~-g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d  123 (241)
                      ......++++||=.|  .|.|..+..+++.. +.+|++++.++.-.+.++ +.+.+. +..    +.. .+  ...+.||
T Consensus        23 ~~l~~~~~~~vLDlG--cG~G~~~~~l~~~~p~~~v~gvD~s~~~~~~a~-~~~~~~-~~~----d~~-~~--~~~~~fD   91 (255)
T PRK14103         23 ARVGAERARRVVDLG--CGPGNLTRYLARRWPGAVIEALDSSPEMVAAAR-ERGVDA-RTG----DVR-DW--KPKPDTD   91 (255)
T ss_pred             HhCCCCCCCEEEEEc--CCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHH-hcCCcE-EEc----Chh-hC--CCCCCce
Confidence            445667889999998  45577888888876 679999999999888888 555432 211    221 11  1123799


Q ss_pred             EEEeCCC-------chhHHHHHHhhccCCEEEEE
Q 026217          124 IYFENVG-------GKMLDAVLLNMRIQGRITLC  150 (241)
Q Consensus       124 ~v~d~~g-------~~~~~~~~~~l~~~G~~v~~  150 (241)
                      +|+....       ...+..+.+.|+++|.++..
T Consensus        92 ~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~  125 (255)
T PRK14103         92 VVVSNAALQWVPEHADLLVRWVDELAPGSWIAVQ  125 (255)
T ss_pred             EEEEehhhhhCCCHHHHHHHHHHhCCCCcEEEEE
Confidence            9987543       23567888899999999865

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=96.36  E-value=0.025  Score=46.36  Aligned_cols=73  Identities=12%  Similarity=0.073  Sum_probs=44.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHcCCCe-eecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           54 YVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~-g~~v~~~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      +|+|+||+|-+|...++.+... |.+|++++++.++...+....+... ..|..+.   ...+.+... ++|+||++++
T Consensus         3 ~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~~-~~d~ViH~aa   77 (347)
T PRK11908          3 KVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITIN---KEWIEYHVK-KCDVILPLVA   77 (347)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCC---HHHHHHHHc-CCCEEEECcc
Confidence            6999999999999998888765 6899999987655443320111111 1232211   112222222 5999999865

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=96.36  E-value=0.019  Score=45.85  Aligned_cols=92  Identities=17%  Similarity=0.184  Sum_probs=63.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe-eecCCCchhHHHHHHHHCCCCccEEEeCCCc-
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFENVGG-  131 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~-  131 (241)
                      .++|+||+|=+|-+.+.-+++.|.+.....|+..+++.++.++|... +++.-.+ +..+++-    .++++|++|+|. 
T Consensus         8 d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~~~~~p~~~p-~~~~~~~----~~~~VVlncvGPy   82 (382)
T COG3268           8 DIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPEAAVFPLGVP-AALEAMA----SRTQVVLNCVGPY   82 (382)
T ss_pred             eEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCccccccCCCCH-HHHHHHH----hcceEEEeccccc
Confidence            47899999999999999999999988888999999999998888752 3322222 2333332    259999999994 


Q ss_pred             -hh-HHHHHHhhccCCEEEEE
Q 026217          132 -KM-LDAVLLNMRIQGRITLC  150 (241)
Q Consensus       132 -~~-~~~~~~~l~~~G~~v~~  150 (241)
                       .. ...+..|++.+-.++.+
T Consensus        83 t~~g~plv~aC~~~GTdY~Di  103 (382)
T COG3268          83 TRYGEPLVAACAAAGTDYADI  103 (382)
T ss_pred             cccccHHHHHHHHhCCCeeec
Confidence             22 22333344444455544

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=96.35  E-value=0.015  Score=48.17  Aligned_cols=37  Identities=19%  Similarity=0.310  Sum_probs=33.0

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK   86 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~   86 (241)
                      ..+.+|+|+||+|-+|..++..+...|.+|+++++..
T Consensus        19 ~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~   55 (370)
T PLN02695         19 SEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKK   55 (370)
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecc
Confidence            3567899999999999999999999999999999753

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=96.34  E-value=0.012  Score=46.73  Aligned_cols=32  Identities=25%  Similarity=0.316  Sum_probs=29.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   85 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~   85 (241)
                      +|+|+||+|.+|...++.+...|.+|++++++
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~   32 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS   32 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc
Confidence            48999999999999999999999999999864

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]

Probab=96.34  E-value=0.074  Score=42.31  Aligned_cols=98  Identities=18%  Similarity=0.166  Sum_probs=63.1

Q ss_pred             CCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH---cCCCeeecCCCchhHHHHHHHHCCCCcc
Q 026217           48 SPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRYFPEGIN  123 (241)
Q Consensus        48 ~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~---~g~~~~i~~~~~~~~~~~i~~~~~~~~d  123 (241)
                      -+++|.+++=.|  .|.|.+++- ++++|+ +|++++..+-..+.+++.   .+.+.. ....   ..........+.+|
T Consensus       159 ~~~~g~~vlDvG--cGSGILaIA-a~kLGA~~v~g~DiDp~AV~aa~eNa~~N~v~~~-~~~~---~~~~~~~~~~~~~D  231 (300)
T COG2264         159 LLKKGKTVLDVG--CGSGILAIA-AAKLGAKKVVGVDIDPQAVEAARENARLNGVELL-VQAK---GFLLLEVPENGPFD  231 (300)
T ss_pred             hhcCCCEEEEec--CChhHHHHH-HHHcCCceEEEecCCHHHHHHHHHHHHHcCCchh-hhcc---cccchhhcccCccc
Confidence            367999999988  566776665 556677 799999887766666632   232210 0100   00011111224799


Q ss_pred             EEEeCCCc----hhHHHHHHhhccCCEEEEEee
Q 026217          124 IYFENVGG----KMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       124 ~v~d~~g~----~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      +|+-.+=.    ....+...+++|+|+++..|.
T Consensus       232 vIVANILA~vl~~La~~~~~~lkpgg~lIlSGI  264 (300)
T COG2264         232 VIVANILAEVLVELAPDIKRLLKPGGRLILSGI  264 (300)
T ss_pred             EEEehhhHHHHHHHHHHHHHHcCCCceEEEEee
Confidence            99987754    356778889999999999886

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=96.32  E-value=0.042  Score=40.58  Aligned_cols=32  Identities=16%  Similarity=0.262  Sum_probs=27.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGS   85 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~   85 (241)
                      +++|+|+.|++|+..++.+...+. +++.+.++
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~   34 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRS   34 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESS
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccC
Confidence            689999999999998888888776 99999988

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PLN02427 UDP-apiose/xylose synthase

Probab=96.32  E-value=0.028  Score=46.81  Aligned_cols=74  Identities=14%  Similarity=0.072  Sum_probs=48.2

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHcCC------Cee--ecCCCchhHHHHHHHHCCCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKFGF------DEA--FNYKEEPDLDAALKRYFPEG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~-g~~v~~~~~~~~~~~~~~~~~g~------~~~--i~~~~~~~~~~~i~~~~~~~  121 (241)
                      +..+|||+||+|-+|..+++.+... |.+|++++++.++.+.+. ..+.      -..  .|..+.    ..+.+... +
T Consensus        13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~-~~~~~~~~~~~~~~~~Dl~d~----~~l~~~~~-~   86 (386)
T PLN02427         13 KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLL-EPDTVPWSGRIQFHRINIKHD----SRLEGLIK-M   86 (386)
T ss_pred             cCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhh-ccccccCCCCeEEEEcCCCCh----HHHHHHhh-c
Confidence            3457999999999999998888877 589999998766655444 2221      011  233332    12222222 4


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|+||.+++
T Consensus        87 ~d~ViHlAa   95 (386)
T PLN02427         87 ADLTINLAA   95 (386)
T ss_pred             CCEEEEccc
Confidence            899999886

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=96.31  E-value=0.032  Score=42.95  Aligned_cols=76  Identities=16%  Similarity=0.128  Sum_probs=46.4

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHHH---cCCC---eeecCCCchhHHHHHHHHC--CCCccEE
Q 026217           55 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK-DKVDLLKNK---FGFD---EAFNYKEEPDLDAALKRYF--PEGINIY  125 (241)
Q Consensus        55 vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~-~~~~~~~~~---~g~~---~~i~~~~~~~~~~~i~~~~--~~~~d~v  125 (241)
                      ++|+||+|++|...++.+...|++|++++++. ++.+.+.++   .+..   ...|..+..++...+....  .+.+|.+
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l   80 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV   80 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            58999999999999999999999998887653 333322212   2321   1234444313332222211  1368899


Q ss_pred             EeCCC
Q 026217          126 FENVG  130 (241)
Q Consensus       126 ~d~~g  130 (241)
                      +.+.|
T Consensus        81 i~~ag   85 (239)
T TIGR01831        81 VLNAG   85 (239)
T ss_pred             EECCC
Confidence            88776

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.31  E-value=0.045  Score=41.20  Aligned_cols=81  Identities=15%  Similarity=0.210  Sum_probs=55.4

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCC
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV  129 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~  129 (241)
                      -.|.+++|.|. |.+|..+++.+...|++|++.++++++.+.+.+.+|.. .++..   .    +.   ...+|+++-|+
T Consensus        26 l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~-~v~~~---~----l~---~~~~Dv~vp~A   93 (200)
T cd01075          26 LEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGAT-VVAPE---E----IY---SVDADVFAPCA   93 (200)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCE-EEcch---h----hc---cccCCEEEecc
Confidence            35779999996 99999999999999999999999888888777566643 33221   1    11   11488888665


Q ss_pred             Cc-hhHHHHHHhhc
Q 026217          130 GG-KMLDAVLLNMR  142 (241)
Q Consensus       130 g~-~~~~~~~~~l~  142 (241)
                      .+ ..-...++.++
T Consensus        94 ~~~~I~~~~~~~l~  107 (200)
T cd01075          94 LGGVINDDTIPQLK  107 (200)
T ss_pred             cccccCHHHHHHcC
Confidence            43 23333344443

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK07578 short chain dehydrogenase; Provisional

Probab=96.30  E-value=0.025  Score=42.31  Aligned_cols=63  Identities=17%  Similarity=0.246  Sum_probs=41.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      +++|+||++++|...+..+... .+|+.+++++.           ....|..+...+...+...  +++|++++++|
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-----------~~~~D~~~~~~~~~~~~~~--~~id~lv~~ag   64 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-----------DVQVDITDPASIRALFEKV--GKVDAVVSAAG   64 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-----------ceEecCCChHHHHHHHHhc--CCCCEEEECCC
Confidence            6899999999999877776666 89999987643           1122333331333333322  36899998887

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.30  E-value=0.091  Score=41.59  Aligned_cols=93  Identities=17%  Similarity=0.093  Sum_probs=63.7

Q ss_pred             cCchhHHHHHHHHHhcCC-CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhH
Q 026217           32 LGMPGMTAYAGFFEVCSP-KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDL  110 (241)
Q Consensus        32 l~~~~~ta~~~l~~~~~~-~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~  110 (241)
                      +|+........| +..++ -.|.+|+|.|.+..+|.-+..++...|+.|++.-...                    . ++
T Consensus       137 ~PcTp~avi~lL-~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t--------------------~-~l  194 (285)
T PRK14191        137 VPATPMGVMRLL-KHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILT--------------------K-DL  194 (285)
T ss_pred             CCCcHHHHHHHH-HHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCc--------------------H-HH
Confidence            455544455444 33444 3699999999877999999999999999988764221                    1 33


Q ss_pred             HHHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEee
Q 026217          111 DAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       111 ~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      .+.++     ..|+|+-++|...+- --+.+++|..++.+|.
T Consensus       195 ~~~~~-----~ADIvV~AvG~p~~i-~~~~vk~GavVIDvGi  230 (285)
T PRK14191        195 SFYTQ-----NADIVCVGVGKPDLI-KASMVKKGAVVVDIGI  230 (285)
T ss_pred             HHHHH-----hCCEEEEecCCCCcC-CHHHcCCCcEEEEeec
Confidence            33343     389999999964332 2345788888888886

>PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals

Probab=96.29  E-value=0.0061  Score=39.37  Aligned_cols=82  Identities=18%  Similarity=0.264  Sum_probs=53.4

Q ss_pred             chHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe--eecCCCchhHHHHHHHHCCCCccEEEeCCCc-------h
Q 026217           62 GAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFPEGINIYFENVGG-------K  132 (241)
Q Consensus        62 g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~--~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~-------~  132 (241)
                      .|.|..+..+++.-+.+|++++.+++..+.+++......  +...+.. ++     ...++.+|.|+....-       .
T Consensus         5 ~G~G~~~~~l~~~~~~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~d~~-~l-----~~~~~sfD~v~~~~~~~~~~~~~~   78 (95)
T PF08241_consen    5 CGTGRFAAALAKRGGASVTGIDISEEMLEQARKRLKNEGVSFRQGDAE-DL-----PFPDNSFDVVFSNSVLHHLEDPEA   78 (95)
T ss_dssp             -TTSHHHHHHHHTTTCEEEEEES-HHHHHHHHHHTTTSTEEEEESBTT-SS-----SS-TT-EEEEEEESHGGGSSHHHH
T ss_pred             CcCCHHHHHHHhccCCEEEEEeCCHHHHHHHHhcccccCchheeehHH-hC-----ccccccccccccccceeeccCHHH
Confidence            457888888888867799999999999999984443321  2211111 11     1223479999865431       3


Q ss_pred             hHHHHHHhhccCCEEEE
Q 026217          133 MLDAVLLNMRIQGRITL  149 (241)
Q Consensus       133 ~~~~~~~~l~~~G~~v~  149 (241)
                      .+..+.+.|+++|+++.
T Consensus        79 ~l~e~~rvLk~gG~l~~   95 (95)
T PF08241_consen   79 ALREIYRVLKPGGRLVI   95 (95)
T ss_dssp             HHHHHHHHEEEEEEEEE
T ss_pred             HHHHHHHHcCcCeEEeC
Confidence            57889999999999874

The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B ....

>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed

Probab=96.29  E-value=0.033  Score=42.24  Aligned_cols=99  Identities=16%  Similarity=0.113  Sum_probs=61.6

Q ss_pred             HhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCCeeecCCCchhHHHHHHHHCCCC
Q 026217           45 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEPDLDAALKRYFPEG  121 (241)
Q Consensus        45 ~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~~~i~~~~~~~~~~~i~~~~~~~  121 (241)
                      ....++++++||-.|  .|.|..+..+++.. .+|++++.+++-.+.+++.+   +...+ +.... +..+.+.  ..+.
T Consensus        72 ~~l~~~~~~~VLeiG--~GsG~~t~~la~~~-~~v~~vd~~~~~~~~a~~~~~~~~~~~v-~~~~~-d~~~~~~--~~~~  144 (212)
T PRK00312         72 ELLELKPGDRVLEIG--TGSGYQAAVLAHLV-RRVFSVERIKTLQWEAKRRLKQLGLHNV-SVRHG-DGWKGWP--AYAP  144 (212)
T ss_pred             HhcCCCCCCEEEEEC--CCccHHHHHHHHHh-CEEEEEeCCHHHHHHHHHHHHHCCCCce-EEEEC-CcccCCC--cCCC
Confidence            456788999999998  44566666566553 48999999988777776433   33221 11111 1111110  1137


Q ss_pred             ccEEEeCCC-chhHHHHHHhhccCCEEEEE
Q 026217          122 INIYFENVG-GKMLDAVLLNMRIQGRITLC  150 (241)
Q Consensus       122 ~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~  150 (241)
                      +|.|+-... ........+.|+++|+++..
T Consensus       145 fD~I~~~~~~~~~~~~l~~~L~~gG~lv~~  174 (212)
T PRK00312        145 FDRILVTAAAPEIPRALLEQLKEGGILVAP  174 (212)
T ss_pred             cCEEEEccCchhhhHHHHHhcCCCcEEEEE
Confidence            998875544 34556778899999998764

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.29  E-value=0.081  Score=42.04  Aligned_cols=77  Identities=16%  Similarity=0.118  Sum_probs=54.3

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCC
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV  129 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~  129 (241)
                      -.|.+++|.|+++-+|.....++...|++|++..+..   .                  ++.+.++     .+|++++++
T Consensus       157 l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t---~------------------~L~~~~~-----~aDIvI~At  210 (283)
T PRK14192        157 LAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT---Q------------------NLPELVK-----QADIIVGAV  210 (283)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc---h------------------hHHHHhc-----cCCEEEEcc
Confidence            4788999999855599999999999999877776421   1                  2222221     499999999


Q ss_pred             CchhHHHHHHhhccCCEEEEEeee
Q 026217          130 GGKMLDAVLLNMRIQGRITLCGMI  153 (241)
Q Consensus       130 g~~~~~~~~~~l~~~G~~v~~g~~  153 (241)
                      |...+ .-.+.++++..++.+|..
T Consensus       211 G~~~~-v~~~~lk~gavViDvg~n  233 (283)
T PRK14192        211 GKPEL-IKKDWIKQGAVVVDAGFH  233 (283)
T ss_pred             CCCCc-CCHHHcCCCCEEEEEEEe
Confidence            85332 223558888888888764

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.27  E-value=0.14  Score=34.59  Aligned_cols=91  Identities=16%  Similarity=0.092  Sum_probs=59.4

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCchhH
Q 026217           55 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKML  134 (241)
Q Consensus        55 vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~  134 (241)
                      |+|.|. |.+|+..++.++..+.+|++++.+++..+.++ +.|.. ++.-+.  .-.+.+++..-..++.++-+++.+..
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~-~~~~~-~i~gd~--~~~~~l~~a~i~~a~~vv~~~~~d~~   75 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELR-EEGVE-VIYGDA--TDPEVLERAGIEKADAVVILTDDDEE   75 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-HTTSE-EEES-T--TSHHHHHHTTGGCESEEEEESSSHHH
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHH-hcccc-cccccc--hhhhHHhhcCccccCEEEEccCCHHH
Confidence            578885 99999999999997779999999999999999 77754 332221  11223333322378999988876422


Q ss_pred             ----HHHHHhhccCCEEEEE
Q 026217          135 ----DAVLLNMRIQGRITLC  150 (241)
Q Consensus       135 ----~~~~~~l~~~G~~v~~  150 (241)
                          ....+.+.+..+++..
T Consensus        76 n~~~~~~~r~~~~~~~ii~~   95 (116)
T PF02254_consen   76 NLLIALLARELNPDIRIIAR   95 (116)
T ss_dssp             HHHHHHHHHHHTTTSEEEEE
T ss_pred             HHHHHHHHHHHCCCCeEEEE
Confidence                2233334455666654

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=96.23  E-value=0.018  Score=46.26  Aligned_cols=74  Identities=7%  Similarity=0.006  Sum_probs=43.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCH--HHHHHHHHHcCC---Cee--ecCCCchhHHHHHHHHCCCCccE
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSK--DKVDLLKNKFGF---DEA--FNYKEEPDLDAALKRYFPEGINI  124 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g--~~v~~~~~~~--~~~~~~~~~~g~---~~~--i~~~~~~~~~~~i~~~~~~~~d~  124 (241)
                      +|+|+||+|.+|..+++.+...|  .+|++..+..  .+.+.+. .+..   ..+  .|..+..++.+.+..   -++|+
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~~~d~   76 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLA-DLEDNPRYRFVKGDIGDRELVSRLFTE---HQPDA   76 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhh-hhccCCCcEEEEcCCcCHHHHHHHHhh---cCCCE
Confidence            48999999999999999887766  6888876421  2222222 2211   112  233333123222321   15999


Q ss_pred             EEeCCCc
Q 026217          125 YFENVGG  131 (241)
Q Consensus       125 v~d~~g~  131 (241)
                      ||++++.
T Consensus        77 vi~~a~~   83 (317)
T TIGR01181        77 VVHFAAE   83 (317)
T ss_pred             EEEcccc
Confidence            9999973

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=96.22  E-value=0.02  Score=39.32  Aligned_cols=90  Identities=14%  Similarity=0.131  Sum_probs=51.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHH-HHHHHHHHcC----C-CeeecCCCchhHHHHHHHHCCCCccEEE
Q 026217           54 YVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKD-KVDLLKNKFG----F-DEAFNYKEEPDLDAALKRYFPEGINIYF  126 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~-g~~v~~~~~~~~-~~~~~~~~~g----~-~~~i~~~~~~~~~~~i~~~~~~~~d~v~  126 (241)
                      +|.|+||+|-+|..+++++..+ .+.++.+..+.. .-..+.+.++    . +..+...+    .+.+     ..+|+||
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~-----~~~Dvvf   71 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDAD----PEEL-----SDVDVVF   71 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETS----GHHH-----TTESEEE
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecc----hhHh-----hcCCEEE
Confidence            5899999999999999998876 456555443433 2222221222    1 11121111    1122     2599999


Q ss_pred             eCCCchhHHHHHHhh-ccCCEEEEEee
Q 026217          127 ENVGGKMLDAVLLNM-RIQGRITLCGM  152 (241)
Q Consensus       127 d~~g~~~~~~~~~~l-~~~G~~v~~g~  152 (241)
                      .|++..........+ ..+-+++..+.
T Consensus        72 ~a~~~~~~~~~~~~~~~~g~~ViD~s~   98 (121)
T PF01118_consen   72 LALPHGASKELAPKLLKAGIKVIDLSG   98 (121)
T ss_dssp             E-SCHHHHHHHHHHHHHTTSEEEESSS
T ss_pred             ecCchhHHHHHHHHHhhCCcEEEeCCH
Confidence            999986555555544 55556666544

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=96.22  E-value=0.082  Score=43.05  Aligned_cols=90  Identities=23%  Similarity=0.136  Sum_probs=63.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC------ee----ecCCCchhHHHHHHHHCCCCcc
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD------EA----FNYKEEPDLDAALKRYFPEGIN  123 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~------~~----i~~~~~~~~~~~i~~~~~~~~d  123 (241)
                      +|.|.|+ |.+|.+....+...|.+|++..+++++.+.+. ..+..      ..    +... . +..+.+     +.+|
T Consensus         6 ~I~iIG~-G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~-~~~~~~~~~~g~~~~~~~~~~-~-~~~e~~-----~~aD   76 (328)
T PRK14618          6 RVAVLGA-GAWGTALAVLAASKGVPVRLWARRPEFAAALA-AERENREYLPGVALPAELYPT-A-DPEEAL-----AGAD   76 (328)
T ss_pred             eEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-HhCcccccCCCCcCCCCeEEe-C-CHHHHH-----cCCC
Confidence            6899995 99999999988888999999999888777776 43211      00    1011 1 232222     2589


Q ss_pred             EEEeCCCchhHHHHHHhhccCCEEEEEee
Q 026217          124 IYFENVGGKMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       124 ~v~d~~g~~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      +|+-|+....+...++.++++-.++.+..
T Consensus        77 ~Vi~~v~~~~~~~v~~~l~~~~~vi~~~~  105 (328)
T PRK14618         77 FAVVAVPSKALRETLAGLPRALGYVSCAK  105 (328)
T ss_pred             EEEEECchHHHHHHHHhcCcCCEEEEEee
Confidence            99999998777888888887766665543

>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []

Probab=96.21  E-value=0.035  Score=42.84  Aligned_cols=101  Identities=20%  Similarity=0.305  Sum_probs=62.1

Q ss_pred             HhcCCCCCcEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHc---CCCe--eecCCCchhHHHHHHHH
Q 026217           45 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKNKF---GFDE--AFNYKEEPDLDAALKRY  117 (241)
Q Consensus        45 ~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g--~~v~~~~~~~~~~~~~~~~~---g~~~--~i~~~~~~~~~~~i~~~  117 (241)
                      +....++|++||=.|  .|+|..+..+++..+  .+|++++.+++=++.++++.   +...  .+.-+.+ ++.     .
T Consensus        41 ~~~~~~~g~~vLDv~--~GtG~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da~-~lp-----~  112 (233)
T PF01209_consen   41 KLLGLRPGDRVLDVA--CGTGDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDAE-DLP-----F  112 (233)
T ss_dssp             HHHT--S--EEEEET---TTSHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BTT-B-------S
T ss_pred             hccCCCCCCEEEEeC--CChHHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCHH-Hhc-----C
Confidence            345678999999887  778888889998875  49999999999887777432   2211  1111111 111     1


Q ss_pred             CCCCccEEEeCCCc-------hhHHHHHHhhccCCEEEEEeee
Q 026217          118 FPEGINIYFENVGG-------KMLDAVLLNMRIQGRITLCGMI  153 (241)
Q Consensus       118 ~~~~~d~v~d~~g~-------~~~~~~~~~l~~~G~~v~~g~~  153 (241)
                      .++.||.|..+.|-       ..+..+.+.|+|||+++++...
T Consensus       113 ~d~sfD~v~~~fglrn~~d~~~~l~E~~RVLkPGG~l~ile~~  155 (233)
T PF01209_consen  113 PDNSFDAVTCSFGLRNFPDRERALREMYRVLKPGGRLVILEFS  155 (233)
T ss_dssp             -TT-EEEEEEES-GGG-SSHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred             CCCceeEEEHHhhHHhhCCHHHHHHHHHHHcCCCeEEEEeecc
Confidence            12369999877761       3678899999999999988763

Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.

>PLN02240 UDP-glucose 4-epimerase

Probab=96.20  E-value=0.026  Score=46.23  Aligned_cols=34  Identities=24%  Similarity=0.263  Sum_probs=30.3

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   85 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~   85 (241)
                      +.+|+|+||+|.+|...++.+...|.+|+++++.
T Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~   38 (352)
T PLN02240          5 GRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNL   38 (352)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            5689999999999999999988889999998753

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=96.18  E-value=0.021  Score=46.05  Aligned_cols=72  Identities=22%  Similarity=0.231  Sum_probs=52.0

Q ss_pred             EEEEcCCchHHHHHHHHHHH----cCCEEEEEeCCHHHHHHHHHHcCCC----------eeecCCCchhHHHHHHHHCCC
Q 026217           55 VFVSAASGAVGQLVGQFAKL----VGCYVVGSAGSKDKVDLLKNKFGFD----------EAFNYKEEPDLDAALKRYFPE  120 (241)
Q Consensus        55 vlI~ga~g~~G~~avqla~~----~g~~v~~~~~~~~~~~~~~~~~g~~----------~~i~~~~~~~~~~~i~~~~~~  120 (241)
                      ++|.||+|-+|...+.-+..    -+...-+..|++++++...+..+..          -+.|.+++.++.+..+     
T Consensus         8 vVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak-----   82 (423)
T KOG2733|consen    8 VVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAK-----   82 (423)
T ss_pred             EEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHh-----
Confidence            78999999999999988877    4778999999999988776565542          1345555423333332     


Q ss_pred             CccEEEeCCCc
Q 026217          121 GINIYFENVGG  131 (241)
Q Consensus       121 ~~d~v~d~~g~  131 (241)
                      .+.+++||+|.
T Consensus        83 ~~~vivN~vGP   93 (423)
T KOG2733|consen   83 QARVIVNCVGP   93 (423)
T ss_pred             hhEEEEecccc
Confidence            48899999984

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=96.17  E-value=0.026  Score=45.58  Aligned_cols=87  Identities=14%  Similarity=0.074  Sum_probs=55.6

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      .|.+|.|+| .|.+|...++.++.+|.+|++..++.++..      +.....  ... ++.+.+.     ..|+|+.+..
T Consensus       135 ~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~~~------~~~~~~--~~~-~l~e~l~-----~aDvvv~~lP  199 (312)
T PRK15469        135 EDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKSWP------GVQSFA--GRE-ELSAFLS-----QTRVLINLLP  199 (312)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCCC------Cceeec--ccc-cHHHHHh-----cCCEEEECCC
Confidence            578999999 599999999999999999999986543221      111111  111 3333333     3777777776


Q ss_pred             c-hh-----HHHHHHhhccCCEEEEEee
Q 026217          131 G-KM-----LDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       131 ~-~~-----~~~~~~~l~~~G~~v~~g~  152 (241)
                      . +.     ....+..|+++..++.+|.
T Consensus       200 lt~~T~~li~~~~l~~mk~ga~lIN~aR  227 (312)
T PRK15469        200 NTPETVGIINQQLLEQLPDGAYLLNLAR  227 (312)
T ss_pred             CCHHHHHHhHHHHHhcCCCCcEEEECCC
Confidence            2 21     2345666777777776654

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=96.17  E-value=0.071  Score=43.23  Aligned_cols=86  Identities=20%  Similarity=0.184  Sum_probs=56.1

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~-~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      |.++.|+|. |.+|+..++.++.+|.+|++.++ ++...+.   ..+...+     . ++.+-+.+     .|++...+.
T Consensus       142 gkTvGIiG~-G~IG~~va~~l~afgm~v~~~d~~~~~~~~~---~~~~~~~-----~-~Ld~lL~~-----sDiv~lh~P  206 (324)
T COG0111         142 GKTVGIIGL-GRIGRAVAKRLKAFGMKVIGYDPYSPRERAG---VDGVVGV-----D-SLDELLAE-----ADILTLHLP  206 (324)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEECCCCchhhhc---cccceec-----c-cHHHHHhh-----CCEEEEcCC
Confidence            779999995 99999999999999999999997 3332221   1121111     1 34444443     777776654


Q ss_pred             -c-h----hHHHHHHhhccCCEEEEEee
Q 026217          131 -G-K----MLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       131 -~-~----~~~~~~~~l~~~G~~v~~g~  152 (241)
                       + +    .-...+..|+++..++.++.
T Consensus       207 lT~eT~g~i~~~~~a~MK~gailIN~aR  234 (324)
T COG0111         207 LTPETRGLINAEELAKMKPGAILINAAR  234 (324)
T ss_pred             CCcchhcccCHHHHhhCCCCeEEEECCC
Confidence             1 1    22456667787777776654

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=96.17  E-value=0.023  Score=45.30  Aligned_cols=82  Identities=12%  Similarity=0.186  Sum_probs=48.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCch-
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGK-  132 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~-  132 (241)
                      +|||+||+|.+|.+..+.++..|..|+++.++         .      +|..+...+.+.+.+.   .+|+|++|++-. 
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~---------~------~dl~d~~~~~~~~~~~---~pd~Vin~aa~~~   63 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSRS---------D------LDLTDPEAVAKLLEAF---KPDVVINCAAYTN   63 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT---------C------S-TTSHHHHHHHHHHH-----SEEEE------
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch---------h------cCCCCHHHHHHHHHHh---CCCeEeccceeec
Confidence            69999999999999999999999999999755         1      1222221233333322   589999998621 


Q ss_pred             -----------------hHHHHHHhhc-cCCEEEEEeee
Q 026217          133 -----------------MLDAVLLNMR-IQGRITLCGMI  153 (241)
Q Consensus       133 -----------------~~~~~~~~l~-~~G~~v~~g~~  153 (241)
                                       ....+.+.+. .+.+++.++..
T Consensus        64 ~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~~li~~STd  102 (286)
T PF04321_consen   64 VDACEKNPEEAYAINVDATKNLAEACKERGARLIHISTD  102 (286)
T ss_dssp             HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT-EEEEEEEG
T ss_pred             HHhhhhChhhhHHHhhHHHHHHHHHHHHcCCcEEEeecc
Confidence                             1123333443 46788888764

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=96.16  E-value=0.015  Score=45.46  Aligned_cols=73  Identities=10%  Similarity=0.088  Sum_probs=49.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCC-CCccEEEeCCCc
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFP-EGINIYFENVGG  131 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~-~~~d~v~d~~g~  131 (241)
                      +|+|.||+|= |...+..+...|.+|+++++++...+.+. ..|...+..-..  +-. .+.+... .++|+|+|++..
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~-~~g~~~v~~g~l--~~~-~l~~~l~~~~i~~VIDAtHP   75 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYP-IHQALTVHTGAL--DPQ-ELREFLKRHSIDILVDATHP   75 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccccc-ccCCceEEECCC--CHH-HHHHHHHhcCCCEEEEcCCH
Confidence            6999998665 99888888888999999999888777776 555433332221  111 2333332 379999998873

This enzyme was found to be a monomer by gel filtration.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	241
4hfj_A	351	X-ray Crystal Structure Of A Double Bond Reductase		1e-113
2j3h_A	345	Crystal Structure Of Arabidopsis Thaliana Double Bo		1e-102
4b7c_A	336	Crystal Structure Of Hypothetical Protein Pa1648 Fr		8e-52
1v3t_A	333	Crystal Structure Of Leukotriene B4 12- Hydroxydehy		7e-47
2y05_A	328	Crystal Structure Of Human Leukotriene B4 12-Hydrox		4e-44
1zsv_A	349	Crystal Structure Of Human Nadp-Dependent Leukotrie		4e-44
2w4q_A	357	Crystal Structure Of Human Zinc-Binding Alcohol Deh		4e-33
2zb4_A	357	Crystal Structure Of Human 15-Ketoprostaglandin Del		4e-33
2zb3_A	353	Crystal Structure Of Mouse 15-Ketoprostaglandin Del		2e-32
1vj1_A	363	Crystal Structure Of Putative Nadph-Dependent Oxido		1e-29
2c0c_A	362	Structure Of The Mgc45594 Gene Product Length = 362		2e-23
2x7h_A	370	Crystal Structure Of The Human Mgc45594 Gene Produc		2e-23
2wek_A	341	Crystal Structure Of The Human Mgc45594 Gene Produc		3e-23
1yb5_A	351	Crystal Structure Of Human Zeta-crystallin With Bou		2e-09
2j8z_A	354	Crystal Structure Of Human P53 Inducible Oxidoreduc		1e-08
2oby_A	338	Crystal Structure Of Human P53 Inducible Oxidoreduc		2e-08
2eih_A	343	Crystal Structure Of Nad-Dependent Alcohol Dehydrog		8e-08
1wly_A	333	Crystal Structure Of 2-haloacrylate Reductase Lengt		1e-07
4dup_A	353	Crystal Structure Of A Quinone Oxidoreductase From		6e-07
3qwa_A	334	Crystal Structure Of Saccharomyces Cerevisiae Zeta-		3e-06
2vz8_A	2512	Crystal Structure Of Mammalian Fatty Acid Synthase		2e-05
4a27_A	349	Crystal Structure Of Human Synaptic Vesicle Membran		3e-05
3uog_A	363	Crystal Structure Of Putative Alcohol Dehydrogenase		7e-04

>pdb|4HFJ|A Chain A, X-ray Crystal Structure Of A Double Bond Reductase From Nicotiana Tabacum Length = 351

Iteration: 1
 Score =  404 bits (1039), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 195/242 (80%), Positives = 220/242 (90%), Gaps = 1/242 (0%)
Query: 1   MTGWEEYSLVTAPR-LFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSA 59
           MTGWEEYS++T  + LFKI   D+PLSYYTGILGMPGMTAYAGF EVCSPK+GE VFVSA
Sbjct: 102 MTGWEEYSIITPTQTLFKIHDKDVPLSYYTGILGMPGMTAYAGFHEVCSPKKGETVFVSA 161
Query: 60  ASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFP 119
           ASGAVGQLVGQFAK++GCYVVGSAGSK+KVDLLK+KFGFDEAFNYKEE DL AALKRYFP
Sbjct: 162 ASGAVGQLVGQFAKMLGCYVVGSAGSKEKVDLLKSKFGFDEAFNYKEEQDLSAALKRYFP 221
Query: 120 EGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEG 179
           +GI+IYFENVGGKMLDAVL+NM++ GRI +CGMISQYN ++ EGVHNL CLI+KRIRMEG
Sbjct: 222 DGIDIYFENVGGKMLDAVLVNMKLYGRIAVCGMISQYNLEQTEGVHNLFCLITKRIRMEG 281
Query: 180 FLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVA 239
           FLV DY+HLYPK+LEM+IP+IK GK+VYVED A GLESAP ALVGLFSGRN+GKQVV V+
Sbjct: 282 FLVFDYYHLYPKYLEMVIPQIKAGKVVYVEDVAHGLESAPTALVGLFSGRNIGKQVVMVS 341
Query: 240 TE 241
            E
Sbjct: 342 RE 343

>pdb|2J3H|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond Reductase (At5g16970)-Apo Form Length = 345

Iteration: 1
 Score =  366 bits (939), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 177/243 (72%), Positives = 206/243 (84%), Gaps = 2/243 (0%)
Query: 1   MTGWEEYSLVT--APRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVS 58
           +  WEEYS++T      FKIQHTD+PLSYYTG+LGMPGMTAYAGF+EVCSPK+GE V+VS
Sbjct: 103 IVAWEEYSVITPMTHAHFKIQHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVS 162
Query: 59  AASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYF 118
           AASGAVGQLVGQ AK++GCYVVGSAGSK+KVDLLK KFGFD+AFNYKEE DL AALKR F
Sbjct: 163 AASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCF 222
Query: 119 PEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRME 178
           P GI+IYFENVGGKMLDAVL+NM + GRI +CGMISQYN +  EGVHNL+ +I KR R++
Sbjct: 223 PNGIDIYFENVGGKMLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQ 282
Query: 179 GFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 238
           GF+V D++  Y KFLE ++P I+EGKI YVED A+GLE AP ALVGLF G+NVGKQVV V
Sbjct: 283 GFVVSDFYDKYSKFLEFVLPHIREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVV 342
Query: 239 ATE 241
           A E
Sbjct: 343 ARE 345

>pdb|4B7C|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From Pseudomonas Aeruginosa. Length = 336

Iteration: 1
 Score =  200 bits (508), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 109/237 (45%), Positives = 144/237 (60%), Gaps = 2/237 (0%)
Query: 3   GWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASG 62
           G ++Y +      +K+  +  PL  Y   LGM GMTAY    +V  PK GE V +S A+G
Sbjct: 101 GVQDYFIGEPKGFYKVDPSRAPLPRYLSALGMTGMTAYFALLDVGQPKNGETVVISGAAG 160
Query: 63  AVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGI 122
           AVG + GQ A+L GC VVG AG  +K   L  + GFD A +YK E DL A LKR  P+GI
Sbjct: 161 AVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKNE-DLAAGLKRECPKGI 219
Query: 123 NIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKP-EGVHNLTCLISKRIRMEGFL 181
           +++F+NVGG++LD VL  +  + RI LCG ISQYNN +   G  N   L+  R RMEG +
Sbjct: 220 DVFFDNVGGEILDTVLTRIAFKARIVLCGAISQYNNKEAVRGPANYLSLLVNRARMEGMV 279
Query: 182 VPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 238
           V DY   +P+ L+ M   + EGK+   ED  EGLE+ P  L+ LFSG N GK V++V
Sbjct: 280 VMDYAQRFPEGLKEMATWLAEGKLQSREDIVEGLETFPETLLKLFSGENFGKLVLKV 336

>pdb|1V3T|A Chain A, Crystal Structure Of Leukotriene B4 12- Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase Length = 333

Iteration: 1
 Score =  183 bits (465), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 108/241 (44%), Positives = 149/241 (61%), Gaps = 8/241 (3%)
Query: 2   TGWEEYSLVTAPRLFKI---QHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVS 58
           +GW  + +     L K+       +PLS   G +GMPG+TAY G  EVC  K GE V VS
Sbjct: 93  SGWTTHFISDGKGLEKLLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVS 152
Query: 59  AASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYF 118
           AA+GAVG +VGQ AKL GC VVG+AGS +K+  LK + GFD AFNYK    L+ ALK+  
Sbjct: 153 AAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK-QIGFDAAFNYKTVNSLEEALKKAS 211
Query: 119 PEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYN--NDKPEGVHNLTCLISKRIR 176
           P+G + YF+NVGG+ L+ VL  M+  G+I +CG IS YN  +  P G  +   +I K++R
Sbjct: 212 PDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPG-PSPESIIYKQLR 270
Query: 177 MEGFLVPDYF-HLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQV 235
           +EGF+V  +   +  K L  ++  + EGKI Y E   +G E+ PAA + + +G N+GK V
Sbjct: 271 IEGFIVYRWQGDVREKALRDLMKWVLEGKIQYHEHVTKGFENMPAAFIEMLNGANLGKAV 330
Query: 236 V 236
           V
Sbjct: 331 V 331

>pdb|2Y05|A Chain A, Crystal Structure Of Human Leukotriene B4 12-Hydroxydehydrogenase In Complex With Nadp And Raloxifene Length = 328

Iteration: 1
 Score =  174 bits (441), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 103/240 (42%), Positives = 141/240 (58%), Gaps = 6/240 (2%)
Query: 3   GWEEYSLVTAPRLFKI---QHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSA 59
           GW  +S+     L K+       +PLS   G +GMPG+TAY G  E+C  K GE V V+A
Sbjct: 89  GWTTHSISDGKDLEKLLTEWPDTIPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNA 148
Query: 60  ASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFP 119
           A+GAVG +VGQ AKL GC VVG+ GS +KV  L+ K GFD  FNYK    L+  LK+  P
Sbjct: 149 AAGAVGSVVGQIAKLKGCKVVGAVGSDEKVAYLQ-KLGFDVVFNYKTVESLEETLKKASP 207
Query: 120 EGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLT-CLISKRIRME 178
           +G + YF+NVGG+  + V+  M+  GRI +CG IS YN   P         +I + +RME
Sbjct: 208 DGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRME 267
Query: 179 GFLVPDYF-HLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVE 237
            F+V  +      K L+ ++  + EGKI Y E   EG E+ PAA +G+  G N+GK +V+
Sbjct: 268 AFVVYRWQGDARQKALKDLLKWVLEGKIQYKEYIIEGFENMPAAFMGMLKGDNLGKTIVK 327

>pdb|1ZSV|A Chain A, Crystal Structure Of Human Nadp-Dependent Leukotriene B4 12- Hydroxydehydrogenase Length = 349

Iteration: 1
 Score =  174 bits (441), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 103/240 (42%), Positives = 141/240 (58%), Gaps = 6/240 (2%)
Query: 3   GWEEYSLVTAPRLFKI---QHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSA 59
           GW  +S+     L K+       +PLS   G +GMPG+TAY G  E+C  K GE V V+A
Sbjct: 110 GWTTHSISDGKDLEKLLTEWPDTIPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNA 169
Query: 60  ASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFP 119
           A+GAVG +VGQ AKL GC VVG+ GS +KV  L+ K GFD  FNYK    L+  LK+  P
Sbjct: 170 AAGAVGSVVGQIAKLKGCKVVGAVGSDEKVAYLQ-KLGFDVVFNYKTVESLEETLKKASP 228
Query: 120 EGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLT-CLISKRIRME 178
           +G + YF+NVGG+  + V+  M+  GRI +CG IS YN   P         +I + +RME
Sbjct: 229 DGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRME 288
Query: 179 GFLVPDYF-HLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVE 237
            F+V  +      K L+ ++  + EGKI Y E   EG E+ PAA +G+  G N+GK +V+
Sbjct: 289 AFVVYRWQGDARQKALKDLLKWVLEGKIQYKEYIIEGFENMPAAFMGMLKGDNLGKTIVK 348

>pdb|2W4Q|A Chain A, Crystal Structure Of Human Zinc-Binding Alcohol Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And 18beta-Glycyrrhetinic Acid Length = 357

Iteration: 1
 Score =  137 bits (346), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 88/252 (34%), Positives = 130/252 (51%), Gaps = 20/252 (7%)
Query: 4   WEEYSLVTAPRLFKI--QHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQG--EYVFVSA 59
           W+   ++    L K+  Q  D  LSY+ G +GMPG+T+  G  E      G  + + VS 
Sbjct: 104 WQTKVILDGNSLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSG 163
Query: 60  ASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYF 118
           A+GA G + GQ    +GC  VVG  G+ +K  LL ++ GFD A NYK++ ++   L+   
Sbjct: 164 AAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKD-NVAEQLRESC 222
Query: 119 PEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKP---------EGVHNLTC 169
           P G+++YF+NVGG + D V+  M     I LCG ISQYN D P         E +     
Sbjct: 223 PAGVDVYFDNVGGNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQK--- 279
Query: 170 LISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGR 229
              + I  E FLV +Y   +   +  +    KEGK+   E    GLE+  AA   + +G 
Sbjct: 280 --ERNITRERFLVLNYKDKFEPGILQLSQWFKEGKLKIKETVINGLENMGAAFQSMMTGG 337
Query: 230 NVGKQVVEVATE 241
           N+GKQ+V ++ E
Sbjct: 338 NIGKQIVCISEE 349

>pdb|2ZB4|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13- Reductase In Complex With Nadp And 15-Keto-Pge2 Length = 357

Iteration: 1
 Score =  137 bits (346), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 88/252 (34%), Positives = 130/252 (51%), Gaps = 20/252 (7%)
Query: 4   WEEYSLVTAPRLFKI--QHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQG--EYVFVSA 59
           W+   ++    L K+  Q  D  LSY+ G +GMPG+T+  G  E      G  + + VS 
Sbjct: 109 WQTKVILDGNSLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSG 168
Query: 60  ASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYF 118
           A+GA G + GQ    +GC  VVG  G+ +K  LL ++ GFD A NYK++ ++   L+   
Sbjct: 169 AAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKD-NVAEQLRESC 227
Query: 119 PEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKP---------EGVHNLTC 169
           P G+++YF+NVGG + D V+  M     I LCG ISQYN D P         E +     
Sbjct: 228 PAGVDVYFDNVGGNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQK--- 284
Query: 170 LISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGR 229
              + I  E FLV +Y   +   +  +    KEGK+   E    GLE+  AA   + +G 
Sbjct: 285 --ERNITRERFLVLNYKDKFEPGILQLSQWFKEGKLKIKETVINGLENMGAAFQSMMTGG 342
Query: 230 NVGKQVVEVATE 241
           N+GKQ+V ++ E
Sbjct: 343 NIGKQIVCISEE 354

>pdb|2ZB3|A Chain A, Crystal Structure Of Mouse 15-Ketoprostaglandin Delta-13- Reductase In Complex With Nadph Length = 353

Iteration: 1
 Score =  135 bits (340), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/247 (35%), Positives = 132/247 (53%), Gaps = 10/247 (4%)
Query: 4   WEEYSLVTAPRLFKI--QHTDMPLSYYTGILGMPGMTAYAGFFEV--CSPKQGEYVFVSA 59
           W+  +++    L K+  Q  D  LSY+ G +GMPG+T+  G  E    S    + + VS 
Sbjct: 105 WQTKAILDGNGLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGVQEKGHISAGSNQTMVVSG 164
Query: 60  ASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYF 118
           A+GA G L GQ   L+GC  VVG  G+++K   L ++ GFD A NYK   ++   L+   
Sbjct: 165 AAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVNYKT-GNVAEQLREAC 223
Query: 119 PEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKR---- 174
           P G+++YF+NVGG + +AV+  M     I LCG ISQY+ND P        + + R    
Sbjct: 224 PGGVDVYFDNVGGDISNAVISQMNENSHIILCGQISQYSNDVPYPPPLPPAVEAIRKERN 283
Query: 175 IRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQ 234
           I  E F V +Y   +   +  +    KEGK+   E  A+GLE+   A   + +G NVGKQ
Sbjct: 284 ITRERFTVLNYKDKFEPGILQLSQWFKEGKLKVKETMAKGLENMGVAFQSMMTGGNVGKQ 343
Query: 235 VVEVATE 241
           +V ++ +
Sbjct: 344 IVCISED 350

>pdb|1VJ1|A Chain A, Crystal Structure Of Putative Nadph-Dependent Oxidoreductase From Mus Musculus At 2.10 A Resolution Length = 363

Iteration: 1
 Score =  126 bits (316), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 126/247 (51%), Gaps = 10/247 (4%)
Query: 4   WEEYSLVTAPRLFKI--QHTDMPLSYYTGILGMPGMTAYAGFFEV--CSPKQGEYVFVSA 59
           W+  +++    L K+  Q  D  LSY+ G +G PG+T+  G  E    S    +   VS 
Sbjct: 115 WQTKAILDGNGLEKVDPQLVDGHLSYFLGAIGXPGLTSLIGVQEKGHISAGSNQTXVVSG 174
Query: 60  ASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYF 118
           A+GA G L GQ   L+GC  VVG  G+++K   L ++ GFD A NYK   ++   L+   
Sbjct: 175 AAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVNYKT-GNVAEQLREAC 233
Query: 119 PEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKR---- 174
           P G+++YF+NVGG + + V+        I LCG ISQYN D P        + + R    
Sbjct: 234 PGGVDVYFDNVGGDISNTVISQXNENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKERN 293
Query: 175 IRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQ 234
           I  E F V +Y   +   +  +    KEGK+   E  A+GLE+   A     +G NVGKQ
Sbjct: 294 ITRERFTVLNYKDKFEPGILQLSQWFKEGKLKVKETVAKGLENXGVAFQSXXTGGNVGKQ 353
Query: 235 VVEVATE 241
           +V ++ +
Sbjct: 354 IVCISED 360

>pdb|2C0C|A Chain A, Structure Of The Mgc45594 Gene Product Length = 362

Iteration: 1
 Score =  105 bits (262), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 109/217 (50%), Gaps = 18/217 (8%)
Query: 36  GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK 95
           G TAY    E+    +G+ V V+AA+G  GQ   Q +K   C+V+G+  S +K   LK+ 
Sbjct: 148 GTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS- 206
Query: 96  FGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQ 155
            G D   NYK EP +   LK+ +PEG+++ +E+VGG M D  +  +  +GR+ + G IS 
Sbjct: 207 LGCDRPINYKTEP-VGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISG 265
Query: 156 YNNDKPEGVHNLTC------LISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIV--- 206
           Y    P G+  +        L+ K   ++GF +  Y   Y   +  ++     G +V   
Sbjct: 266 YQT--PTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEV 323
Query: 207 -----YVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 238
                  E +  GLES   A+  ++ G+N GK VVE+
Sbjct: 324 DLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVEL 360

>pdb|2X7H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In Complex With Fenoprofen Length = 370

Iteration: 1
 Score =  105 bits (262), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 109/217 (50%), Gaps = 18/217 (8%)
Query: 36  GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK 95
           G TAY    E+    +G+ V V+AA+G  GQ   Q +K   C+V+G+  S +K   LK+ 
Sbjct: 156 GTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS- 214
Query: 96  FGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQ 155
            G D   NYK EP +   LK+ +PEG+++ +E+VGG M D  +  +  +GR+ + G IS 
Sbjct: 215 LGCDRPINYKTEP-VGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISG 273
Query: 156 YNNDKPEGVHNLTC------LISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIV--- 206
           Y    P G+  +        L+ K   ++GF +  Y   Y   +  ++     G +V   
Sbjct: 274 YQT--PTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEV 331
Query: 207 -----YVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 238
                  E +  GLES   A+  ++ G+N GK VVE+
Sbjct: 332 DLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVEL 368

>pdb|2WEK|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In Complex With Diclofenac Length = 341

Iteration: 1
 Score =  105 bits (261), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 109/217 (50%), Gaps = 18/217 (8%)
Query: 36  GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK 95
           G TAY    E+    +G+ V V+AA+G  GQ   Q +K   C+V+G+  S +K   LK+ 
Sbjct: 127 GTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS- 185
Query: 96  FGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQ 155
            G D   NYK EP +   LK+ +PEG+++ +E+VGG M D  +  +  +GR+ + G IS 
Sbjct: 186 LGCDRPINYKTEP-VGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISG 244
Query: 156 YNNDKPEGVHNLTC------LISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIV--- 206
           Y    P G+  +        L+ K   ++GF +  Y   Y   +  ++     G +V   
Sbjct: 245 YQT--PTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEV 302
Query: 207 -----YVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 238
                  E +  GLES   A+  ++ G+N GK VVE+
Sbjct: 303 DLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVEL 339

>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp Length = 351

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 9/152 (5%)
Query: 3   GWEEYSLVTAPRLFKIQHTDMPLSYYTGI-LGMPGMTAYAGFFEVCSPKQGEYVFVSAAS 61
           G+ EY+L     ++K+      L +  G  +G+P  TAY         K GE V V  AS
Sbjct: 124 GYAEYALAADHTVYKLPEK---LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGAS 180
Query: 62  GAVGQLVGQFAKLVGCYVVGSAGSKDKVDL-LKNKFGFDEAFNYKEEPDLDAALKRYFPE 120
           G VG    Q A+  G  ++G+AG+++   + L+N  G  E FN++E   +D  +K+Y  E
Sbjct: 181 GGVGLAACQIARAYGLKILGTAGTEEGQKIVLQN--GAHEVFNHREVNYID-KIKKYVGE 237
Query: 121 -GINIYFENVGGKMLDAVLLNMRIQGRITLCG 151
            GI+I  E +    L   L  +   GR+ + G
Sbjct: 238 KGIDIIIEMLANVNLSKDLSLLSHGGRVIVVG 269

>pdb|2J8Z|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase ( Tp53i3,Pig3) Length = 354

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 21/214 (9%)
Query: 37  MTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF 96
           +TA+     V + + G+YV + A    VG    Q  ++ G   + +AGS+ K+ + + K 
Sbjct: 148 LTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAE-KL 206
Query: 97  GFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQY 156
           G    FNYK+E   +A LK     G+N+  + +GG   +  +  + + GR  L G++   
Sbjct: 207 GAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMGGG 266
Query: 157 NNDKPEGVHNLTCLISKRIRMEGFLVPDYFH---------LYPKFLEMMIPRIK-EG--K 204
           + + P        L SK +   G L+              L   F E ++P    EG  +
Sbjct: 267 DINGP--------LFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQR 318
Query: 205 IVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 238
           ++ V D+   +     A   + + +N+GK V+E+
Sbjct: 319 LLPVLDRIYPVTEIQEAHKYMEANKNIGKIVLEL 352

>pdb|2OBY|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase (Tp53i3,Pig3) Length = 338

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 21/214 (9%)
Query: 37  MTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF 96
           +TA+     V + + G+YV + A    VG    Q  ++ G   + +AGS+ K+ + + K 
Sbjct: 132 LTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAE-KL 190
Query: 97  GFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQY 156
           G    FNYK+E   +A LK     G+N+  + +GG   +  +  + + GR  L G++   
Sbjct: 191 GAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMGGG 250
Query: 157 NNDKPEGVHNLTCLISKRIRMEGFLVPDYFH---------LYPKFLEMMIPRIK-EG--K 204
           + + P        L SK +   G L+              L   F E ++P    EG  +
Sbjct: 251 DINGP--------LFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQR 302
Query: 205 IVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 238
           ++ V D+   +     A   + + +N+GK V+E+
Sbjct: 303 LLPVLDRIYPVTEIQEAHKYMEANKNIGKIVLEL 336

>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase Length = 343

Iteration: 1
 Score = 53.9 bits (128), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 81/181 (44%), Gaps = 10/181 (5%)
Query: 37  MTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF 96
           +TA+    +    + G+ V V AA   V     Q AKL G  V+ +AGS+DK+   K   
Sbjct: 152 LTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-AL 210
Query: 97  GFDEAFNYKEEPDLDAALKRYF-PEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQ 155
           G DE  NY   PD    ++R    +G +   ++ G    + V+      GRI + G  S 
Sbjct: 211 GADETVNYT-HPDWPKEVRRLTGGKGADKVVDHTGALYFEGVIKATANGGRIAIAGASSG 269
Query: 156 YNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYP--KFLEMMIPRIKEGKIVYVEDKAE 213
           Y     EG      +  +++ + G  +     L+P  +F+E    +   G+++ +E  AE
Sbjct: 270 Y-----EGTLPFAHVFYRQLSILGSTMASKSRLFPILRFVEEGKLKPVVGQVLPLEAAAE 324
Query: 214 G 214
           G
Sbjct: 325 G 325

>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase Length = 333

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/155 (22%), Positives = 76/155 (49%), Gaps = 3/155 (1%)
Query: 1   MTGWEEYSLVTAPRLFKI-QHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSA 59
           +  + +  L  A +L K+ +  D+   +  G++ + GMTA     +    K G+YV + A
Sbjct: 95  LGAYSQERLYPAEKLIKVPKDLDLDDVHLAGLM-LKGMTAQYLLHQTHKVKPGDYVLIHA 153
Query: 60  ASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFP 119
           A+G +G ++  +A+ +G  V+G+  +++K +  + K G     NY  +   +   +    
Sbjct: 154 AAGGMGHIMVPWARHLGATVIGTVSTEEKAETAR-KLGCHHTINYSTQDFAEVVREITGG 212
Query: 120 EGINIYFENVGGKMLDAVLLNMRIQGRITLCGMIS 154
           +G+++ ++++G   L   L  +R +G     G  S
Sbjct: 213 KGVDVVYDSIGKDTLQKSLDCLRPRGMCAAYGHAS 247

>pdb|4DUP|A Chain A, Crystal Structure Of A Quinone Oxidoreductase From Rhizobium Etli Cfn 42 Length = 353

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 50/208 (24%), Positives = 84/208 (40%), Gaps = 15/208 (7%)
Query: 38  TAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFG 97
           T +A  F+     +GE V +   +  +G    Q A+  G  V  +AGS  K +  + + G
Sbjct: 154 TVWANLFQXAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE-RLG 212
Query: 98  FDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRIT----LCGMI 153
                NY+ E D  A +K    +G++I  + +G    +  + ++   G ++    L G +
Sbjct: 213 AKRGINYRSE-DFAAVIKAETGQGVDIILDXIGAAYFERNIASLAKDGCLSIIAFLGGAV 271
Query: 154 SQYNNDKPEGVHNLTCLISK---RIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVED 210
           ++  N  P  V  LT   S    R   E   + D        L  + P ++ G +  V  
Sbjct: 272 AEKVNLSPIXVKRLTVTGSTXRPRTAEEKRAIRD------DLLSEVWPLLEAGTVAPVIH 325
Query: 211 KAEGLESAPAALVGLFSGRNVGKQVVEV 238
           K    E    A   L  G +VGK  + V
Sbjct: 326 KVFAFEDVADAHRLLEEGSHVGKVXLTV 353

>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Zeta-Crystallin-Like Quinone Oxidoreductase Zta1 Length = 334

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 63/119 (52%), Gaps = 3/119 (2%)
Query: 27  YYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK 86
           Y  G+L +  +TA +   E    K+G+YV + AA+G VG ++ Q  K+ G + +  A + 
Sbjct: 126 YAAGLLQV--LTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTD 183
Query: 87  DKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQG 145
           +K+ + K ++G +   N  +E  L   LK    +G++  F++VG    +  L  ++ +G
Sbjct: 184 EKLKIAK-EYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGKDTFEISLAALKRKG 241

>pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase Length = 2512

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/212 (23%), Positives = 86/212 (40%), Gaps = 14/212 (6%)
Query: 38   TAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF- 96
            TAY         + GE V + + SG VGQ     A   GC V  + GS +K   L+ +F 
Sbjct: 1654 TAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFP 1713
Query: 97   GFDEAF--NYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMIS 154
              DE    N ++       L+    +G+++   ++  + L A +  +   GR    G   
Sbjct: 1714 QLDETCFANSRDTSFEQHVLRHTAGKGVDLVLNSLAEEKLQASVRCLAQHGRFLEIGKFD 1773
Query: 155  QYNNDKPEGVHNL-TCLISKRIRMEGFLVPDYFH----LYPKFLEMMIPRIKEGKIVYVE 209
              NN      H L   +  K +   G L+   F      + +  E++   I+EG +  ++
Sbjct: 1774 LSNN------HALGMAVFLKNVTFHGILLDSLFEEGGATWQEVSELLKAGIQEGVVQPLK 1827
Query: 210  DKAEGLESAPAALVGLFSGRNVGKQVVEVATE 241
                      AA   +  G+++GK V++V  E
Sbjct: 1828 CTVFPRTKVEAAFRYMAQGKHIGKVVIQVREE 1859

>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane Protein Vat-1 Homolog-Like Protein Length = 349

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 56/132 (42%), Gaps = 10/132 (7%)
Query: 2   TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAAS 61
             W E        ++KI   DM  S       M  +TAY   FEV + ++G  V V +A 
Sbjct: 95  NAWAEVVCTPVEFVYKIPD-DMSFSE-AAAFPMNFVTAYVMLFEVANLREGMSVLVHSAG 152
Query: 62  GAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFG--FDEAFNYKEEPDLDAALKRYFP 119
           G VGQ V Q    V    V    S  K + +K+     FD   +Y +E      +KR   
Sbjct: 153 GGVGQAVAQLCSTVPNVTVFGTASTFKHEAIKDSVTHLFDRNADYVQE------VKRISA 206
Query: 120 EGINIYFENVGG 131
           EG++I  + + G
Sbjct: 207 EGVDIVLDCLCG 218

>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 363

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 54/128 (42%), Gaps = 2/128 (1%)
Query: 36  GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK 95
           G+TA+    E    + G+ V V   +G V     Q AK  G  V+ ++ S++K+D     
Sbjct: 174 GLTAWFALVEKGHLRAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDR-AFA 231
Query: 96  FGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQ 155
            G D   N  EE  ++         G +   E  GG  L   L  +   GRI++ G++  
Sbjct: 232 LGADHGINRLEEDWVERVYALTGDRGADHILEIAGGAGLGQSLKAVAPDGRISVIGVLEG 291
Query: 156 YNNDKPEG 163
           +    P G
Sbjct: 292 FEVSGPVG 299

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	241
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	1e-153
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	1e-139
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	1e-133
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	3e-88
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	2e-27
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	7e-27
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	5e-26
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	1e-24
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	6e-24
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	8e-24
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	1e-23
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	1e-22
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	4e-22
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	2e-21
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	2e-21
4eye_A	342	Probable oxidoreductase; structural genomics, niai	9e-21
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	1e-20
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	1e-20
3gms_A	340	Putative NADPH:quinone reductase; structural genom	2e-20
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	8e-20
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	2e-19
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	3e-19
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	1e-18
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	2e-17
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	8e-17
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	2e-16
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	3e-16
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	6e-16
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	4e-13
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	1e-12
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	1e-11
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	4e-09
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	3e-08
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	4e-08
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	6e-08
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	2e-07
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	4e-07
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	5e-07
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	6e-07
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	6e-07
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	9e-07
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	3e-06
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	1e-05
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	2e-05
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	4e-05
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	9e-05

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* Length = 345

 Score =  429 bits (1105), Expect = e-153
 Identities = 177/243 (72%), Positives = 206/243 (84%), Gaps = 2/243 (0%)

Query: 1   MTGWEEYSLVTAP--RLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVS 58
           +  WEEYS++T      FKIQHTD+PLSYYTG+LGMPGMTAYAGF+EVCSPK+GE V+VS
Sbjct: 103 IVAWEEYSVITPMTHAHFKIQHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVS 162

Query: 59  AASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYF 118
           AASGAVGQLVGQ AK++GCYVVGSAGSK+KVDLLK KFGFD+AFNYKEE DL AALKR F
Sbjct: 163 AASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCF 222

Query: 119 PEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRME 178
           P GI+IYFENVGGKMLDAVL+NM + GRI +CGMISQYN +  EGVHNL+ +I KR R++
Sbjct: 223 PNGIDIYFENVGGKMLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQ 282

Query: 179 GFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 238
           GF+V D++  Y KFLE ++P I+EGKI YVED A+GLE AP ALVGLF G+NVGKQVV V
Sbjct: 283 GFVVSDFYDKYSKFLEFVLPHIREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVV 342

Query: 239 ATE 241
           A E
Sbjct: 343 ARE 345

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* Length = 333

 Score =  392 bits (1009), Expect = e-139
 Identities = 107/241 (44%), Positives = 148/241 (61%), Gaps = 6/241 (2%)

Query: 1   MTGWEEYSLVTAPRLFKI---QHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFV 57
            +GW  + +     L K+       +PLS   G +GMPG+TAY G  EVC  K GE V V
Sbjct: 92  QSGWTTHFISDGKGLEKLLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLV 151

Query: 58  SAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRY 117
           SAA+GAVG +VGQ AKL GC VVG+AGS +K+  LK + GFD AFNYK    L+ ALK+ 
Sbjct: 152 SAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK-QIGFDAAFNYKTVNSLEEALKKA 210

Query: 118 FPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNN-DKPEGVHNLTCLISKRIR 176
            P+G + YF+NVGG+ L+ VL  M+  G+I +CG IS YN  D+     +   +I K++R
Sbjct: 211 SPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLR 270

Query: 177 MEGFLVPDYF-HLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQV 235
           +EGF+V  +   +  K L  ++  + EGKI Y E   +G E+ PAA + + +G N+GK V
Sbjct: 271 IEGFIVYRWQGDVREKALRDLMKWVLEGKIQYHEHVTKGFENMPAAFIEMLNGANLGKAV 330

Query: 236 V 236
           V
Sbjct: 331 V 331

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* Length = 357

 Score =  377 bits (971), Expect = e-133
 Identities = 87/250 (34%), Positives = 128/250 (51%), Gaps = 10/250 (4%)

Query: 1   MTGWEEYSLVTAPRLFKI--QHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQG--EYVF 56
              W+   ++    L K+  Q  D  LSY+ G +GMPG+T+  G  E      G  + + 
Sbjct: 106 YWPWQTKVILDGNSLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMV 165

Query: 57  VSAASGAVGQLVGQFAKLVGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALK 115
           VS A+GA G + GQ    +GC  VVG  G+ +K  LL ++ GFD A NYK++ ++   L+
Sbjct: 166 VSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKD-NVAEQLR 224

Query: 116 RYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGV----HNLTCLI 171
              P G+++YF+NVGG + D V+  M     I LCG ISQYN D P              
Sbjct: 225 ESCPAGVDVYFDNVGGNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQK 284

Query: 172 SKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNV 231
            + I  E FLV +Y   +   +  +    KEGK+   E    GLE+  AA   + +G N+
Sbjct: 285 ERNITRERFLVLNYKDKFEPGILQLSQWFKEGKLKIKETVINGLENMGAAFQSMMTGGNI 344

Query: 232 GKQVVEVATE 241
           GKQ+V ++ E
Sbjct: 345 GKQIVCISEE 354

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score =  264 bits (677), Expect = 3e-88
 Identities = 72/249 (28%), Positives = 114/249 (45%), Gaps = 18/249 (7%)

Query: 3   GWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASG 62
            + EY++V A     +         Y   L + G TAY    E+    +G+ V V+AA+G
Sbjct: 119 SFAEYTVVPASIATPV---PSVKPEYLT-LLVSGTTAYISLKELGGLSEGKKVLVTAAAG 174

Query: 63  AVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGI 122
             GQ   Q +K   C+V+G+  S +K   LK   G D   NYK E  +   LK+ +PEG+
Sbjct: 175 GTGQFAMQLSKKAKCHVIGTCSSDEKSAFLK-SLGCDRPINYKTE-PVGTVLKQEYPEGV 232

Query: 123 NIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGV----HNLTCLISKRIRME 178
           ++ +E+VGG M D  +  +  +GR+ + G IS Y                 L+ K   ++
Sbjct: 233 DVVYESVGGAMFDLAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQ 292

Query: 179 GFLVPDYFHLYPKFLEMMIPRIKEGKIVYVED--------KAEGLESAPAALVGLFSGRN 230
           GF +  Y   Y   +  ++     G +V   D        +  GLES   A+  ++ G+N
Sbjct: 293 GFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKN 352

Query: 231 VGKQVVEVA 239
            GK VVE+ 
Sbjct: 353 TGKIVVELP 361

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349

 Score =  106 bits (267), Expect = 2e-27
 Identities = 44/239 (18%), Positives = 87/239 (36%), Gaps = 21/239 (8%)

Query: 3   GWEEYSLVTAPRLFKIQHTDMP--LSYYTG-ILGMPGMTAYAGFFEVCSPKQGEYVFVSA 59
            W EY++  A     +        +    G  + +  +TA A  F++   +  +   ++A
Sbjct: 119 SWAEYAVAEAAACIPL-----LDTVRDEDGAAMIVNPLTAIA-MFDIVKQEGEKAFVMTA 172

Query: 60  ASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYF- 118
            +  + +L+   AK  G   + +    +++ LLK   G     N K   D +A L+    
Sbjct: 173 GASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DIGAAHVLNEKAP-DFEATLREVMK 230

Query: 119 PEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRME 178
            E   I+ + V G +  A+   M  + R  + G +          +     LI +   +E
Sbjct: 231 AEQPRIFLDAVTGPLASAIFNAMPKRARWIIYGRLDP----DATVIREPGQLIFQHKHIE 286

Query: 179 GFLVPDYFHLYPKFLEMMI----PRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGK 233
           GF + ++   + +     I     R  +G+          L  A A +      +  GK
Sbjct: 287 GFWLSEWMRQFKERRGPAILEAQKRFSDGRWSTDVTAVVPLAEAIAWVP-AELTKPNGK 344

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353

 Score =  104 bits (263), Expect = 7e-27
 Identities = 46/207 (22%), Positives = 87/207 (42%), Gaps = 11/207 (5%)

Query: 37  MTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF 96
            T +A  F++    +GE V +   +  +G    Q A+  G  V  +AGS  K +  + + 
Sbjct: 153 FTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE-RL 211

Query: 97  GFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQY 156
           G     NY+ E D  A +K    +G++I  + +G    +  + ++   G +++   +   
Sbjct: 212 GAKRGINYRSE-DFAAVIKAETGQGVDIILDMIGAAYFERNIASLAKDGCLSIIAFLG-- 268

Query: 157 NNDKPEGVHNLTCLISKRIRMEGFLV---PDYF--HLYPKFLEMMIPRIKEGKIVYVEDK 211
                E V NL+ ++ KR+ + G  +          +    L  + P ++ G +  V  K
Sbjct: 269 -GAVAEKV-NLSPIMVKRLTVTGSTMRPRTAEEKRAIRDDLLSEVWPLLEAGTVAPVIHK 326

Query: 212 AEGLESAPAALVGLFSGRNVGKQVVEV 238
               E    A   L  G +VGK ++ V
Sbjct: 327 VFAFEDVADAHRLLEEGSHVGKVMLTV 353

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score =  102 bits (257), Expect = 5e-26
 Identities = 51/209 (24%), Positives = 87/209 (41%), Gaps = 13/209 (6%)

Query: 32  LGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDL 91
           + +  +TA+    +    + G+ V V AA   V     Q AKL G  V+ +AGS+DK+  
Sbjct: 147 IPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRR 206

Query: 92  LKNKFGFDEAFNYKEEPDLDAALKRYFP-EGINIYFENVGGKMLDAVLLNMRIQGRITLC 150
            K   G DE  NY   PD    ++R    +G +   ++ G    + V+      GRI + 
Sbjct: 207 AK-ALGADETVNYTH-PDWPKEVRRLTGGKGADKVVDHTGALYFEGVIKATANGGRIAIA 264

Query: 151 GMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVED 210
           G  S     +         +  +++ + G  +          L  ++  ++EGK+  V  
Sbjct: 265 GASSG---YEGTL--PFAHVFYRQLSILGSTMAS-----KSRLFPILRFVEEGKLKPVVG 314

Query: 211 KAEGLESAPAALVGLFSGRNVGKQVVEVA 239
           +   LE+A      L   R  GK V++V 
Sbjct: 315 QVLPLEAAAEGHRLLEERRVFGKVVLQVG 343

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score = 99.3 bits (248), Expect = 1e-24
 Identities = 44/247 (17%), Positives = 92/247 (37%), Gaps = 21/247 (8%)

Query: 3   GWEEYSLVTAPRLFKIQHTDMP--LSYYTG-ILGMPGMTAYAGFFEVCSPKQGEYVFVSA 59
            W   ++ +   L ++     P  +   +   LG+   TAY    +    + G+ V  +A
Sbjct: 121 TWRTEAVFSEEALIQV-----PSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNA 175

Query: 60  ASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKR 116
           ++  VGQ V Q A  +G   +     +  +  L +     G +     +E    +     
Sbjct: 176 SNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFF 235

Query: 117 YFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIR 176
                  +    VGGK    +L  +   G +   G ++     K   V +++ LI K ++
Sbjct: 236 KDMPQPRLALNCVGGKSSTELLRQLARGGTMVTYGGMA-----KQPVVASVSLLIFKDLK 290

Query: 177 MEGFLVPDYFHLYP--KFLEMM---IPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNV 231
           + GF +  +   +   +F E++      I+ G++         L+   +AL         
Sbjct: 291 LRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLTAPACSQVPLQDYQSALEASMKPFIS 350

Query: 232 GKQVVEV 238
            KQ++ +
Sbjct: 351 SKQILTM 357

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349

 Score = 97.3 bits (243), Expect = 6e-24
 Identities = 57/259 (22%), Positives = 93/259 (35%), Gaps = 29/259 (11%)

Query: 3   GWEEYSLVTAPRLFKIQHTDMP--LSYYTG-ILGMPGMTAYAGFFEVCSPKQGEYVFVSA 59
            W E        ++KI     P  +S+       M  +TAY   FEV + ++G  V V +
Sbjct: 96  AWAEVVCTPVEFVYKI-----PDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHS 150

Query: 60  ASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFP 119
           A G VGQ V Q    V    V    S  K + +K+       F+     D    +KR   
Sbjct: 151 AGGGVGQAVAQLCSTVPNVTVFGTASTFKHEAIKD--SVTHLFDRNA--DYVQEVKRISA 206

Query: 120 EGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVH-----------NLT 168
           EG++I  + + G      L  ++  G   L G  +    +                 N  
Sbjct: 207 EGVDIVLDCLCGDNTGKGLSLLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPI 266

Query: 169 CLISKRIRMEGFLVPDYFHLYPK------FLEMMIPRIKEGKIVYVEDKAEGLESAPAAL 222
            L  +   + GF + +      +       +E +I    + KI  V D    LE    A+
Sbjct: 267 KLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGLYNQKKIKPVVDSLWALEEVKEAM 326

Query: 223 VGLFSGRNVGKQVVEVATE 241
             +    N+GK +++V   
Sbjct: 327 QRIHDRGNIGKLILDVEKT 345

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score = 98.0 bits (244), Expect = 8e-24
 Identities = 46/226 (20%), Positives = 68/226 (30%), Gaps = 30/226 (13%)

Query: 32  LGMPGMTAYAGFFEVCSP--KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKV 89
             +   TAY           KQG+ V +  ASG +G    QF K  G   V    S  K 
Sbjct: 199 SPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKE 258

Query: 90  DLLKNKFGFDEAFNYKEEPDLDAALKRYFP-----------------EGINIYFENVGGK 132
             ++   G D   N  E    D                            +I FE+ G  
Sbjct: 259 AAVR-ALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRV 317

Query: 133 MLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKF 192
                ++  R  G +  CG  S Y +       +   L  K  ++ G    ++       
Sbjct: 318 TFGLSVIVARRGGTVVTCGSSSGYLHT-----FDNRYLWMKLKKIVGSHGANHEE----- 367

Query: 193 LEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 238
            +      + G +V        L  A  A   + + R VGK  V  
Sbjct: 368 QQATNRLFESGAVVPAMSAVYPLAEAAEACRVVQTSRQVGKVAVLC 413

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score = 97.6 bits (243), Expect = 1e-23
 Identities = 48/226 (21%), Positives = 72/226 (31%), Gaps = 30/226 (13%)

Query: 32  LGMPGMTAYAGFFEVCS--PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKV 89
            G+   TAY           KQG+ V +  ASG +G    QFA   G   +    S  K 
Sbjct: 207 PGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKA 266

Query: 90  DLLKNKFGFDEAFNYKEE----------------PDLDAALKRYF-PEGINIYFENVGGK 132
           ++ +   G +   +   E                      ++     E I+I FE+ G +
Sbjct: 267 EICR-AMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRE 325

Query: 133 MLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKF 192
              A +   R  G IT C   S Y ++          L     R+ G    +Y       
Sbjct: 326 TFGASVFVTRKGGTITTCASTSGYMHEYD-----NRYLWMSLKRIIGSHFANYRE----- 375

Query: 193 LEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 238
                  I +G+I     K   LE    A   +    + GK  V  
Sbjct: 376 AWEANRLIAKGRIHPTLSKVYSLEDTGQAAYDVHRNLHQGKVGVLC 421

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score = 93.6 bits (233), Expect = 1e-22
 Identities = 39/260 (15%), Positives = 80/260 (30%), Gaps = 32/260 (12%)

Query: 3   GWEEYSLVTAPRLFKIQHTDMPLSYYT--GI-------LGMPGMTAYAGFFEVCSPKQGE 53
            W  ++L       K+ +     +     G+       + +  +TAY           G+
Sbjct: 109 TWRTHALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGK 168

Query: 54  YVFV-SAASGAVGQLVGQFAKLVGCYVVGSAGSK----DKVDLLKNKFGFDEAFNYKEE- 107
             F+ +  + AVG+   Q  KL+    +     +    + V  LK + G  +     +  
Sbjct: 169 DWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLK-ELGATQVITEDQNN 227

Query: 108 -PDLDAALKRYF---PEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEG 163
             +    +K +         +    VGGK    +   +   G +   G +S         
Sbjct: 228 SREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMS-----FQPV 282

Query: 164 VHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMI----PRIKEGKIVYVEDKA---EGLE 216
               +  I K     GF V +      +     +       +EGK+   +      +G +
Sbjct: 283 TIPTSLYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGKLTDAKSIETLYDGTK 342

Query: 217 SAPAALVGLFSGRNVGKQVV 236
                     +    GKQ++
Sbjct: 343 PLHELYQDGVANSKDGKQLI 362

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score = 92.3 bits (230), Expect = 4e-22
 Identities = 51/207 (24%), Positives = 78/207 (37%), Gaps = 15/207 (7%)

Query: 32  LGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDL 91
           L   G+TA+    E    + G+ V V    G V     Q AK  G  V+ ++ S++K+D 
Sbjct: 170 LPCAGLTAWFALVEKGHLRAGDRVVVQGTGG-VALFGLQIAKATGAEVIVTSSSREKLDR 228

Query: 92  LKNKFGFDEAFNYKEEPDLDAALKRYFP-EGINIYFENVGGKMLDAVLLNMRIQGRITLC 150
                G D   N   E D    +       G +   E  GG  L   L  +   GRI++ 
Sbjct: 229 AF-ALGADHGINRL-EEDWVERVYALTGDRGADHILEIAGGAGLGQSLKAVAPDGRISVI 286

Query: 151 GMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVED 210
           G++        E    +  L+ K   ++G  V        + LE ++  +    +  V D
Sbjct: 287 GVLEG-----FEVSGPVGPLLLKSPVVQGISVGH-----RRALEDLVGAVDRLGLKPVID 336

Query: 211 KAEGLESAPAALVGLFSGRNVGKQVVE 237
                   P AL  L  G   GK V+E
Sbjct: 337 MRYKFTEVPEALAHLDRG-PFGKVVIE 362

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354

 Score = 90.4 bits (225), Expect = 2e-21
 Identities = 49/211 (23%), Positives = 93/211 (44%), Gaps = 15/211 (7%)

Query: 37  MTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF 96
           +TA+     V + + G+YV + A    VG    Q  ++ G   + +AGS+ K+ + + K 
Sbjct: 148 LTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAE-KL 206

Query: 97  GFDEAFNYKEEPDLDAALKRYF-PEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQ 155
           G    FNYK+E D   A  ++    G+N+  + +GG   +  +  + + GR  L G++  
Sbjct: 207 GAAAGFNYKKE-DFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMG- 264

Query: 156 YNNDKPEGVHNLTCLISKRIRMEGFLV----PDYF-HLYPKFLEMMIPRI---KEGKIVY 207
                       + L+ KR  +   L+      Y   L   F E ++P        +++ 
Sbjct: 265 --GGDIN-GPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQRLLP 321

Query: 208 VEDKAEGLESAPAALVGLFSGRNVGKQVVEV 238
           V D+   +     A   + + +N+GK V+E+
Sbjct: 322 VLDRIYPVTEIQEAHKYMEANKNIGKIVLEL 352

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334

 Score = 90.0 bits (224), Expect = 2e-21
 Identities = 45/207 (21%), Positives = 89/207 (42%), Gaps = 11/207 (5%)

Query: 36  GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK 95
            +TA +   E    K+G+YV + AA+G VG ++ Q  K+ G + +  A + +K+ + K +
Sbjct: 133 VLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAK-E 191

Query: 96  FGFDEAFNYKEEPDLDAALKRYF-PEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMIS 154
           +G +   N  +E D+   + ++   +G++  F++VG    +  L  ++ +G     G  S
Sbjct: 192 YGAEYLINASKE-DILRQVLKFTNGKGVDASFDSVGKDTFEISLAALKRKGVFVSFGNAS 250

Query: 155 QYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEM---MIPRIKEGKIVYVEDK 211
                      ++T L  K I +    +  Y     ++          +   K+     K
Sbjct: 251 G----LIPPF-SITRLSPKNITLVRPQLYGYIADPEEWKYYSDEFFGLVNSKKLNIKIYK 305

Query: 212 AEGLESAPAALVGLFSGRNVGKQVVEV 238
              L     A   + S + VGK V+E+
Sbjct: 306 TYPLRDYRTAAADIESRKTVGKLVLEI 332

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342

 Score = 88.0 bits (219), Expect = 9e-21
 Identities = 46/243 (18%), Positives = 82/243 (33%), Gaps = 22/243 (9%)

Query: 3   GWEEYSLVTAPRLFKIQHTDMP--LSYYTG-ILGMPGMTAYAGFFEVCSPKQGEYVFVSA 59
           G+ E   V    +        P  L       L     T Y  +      + GE V V  
Sbjct: 113 GYAERVAVAPSNILPT-----PPQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLG 167

Query: 60  ASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYF- 118
           A+G +G    Q AK +G  V+         + +K   G D     +E      A++    
Sbjct: 168 AAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVK-SVGADIVLPLEE--GWAKAVREATG 224

Query: 119 PEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRME 178
             G+++  + +GG   D  +  +  +GR+ + G  +      P     +  L+ +   + 
Sbjct: 225 GAGVDMVVDPIGGPAFDDAVRTLASEGRLLVVGFAA---GGIPT--IKVNRLLLRNASLI 279

Query: 179 GFLVPDYFHLYPKFL----EMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQ 234
           G    ++   +  +L      +   + EG    V      L     AL     G+  GK 
Sbjct: 280 GVAWGEFLRTHADYLYETQAGLEKLVAEGMRPPV-SARIPLSEGRQALQDFADGKVYGKM 338

Query: 235 VVE 237
           V+ 
Sbjct: 339 VLV 341

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333

 Score = 88.1 bits (219), Expect = 1e-20
 Identities = 48/236 (20%), Positives = 101/236 (42%), Gaps = 13/236 (5%)

Query: 6   EYSLVTAPRLFKI-QHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAV 64
           +  L  A +L K+ +  D+   +  G++ + GMTA     +    K G+YV + AA+G +
Sbjct: 100 QERLYPAEKLIKVPKDLDLDDVHLAGLM-LKGMTAQYLLHQTHKVKPGDYVLIHAAAGGM 158

Query: 65  GQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFP-EGIN 123
           G ++  +A+ +G  V+G+  +++K +  + K G     NY  + D    ++     +G++
Sbjct: 159 GHIMVPWARHLGATVIGTVSTEEKAETAR-KLGCHHTINYSTQ-DFAEVVREITGGKGVD 216

Query: 124 IYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKR-IRMEGFLV 182
           + ++++G   L   L  +R +G     G  S       + +  +  L  +  + +    +
Sbjct: 217 VVYDSIGKDTLQKSLDCLRPRGMCAAYGHASG----VADPIRVVEDLGVRGSLFITRPAL 272

Query: 183 PDYFHLYPKFLEM---MIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQV 235
             Y     +  E    +   +K G +     K   L  A AA   +   + +G  V
Sbjct: 273 WHYMSNRSEIDEGSKCLFDAVKAGVLHSSVAKTFPLREAAAAHKYMGGRQTIGSIV 328

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score = 88.0 bits (219), Expect = 1e-20
 Identities = 56/245 (22%), Positives = 98/245 (40%), Gaps = 32/245 (13%)

Query: 6   EYSLVTAPRLFKIQHTDMP--LSYYTG-ILGMPGMTAYAGFFEVCSPKQGEYVFVSAASG 62
           EY+L     ++K+     P  L +  G  +G+P  TAY         K GE V V  ASG
Sbjct: 127 EYALAADHTVYKL-----PEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASG 181

Query: 63  AVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRY-FPEG 121
            VG    Q A+  G  ++G+AG+++   ++  + G  E FN++E  +    +K+Y   +G
Sbjct: 182 GVGLAACQIARAYGLKILGTAGTEEGQKIVL-QNGAHEVFNHREV-NYIDKIKKYVGEKG 239

Query: 122 INIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFL 181
           I+I  E +    L   L  +   GR+ + G          E   N    ++K   + G  
Sbjct: 240 IDIIIEMLANVNLSKDLSLLSHGGRVIVVGSRG-----TIEI--NPRDTMAKESSIIG-- 290

Query: 182 VPDYFHLYP-------KFLEMMIPRIKEGKIVYVEDKAEGLESAPAAL-VGLFSGRNVGK 233
                 L+        ++   +   ++ G +  V      LE    A    +      GK
Sbjct: 291 ----VTLFSSTKEEFQQYAAALQAGMEIGWLKPVIGSQYPLEKVAEAHENIIHGSGATGK 346

Query: 234 QVVEV 238
            ++ +
Sbjct: 347 MILLL 351

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340

 Score = 87.2 bits (217), Expect = 2e-20
 Identities = 36/247 (14%), Positives = 90/247 (36%), Gaps = 24/247 (9%)

Query: 3   GWEEYSLVTAPRLFKIQHTDMP--LSYYTG-ILGMPGMTAYAGFFEVCSPKQGEYVFVSA 59
            W+EY   +A  +  I     P  +  +T   + +  +TA+    E  + ++ + + V+A
Sbjct: 98  TWQEYVKTSADFVVPI-----PDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNA 152

Query: 60  ASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRY-F 118
              A+G L  Q ++++   ++    +    + L  + G     +      L   +     
Sbjct: 153 CGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELL-RLGAAYVIDTSTA-PLYETVMELTN 210

Query: 119 PEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRME 178
             G +   +++GG   + +  ++R  G     G++S       +       +   ++   
Sbjct: 211 GIGADAAIDSIGGPDGNELAFSLRPNGHFLTIGLLS-----GIQVNWAEI-VTKAKVHAN 264

Query: 179 GFLVPDYFHLYP--KFLEMM---IPRIKEGKIVYVE-DKAEGLESAPAALVGLFSGR-NV 231
            F +  +       K+ E     I  ++  ++ +++      L    AA+  + S     
Sbjct: 265 IFHLRHWNDEVSPYKWQETFRHLIRLVENEQLRFMKVHSTYELADVKAAVDVVQSAEKTK 324

Query: 232 GKQVVEV 238
           GK  +  
Sbjct: 325 GKVFLTS 331

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325

 Score = 85.3 bits (212), Expect = 8e-20
 Identities = 33/150 (22%), Positives = 61/150 (40%), Gaps = 5/150 (3%)

Query: 6   EYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVG 65
           E  ++    L K+    +       ++ + G+T      +    K GE +   AA+G VG
Sbjct: 97  EVHVLPEANLVKLAD-SVSFEQAAALM-LKGLTVQYLLRQTYQVKPGEIILFHAAAGGVG 154

Query: 66  QLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFP-EGINI 124
            L  Q+AK +G  ++G+  S +K    K   G  E  +Y  E D+   +      +   +
Sbjct: 155 SLACQWAKALGAKLIGTVSSPEKAAHAK-ALGAWETIDYSHE-DVAKRVLELTDGKKCPV 212

Query: 125 YFENVGGKMLDAVLLNMRIQGRITLCGMIS 154
            ++ VG       L ++  +G +   G  S
Sbjct: 213 VYDGVGQDTWLTSLDSVAPRGLVVSFGNAS 242

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327

 Score = 84.6 bits (210), Expect = 2e-19
 Identities = 34/150 (22%), Positives = 62/150 (41%), Gaps = 5/150 (3%)

Query: 6   EYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVG 65
               + A +   +    +          + G+T Y    +    K  E     AA+G VG
Sbjct: 97  SVHNIIADKAAILPA-AISFEQAAASF-LKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVG 154

Query: 66  QLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFP-EGINI 124
            +  Q+AK +G  ++G+ G+  K      K G  +  NY+EE DL   LK     + + +
Sbjct: 155 LIACQWAKALGAKLIGTVGTAQKAQSAL-KAGAWQVINYREE-DLVERLKEITGGKKVRV 212

Query: 125 YFENVGGKMLDAVLLNMRIQGRITLCGMIS 154
            +++VG    +  L  ++ +G +   G  S
Sbjct: 213 VYDSVGRDTWERSLDCLQRRGLMVSFGNSS 242

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371

 Score = 84.4 bits (209), Expect = 3e-19
 Identities = 40/264 (15%), Positives = 80/264 (30%), Gaps = 39/264 (14%)

Query: 6   EYSLVTAPRLFKIQHTDMP--LSYYTG-ILGMPGMTAYAGFFEV------------CSPK 50
           +Y++       KI     P  LS+     L     TA      +             +  
Sbjct: 109 QYTVTRGRVWAKI-----PKGLSFEQAAALPAGISTAGLAMKLLGLPLPSPSADQPPTHS 163

Query: 51  QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDL 110
           +  YV V   S A   +  Q  +L G   + +  S    DL K   G +E F+Y+  P+L
Sbjct: 164 KPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAK-SRGAEEVFDYR-APNL 220

Query: 111 DAALKRYFPEGINIYFENVGG----KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHN 166
              ++ Y    +    + +          A +   R  G         ++   +     +
Sbjct: 221 AQTIRTYTKNNLRYALDCITNVESTTFCFAAIG--RAGGHYVSLNPFPEHAATRKMVTTD 278

Query: 167 LT---CLISKRIRMEGFLV----PDYFHLYPKFLEMMIPRIKEGKIVYVEDK--AEGLES 217
            T    +  +              +          +    +++G++V+   +    G + 
Sbjct: 279 WTLGPTIFGEGSTWPAPYGRPGSEEERQFGEDLWRIAGQLVEDGRLVHHPLRVVQGGFDH 338

Query: 218 APAALVGLFSGRNVG-KQVVEVAT 240
               +  +  G   G K VV +  
Sbjct: 339 IKQGMELVRKGELSGEKLVVRLEG 362

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343

 Score = 82.3 bits (204), Expect = 1e-18
 Identities = 40/217 (18%), Positives = 78/217 (35%), Gaps = 24/217 (11%)

Query: 34  MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 93
           +  +TA+ G  +    + G+ V +    G VG +  Q A   G  V  +A     ++ ++
Sbjct: 133 LVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFATA-RGSDLEYVR 191

Query: 94  NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 153
              G       +E  D  A       +G ++ ++ +GG +LDA    ++  G +  C   
Sbjct: 192 -DLGATPIDASREPEDYAAEHTA--GQGFDLVYDTLGGPVLDASFSAVKRFGHVVSCLGW 248

Query: 154 SQYNNDKPEGVHNLTCLISKRIRMEG------FLVPDYFHLYPKFLEMMIPRIKEGKI-V 206
                    G H L  L  K+    G       L  +    + + L      ++ GK+  
Sbjct: 249 ---------GTHKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEMLREADALVQTGKLAP 299

Query: 207 YVEDKAEGLESAPAALVGLF----SGRNVGKQVVEVA 239
            ++ +   +    +A   +       R  GK  + V 
Sbjct: 300 RLDPRTFSIAEIGSAYDAVLGRNDVPRQRGKIAITVE 336

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321

 Score = 78.8 bits (195), Expect = 2e-17
 Identities = 50/209 (23%), Positives = 81/209 (38%), Gaps = 24/209 (11%)

Query: 32  LGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDL 91
           L   G+TA     +    KQG+ V + A +G VG L  Q AK  G  V+ +A SK     
Sbjct: 134 LPTAGLTALQALNQA-EVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAF 191

Query: 92  LKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGR-ITLC 150
           LK   G ++  NY EE  L A         ++   + VGG +    +  ++  G  +++ 
Sbjct: 192 LK-ALGAEQCINYHEEDFLLAI-----STPVDAVIDLVGGDVGIQSIDCLKETGCIVSVP 245

Query: 151 GMISQYNNDKPEGVHNLTCLISKRIRMEGFLV-PDYFHLYPKFLEMMIPRIKEGKIVYVE 209
            + +    +  +          K  R  G L   +      + L  +   + E K+    
Sbjct: 246 TITAGRVIEVAK---------QKHRRAFGLLKQFN-----IEELHYLGKLVSEDKLRIEI 291

Query: 210 DKAEGLESAPAALVGLFSGRNVGKQVVEV 238
            +   L  A  A   L +G   GK V +V
Sbjct: 292 SRIFQLSEAVTAHELLETGHVRGKLVFKV 320

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375

 Score = 77.4 bits (191), Expect = 8e-17
 Identities = 44/220 (20%), Positives = 83/220 (37%), Gaps = 18/220 (8%)

Query: 32  LGMPGMTAYAGFFEV----CSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD 87
           L    +TA++   +V         G+ V +  ASG VG    Q  K    +V     S+D
Sbjct: 160 LPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQD 218

Query: 88  KVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRI 147
             +L++ K G D+  +YK    ++  LK    +  +   +NVGG         ++     
Sbjct: 219 ASELVR-KLGADDVIDYKSG-SVEEQLKS--LKPFDFILDNVGGSTETWAPDFLKKWSGA 274

Query: 148 TLCGMISQYNND------KPEGVHNLTCLISKRIRMEGFLVPDYFHLY---PKFLEMMIP 198
           T   +++ +  +          +     + SK ++     V   +  +      L+ +  
Sbjct: 275 TYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFFMASGPCLDDIAE 334

Query: 199 RIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 238
            +  GKI  V ++       P A + +  G   GK V+ V
Sbjct: 335 LVDAGKIRPVIEQTFPFSKVPEAFLKVERGHARGKTVINV 374

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346

 Score = 76.1 bits (188), Expect = 2e-16
 Identities = 50/234 (21%), Positives = 85/234 (36%), Gaps = 37/234 (15%)

Query: 23  MPLSYYTGILGMPGMTAYAGFFEV------CSPKQGEYVFVSAASGAVGQLVGQFAKLVG 76
           +PL   TGI      TAY   F+V       +  +G+ + +   +G VG +  Q AK  G
Sbjct: 125 LPL---TGI------TAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYG 175

Query: 77  CYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKM-LD 135
             V+ +A   + ++  K K G D   N+KE   L    K    E ++  F      M  D
Sbjct: 176 LRVITTASRNETIEWTK-KMGADIVLNHKE--SLLNQFKTQGIELVDYVFCTFNTDMYYD 232

Query: 136 AVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRM--EGFLVPDYFHLYP--- 190
            ++  ++ +G I              E   +L  L  K +    E               
Sbjct: 233 DMIQLVKPRGHIATI--------VAFENDQDLNALKPKSLSFSHEFMFARPLNQTDDMIK 284

Query: 191 --KFLEMMIPRIKEGKIVYVEDKAEG---LESAPAALVGLFSGRNVGKQVVEVA 239
             ++LE +  ++++        K       E+   A   L S   +GK V+ + 
Sbjct: 285 HHEYLEDITNKVEQNIYQPTTTKVIEGLTTENIYQAHQILESNTMIGKLVINLN 338

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302

 Score = 75.3 bits (186), Expect = 3e-16
 Identities = 58/242 (23%), Positives = 94/242 (38%), Gaps = 25/242 (10%)

Query: 3   GWEEYSLVTAPRLFKIQHTDMP--LSYYTG-ILGMPGMTAYAGFFEVCSPKQGEYVFVSA 59
           G  E   V    L  +     P  LS        +  +TAY    +    + GE V V A
Sbjct: 80  GLAERVAVPKGALLPL-----PEGLSPEEAAAFPVSFLTAYLAL-KRAQARPGEKVLVQA 133

Query: 60  ASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFP 119
           A+GA+G    Q A+ +G  V+ +A   +K+ L     G +EA  Y E P+   A      
Sbjct: 134 AAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-ALGAEEAATYAEVPERAKAWG---- 188

Query: 120 EGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEG 179
            G+++  E V GK ++  L  +   GR+   G       +          L+ + + + G
Sbjct: 189 -GLDLVLE-VRGKEVEESLGLLAHGGRLVYIGAAE---GEVAPI--PPLRLMRRNLAVLG 241

Query: 180 FL---VPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVV 236
           F    +     L  + L  ++PR+   ++  V         A AA   L    + GK VV
Sbjct: 242 FWLTPLLREGALVEEALGFLLPRL-GRELRPVVGPVFPFAEAEAAFRALLDRGHTGKVVV 300

Query: 237 EV 238
            +
Sbjct: 301 RL 302

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379

 Score = 75.0 bits (184), Expect = 6e-16
 Identities = 31/165 (18%), Positives = 57/165 (34%), Gaps = 10/165 (6%)

Query: 3   GWEEYSLVTAPRLFKIQHTDMP--LSYYTGI-LGMPGMTAYAGFFEVCSPKQGEYVFVSA 59
            + +Y  + A +   +     P   +   G    +  +TA  G  E    +    +  +A
Sbjct: 126 MYSQYRCIPADQCLVL-----PEGATPADGASSFVNPLTAL-GMVETMRLEGHSALVHTA 179

Query: 60  ASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFP 119
           A+  +GQ++ Q     G  +V     +++ DLLK   G     N      +    +    
Sbjct: 180 AASNLGQMLNQICLKDGIKLVNIVRKQEQADLLK-AQGAVHVCNAASPTFMQDLTEALVS 238

Query: 120 EGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGV 164
            G  I F+  GG  L   +L              S+Y +   + V
Sbjct: 239 TGATIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQV 283

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363

 Score = 67.0 bits (164), Expect = 4e-13
 Identities = 37/224 (16%), Positives = 71/224 (31%), Gaps = 29/224 (12%)

Query: 33  GMP--GMTAYAGFFEV-----CSPKQGEYVFVSAASGAVGQLVGQFAK-LVGCYVVGSAG 84
            +P   +TA+  FF+        P     + +   +G VG +  Q A+      V+ +A 
Sbjct: 146 ALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATAS 205

Query: 85  SKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQ 144
             +  + +K   G     ++  +P               ++      K    +   +  Q
Sbjct: 206 RPETQEWVK-SLGAHHVIDHS-KPLAAEVAALGLGAPAFVFSTTHTDKHAAEIADLIAPQ 263

Query: 145 GRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEG---FLVPDYFHLYP----KFLEMMI 197
           GR  L         D P    ++     K + +     F  P +         + L  + 
Sbjct: 264 GRFCLI--------DDPSA-FDIMLFKRKAVSIHHELMFTRPMFGTPDMSEQGRLLNDVS 314

Query: 198 PRIKEGKIVYVEDKAEGLESA---PAALVGLFSGRNVGKQVVEV 238
             + EG++           +A     A   + SG   GK V+E 
Sbjct: 315 RLVDEGRLRTTLTNRLSPINAANLKQAHALVESGTARGKVVIEG 358

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score = 65.3 bits (160), Expect = 1e-12
 Identities = 45/239 (18%), Positives = 88/239 (36%), Gaps = 23/239 (9%)

Query: 3   GWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASG 62
            + EY +V   +        +        L   G+T Y       S    + + V  A G
Sbjct: 125 AYAEYVIVPHYKYMYKLR-RLNAVE-AAPLTCSGITTYRAV-RKASLDPTKTLLVVGAGG 181

Query: 63  AVGQLVGQFAK-LVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEG 121
            +G +  Q AK + G  ++G    ++ V+  K + G D   N   +  L    +    +G
Sbjct: 182 GLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RAGADYVINASMQDPLAEIRRITESKG 240

Query: 122 INIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGF 180
           ++   +     K L      +  QG+  + G+         +  ++   +    I+  G 
Sbjct: 241 VDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFG------ADLHYHAPLITLSEIQFVGS 294

Query: 181 LV---PDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVV 236
           LV    D+       + +     + GK+  +  K   LE A  A+  L + + +G+QV+
Sbjct: 295 LVGNQSDF----LGIMRL----AEAGKVKPMITKTMKLEEANEAIDNLENFKAIGRQVL 345

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315

 Score = 62.2 bits (152), Expect = 1e-11
 Identities = 31/204 (15%), Positives = 60/204 (29%), Gaps = 17/204 (8%)

Query: 34  MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 93
            P +TA+  F E     +   V +    GAV  L+ Q     G  V     +     L  
Sbjct: 126 CPLLTAWQAF-EKIPLTKQREVLIVGF-GAVNNLLTQMLNNAGYVVDL-VSASLSQALAA 182

Query: 94  NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRI-TLCGM 152
            K G    +    +            +     F+ V  +   A++ +++  G I  +   
Sbjct: 183 -KRGVRHLYREPSQ----------VTQKYFAIFDAVNSQNAAALVPSLKANGHIICIQDR 231

Query: 153 ISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKA 212
           I       P     ++        +  F     + +  +  E ++  I +GK+       
Sbjct: 232 IPA--PIDPAFTRTISYHEIALGALHDFGDRQDWQILMQQGEALLTLIAQGKMEIAAPDI 289

Query: 213 EGLESAPAALVGLFSGRNVGKQVV 236
              E    AL      +      +
Sbjct: 290 FRFEQMIEALDHSEQTKLKTVLTL 313

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 Length = 198

 Score = 53.7 bits (130), Expect = 4e-09
 Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%)

Query: 37  MTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF 96
           +TA+    EV     GE V + +A+G VG      AK++G  +  +AGS  K ++L  + 
Sbjct: 24  LTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS-RL 82

Query: 97  GFDEAFN 103
           G +   +
Sbjct: 83  GVEYVGD 89

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score = 53.0 bits (127), Expect = 3e-08
 Identities = 29/114 (25%), Positives = 48/114 (42%), Gaps = 3/114 (2%)

Query: 37   MTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF 96
             TAY         + GE V + + SG VGQ     A   GC V  + GS +K   L+ +F
Sbjct: 1653 TTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARF 1712

Query: 97   -GFDEA--FNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRI 147
               DE    N ++       L+    +G+++   ++  + L A +  +   GR 
Sbjct: 1713 PQLDETCFANSRDTSFEQHVLRHTAGKGVDLVLNSLAEEKLQASVRCLAQHGRF 1766

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* Length = 324

 Score = 51.9 bits (125), Expect = 4e-08
 Identities = 47/227 (20%), Positives = 73/227 (32%), Gaps = 39/227 (17%)

Query: 28  YTGILGMPGMTAYAGFFEVCS---PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG 84
              I+G  G TA      +       Q   V V+ ASG VG         +G  V   +G
Sbjct: 120 NAMIIGTAGFTAMLCVMALEDAGIRPQDGEVVVTGASGGVGSTAVALLHKLGYQVAAVSG 179

Query: 85  SKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQ 144
            +     LK   G +   +  E  +     K+ +   I    + VG K+L  VL  M   
Sbjct: 180 RESTHGYLK-SLGANRILSRDEFAESRPLEKQLWAGAI----DTVGDKVLAKVLAQMNYG 234

Query: 145 GRITLCGMISQYNNDKPE-------------GVHNLTCLISKRIRMEGFLVPDYFHLYPK 191
           G +  CG+        P              GV ++    ++R      LV D   L   
Sbjct: 235 GCVAACGLAG--GFALPTTVMPFILRNVRLQGVDSVMTPPARRAEAWARLVKD---LPES 289

Query: 192 FLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 238
           F       I              L  AP     + + +  G+ +V++
Sbjct: 290 FYAQAATEI-------------TLADAPKFADAIINNQVQGRTLVKI 323

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348

 Score = 51.4 bits (124), Expect = 6e-08
 Identities = 37/161 (22%), Positives = 65/161 (40%), Gaps = 15/161 (9%)

Query: 48  SPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKE 106
            P  G+ V ++ A G +G L    AK  G   V+ S  S  + +L K K G D   N  E
Sbjct: 164 GPISGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KVGADYVINPFE 221

Query: 107 EPDLDAALKRYF-PEGINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGV 164
           E D+   +       G++++ E  G  K L+  L  +   GR++L G+           +
Sbjct: 222 E-DVVKEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYP-----GKVTI 275

Query: 165 HNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKI 205
                +I K + + G      +  +     ++    + GK+
Sbjct: 276 DFNNLIIFKALTIYGITGRHLWETWYTVSRLL----QSGKL 312

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 Length = 328

 Score = 49.6 bits (119), Expect = 2e-07
 Identities = 52/230 (22%), Positives = 80/230 (34%), Gaps = 42/230 (18%)

Query: 28  YTGILGMPGMTAYAG---FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG 84
               +G  G TA        E     +   V V+ A+G VG L        G  V  S G
Sbjct: 123 EAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTG 182

Query: 85  SKDKVDLLKNKFGFDEAFNYKE--EPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMR 142
              + D L+   G  E    ++     +    K+ +   +    + VGG+ L  VL  MR
Sbjct: 183 KAAEHDYLR-VLGAKEVLAREDVMAERIRPLDKQRWAAAV----DPVGGRTLATVLSRMR 237

Query: 143 IQGRITLCGMISQYNNDKPE-------------GVHNLTCLISKRIRMEGFLVPDYFHLY 189
             G + + G+      + P              G+ ++ C +  R+R+   L  D   L 
Sbjct: 238 YGGAVAVSGLTG--GAEVPTTVHPFILRGVSLLGIDSVYCPMDLRLRIWERLAGD---LK 292

Query: 190 PKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVA 239
           P  LE +   I              L   P AL  +  G   G+ VV +A
Sbjct: 293 PD-LERIAQEI-------------SLAELPQALKRILRGELRGRTVVRLA 328

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404

 Score = 49.3 bits (118), Expect = 4e-07
 Identities = 42/239 (17%), Positives = 85/239 (35%), Gaps = 13/239 (5%)

Query: 6   EYSLVTAPRLFKI----QHTDMPLSYYTGILGMPGMTAY-AGFFEVCSPKQGEYVFVSAA 60
           EY  V A   + +       +    +  G L  P   AY A        + G+ V +   
Sbjct: 163 EYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGG 222

Query: 61  SGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFP 119
            G +G       K  G   V+ S  S+ + +L K + G D   +  +E  ++A L     
Sbjct: 223 -GPIGLAAVAILKHAGASKVILSEPSEVRRNLAK-ELGADHVIDPTKENFVEAVLDYTNG 280

Query: 120 EGINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRME 178
            G  ++ E  G  +++   +  +  + R     +      D    +        +R ++ 
Sbjct: 281 LGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADAKIPL-TGEVFQVRRAQIV 339

Query: 179 GFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVE 237
           G         +P+ + +M   +   KI+    K   +E  P  +  L + +++ K  + 
Sbjct: 340 GSQGHSGHGTFPRVISLMASGMDMTKII---SKTVSMEEIPEYIKRLQTDKSLVKVTML 395

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* Length = 330

 Score = 48.5 bits (116), Expect = 5e-07
 Identities = 48/229 (20%), Positives = 87/229 (37%), Gaps = 40/229 (17%)

Query: 28  YTGILGMPGMTAYAGFFEVCS---PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG 84
              + G  G TA      +       +   V V+ A+G VG +        G  VV S G
Sbjct: 124 EAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTG 183

Query: 85  SKDKVDLLKNKFGFDEAFNYKE--EPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMR 142
           +++  D LK + G  E  + ++  +  L A  K+ +   +    + VGGK L ++L  ++
Sbjct: 184 NREAADYLK-QLGASEVISREDVYDGTLKALSKQQWQGAV----DPVGGKQLASLLSKIQ 238

Query: 143 IQGRITLCGMISQYNNDKPE-------------GVHNLTCLISKRIRMEGFLVPDYFHLY 189
             G + + G+      + P              G+ ++ C +  R  +   +  D   L 
Sbjct: 239 YGGSVAVSGLTG--GGEVPATVYPFILRGVSLLGIDSVYCPMDVRAAVWERMSSD---LK 293

Query: 190 PKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 238
           P  L  ++ R               LE  P AL  +   R  G+ +V++
Sbjct: 294 PDQLLTIVDREV------------SLEETPGALKDILQNRIQGRVIVKL 330

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343

 Score = 48.3 bits (116), Expect = 6e-07
 Identities = 26/158 (16%), Positives = 57/158 (36%), Gaps = 15/158 (9%)

Query: 50  KQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEP 108
             G+ V ++ A G +G +     +  G   ++ S  +  ++   +  +  D   N  EE 
Sbjct: 163 VSGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFAR-PYA-DRLVNPLEE- 218

Query: 109 DLDAALKRYFPEGINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNL 167
           DL   ++R    G+ +  E  G    +   L+ +   G   + G+ S      P      
Sbjct: 219 DLLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMALIPGGEARILGIPS-----DPIRFDLA 273

Query: 168 TCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKI 205
             L+ + I   G      +  + +   ++      G++
Sbjct: 274 GELVMRGITAFGIAGRRLWQTWMQGTALV----YSGRV 307

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380

 Score = 48.4 bits (116), Expect = 6e-07
 Identities = 40/211 (18%), Positives = 71/211 (33%), Gaps = 18/211 (8%)

Query: 1   MTGWEEYSLVTAPR-LFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSA 59
              +  + ++     + K+      L     +    G TAY  F E      G+ V +  
Sbjct: 146 RGCYSSHIVLDPETDVLKV-SEKDDLDV-LAMAMCSGATAYHAFDEYPESFAGKTVVIQG 203

Query: 60  ASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEP--DLDAALKR 116
           A G +G      A+ +G   V+  AGS +++ L + + G D   N +E    +   A+  
Sbjct: 204 A-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EIGADLTLNRRETSVEERRKAIMD 261

Query: 117 YF-PEGINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKR 174
                G +   E  G  + L      +R  G  ++ G+        P        L+ K 
Sbjct: 262 ITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVA---VPQDPVPFKVYEWLVLKN 318

Query: 175 IRMEGFLVPDYFHLYPKFLEMMIPRIKEGKI 205
              +G  V D  H   K + +          
Sbjct: 319 ATFKGIWVSDTSHF-VKTVSIT----SRNYQ 344

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score = 48.2 bits (115), Expect = 9e-07
 Identities = 15/55 (27%), Positives = 26/55 (47%)

Query: 37  MTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDL 91
           +TAY    ++   + GE + V +A+G VG    Q A+ +G  V  +A       +
Sbjct: 331 LTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASEDKWQAV 385

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score = 46.1 bits (110), Expect = 3e-06
 Identities = 28/159 (17%), Positives = 52/159 (32%), Gaps = 7/159 (4%)

Query: 49  PKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEE 107
             + + V +  A G +G L  Q A  +G   V     S +K+ L K  FG  + FN  E 
Sbjct: 158 GCENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLALAK-SFGAMQTFNSSEM 215

Query: 108 PDLDAALKRYFPEGINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHN 166
                           +  E  G  + ++  +       ++ L G     + D       
Sbjct: 216 SAPQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPHAQLALVGT---LHQDLHLTSAT 272

Query: 167 LTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKI 205
              ++ K + + G  +        +  E     + E K+
Sbjct: 273 FGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKL 311

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370

 Score = 44.5 bits (106), Expect = 1e-05
 Identities = 31/164 (18%), Positives = 63/164 (38%), Gaps = 22/164 (13%)

Query: 49  PKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEE 107
            K G  V +    G +G L  Q A+L G   V+ S     K  L + + G     +    
Sbjct: 180 IKAGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLAE-EVGATATVDPSAG 237

Query: 108 PDLDAALKRYF---PEGINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEG 163
            D+  A+       P G+++  E  G  + +       +  G + + G++      + E 
Sbjct: 238 -DVVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLP-----QGEK 291

Query: 164 VH-NLTCLISKRIRMEG-FLVPDYFHLYPKFLEMMIPRIKEGKI 205
           V      ++ + +R+ G F+ P    ++ +  +++      G I
Sbjct: 292 VEIEPFDILFRELRVLGSFINP---FVHRRAADLV----ATGAI 328

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345

 Score = 43.8 bits (104), Expect = 2e-05
 Identities = 45/251 (17%), Positives = 78/251 (31%), Gaps = 48/251 (19%)

Query: 3   GWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSP-KQGEYVFVSAAS 61
              EY +V + R         P++     L   G+T Y     V      G    V    
Sbjct: 124 SMAEYMIVDSARHLVPIGDLDPVA--AAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGV- 180

Query: 62  GAVGQLVGQFAKLVGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE 120
           G +G +  Q  + V    V+      D++ L + + G D A           A++     
Sbjct: 181 GGLGHVGIQILRAVSAARVIAVDLDDDRLALAR-EVGADAAVKSGA--GAADAIR----- 232

Query: 121 GINIYFENVGGKMLDAVL------------LNM-RIQGRITLCGMISQYNNDKPEGVHNL 167
                 E  GG+   AV               +  + G I++ G+          G H  
Sbjct: 233 ------ELTGGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGI--------HAGAHAK 278

Query: 168 TC--LISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGL 225
               +I     +          L  + + +     + G++  +  +   L+  PAA   L
Sbjct: 279 VGFFMIPFGASVVTPYWGTRSEL-MEVVALA----RAGRLD-IHTETFTLDEGPAAYRRL 332

Query: 226 FSGRNVGKQVV 236
             G   G+ VV
Sbjct: 333 REGSIRGRGVV 343

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344

 Score = 43.0 bits (102), Expect = 4e-05
 Identities = 48/244 (19%), Positives = 75/244 (30%), Gaps = 32/244 (13%)

Query: 3   GWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAG---FFEVCSPKQGEYVFVSA 59
           G+ EY LV + R     +  +        L   G T+           S      V V+ 
Sbjct: 121 GFSEYMLVKSSRWLVKLN-SLSPVE-AAPLADAGTTSMGAIRQALPFISKFAEPVVIVNG 178

Query: 60  ASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRY 117
             G +     Q  K +     +VG + SK   D    + G D     K+   L   L   
Sbjct: 179 I-GGLAVYTIQILKALMKNITIVGISRSKKHRDFAL-ELGADYVSEMKDAESLINKLTD- 235

Query: 118 FPEGINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVH-NLTCLISKRI 175
              G +I  + VG  +    +   +  +G I L GM         + V            
Sbjct: 236 -GLGASIAIDLVGTEETTYNLGKLLAQEGAIILVGME-------GKRVSLEAFDTAVWNK 287

Query: 176 RMEGFLV---PDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVG 232
           ++ G       D        + +     + GKI         L+    A   L  GR  G
Sbjct: 288 KLLGSNYGSLNDL----EDVVRL----SESGKIK-PYIIKVPLDDINKAFTNLDEGRVDG 338

Query: 233 KQVV 236
           +QV+
Sbjct: 339 RQVI 342

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347

 Score = 41.8 bits (99), Expect = 9e-05
 Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 20/154 (12%)

Query: 36  GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK 95
           G+T Y    +  +   G +V +S A+G +G L  Q+AK +G  V+G  G + K +L +  
Sbjct: 155 GITVYKAL-KSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFR-S 212

Query: 96  FGFDEAFNYKEEPDLDAALKRYFPEG----INIYFENVGGKMLDAVLLNMRIQGRITLCG 151
            G +   ++ +E D+  A+ +    G    IN+    V    ++A    +R  G   L G
Sbjct: 213 IGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVS---VSEAAIEASTRYVRANGTTVLVG 269

Query: 152 MISQYNNDKPEGVH---NLTCLISKRIRMEGFLV 182
           M        P G     ++   + K I + G  V
Sbjct: 270 M--------PAGAKCCSDVFNQVVKSISIVGSYV 295

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	241
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	100.0
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	100.0
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	100.0
4eye_A	342	Probable oxidoreductase; structural genomics, niai	100.0
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	100.0
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	100.0
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	100.0
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	100.0
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	100.0
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	100.0
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	100.0
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	100.0
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	100.0
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	100.0
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	100.0
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	100.0
3gms_A	340	Putative NADPH:quinone reductase; structural genom	100.0
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	100.0
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	100.0
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	100.0
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	100.0
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	100.0
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	100.0
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	100.0
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	100.0
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	100.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	100.0
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	100.0
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	100.0
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	100.0
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	100.0
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	100.0
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	100.0
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	100.0
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	100.0
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	100.0
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	100.0
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	100.0
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	100.0
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	100.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	100.0
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	100.0
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	100.0
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	100.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	100.0
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	100.0
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	100.0
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	100.0
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	100.0
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	100.0
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	100.0
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	100.0
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	100.0
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	100.0
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	100.0
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	100.0
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	100.0
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	100.0
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	100.0
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	100.0
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	100.0
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	100.0
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	100.0
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	100.0
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	100.0
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	100.0
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	100.0
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	100.0
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	99.95
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	99.2
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	99.09
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	99.07
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	98.99
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	98.97
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	98.84
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	98.77
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	98.64
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	98.59
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	98.59
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	98.53
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	98.46
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.41
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	98.37
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	98.32
2yvl_A	248	TRMI protein, hypothetical protein; tRNA, methyltr	98.32
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	98.29
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	98.28
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	98.28
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	98.26
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	98.25
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	98.25
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	98.23
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	98.23
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	98.23
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	98.22
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	98.22
4dqx_A	277	Probable oxidoreductase protein; structural genomi	98.22
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	98.21
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	98.21
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	98.21
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	98.2
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	98.2
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	98.2
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	98.19
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	98.19
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	98.18
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	98.18
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	98.18
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	98.17
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	98.17
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	98.17
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	98.17
3imf_A	257	Short chain dehydrogenase; structural genomics, in	98.16
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	98.16
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	98.15
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	98.15
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	98.14
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	98.14
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	98.13
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	98.13
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	98.13
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	98.13
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	98.13
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	98.12
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	98.12
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	98.12
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	98.12
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	98.11
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	98.11
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	98.1
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	98.1
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	98.1
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	98.1
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	98.1
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	98.1
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	98.1
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	98.1
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.1
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	98.1
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	98.1
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	98.09
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	98.09
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	98.09
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	98.09
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	98.08
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	98.08
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	98.08
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	98.08
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	98.08
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	98.08
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	98.07
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	98.07
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	98.07
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	98.07
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	98.06
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	98.06
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	98.06
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	98.06
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	98.06
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	98.05
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	98.05
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	98.05
3rih_A	293	Short chain dehydrogenase or reductase; structural	98.05
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	98.04
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	98.04
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	98.04
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	98.04
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	98.04
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	98.03
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	98.03
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	98.03
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	98.03
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	98.03
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.03
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	98.03
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	98.03
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	98.03
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	98.03
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	98.03
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	98.02
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	98.02
3cxt_A	291	Dehydrogenase with different specificities; rossma	98.02
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	98.02
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	98.02
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	98.02
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	98.02
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	98.01
1spx_A	278	Short-chain reductase family member (5L265); paral	98.0
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	98.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	98.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	98.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	98.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	97.99
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	97.99
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	97.99
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	97.99
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	97.99
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.98
1xkq_A	280	Short-chain reductase family member (5D234); parra	97.98
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	97.98
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	97.98
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	97.97
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	97.96
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	97.96
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	97.96
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	97.96
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	97.96
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	97.95
1xhl_A	297	Short-chain dehydrogenase/reductase family member	97.95
1xq1_A	266	Putative tropinone reducatse; structural genomics,	97.94
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	97.94
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	97.93
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	97.93
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	97.93
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	97.92
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	97.92
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	97.92
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	97.91
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	97.91
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	97.91
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	97.91
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	97.91
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	97.9
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	97.9
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	97.9
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	97.89
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	97.89
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	97.89
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	97.89
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	97.89
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	97.88
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	97.88
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.88
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	97.88
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	97.88
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	97.87
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	97.87
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	97.86
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	97.86
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.86
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	97.86
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	97.86
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	97.85
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	97.85
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	97.85
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	97.85
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	97.84
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	97.84
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.84
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	97.84
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	97.84
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	97.84
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	97.84
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	97.83
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	97.83
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	97.83
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	97.81
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	97.81
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	97.81
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	97.81
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	97.79
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	97.79
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	97.79
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	97.78
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.78
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	97.77
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	97.77
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	97.76
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	97.76
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	97.76
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	97.75
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	97.74
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	97.74
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.74
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	97.73
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	97.73
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	97.73
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	97.73
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	97.72
3dr5_A	221	Putative O-methyltransferase; Q8NRD3, CGL1119, PF0	97.71
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	97.71
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	97.7
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	97.69
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.69
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	97.68
1xq6_A	253	Unknown protein; structural genomics, protein stru	97.68
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	97.68
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	97.68
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	97.68
1p91_A	269	Ribosomal RNA large subunit methyltransferase A; R	97.66
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	97.66
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	97.65
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	97.65
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	97.63
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	97.63
3hem_A	302	Cyclopropane-fatty-acyl-phospholipid synthase 2; p	97.62
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.62
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	97.62
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	97.62
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	97.61
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	97.6
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	97.59
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	97.59
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	97.58
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	97.57
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	97.57
2gpy_A	233	O-methyltransferase; structural genomics, PSI, pro	97.56
1o54_A	277	SAM-dependent O-methyltransferase; TM0748, structu	97.56
3mb5_A	255	SAM-dependent methyltransferase; RNA methyltransfe	97.56
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	97.56
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	97.55
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	97.55
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	97.53
3tfw_A	248	Putative O-methyltransferase; PSI-biology, nysgrc,	97.53
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	97.53
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	97.52
2hnk_A	239	SAM-dependent O-methyltransferase; modified rossma	97.52
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	97.52
3ujc_A	266	Phosphoethanolamine N-methyltransferase; parasite;	97.52
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	97.52
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	97.5
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	97.5
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	97.49
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	97.49
3hm2_A	178	Precorrin-6Y C5,15-methyltransferase; alpha-beta-s	97.48
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	97.48
2yxe_A	215	Protein-L-isoaspartate O-methyltransferase; rossma	97.48
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	97.47
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	97.47
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	97.47
2fk8_A	318	Methoxy mycolic acid synthase 4; S-adenosylmethion	97.46
2nyu_A	196	Putative ribosomal RNA methyltransferase 2; SAM, s	97.46
3lbf_A	210	Protein-L-isoaspartate O-methyltransferase; modifi	97.45
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	97.45
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	97.45
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.44
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	97.43
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.43
3cbg_A	232	O-methyltransferase; cyanobacterium; HET: SAH FER	97.42
1jg1_A	235	PIMT;, protein-L-isoaspartate O-methyltransferase;	97.42
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	97.41
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	97.4
2pwy_A	258	TRNA (adenine-N(1)-)-methyltransferase; mtase, ado	97.4
3c3y_A	237	Pfomt, O-methyltransferase; plant secondary metabo	97.4
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	97.39
1sui_A	247	Caffeoyl-COA O-methyltransferase; rossmann fold, p	97.37
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	97.37
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	97.36
2avd_A	229	Catechol-O-methyltransferase; structural genomics,	97.36
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	97.36
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	97.36
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.35
3duw_A	223	OMT, O-methyltransferase, putative; alternating of	97.33
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	97.33
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	97.33
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	97.32
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.32
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	97.31
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	97.31
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	97.3
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	97.3
2nxc_A	254	L11 mtase, ribosomal protein L11 methyltransferase	97.3
3tr6_A	225	O-methyltransferase; cellular processes; HET: SAH;	97.29
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	97.29
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	97.29
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	97.28
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.28
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	97.28
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	97.27
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	97.27
3mti_A	185	RRNA methylase; SAM-dependent, PSI, MCSG, structur	97.27
1kpg_A	287	CFA synthase;, cyclopropane-fatty-acyl-phospholipi	97.27
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	97.27
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	97.26
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	97.26
3eey_A	197	Putative rRNA methylase; rRNA methylation, S-adeno	97.25
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	97.25
1i9g_A	280	Hypothetical protein RV2118C; mtase, adoMet, cryst	97.25
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	97.24
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	97.24
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	97.23
3orh_A	236	Guanidinoacetate N-methyltransferase; structura ge	97.22
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.22
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	97.22
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	97.21
4df3_A	233	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	97.21
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	97.2
3vc1_A	312	Geranyl diphosphate 2-C-methyltransferase; rossman	97.2
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	97.19
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	97.19
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	97.18
3l07_A	285	Bifunctional protein fold; structural genomics, ID	97.18
3grz_A	205	L11 mtase, ribosomal protein L11 methyltransferase	97.17
1nkv_A	256	Hypothetical protein YJHP; structural genomics, PS	97.16
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	97.15
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	97.15
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	97.14
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	97.14
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.14
2b25_A	336	Hypothetical protein; structural genomics, methyl	97.14
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.13
1l3i_A	192	Precorrin-6Y methyltransferase/putative decarboxyl	97.13
4e4y_A	244	Short chain dehydrogenase family protein; structur	97.13
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	97.13
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	97.13
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	97.13
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	97.12
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	97.12
3cea_A	346	MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore	97.12
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	97.09
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.09
1yb2_A	275	Hypothetical protein TA0852; structural genomics,	97.08
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	97.08
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	97.08
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	97.08
3dli_A	240	Methyltransferase; PSI-II, NYSGXRC, structural gen	97.07
3ou2_A	218	SAM-dependent methyltransferase; O-methyltransfera	97.07
2o57_A	297	Putative sarcosine dimethylglycine methyltransfera	97.06
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	97.06
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.06
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	97.05
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	97.05
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	97.04
3gjy_A	317	Spermidine synthase; APC62791, structural genomics	97.04
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	97.03
1vbf_A	231	231AA long hypothetical protein-L-isoaspartate O-	97.02
3u81_A	221	Catechol O-methyltransferase; neurotransmitter deg	97.02
1mjf_A	281	Spermidine synthase; spermidine synthetase, struct	97.01
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	97.0
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	96.99
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	96.99
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	96.99
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	96.96
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	96.96
2pbf_A	227	Protein-L-isoaspartate O-methyltransferase beta-A	96.96
2glx_A	332	1,5-anhydro-D-fructose reductase; NADP(H) dependen	96.96
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	96.96
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	96.94
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	96.94
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	96.94
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	96.94
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	96.94
4gek_A	261	TRNA (CMO5U34)-methyltransferase; structural genom	96.94
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	96.93
3f4k_A	257	Putative methyltransferase; structural genomics, P	96.93
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	96.92
2b2c_A	314	Spermidine synthase; beta-alpha, transferase; 2.50	96.92
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	96.92
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	96.91
1dl5_A	317	Protein-L-isoaspartate O-methyltransferase; isoasp	96.91
3iv6_A	261	Putative Zn-dependent alcohol dehydrogenase; alpha	96.9
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	96.9
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	96.9
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	96.89
3bwc_A	304	Spermidine synthase; SAM, SGPP, structura genomics	96.89
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	96.87
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	96.87
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	96.87
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.87
1vl6_A	388	Malate oxidoreductase; TM0542, NAD-dependent malic	96.86
3bus_A	273	REBM, methyltransferase; rebeccamycin synthesis; H	96.86
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.85
1xj5_A	334	Spermidine synthase 1; structural genomics, protei	96.85
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	96.85
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	96.85
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	96.84
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	96.84
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	96.84
1vl5_A	260	Unknown conserved protein BH2331; putative methylt	96.84
2d0i_A	333	Dehydrogenase; structural genomics, NPPSFA, nation	96.83
3uwp_A	438	Histone-lysine N-methyltransferase, H3 lysine-79;	96.83
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	96.83
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	96.82
3kkz_A	267	Uncharacterized protein Q5LES9; putative methyltra	96.81
1i1n_A	226	Protein-L-isoaspartate O-methyltransferase; S-aden	96.81
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	96.81
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.81
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	96.81
3m33_A	226	Uncharacterized protein; structural genomics, PSI-	96.8
3q2i_A	354	Dehydrogenase; rossmann fold, UDP-sugar binding, N	96.8
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	96.8
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	96.8
4hkt_A	331	Inositol 2-dehydrogenase; structural genomics, nys	96.79
3e9m_A	330	Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA,	96.79
1r18_A	227	Protein-L-isoaspartate(D-aspartate)-O-methyltrans;	96.79
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	96.78
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	96.78
2o07_A	304	Spermidine synthase; structural genomics, structur	96.78
3bkw_A	243	MLL3908 protein, S-adenosylmethionine dependent me	96.78
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	96.76
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.75
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	96.74
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.73
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	96.72
3hnr_A	220	Probable methyltransferase BT9727_4108; structural	96.72
2gb4_A	252	Thiopurine S-methyltransferase; 18204406, thiopuri	96.72
2i7c_A	283	Spermidine synthase; transferase, structural genom	96.72
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	96.71

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=100.00  E-value=5.1e-39  Score=259.67  Aligned_cols=230  Identities=21%  Similarity=0.279  Sum_probs=204.8

Q ss_pred             CCccceEEeec-CCceeeecCCCCCcchh---hhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcC
Q 026217            1 MTGWEEYSLVT-APRLFKIQHTDMPLSYY---TGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVG   76 (241)
Q Consensus         1 ~G~~ae~~~v~-~~~~~~i~P~~~~~~~~---~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g   76 (241)
                      .|+|+||++++ ++.++++ |++++.. +   +|++++.++|||+++.+.+++++|++|||+||+|++|++++|+++..|
T Consensus        96 ~G~~aey~~v~~~~~~~~~-P~~~~~~-~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~G  173 (334)
T 3qwb_A           96 NSTFAQYSKISSQGPVMKL-PKGTSDE-ELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKG  173 (334)
T ss_dssp             SSCSBSEEEEETTSSEEEC-CTTCCHH-HHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHTT
T ss_pred             CCcceEEEEecCcceEEEC-CCCCCHH-HhhhhhhhhhHHHHHHHHHHHhccCCCCCEEEEECCCCHHHHHHHHHHHHCC
Confidence            48999999999 9999999 9996555 4   578899999999999888899999999999999999999999999999


Q ss_pred             CEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEeeecc
Q 026217           77 CYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQ  155 (241)
Q Consensus        77 ~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~  155 (241)
                      ++|+++++++++++.++ ++|+++++|+++. ++.+.+++.+++ ++|++|||+|+..+..++++++++|+++.+|...+
T Consensus       174 a~Vi~~~~~~~~~~~~~-~~ga~~~~~~~~~-~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~  251 (334)
T 3qwb_A          174 AHTIAVASTDEKLKIAK-EYGAEYLINASKE-DILRQVLKFTNGKGVDASFDSVGKDTFEISLAALKRKGVFVSFGNASG  251 (334)
T ss_dssp             CEEEEEESSHHHHHHHH-HTTCSEEEETTTS-CHHHHHHHHTTTSCEEEEEECCGGGGHHHHHHHEEEEEEEEECCCTTC
T ss_pred             CEEEEEeCCHHHHHHHH-HcCCcEEEeCCCc-hHHHHHHHHhCCCCceEEEECCChHHHHHHHHHhccCCEEEEEcCCCC
Confidence            99999999999999999 9999999999887 999999999877 99999999999999999999999999999987432


Q ss_pred             cCCCCCCCccChHHHhhcceEEEEeecccc---cchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcc
Q 026217          156 YNNDKPEGVHNLTCLISKRIRMEGFLVPDY---FHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVG  232 (241)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~g  232 (241)
                           .....+...++.+++++.++....+   ++...+.++++++++.+|++++.++++||++++++||+.+++++..|
T Consensus       252 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~g  326 (334)
T 3qwb_A          252 -----LIPPFSITRLSPKNITLVRPQLYGYIADPEEWKYYSDEFFGLVNSKKLNIKIYKTYPLRDYRTAAADIESRKTVG  326 (334)
T ss_dssp             -----CCCCBCGGGGTTTTCEEECCCGGGGSCSHHHHHHHHHHHHHHHHTTSSCCCEEEEEEGGGHHHHHHHHHTTCCCB
T ss_pred             -----CCCCcchhhhhhCceEEEEEEeccccCCHHHHHHHHHHHHHHHHCCCccCceeeEEcHHHHHHHHHHHHhCCCce
Confidence                 2234556677889999998776554   34455677899999999999999999999999999999999999999


Q ss_pred             eEEEEec
Q 026217          233 KQVVEVA  239 (241)
Q Consensus       233 k~vv~~~  239 (241)
                      |+|++++
T Consensus       327 Kvvi~~~  333 (334)
T 3qwb_A          327 KLVLEIP  333 (334)
T ss_dssp             EEEEECC
T ss_pred             EEEEecC
Confidence            9999985

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=100.00  E-value=1e-38  Score=258.17  Aligned_cols=233  Identities=45%  Similarity=0.769  Sum_probs=205.2

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhh--hhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYT--GILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYV   79 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~--a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v   79 (241)
                      |+|+||+++|++.++++ |++++.. ++  |+++++++|||+++.+.+++++|++|||+||+|++|++++|+++..|++|
T Consensus       100 G~~aey~~v~~~~~~~~-P~~~~~~-~~a~a~l~~~~~tA~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~V  177 (336)
T 4b7c_A          100 LGVQDYFIGEPKGFYKV-DPSRAPL-PRYLSALGMTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRV  177 (336)
T ss_dssp             CCSBSEEEECCTTCEEE-CTTTSCG-GGGGTTTSHHHHHHHHHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEE
T ss_pred             CCceEEEEechHHeEEc-CCCCCch-HHHhhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEE
Confidence            89999999999999999 9885333 33  78999999999999888999999999999999999999999999999999


Q ss_pred             EEEeCCHHHHHHH-HHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCC
Q 026217           80 VGSAGSKDKVDLL-KNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNN  158 (241)
Q Consensus        80 ~~~~~~~~~~~~~-~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~  158 (241)
                      +++++++++.+.+ + ++|+++++|+++. ++.+.+++.+++++|++|||+|++.+..++++++++|+++.+|.......
T Consensus       178 i~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~  255 (336)
T 4b7c_A          178 VGIAGGAEKCRFLVE-ELGFDGAIDYKNE-DLAAGLKRECPKGIDVFFDNVGGEILDTVLTRIAFKARIVLCGAISQYNN  255 (336)
T ss_dssp             EEEESSHHHHHHHHH-TTCCSEEEETTTS-CHHHHHHHHCTTCEEEEEESSCHHHHHHHHTTEEEEEEEEECCCGGGGC-
T ss_pred             EEEeCCHHHHHHHHH-HcCCCEEEECCCH-HHHHHHHHhcCCCceEEEECCCcchHHHHHHHHhhCCEEEEEeecccccC
Confidence            9999999999999 6 9999999999887 89999999886699999999999899999999999999999987553211


Q ss_pred             -CCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEEE
Q 026217          159 -DKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVE  237 (241)
Q Consensus       159 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv~  237 (241)
                       .......+...++.+++++.++....+.....+.++++++++.+|.+++.+..++|++++++||+.+.+++..||+|++
T Consensus       256 ~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvi~  335 (336)
T 4b7c_A          256 KEAVRGPANYLSLLVNRARMEGMVVMDYAQRFPEGLKEMATWLAEGKLQSREDIVEGLETFPETLLKLFSGENFGKLVLK  335 (336)
T ss_dssp             -----CCTTTTHHHHTTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSCCCEEEEECGGGHHHHHHHHHTTCCCSEEEEE
T ss_pred             CcccccchhHHHHHhCCcEEEEEEhhhhhhhhHHHHHHHHHHHHCCCcccceeeecCHHHHHHHHHHHHcCCCCceEEEe
Confidence             1112245566788999999999887765556789999999999999999988889999999999999999999999997


Q ss_pred             e
Q 026217          238 V  238 (241)
Q Consensus       238 ~  238 (241)
                      +
T Consensus       336 ~  336 (336)
T 4b7c_A          336 V  336 (336)
T ss_dssp             C
T ss_pred             C
Confidence            5

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=100.00  E-value=2.9e-39  Score=263.74  Aligned_cols=221  Identities=24%  Similarity=0.289  Sum_probs=199.8

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVG   81 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~   81 (241)
                      |+|+||+++|++.++++ |++++.. ++|+++++++|||+++.+.+++++|++|||+| +|++|++++|+|+..|++|++
T Consensus       142 G~~aey~~v~~~~~~~i-P~~~~~~-~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~  218 (363)
T 3uog_A          142 GVLSEYVVLPEGWFVAA-PKSLDAA-EASTLPCAGLTAWFALVEKGHLRAGDRVVVQG-TGGVALFGLQIAKATGAEVIV  218 (363)
T ss_dssp             CCCBSEEEEEGGGEEEC-CTTSCHH-HHHTTTTHHHHHHHHHTTTTCCCTTCEEEEES-SBHHHHHHHHHHHHTTCEEEE
T ss_pred             CcceeEEEechHHeEEC-CCCCCHH-HHhhcccHHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEE
Confidence            89999999999999999 9995554 47889999999999998888999999999999 699999999999999999999


Q ss_pred             EeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCCC
Q 026217           82 SAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDK  160 (241)
Q Consensus        82 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~  160 (241)
                      ++++++++++++ ++|+++++|.+.. ++.+.+++.+++ ++|++|||+|+..+..++++++++|+++.+|....     
T Consensus       219 ~~~~~~~~~~~~-~lGa~~vi~~~~~-~~~~~v~~~~~g~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~-----  291 (363)
T 3uog_A          219 TSSSREKLDRAF-ALGADHGINRLEE-DWVERVYALTGDRGADHILEIAGGAGLGQSLKAVAPDGRISVIGVLEG-----  291 (363)
T ss_dssp             EESCHHHHHHHH-HHTCSEEEETTTS-CHHHHHHHHHTTCCEEEEEEETTSSCHHHHHHHEEEEEEEEEECCCSS-----
T ss_pred             EecCchhHHHHH-HcCCCEEEcCCcc-cHHHHHHHHhCCCCceEEEECCChHHHHHHHHHhhcCCEEEEEecCCC-----
Confidence            999999999999 9999999996556 899999999887 99999999999899999999999999999987442     


Q ss_pred             CCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEEEe
Q 026217          161 PEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  238 (241)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv~~  238 (241)
                      .....+...++.+++++.++....     .+.++++++++.+|.+++.++++|||+++++||+.+.+++ .||+|+++
T Consensus       292 ~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~-~gKvvi~~  363 (363)
T 3uog_A          292 FEVSGPVGPLLLKSPVVQGISVGH-----RRALEDLVGAVDRLGLKPVIDMRYKFTEVPEALAHLDRGP-FGKVVIEF  363 (363)
T ss_dssp             CEECCBTTHHHHTCCEEEECCCCC-----HHHHHHHHHHHHHHTCCCCEEEEEEGGGHHHHHHTGGGCC-SBEEEEEC
T ss_pred             cccCcCHHHHHhCCcEEEEEecCC-----HHHHHHHHHHHHcCCCccceeeEEcHHHHHHHHHHHHcCC-CccEEEeC
Confidence            123455667889999999998765     7789999999999999999999999999999999999999 89999975

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=100.00  E-value=2.6e-39  Score=262.02  Aligned_cols=227  Identities=18%  Similarity=0.240  Sum_probs=196.4

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEE
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVV   80 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~   80 (241)
                      .|+|+||++++++.++++ |++++.. ++|+++++++|||+++.+.+++++|++|||+||+|++|++++|+|+..|++|+
T Consensus       111 ~G~~aey~~v~~~~~~~i-P~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi  188 (342)
T 4eye_A          111 IGGYAERVAVAPSNILPT-PPQLDDA-EAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVI  188 (342)
T ss_dssp             SCCSBSEEEECGGGEEEC-CTTSCHH-HHHHHTTHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEE
T ss_pred             CCcceEEEEEcHHHeEEC-CCCCCHH-HHHHhhhHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEE
Confidence            489999999999999999 9995544 37799999999999998888999999999999999999999999999999999


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNND  159 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~  159 (241)
                      ++++++++.+.++ ++|++.+++++ . ++.+.+++.+++ ++|++|||+|++.+..++++++++|+++.+|...+.   
T Consensus       189 ~~~~~~~~~~~~~-~~ga~~v~~~~-~-~~~~~v~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~---  262 (342)
T 4eye_A          189 AVVNRTAATEFVK-SVGADIVLPLE-E-GWAKAVREATGGAGVDMVVDPIGGPAFDDAVRTLASEGRLLVVGFAAGG---  262 (342)
T ss_dssp             EEESSGGGHHHHH-HHTCSEEEESS-T-THHHHHHHHTTTSCEEEEEESCC--CHHHHHHTEEEEEEEEEC---------
T ss_pred             EEeCCHHHHHHHH-hcCCcEEecCc-h-hHHHHHHHHhCCCCceEEEECCchhHHHHHHHhhcCCCEEEEEEccCCC---
Confidence            9999999999999 99999999998 6 899999999988 999999999999999999999999999999874421   


Q ss_pred             CCCCccChHHHhhcceEEEEeecccc----cchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEE
Q 026217          160 KPEGVHNLTCLISKRIRMEGFLVPDY----FHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQV  235 (241)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~v  235 (241)
                        ....+...++.+++++.++....+    ++...+.++.+++++.+| +++.++++||++++++|++.+.+++..||+|
T Consensus       263 --~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g-l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvv  339 (342)
T 4eye_A          263 --IPTIKVNRLLLRNASLIGVAWGEFLRTHADYLYETQAGLEKLVAEG-MRPPVSARIPLSEGRQALQDFADGKVYGKMV  339 (342)
T ss_dssp             ------CCCCGGGTTCEEEECCHHHHHHHCTTHHHHHHHHHHHHHHTT-CCCCEEEEEEGGGHHHHHHHHHTTCCCSEEE
T ss_pred             --CCccCHHHHhhcCCEEEEEehhhhhhcCHHHHHHHHHHHHHHHHcC-CCCCcceEEeHHHHHHHHHHHHhCCCCceEE
Confidence              123444567889999999886543    444567899999999999 9999999999999999999999999999999


Q ss_pred             EEe
Q 026217          236 VEV  238 (241)
Q Consensus       236 v~~  238 (241)
                      +++
T Consensus       340 l~P  342 (342)
T 4eye_A          340 LVP  342 (342)
T ss_dssp             EEC
T ss_pred             EeC
Confidence            974

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=100.00  E-value=3.5e-39  Score=262.33  Aligned_cols=229  Identities=21%  Similarity=0.359  Sum_probs=202.1

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEE
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVV   80 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~   80 (241)
                      .|+|+||+++|++.++++ |++++.. ++|+++++++|||+++.+.+++++|++|||+||+|++|++++|+++..|++|+
T Consensus       119 ~G~~aey~~v~~~~~~~~-P~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi  196 (353)
T 4dup_A          119 GGAYAEYCLLPAGQILPF-PKGYDAV-KAAALPETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVY  196 (353)
T ss_dssp             SCCSBSEEEEEGGGEEEC-CTTCCHH-HHHTSHHHHHHHHHHHTTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEE
T ss_pred             CCceeeEEEEcHHHcEeC-CCCCCHH-HHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEE
Confidence            489999999999999999 9995544 37789999999999998889999999999999999999999999999999999


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCCC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDK  160 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~  160 (241)
                      ++++++++.+.++ ++|++.++|+++. ++.+.+++.+++++|++|||+|++.+..++++++++|+++.+|...+     
T Consensus       197 ~~~~~~~~~~~~~-~lGa~~~~~~~~~-~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~iv~~g~~~~-----  269 (353)
T 4dup_A          197 ATAGSTGKCEACE-RLGAKRGINYRSE-DFAAVIKAETGQGVDIILDMIGAAYFERNIASLAKDGCLSIIAFLGG-----  269 (353)
T ss_dssp             EEESSHHHHHHHH-HHTCSEEEETTTS-CHHHHHHHHHSSCEEEEEESCCGGGHHHHHHTEEEEEEEEECCCTTC-----
T ss_pred             EEeCCHHHHHHHH-hcCCCEEEeCCch-HHHHHHHHHhCCCceEEEECCCHHHHHHHHHHhccCCEEEEEEecCC-----
Confidence            9999999999999 9999999999887 89999998884499999999999999999999999999999987432     


Q ss_pred             CCCc-cChHHHhhcceEEEEeecccccc-----hhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceE
Q 026217          161 PEGV-HNLTCLISKRIRMEGFLVPDYFH-----LYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQ  234 (241)
Q Consensus       161 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~  234 (241)
                      .... .+...++.+++++.|+......+     ...+.++.+++++.+|++++.++++||++++++|++.+++++..||+
T Consensus       270 ~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~l~~~~~~gKv  349 (353)
T 4dup_A          270 AVAEKVNLSPIMVKRLTVTGSTMRPRTAEEKRAIRDDLLSEVWPLLEAGTVAPVIHKVFAFEDVADAHRLLEEGSHVGKV  349 (353)
T ss_dssp             SEEEEEECHHHHHTTCEEEECCSTTSCHHHHHHHHHHHHHHTHHHHHHTSSCCCEEEEEEGGGHHHHHHHHHHTCCSSEE
T ss_pred             CcccCCCHHHHHhcCceEEEEeccccchhhhHHHHHHHHHHHHHHHHCCCccCCcceEEeHHHHHHHHHHHHhCCCCceE
Confidence            1122 55677889999999998765421     22334788999999999999999999999999999999999999999


Q ss_pred             EEEe
Q 026217          235 VVEV  238 (241)
Q Consensus       235 vv~~  238 (241)
                      |+++
T Consensus       350 vl~~  353 (353)
T 4dup_A          350 MLTV  353 (353)
T ss_dssp             EEEC
T ss_pred             EEeC
Confidence            9975

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=100.00  E-value=8.3e-39  Score=257.47  Aligned_cols=229  Identities=21%  Similarity=0.291  Sum_probs=200.9

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEE
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVV   80 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~   80 (241)
                      .|+|+||+++|++.++++ |++++.. ++|++++.++|||+++.+.+++++|++|||+||+|++|++++|+++..|++|+
T Consensus        92 ~G~~aey~~v~~~~~~~~-P~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi  169 (325)
T 3jyn_A           92 LGAYSEVHVLPEANLVKL-ADSVSFE-QAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLI  169 (325)
T ss_dssp             SCCSBSEEEEEGGGEEEC-CTTSCHH-HHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEE
T ss_pred             CccccceEEecHHHeEEC-CCCCCHH-HHhhhhhhHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEE
Confidence            489999999999999999 9995554 37889999999999998888999999999999999999999999999999999


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNND  159 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~  159 (241)
                      ++++++++.+.++ ++|+++++|+++. ++.+.+++.+++ ++|++|||+|++.+..++++++++|+++.+|...+    
T Consensus       170 ~~~~~~~~~~~~~-~~Ga~~~~~~~~~-~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~iv~~g~~~~----  243 (325)
T 3jyn_A          170 GTVSSPEKAAHAK-ALGAWETIDYSHE-DVAKRVLELTDGKKCPVVYDGVGQDTWLTSLDSVAPRGLVVSFGNASG----  243 (325)
T ss_dssp             EEESSHHHHHHHH-HHTCSEEEETTTS-CHHHHHHHHTTTCCEEEEEESSCGGGHHHHHTTEEEEEEEEECCCTTC----
T ss_pred             EEeCCHHHHHHHH-HcCCCEEEeCCCc-cHHHHHHHHhCCCCceEEEECCChHHHHHHHHHhcCCCEEEEEecCCC----
Confidence            9999999999999 9999999999887 899999999887 99999999999999999999999999999987432    


Q ss_pred             CCCCccChHHHhhc-ceEEEEeecccc---cchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEE
Q 026217          160 KPEGVHNLTCLISK-RIRMEGFLVPDY---FHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQV  235 (241)
Q Consensus       160 ~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~v  235 (241)
                       +....+...+..+ .+.+.+.....+   ++...+.++++++++.+|++++.++++||++++++||+.+.+++..||+|
T Consensus       244 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~Gkvv  322 (325)
T 3jyn_A          244 -PVSGVNLGILAQKDSVYVTRPTLGSYANNAQNLQTMADELFDMLASGKLKVDGIEQYALKDAAKAQIELSARRTTGSTI  322 (325)
T ss_dssp             -CCCSCCTHHHHHTTSCEEECCCHHHHSCSTTHHHHHHHHHHHHHHTTSSCCCCCEEEEGGGHHHHHHHHHTTCCCSCEE
T ss_pred             -CCCCCCHHHHhhcCcEEEEeeeeeeecCCHHHHHHHHHHHHHHHHCCCeeCccccEEcHHHHHHHHHHHHcCCCCceEE
Confidence             2223555566666 566665544332   45566778899999999999999999999999999999999999999999


Q ss_pred             EEe
Q 026217          236 VEV  238 (241)
Q Consensus       236 v~~  238 (241)
                      +++
T Consensus       323 l~p  325 (325)
T 3jyn_A          323 LIP  325 (325)
T ss_dssp             EEC
T ss_pred             EeC
Confidence            874

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=100.00  E-value=7.5e-38  Score=253.89  Aligned_cols=227  Identities=21%  Similarity=0.262  Sum_probs=195.4

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCC------CCcEEEEEcCCchHHHHHHHHHHH
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPK------QGEYVFVSAASGAVGQLVGQFAKL   74 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~------~~~~vlI~ga~g~~G~~avqla~~   74 (241)
                      .|+|+||+++|++.++++ |++++.. ++|+++++++|||+++.+.++++      +|++|||+||+|++|++++|+|+.
T Consensus        96 ~G~~aey~~v~~~~~~~i-P~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~  173 (346)
T 3fbg_A           96 NGSNAEYQLINERLVAKA-PKNISAE-QAVSLPLTGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKA  173 (346)
T ss_dssp             CCSSBSEEEEEGGGEEEC-CSSSCHH-HHTTSHHHHHHHHHHHHTTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHH
T ss_pred             CcceeEEEEEChHHeEEC-CCCCCHH-HhhhcchhHHHHHHHHHHhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHH
Confidence            489999999999999999 9995555 47888999999999998888898      999999998899999999999999


Q ss_pred             cCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCch-hHHHHHHhhccCCEEEEEeee
Q 026217           75 VGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGK-MLDAVLLNMRIQGRITLCGMI  153 (241)
Q Consensus        75 ~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~  153 (241)
                      .|++|+++++++++.++++ ++|+++++++++  ++.+.+++..++++|++|||+|+. .+..++++++++|+++.++..
T Consensus       174 ~Ga~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~--~~~~~~~~~~~~g~Dvv~d~~g~~~~~~~~~~~l~~~G~iv~~~~~  250 (346)
T 3fbg_A          174 YGLRVITTASRNETIEWTK-KMGADIVLNHKE--SLLNQFKTQGIELVDYVFCTFNTDMYYDDMIQLVKPRGHIATIVAF  250 (346)
T ss_dssp             TTCEEEEECCSHHHHHHHH-HHTCSEEECTTS--CHHHHHHHHTCCCEEEEEESSCHHHHHHHHHHHEEEEEEEEESSCC
T ss_pred             cCCEEEEEeCCHHHHHHHH-hcCCcEEEECCc--cHHHHHHHhCCCCccEEEECCCchHHHHHHHHHhccCCEEEEECCC
Confidence            9999999999999999999 899999999875  688888888444999999999974 578999999999999988642


Q ss_pred             cccCCCCCCCccChHHHhhcceEEEEeecccc-------cchhHHHHHHHHHHHHcCCceeccceee---cCCcHHHHHH
Q 026217          154 SQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY-------FHLYPKFLEMMIPRIKEGKIVYVEDKAE---GLESAPAALV  223 (241)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~g~~~~~~~~~~---~l~~~~~a~~  223 (241)
                      .        ...+...+..+++++.+......       .....+.++.+++++.+|++++.++++|   |++++++|++
T Consensus       251 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~~~~l~~~~~A~~  322 (346)
T 3fbg_A          251 E--------NDQDLNALKPKSLSFSHEFMFARPLNQTDDMIKHHEYLEDITNKVEQNIYQPTTTKVIEGLTTENIYQAHQ  322 (346)
T ss_dssp             S--------SCBCGGGGTTTTCEEEECCTTHHHHTTCTTTHHHHHHHHHHHHHHHTTSSCCCEEEEEESCCHHHHHHHHH
T ss_pred             C--------CCCccccccccceEEEEEEEecccccchhhHHHHHHHHHHHHHHHHCCCEECCccceecCCCHHHHHHHHH
Confidence            1        23445567778999988765432       2233578999999999999999998887   8999999999


Q ss_pred             HhhcCCCcceEEEEecC
Q 026217          224 GLFSGRNVGKQVVEVAT  240 (241)
Q Consensus       224 ~l~~~~~~gk~vv~~~~  240 (241)
                      .+.+++..||+|+++++
T Consensus       323 ~~~~g~~~GKvvl~~~~  339 (346)
T 3fbg_A          323 ILESNTMIGKLVINLNE  339 (346)
T ss_dssp             HHHTTCCCSEEEEEC--
T ss_pred             HHhcCCcceEEEEecCC
Confidence            99999999999999874

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=100.00  E-value=3.1e-38  Score=264.70  Aligned_cols=224  Identities=22%  Similarity=0.245  Sum_probs=196.4

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHh--cCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEV--CSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYV   79 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~--~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v   79 (241)
                      |+||||+++|++.++++ |+++++. ++|+++.+++|||+++...  +++++|++|+|+||+|++|++++|+|+..|++|
T Consensus       179 G~~aey~~v~~~~~~~~-P~~l~~~-~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~v  256 (456)
T 3krt_A          179 GGLAEIALVKSNQLMPK-PDHLSWE-EAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGANP  256 (456)
T ss_dssp             CSSBSEEEEEGGGEEEC-CTTSCHH-HHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEE
T ss_pred             CcccceEEechHHeeEC-CCCCCHH-HHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeE
Confidence            99999999999999999 9995554 3777888999999999754  789999999999999999999999999999999


Q ss_pred             EEEeCCHHHHHHHHHHcCCCeeecCCCchh-----------------HHHHHHHHCCC-CccEEEeCCCchhHHHHHHhh
Q 026217           80 VGSAGSKDKVDLLKNKFGFDEAFNYKEEPD-----------------LDAALKRYFPE-GINIYFENVGGKMLDAVLLNM  141 (241)
Q Consensus        80 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~-----------------~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l  141 (241)
                      +++++++++.++++ ++|++.++++.+. +                 +.+.+++.+++ ++|+||||+|++.+..+++++
T Consensus       257 i~~~~~~~~~~~~~-~lGa~~vi~~~~~-d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~~~~~~~~~~l  334 (456)
T 3krt_A          257 ICVVSSPQKAEICR-AMGAEAIIDRNAE-GYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFGASVFVT  334 (456)
T ss_dssp             EEEESSHHHHHHHH-HHTCCEEEETTTT-TCCSEEETTEECHHHHHHHHHHHHHHHTSCCEEEEEECSCHHHHHHHHHHE
T ss_pred             EEEECCHHHHHHHH-hhCCcEEEecCcC-cccccccccccchHHHHHHHHHHHHHhCCCCCcEEEEcCCchhHHHHHHHh
Confidence            99999999999999 9999999998764 3                 34788888877 999999999999999999999


Q ss_pred             ccCCEEEEEeeecccCCCCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHH
Q 026217          142 RIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAA  221 (241)
Q Consensus       142 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a  221 (241)
                      +++|+++.+|...+     .....+...++.+.+++.|+....     .+.+.++++++.+|.+++.++++|||+++++|
T Consensus       335 ~~~G~iv~~G~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~eA  404 (456)
T 3krt_A          335 RKGGTITTCASTSG-----YMHEYDNRYLWMSLKRIIGSHFAN-----YREAWEANRLIAKGRIHPTLSKVYSLEDTGQA  404 (456)
T ss_dssp             EEEEEEEESCCTTC-----SEEEEEHHHHHHTTCEEEECCSCC-----HHHHHHHHHHHHTTSSCCCEEEEEEGGGHHHH
T ss_pred             hCCcEEEEEecCCC-----cccccCHHHHHhcCeEEEEeccCC-----HHHHHHHHHHHHcCCcccceeEEEcHHHHHHH
Confidence            99999999987432     222355667788889999988766     34556789999999999999999999999999


Q ss_pred             HHHhhcCCCcceEEEEec
Q 026217          222 LVGLFSGRNVGKQVVEVA  239 (241)
Q Consensus       222 ~~~l~~~~~~gk~vv~~~  239 (241)
                      ++.+.+++..||+||.+.
T Consensus       405 ~~~l~~~~~~GKvvv~~~  422 (456)
T 3krt_A          405 AYDVHRNLHQGKVGVLCL  422 (456)
T ss_dssp             HHHHHTTCSSSEEEEESS
T ss_pred             HHHHHhCCCCCcEEEEeC
Confidence            999999999999999874

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=100.00  E-value=7e-38  Score=252.92  Aligned_cols=231  Identities=21%  Similarity=0.293  Sum_probs=200.4

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchh--hhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCE
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYY--TGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY   78 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~--~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~   78 (241)
                      .|+|+||+++|++.++++ |+++++. +  +|+++++++|||+++.+.+++++|++|+|+||+|++|++++|+++..|++
T Consensus        95 ~G~~aey~~v~~~~~~~i-P~~~~~~-~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~  172 (333)
T 1wly_A           95 LGAYSQERLYPAEKLIKV-PKDLDLD-DVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGAT  172 (333)
T ss_dssp             CCCSBSEEEEEGGGCEEC-CTTCCCC-HHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHHHTTCE
T ss_pred             CCcceeEEEecHHHcEeC-CCCCChH-HhCccchhhhHHHHHHHHHHhhCCCCCCEEEEECCccHHHHHHHHHHHHCCCE
Confidence            489999999999999999 9996655 5  68999999999999987789999999999999999999999999999999


Q ss_pred             EEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccC
Q 026217           79 VVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYN  157 (241)
Q Consensus        79 v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~  157 (241)
                      |+++++++++.+.++ ++|++.++|+++. ++.+.+.+.+++ ++|++|||+|+..+..++++++++|+++.+|...+  
T Consensus       173 Vi~~~~~~~~~~~~~-~~g~~~~~d~~~~-~~~~~i~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~iv~~g~~~~--  248 (333)
T 1wly_A          173 VIGTVSTEEKAETAR-KLGCHHTINYSTQ-DFAEVVREITGGKGVDVVYDSIGKDTLQKSLDCLRPRGMCAAYGHASG--  248 (333)
T ss_dssp             EEEEESSHHHHHHHH-HHTCSEEEETTTS-CHHHHHHHHHTTCCEEEEEECSCTTTHHHHHHTEEEEEEEEECCCTTC--
T ss_pred             EEEEeCCHHHHHHHH-HcCCCEEEECCCH-HHHHHHHHHhCCCCCeEEEECCcHHHHHHHHHhhccCCEEEEEecCCC--
Confidence            999999999999998 8999999998887 888888887765 89999999999889999999999999999987432  


Q ss_pred             CCCCCCccChH-HHhhcc--eEEEEeecccc--cchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcc
Q 026217          158 NDKPEGVHNLT-CLISKR--IRMEGFLVPDY--FHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVG  232 (241)
Q Consensus       158 ~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~g  232 (241)
                         .....+.. .++.++  +++.|+....+  +....+.++++++++.+|.+++.++++|||+++++|++.+.+++..|
T Consensus       249 ---~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~g  325 (333)
T 1wly_A          249 ---VADPIRVVEDLGVRGSLFITRPALWHYMSNRSEIDEGSKCLFDAVKAGVLHSSVAKTFPLREAAAAHKYMGGRQTIG  325 (333)
T ss_dssp             ---CCCCCCHHHHTTTTTSCEEECCCGGGGSCSHHHHHHHHHHHHHHHHTTSCCCCEEEEEEGGGHHHHHHHHHHCSCCS
T ss_pred             ---CcCCCChhHhhhhcCCcEEEEEeehhhccCHHHHHHHHHHHHHHHHCCCcCCCcceEEeHHHHHHHHHHHHcCCCce
Confidence               11234455 677788  88888754221  23345689999999999999999999999999999999999988889


Q ss_pred             eEEEEecC
Q 026217          233 KQVVEVAT  240 (241)
Q Consensus       233 k~vv~~~~  240 (241)
                      |+|+++++
T Consensus       326 Kvvi~~~~  333 (333)
T 1wly_A          326 SIVLLPQA  333 (333)
T ss_dssp             EEEEETTC
T ss_pred             EEEEEeCC
Confidence            99998763

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=100.00  E-value=2.7e-37  Score=250.73  Aligned_cols=239  Identities=73%  Similarity=1.225  Sum_probs=202.5

Q ss_pred             CccceEEeecCCc--eeeecCC-CCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCE
Q 026217            2 TGWEEYSLVTAPR--LFKIQHT-DMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY   78 (241)
Q Consensus         2 G~~ae~~~v~~~~--~~~i~P~-~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~   78 (241)
                      |+|+||++++++.  ++++ |+ ++++++++|+++++++|||+++.+.+++++|++|||+||+|++|++++|+++..|++
T Consensus       104 g~~aey~~v~~~~~~~~~i-p~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~  182 (345)
T 2j3h_A          104 VAWEEYSVITPMTHAHFKI-QHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCY  182 (345)
T ss_dssp             EESBSEEEECCCTTTCEEE-CCCSSCTTGGGTTTSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCE
T ss_pred             cCceeEEEecccccceeec-CCCCCCHHHHHHhccccHHHHHHHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCCE
Confidence            6899999999877  9999 74 555776678999999999999988889999999999999999999999999999999


Q ss_pred             EEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCC
Q 026217           79 VVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNN  158 (241)
Q Consensus        79 v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~  158 (241)
                      |+++++++++.+.+++++|++.++|+++..++.+.+++.+++++|++||++|+..+..++++++++|+++.+|.....+.
T Consensus       183 V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~  262 (345)
T 2j3h_A          183 VVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKMLDAVLVNMNMHGRIAVCGMISQYNL  262 (345)
T ss_dssp             EEEEESSHHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCTTCEEEEEESSCHHHHHHHHTTEEEEEEEEECCCGGGTTC
T ss_pred             EEEEeCCHHHHHHHHHHcCCceEEecCCHHHHHHHHHHHhCCCCcEEEECCCHHHHHHHHHHHhcCCEEEEEcccccccc
Confidence            99999999999999756999988888752267777887775689999999999889999999999999999987553211


Q ss_pred             CCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEEEe
Q 026217          159 DKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  238 (241)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv~~  238 (241)
                      .......+...++.+++++.++....+.+...+.+.++++++.+|.+++.+..+|||+++++||+.+.+++..||+|+++
T Consensus       263 ~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  342 (345)
T 2j3h_A          263 ENQEGVHNLSNIIYKRNRIQGFVVSDFYDKYSKFLEFVLPHIREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVV  342 (345)
T ss_dssp             SSCCCBSCTTHHHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSCCCEEEEESGGGSHHHHHHHHTTCCSSEEEEES
T ss_pred             CCccccccHHHHhhhceeeceeeehhhhhhHHHHHHHHHHHHHCCCCcCcccccCCHHHHHHHHHHHHcCCCceEEEEEe
Confidence            11122344567788999999987655444557789999999999999988888899999999999999998899999998


Q ss_pred             cCC
Q 026217          239 ATE  241 (241)
Q Consensus       239 ~~~  241 (241)
                      +++
T Consensus       343 ~~~  345 (345)
T 2j3h_A          343 ARE  345 (345)
T ss_dssp             SCC
T ss_pred             CCC
Confidence            764

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=9.6e-38  Score=253.04  Aligned_cols=224  Identities=25%  Similarity=0.344  Sum_probs=197.4

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEE
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVV   80 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~   80 (241)
                      .|+|+||+++|++.++++ |+++++. ++|+++.+++|||+++.+.+++++|++|||+||+|++|++++|+++..|++|+
T Consensus       118 ~G~~aey~~v~~~~~~~~-P~~~~~~-~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi  195 (343)
T 2eih_A          118 HGTYAEYVVLPEANLAPK-PKNLSFE-EAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVI  195 (343)
T ss_dssp             CCSSBSEEEEEGGGEEEC-CTTSCHH-HHHHSHHHHHHHHHHHTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEE
T ss_pred             CccceeEEEeChHHeEEC-CCCCCHH-HHhhchhhHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEE
Confidence            389999999999999999 9995444 36779999999999997767999999999999999999999999999999999


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNND  159 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~  159 (241)
                      ++++++++.+.++ ++|++.++|+++. ++.+.+++.+++ ++|++||++|.+.+..++++++++|+++.+|.....   
T Consensus       196 ~~~~~~~~~~~~~-~~ga~~~~d~~~~-~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~---  270 (343)
T 2eih_A          196 ATAGSEDKLRRAK-ALGADETVNYTHP-DWPKEVRRLTGGKGADKVVDHTGALYFEGVIKATANGGRIAIAGASSGY---  270 (343)
T ss_dssp             EEESSHHHHHHHH-HHTCSEEEETTST-THHHHHHHHTTTTCEEEEEESSCSSSHHHHHHHEEEEEEEEESSCCCSC---
T ss_pred             EEeCCHHHHHHHH-hcCCCEEEcCCcc-cHHHHHHHHhCCCCceEEEECCCHHHHHHHHHhhccCCEEEEEecCCCC---
Confidence            9999999999998 8999999998887 888889888876 899999999988899999999999999999874421   


Q ss_pred             CCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEEEe
Q 026217          160 KPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  238 (241)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv~~  238 (241)
                        ....+...++.+++++.|+....     .+.++++++++.+|.+++.++++|||+++++||+.+.+++..||+|+++
T Consensus       271 --~~~~~~~~~~~~~~~~~g~~~~~-----~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  342 (343)
T 2eih_A          271 --EGTLPFAHVFYRQLSILGSTMAS-----KSRLFPILRFVEEGKLKPVVGQVLPLEAAAEGHRLLEERRVFGKVVLQV  342 (343)
T ss_dssp             --CCCCCTTHHHHTTCEEEECCSCC-----GGGHHHHHHHHHHTSSCCCEEEEEEGGGHHHHHHHHHTTCSSSEEEEEC
T ss_pred             --cCccCHHHHHhCCcEEEEecCcc-----HHHHHHHHHHHHcCCCCCceeEEeeHHHHHHHHHHHHcCCCceEEEEec
Confidence              12244567788999999976433     5668899999999999999999999999999999999988889999975

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.8e-37  Score=250.79  Aligned_cols=227  Identities=23%  Similarity=0.345  Sum_probs=197.2

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEE
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVV   80 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~   80 (241)
                      .|+|+||+++|++.++++ |+++++. ++|+++++++|||+++.+.+++++|++|+|+||+|++|++++|+++..|++|+
T Consensus       122 ~G~~aey~~v~~~~~~~~-P~~l~~~-~aA~l~~~~~ta~~al~~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi  199 (351)
T 1yb5_A          122 SGGYAEYALAADHTVYKL-PEKLDFK-QGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKIL  199 (351)
T ss_dssp             SCSSBSEEEEEGGGEEEC-CTTSCHH-HHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEE
T ss_pred             CCcceeEEEECHHHeEEC-CCCCCHH-HHHhhhhHHHHHHHHHHHhhCCCCcCEEEEECCCChHHHHHHHHHHHCCCEEE
Confidence            389999999999999999 9995544 37889999999999998778999999999999999999999999999999999


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNND  159 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~  159 (241)
                      ++++++++.+.++ ++|++.++|+++. ++.+.+.+.+++ ++|++|||+|+..+..++++++++|+++.+|...     
T Consensus       200 ~~~~~~~~~~~~~-~~ga~~~~d~~~~-~~~~~~~~~~~~~~~D~vi~~~G~~~~~~~~~~l~~~G~iv~~g~~~-----  272 (351)
T 1yb5_A          200 GTAGTEEGQKIVL-QNGAHEVFNHREV-NYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVGSRG-----  272 (351)
T ss_dssp             EEESSHHHHHHHH-HTTCSEEEETTST-THHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHEEEEEEEEECCCCS-----
T ss_pred             EEeCChhHHHHHH-HcCCCEEEeCCCc-hHHHHHHHHcCCCCcEEEEECCChHHHHHHHHhccCCCEEEEEecCC-----
Confidence            9999999999998 9999999999887 888888887766 8999999999888899999999999999998531     


Q ss_pred             CCCCccChHHHhhcceEEEEeecccc-cchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHH-hhcCCCcceEEEE
Q 026217          160 KPEGVHNLTCLISKRIRMEGFLVPDY-FHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVG-LFSGRNVGKQVVE  237 (241)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~-l~~~~~~gk~vv~  237 (241)
                        ....+...++.+++++.++..... ++.+.+.++.+.+++.+|.+++.++++|||+++++|++. +++++..||+|++
T Consensus       273 --~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~~gKvvi~  350 (351)
T 1yb5_A          273 --TIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEIGWLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILL  350 (351)
T ss_dssp             --CEEECTHHHHTTTCEEEECCGGGCCHHHHHHHHHHHHHHHHHTCCCCCEEEEEEGGGHHHHHHHHHHSSCCSSEEEEE
T ss_pred             --CCccCHHHHHhCCcEEEEEEeecCCHHHHHHHHHHHHHHHHCCCccCccceEEcHHHHHHHHHHHHHhCCCCeEEEEe
Confidence              123455677889999999865432 344566777888899999999999999999999999998 6666778999987


Q ss_pred             e
Q 026217          238 V  238 (241)
Q Consensus       238 ~  238 (241)
                      +
T Consensus       351 ~  351 (351)
T 1yb5_A          351 L  351 (351)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=100.00  E-value=3.4e-37  Score=249.54  Aligned_cols=221  Identities=19%  Similarity=0.282  Sum_probs=196.0

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEE
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVV   80 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~   80 (241)
                      .|+|+||+++|++.++++ |+++++. ++|++++++.|||+++ +..++++|++|||+|+ |++|++++|+|+.+|++|+
T Consensus       119 ~G~~aey~~v~~~~~~~i-P~~~~~~-~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi  194 (340)
T 3s2e_A          119 NGGYGEYVVADPNYVGLL-PDKVGFV-EIAPILCAGVTVYKGL-KVTDTRPGQWVVISGI-GGLGHVAVQYARAMGLRVA  194 (340)
T ss_dssp             CCSSBSEEEECTTTSEEC-CTTSCHH-HHGGGGTHHHHHHHHH-HTTTCCTTSEEEEECC-STTHHHHHHHHHHTTCEEE
T ss_pred             CCcceeEEEechHHEEEC-CCCCCHH-HhhcccchhHHHHHHH-HHcCCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEE
Confidence            389999999999999999 9995555 4888999999999999 5679999999999996 9999999999999999999


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeecccCCC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNND  159 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~  159 (241)
                      ++++++++.++++ ++|+++++|+++. ++.+.+++. .+++|++||++|+ +.+..++++++++|+++.+|...     
T Consensus       195 ~~~~~~~~~~~~~-~lGa~~~i~~~~~-~~~~~~~~~-~g~~d~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~-----  266 (340)
T 3s2e_A          195 AVDIDDAKLNLAR-RLGAEVAVNARDT-DPAAWLQKE-IGGAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPP-----  266 (340)
T ss_dssp             EEESCHHHHHHHH-HTTCSEEEETTTS-CHHHHHHHH-HSSEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCS-----
T ss_pred             EEeCCHHHHHHHH-HcCCCEEEeCCCc-CHHHHHHHh-CCCCCEEEEeCCCHHHHHHHHHHhccCCEEEEeCCCC-----
Confidence            9999999999999 9999999999987 888888884 3489999999985 78899999999999999998743     


Q ss_pred             CCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEEEec
Q 026217          160 KPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVA  239 (241)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv~~~  239 (241)
                       .....+...++.+++++.++....     .+.++++++++.+|++++.+ +.+||+++++||+.+++++..||+|++++
T Consensus       267 -~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~Gkvvv~~~  339 (340)
T 3s2e_A          267 -GDFGTPIFDVVLKGITIRGSIVGT-----RSDLQESLDFAAHGDVKATV-STAKLDDVNDVFGRLREGKVEGRVVLDFS  339 (340)
T ss_dssp             -SEEEEEHHHHHHTTCEEEECCSCC-----HHHHHHHHHHHHTTSCCCCE-EEECGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred             -CCCCCCHHHHHhCCeEEEEEecCC-----HHHHHHHHHHHHhCCCCceE-EEEeHHHHHHHHHHHHcCCCceEEEEecC
Confidence             123455677888999999988765     77899999999999999865 56799999999999999999999999986


Q ss_pred             C
Q 026217          240 T  240 (241)
Q Consensus       240 ~  240 (241)
                      +
T Consensus       340 ~  340 (340)
T 3s2e_A          340 R  340 (340)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=100.00  E-value=2.1e-37  Score=251.87  Aligned_cols=229  Identities=24%  Similarity=0.371  Sum_probs=197.2

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVG   81 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~   81 (241)
                      |+|+||+++|++.++++ |+++++. ++|+++++++|||+++.+.+++++|++|+|+||+|++|++++|+++..|++|++
T Consensus       115 G~~aey~~v~~~~~~~i-P~~ls~~-~aa~l~~~~~tA~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~  192 (354)
T 2j8z_A          115 GGQAQYVTVPEGLLMPI-PEGLTLT-QAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLV  192 (354)
T ss_dssp             CCSBSEEEEEGGGEEEC-CTTCCHH-HHTTSHHHHHHHHHHHTTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEE
T ss_pred             CcceeEEEeCHHHcEEC-CCCCCHH-HHHhccchHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEE
Confidence            89999999999999999 9995544 377899999999999988889999999999999999999999999999999999


Q ss_pred             EeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCCC
Q 026217           82 SAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDK  160 (241)
Q Consensus        82 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~  160 (241)
                      +++++++.+.++ ++|++.++|+++. ++.+.+.+.+++ ++|++|||+|+..+..++++++++|+++.+|...+     
T Consensus       193 ~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~G~~~~~~~~~~l~~~G~iv~~G~~~~-----  265 (354)
T 2j8z_A          193 TAGSQKKLQMAE-KLGAAAGFNYKKE-DFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMGG-----  265 (354)
T ss_dssp             EESCHHHHHHHH-HHTCSEEEETTTS-CHHHHHHHHTTTSCEEEEEESSCGGGHHHHHHHEEEEEEEEECCCTTC-----
T ss_pred             EeCCHHHHHHHH-HcCCcEEEecCCh-HHHHHHHHHhcCCCceEEEECCCchHHHHHHHhccCCCEEEEEeccCC-----
Confidence            999999999998 9999999999887 888899888876 89999999999889999999999999999987432     


Q ss_pred             CCCccCh-HHHhhcceEEEEeecccccch-----hHHHHHHHHHHHHcC---CceeccceeecCCcHHHHHHHhhcCCCc
Q 026217          161 PEGVHNL-TCLISKRIRMEGFLVPDYFHL-----YPKFLEMMIPRIKEG---KIVYVEDKAEGLESAPAALVGLFSGRNV  231 (241)
Q Consensus       161 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g---~~~~~~~~~~~l~~~~~a~~~l~~~~~~  231 (241)
                      .....+. ..++.+++++.++........     ..+.++++++++.+|   .+++.++++|||+++++|++.+.+++..
T Consensus       266 ~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l~~~i~~~~~l~~~~~A~~~~~~~~~~  345 (354)
T 2j8z_A          266 GDINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQRLLPVLDRIYPVTEIQEAHKYMEANKNI  345 (354)
T ss_dssp             SCCCSCHHHHHHHTTCEEEECCSTTCCHHHHHHHHHHHHHHTGGGGTC---CCCCCCEEEEEEGGGHHHHHHHHHTTCCS
T ss_pred             CccCCChhHHHHhCCCEEEEEEcccccccccHHHHHHHHHHHHHHHHcCCCccccCccceEEcHHHHHHHHHHHHhCCCC
Confidence            1123455 677889999999876543211     122345688899999   9999999999999999999999998888


Q ss_pred             ceEEEEec
Q 026217          232 GKQVVEVA  239 (241)
Q Consensus       232 gk~vv~~~  239 (241)
                      ||+|++++
T Consensus       346 gKvvv~~~  353 (354)
T 2j8z_A          346 GKIVLELP  353 (354)
T ss_dssp             SEEEEECC
T ss_pred             ceEEEecC
Confidence            99999875

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=100.00  E-value=1.9e-37  Score=251.13  Aligned_cols=224  Identities=17%  Similarity=0.292  Sum_probs=195.5

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEE
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVV   80 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~   80 (241)
                      .|+|+||+++|++.++++ |++++.. ++|+++++++|||+++.+.+++++|++|||+||+|++|++++|+|+..|++|+
T Consensus       102 ~G~~aey~~v~~~~~~~~-P~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi  179 (343)
T 3gaz_A          102 QGTHAQFAAVDARLLASK-PAALTMR-QASVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVF  179 (343)
T ss_dssp             CCSSBSEEEEEGGGEEEC-CTTSCHH-HHHTSHHHHHHHHHHHTTTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEE
T ss_pred             CcceeeEEEecHHHeeeC-CCCCCHH-HHHHhhhhHHHHHHHHHHhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEE
Confidence            489999999999999999 9995555 47888999999999998889999999999999999999999999999999999


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNND  159 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~  159 (241)
                      ++ .+++++++++ ++|++. ++ ++. ++.+.+++.+++ ++|++|||+|++.+..++++++++|+++.+|...     
T Consensus       180 ~~-~~~~~~~~~~-~lGa~~-i~-~~~-~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~g~~~-----  249 (343)
T 3gaz_A          180 AT-ARGSDLEYVR-DLGATP-ID-ASR-EPEDYAAEHTAGQGFDLVYDTLGGPVLDASFSAVKRFGHVVSCLGWG-----  249 (343)
T ss_dssp             EE-ECHHHHHHHH-HHTSEE-EE-TTS-CHHHHHHHHHTTSCEEEEEESSCTHHHHHHHHHEEEEEEEEESCCCS-----
T ss_pred             EE-eCHHHHHHHH-HcCCCE-ec-cCC-CHHHHHHHHhcCCCceEEEECCCcHHHHHHHHHHhcCCeEEEEcccC-----
Confidence            99 7899999999 999988 77 555 888889888877 9999999999999999999999999999988632     


Q ss_pred             CCCCccChHHHhhcceEEEEeecccc------cchhHHHHHHHHHHHHcCCceeccc-eeecCCcHHHHHHHhhcCCC--
Q 026217          160 KPEGVHNLTCLISKRIRMEGFLVPDY------FHLYPKFLEMMIPRIKEGKIVYVED-KAEGLESAPAALVGLFSGRN--  230 (241)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~l~~~~~a~~~l~~~~~--  230 (241)
                          ..+...++.+++++.++.....      ++...+.++++++++.+|++++.++ ++|||+++++|++.+.+++.  
T Consensus       250 ----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~~l~~~~~A~~~~~~~~~~G  325 (343)
T 3gaz_A          250 ----THKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEMLREADALVQTGKLAPRLDPRTFSIAEIGSAYDAVLGRNDVP  325 (343)
T ss_dssp             ----CCCCHHHHHTTCEEEECCTTHHHHHTCSHHHHHHHHHHHHHHHHTTCCCCCBCSCCEETTCHHHHHHHHHTCTTCC
T ss_pred             ----ccccchhhhcCcEEEEEEeccchhcccchHHHHHHHHHHHHHHHCCCcccCccCcEecHHHHHHHHHHHHcCCCcc
Confidence                2345677889999999765321      2334578999999999999999999 79999999999999998754  


Q ss_pred             --cceEEEEecC
Q 026217          231 --VGKQVVEVAT  240 (241)
Q Consensus       231 --~gk~vv~~~~  240 (241)
                        .||+|++++.
T Consensus       326 r~~GK~v~~~~~  337 (343)
T 3gaz_A          326 RQRGKIAITVEG  337 (343)
T ss_dssp             CCSSBCEEECC-
T ss_pred             cccceEEEEecc
Confidence              6899999864

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=4.3e-37  Score=250.52  Aligned_cols=217  Identities=21%  Similarity=0.295  Sum_probs=190.7

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhh---hcCchhHHHHHHHHHh-cCCCCCcEEEEEcCCchHHHHHHHHHHHc-
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTG---ILGMPGMTAYAGFFEV-CSPKQGEYVFVSAASGAVGQLVGQFAKLV-   75 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a---~l~~~~~ta~~~l~~~-~~~~~~~~vlI~ga~g~~G~~avqla~~~-   75 (241)
                      .|+|+||+++|++.++++ |+++++. ++|   +++++++|||+++.+. +++++|++|||+|| |++|++++|+|+.+ 
T Consensus       134 ~G~~aey~~v~~~~~~~i-P~~~~~~-~aa~~~~l~~~~~ta~~al~~~~~~~~~g~~VlV~Ga-G~vG~~avqlak~~~  210 (359)
T 1h2b_A          134 DGGFAEFMRTSHRSVIKL-PKDISRE-KLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGV-GGLGHIAVQLLKVMT  210 (359)
T ss_dssp             CCSSBSEEEECGGGEEEC-CTTCCHH-HHHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECC-SHHHHHHHHHHHHHC
T ss_pred             CCcccceEEechHhEEEC-CCCCCHH-HHhhccchhhhHHHHHHHHHhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcC
Confidence            389999999999999999 9995544 355   7889999999999765 89999999999998 99999999999999 


Q ss_pred             CCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCch---hHHHHHHhhccCCEEEEEe
Q 026217           76 GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGGK---MLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus        76 g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~---~~~~~~~~l~~~G~~v~~g  151 (241)
                      |++|++++++++++++++ ++|+++++|+++.  +.+.+++.+++ ++|+|||++|+.   .+..++++  ++|+++.+|
T Consensus       211 Ga~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~~--~~~~v~~~~~g~g~Dvvid~~G~~~~~~~~~~~~~--~~G~~v~~g  285 (359)
T 1h2b_A          211 PATVIALDVKEEKLKLAE-RLGADHVVDARRD--PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLG--RMGRLIIVG  285 (359)
T ss_dssp             CCEEEEEESSHHHHHHHH-HTTCSEEEETTSC--HHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEE--EEEEEEECC
T ss_pred             CCeEEEEeCCHHHHHHHH-HhCCCEEEeccch--HHHHHHHHhCCCCCcEEEECCCCchHHHHHHHhhc--CCCEEEEEe
Confidence            999999999999999999 9999999998863  77788888877 899999999986   77788877  999999998


Q ss_pred             eecccCCCCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCc
Q 026217          152 MISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNV  231 (241)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~  231 (241)
                      ....     +  ..+...++.+++++.++....     .+.++++++++.+|.+++.+ ++|||+++++|++.+.+++..
T Consensus       286 ~~~~-----~--~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~i-~~~~l~~~~~A~~~~~~~~~~  352 (359)
T 1h2b_A          286 YGGE-----L--RFPTIRVISSEVSFEGSLVGN-----YVELHELVTLALQGKVRVEV-DIHKLDEINDVLERLEKGEVL  352 (359)
T ss_dssp             CSSC-----C--CCCHHHHHHTTCEEEECCSCC-----HHHHHHHHHHHHTTSCCCCE-EEEEGGGHHHHHHHHHTTCCS
T ss_pred             CCCC-----C--CCCHHHHHhCCcEEEEecCCC-----HHHHHHHHHHHHcCCCcceE-EEEeHHHHHHHHHHHHcCCCc
Confidence            7431     1  355667888999999987654     67889999999999999988 999999999999999998888


Q ss_pred             ceEEEEe
Q 026217          232 GKQVVEV  238 (241)
Q Consensus       232 gk~vv~~  238 (241)
                      ||+|+++
T Consensus       353 gKvvv~~  359 (359)
T 1h2b_A          353 GRAVLIP  359 (359)
T ss_dssp             SEEEEEC
T ss_pred             eEEEeeC
Confidence            9999874

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=100.00  E-value=1.3e-36  Score=247.72  Aligned_cols=238  Identities=36%  Similarity=0.624  Sum_probs=203.1

Q ss_pred             CccceEEeecCCceeeecCCCC---CcchhhhhcCchhHHHHHHHHHhcCCCCC--cEEEEEcCCchHHHHHHHHHHHcC
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDM---PLSYYTGILGMPGMTAYAGFFEVCSPKQG--EYVFVSAASGAVGQLVGQFAKLVG   76 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~---~~~~~~a~l~~~~~ta~~~l~~~~~~~~~--~~vlI~ga~g~~G~~avqla~~~g   76 (241)
                      |+|+||+++|++.++++ |+++   +.++++|+++++++|||+++.+.+++++|  ++|+|+||+|++|++++|+++..|
T Consensus       107 G~~aey~~v~~~~~~~i-P~~~~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~G  185 (357)
T 2zb4_A          107 WPWQTKVILDGNSLEKV-DPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLG  185 (357)
T ss_dssp             EESBSEEEEEGGGCEEC-CGGGGTTCGGGGGTTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTT
T ss_pred             CCcEEEEEEchHHceec-CcccccCchhHHHHhcccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCC
Confidence            78999999999999999 9985   22555789999999999999888899999  999999999999999999999999


Q ss_pred             C-EEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeeecc
Q 026217           77 C-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQ  155 (241)
Q Consensus        77 ~-~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~  155 (241)
                      + +|+++++++++.+.+++++|++.++|+++. ++.+.+.+.+++++|++|||+|+..+..++++++++|+++.+|....
T Consensus       186 a~~Vi~~~~~~~~~~~~~~~~g~~~~~d~~~~-~~~~~~~~~~~~~~d~vi~~~G~~~~~~~~~~l~~~G~iv~~G~~~~  264 (357)
T 2zb4_A          186 CSRVVGICGTHEKCILLTSELGFDAAINYKKD-NVAEQLRESCPAGVDVYFDNVGGNISDTVISQMNENSHIILCGQISQ  264 (357)
T ss_dssp             CSEEEEEESCHHHHHHHHHTSCCSEEEETTTS-CHHHHHHHHCTTCEEEEEESCCHHHHHHHHHTEEEEEEEEECCCGGG
T ss_pred             CCeEEEEeCCHHHHHHHHHHcCCceEEecCch-HHHHHHHHhcCCCCCEEEECCCHHHHHHHHHHhccCcEEEEECCccc
Confidence            9 999999999999999834999999999887 88888988876689999999999889999999999999999987543


Q ss_pred             cCCCCCCCccC----hHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCc
Q 026217          156 YNNDKPEGVHN----LTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNV  231 (241)
Q Consensus       156 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~  231 (241)
                      .+...+.....    ...++.+++++.++....+.+...+.+.++++++.+|.+++.+..+|||+++++||+.+.+++..
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~  344 (357)
T 2zb4_A          265 YNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGILQLSQWFKEGKLKIKETVINGLENMGAAFQSMMTGGNI  344 (357)
T ss_dssp             TTSCCCSSCCCCHHHHHHHHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTCCCCCEEEEECGGGHHHHHHHHHTTCCS
T ss_pred             cccCccccccchhhhhhhhhcceeEEEEeehhhhhHHHHHHHHHHHHHHHcCCCcCccceecCHHHHHHHHHHHHcCCCC
Confidence            21111100000    14677899999998765555555788999999999999999888889999999999999998888


Q ss_pred             ceEEEEecCC
Q 026217          232 GKQVVEVATE  241 (241)
Q Consensus       232 gk~vv~~~~~  241 (241)
                      ||+|++++++
T Consensus       345 gKvvi~~~~~  354 (357)
T 2zb4_A          345 GKQIVCISEE  354 (357)
T ss_dssp             BEEEEECCCC
T ss_pred             ceEEEEEecc
Confidence            9999998753

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=100.00  E-value=5.4e-37  Score=249.23  Aligned_cols=221  Identities=20%  Similarity=0.277  Sum_probs=196.8

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHc-CCEE
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYV   79 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~-g~~v   79 (241)
                      .|+|+||++++++.++++ |++++.. ++|+++++++|||+++ +.+++++|++|+|+|| |++|.+++|+++++ |++|
T Consensus       116 ~G~~ae~~~~~~~~~~~i-P~~~~~~-~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~V  191 (348)
T 4eez_A          116 DGGMAEEAIVVADYAVKV-PDGLDPI-EASSITCAGVTTYKAI-KVSGVKPGDWQVIFGA-GGLGNLAIQYAKNVFGAKV  191 (348)
T ss_dssp             CCSSBSEEEEEGGGSCBC-CTTSCHH-HHHHHHHHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTSCCEE
T ss_pred             CCcceeeccccccceeec-CCCCCHH-HHhhcccceeeEEeee-cccCCCCCCEEEEEcC-CCccHHHHHHHHHhCCCEE
Confidence            389999999999999999 9995544 4889999999999999 5679999999999996 99999999999877 6799


Q ss_pred             EEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeecccC
Q 026217           80 VGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYN  157 (241)
Q Consensus        80 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~  157 (241)
                      +++++++++.++++ ++|+++++|+++. ++.+++++.+++ ++|.+++++++ ..+..++++++++|+++.+|...   
T Consensus       192 i~~~~~~~r~~~~~-~~Ga~~~i~~~~~-~~~~~v~~~t~g~g~d~~~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~---  266 (348)
T 4eez_A          192 IAVDINQDKLNLAK-KIGADVTINSGDV-NPVDEIKKITGGLGVQSAIVCAVARIAFEQAVASLKPMGKMVAVAVPN---  266 (348)
T ss_dssp             EEEESCHHHHHHHH-HTTCSEEEEC-CC-CHHHHHHHHTTSSCEEEEEECCSCHHHHHHHHHTEEEEEEEEECCCCS---
T ss_pred             EEEECcHHHhhhhh-hcCCeEEEeCCCC-CHHHHhhhhcCCCCceEEEEeccCcchhheeheeecCCceEEEEeccC---
Confidence            99999999999999 9999999999998 999999999988 99999999986 67899999999999999998633   


Q ss_pred             CCCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEEE
Q 026217          158 NDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVE  237 (241)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv~  237 (241)
                         .....+...++.+++++.|+....     ++.+.++++++.+|++++.+ ++|||+++++||+.+++++..||+||+
T Consensus       267 ---~~~~~~~~~~~~~~~~i~gs~~~~-----~~~~~~~~~l~~~g~i~p~~-~~~~l~~~~~A~~~l~~g~~~GKvVl~  337 (348)
T 4eez_A          267 ---TEMTLSVPTVVFDGVEVAGSLVGT-----RLDLAEAFQFGAEGKVKPIV-ATRKLEEINDIIDEMKAGKIEGRMVID  337 (348)
T ss_dssp             ---CEEEECHHHHHHSCCEEEECCSCC-----HHHHHHHHHHHHTTSCCCCE-EEECGGGHHHHHHHHHTTCCSSEEEEE
T ss_pred             ---CCCccCHHHHHhCCeEEEEEecCC-----HHHHHHHHHHHHcCCCEEEE-EEEeHHHHHHHHHHHHCCCCccEEEEE
Confidence               223466778899999999988766     67789999999999999865 789999999999999999999999999


Q ss_pred             ec
Q 026217          238 VA  239 (241)
Q Consensus       238 ~~  239 (241)
                      ++
T Consensus       338 ~s  339 (348)
T 4eez_A          338 FT  339 (348)
T ss_dssp             CC
T ss_pred             cc
Confidence            86

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=100.00  E-value=3.5e-37  Score=249.45  Aligned_cols=229  Identities=14%  Similarity=0.238  Sum_probs=194.0

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEE
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVV   80 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~   80 (241)
                      .|+|+||+++|++.++++ |++++.. ++|++++.++|||+++.+.+++++|++|||+||+|++|++++|+|+..|++|+
T Consensus        96 ~G~~aey~~v~~~~~~~v-P~~l~~~-~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi  173 (340)
T 3gms_A           96 EGTWQEYVKTSADFVVPI-PDSIDDF-TAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLI  173 (340)
T ss_dssp             SCSSBSEEEEEGGGEEEC-CTTSCHH-HHTTSSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEE
T ss_pred             CccceeEEEcCHHHeEEC-CCCCCHH-HHhhhcchHHHHHHHHHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCCEEE
Confidence            489999999999999999 9995544 37888999999999998889999999999999988999999999999999999


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNND  159 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~  159 (241)
                      ++++++++.+.++ ++|+++++|+++. ++.+.+++.+++ ++|++|||+|+......+++++++|+++.+|...+.   
T Consensus       174 ~~~~~~~~~~~~~-~lga~~~~~~~~~-~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~---  248 (340)
T 3gms_A          174 AVTRNNKHTEELL-RLGAAYVIDTSTA-PLYETVMELTNGIGADAAIDSIGGPDGNELAFSLRPNGHFLTIGLLSGI---  248 (340)
T ss_dssp             EEESSSTTHHHHH-HHTCSEEEETTTS-CHHHHHHHHTTTSCEEEEEESSCHHHHHHHHHTEEEEEEEEECCCTTSC---
T ss_pred             EEeCCHHHHHHHH-hCCCcEEEeCCcc-cHHHHHHHHhCCCCCcEEEECCCChhHHHHHHHhcCCCEEEEEeecCCC---
Confidence            9999999999999 9999999999887 899999999887 999999999988777888999999999999874321   


Q ss_pred             CCCCccChHHHh-hcceEEEEeecccc-----cchhHHHHHHHHHHHHcCCcee-ccceeecCCcHHHHHHHhhcCCC-c
Q 026217          160 KPEGVHNLTCLI-SKRIRMEGFLVPDY-----FHLYPKFLEMMIPRIKEGKIVY-VEDKAEGLESAPAALVGLFSGRN-V  231 (241)
Q Consensus       160 ~~~~~~~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~l~~~~~a~~~l~~~~~-~  231 (241)
                          ..+...+. ..++.+..+....+     .....+.++++++++.+|++++ .++++||++++++||+.+.+++. .
T Consensus       249 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~i~~~~~l~~~~~A~~~~~~~~~~~  324 (340)
T 3gms_A          249 ----QVNWAEIVTKAKVHANIFHLRHWNDEVSPYKWQETFRHLIRLVENEQLRFMKVHSTYELADVKAAVDVVQSAEKTK  324 (340)
T ss_dssp             ----CCCHHHHHHTSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCCCEEEEEEGGGHHHHHHHHHCTTCCS
T ss_pred             ----CCCHHHhhhcccceEEEEEehhhhhhcCHHHHHHHHHHHHHHHHcCCCccccccEEEeHHHHHHHHHHHHhcCCCC
Confidence                12222222 24555555544322     2334678999999999999997 57899999999999999999874 5


Q ss_pred             ceEEEEecC
Q 026217          232 GKQVVEVAT  240 (241)
Q Consensus       232 gk~vv~~~~  240 (241)
                      ||+++++.+
T Consensus       325 GKvvl~~~~  333 (340)
T 3gms_A          325 GKVFLTSYE  333 (340)
T ss_dssp             SEEEEECC-
T ss_pred             CeEEEEEec
Confidence            999999864

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=4.3e-37  Score=247.78  Aligned_cols=229  Identities=21%  Similarity=0.225  Sum_probs=197.1

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEE
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVV   80 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~   80 (241)
                      .|+|+||+++|++.++++ |+++++. ++|+++++++|||+++.+.+++++|++|+|+||+|++|++++|+++..|++|+
T Consensus        92 ~G~~aey~~v~~~~~~~i-P~~l~~~-~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~  169 (327)
T 1qor_A           92 LGAYSSVHNIIADKAAIL-PAAISFE-QAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLI  169 (327)
T ss_dssp             SCCSBSEEEEEGGGEEEC-CTTSCHH-HHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEE
T ss_pred             CceeeeEEEecHHHcEEC-CCCCCHH-HHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEE
Confidence            389999999999999999 9995544 37799999999999998778999999999999999999999999999999999


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNND  159 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~  159 (241)
                      ++++++++.+.++ ++|++.++|+++. ++.+.+.+.+++ ++|++|||+|...+..++++++++|+++.+|...+    
T Consensus       170 ~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~l~~~G~iv~~g~~~~----  243 (327)
T 1qor_A          170 GTVGTAQKAQSAL-KAGAWQVINYREE-DLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGNSSG----  243 (327)
T ss_dssp             EEESSHHHHHHHH-HHTCSEEEETTTS-CHHHHHHHHTTTCCEEEEEECSCGGGHHHHHHTEEEEEEEEECCCTTC----
T ss_pred             EEeCCHHHHHHHH-HcCCCEEEECCCc-cHHHHHHHHhCCCCceEEEECCchHHHHHHHHHhcCCCEEEEEecCCC----
Confidence            9999999999999 8999999998887 888888888766 89999999998899999999999999999987432    


Q ss_pred             CCCCccChHHHhhc-ceEEEEeecccc---cchhHHHHHHHHHHHHcCCceeccc--eeecCCcHHHHHHHhhcCCCcce
Q 026217          160 KPEGVHNLTCLISK-RIRMEGFLVPDY---FHLYPKFLEMMIPRIKEGKIVYVED--KAEGLESAPAALVGLFSGRNVGK  233 (241)
Q Consensus       160 ~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~l~~~~~a~~~l~~~~~~gk  233 (241)
                       .....+...++.+ .+.+.+.....+   .+...+.++++++++.+|.+++.++  ++|||+++++|++.+.+++..||
T Consensus       244 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~~~l~~~~~A~~~~~~~~~~gK  322 (327)
T 1qor_A          244 -AVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDVAEQQKYPLKDAQRAHEILESRATQGS  322 (327)
T ss_dssp             -CCCCBCTHHHHHTTSCEEECCCHHHHCCSHHHHHHHHHHHHHHHHTTSSCCCCCGGGEEEGGGHHHHHHHHHTTCCCBC
T ss_pred             -CCCccCHHHHhhccceEEEccchhhhcCCHHHHHHHHHHHHHHHHCCCcccccccCcEEcHHHHHHHHHHHHhCCCCce
Confidence             1123455566677 777776543222   2234677899999999999999998  89999999999999999888899


Q ss_pred             EEEEe
Q 026217          234 QVVEV  238 (241)
Q Consensus       234 ~vv~~  238 (241)
                      +|+++
T Consensus       323 vvl~~  327 (327)
T 1qor_A          323 SLLIP  327 (327)
T ss_dssp             CEEEC
T ss_pred             EEEeC
Confidence            99864

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=100.00  E-value=1.8e-37  Score=259.73  Aligned_cols=224  Identities=23%  Similarity=0.229  Sum_probs=194.7

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHh--cCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEV--CSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYV   79 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~--~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v   79 (241)
                      |+|+||+++|++.++++ |+++++. ++|+++.+++|||+++...  +++++|++|||+||+|++|++++|+|+..|++|
T Consensus       171 G~~aey~~v~~~~~~~i-P~~ls~~-~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~v  248 (447)
T 4a0s_A          171 GGLAEYGVVRASQLLPK-PAHLTWE-EAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIP  248 (447)
T ss_dssp             CSSBSEEEEEGGGEEEC-CTTSCHH-HHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEE
T ss_pred             CceeeeeecCHHHcEEC-CCCCCHH-HHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEE
Confidence            89999999999999999 9995554 3777889999999999643  789999999999999999999999999999999


Q ss_pred             EEEeCCHHHHHHHHHHcCCCeeecCCCchh------------------HHHHHHHHCCCCccEEEeCCCchhHHHHHHhh
Q 026217           80 VGSAGSKDKVDLLKNKFGFDEAFNYKEEPD------------------LDAALKRYFPEGINIYFENVGGKMLDAVLLNM  141 (241)
Q Consensus        80 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~------------------~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l  141 (241)
                      +++++++++.++++ ++|+++++++.+. +                  +.+.+++.+++++|++|||+|+..+..+++++
T Consensus       249 i~~~~~~~~~~~~~-~lGa~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~g~Dvvid~~G~~~~~~~~~~l  326 (447)
T 4a0s_A          249 VAVVSSAQKEAAVR-ALGCDLVINRAEL-GITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRVTFGLSVIVA  326 (447)
T ss_dssp             EEEESSHHHHHHHH-HTTCCCEEEHHHH-TCCTTGGGCHHHHHHHHHHHHHHHHHHHSSCCSEEEECSCHHHHHHHHHHS
T ss_pred             EEEeCCHHHHHHHH-hcCCCEEEecccc-cccccccccccccchhhhHHHHHHHHHhCCCceEEEECCCchHHHHHHHHH
Confidence            99999999999998 9999988876543 3                  36777777744899999999998899999999


Q ss_pred             ccCCEEEEEeeecccCCCCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHH
Q 026217          142 RIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAA  221 (241)
Q Consensus       142 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a  221 (241)
                      +++|+++.+|...+     .....+...++.+++++.|+....     .+.+.++++++.+|.+++.++++|||+++++|
T Consensus       327 ~~~G~iv~~G~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A  396 (447)
T 4a0s_A          327 RRGGTVVTCGSSSG-----YLHTFDNRYLWMKLKKIVGSHGAN-----HEEQQATNRLFESGAVVPAMSAVYPLAEAAEA  396 (447)
T ss_dssp             CTTCEEEESCCTTC-----SEEEEEHHHHHHTTCEEEECCSCC-----HHHHHHHHHHHHTTSSCCCEEEEEEGGGHHHH
T ss_pred             hcCCEEEEEecCCC-----cccccCHHHHHhCCCEEEecCCCC-----HHHHHHHHHHHHcCCcccceeEEEcHHHHHHH
Confidence            99999999987432     222355667788899999988765     45567899999999999999999999999999


Q ss_pred             HHHhhcCCCcceEEEEec
Q 026217          222 LVGLFSGRNVGKQVVEVA  239 (241)
Q Consensus       222 ~~~l~~~~~~gk~vv~~~  239 (241)
                      |+.+.+++..||+|+.+.
T Consensus       397 ~~~~~~~~~~GKvvv~~~  414 (447)
T 4a0s_A          397 CRVVQTSRQVGKVAVLCM  414 (447)
T ss_dssp             HHHHHTTCCSSEEEEESS
T ss_pred             HHHHhcCCCceEEEEEeC
Confidence            999999999999999875

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=100.00  E-value=1.6e-38  Score=255.77  Aligned_cols=226  Identities=19%  Similarity=0.230  Sum_probs=193.1

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHh--cCCCCCc-EEEEEcCCchHHHHHHHHHHHcCC
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEV--CSPKQGE-YVFVSAASGAVGQLVGQFAKLVGC   77 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~--~~~~~~~-~vlI~ga~g~~G~~avqla~~~g~   77 (241)
                      .|+|+||+++|++.++++ |++++.. ++|+++.+++|||+++...  .++++++ +|||+||+|++|++++|+|+.+|+
T Consensus        95 ~G~~aey~~v~~~~~~~i-P~~~~~~-~aa~l~~~~~ta~~al~~~~~~~~~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga  172 (324)
T 3nx4_A           95 WGGLAERARVKGDWLVAL-PAGLSSR-NAMIIGTAGFTAMLCVMALEDAGIRPQDGEVVVTGASGGVGSTAVALLHKLGY  172 (324)
T ss_dssp             CCSSBSEEEECGGGCEEC-CTTCCHH-HHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC
T ss_pred             CCceeeEEecCHHHcEEC-CCCCCHH-HHHHhhhHHHHHHHHHHHhhhcccCCCCCeEEEECCCcHHHHHHHHHHHHcCC
Confidence            489999999999999999 9995554 4889999999999998643  5577643 499999999999999999999999


Q ss_pred             EEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccC
Q 026217           78 YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYN  157 (241)
Q Consensus        78 ~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~  157 (241)
                      +|+++++++++.++++ ++|+++++|+++. +.   +++.+++++|++|||+|++.+..++++++++|+++.+|....  
T Consensus       173 ~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~~-~~---~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~G~~~~--  245 (324)
T 3nx4_A          173 QVAAVSGRESTHGYLK-SLGANRILSRDEF-AE---SRPLEKQLWAGAIDTVGDKVLAKVLAQMNYGGCVAACGLAGG--  245 (324)
T ss_dssp             CEEEEESCGGGHHHHH-HHTCSEEEEGGGS-SC---CCSSCCCCEEEEEESSCHHHHHHHHHTEEEEEEEEECCCTTC--
T ss_pred             EEEEEeCCHHHHHHHH-hcCCCEEEecCCH-HH---HHhhcCCCccEEEECCCcHHHHHHHHHHhcCCEEEEEecCCC--
Confidence            9999999999999999 9999999998764 33   555566689999999999999999999999999999987432  


Q ss_pred             CCCCCCccChHHHhhcceEEEEeecccc-cchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEE
Q 026217          158 NDKPEGVHNLTCLISKRIRMEGFLVPDY-FHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVV  236 (241)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv  236 (241)
                         .....+...++.+++++.++..... ++...+.++.+++++.+|++++. +++||++++++||+.+.+++..||+|+
T Consensus       246 ---~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~-~~~~~l~~~~~A~~~~~~~~~~gkvvv  321 (324)
T 3nx4_A          246 ---FALPTTVMPFILRNVRLQGVDSVMTPPARRAEAWARLVKDLPESFYAQA-ATEITLADAPKFADAIINNQVQGRTLV  321 (324)
T ss_dssp             ---SEEEEESHHHHHHCCEEEECCSTTCCHHHHHHHHHHHHHHSCHHHHHHH-EEEEEGGGHHHHHHHHHTTCCCSEEEE
T ss_pred             ---CCCCCCHHHHhhcCeEEEEEeccccChHHHHHHHHHHHHHHHcCCCCCC-ceeEeHHHHHHHHHHHHhCCCCceEEE
Confidence               1223456678889999999876543 34456788999999999999987 899999999999999999999999999


Q ss_pred             Eec
Q 026217          237 EVA  239 (241)
Q Consensus       237 ~~~  239 (241)
                      +++
T Consensus       322 ~~~  324 (324)
T 3nx4_A          322 KIK  324 (324)
T ss_dssp             ECC
T ss_pred             ecC
Confidence            874

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=100.00  E-value=7.8e-37  Score=250.70  Aligned_cols=226  Identities=19%  Similarity=0.259  Sum_probs=193.6

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVV   80 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~   80 (241)
                      |+|+||+++|++.++++ |+++++. ++|.+++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+
T Consensus       146 G~~aey~~v~~~~~~~i-P~~~~~~-~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi  222 (378)
T 3uko_A          146 STFSQYTVVHDVSVAKI-DPTAPLD-KVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGL-GTVGLAVAEGAKTAGASRII  222 (378)
T ss_dssp             CCSBSEEEEEGGGEEEC-CTTSCHH-HHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECC-SHHHHHHHHHHHHHTCSCEE
T ss_pred             cceEeEEEechhheEEC-CCCCCHH-HhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEE
Confidence            69999999999999999 9995555 488899999999999988889999999999997 9999999999999999 899


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCC--CchhHHHHHHHHCCCCccEEEeCCCc-hhHHHHHHhhccC-CEEEEEeeeccc
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYK--EEPDLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQ-GRITLCGMISQY  156 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~--~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~  156 (241)
                      +++++++++++++ ++|+++++|++  +. ++.+.+++.+++++|+||||+|+ ..+..++++++++ |+++.+|.... 
T Consensus       223 ~~~~~~~~~~~a~-~lGa~~vi~~~~~~~-~~~~~i~~~~~gg~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~~~-  299 (378)
T 3uko_A          223 GIDIDSKKYETAK-KFGVNEFVNPKDHDK-PIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS-  299 (378)
T ss_dssp             EECSCTTHHHHHH-TTTCCEEECGGGCSS-CHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCT-
T ss_pred             EEcCCHHHHHHHH-HcCCcEEEccccCch-hHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHhhccCCEEEEEcccCC-
Confidence            9999999999999 99999999987  45 89999999988899999999997 6889999999996 99999987431 


Q ss_pred             CCCCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCce--eccceeecCCcHHHHHHHhhcCCCcceE
Q 026217          157 NNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIV--YVEDKAEGLESAPAALVGLFSGRNVGKQ  234 (241)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~l~~~~~a~~~l~~~~~~gk~  234 (241)
                         ......+...++. +.++.|+....+.  ..+.+.++++++.+|+++  +.++++|||+++++||+.+.+++.. |+
T Consensus       300 ---~~~~~~~~~~~~~-~~~i~g~~~~~~~--~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~g~~~-Kv  372 (378)
T 3uko_A          300 ---GQEISTRPFQLVT-GRVWKGTAFGGFK--SRTQVPWLVEKYMNKEIKVDEYITHNLTLGEINKAFDLLHEGTCL-RC  372 (378)
T ss_dssp             ---TCCEEECTHHHHT-TCEEEECSGGGCC--HHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHTTCTTCS-EE
T ss_pred             ---CCccccCHHHHhc-CcEEEEEEecCCC--chHHHHHHHHHHHcCCCChhHheeeEeeHHHHHHHHHHHHCCCce-EE
Confidence               1122233444444 8889988765332  256788999999999887  4688999999999999999988865 99


Q ss_pred             EEEecC
Q 026217          235 VVEVAT  240 (241)
Q Consensus       235 vv~~~~  240 (241)
                      |+++++
T Consensus       373 vi~~~~  378 (378)
T 3uko_A          373 VLDTSK  378 (378)
T ss_dssp             EEETTC
T ss_pred             EEecCC
Confidence            999864

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=100.00  E-value=6.9e-37  Score=248.23  Aligned_cols=219  Identities=20%  Similarity=0.242  Sum_probs=192.9

Q ss_pred             CCccceEEeec-CCceeeecCCCCCcchhhhhcCchhHHHHHHHHH-hcCCCCCcEEEEEcCCchHHHHHHHHHHHc-CC
Q 026217            1 MTGWEEYSLVT-APRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFE-VCSPKQGEYVFVSAASGAVGQLVGQFAKLV-GC   77 (241)
Q Consensus         1 ~G~~ae~~~v~-~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~-~~~~~~~~~vlI~ga~g~~G~~avqla~~~-g~   77 (241)
                      .|+|+||+++| ++.++++ |+ ++.. ++|+++++++|||+++.+ ...+++|++|+|+|+ |++|++++|+|+.+ ++
T Consensus       122 ~G~~aey~~v~~~~~~~~~-p~-~~~~-~aa~l~~~~~ta~~~l~~~~~~~~~g~~vlv~Ga-G~vG~~a~qla~~~g~~  197 (345)
T 3jv7_A          122 PGSMAEYMIVDSARHLVPI-GD-LDPV-AAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGV-GGLGHVGIQILRAVSAA  197 (345)
T ss_dssp             CCSSBSEEEESCGGGEEEC-TT-CCHH-HHGGGGTTTHHHHHHHHTTGGGCCTTCEEEEECC-SHHHHHHHHHHHHHCCC
T ss_pred             CceeeEEEEecchhceEeC-CC-CCHH-HhhhhhhhHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCC
Confidence            48999999999 8999999 88 6665 488899999999999977 458999999999997 99999999999999 67


Q ss_pred             EEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCch-hHHHHHHhhccCCEEEEEeeecc
Q 026217           78 YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGGK-MLDAVLLNMRIQGRITLCGMISQ  155 (241)
Q Consensus        78 ~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~  155 (241)
                      +|+++++++++.++++ ++|+++++++++  ++.+.+++.+++ ++|+||||+|+. .+..++++++++|+++.+|....
T Consensus       198 ~Vi~~~~~~~~~~~~~-~lGa~~~i~~~~--~~~~~v~~~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~  274 (345)
T 3jv7_A          198 RVIAVDLDDDRLALAR-EVGADAAVKSGA--GAADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAG  274 (345)
T ss_dssp             EEEEEESCHHHHHHHH-HTTCSEEEECST--THHHHHHHHHGGGCEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCTT
T ss_pred             EEEEEcCCHHHHHHHH-HcCCCEEEcCCC--cHHHHHHHHhCCCCCeEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCC
Confidence            9999999999999999 999999998865  788899998887 999999999985 89999999999999999987442


Q ss_pred             cCCCCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEE
Q 026217          156 YNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQV  235 (241)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~v  235 (241)
                      .     ....+. .++.+++++.++....     .+.++++++++.+|.+++ +.++||++++++||+.+.+++..||+|
T Consensus       275 ~-----~~~~~~-~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~-~~~~~~l~~~~~A~~~~~~~~~~Gkvv  342 (345)
T 3jv7_A          275 A-----HAKVGF-FMIPFGASVVTPYWGT-----RSELMEVVALARAGRLDI-HTETFTLDEGPAAYRRLREGSIRGRGV  342 (345)
T ss_dssp             C-----CEEEST-TTSCTTCEEECCCSCC-----HHHHHHHHHHHHTTCCCC-CEEEECSTTHHHHHHHHHHTCCSSEEE
T ss_pred             C-----CCCcCH-HHHhCCCEEEEEecCC-----HHHHHHHHHHHHcCCCce-EEEEEcHHHHHHHHHHHHcCCCceeEE
Confidence            1     122333 6778999999988765     678999999999999998 458999999999999999999999999


Q ss_pred             EEe
Q 026217          236 VEV  238 (241)
Q Consensus       236 v~~  238 (241)
                      +++
T Consensus       343 v~p  345 (345)
T 3jv7_A          343 VVP  345 (345)
T ss_dssp             ECC
T ss_pred             eCC
Confidence            864

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=100.00  E-value=6.3e-37  Score=249.75  Aligned_cols=225  Identities=16%  Similarity=0.177  Sum_probs=194.7

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCC-----CCcEEEEEcCCchHHHHHHHHHHHc
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPK-----QGEYVFVSAASGAVGQLVGQFAKLV   75 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~-----~~~~vlI~ga~g~~G~~avqla~~~   75 (241)
                      .|+|+||+++|++.++++ |+++++. ++|+++++++|||+++.+.++++     +|++|||+||+|++|++++|+|+.+
T Consensus       118 ~G~~aey~~v~~~~~~~i-P~~~~~~-~aa~l~~~~~ta~~al~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~  195 (363)
T 4dvj_A          118 PGTNAEFHLVDERIVGRK-PKTLDWA-EAAALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQR  195 (363)
T ss_dssp             CCSCBSEEEEEGGGCEEC-CTTSCHH-HHHTSHHHHHHHHHHHHTTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHH
T ss_pred             CccceEEEEeCHHHeeEC-CCCCCHH-HHHhhhhHHHHHHHHHHHhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHh
Confidence            489999999999999999 9995555 48888999999999998888888     8999999999999999999999985


Q ss_pred             -CCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEeee
Q 026217           76 -GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMI  153 (241)
Q Consensus        76 -g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~  153 (241)
                       |++|+++++++++.++++ ++|+++++|+++  ++.+.+++..++++|+||||+|+ ..+..++++++++|+++.+|..
T Consensus       196 ~g~~Vi~~~~~~~~~~~~~-~lGad~vi~~~~--~~~~~v~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  272 (363)
T 4dvj_A          196 TDLTVIATASRPETQEWVK-SLGAHHVIDHSK--PLAAEVAALGLGAPAFVFSTTHTDKHAAEIADLIAPQGRFCLIDDP  272 (363)
T ss_dssp             CCSEEEEECSSHHHHHHHH-HTTCSEEECTTS--CHHHHHHTTCSCCEEEEEECSCHHHHHHHHHHHSCTTCEEEECSCC
T ss_pred             cCCEEEEEeCCHHHHHHHH-HcCCCEEEeCCC--CHHHHHHHhcCCCceEEEECCCchhhHHHHHHHhcCCCEEEEECCC
Confidence             889999999999999999 999999999875  68888888855599999999997 4889999999999999998542


Q ss_pred             cccCCCCCCCccChHHHhhcceEEEEeecccc-------cchhHHHHHHHHHHHHcCCceeccceee---cCCcHHHHHH
Q 026217          154 SQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY-------FHLYPKFLEMMIPRIKEGKIVYVEDKAE---GLESAPAALV  223 (241)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~g~~~~~~~~~~---~l~~~~~a~~  223 (241)
                               ...+...+..+++++.+......       .....+.++.+++++.+|++++.+..++   |++++++|++
T Consensus       273 ---------~~~~~~~~~~k~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~~~~l~~~~~A~~  343 (363)
T 4dvj_A          273 ---------SAFDIMLFKRKAVSIHHELMFTRPMFGTPDMSEQGRLLNDVSRLVDEGRLRTTLTNRLSPINAANLKQAHA  343 (363)
T ss_dssp             ---------SSCCGGGGTTTTCEEEECCTTHHHHHTCTTTHHHHHHHHHHHHHHHHTSSCCCEEEEECSCSHHHHHHHHH
T ss_pred             ---------CccchHHHhhccceEEEEEeeccccccCcchhhHHHHHHHHHHHHHCCCeeccccceecCCCHHHHHHHHH
Confidence                     13445667788999988665432       1223578999999999999999888766   8999999999


Q ss_pred             HhhcCCCcceEEEEec
Q 026217          224 GLFSGRNVGKQVVEVA  239 (241)
Q Consensus       224 ~l~~~~~~gk~vv~~~  239 (241)
                      .+.+++..||+|+++.
T Consensus       344 ~~~~~~~~GKvVl~~~  359 (363)
T 4dvj_A          344 LVESGTARGKVVIEGF  359 (363)
T ss_dssp             HHHHTCCCSEEEEECS
T ss_pred             HHHhCCCceEEEEeCc
Confidence            9999999999999975

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=100.00  E-value=2.3e-36  Score=246.39  Aligned_cols=234  Identities=31%  Similarity=0.505  Sum_probs=199.6

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEE
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVV   80 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~   80 (241)
                      .|+|+||+++|++.++++ |++  .. ++|+++.+++|||+++.+.+++++|++|+|+||+|++|++++|+|+..|++|+
T Consensus       117 ~G~~aey~~v~~~~~~~~-P~~--~~-~aaal~~~~~ta~~al~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi  192 (362)
T 2c0c_A          117 PGSFAEYTVVPASIATPV-PSV--KP-EYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVI  192 (362)
T ss_dssp             SCCSBSEEEEEGGGCEEC-SSS--CH-HHHTTTTHHHHHHHHHHHHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTCEEE
T ss_pred             CCcceeEEEEcHHHeEEC-CCC--ch-HhhcccchHHHHHHHHHHhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEE
Confidence            489999999999999999 876  33 68899999999999998888999999999999999999999999999999999


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCCC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDK  160 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~  160 (241)
                      ++++++++.+.++ ++|++.++|+++. ++.+.+++.+++++|++|||+|+..+..++++++++|+++.+|.....+...
T Consensus       193 ~~~~~~~~~~~~~-~~Ga~~~~~~~~~-~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~  270 (362)
T 2c0c_A          193 GTCSSDEKSAFLK-SLGCDRPINYKTE-PVGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISGYQTPT  270 (362)
T ss_dssp             EEESSHHHHHHHH-HTTCSEEEETTTS-CHHHHHHHHCTTCEEEEEECSCTHHHHHHHHHEEEEEEEEECCCGGGTTSSS
T ss_pred             EEECCHHHHHHHH-HcCCcEEEecCCh-hHHHHHHHhcCCCCCEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCCcCccc
Confidence            9999999999999 8999999999887 8888888887568999999999988999999999999999998754321100


Q ss_pred             ---CCC-ccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceeccc--------eeecCCcHHHHHHHhhcC
Q 026217          161 ---PEG-VHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVED--------KAEGLESAPAALVGLFSG  228 (241)
Q Consensus       161 ---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--------~~~~l~~~~~a~~~l~~~  228 (241)
                         ... ......++.+++++.|+....+.....+.++++++++.+|++++.+.        ..+||+++++|++.+.++
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~l~~~~~A~~~~~~~  350 (362)
T 2c0c_A          271 GLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMG  350 (362)
T ss_dssp             CCCCCCCTTHHHHHHHHTCEEEECCGGGCGGGHHHHHHHHHHHHHTTCSCCCEECSTTSTTCSCBSTTHHHHHHHHHHTT
T ss_pred             ccccccccccHHHHHhhcceEEEEEhhhhhhhHHHHHHHHHHHHHCCCeEeeeccccccccccccCHHHHHHHHHHHHcC
Confidence               000 01135678899999998766544445778999999999999998654        568999999999999998


Q ss_pred             CCcceEEEEecC
Q 026217          229 RNVGKQVVEVAT  240 (241)
Q Consensus       229 ~~~gk~vv~~~~  240 (241)
                      +..||+|+++++
T Consensus       351 ~~~gKvvv~~~~  362 (362)
T 2c0c_A          351 KNTGKIVVELPH  362 (362)
T ss_dssp             CCSBEEEEECCC
T ss_pred             CCCceEEEEcCC
Confidence            888999998753

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=8.8e-37  Score=250.43  Aligned_cols=221  Identities=18%  Similarity=0.220  Sum_probs=194.3

Q ss_pred             CccceEEee-cCCceeeecCCCCCcchh-hhhcCchhHHHHHHHHHhcC-CCCCcEEEEEcCCchHHHHHHHHHHHcCC-
Q 026217            2 TGWEEYSLV-TAPRLFKIQHTDMPLSYY-TGILGMPGMTAYAGFFEVCS-PKQGEYVFVSAASGAVGQLVGQFAKLVGC-   77 (241)
Q Consensus         2 G~~ae~~~v-~~~~~~~i~P~~~~~~~~-~a~l~~~~~ta~~~l~~~~~-~~~~~~vlI~ga~g~~G~~avqla~~~g~-   77 (241)
                      |+|+||+++ |++.++++ |++  ++++ +|++..+++|||+++ +.++ +++|++|||+| +|++|++++|+|+.+|+ 
T Consensus       147 G~~aey~~v~~~~~~~~i-P~~--l~~~~~Aa~~~~~~ta~~al-~~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~  221 (380)
T 1vj0_A          147 GCYSSHIVLDPETDVLKV-SEK--DDLDVLAMAMCSGATAYHAF-DEYPESFAGKTVVIQG-AGPLGLFGVVIARSLGAE  221 (380)
T ss_dssp             SSSBSEEEECTTCCEEEE-CTT--SCHHHHHHHTTHHHHHHHHH-HTCSSCCBTCEEEEEC-CSHHHHHHHHHHHHTTBS
T ss_pred             ccccceEEEcccceEEEC-CCC--CChHHhHhhhcHHHHHHHHH-HhcCCCCCCCEEEEEC-cCHHHHHHHHHHHHcCCc
Confidence            899999999 99999999 999  5554 677777999999999 5578 99999999999 79999999999999995 


Q ss_pred             EEEEEeCCHHHHHHHHHHcCCCeeecCC---CchhHHHHHHHHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEee
Q 026217           78 YVVGSAGSKDKVDLLKNKFGFDEAFNYK---EEPDLDAALKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus        78 ~v~~~~~~~~~~~~~~~~~g~~~~i~~~---~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      +|+++++++++.++++ ++|++++++++   +. ++.+.+++.+++ ++|+||||+|+ ..+..++++++++|+++.+|.
T Consensus       222 ~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~~~~~-~~~~~v~~~~~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~  299 (380)
T 1vj0_A          222 NVIVIAGSPNRLKLAE-EIGADLTLNRRETSVE-ERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGV  299 (380)
T ss_dssp             EEEEEESCHHHHHHHH-HTTCSEEEETTTSCHH-HHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCC
T ss_pred             eEEEEcCCHHHHHHHH-HcCCcEEEeccccCcc-hHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEEec
Confidence            9999999999999999 99999999987   65 888899999887 89999999996 688999999999999999987


Q ss_pred             ecccCCCCCCCccChHH-HhhcceEEEEeecccccchhHHHHHHHHHHHHc--CCceeccceeecCCcHHHHHHHhhcCC
Q 026217          153 ISQYNNDKPEGVHNLTC-LISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKE--GKIVYVEDKAEGLESAPAALVGLFSGR  229 (241)
Q Consensus       153 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~l~~~~~a~~~l~~~~  229 (241)
                      ...    ......+... ++.+++++.|+....     .+.++++++++.+  |++++.++++|||+++++|++.+.+++
T Consensus       300 ~~~----~~~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~  370 (380)
T 1vj0_A          300 AVP----QDPVPFKVYEWLVLKNATFKGIWVSD-----TSHFVKTVSITSRNYQLLSKLITHRLPLKEANKALELMESRE  370 (380)
T ss_dssp             CSC----CCCEEECHHHHTTTTTCEEEECCCCC-----HHHHHHHHHHHHTCHHHHGGGCCEEEEGGGHHHHHHHHHHTS
T ss_pred             CCC----CCCeeEchHHHHHhCCeEEEEeecCC-----HHHHHHHHHHHHhhcCCeeeEEEEEEeHHHHHHHHHHHhcCC
Confidence            430    1122345556 788999999987654     6789999999999  999999999999999999999999988


Q ss_pred             CcceEEEEec
Q 026217          230 NVGKQVVEVA  239 (241)
Q Consensus       230 ~~gk~vv~~~  239 (241)
                      .. |+|++++
T Consensus       371 ~~-Kvvl~~~  379 (380)
T 1vj0_A          371 AL-KVILYPE  379 (380)
T ss_dssp             CS-CEEEECC
T ss_pred             Cc-eEEEEeC
Confidence            78 9999875

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=100.00  E-value=1.7e-36  Score=245.24  Aligned_cols=220  Identities=22%  Similarity=0.314  Sum_probs=194.0

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVG   81 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~   81 (241)
                      |+|+||+++|++.++++ |+++++. ++|+++++++|||+++.+. ++++|++|+|+|| |++|++++|+|+..|++|++
T Consensus       118 G~~aey~~v~~~~~~~~-P~~~~~~-~aa~l~~~~~ta~~~l~~~-~~~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~  193 (339)
T 1rjw_A          118 GGYAEYCRAAADYVVKI-PDNLSFE-EAAPIFCAGVTTYKALKVT-GAKPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVA  193 (339)
T ss_dssp             CSSBSEEEEEGGGCEEC-CTTSCHH-HHGGGGTHHHHHHHHHHHH-TCCTTCEEEEECC-STTHHHHHHHHHHTTCEEEE
T ss_pred             CcceeeEEechHHEEEC-CCCCCHH-HhhhhhhhHHHHHHHHHhc-CCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEE
Confidence            89999999999999999 9995544 3788999999999999664 8999999999998 88999999999999999999


Q ss_pred             EeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeecccCCCC
Q 026217           82 SAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDK  160 (241)
Q Consensus        82 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~  160 (241)
                      +++++++.+.++ ++|+++++|+++. ++.+.+++.+ +++|++||++|. ..+..++++++++|+++.+|...+     
T Consensus       194 ~~~~~~~~~~~~-~lGa~~~~d~~~~-~~~~~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----  265 (339)
T 1rjw_A          194 VDIGDEKLELAK-ELGADLVVNPLKE-DAAKFMKEKV-GGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPE-----  265 (339)
T ss_dssp             ECSCHHHHHHHH-HTTCSEEECTTTS-CHHHHHHHHH-SSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSS-----
T ss_pred             EeCCHHHHHHHH-HCCCCEEecCCCc-cHHHHHHHHh-CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEecccCC-----
Confidence            999999999999 9999999998876 8888888776 589999999997 788999999999999999987432     


Q ss_pred             CCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEEEecC
Q 026217          161 PEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVAT  240 (241)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv~~~~  240 (241)
                       ....+...++.+++++.++....     .+.++++++++.+|.+++.+ ++|||+++++|++.+.+++..||+|+++++
T Consensus       266 -~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  338 (339)
T 1rjw_A          266 -EMPIPIFDTVLNGIKIIGSIVGT-----RKDLQEALQFAAEGKVKTII-EVQPLEKINEVFDRMLKGQINGRVVLTLED  338 (339)
T ss_dssp             -EEEEEHHHHHHTTCEEEECCSCC-----HHHHHHHHHHHHTTSCCCCE-EEEEGGGHHHHHHHHHTTCCSSEEEEECCC
T ss_pred             -CCccCHHHHHhCCcEEEEeccCC-----HHHHHHHHHHHHcCCCCccE-EEEcHHHHHHHHHHHHcCCCceEEEEecCC
Confidence             12355567788999999987654     57789999999999999864 789999999999999998888999999875

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=3.3e-36  Score=246.46  Aligned_cols=225  Identities=20%  Similarity=0.279  Sum_probs=194.7

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVV   80 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~   80 (241)
                      |+|+||+++|++.++++ |++++.. ++|++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+
T Consensus       143 G~~aey~~v~~~~~~~i-P~~~~~~-~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi  219 (371)
T 1f8f_A          143 SSFATYALSRENNTVKV-TKDVPIE-LLGPLGCGIQTGAGACINALKVTPASSFVTWGA-GAVGLSALLAAKVCGASIII  219 (371)
T ss_dssp             CCSBSEEEEEGGGEEEE-CTTSCGG-GTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESC-SHHHHHHHHHHHHHTCSEEE
T ss_pred             ccccCeEEechhheEEC-CCCCCHH-HHHHhcchHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEE
Confidence            79999999999999999 9995555 478889999999999987789999999999995 9999999999999999 799


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeecccCCC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNND  159 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~  159 (241)
                      +++++++++++++ ++|+++++++++. ++.+.+++.+++++|+|||++|+ ..+..++++++++|+++.+|....    
T Consensus       220 ~~~~~~~~~~~a~-~lGa~~vi~~~~~-~~~~~~~~~~~gg~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~----  293 (371)
T 1f8f_A          220 AVDIVESRLELAK-QLGATHVINSKTQ-DPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQL----  293 (371)
T ss_dssp             EEESCHHHHHHHH-HHTCSEEEETTTS-CHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCST----
T ss_pred             EECCCHHHHHHHH-HcCCCEEecCCcc-CHHHHHHHhcCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEeCCCCC----
Confidence            9999999999999 9999999999887 88899998887799999999997 688999999999999999987432    


Q ss_pred             CCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCcee--ccceeecCCcHHHHHHHhhcCCCcceEEEE
Q 026217          160 KPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQVVE  237 (241)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~l~~~~~~gk~vv~  237 (241)
                      ......+...++.+++++.++......  ..+.++++++++.+|++++  .+++ |||+++++|++.+.+++. +|+|++
T Consensus       294 ~~~~~~~~~~~~~~~~~i~g~~~~~~~--~~~~~~~~~~l~~~g~l~~~~~i~~-~~l~~~~~A~~~~~~~~~-~Kvvv~  369 (371)
T 1f8f_A          294 GTTAQFDVNDLLLGGKTILGVVEGSGS--PKKFIPELVRLYQQGKFPFDQLVKF-YAFDEINQAAIDSRKGIT-LKPIIK  369 (371)
T ss_dssp             TCCCCCCHHHHHHTTCEEEECSGGGSC--HHHHHHHHHHHHHTTSCCGGGGEEE-EEGGGHHHHHHHHHHTSC-SEEEEE
T ss_pred             CCccccCHHHHHhCCCEEEEeCCCCCc--hHHHHHHHHHHHHcCCCCcccceeE-ecHHHHHHHHHHHHCCCc-eEEEEe
Confidence            112245566778899999998764321  2567899999999999986  4667 999999999999998775 799998


Q ss_pred             ec
Q 026217          238 VA  239 (241)
Q Consensus       238 ~~  239 (241)
                      ++
T Consensus       370 ~~  371 (371)
T 1f8f_A          370 IA  371 (371)
T ss_dssp             CC
T ss_pred             eC
Confidence            64

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=100.00  E-value=3.2e-37  Score=250.47  Aligned_cols=234  Identities=26%  Similarity=0.328  Sum_probs=189.1

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcC-CEE
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVG-CYV   79 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g-~~v   79 (241)
                      .|+|+||+++|++.++++ |++++.. ++|+++++++|||+++.+.+++++|++|+|+||+|++|++++|+|+.+| ++|
T Consensus        94 ~G~~aey~~v~~~~~~~i-P~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V  171 (349)
T 4a27_A           94 YNAWAEVVCTPVEFVYKI-PDDMSFS-EAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTV  171 (349)
T ss_dssp             SCCSBSEEEEEGGGEEEC-CTTSCHH-HHHTSHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEE
T ss_pred             CCcceEEEEecHHHeEEC-CCCCCHH-HHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEE
Confidence            489999999999999999 9995555 3788899999999999888999999999999999999999999999995 599


Q ss_pred             EEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCC
Q 026217           80 VGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNND  159 (241)
Q Consensus        80 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~  159 (241)
                      ++++ ++++.+.++  +|++++++ ++. ++.+.+++.+++++|+||||+|++.+..++++++++|+++.+|........
T Consensus       172 ~~~~-~~~~~~~~~--~ga~~~~~-~~~-~~~~~~~~~~~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~  246 (349)
T 4a27_A          172 FGTA-STFKHEAIK--DSVTHLFD-RNA-DYVQEVKRISAEGVDIVLDCLCGDNTGKGLSLLKPLGTYILYGSSNMVTGE  246 (349)
T ss_dssp             EEEE-CGGGHHHHG--GGSSEEEE-TTS-CHHHHHHHHCTTCEEEEEEECC-------CTTEEEEEEEEEEC--------
T ss_pred             EEeC-CHHHHHHHH--cCCcEEEc-CCc-cHHHHHHHhcCCCceEEEECCCchhHHHHHHHhhcCCEEEEECCCcccccc
Confidence            9988 667777765  89999998 665 899999998877999999999988889999999999999999874321000


Q ss_pred             -----------CCCCccChHHHhhcceEEEEeecccc------cchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHH
Q 026217          160 -----------KPEGVHNLTCLISKRIRMEGFLVPDY------FHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAAL  222 (241)
Q Consensus       160 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~  222 (241)
                                 ......+...++.++.++.++....+      ....++.++++++++.+|++++.++++||++++++|+
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~  326 (349)
T 4a27_A          247 TKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGLYNQKKIKPVVDSLWALEEVKEAM  326 (349)
T ss_dssp             -----------------CHHHHHHHTCEEEEECHHHHHHTSCCHHHHHHHHHHHHHHHHTTSCCCCEEEEECGGGHHHHH
T ss_pred             cccccccccccccccccCHHHHhhcCceEEEEeehheeccccchHHHHHHHHHHHHHHHCCCccccccceECHHHHHHHH
Confidence                       01123556778889999999886543      1234788999999999999999999999999999999


Q ss_pred             HHhhcCCCcceEEEEecCC
Q 026217          223 VGLFSGRNVGKQVVEVATE  241 (241)
Q Consensus       223 ~~l~~~~~~gk~vv~~~~~  241 (241)
                      +.+.+++..||+|++++++
T Consensus       327 ~~l~~~~~~GKvvi~~~~~  345 (349)
T 4a27_A          327 QRIHDRGNIGKLILDVEKT  345 (349)
T ss_dssp             HHHHTTCCSSEEEEETTCC
T ss_pred             HHHHhCCCCceEEEecCCC
Confidence            9999999999999998753

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=100.00  E-value=4.2e-37  Score=250.48  Aligned_cols=228  Identities=21%  Similarity=0.343  Sum_probs=188.6

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEE
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVV   80 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~   80 (241)
                      .|+|+||+++|++.++++ |++++.. ++|+++++++|||+++.+.+++++|++|||+||+|++|++++|+|+.+|++++
T Consensus       119 ~G~~aey~~v~~~~~~~i-P~~l~~~-~Aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi  196 (357)
T 1zsy_A          119 LGTWRTEAVFSEEALIQV-PSDIPLQ-SAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTI  196 (357)
T ss_dssp             SCCSBSEEEEEGGGEEEE-CSSSCHH-HHHHTTSHHHHHHHHHHHSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEE
T ss_pred             CccceeEEecCHHHcEEC-CCCCCHH-HHhhhcccHHHHHHHHHHHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEE
Confidence            389999999999999999 9995544 37888899999999998878999999999999999999999999999999888


Q ss_pred             EEeCCH----HHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC--CccEEEeCCCchhHHHHHHhhccCCEEEEEeeec
Q 026217           81 GSAGSK----DKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE--GINIYFENVGGKMLDAVLLNMRIQGRITLCGMIS  154 (241)
Q Consensus        81 ~~~~~~----~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~--~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  154 (241)
                      ++++++    ++.++++ ++|+++++|+++.  ..+.+.+.+++  ++|+||||+|+.....++++++++|+++.+|...
T Consensus       197 ~~~~~~~~~~~~~~~~~-~lGa~~vi~~~~~--~~~~~~~~~~~~~~~Dvvid~~g~~~~~~~~~~l~~~G~iv~~G~~~  273 (357)
T 1zsy_A          197 NVVRDRPDIQKLSDRLK-SLGAEHVITEEEL--RRPEMKNFFKDMPQPRLALNCVGGKSSTELLRQLARGGTMVTYGGMA  273 (357)
T ss_dssp             EEECCCSCHHHHHHHHH-HTTCSEEEEHHHH--HSGGGGGTTSSSCCCSEEEESSCHHHHHHHHTTSCTTCEEEECCCCT
T ss_pred             EEecCccchHHHHHHHH-hcCCcEEEecCcc--hHHHHHHHHhCCCCceEEEECCCcHHHHHHHHhhCCCCEEEEEecCC
Confidence            887553    2567888 9999999886431  22345555544  5999999999877778999999999999998633


Q ss_pred             ccCCCCCCCccChHHHhhcceEEEEeecccc-----cchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCC
Q 026217          155 QYNNDKPEGVHNLTCLISKRIRMEGFLVPDY-----FHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGR  229 (241)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~  229 (241)
                      .     .....+...++.+++++.++....+     ++...+.++++++++.+|++++.+.++|||+++++|++.+.+++
T Consensus       274 ~-----~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~  348 (357)
T 1zsy_A          274 K-----QPVVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLTAPACSQVPLQDYQSALEASMKPF  348 (357)
T ss_dssp             T-----CCBCCCHHHHHHSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCCCEEEEEGGGHHHHHHHHTSSS
T ss_pred             C-----CCCCCCHHHHHhcCceEEEEEcchhcccCCHHHHHHHHHHHHHHHHcCCCcCccceEEcHHHHHHHHHHHHhCC
Confidence            2     1223455667789999999876543     22345678999999999999998889999999999999999988


Q ss_pred             CcceEEEEe
Q 026217          230 NVGKQVVEV  238 (241)
Q Consensus       230 ~~gk~vv~~  238 (241)
                      ..||+|+++
T Consensus       349 ~~gKvvl~~  357 (357)
T 1zsy_A          349 ISSKQILTM  357 (357)
T ss_dssp             CSSEEEEEC
T ss_pred             CCCcEEEeC
Confidence            889999974

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=100.00  E-value=1.1e-37  Score=253.13  Aligned_cols=226  Identities=19%  Similarity=0.266  Sum_probs=192.2

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCC-cEEEEEcCCchHHHHHHHHHHHcCCEE
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQG-EYVFVSAASGAVGQLVGQFAKLVGCYV   79 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~-~~vlI~ga~g~~G~~avqla~~~g~~v   79 (241)
                      .|+|+||+++|++.++++ |++++.. ++|++++.++|||.++ +.++ +++ ++++|+||+|++|++++|+|+..|++|
T Consensus       117 ~G~~aey~~v~~~~~~~i-P~~~~~~-~aa~l~~~~~ta~~~~-~~~~-~~g~~~vli~gg~g~vG~~a~qla~~~Ga~V  192 (349)
T 3pi7_A          117 WGSWAEYAVAEAAACIPL-LDTVRDE-DGAAMIVNPLTAIAMF-DIVK-QEGEKAFVMTAGASQLCKLIIGLAKEEGFRP  192 (349)
T ss_dssp             CCSSBSEEEEEGGGEEEC-CTTCCC---GGGSSHHHHHHHHHH-HHHH-HHCCSEEEESSTTSHHHHHHHHHHHHHTCEE
T ss_pred             CccceeeEeechHHeEEC-CCCCCHH-HHhhccccHHHHHHHH-HHHh-hCCCCEEEEeCCCcHHHHHHHHHHHHCCCEE
Confidence            489999999999999999 9996555 4888999999999766 4456 666 799999999999999999999999999


Q ss_pred             EEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCC
Q 026217           80 VGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNN  158 (241)
Q Consensus        80 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~  158 (241)
                      +++++++++.++++ ++|+++++|+++. ++.+.+++.+++ ++|++|||+|+..+..++++++++|+++.+|....   
T Consensus       193 i~~~~~~~~~~~~~-~~Ga~~~~~~~~~-~~~~~v~~~~~~~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~---  267 (349)
T 3pi7_A          193 IVTVRRDEQIALLK-DIGAAHVLNEKAP-DFEATLREVMKAEQPRIFLDAVTGPLASAIFNAMPKRARWIIYGRLDP---  267 (349)
T ss_dssp             EEEESCGGGHHHHH-HHTCSEEEETTST-THHHHHHHHHHHHCCCEEEESSCHHHHHHHHHHSCTTCEEEECCCSCC---
T ss_pred             EEEeCCHHHHHHHH-HcCCCEEEECCcH-HHHHHHHHHhcCCCCcEEEECCCChhHHHHHhhhcCCCEEEEEeccCC---
Confidence            99999999999999 9999999999887 999999998876 89999999999888999999999999999987432   


Q ss_pred             CCCCCccCh-HHHhhcceEEEEeecccc----cchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcce
Q 026217          159 DKPEGVHNL-TCLISKRIRMEGFLVPDY----FHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGK  233 (241)
Q Consensus       159 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk  233 (241)
                        .....+. ..++.+++++.++....+    +....+.++++++++.+|++++.++++|||+++++|++.+. ++..||
T Consensus       268 --~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~-~~~~gK  344 (349)
T 3pi7_A          268 --DATVIREPGQLIFQHKHIEGFWLSEWMRQFKERRGPAILEAQKRFSDGRWSTDVTAVVPLAEAIAWVPAEL-TKPNGK  344 (349)
T ss_dssp             --SCCCCSCTHHHHHSCCEEEECCHHHHHHHTHHHHHHHHHHC-CTTTTSSCCC-CCEEEEHHHHHHHHHHHH-TSSSSC
T ss_pred             --CCCCCCchhhhhccccEEEEEEehhhhhhCcHHHHHHHHHHHHHHHcCCcccccceEEcHHHHHHHHHHHh-CCCCce
Confidence              1223445 778899999999887654    23346778899999999999999999999999999999554 456799


Q ss_pred             EEEEe
Q 026217          234 QVVEV  238 (241)
Q Consensus       234 ~vv~~  238 (241)
                      +|+++
T Consensus       345 vvl~p  349 (349)
T 3pi7_A          345 VFIRP  349 (349)
T ss_dssp             EEEEC
T ss_pred             EEEeC
Confidence            99974

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=100.00  E-value=3.4e-37  Score=245.69  Aligned_cols=221  Identities=23%  Similarity=0.275  Sum_probs=187.2

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEE
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVV   80 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~   80 (241)
                      .|+|+||+++|++.++++ |++++.. ++|+++++++|||+++.+.+ +++|++|+|+||+|++|++++|+|+..|++|+
T Consensus        78 ~G~~aey~~v~~~~~~~i-P~~~~~~-~aa~l~~~~~ta~~~l~~~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi  154 (302)
T 1iz0_A           78 QGGLAERVAVPKGALLPL-PEGLSPE-EAAAFPVSFLTAYLALKRAQ-ARPGEKVLVQAAAGALGTAAVQVARAMGLRVL  154 (302)
T ss_dssp             SCCSBSEEEEEGGGCEEC-CTTCCHH-HHHTSHHHHHHHHHHHHHTT-CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEE
T ss_pred             CcceeeEEEEcHHHcEeC-CCCCCHH-HHHHhhhHHHHHHHHHHHhc-CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEE
Confidence            389999999999999999 9995444 37899999999999998777 99999999999999999999999999999999


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCC-chhHHHHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKE-EPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNND  159 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~-~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~  159 (241)
                      ++++++++.+.++ ++|+++++|+++ . ++.+.+     +++|++|| +|++.+..++++++++|+++.+|.....   
T Consensus       155 ~~~~~~~~~~~~~-~~ga~~~~~~~~~~-~~~~~~-----~~~d~vid-~g~~~~~~~~~~l~~~G~~v~~g~~~~~---  223 (302)
T 1iz0_A          155 AAASRPEKLALPL-ALGAEEAATYAEVP-ERAKAW-----GGLDLVLE-VRGKEVEESLGLLAHGGRLVYIGAAEGE---  223 (302)
T ss_dssp             EEESSGGGSHHHH-HTTCSEEEEGGGHH-HHHHHT-----TSEEEEEE-CSCTTHHHHHTTEEEEEEEEEC---------
T ss_pred             EEeCCHHHHHHHH-hcCCCEEEECCcch-hHHHHh-----cCceEEEE-CCHHHHHHHHHhhccCCEEEEEeCCCCC---
Confidence            9999999999998 999999998876 5 565555     47999999 9988899999999999999999875421   


Q ss_pred             CCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHH---HHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEE
Q 026217          160 KPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIP---RIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVV  236 (241)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv  236 (241)
                        ....+...++.+++++.++....+ ....+.++++++   ++.+|.+++.++++||++++++|++.+.+++..||+++
T Consensus       224 --~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv  300 (302)
T 1iz0_A          224 --VAPIPPLRLMRRNLAVLGFWLTPL-LREGALVEEALGFLLPRLGRELRPVVGPVFPFAEAEAAFRALLDRGHTGKVVV  300 (302)
T ss_dssp             ---CCCCTTHHHHTTCEEEECCHHHH-TTCHHHHHHHHHHHGGGBTTTBCCCEEEEEEGGGHHHHHHHTTCTTCCBEEEE
T ss_pred             --CCCcCHHHHHhCCCeEEEEeccch-hhhHHHHHHHHhhhHHHHcCCcccccceEEcHHHHHHHHHHHHcCCCCceEEE
Confidence              113445567889999999876432 223677888889   99999999999999999999999999998888899998


Q ss_pred             Ee
Q 026217          237 EV  238 (241)
Q Consensus       237 ~~  238 (241)
                      ++
T Consensus       301 ~~  302 (302)
T 1iz0_A          301 RL  302 (302)
T ss_dssp             EC
T ss_pred             eC
Confidence            64

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=100.00  E-value=4.8e-37  Score=250.90  Aligned_cols=229  Identities=17%  Similarity=0.269  Sum_probs=191.8

Q ss_pred             CCccceEEeecCCceeeecCC-----------CCCcchhhhhcCchhHHHHHHHHHhcCCCCC-cEEEEEcCCchHHHHH
Q 026217            1 MTGWEEYSLVTAPRLFKIQHT-----------DMPLSYYTGILGMPGMTAYAGFFEVCSPKQG-EYVFVSAASGAVGQLV   68 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~-----------~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~-~~vlI~ga~g~~G~~a   68 (241)
                      .|+|+||+++|++.++++ |+           ++++. ++|+++++++|||+++.+.+++++| ++|||+||+|++|+++
T Consensus       107 ~G~~aey~~v~~~~~~~~-P~~~~~~~~~~~~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~a  184 (364)
T 1gu7_A          107 FGTWRTHALGNDDDFIKL-PNPAQSKANGKPNGLTIN-QGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYA  184 (364)
T ss_dssp             CCCSBSEEEEEGGGEEEE-CCHHHHHHTTCSCCCCHH-HHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHH
T ss_pred             CCcchheEecCHHHeEEc-CCccccccccccCCCCHH-HHhhccccHHHHHHHHHHhhccCCCCcEEEECCCCcHHHHHH
Confidence            489999999999999999 87           75444 4788889999999999877789999 9999999999999999


Q ss_pred             HHHHHHcCCEEEEEeCCHHH----HHHHHHHcCCCeeecCCC---chhHHHHHHHHC--CC-CccEEEeCCCchhHHHHH
Q 026217           69 GQFAKLVGCYVVGSAGSKDK----VDLLKNKFGFDEAFNYKE---EPDLDAALKRYF--PE-GINIYFENVGGKMLDAVL  138 (241)
Q Consensus        69 vqla~~~g~~v~~~~~~~~~----~~~~~~~~g~~~~i~~~~---~~~~~~~i~~~~--~~-~~d~v~d~~g~~~~~~~~  138 (241)
                      +|+|+.+|++|+++++++++    .+.++ ++|+++++|+++   . ++.+++++.+  ++ ++|+||||+|+.....++
T Consensus       185 iqlak~~Ga~vi~~~~~~~~~~~~~~~~~-~lGa~~vi~~~~~~~~-~~~~~i~~~t~~~~~g~Dvvid~~G~~~~~~~~  262 (364)
T 1gu7_A          185 SQIGKLLNFNSISVIRDRPNLDEVVASLK-ELGATQVITEDQNNSR-EFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIA  262 (364)
T ss_dssp             HHHHHHHTCEEEEEECCCTTHHHHHHHHH-HHTCSEEEEHHHHHCG-GGHHHHHHHHHHHTCCEEEEEESSCHHHHHHHH
T ss_pred             HHHHHHCCCEEEEEecCccccHHHHHHHH-hcCCeEEEecCccchH-HHHHHHHHHhhccCCCceEEEECCCchhHHHHH
Confidence            99999999999999866554    67787 999999998875   4 7888888877  44 899999999987667889


Q ss_pred             HhhccCCEEEEEeeecccCCCCCCCccChHHHhhcceEEEEeecccc----cchhHHHHHHHHHHHHcCCceeccceeec
Q 026217          139 LNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY----FHLYPKFLEMMIPRIKEGKIVYVEDKAEG  214 (241)
Q Consensus       139 ~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  214 (241)
                      ++++++|+++.+|....     .....+...++.+++++.++....+    +....+.++++++++.+|.+++.+..+++
T Consensus       263 ~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~  337 (364)
T 1gu7_A          263 RKLNNNGLMLTYGGMSF-----QPVTIPTSLYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGKLTDAKSIETL  337 (364)
T ss_dssp             HTSCTTCEEEECCCCSS-----CCEEECHHHHHHSCCEEEECCHHHHHTTCHHHHHHHHHHHHHHHHHTCCCCCCCEEEE
T ss_pred             HHhccCCEEEEecCCCC-----CCcccCHHHHhhcCcEEEEEchhHhcccCHHHHHHHHHHHHHHHHcCCcccccceEEe
Confidence            99999999999987432     1223455667789999999876543    22235778999999999999998777877


Q ss_pred             CC---cHHHHHHHhhcCCCcceEEEEe
Q 026217          215 LE---SAPAALVGLFSGRNVGKQVVEV  238 (241)
Q Consensus       215 l~---~~~~a~~~l~~~~~~gk~vv~~  238 (241)
                      ++   ++++||+.+.+++..||+|+++
T Consensus       338 ~~~l~~~~~A~~~~~~~~~~gKvvv~~  364 (364)
T 1gu7_A          338 YDGTKPLHELYQDGVANSKDGKQLITY  364 (364)
T ss_dssp             CCSSSCHHHHHHHHHHTGGGSCEEEEC
T ss_pred             cCchhhHHHHHHHHHhCCCCceEEEeC
Confidence            65   9999999999988889999975

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=100.00  E-value=1.1e-35  Score=240.21  Aligned_cols=234  Identities=46%  Similarity=0.778  Sum_probs=197.2

Q ss_pred             CccceEEeecCCceeeecCCC----CCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC
Q 026217            2 TGWEEYSLVTAPRLFKIQHTD----MPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC   77 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~----~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~   77 (241)
                      |+|+||+++|++.++++ |++    +++...+|+++++++|||+++.+.+++++|++|+|+||+|++|++++|+++..|+
T Consensus        93 g~~aey~~v~~~~~~~i-P~~~~~~~~~~~a~a~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~  171 (333)
T 1v3u_A           93 SGWTTHFISDGKGLEKL-LTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC  171 (333)
T ss_dssp             CCSBSEEEESSTTEEEC-C--CCTTSCGGGGGTTTSHHHHHHHHHHHTTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTC
T ss_pred             CceEEEEEechHHeEEc-CcccccCCCHHHHHHHhCChHHHHHHHHHHhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCC
Confidence            78999999999999999 886    5555225899999999999998888999999999999999999999999999999


Q ss_pred             EEEEEeCCHHHHHHHHHHcCCCeeecCCC-chhHHHHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeeeccc
Q 026217           78 YVVGSAGSKDKVDLLKNKFGFDEAFNYKE-EPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQY  156 (241)
Q Consensus        78 ~v~~~~~~~~~~~~~~~~~g~~~~i~~~~-~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~  156 (241)
                      +|+++++++++.+.++ ++|++.++|+++ . ++.+.+.+.+++++|+++|++|+..+..++++++++|+++.+|.....
T Consensus       172 ~V~~~~~~~~~~~~~~-~~g~~~~~d~~~~~-~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~  249 (333)
T 1v3u_A          172 KVVGAAGSDEKIAYLK-QIGFDAAFNYKTVN-SLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAISVY  249 (333)
T ss_dssp             EEEEEESSHHHHHHHH-HTTCSEEEETTSCS-CHHHHHHHHCTTCEEEEEESSCHHHHHHHHTTEEEEEEEEECCCCC--
T ss_pred             EEEEEeCCHHHHHHHH-hcCCcEEEecCCHH-HHHHHHHHHhCCCCeEEEECCChHHHHHHHHHHhcCCEEEEEeccccc
Confidence            9999999999999997 999988899887 6 888888888766899999999998899999999999999999875421


Q ss_pred             CCCC-CCCccChHHHhhcceEEEEeecccc-cchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceE
Q 026217          157 NNDK-PEGVHNLTCLISKRIRMEGFLVPDY-FHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQ  234 (241)
Q Consensus       157 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~  234 (241)
                      +... +....+...++.+++++.|+....+ +....+.++++++++.+|++++.+..++||+++++|++.+.+++..||+
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKv  329 (333)
T 1v3u_A          250 NRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALRDLMKWVLEGKIQYHEHVTKGFENMPAAFIEMLNGANLGKA  329 (333)
T ss_dssp             -----CCBCCCHHHHHHTTCEEEECCGGGCCTHHHHHHHHHHHHHHHTTSSCCCEEEEECGGGHHHHHHHHHTTCCSBEE
T ss_pred             cCCCCCCCCcCHHHHhhcCceEEEEehhhcchHHHHHHHHHHHHHHHCCCccCccccccCHHHHHHHHHHHHcCCCCceE
Confidence            1000 1111255678889999999876543 2445778999999999999999887789999999999999998888999


Q ss_pred             EEEe
Q 026217          235 VVEV  238 (241)
Q Consensus       235 vv~~  238 (241)
                      |+++
T Consensus       330 vl~~  333 (333)
T 1v3u_A          330 VVTA  333 (333)
T ss_dssp             EEEC
T ss_pred             EEeC
Confidence            9874

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=100.00  E-value=9.2e-37  Score=245.13  Aligned_cols=216  Identities=25%  Similarity=0.281  Sum_probs=185.3

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEE
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVV   80 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~   80 (241)
                      .|+|+||++++++.++++ |++++.. ++|+++++++|||+++ +.+++++|++|+|+||+|++|++++|+|+.+|++|+
T Consensus       105 ~G~~aey~~v~~~~~~~i-P~~~~~~-~aa~l~~~~~ta~~al-~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi  181 (321)
T 3tqh_A          105 PCCYAEYVCASPDTIIQK-LEKLSFL-QAASLPTAGLTALQAL-NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVI  181 (321)
T ss_dssp             CCCSBSEEEECGGGEEEC-CTTSCHH-HHHHSHHHHHHHHHHH-HHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEE
T ss_pred             CCcceEEEEecHHHhccC-CCCCCHH-HHhhhhhHHHHHHHHH-HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEE
Confidence            389999999999999999 9995555 4888899999999999 778999999999999899999999999999999999


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCchh-HHHHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEEPD-LDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNND  159 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~-~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~  159 (241)
                      +++ ++++.++++ ++|+++++|+++. + +.+.+     .++|++|||+|++....++++++++|+++.+|....    
T Consensus       182 ~~~-~~~~~~~~~-~lGa~~~i~~~~~-~~~~~~~-----~g~D~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~~~----  249 (321)
T 3tqh_A          182 TTA-SKRNHAFLK-ALGAEQCINYHEE-DFLLAIS-----TPVDAVIDLVGGDVGIQSIDCLKETGCIVSVPTITA----  249 (321)
T ss_dssp             EEE-CHHHHHHHH-HHTCSEEEETTTS-CHHHHCC-----SCEEEEEESSCHHHHHHHGGGEEEEEEEEECCSTTH----
T ss_pred             EEe-ccchHHHHH-HcCCCEEEeCCCc-chhhhhc-----cCCCEEEECCCcHHHHHHHHhccCCCEEEEeCCCCc----
Confidence            998 667789998 9999999999886 6 55444     369999999999877999999999999999875221    


Q ss_pred             CCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEEEec
Q 026217          160 KPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVA  239 (241)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv~~~  239 (241)
                          .........+++++.++....    ..+.++.+++++.+|.+++.++++||++++++||+.+.+++..||+|++++
T Consensus       250 ----~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~~  321 (321)
T 3tqh_A          250 ----GRVIEVAKQKHRRAFGLLKQF----NIEELHYLGKLVSEDKLRIEISRIFQLSEAVTAHELLETGHVRGKLVFKVR  321 (321)
T ss_dssp             ----HHHHHHHHHTTCEEECCCCCC----CHHHHHHHHHHHHTTSSCCCEEEEECGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred             ----hhhhhhhhhcceEEEEEecCC----CHHHHHHHHHHHHCCCcccccccEEcHHHHHHHHHHHHcCCCCceEEEEeC
Confidence                111234567888888854322    267799999999999999999999999999999999999999999999864

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=100.00  E-value=1.4e-36  Score=248.53  Aligned_cols=235  Identities=14%  Similarity=0.175  Sum_probs=191.3

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHh-cCC-----------CCCcEEEEEcCCchHHHHH
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEV-CSP-----------KQGEYVFVSAASGAVGQLV   68 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~-~~~-----------~~~~~vlI~ga~g~~G~~a   68 (241)
                      .|+|+||+++|++.++++ |++++.. ++|+++++++|||+++.+. .++           ++|++|||+||+|++|+++
T Consensus       104 ~G~~aey~~v~~~~~~~~-P~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a  181 (371)
T 3gqv_A          104 QGAFSQYTVTRGRVWAKI-PKGLSFE-QAAALPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVT  181 (371)
T ss_dssp             CCSSBSEEECCTTCEEEC-CTTCCHH-HHHTSHHHHHHHHHHHHHHTCCCCCSSCSSCCCCSSCCEEEEESTTSHHHHHH
T ss_pred             CCcCcCeEEEchhheEEC-CCCCCHH-HHhhhhhhHHHHHHHHHhhccCCCCCccccccccCCCcEEEEECCCcHHHHHH
Confidence            489999999999999999 9995555 3788899999999999777 553           8999999999999999999


Q ss_pred             HHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCc-hhHHHHHHhh-ccCCE
Q 026217           69 GQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG-KMLDAVLLNM-RIQGR  146 (241)
Q Consensus        69 vqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l-~~~G~  146 (241)
                      +|+|+..|++|++++ +++++++++ ++|+++++|+++. ++.+.+++.+++++|++|||+|+ ..+..+++++ +++|+
T Consensus       182 ~qla~~~Ga~Vi~~~-~~~~~~~~~-~lGa~~vi~~~~~-~~~~~v~~~t~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~  258 (371)
T 3gqv_A          182 MQMLRLSGYIPIATC-SPHNFDLAK-SRGAEEVFDYRAP-NLAQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAGGH  258 (371)
T ss_dssp             HHHHHHTTCEEEEEE-CGGGHHHHH-HTTCSEEEETTST-THHHHHHHHTTTCCCEEEESSCSHHHHHHHHHHSCTTCEE
T ss_pred             HHHHHHCCCEEEEEe-CHHHHHHHH-HcCCcEEEECCCc-hHHHHHHHHccCCccEEEECCCchHHHHHHHHHhhcCCCE
Confidence            999999999999998 789999999 9999999999988 99999999998889999999997 6789999999 58999


Q ss_pred             EEEEeeecccCCCCC---CCccChHHHhhcceEEEEeecccc----cchhHHHHHHHHHHHHcCCceeccce--eecCCc
Q 026217          147 ITLCGMISQYNNDKP---EGVHNLTCLISKRIRMEGFLVPDY----FHLYPKFLEMMIPRIKEGKIVYVEDK--AEGLES  217 (241)
Q Consensus       147 ~v~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~l~~  217 (241)
                      ++.+|..........   ........++.+++++.++.....    .+...++++.+++++.+|++++.+..  .|||++
T Consensus       259 iv~~g~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~l~~  338 (371)
T 3gqv_A          259 YVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTWPAPYGRPGSEEERQFGEDLWRIAGQLVEDGRLVHHPLRVVQGGFDH  338 (371)
T ss_dssp             EEESSCCCC---CCSCEEEEECCGGGGGTSCBSCSTTTCBCCCHHHHHHHHHHHHHHHHHHHTTSSCCCCEEEEEECHHH
T ss_pred             EEEEecCccccccccccceeeeeeeeeccccccccccccccccHHHHHHHHHHHHHHHHHHHCCeeeCCcCeecCCcHHH
Confidence            999986432100011   011223457778888887754322    12334566789999999999987654  489999


Q ss_pred             HHHHHHHhhcCCCcc-eEEEEecC
Q 026217          218 APAALVGLFSGRNVG-KQVVEVAT  240 (241)
Q Consensus       218 ~~~a~~~l~~~~~~g-k~vv~~~~  240 (241)
                      +++||+.+.+++..| |+|+++++
T Consensus       339 ~~~A~~~l~~g~~~Gkkvvv~~~~  362 (371)
T 3gqv_A          339 IKQGMELVRKGELSGEKLVVRLEG  362 (371)
T ss_dssp             HHHHHHHHHTTCCSSCEEEEEECC
T ss_pred             HHHHHHHHHcCCCceEEEEEEeCC
Confidence            999999999998877 66777654

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=100.00  E-value=1.9e-36  Score=245.83  Aligned_cols=228  Identities=19%  Similarity=0.185  Sum_probs=188.9

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EE
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YV   79 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v   79 (241)
                      .|+||||+++|++.++++ |+++  +++.|++..++.++++++ +..++++|++|+|+|+ |++|++++|+|+++|+ .+
T Consensus       114 ~G~~aey~~v~~~~~~~i-P~~l--~~~~aa~l~~~~~~~~~~-~~~~~~~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~v  188 (346)
T 4a2c_A          114 DGGFAEYIVVKRKNVFAL-PTDM--PIEDGAFIEPITVGLHAF-HLAQGCENKNVIIIGA-GTIGLLAIQCAVALGAKSV  188 (346)
T ss_dssp             CCSSBSEEEEEGGGEEEC-CTTS--CGGGGGGHHHHHHHHHHH-HHTTCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEE
T ss_pred             CcccccccccchheEEEC-CCCC--CHHHHHhchHHHHHHHHH-HHhccCCCCEEEEECC-CCcchHHHHHHHHcCCcEE
Confidence            489999999999999999 9994  444444444555555555 6689999999999997 9999999999999999 56


Q ss_pred             EEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeecccC
Q 026217           80 VGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYN  157 (241)
Q Consensus        80 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~  157 (241)
                      ++++++++++++++ ++|+++++|+++. +..+.++..+++ ++|+++|++|+ ..+..++++++++|+++.+|..... 
T Consensus       189 i~~~~~~~k~~~a~-~lGa~~~i~~~~~-~~~~~~~~~~~~~g~d~v~d~~G~~~~~~~~~~~l~~~G~~v~~g~~~~~-  265 (346)
T 4a2c_A          189 TAIDISSEKLALAK-SFGAMQTFNSSEM-SAPQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQD-  265 (346)
T ss_dssp             EEEESCHHHHHHHH-HTTCSEEEETTTS-CHHHHHHHHGGGCSSEEEEECSCSHHHHHHHHHHCCTTCEEEECCCCSSC-
T ss_pred             EEEechHHHHHHHH-HcCCeEEEeCCCC-CHHHHHHhhcccCCcccccccccccchhhhhhheecCCeEEEEEeccCCC-
Confidence            78888999999999 9999999999988 888888888877 99999999995 6889999999999999999874321 


Q ss_pred             CCCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCce--eccceeecCCcHHHHHHHhhcCCCcceEE
Q 026217          158 NDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIV--YVEDKAEGLESAPAALVGLFSGRNVGKQV  235 (241)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~l~~~~~a~~~l~~~~~~gk~v  235 (241)
                        ......+...++.+++++.|+..........+.++.+++++.+|+++  +.++++|||+++++||+.+++++..||+|
T Consensus       266 --~~~~~~~~~~~~~k~~~i~G~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~lI~~~~~l~~~~~A~~~l~~~~~~GKvV  343 (346)
T 4a2c_A          266 --LHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDIARNAMPGKVL  343 (346)
T ss_dssp             --EEECHHHHHHHHHHTCEEEECCTTCCSSTTCHHHHHHHHHHHTTCSCCGGGEEEEECHHHHHHHHHHHTTSCCCSEEE
T ss_pred             --ccccccCHHHHhhceeEEEEEeccccCcchHHHHHHHHHHHHcCCCCCCccEeEEEeHHHHHHHHHHHHcCCCceEEE
Confidence              11123345677889999999876543333356789999999999885  56889999999999999999999999999


Q ss_pred             EEe
Q 026217          236 VEV  238 (241)
Q Consensus       236 v~~  238 (241)
                      |++
T Consensus       344 l~P  346 (346)
T 4a2c_A          344 LIP  346 (346)
T ss_dssp             ECC
T ss_pred             EEC
Confidence            864

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=100.00  E-value=5.8e-36  Score=245.44  Aligned_cols=222  Identities=16%  Similarity=0.221  Sum_probs=189.8

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVV   80 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~   80 (241)
                      |+||||+++|++.++++ |++++.. ++|++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+
T Consensus       148 G~~aey~~v~~~~~~~i-P~~l~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi  224 (376)
T 1e3i_A          148 SSFSQYTVVSEANLARV-DDEANLE-RVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGL-GCVGLSAIIGCKIAGASRII  224 (376)
T ss_dssp             CCSBSEEEEEGGGEEEC-CTTCCHH-HHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEE
T ss_pred             ccceeEEEeccccEEEC-CCCCCHH-HhhhhccHHHHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEE
Confidence            89999999999999999 9995544 378888999999999988889999999999996 9999999999999999 899


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCC--chhHHHHHHHHCCCCccEEEeCCCc-hhHHHHHHhhccC-CEEEEEeeeccc
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKE--EPDLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQ-GRITLCGMISQY  156 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~--~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~  156 (241)
                      +++++++++++++ ++|+++++|+++  . ++.+.+++.+++++|+||||+|+ ..+..++++++++ |+++.+|...  
T Consensus       225 ~~~~~~~~~~~a~-~lGa~~vi~~~~~~~-~~~~~v~~~~~~g~Dvvid~~G~~~~~~~~~~~l~~~~G~iv~~G~~~--  300 (376)
T 1e3i_A          225 AIDINGEKFPKAK-ALGATDCLNPRELDK-PVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKV--  300 (376)
T ss_dssp             EECSCGGGHHHHH-HTTCSEEECGGGCSS-CHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSS--
T ss_pred             EEcCCHHHHHHHH-HhCCcEEEccccccc-hHHHHHHHHhCCCccEEEECCCCHHHHHHHHHHhhcCCCEEEEECCCC--
Confidence            9999999999999 999999998874  4 68888888877789999999997 6889999999999 9999998721  


Q ss_pred             CCCCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCce--eccceeecCCcHHHHHHHhhcCCCcceE
Q 026217          157 NNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIV--YVEDKAEGLESAPAALVGLFSGRNVGKQ  234 (241)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~l~~~~~a~~~l~~~~~~gk~  234 (241)
                          .....+...++.++ ++.++....+.  ..+.+.++++++.+|+++  +.++++|||+++++|++.+.+++ .+|+
T Consensus       301 ----~~~~~~~~~~~~~~-~i~g~~~~~~~--~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~-~~Kv  372 (376)
T 1e3i_A          301 ----DEMTIPTVDVILGR-SINGTFFGGWK--SVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKEGK-SIRT  372 (376)
T ss_dssp             ----SEEEEEHHHHHTTC-EEEECSGGGCC--HHHHHHHHHHHHHTTSSCGGGGEEEEEEGGGHHHHHHHHHTTC-CSEE
T ss_pred             ----CccccCHHHhhccC-eEEEEecCCCC--cHHHHHHHHHHHHcCCCCcHHhEeeeecHHHHHHHHHHHhcCC-cceE
Confidence                11234555667777 88887654321  256789999999999987  46788999999999999998877 4799


Q ss_pred             EEEe
Q 026217          235 VVEV  238 (241)
Q Consensus       235 vv~~  238 (241)
                      |+++
T Consensus       373 vi~~  376 (376)
T 1e3i_A          373 ILTF  376 (376)
T ss_dssp             EEEC
T ss_pred             EEeC
Confidence            9874

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=100.00  E-value=4.3e-36  Score=244.47  Aligned_cols=221  Identities=17%  Similarity=0.163  Sum_probs=188.7

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EE
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YV   79 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v   79 (241)
                      .|+|+||+++|++.++++ |++  ++++.|++..++.|||+++ +.+++++|++|||+|+ |++|++++|+|+.+|+ +|
T Consensus       125 ~G~~aey~~v~~~~~~~i-P~~--l~~~~aa~~~~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~V  199 (356)
T 1pl8_A          125 DGNLCRFYKHNAAFCYKL-PDN--VTFEEGALIEPLSVGIHAC-RRGGVTLGHKVLVCGA-GPIGMVTLLVAKAMGAAQV  199 (356)
T ss_dssp             CCSCBSEEEEEGGGEEEC-CTT--SCHHHHHHHHHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEE
T ss_pred             CCccccEEEeehHHEEEC-cCC--CCHHHHHhhchHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEE
Confidence            389999999999999999 999  5544455557899999999 6789999999999996 9999999999999999 99


Q ss_pred             EEEeCCHHHHHHHHHHcCCCeeecCC---CchhHHHHHHHHCCCCccEEEeCCCch-hHHHHHHhhccCCEEEEEeeecc
Q 026217           80 VGSAGSKDKVDLLKNKFGFDEAFNYK---EEPDLDAALKRYFPEGINIYFENVGGK-MLDAVLLNMRIQGRITLCGMISQ  155 (241)
Q Consensus        80 ~~~~~~~~~~~~~~~~~g~~~~i~~~---~~~~~~~~i~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~  155 (241)
                      ++++++++++++++ ++|++++++++   .. ++.+.+++.+++++|+|||++|+. .+..++++++++|+++.+|... 
T Consensus       200 i~~~~~~~~~~~a~-~lGa~~vi~~~~~~~~-~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~-  276 (356)
T 1pl8_A          200 VVTDLSATRLSKAK-EIGADLVLQISKESPQ-EIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGS-  276 (356)
T ss_dssp             EEEESCHHHHHHHH-HTTCSEEEECSSCCHH-HHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCC-
T ss_pred             EEECCCHHHHHHHH-HhCCCEEEcCcccccc-hHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEecCC-
Confidence            99999999999999 99999999987   34 777888877656899999999974 7889999999999999998632 


Q ss_pred             cCCCCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCce--eccceeecCCcHHHHHHHhhcCCCcce
Q 026217          156 YNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIV--YVEDKAEGLESAPAALVGLFSGRNVGK  233 (241)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~l~~~~~a~~~l~~~~~~gk  233 (241)
                           .....+...++.+++++.++...      .+.++++++++.+|+++  +.++++|||+++++||+.++++ ..||
T Consensus       277 -----~~~~~~~~~~~~~~~~i~g~~~~------~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~-~~gK  344 (356)
T 1pl8_A          277 -----EMTTVPLLHAAIREVDIKGVFRY------CNTWPVAISMLASKSVNVKPLVTHRFPLEKALEAFETFKKG-LGLK  344 (356)
T ss_dssp             -----SCCCCCHHHHHHTTCEEEECCSC------SSCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHTT-CCSE
T ss_pred             -----CCCccCHHHHHhcceEEEEeccc------HHHHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHhCC-CceE
Confidence                 11235566788899999987653      23478899999999865  5777899999999999999988 7899


Q ss_pred             EEEEecCC
Q 026217          234 QVVEVATE  241 (241)
Q Consensus       234 ~vv~~~~~  241 (241)
                      +|++++++
T Consensus       345 vvi~~~~~  352 (356)
T 1pl8_A          345 IMLKCDPS  352 (356)
T ss_dssp             EEEECCTT
T ss_pred             EEEeCCCC
Confidence            99998753

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=100.00  E-value=3e-36  Score=246.33  Aligned_cols=222  Identities=19%  Similarity=0.256  Sum_probs=191.9

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EE
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YV   79 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v   79 (241)
                      .|+|+||+++|++.++++ |++  ++++.|+++.+++|||+++ +.+++++|++|||+|+ |++|++++|+|+.+|+ +|
T Consensus       136 ~G~~aey~~v~~~~~~~~-P~~--~~~~~aal~~~~~ta~~~l-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~V  210 (370)
T 4ej6_A          136 DGGFAEYVLVPRKQAFEI-PLT--LDPVHGAFCEPLACCLHGV-DLSGIKAGSTVAILGG-GVIGLLTVQLARLAGATTV  210 (370)
T ss_dssp             CCSSBSEEEEEGGGEEEE-CTT--SCTTGGGGHHHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEE
T ss_pred             CCcceEEEEEchhhEEEC-CCC--CCHHHHhhhhHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEE
Confidence            389999999999999999 999  5544556889999999999 6789999999999997 9999999999999999 99


Q ss_pred             EEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHH---HCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeecc
Q 026217           80 VGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKR---YFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQ  155 (241)
Q Consensus        80 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~---~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~  155 (241)
                      +++++++++.++++ ++|+++++|+++. ++.+.+++   .+++++|+||||+|+ ..+..++++++++|+++.+|....
T Consensus       211 i~~~~~~~~~~~a~-~lGa~~vi~~~~~-~~~~~i~~~~~~~~gg~Dvvid~~G~~~~~~~~~~~l~~~G~vv~~G~~~~  288 (370)
T 4ej6_A          211 ILSTRQATKRRLAE-EVGATATVDPSAG-DVVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQ  288 (370)
T ss_dssp             EEECSCHHHHHHHH-HHTCSEEECTTSS-CHHHHHHSTTSSSTTCEEEEEECSCCHHHHHHHHHHEEEEEEEEECSCCCT
T ss_pred             EEECCCHHHHHHHH-HcCCCEEECCCCc-CHHHHHHhhhhccCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEeccCC
Confidence            99999999999999 9999999999887 89999988   676799999999995 789999999999999999987432


Q ss_pred             cCCCCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCce--eccceeecCCcHHHHHHHhhcCC-Ccc
Q 026217          156 YNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIV--YVEDKAEGLESAPAALVGLFSGR-NVG  232 (241)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~l~~~~~a~~~l~~~~-~~g  232 (241)
                          ......+...++.+++++.|+....      ..++++++++.+|+++  +.++++|||+++++|++.+.+++ ..+
T Consensus       289 ----~~~~~~~~~~~~~~~~~i~g~~~~~------~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~  358 (370)
T 4ej6_A          289 ----GEKVEIEPFDILFRELRVLGSFINP------FVHRRAADLVATGAIEIDRMISRRISLDEAPDVISNPAAAGEVKV  358 (370)
T ss_dssp             ----TCCCCCCHHHHHHTTCEEEECCSCT------TCHHHHHHHHHTTCSCCGGGEEEEECGGGHHHHHHSCCCTTCSEE
T ss_pred             ----CCccccCHHHHHhCCcEEEEeccCh------HHHHHHHHHHHcCCCChhHcEEEEEEHHHHHHHHHHHHcCCCCeE
Confidence                1123466778899999999987643      2378899999999995  56889999999999999998876 557


Q ss_pred             eEEEEec
Q 026217          233 KQVVEVA  239 (241)
Q Consensus       233 k~vv~~~  239 (241)
                      |++++++
T Consensus       359 kvv~~~~  365 (370)
T 4ej6_A          359 LVIPSAE  365 (370)
T ss_dssp             EECCC--
T ss_pred             EEEEccc
Confidence            8888775

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=100.00  E-value=1.3e-35  Score=243.08  Aligned_cols=222  Identities=18%  Similarity=0.215  Sum_probs=188.3

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVV   80 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~   80 (241)
                      |+|+||+++|++.++++ |+++  ++++|++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+
T Consensus       145 G~~aey~~v~~~~~~~i-P~~l--~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi  220 (373)
T 1p0f_A          145 STFTEYTVVADIAVAKI-DPKA--PLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGL-GGVGFSAIVGCKAAGASRII  220 (373)
T ss_dssp             CCSBSEEEEETTSEEEE-CTTC--CGGGGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEE
T ss_pred             ccceeEEEEchhhEEEC-CCCC--ChhhhhhhhHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEE
Confidence            89999999999999999 9994  44467788899999999988889999999999996 9999999999999999 899


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCC--chhHHHHHHHHCCCCccEEEeCCCc-hhHHHHHHhhccC-CEEEEEeeeccc
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKE--EPDLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQ-GRITLCGMISQY  156 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~--~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~  156 (241)
                      +++++++++++++ ++|+++++|+++  . ++.+.+++.+++++|+||||+|+ +.+..++++++++ |+++.+|.... 
T Consensus       221 ~~~~~~~~~~~a~-~lGa~~vi~~~~~~~-~~~~~i~~~t~gg~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~-  297 (373)
T 1p0f_A          221 GVGTHKDKFPKAI-ELGATECLNPKDYDK-PIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASP-  297 (373)
T ss_dssp             EECSCGGGHHHHH-HTTCSEEECGGGCSS-CHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCT-
T ss_pred             EECCCHHHHHHHH-HcCCcEEEecccccc-hHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHHhcCCCEEEEEccCCC-
Confidence            9999999999999 999999999874  4 78889998887799999999997 7889999999999 99999987432 


Q ss_pred             CCCCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCce--eccceeecCCcHHHHHHHhhcCCCcceE
Q 026217          157 NNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIV--YVEDKAEGLESAPAALVGLFSGRNVGKQ  234 (241)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~l~~~~~a~~~l~~~~~~gk~  234 (241)
                         ......+...++.++ ++.++....+.   .+.++++++++.+|.++  +.++++|||+++++|++.+++++. +|+
T Consensus       298 ---~~~~~~~~~~~~~~~-~i~g~~~~~~~---~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kv  369 (373)
T 1p0f_A          298 ---NERLPLDPLLLLTGR-SLKGSVFGGFK---GEEVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQG-VRS  369 (373)
T ss_dssp             ---TCCEEECTHHHHTTC-EEEECSGGGCC---GGGHHHHHHHHHTTSSCGGGGEEEEECGGGHHHHHHHTTTSSC-SEE
T ss_pred             ---CCccccCHHHhccCc-eEEeeccCCcC---HHHHHHHHHHHHcCCCCchheEEEEeeHHHHHHHHHHHHCCCc-ceE
Confidence               111234455566677 88887654321   25688899999999987  467889999999999999988774 799


Q ss_pred             EEEe
Q 026217          235 VVEV  238 (241)
Q Consensus       235 vv~~  238 (241)
                      ++++
T Consensus       370 vi~~  373 (373)
T 1p0f_A          370 IMIY  373 (373)
T ss_dssp             EEEC
T ss_pred             EEeC
Confidence            9874

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.1e-35  Score=243.57  Aligned_cols=223  Identities=20%  Similarity=0.230  Sum_probs=190.3

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVV   80 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~   80 (241)
                      |+||||+++|++.++++ |+++++. ++|++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+
T Consensus       145 G~~aey~~v~~~~~~~~-P~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi  221 (374)
T 1cdo_A          145 STFSQYTVVNQIAVAKI-DPSAPLD-TVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGL-GAVGLAAVMGCHSAGAKRII  221 (374)
T ss_dssp             CCSBSEEEEEGGGEEEC-CTTCCHH-HHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEE
T ss_pred             ccceeEEEEchhheEEC-CCCCCHH-HHhhhccHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEE
Confidence            89999999999999999 9995554 478888999999999988889999999999996 9999999999999999 899


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCC--chhHHHHHHHHCCCCccEEEeCCCc-hhHHHHHHhhccC-CEEEEEeeeccc
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKE--EPDLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQ-GRITLCGMISQY  156 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~--~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~  156 (241)
                      +++++++++++++ ++|+++++|+++  . ++.+.+++.+++++|++||++|+ ..+..++++++++ |+++.+|.... 
T Consensus       222 ~~~~~~~~~~~~~-~lGa~~vi~~~~~~~-~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~-  298 (374)
T 1cdo_A          222 AVDLNPDKFEKAK-VFGATDFVNPNDHSE-PISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDL-  298 (374)
T ss_dssp             EECSCGGGHHHHH-HTTCCEEECGGGCSS-CHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSS-
T ss_pred             EEcCCHHHHHHHH-HhCCceEEeccccch-hHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCcEEEEEcCCCC-
Confidence            9999999999999 999999998874  4 68888888876789999999996 6889999999999 99999987432 


Q ss_pred             CCCCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCce--eccceeecCCcHHHHHHHhhcCCCcceE
Q 026217          157 NNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIV--YVEDKAEGLESAPAALVGLFSGRNVGKQ  234 (241)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~l~~~~~a~~~l~~~~~~gk~  234 (241)
                          .....+...++.++ ++.++....+.  ..+.++++++++.+|+++  +.++++|||+++++||+.+++++. +|+
T Consensus       299 ----~~~~~~~~~~~~~~-~i~g~~~~~~~--~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kv  370 (374)
T 1cdo_A          299 ----HDVATRPIQLIAGR-TWKGSMFGGFK--GKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMKHGKC-IRT  370 (374)
T ss_dssp             ----SCEEECHHHHHTTC-EEEECSGGGCC--HHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC-SEE
T ss_pred             ----CCcccCHHHHhcCC-eEEEEecCCCC--cHHHHHHHHHHHHcCCCChHHheeeEecHHHHHHHHHHHHCCCe-eEE
Confidence                11234455666777 88887654321  256789999999999987  467889999999999999998875 699


Q ss_pred             EEEe
Q 026217          235 VVEV  238 (241)
Q Consensus       235 vv~~  238 (241)
                      |+++
T Consensus       371 vi~~  374 (374)
T 1cdo_A          371 VLSL  374 (374)
T ss_dssp             EEEC
T ss_pred             EEeC
Confidence            9875

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=100.00  E-value=3.6e-36  Score=244.63  Aligned_cols=225  Identities=16%  Similarity=0.151  Sum_probs=189.9

Q ss_pred             CCccceEEeecCC--ceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-
Q 026217            1 MTGWEEYSLVTAP--RLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-   77 (241)
Q Consensus         1 ~G~~ae~~~v~~~--~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-   77 (241)
                      .|+|+||+++|++  .++++ |++++.. ++|.++.+++|||+++ +.+++++|++|||+|+ |++|++++|+|+.+|+ 
T Consensus       117 ~G~~aey~~v~~~~~~~~~i-P~~~~~~-~aa~~~~~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~  192 (352)
T 3fpc_A          117 DGVFGEFFHVNDADMNLAHL-PKEIPLE-AAVMIPDMMTTGFHGA-ELANIKLGDTVCVIGI-GPVGLMSVAGANHLGAG  192 (352)
T ss_dssp             CCSSBSCEEESSHHHHCEEC-CTTSCHH-HHTTTTTHHHHHHHHH-HHTTCCTTCCEEEECC-SHHHHHHHHHHHTTTCS
T ss_pred             CCcccceEEeccccCeEEEC-CCCCCHH-HHhhccchhHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCc
Confidence            3899999999986  89999 9995544 3777889999999999 6789999999999995 9999999999999999 


Q ss_pred             EEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeecc
Q 026217           78 YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQ  155 (241)
Q Consensus        78 ~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~  155 (241)
                      +|++++++++++++++ ++|+++++|+++. ++.+.+++.+++ ++|+|||++|+ +.+..++++++++|+++.+|...+
T Consensus       193 ~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~~-~~~~~v~~~t~g~g~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~  270 (352)
T 3fpc_A          193 RIFAVGSRKHCCDIAL-EYGATDIINYKNG-DIVEQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGE  270 (352)
T ss_dssp             SEEEECCCHHHHHHHH-HHTCCEEECGGGS-CHHHHHHHHTTTCCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCS
T ss_pred             EEEEECCCHHHHHHHH-HhCCceEEcCCCc-CHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEecccCC
Confidence            8999999999999999 9999999999887 999999999988 99999999998 689999999999999999987432


Q ss_pred             cCCCCCCCccC--hHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceec--cceeec-CCcHHHHHHHhhcCCC
Q 026217          156 YNNDKPEGVHN--LTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYV--EDKAEG-LESAPAALVGLFSGRN  230 (241)
Q Consensus       156 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~-l~~~~~a~~~l~~~~~  230 (241)
                      .    .....+  ......++.++.++....    ..+.++++++++.+|.+++.  ++++|| |+++++||+.+.+++.
T Consensus       271 ~----~~~~~~~~~~~~~~~~~~i~g~~~~~----~~~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~~~~  342 (352)
T 3fpc_A          271 G----DNIDIPRSEWGVGMGHKHIHGGLCPG----GRLRMERLIDLVFYKRVDPSKLVTHVFRGFDNIEKAFMLMKDKPK  342 (352)
T ss_dssp             C----SEEEEETTTTGGGTBCEEEEEBCCCC----HHHHHHHHHHHHHTTSCCGGGGEEEEEESTTHHHHHHHHHHSCCT
T ss_pred             C----CceecchhHhhhhccccEEEEeeccC----chhHHHHHHHHHHcCCCChhHhheeeCCCHHHHHHHHHHHHhCCC
Confidence            1    001111  112335778888876532    15678999999999999874  778999 9999999999998754


Q ss_pred             -cceEEEEec
Q 026217          231 -VGKQVVEVA  239 (241)
Q Consensus       231 -~gk~vv~~~  239 (241)
                       .+|+|++++
T Consensus       343 ~~~Kvvi~~~  352 (352)
T 3fpc_A          343 DLIKPVVILA  352 (352)
T ss_dssp             TCSEEEEECC
T ss_pred             CcEEEEEEeC
Confidence             489999874

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=100.00  E-value=1.3e-35  Score=243.14  Aligned_cols=224  Identities=22%  Similarity=0.280  Sum_probs=190.7

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVV   80 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~   80 (241)
                      |+|+||+++|++.++++ |+++++. ++|+++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+
T Consensus       143 G~~aey~~v~~~~~~~i-P~~l~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi  219 (373)
T 2fzw_A          143 STFSEYTVVADISVAKI-DPLAPLD-KVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGL-GGVGLAVIMGCKVAGASRII  219 (373)
T ss_dssp             CCSBSEEEEEGGGEEEC-CTTSCHH-HHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEE
T ss_pred             ccceeEEEEchhheEEC-CCCCCHH-HHhhhccHHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEE
Confidence            89999999999999999 9995554 478888999999999988889999999999996 9999999999999999 899


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCC--chhHHHHHHHHCCCCccEEEeCCCc-hhHHHHHHhhccC-CEEEEEeeeccc
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKE--EPDLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQ-GRITLCGMISQY  156 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~--~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~  156 (241)
                      +++++++++++++ ++|+++++|+++  . ++.+.+++.+++++|+||||+|+ ..+..++++++++ |+++.+|.... 
T Consensus       220 ~~~~~~~~~~~~~-~lGa~~vi~~~~~~~-~~~~~v~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~-  296 (373)
T 2fzw_A          220 GVDINKDKFARAK-EFGATECINPQDFSK-PIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAAS-  296 (373)
T ss_dssp             EECSCGGGHHHHH-HHTCSEEECGGGCSS-CHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCT-
T ss_pred             EEcCCHHHHHHHH-HcCCceEeccccccc-cHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHhhccCCcEEEEEecCCC-
Confidence            9999999999999 999999998874  4 68888998887799999999997 6889999999999 99999987432 


Q ss_pred             CCCCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCce--eccceeecCCcHHHHHHHhhcCCCcceE
Q 026217          157 NNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIV--YVEDKAEGLESAPAALVGLFSGRNVGKQ  234 (241)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~l~~~~~a~~~l~~~~~~gk~  234 (241)
                         ......+...++.++ ++.++....+.  ..+.++++++++.+|+++  +.++++|||+++++||+.+++++. +|+
T Consensus       297 ---~~~~~~~~~~~~~~~-~i~g~~~~~~~--~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kv  369 (373)
T 2fzw_A          297 ---GEEIATRPFQLVTGR-TWKGTAFGGWK--SVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKS-IRT  369 (373)
T ss_dssp             ---TCCEEECTHHHHTTC-EEEECSGGGCC--HHHHHHHHHHHHHTTSSCSGGGEEEEEEGGGHHHHHHHHHHTCC-SEE
T ss_pred             ---CceeeeCHHHHhcCC-EEEEeccCCCC--cHHHHHHHHHHHHcCCCCchheEeEEeeHHHHHHHHHHHhCCCc-ceE
Confidence               111234455666677 88887654321  256789999999999987  467889999999999999998775 699


Q ss_pred             EEEe
Q 026217          235 VVEV  238 (241)
Q Consensus       235 vv~~  238 (241)
                      ++++
T Consensus       370 vi~~  373 (373)
T 2fzw_A          370 VVKI  373 (373)
T ss_dssp             EEEC
T ss_pred             EEeC
Confidence            9874

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=100.00  E-value=2.6e-36  Score=245.11  Aligned_cols=215  Identities=17%  Similarity=0.183  Sum_probs=185.4

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVG   81 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~   81 (241)
                      |+|+||+++|++.++++ |+++++. ++|++++++.|||+++.+ .++++|++|||+|+ |++|++++|+|+.+|++|++
T Consensus       130 G~~aey~~v~~~~~~~i-P~~~~~~-~aa~l~~~~~ta~~~l~~-~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~  205 (348)
T 3two_A          130 GGYSNNIVVDENYVISV-DKNAPLE-KVAPLLCAGITTYSPLKF-SKVTKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSV  205 (348)
T ss_dssp             CSSBSEEEEEGGGCEEC-CTTSCHH-HHGGGGTHHHHHHHHHHH-TTCCTTCEEEEESC-SHHHHHHHHHHHHTTCEEEE
T ss_pred             ccccceEEechhhEEEC-CCCCCHH-HhhhhhhhHHHHHHHHHh-cCCCCCCEEEEECC-cHHHHHHHHHHHHCCCeEEE
Confidence            99999999999999999 9995555 488899999999999965 59999999999997 99999999999999999999


Q ss_pred             EeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCch-hHHHHHHhhccCCEEEEEeeecccCCCC
Q 026217           82 SAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGK-MLDAVLLNMRIQGRITLCGMISQYNNDK  160 (241)
Q Consensus        82 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~  160 (241)
                      ++++++++++++ ++|+++++ . +. +   .+.    .++|+|||++|+. .+..++++++++|+++.+|....    .
T Consensus       206 ~~~~~~~~~~~~-~lGa~~v~-~-~~-~---~~~----~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~----~  270 (348)
T 3two_A          206 FARNEHKKQDAL-SMGVKHFY-T-DP-K---QCK----EELDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPV----E  270 (348)
T ss_dssp             ECSSSTTHHHHH-HTTCSEEE-S-SG-G---GCC----SCEEEEEECCCSCCCHHHHHTTEEEEEEEEECCCCCG----G
T ss_pred             EeCCHHHHHHHH-hcCCCeec-C-CH-H---HHh----cCCCEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCC----C
Confidence            999999999999 99999888 3 22 2   111    1799999999986 89999999999999999987431    1


Q ss_pred             CCCccChHHHh-hcceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEEEec
Q 026217          161 PEGVHNLTCLI-SKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVA  239 (241)
Q Consensus       161 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv~~~  239 (241)
                      +....+...++ .+++++.|+....     .+.+.++++++.+|.+++.+ ++||++++++||+.+.+++..||+|++++
T Consensus       271 ~~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvVi~~~  344 (348)
T 3two_A          271 VAPVLSVFDFIHLGNRKVYGSLIGG-----IKETQEMVDFSIKHNIYPEI-DLILGKDIDTAYHNLTHGKAKFRYVIDMK  344 (348)
T ss_dssp             GCCEEEHHHHHHTCSCEEEECCSCC-----HHHHHHHHHHHHHTTCCCCE-EEECGGGHHHHHHHHHTTCCCSEEEEEGG
T ss_pred             CcccCCHHHHHhhCCeEEEEEecCC-----HHHHHHHHHHHHhCCCCceE-EEEEHHHHHHHHHHHHcCCCceEEEEecC
Confidence            11124556677 8999999998766     56789999999999999965 79999999999999999999999999987


Q ss_pred             CC
Q 026217          240 TE  241 (241)
Q Consensus       240 ~~  241 (241)
                      ++
T Consensus       345 ~~  346 (348)
T 3two_A          345 KS  346 (348)
T ss_dssp             GC
T ss_pred             Cc
Confidence            53

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=100.00  E-value=2.1e-35  Score=241.95  Aligned_cols=224  Identities=20%  Similarity=0.249  Sum_probs=190.5

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVV   80 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~   80 (241)
                      |+|+||+++|++.++++ |+++++. ++|++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+
T Consensus       144 G~~aey~~v~~~~~~~i-P~~l~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi  220 (374)
T 2jhf_A          144 STFSQYTVVDEISVAKI-DAASPLE-KVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGL-GGVGLSVIMGCKAAGAARII  220 (374)
T ss_dssp             CCSBSEEEEEGGGEEEC-CTTCCHH-HHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEE
T ss_pred             ccCeeEEEEchHHeEEC-CCCCCHH-HhhhhccHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEE
Confidence            89999999999999999 9995544 378888999999999988889999999999995 9999999999999999 899


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCC--chhHHHHHHHHCCCCccEEEeCCCc-hhHHHHHHhhccC-CEEEEEeeeccc
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKE--EPDLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQ-GRITLCGMISQY  156 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~--~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~  156 (241)
                      +++++++++++++ ++|+++++|+++  . ++.+.+++.+++++|+|||++|+ ..+..++++++++ |+++.+|.... 
T Consensus       221 ~~~~~~~~~~~~~-~lGa~~vi~~~~~~~-~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~-  297 (374)
T 2jhf_A          221 GVDINKDKFAKAK-EVGATECVNPQDYKK-PIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPD-  297 (374)
T ss_dssp             EECSCGGGHHHHH-HTTCSEEECGGGCSS-CHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCT-
T ss_pred             EEcCCHHHHHHHH-HhCCceEecccccch-hHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCcEEEEeccCCC-
Confidence            9999999999999 999999998874  4 68888988887789999999997 6889999999999 99999987432 


Q ss_pred             CCCCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCce--eccceeecCCcHHHHHHHhhcCCCcceE
Q 026217          157 NNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIV--YVEDKAEGLESAPAALVGLFSGRNVGKQ  234 (241)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~l~~~~~a~~~l~~~~~~gk~  234 (241)
                         ......+...++.++ ++.++....+.  ..+.++++++++.+|.++  +.++++|||+++++|++.+.+++. +|+
T Consensus       298 ---~~~~~~~~~~~~~~~-~i~g~~~~~~~--~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~Kv  370 (374)
T 2jhf_A          298 ---SQNLSMNPMLLLSGR-TWKGAIFGGFK--SKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGES-IRT  370 (374)
T ss_dssp             ---TCCEEECTHHHHTTC-EEEECSGGGCC--HHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC-SEE
T ss_pred             ---CCccccCHHHHhcCC-eEEEeccCCCC--hHHHHHHHHHHHHcCCCCchhheEEEEeHHHHHHHHHHHHCCCc-ceE
Confidence               111234455666777 88888654321  256789999999999987  467889999999999999998774 699


Q ss_pred             EEEe
Q 026217          235 VVEV  238 (241)
Q Consensus       235 vv~~  238 (241)
                      ++++
T Consensus       371 vi~~  374 (374)
T 2jhf_A          371 ILTF  374 (374)
T ss_dssp             EEEC
T ss_pred             EEeC
Confidence            9874

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.2e-35  Score=241.01  Aligned_cols=223  Identities=22%  Similarity=0.303  Sum_probs=193.4

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEE
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVV   80 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~   80 (241)
                      .|+|+||+++|++.++++ |+++++. ++|+++++++|||+++.+ .++++|++|||+||+|++|++++|+++..|++|+
T Consensus       122 ~G~~aey~~v~~~~~~~i-P~~~~~~-~aa~l~~~~~ta~~~l~~-~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~  198 (347)
T 2hcy_A          122 DGSFQQYATADAVQAAHI-PQGTDLA-QVAPILCAGITVYKALKS-ANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVL  198 (347)
T ss_dssp             CCSSBSEEEEETTTSEEE-CTTCCHH-HHGGGGTHHHHHHHHHHT-TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEE
T ss_pred             CCcceeEEEeccccEEEC-CCCCCHH-HHHHHhhhHHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCCcEE
Confidence            389999999999999999 9995544 378899999999999965 4899999999999999999999999999999999


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCC-CchhHHHHHHHHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeecccCC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYK-EEPDLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNN  158 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~-~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~  158 (241)
                      ++++++++.+.++ ++|++.++|+. .. ++.+.+++.+++++|++||++|. ..+..++++++++|+++.+|...+   
T Consensus       199 ~~~~~~~~~~~~~-~~g~~~~~d~~~~~-~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~---  273 (347)
T 2hcy_A          199 GIDGGEGKEELFR-SIGGEVFIDFTKEK-DIVGAVLKATDGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAG---  273 (347)
T ss_dssp             EEECSTTHHHHHH-HTTCCEEEETTTCS-CHHHHHHHHHTSCEEEEEECSSCHHHHHHHTTSEEEEEEEEECCCCTT---
T ss_pred             EEcCCHHHHHHHH-HcCCceEEecCccH-hHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEeCCCC---
Confidence            9999999999998 89999888887 34 78888887765589999999997 788999999999999999987431   


Q ss_pred             CCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEEEe
Q 026217          159 DKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  238 (241)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv~~  238 (241)
                        .....+...++.+++++.|+....     .+.++++++++.+|.+++.+ ++|||+++++||+.+.+++..||+|+++
T Consensus       274 --~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvv~~  345 (347)
T 2hcy_A          274 --AKCCSDVFNQVVKSISIVGSYVGN-----RADTREALDFFARGLVKSPI-KVVGLSTLPEIYEKMEKGQIVGRYVVDT  345 (347)
T ss_dssp             --CEEEEEHHHHHHTTCEEEECCCCC-----HHHHHHHHHHHHTTSCCCCE-EEEEGGGHHHHHHHHHTTCCSSEEEEES
T ss_pred             --CCCCCCHHHHhhCCcEEEEccCCC-----HHHHHHHHHHHHhCCCccce-EEEcHHHHHHHHHHHHcCCcceeEEEec
Confidence              112355567788999999987654     56789999999999999864 6899999999999999988889999987


Q ss_pred             c
Q 026217          239 A  239 (241)
Q Consensus       239 ~  239 (241)
                      +
T Consensus       346 ~  346 (347)
T 2hcy_A          346 S  346 (347)
T ss_dssp             C
T ss_pred             C
Confidence            5

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=5.5e-36  Score=244.60  Aligned_cols=218  Identities=22%  Similarity=0.255  Sum_probs=186.7

Q ss_pred             CccceEEeecCCceeeecCCC-CCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTD-MPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVV   80 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~-~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~   80 (241)
                      |+||||+++|++.++++ |++ +++. ++|+++++++|||+++.+ .++++|++|||+|+ |++|++++|+|+.+|++|+
T Consensus       147 G~~aeyv~v~~~~~~~~-P~~~ls~~-~aa~l~~~~~tA~~al~~-~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi  222 (369)
T 1uuf_A          147 GGYSQQIVVHERYVLRI-RHPQEQLA-AVAPLLCAGITTYSPLRH-WQAGPGKKVGVVGI-GGLGHMGIKLAHAMGAHVV  222 (369)
T ss_dssp             CSSBSEEEEEGGGCEEC-CSCGGGHH-HHGGGGTHHHHHHHHHHH-TTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEE
T ss_pred             CcccceEEEcchhEEEC-CCCCCCHH-HhhhhhhhHHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEE
Confidence            89999999999999999 988 7776 488999999999999966 68999999999997 9999999999999999999


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCch-hHHHHHHhhccCCEEEEEeeecccCCC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGK-MLDAVLLNMRIQGRITLCGMISQYNND  159 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~  159 (241)
                      +++++++++++++ ++|+++++|+++. ++.+++   . +++|+|||++|+. .+..++++++++|+++.+|....    
T Consensus       223 ~~~~~~~~~~~a~-~lGa~~vi~~~~~-~~~~~~---~-~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~----  292 (369)
T 1uuf_A          223 AFTTSEAKREAAK-ALGADEVVNSRNA-DEMAAH---L-KSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPAT----  292 (369)
T ss_dssp             EEESSGGGHHHHH-HHTCSEEEETTCH-HHHHTT---T-TCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC------
T ss_pred             EEeCCHHHHHHHH-HcCCcEEeccccH-HHHHHh---h-cCCCEEEECCCCHHHHHHHHHHhccCCEEEEeccCCC----
Confidence            9999999999999 8999999998875 544333   2 4799999999974 78999999999999999987432    


Q ss_pred             CCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEEEec
Q 026217          160 KPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVA  239 (241)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv~~~  239 (241)
                       .....+...++.+++++.++....     .+.++++++++.+|.+++.+. .|||+++++|++.+.+++..||+|++++
T Consensus       293 -~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~i~~~i~-~~~l~~~~~A~~~~~~~~~~gKvvi~~~  365 (369)
T 1uuf_A          293 -PHKSPEVFNLIMKRRAIAGSMIGG-----IPETQEMLDFCAEHGIVADIE-MIRADQINEAYERMLRGDVKYRFVIDNR  365 (369)
T ss_dssp             ------CHHHHHTTTCEEEECCSCC-----HHHHHHHHHHHHHHTCCCCEE-EECGGGHHHHHHHHHTTCSSSEEEEEGG
T ss_pred             -CccccCHHHHHhCCcEEEEeecCC-----HHHHHHHHHHHHhCCCCcceE-EEcHHHHHHHHHHHHcCCCceEEEEecC
Confidence             111345567788999999987654     567889999999999998764 7999999999999999888899999876


Q ss_pred             C
Q 026217          240 T  240 (241)
Q Consensus       240 ~  240 (241)
                      +
T Consensus       366 ~  366 (369)
T 1uuf_A          366 T  366 (369)
T ss_dssp             G
T ss_pred             C
Confidence            3

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=8.6e-36  Score=242.38  Aligned_cols=221  Identities=18%  Similarity=0.175  Sum_probs=188.2

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEE
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVV   80 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~   80 (241)
                      .|+|+||+++|++.++++ |++  ++++.|++..++.|||+++ +.+++++|++|||+|+ |++|++++|+|+.+|++|+
T Consensus       122 ~G~~aey~~v~~~~~~~i-P~~--~~~~~aa~~~~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi  196 (352)
T 1e3j_A          122 DGNLARYYVHAADFCHKL-PDN--VSLEEGALLEPLSVGVHAC-RRAGVQLGTTVLVIGA-GPIGLVSVLAAKAYGAFVV  196 (352)
T ss_dssp             CCSCBSEEEEEGGGEEEC-CTT--SCHHHHHTHHHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEE
T ss_pred             CccceeEEEeChHHeEEC-cCC--CCHHHHHhhchHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEE
Confidence            389999999999999999 999  5544455567899999999 6789999999999996 9999999999999999999


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCC-chhHHHHHHHHCC---C-CccEEEeCCCch-hHHHHHHhhccCCEEEEEeeec
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKE-EPDLDAALKRYFP---E-GINIYFENVGGK-MLDAVLLNMRIQGRITLCGMIS  154 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~-~~~~~~~i~~~~~---~-~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~  154 (241)
                      +++++++++++++ ++|+++++++++ . ++.+++++.++   + ++|++||++|+. .+..++++++++|+++.+|...
T Consensus       197 ~~~~~~~~~~~~~-~lGa~~~~~~~~~~-~~~~~i~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~  274 (352)
T 1e3j_A          197 CTARSPRRLEVAK-NCGADVTLVVDPAK-EEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGS  274 (352)
T ss_dssp             EEESCHHHHHHHH-HTTCSEEEECCTTT-SCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCS
T ss_pred             EEcCCHHHHHHHH-HhCCCEEEcCcccc-cHHHHHHHHhccccCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCC
Confidence            9999999999999 999999999885 5 77778887764   4 899999999974 7889999999999999998632


Q ss_pred             ccCCCCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCce--eccceeecCCcHHHHHHHhhcCC-Cc
Q 026217          155 QYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIV--YVEDKAEGLESAPAALVGLFSGR-NV  231 (241)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~l~~~~~a~~~l~~~~-~~  231 (241)
                      .      ....+...++.+++++.++...      .+.++++++++.+|+++  +.++++|||+++++||+.+.+++ ..
T Consensus       275 ~------~~~~~~~~~~~~~~~i~g~~~~------~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~  342 (352)
T 1e3j_A          275 Q------MVTVPLVNACAREIDIKSVFRY------CNDYPIALEMVASGRCNVKQLVTHSFKLEQTVDAFEAARKKADNT  342 (352)
T ss_dssp             S------CCCCCHHHHHTTTCEEEECCSC------SSCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHHCCTTC
T ss_pred             C------CccccHHHHHhcCcEEEEeccc------hHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCCCc
Confidence            1      1235567788899999987643      23478899999999864  57778999999999999999987 68


Q ss_pred             ceEEEEecC
Q 026217          232 GKQVVEVAT  240 (241)
Q Consensus       232 gk~vv~~~~  240 (241)
                      ||+|+++++
T Consensus       343 ~Kvvi~~~~  351 (352)
T 1e3j_A          343 IKVMISCRQ  351 (352)
T ss_dssp             SEEEEECCC
T ss_pred             eEEEEecCC
Confidence            999998863

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=100.00  E-value=1.2e-36  Score=247.99  Aligned_cols=219  Identities=16%  Similarity=0.143  Sum_probs=188.0

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEE
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVV   80 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~   80 (241)
                      .|+|+||+++|++.++++ |+++++. ++|+++++++|||+++.+ +++++|++|||+|+ |++|++++|+|+.+|++|+
T Consensus       132 ~G~~aey~~v~~~~~~~i-P~~~~~~-~aa~l~~~~~ta~~~l~~-~~~~~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi  207 (360)
T 1piw_A          132 QGGYANYVRVHEHFVVPI-PENIPSH-LAAPLLCGGLTVYSPLVR-NGCGPGKKVGIVGL-GGIGSMGTLISKAMGAETY  207 (360)
T ss_dssp             CCSSBSEEEEEGGGEEEC-CTTSCHH-HHGGGGTHHHHHHHHHHH-TTCSTTCEEEEECC-SHHHHHHHHHHHHHTCEEE
T ss_pred             CCcceeEEEEchhheEEC-CCCCCHH-HhhhhhhhHHHHHHHHHH-cCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEE
Confidence            389999999999999999 9995544 378899999999999966 79999999999998 9999999999999999999


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCc---hhHHHHHHhhccCCEEEEEeeecccC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG---KMLDAVLLNMRIQGRITLCGMISQYN  157 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~---~~~~~~~~~l~~~G~~v~~g~~~~~~  157 (241)
                      +++++++++++++ ++|+++++|+++..++.+.++    +++|+|||++|+   ..+..++++++++|+++.+|....  
T Consensus       208 ~~~~~~~~~~~~~-~lGa~~v~~~~~~~~~~~~~~----~~~D~vid~~g~~~~~~~~~~~~~l~~~G~iv~~g~~~~--  280 (360)
T 1piw_A          208 VISRSSRKREDAM-KMGADHYIATLEEGDWGEKYF----DTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQ--  280 (360)
T ss_dssp             EEESSSTTHHHHH-HHTCSEEEEGGGTSCHHHHSC----SCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCS--
T ss_pred             EEcCCHHHHHHHH-HcCCCEEEcCcCchHHHHHhh----cCCCEEEECCCCCcHHHHHHHHHHhcCCCEEEEecCCCC--
Confidence            9999999999999 899999998764213433333    479999999997   678899999999999999987431  


Q ss_pred             CCCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCCc--HHHHHHHhhcCCCcceEE
Q 026217          158 NDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLES--APAALVGLFSGRNVGKQV  235 (241)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~--~~~a~~~l~~~~~~gk~v  235 (241)
                          ....+...++.+++++.++....     .+.++++++++.+|++++.+ ++|||++  +++||+.+.+++..||+|
T Consensus       281 ----~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~i-~~~~l~~~~~~~A~~~~~~~~~~gKvv  350 (360)
T 1piw_A          281 ----HEMLSLKPYGLKAVSISYSALGS-----IKELNQLLKLVSEKDIKIWV-ETLPVGEAGVHEAFERMEKGDVRYRFT  350 (360)
T ss_dssp             ----SCCEEECGGGCBSCEEEECCCCC-----HHHHHHHHHHHHHTTCCCCE-EEEESSHHHHHHHHHHHHHTCCSSEEE
T ss_pred             ----ccccCHHHHHhCCeEEEEEecCC-----HHHHHHHHHHHHhCCCcceE-EEEeccHhHHHHHHHHHHCCCCceEEE
Confidence                11344456778999999987654     67789999999999999988 8999999  999999999988889999


Q ss_pred             EEecC
Q 026217          236 VEVAT  240 (241)
Q Consensus       236 v~~~~  240 (241)
                      +++++
T Consensus       351 i~~~~  355 (360)
T 1piw_A          351 LVGYD  355 (360)
T ss_dssp             EECCH
T ss_pred             EecCc
Confidence            99864

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=100.00  E-value=1.3e-35  Score=240.89  Aligned_cols=219  Identities=22%  Similarity=0.238  Sum_probs=188.1

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVV   80 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~   80 (241)
                      |+|+||+++|++.++++ |+++  +++.|++..+++|||+++ +.+++ +|++|||+|+ |++|++++|+|+.+|+ +|+
T Consensus       123 G~~aey~~v~~~~~~~i-P~~~--~~~~aa~~~~~~ta~~~l-~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi  196 (348)
T 2d8a_A          123 GVFAEYAVVPAQNIWKN-PKSI--PPEYATLQEPLGNAVDTV-LAGPI-SGKSVLITGA-GPLGLLGIAVAKASGAYPVI  196 (348)
T ss_dssp             CSSBSEEEEEGGGEEEC-CTTS--CHHHHTTHHHHHHHHHHH-TTSCC-TTCCEEEECC-SHHHHHHHHHHHHTTCCSEE
T ss_pred             CcCcceEEeChHHeEEC-CCCC--CHHHHHhhhHHHHHHHHH-HhcCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEE
Confidence            89999999999999999 9994  444344446889999999 66789 9999999998 9999999999999999 999


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeecccCC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNN  158 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~  158 (241)
                      ++++++++.+.++ ++|+++++|+++. ++.+.+++.+++ ++|+|||++|. ..+..++++++++|+++.+|....   
T Consensus       197 ~~~~~~~~~~~~~-~~Ga~~~~~~~~~-~~~~~v~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~---  271 (348)
T 2d8a_A          197 VSEPSDFRRELAK-KVGADYVINPFEE-DVVKEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPG---  271 (348)
T ss_dssp             EECSCHHHHHHHH-HHTCSEEECTTTS-CHHHHHHHHTTTSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSS---
T ss_pred             EECCCHHHHHHHH-HhCCCEEECCCCc-CHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCC---
Confidence            9999999999999 9999999999887 899999998877 89999999997 788999999999999999987432   


Q ss_pred             CCCCCccCh-HHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCc--eeccceeec-CCcHHHHHHHhhcCCCcceE
Q 026217          159 DKPEGVHNL-TCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKI--VYVEDKAEG-LESAPAALVGLFSGRNVGKQ  234 (241)
Q Consensus       159 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~-l~~~~~a~~~l~~~~~~gk~  234 (241)
                         ....+. ..++.+++++.|+....    ..+.++++++++.+|++  ++.++++|| |+++++|++.+++ +..||+
T Consensus       272 ---~~~~~~~~~~~~~~~~i~g~~~~~----~~~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~-~~~gKv  343 (348)
T 2d8a_A          272 ---KVTIDFNNLIIFKALTIYGITGRH----LWETWYTVSRLLQSGKLNLDPIITHKYKGFDKYEEAFELMRA-GKTGKV  343 (348)
T ss_dssp             ---CCCCCHHHHTTTTTCEEEECCCCC----SHHHHHHHHHHHHHTCCCCTTTEEEEEESSTTHHHHHHHHHT-TCCSEE
T ss_pred             ---CcccCchHHHHhCCcEEEEecCCC----cHHHHHHHHHHHHcCCCChHHhheeeCCCHHHHHHHHHHHhC-CCceEE
Confidence               123455 56778999999976532    15678999999999985  567778999 9999999999977 567899


Q ss_pred             EEEec
Q 026217          235 VVEVA  239 (241)
Q Consensus       235 vv~~~  239 (241)
                      |++++
T Consensus       344 vi~~~  348 (348)
T 2d8a_A          344 VFMLK  348 (348)
T ss_dssp             EEEC-
T ss_pred             EEeeC
Confidence            99864

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.9e-36  Score=244.04  Aligned_cols=227  Identities=22%  Similarity=0.300  Sum_probs=182.9

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHH--hcCCCCCc-EEEEEcCCchHHHHHHHHHHHcCC
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFE--VCSPKQGE-YVFVSAASGAVGQLVGQFAKLVGC   77 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~--~~~~~~~~-~vlI~ga~g~~G~~avqla~~~g~   77 (241)
                      .|+|+||+++|++.++++ |+++++. ++|+++++++|||.++..  ..++++|+ +|||+||+|++|++++|+|+.+|+
T Consensus        98 ~G~~aey~~v~~~~~~~~-P~~l~~~-~aa~~~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga  175 (328)
T 1xa0_A           98 FGGYSEYARLHGEWLVPL-PKGLTLK-EAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGY  175 (328)
T ss_dssp             CCSSBSEEEECGGGCEEC-CTTCCHH-HHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC
T ss_pred             CccceeEEEechHHeEEC-CCCCCHH-HhhhhhhhHHHHHHHHHHHhhcCCCCCCceEEEecCCCHHHHHHHHHHHHCCC
Confidence            389999999999999999 9995554 488888999999988753  36789997 999999999999999999999999


Q ss_pred             EEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccC
Q 026217           78 YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYN  157 (241)
Q Consensus        78 ~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~  157 (241)
                      +|++++++++++++++ ++|+++++|+++. + .+.++...++++|++|||+|++.+..++++++++|+++.+|...+. 
T Consensus       176 ~vi~~~~~~~~~~~~~-~lGa~~~i~~~~~-~-~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~G~~~~~-  251 (328)
T 1xa0_A          176 TVEASTGKAAEHDYLR-VLGAKEVLAREDV-M-AERIRPLDKQRWAAAVDPVGGRTLATVLSRMRYGGAVAVSGLTGGA-  251 (328)
T ss_dssp             CEEEEESCTTCHHHHH-HTTCSEEEECC-----------CCSCCEEEEEECSTTTTHHHHHHTEEEEEEEEECSCCSSS-
T ss_pred             EEEEEECCHHHHHHHH-HcCCcEEEecCCc-H-HHHHHHhcCCcccEEEECCcHHHHHHHHHhhccCCEEEEEeecCCC-
Confidence            9999999999999999 9999999998764 4 3445555555899999999998999999999999999999874321 


Q ss_pred             CCCCCCccChHHHhhcceEEEEeecccc-cchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEE
Q 026217          158 NDKPEGVHNLTCLISKRIRMEGFLVPDY-FHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVV  236 (241)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv  236 (241)
                          ....+...++.+++++.|+..... .+...+.++.+.+++.+| +++ +.++|||+++++||+.+++++..||+|+
T Consensus       252 ----~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~g-l~~-~~~~~~l~~~~~A~~~~~~~~~~gKvvv  325 (328)
T 1xa0_A          252 ----EVPTTVHPFILRGVSLLGIDSVYCPMDLRLRIWERLAGDLKPD-LER-IAQEISLAELPQALKRILRGELRGRTVV  325 (328)
T ss_dssp             ----CCCCCSHHHHHTTCEEEECCSSSCCHHHHHHHHHHHHTTTCCC-HHH-HEEEEEGGGHHHHHHHHHHTCCCSEEEE
T ss_pred             ----CCCCchhhhhhcCceEEEEecccCCHHHHHHHHHHHHHHHHcC-Cce-eeeEeCHHHHHHHHHHHHcCCCCCeEEE
Confidence                122344567889999999854322 223356677788888888 877 4689999999999999999888899999


Q ss_pred             Eec
Q 026217          237 EVA  239 (241)
Q Consensus       237 ~~~  239 (241)
                      +++
T Consensus       326 ~~~  328 (328)
T 1xa0_A          326 RLA  328 (328)
T ss_dssp             ECC
T ss_pred             EeC
Confidence            863

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=100.00  E-value=3.8e-36  Score=243.67  Aligned_cols=220  Identities=19%  Similarity=0.217  Sum_probs=188.8

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EE
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YV   79 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v   79 (241)
                      .|+|+||+++|++.++++ |++  ++++.|++..++.|||+++.+.+++ +|++|||+|| |++|++++|+|+.+|+ +|
T Consensus       118 ~G~~aey~~v~~~~~~~i-P~~--~~~~~aa~~~~~~ta~~~l~~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~V  192 (343)
T 2dq4_A          118 DGGFAEYVVVPAENAWVN-PKD--LPFEVAAILEPFGNAVHTVYAGSGV-SGKSVLITGA-GPIGLMAAMVVRASGAGPI  192 (343)
T ss_dssp             CCSSBSEEEEEGGGEEEE-CTT--SCHHHHTTHHHHHHHHHHHHSTTCC-TTSCEEEECC-SHHHHHHHHHHHHTTCCSE
T ss_pred             CCcceeEEEEchHHeEEC-CCC--CCHHHHHhhhHHHHHHHHHHHhCCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEE
Confidence            389999999999999999 999  5544444447888999999647889 9999999998 9999999999999999 99


Q ss_pred             EEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeecccCC
Q 026217           80 VGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNN  158 (241)
Q Consensus        80 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~  158 (241)
                      +++++++++.+.++ ++ +++++|+++. ++.+.+++.+++++|+|||++|+ ..+..++++++++|+++.+|...    
T Consensus       193 i~~~~~~~~~~~~~-~l-a~~v~~~~~~-~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~----  265 (343)
T 2dq4_A          193 LVSDPNPYRLAFAR-PY-ADRLVNPLEE-DLLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMALIPGGEARILGIPS----  265 (343)
T ss_dssp             EEECSCHHHHGGGT-TT-CSEEECTTTS-CHHHHHHHHHSSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCS----
T ss_pred             EEECCCHHHHHHHH-Hh-HHhccCcCcc-CHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCC----
Confidence            99999999999999 88 9999999887 88888988773489999999997 78899999999999999998732    


Q ss_pred             CCCCCccCh-HHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCc--eeccceeecCCcHHHHHHHhhcCCCcceEE
Q 026217          159 DKPEGVHNL-TCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKI--VYVEDKAEGLESAPAALVGLFSGRNVGKQV  235 (241)
Q Consensus       159 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~l~~~~~a~~~l~~~~~~gk~v  235 (241)
                        .....+. ..++.+++++.|+....    ..+.++++++++.+|.+  ++.++++|||+++++|++.+.+++. ||+|
T Consensus       266 --~~~~~~~~~~~~~~~~~i~g~~~~~----~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-gKvv  338 (343)
T 2dq4_A          266 --DPIRFDLAGELVMRGITAFGIAGRR----LWQTWMQGTALVYSGRVDLSPLLTHRLPLSRYREAFGLLASGQA-VKVI  338 (343)
T ss_dssp             --SCEEECHHHHTGGGTCEEEECCSCC----TTHHHHHHHHHHHHTSSCCGGGEEEEEEGGGHHHHHHHHHHSSC-SEEE
T ss_pred             --CCceeCcHHHHHhCceEEEEeecCC----CHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCc-eEEE
Confidence              1123555 67788999999986541    15678899999999984  6777899999999999999998877 9999


Q ss_pred             EEec
Q 026217          236 VEVA  239 (241)
Q Consensus       236 v~~~  239 (241)
                      ++++
T Consensus       339 ~~~~  342 (343)
T 2dq4_A          339 LDPK  342 (343)
T ss_dssp             EETT
T ss_pred             EeeC
Confidence            9875

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=100.00  E-value=7.5e-36  Score=243.72  Aligned_cols=220  Identities=16%  Similarity=0.149  Sum_probs=186.2

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCE-E
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-V   79 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~-v   79 (241)
                      .|+|+||+++|++.++++ |+ +++. ++|.+ .++.|||+++ +.+++++|++|||+|+ |++|++++|+|+.+|++ |
T Consensus       134 ~G~~aey~~v~~~~~~~i-P~-~s~~-~aa~~-~~~~ta~~~l-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~V  207 (363)
T 3m6i_A          134 PGLLRRYVNHPAVWCHKI-GN-MSYE-NGAML-EPLSVALAGL-QRAGVRLGDPVLICGA-GPIGLITMLCAKAAGACPL  207 (363)
T ss_dssp             CCSCBSEEEEEGGGEEEC-TT-CCHH-HHHHH-HHHHHHHHHH-HHHTCCTTCCEEEECC-SHHHHHHHHHHHHTTCCSE
T ss_pred             CccceeEEEEehhhEEEC-CC-CCHH-HHHhh-hHHHHHHHHH-HHcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEE
Confidence            489999999999999999 88 6655 35544 6889999999 6789999999999997 99999999999999996 9


Q ss_pred             EEEeCCHHHHHHHHHHcCCCeeecCC----CchhHHHHHHHHCCC-CccEEEeCCCch-hHHHHHHhhccCCEEEEEeee
Q 026217           80 VGSAGSKDKVDLLKNKFGFDEAFNYK----EEPDLDAALKRYFPE-GINIYFENVGGK-MLDAVLLNMRIQGRITLCGMI  153 (241)
Q Consensus        80 ~~~~~~~~~~~~~~~~~g~~~~i~~~----~~~~~~~~i~~~~~~-~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~  153 (241)
                      ++++++++++++++ ++ +++++++.    ...++.+.+++.+++ ++|+||||+|+. .+..++++++++|+++.+|..
T Consensus       208 i~~~~~~~~~~~a~-~l-~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~  285 (363)
T 3m6i_A          208 VITDIDEGRLKFAK-EI-CPEVVTHKVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVG  285 (363)
T ss_dssp             EEEESCHHHHHHHH-HH-CTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEEEECSCCHHHHHHHHHHSCTTCEEEECCCC
T ss_pred             EEECCCHHHHHHHH-Hh-chhcccccccccchHHHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEccC
Confidence            99999999999999 88 66666553    222788999999877 999999999985 789999999999999999874


Q ss_pred             cccCCCCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCc--eeccceeecCCcHHHHHHHhhcC-CC
Q 026217          154 SQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKI--VYVEDKAEGLESAPAALVGLFSG-RN  230 (241)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~l~~~~~a~~~l~~~-~~  230 (241)
                      ..      ....+...++.+++++.++...      .+.++++++++.+|.+  ++.++++|||+++++||+.+.++ ..
T Consensus       286 ~~------~~~~~~~~~~~~~~~i~g~~~~------~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~  353 (363)
T 3m6i_A          286 KN------EIQIPFMRASVREVDLQFQYRY------CNTWPRAIRLVENGLVDLTRLVTHRFPLEDALKAFETASDPKTG  353 (363)
T ss_dssp             CS------CCCCCHHHHHHHTCEEEECCSC------SSCHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHCGGGC
T ss_pred             CC------CccccHHHHHhcCcEEEEccCC------HHHHHHHHHHHHhCCCChHHceeeeeeHHHHHHHHHHHhccCCC
Confidence            32      2235667888999999998653      3457888999999998  55678999999999999999997 56


Q ss_pred             cceEEEEecC
Q 026217          231 VGKQVVEVAT  240 (241)
Q Consensus       231 ~gk~vv~~~~  240 (241)
                      .+|+|++.++
T Consensus       354 ~~Kvvi~~~~  363 (363)
T 3m6i_A          354 AIKVQIQSLE  363 (363)
T ss_dssp             CSEEEEECC-
T ss_pred             eEEEEEecCC
Confidence            7899999864

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=100.00  E-value=8.2e-36  Score=246.51  Aligned_cols=221  Identities=18%  Similarity=0.230  Sum_probs=190.6

Q ss_pred             CCccceEEeecCCceeeecCCCCCc-----chhhhhcCchhHHHHHHHHHh-cCCCCCcEEEEEcCCchHHHHHHHHHHH
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPL-----SYYTGILGMPGMTAYAGFFEV-CSPKQGEYVFVSAASGAVGQLVGQFAKL   74 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~-----~~~~a~l~~~~~ta~~~l~~~-~~~~~~~~vlI~ga~g~~G~~avqla~~   74 (241)
                      .|+|+||+++|++.++++ |++++.     ..++|+++.+++|||+++... +++++|++|||+|+ |++|++++|+|+.
T Consensus       158 ~G~~aey~~v~~~~~~~i-P~~~~~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~  235 (404)
T 3ip1_A          158 DGAFAEYVKVDAKYAWSL-RELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGG-GPIGLAAVAILKH  235 (404)
T ss_dssp             CCSSBSEEEEEGGGEEEC-GGGBTTBCTHHHHHHHHTHHHHHHHHHHHTTTSCCCCTTCEEEEECC-SHHHHHHHHHHHH
T ss_pred             CCCCcceEEechHHeEec-cccccccccccchhHHhhhhHHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHH
Confidence            489999999999999999 987542     234889999999999999755 48999999999997 9999999999999


Q ss_pred             cCC-EEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCch--hHHHHHHhh----ccCCE
Q 026217           75 VGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGGK--MLDAVLLNM----RIQGR  146 (241)
Q Consensus        75 ~g~-~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~--~~~~~~~~l----~~~G~  146 (241)
                      +|+ +|+++++++++.++++ ++|+++++|+++. ++.+.+++.+++ ++|+||||+|+.  .+..+.+++    +++|+
T Consensus       236 ~Ga~~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~~-~~~~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~  313 (404)
T 3ip1_A          236 AGASKVILSEPSEVRRNLAK-ELGADHVIDPTKE-NFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINAT  313 (404)
T ss_dssp             TTCSEEEEECSCHHHHHHHH-HHTCSEEECTTTS-CHHHHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCCCE
T ss_pred             cCCCEEEEECCCHHHHHHHH-HcCCCEEEcCCCC-CHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHHHhccCCCcE
Confidence            999 9999999999999999 9999999999887 999999999988 999999999986  667777777    99999


Q ss_pred             EEEEeeecccCCCCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCce--eccceeecCCcHHHHHHH
Q 026217          147 ITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIV--YVEDKAEGLESAPAALVG  224 (241)
Q Consensus       147 ~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~l~~~~~a~~~  224 (241)
                      ++.+|....      ....+...++.+++++.|+.....    .+.+..+++++.+| ++  +.++++|||+++++||+.
T Consensus       314 iv~~G~~~~------~~~~~~~~~~~~~~~i~g~~~~~~----~~~~~~~~~ll~~g-l~~~~~i~~~~~l~~~~~A~~~  382 (404)
T 3ip1_A          314 VAIVARADA------KIPLTGEVFQVRRAQIVGSQGHSG----HGTFPRVISLMASG-MDMTKIISKTVSMEEIPEYIKR  382 (404)
T ss_dssp             EEECSCCCS------CEEECHHHHHHTTCEEEECCCCCS----TTHHHHHHHHHHTT-CCGGGGCCEEECGGGHHHHHHH
T ss_pred             EEEeCCCCC------CCcccHHHHhccceEEEEecCCCc----hHHHHHHHHHHHcC-CChhheEEEEeeHHHHHHHHHH
Confidence            999987432      235677788899999999875331    35678899999999 65  467899999999999999


Q ss_pred             hhcCCCcceEEEEecC
Q 026217          225 LFSGRNVGKQVVEVAT  240 (241)
Q Consensus       225 l~~~~~~gk~vv~~~~  240 (241)
                      +.    .||+|+++++
T Consensus       383 ~~----~GKvvl~~~~  394 (404)
T 3ip1_A          383 LQ----TDKSLVKVTM  394 (404)
T ss_dssp             TT----TCTTCSCEEE
T ss_pred             Hh----CCcEEEecCC
Confidence            97    5788888763

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=100.00  E-value=2.7e-36  Score=266.53  Aligned_cols=226  Identities=17%  Similarity=0.218  Sum_probs=195.4

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEE
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVV   80 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~   80 (241)
                      .|+|+||++++++.++++ |+++++. ++|+++++++|||+++.+.+++++|++|||+||+|++|++++|+|+.+|++|+
T Consensus       297 ~G~~ae~~~v~~~~~~~i-P~~ls~~-~AA~l~~~~~Ta~~al~~~a~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~  374 (795)
T 3slk_A          297 PKAFGPLAVADHRMVTRI-PAGWSFA-RAASVPIVFLTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVY  374 (795)
T ss_dssp             SSCSSSEEEEETTSEEEC-CTTCCHH-HHHHHHHHHHHHHCCCCCCTCCCTTCCEEEESTTBHHHHHHHHHHHHTTCCEE
T ss_pred             cCCCcCEEEeehHHEEEC-CCCCCHH-HHHhhhHHHHHHHHHHHHHhCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEE
Confidence            389999999999999999 9995544 48899999999999998889999999999999999999999999999999999


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNND  159 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~  159 (241)
                      ++++++ +.+.++  +|+++++++++. ++.+.+++.+++ ++|+||||+|++.+..++++++++|+++.+|....    
T Consensus       375 ~t~~~~-k~~~l~--lga~~v~~~~~~-~~~~~i~~~t~g~GvDvVld~~gg~~~~~~l~~l~~~Gr~v~iG~~~~----  446 (795)
T 3slk_A          375 ATASED-KWQAVE--LSREHLASSRTC-DFEQQFLGATGGRGVDVVLNSLAGEFADASLRMLPRGGRFLELGKTDV----  446 (795)
T ss_dssp             EECCGG-GGGGSC--SCGGGEECSSSS-THHHHHHHHSCSSCCSEEEECCCTTTTHHHHTSCTTCEEEEECCSTTC----
T ss_pred             EEeChH-Hhhhhh--cChhheeecCCh-hHHHHHHHHcCCCCeEEEEECCCcHHHHHHHHHhcCCCEEEEeccccc----
Confidence            999654 555543  899999999988 999999999988 99999999999999999999999999999986321    


Q ss_pred             CCCCccChHHHhhcceEEEEeecccc-cchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEEEe
Q 026217          160 KPEGVHNLTCLISKRIRMEGFLVPDY-FHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  238 (241)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv~~  238 (241)
                       .  .........+++++.++++... +....+.++++++++.+|++++.+.++||++++++||+.+++++..||+|+++
T Consensus       447 -~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~l~~~g~l~p~~~~~~~l~~~~eA~~~l~~g~~~GKvVl~~  523 (795)
T 3slk_A          447 -R--DPVEVADAHPGVSYQAFDTVEAGPQRIGEMLHELVELFEGRVLEPLPVTAWDVRQAPEALRHLSQARHVGKLVLTM  523 (795)
T ss_dssp             -C--CHHHHHHHSSSEEEEECCGGGGHHHHHHHHHHHHHHHHHTTSCCCCCEEEEEGGGHHHHHHHHHHTCCCBEEEEEC
T ss_pred             -c--CcccccccCCCCEEEEeeccccCHHHHHHHHHHHHHHHHcCCcCCCcceeEcHHHHHHHHHHHhcCCccceEEEec
Confidence             0  1111123347888888776432 45567889999999999999999999999999999999999999999999987


Q ss_pred             c
Q 026217          239 A  239 (241)
Q Consensus       239 ~  239 (241)
                      .
T Consensus       524 ~  524 (795)
T 3slk_A          524 P  524 (795)
T ss_dssp             C
T ss_pred             C
Confidence            5

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=100.00  E-value=2.6e-35  Score=239.83  Aligned_cols=218  Identities=20%  Similarity=0.225  Sum_probs=185.7

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCC-CCcEEEEEcCCchHHHHHHHHHHHcCCEEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPK-QGEYVFVSAASGAVGQLVGQFAKLVGCYVV   80 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~-~~~~vlI~ga~g~~G~~avqla~~~g~~v~   80 (241)
                      |+|+||+++|++.++++ |++++.. ++|+++++++|||+++.+ .+++ +|++|+|+|+ |++|++++|+|+.+|++|+
T Consensus       133 G~~aey~~v~~~~~~~~-P~~ls~~-~aa~l~~~~~ta~~~l~~-~~~~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi  208 (357)
T 2cf5_A          133 GGFAKATVVHQKFVVKI-PEGMAVE-QAAPLLCAGVTVYSPLSH-FGLKQPGLRGGILGL-GGVGHMGVKIAKAMGHHVT  208 (357)
T ss_dssp             CSSBSCEEEEGGGEEEC-CSSCCHH-HHTGGGTHHHHHHHHHHH-TSTTSTTCEEEEECC-SHHHHHHHHHHHHHTCEEE
T ss_pred             CccccEEEechhhEEEC-cCCCCHH-HhhhhhhhHHHHHHHHHh-cCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEE
Confidence            89999999999999999 9995544 378999999999999965 6888 9999999995 9999999999999999999


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeecccCCC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNND  159 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~  159 (241)
                      ++++++++++.+++++|+++++++++.    +.+++.++ ++|+||||+|+ ..+..++++++++|+++.+|....    
T Consensus       209 ~~~~~~~~~~~~~~~lGa~~vi~~~~~----~~~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~----  279 (357)
T 2cf5_A          209 VISSSNKKREEALQDLGADDYVIGSDQ----AKMSELAD-SLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINN----  279 (357)
T ss_dssp             EEESSTTHHHHHHTTSCCSCEEETTCH----HHHHHSTT-TEEEEEECCCSCCCSHHHHTTEEEEEEEEECSCCSS----
T ss_pred             EEeCChHHHHHHHHHcCCceeeccccH----HHHHHhcC-CCCEEEECCCChHHHHHHHHHhccCCEEEEeCCCCC----
Confidence            999998898888768999999988763    24444443 79999999997 478999999999999999987432    


Q ss_pred             CCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEEEec
Q 026217          160 KPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVA  239 (241)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv~~~  239 (241)
                       +....+.. ++.+++++.++....     .+.++++++++.+|.+++.+ ++|||+++++|++.+++++..||+|++++
T Consensus       280 -~~~~~~~~-~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvi~~~  351 (357)
T 2cf5_A          280 -PLQFLTPL-LMLGRKVITGSFIGS-----MKETEEMLEFCKEKGLSSII-EVVKMDYVNTAFERLEKNDVRYRFVVDVE  351 (357)
T ss_dssp             -CCCCCHHH-HHHHTCEEEECCSCC-----HHHHHHHHHHHHHTTCCCCE-EEEEGGGHHHHHHHHHTTCSSSEEEEETT
T ss_pred             -CccccCHH-HHhCccEEEEEccCC-----HHHHHHHHHHHHcCCCCCce-EEEeHHHHHHHHHHHHCCCCceEEEEeCC
Confidence             11114444 788999999987654     56788999999999999876 69999999999999999988899999986


Q ss_pred             C
Q 026217          240 T  240 (241)
Q Consensus       240 ~  240 (241)
                      +
T Consensus       352 ~  352 (357)
T 2cf5_A          352 G  352 (357)
T ss_dssp             S
T ss_pred             c
Confidence            4

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=100.00  E-value=3.5e-37  Score=248.56  Aligned_cols=228  Identities=23%  Similarity=0.344  Sum_probs=186.8

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHH--hcCCCCCc-EEEEEcCCchHHHHHHHHHHHcCC
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFE--VCSPKQGE-YVFVSAASGAVGQLVGQFAKLVGC   77 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~--~~~~~~~~-~vlI~ga~g~~G~~avqla~~~g~   77 (241)
                      .|+|+||+++|++.++++ |+++++. ++|+++++++|||.++..  ..++++|+ +|||+||+|++|++++|+|+.+|+
T Consensus        99 ~G~~aey~~v~~~~~~~i-P~~l~~~-~aa~l~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga  176 (330)
T 1tt7_A           99 DGGLSEYASVPGDWLVPL-PQNLSLK-EAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGY  176 (330)
T ss_dssp             CCSSBSSEEECGGGEEEC-CTTCCHH-HHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTC
T ss_pred             CccceeEEEecHHHeEEC-CCCCCHH-HHhhccchHHHHHHHHHHHHhcCcCCCCceEEEECCCCHHHHHHHHHHHHCCC
Confidence            389999999999999999 9995555 488888999999988753  36789997 999999999999999999999999


Q ss_pred             EEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccC
Q 026217           78 YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYN  157 (241)
Q Consensus        78 ~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~  157 (241)
                      +|++++++++++++++ ++|+++++|+++. + .+.++..+++++|++|||+|++.+..++++++++|+++.+|...+  
T Consensus       177 ~vi~~~~~~~~~~~~~-~lGa~~v~~~~~~-~-~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~--  251 (330)
T 1tt7_A          177 DVVASTGNREAADYLK-QLGASEVISREDV-Y-DGTLKALSKQQWQGAVDPVGGKQLASLLSKIQYGGSVAVSGLTGG--  251 (330)
T ss_dssp             CEEEEESSSSTHHHHH-HHTCSEEEEHHHH-C-SSCCCSSCCCCEEEEEESCCTHHHHHHHTTEEEEEEEEECCCSSC--
T ss_pred             EEEEEeCCHHHHHHHH-HcCCcEEEECCCc-h-HHHHHHhhcCCccEEEECCcHHHHHHHHHhhcCCCEEEEEecCCC--
Confidence            9999999999999999 8999998876432 2 122333444489999999999889999999999999999987432  


Q ss_pred             CCCCCCccChHHHhhcceEEEEeecccc-cchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEE
Q 026217          158 NDKPEGVHNLTCLISKRIRMEGFLVPDY-FHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVV  236 (241)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv  236 (241)
                         .....+...++.+++++.|+..... .+...+.++.+.+++.+|.+++.++++|||+++++|++.+.+++..||+|+
T Consensus       252 ---~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi  328 (330)
T 1tt7_A          252 ---GEVPATVYPFILRGVSLLGIDSVYCPMDVRAAVWERMSSDLKPDQLLTIVDREVSLEETPGALKDILQNRIQGRVIV  328 (330)
T ss_dssp             ---SCEEECSHHHHTSCCEEEECCSSSCCHHHHHHHHHHTTTTSCCSCSTTSEEEEECSTTHHHHHHHTTTTCCSSEEEE
T ss_pred             ---CccCcchHHHHhcCeEEEEEeccccCHHHHHHHHHHHHHHHhcCCcccccceEEcHHHHHHHHHHHHcCCCCCeEEE
Confidence               1123444567889999999854322 223356677888888889999999899999999999999999888899998


Q ss_pred             Ee
Q 026217          237 EV  238 (241)
Q Consensus       237 ~~  238 (241)
                      ++
T Consensus       329 ~~  330 (330)
T 1tt7_A          329 KL  330 (330)
T ss_dssp             CC
T ss_pred             eC
Confidence            63

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=100.00  E-value=6.5e-35  Score=236.77  Aligned_cols=220  Identities=21%  Similarity=0.295  Sum_probs=193.3

Q ss_pred             CccceEEeecC-CceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHc-CCEE
Q 026217            2 TGWEEYSLVTA-PRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYV   79 (241)
Q Consensus         2 G~~ae~~~v~~-~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~-g~~v   79 (241)
                      |+|+||+++|+ +.++++  ++++.. ++|+++++++|||+++.+ +++++|++|+|+|++|++|++++|+++.. |++|
T Consensus       124 G~~aey~~v~~~~~~~~i--~~~~~~-~aa~l~~~~~ta~~~l~~-~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~V  199 (347)
T 1jvb_A          124 GAYAEYVIVPHYKYMYKL--RRLNAV-EAAPLTCSGITTYRAVRK-ASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATI  199 (347)
T ss_dssp             CSSBSEEEESCGGGEEEC--SSSCHH-HHGGGGTHHHHHHHHHHH-TTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEE
T ss_pred             CcceeEEEecCccceEEe--CCCCHH-HcccchhhHHHHHHHHHh-cCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeE
Confidence            89999999999 999999  564444 378899999999999954 89999999999999779999999999999 9999


Q ss_pred             EEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCC-CCccEEEeCCCch-hHHHHHHhhccCCEEEEEeeecccC
Q 026217           80 VGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFP-EGINIYFENVGGK-MLDAVLLNMRIQGRITLCGMISQYN  157 (241)
Q Consensus        80 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~-~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~  157 (241)
                      +++++++++.+.++ ++|+++++|+++. ++.+.+.+.++ +++|++||++|+. .+..++++++++|+++.+|....  
T Consensus       200 i~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~--  275 (347)
T 1jvb_A          200 IGVDVREEAVEAAK-RAGADYVINASMQ-DPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGA--  275 (347)
T ss_dssp             EEEESSHHHHHHHH-HHTCSEEEETTTS-CHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCC--
T ss_pred             EEEcCCHHHHHHHH-HhCCCEEecCCCc-cHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCC--
Confidence            99999999999998 9999999998887 88888888876 5899999999975 88899999999999999987431  


Q ss_pred             CCCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEEE
Q 026217          158 NDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVE  237 (241)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv~  237 (241)
                        .+  ..+...++.+++++.++....     .+.++++++++.+|.+++.++++|||+++++|++.+++++..||+|++
T Consensus       276 --~~--~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~  346 (347)
T 1jvb_A          276 --DL--HYHAPLITLSEIQFVGSLVGN-----QSDFLGIMRLAEAGKVKPMITKTMKLEEANEAIDNLENFKAIGRQVLI  346 (347)
T ss_dssp             --CC--CCCHHHHHHHTCEEEECCSCC-----HHHHHHHHHHHHTTSSCCCCEEEEEGGGHHHHHHHHHTTCCCSEEEEE
T ss_pred             --CC--CCCHHHHHhCceEEEEEeccC-----HHHHHHHHHHHHcCCCCceEEEEEcHHHHHHHHHHHHCCCCcceEEec
Confidence              11  455667788999999987654     678899999999999999999999999999999999999888999987


Q ss_pred             e
Q 026217          238 V  238 (241)
Q Consensus       238 ~  238 (241)
                      +
T Consensus       347 ~  347 (347)
T 1jvb_A          347 P  347 (347)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=100.00  E-value=2.4e-35  Score=239.05  Aligned_cols=216  Identities=22%  Similarity=0.207  Sum_probs=170.1

Q ss_pred             CCccceEEeec-CCceeeecCCCCCcchhhhhcCchhHHHHHHHHHh----cCCCCCcEEEEEcCCchHHHHHHHHHHHc
Q 026217            1 MTGWEEYSLVT-APRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEV----CSPKQGEYVFVSAASGAVGQLVGQFAKLV   75 (241)
Q Consensus         1 ~G~~ae~~~v~-~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~----~~~~~~~~vlI~ga~g~~G~~avqla~~~   75 (241)
                      .|+|+||+++| ++.++++  ++++.. ++|+++++++|||+++.+.    +++ +|++|||+|+ |++|++++|+|+.+
T Consensus       119 ~G~~aey~~v~~~~~~~~i--~~l~~~-~aa~l~~~~~ta~~al~~~~~~~~~~-~g~~VlV~Ga-G~vG~~aiqlak~~  193 (344)
T 2h6e_A          119 NGGFSEYMLVKSSRWLVKL--NSLSPV-EAAPLADAGTTSMGAIRQALPFISKF-AEPVVIVNGI-GGLAVYTIQILKAL  193 (344)
T ss_dssp             CCSSBSEEEESCGGGEEEE--SSSCHH-HHGGGGTHHHHHHHHHHHHHHHHTTC-SSCEEEEECC-SHHHHHHHHHHHHH
T ss_pred             CCcceeeEEecCcccEEEe--CCCCHH-HhhhhhhhhHHHHHHHHhhhhcccCC-CCCEEEEECC-CHHHHHHHHHHHHh
Confidence            38999999999 9999999  564444 3788999999999999764    288 9999999998 99999999999999


Q ss_pred             --CCEEEEEeCCHHHHHHHHHHcCCCeeecCCC-chhHHHHHHHHCCC-CccEEEeCCCch-hHHHHHHhhccCCEEEEE
Q 026217           76 --GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKE-EPDLDAALKRYFPE-GINIYFENVGGK-MLDAVLLNMRIQGRITLC  150 (241)
Q Consensus        76 --g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~-~~~~~~~i~~~~~~-~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~  150 (241)
                        |++|++++++++++++++ ++|+++++|+++ . ++.   .+.+++ ++|+||||+|+. .+..++++++++|+++.+
T Consensus       194 ~~Ga~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~~~-~~~---~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~  268 (344)
T 2h6e_A          194 MKNITIVGISRSKKHRDFAL-ELGADYVSEMKDAE-SLI---NKLTDGLGASIAIDLVGTEETTYNLGKLLAQEGAIILV  268 (344)
T ss_dssp             CTTCEEEEECSCHHHHHHHH-HHTCSEEECHHHHH-HHH---HHHHTTCCEEEEEESSCCHHHHHHHHHHEEEEEEEEEC
T ss_pred             cCCCEEEEEeCCHHHHHHHH-HhCCCEEeccccch-HHH---HHhhcCCCccEEEECCCChHHHHHHHHHhhcCCEEEEe
Confidence              999999999999999999 999999998765 4 443   344445 899999999986 899999999999999999


Q ss_pred             eeecccCCCCCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCC
Q 026217          151 GMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRN  230 (241)
Q Consensus       151 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~  230 (241)
                      |....      ....+...++.+++++.++....     .+.++++++++.+|++++.+ ++|||+++++|++.+++++.
T Consensus       269 g~~~~------~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~i~~~i-~~~~l~~~~~A~~~~~~~~~  336 (344)
T 2h6e_A          269 GMEGK------RVSLEAFDTAVWNKKLLGSNYGS-----LNDLEDVVRLSESGKIKPYI-IKVPLDDINKAFTNLDEGRV  336 (344)
T ss_dssp             CCCSS------CCCCCHHHHHHTTCEEEECCSCC-----HHHHHHHHHHHHTTSSCCCE-EEECC---------------
T ss_pred             CCCCC------CcccCHHHHhhCCcEEEEEecCC-----HHHHHHHHHHHHcCCCCcce-EEEeHHHHHHHHHHHHcCCC
Confidence            87431      12355667788999999987654     67789999999999999998 99999999999999999888


Q ss_pred             cceEEEEe
Q 026217          231 VGKQVVEV  238 (241)
Q Consensus       231 ~gk~vv~~  238 (241)
                      .||+|+++
T Consensus       337 ~gKvvl~~  344 (344)
T 2h6e_A          337 DGRQVITP  344 (344)
T ss_dssp             -CEEEECC
T ss_pred             ceEEEEeC
Confidence            89999863

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=3.6e-35  Score=242.42  Aligned_cols=227  Identities=20%  Similarity=0.229  Sum_probs=188.1

Q ss_pred             CccceEEeecCC--ceeeecCCCCCcchh----hhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHc
Q 026217            2 TGWEEYSLVTAP--RLFKIQHTDMPLSYY----TGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLV   75 (241)
Q Consensus         2 G~~ae~~~v~~~--~~~~i~P~~~~~~~~----~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~   75 (241)
                      |+||||+++|+.  .++++ |++++.. +    +|+++.+++|||+++. .+++++|++|||+|+ |++|++++|+|+.+
T Consensus       133 G~~aey~~v~~~~~~~~~~-P~~~~~~-~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~Ga-G~vG~~aiqlAk~~  208 (398)
T 1kol_A          133 GGQAEYVLVPYADFNLLKL-PDRDKAM-EKIRDLTCLSDILPTGYHGAV-TAGVGPGSTVYVAGA-GPVGLAAAASARLL  208 (398)
T ss_dssp             CCSBSEEEESSHHHHCEEC-SCHHHHH-HTHHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEECC-SHHHHHHHHHHHHT
T ss_pred             ceeeeEEEecchhCeEEEC-CCCcchh-hhcccccccccHHHHHHHHHH-HcCCCCCCEEEEECC-cHHHHHHHHHHHHC
Confidence            899999999987  89999 9984333 2    5789999999999995 689999999999995 99999999999999


Q ss_pred             CC-EEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCch----------------hHHHH
Q 026217           76 GC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGGK----------------MLDAV  137 (241)
Q Consensus        76 g~-~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~----------------~~~~~  137 (241)
                      |+ +|++++++++++++++ ++|++ ++++++..++.+.+++.+++ ++|+||||+|+.                .+..+
T Consensus       209 Ga~~Vi~~~~~~~~~~~a~-~lGa~-~i~~~~~~~~~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~  286 (398)
T 1kol_A          209 GAAVVIVGDLNPARLAHAK-AQGFE-IADLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSL  286 (398)
T ss_dssp             TCSEEEEEESCHHHHHHHH-HTTCE-EEETTSSSCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHH
T ss_pred             CCCeEEEEcCCHHHHHHHH-HcCCc-EEccCCcchHHHHHHHHhCCCCCCEEEECCCCcccccccccccccchHHHHHHH
Confidence            99 7999999999999999 99997 78887641378889988876 899999999974                68899


Q ss_pred             HHhhccCCEEEEEeeec-ccCCCC------CCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCce---e
Q 026217          138 LLNMRIQGRITLCGMIS-QYNNDK------PEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIV---Y  207 (241)
Q Consensus       138 ~~~l~~~G~~v~~g~~~-~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---~  207 (241)
                      +++++++|+++.+|... +.+...      .....+...++.+++++.+....     ..+.+.++++++.+|.++   +
T Consensus       287 ~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-----~~~~~~~~~~l~~~g~l~~~~~  361 (398)
T 1kol_A          287 MQVTRVAGKIGIPGLYVTEDPGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQTP-----VMKYNRALMQAIMWDRINIAEV  361 (398)
T ss_dssp             HHHEEEEEEEEECSCCCSCCTTCSSHHHHTTCCCCCHHHHHHTTCEEEESSCC-----HHHHHHHHHHHHHTTSCCHHHH
T ss_pred             HHHHhcCCEEEEeccccCCcccccccccccccccccHHHHhhcccEEEecccC-----hHHHHHHHHHHHHcCCCCCccc
Confidence            99999999999998642 111000      11234556678889998876432     256788899999999998   4


Q ss_pred             ccceeecCCcHHHHHHHhhcCCCcceEEEEecC
Q 026217          208 VEDKAEGLESAPAALVGLFSGRNVGKQVVEVAT  240 (241)
Q Consensus       208 ~~~~~~~l~~~~~a~~~l~~~~~~gk~vv~~~~  240 (241)
                      .++++|||+++++||+.+.+++. ||+|++++.
T Consensus       362 ~i~~~~~l~~~~~A~~~~~~~~~-gKvvi~~~~  393 (398)
T 1kol_A          362 VGVQVISLDDAPRGYGEFDAGVP-KKFVIDPHK  393 (398)
T ss_dssp             HTEEEECGGGHHHHHHHHHHTCS-CEEEECTTC
T ss_pred             eeEEEEcHHHHHHHHHHHhCCCc-eEEEEEeCC
Confidence            67899999999999999999887 999998753

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=100.00  E-value=7e-36  Score=246.57  Aligned_cols=227  Identities=19%  Similarity=0.254  Sum_probs=189.6

Q ss_pred             CccceEEeecCC--ceeeecCCCCCcch---hhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcC
Q 026217            2 TGWEEYSLVTAP--RLFKIQHTDMPLSY---YTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVG   76 (241)
Q Consensus         2 G~~ae~~~v~~~--~~~~i~P~~~~~~~---~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g   76 (241)
                      |+|+||+++|++  .++++ |++++...   .+|+++.+++|||+++ +.+++++|++|||+|+ |++|++++|+|+.+|
T Consensus       133 G~~aey~~v~~~~~~~~~i-P~~~~~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~G  209 (398)
T 2dph_A          133 GGQAEYVLVPYADYMLLKF-GDKEQAMEKIKDLTLISDILPTGFHGC-VSAGVKPGSHVYIAGA-GPVGRCAAAGARLLG  209 (398)
T ss_dssp             CSSBSEEEESSHHHHCEEC-SSHHHHHHTHHHHTTTTTHHHHHHHHH-HHTTCCTTCEEEEECC-SHHHHHHHHHHHHHT
T ss_pred             ceeeeeEEeccccCeEEEC-CCCCChhhhcchhhhhcCHHHHHHHHH-HHcCCCCCCEEEEECC-CHHHHHHHHHHHHcC
Confidence            899999999987  89999 99844331   1688999999999999 6789999999999996 999999999999999


Q ss_pred             C-EEEEEeCCHHHHHHHHHHcCCCeeecCCCchhH-HHHHHHHCCC-CccEEEeCCCch---------------hHHHHH
Q 026217           77 C-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDL-DAALKRYFPE-GINIYFENVGGK---------------MLDAVL  138 (241)
Q Consensus        77 ~-~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~-~~~i~~~~~~-~~d~v~d~~g~~---------------~~~~~~  138 (241)
                      + +|++++++++++++++ ++|++ ++|+++. ++ .+.+++.+++ ++|+||||+|+.               .+..++
T Consensus       210 a~~Vi~~~~~~~~~~~a~-~lGa~-~i~~~~~-~~~~~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~  286 (398)
T 2dph_A          210 AACVIVGDQNPERLKLLS-DAGFE-TIDLRNS-APLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLF  286 (398)
T ss_dssp             CSEEEEEESCHHHHHHHH-TTTCE-EEETTSS-SCHHHHHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHH
T ss_pred             CCEEEEEcCCHHHHHHHH-HcCCc-EEcCCCc-chHHHHHHHHhCCCCCCEEEECCCCccccccccccccccHHHHHHHH
Confidence            9 9999999999999999 99996 8888876 65 8888888877 899999999974               588999


Q ss_pred             HhhccCCEEEEEeeecc-cCCC------CCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCce--e--
Q 026217          139 LNMRIQGRITLCGMISQ-YNND------KPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIV--Y--  207 (241)
Q Consensus       139 ~~l~~~G~~v~~g~~~~-~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~--  207 (241)
                      ++++++|+++.+|.... .+..      ......+...++.+++++.+.....     .+.+.++++++.+|+++  +  
T Consensus       287 ~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~~~~  361 (398)
T 2dph_A          287 DVVRAGGAIGIPGIYVGSDPDPVNKDAGSGRLHLDFGKMWTKSIRIMTGMAPV-----TNYNRHLTEAILWDQMPYLSKV  361 (398)
T ss_dssp             HHEEEEEEEECCSCCCSCCSSCSSHHHHTTEEEEEHHHHHHTTCEEECSSCCG-----GGTHHHHHHHHHTTCCHHHHHH
T ss_pred             HHHhcCCEEEEeccccccccccccccccCCcccccHHHHhhcCCEEEEeccCc-----HHHHHHHHHHHHcCCCCccchh
Confidence            99999999999987421 0000      0112345566788999998865433     45688899999999998  6  


Q ss_pred             ccceeecCCcHHHHHHHhhcCCCcceEEEEecC
Q 026217          208 VEDKAEGLESAPAALVGLFSGRNVGKQVVEVAT  240 (241)
Q Consensus       208 ~~~~~~~l~~~~~a~~~l~~~~~~gk~vv~~~~  240 (241)
                      .++++|||+++++||+.+.+++. ||+|++++.
T Consensus       362 ~i~~~~~l~~~~~A~~~~~~~~~-gKvvv~~~~  393 (398)
T 2dph_A          362 MNIEVITLDQAPDGYAKFDKGSP-AKFVIDPHG  393 (398)
T ss_dssp             HCEEEECSTTHHHHHHHHHTTCS-CEEEECTTS
T ss_pred             hEEEEEcHHHHHHHHHHHhcCCc-eEEEEecCc
Confidence            67899999999999999999887 999998753

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=100.00  E-value=3.7e-36  Score=244.89  Aligned_cols=215  Identities=13%  Similarity=0.103  Sum_probs=187.1

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCC------cEEEEEcCCchHHHHH-HHHH-H
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQG------EYVFVSAASGAVGQLV-GQFA-K   73 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~------~~vlI~ga~g~~G~~a-vqla-~   73 (241)
                      |+|+||+++|++.++++ |+++  + ++|+++.+++|||+++ +.+++++|      ++|||+|| |++|+++ +|+| +
T Consensus       122 G~~aey~~v~~~~~~~i-P~~~--~-~~aal~~~~~ta~~al-~~~~~~~g~~~~~~~~VlV~Ga-G~vG~~a~iqla~k  195 (357)
T 2b5w_A          122 GYMSEFFTSPEKYLVRI-PRSQ--A-ELGFLIEPISITEKAL-EHAYASRSAFDWDPSSAFVLGN-GSLGLLTLAMLKVD  195 (357)
T ss_dssp             CSCBSEEEEEGGGEEEC-CGGG--S-TTGGGHHHHHHHHHHH-HHHHHTTTTSCCCCCEEEEECC-SHHHHHHHHHHHHC
T ss_pred             cceeeEEEEchHHeEEC-CCCc--c-hhhhhhchHHHHHHHH-HhcCCCCCcccCCCCEEEEECC-CHHHHHHHHHHHHH
Confidence            89999999999999999 9994  4 5678999999999999 66889999      99999998 9999999 9999 9


Q ss_pred             HcCCE-EEEEeCCHH---HHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCch-hHHHHHHhhccCCEEE
Q 026217           74 LVGCY-VVGSAGSKD---KVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGK-MLDAVLLNMRIQGRIT  148 (241)
Q Consensus        74 ~~g~~-v~~~~~~~~---~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v  148 (241)
                      .+|++ |++++++++   +.++++ ++|++++ |+++. ++.+ +++. ++++|+||||+|+. .+..++++++++|+++
T Consensus       196 ~~Ga~~Vi~~~~~~~~~~~~~~~~-~lGa~~v-~~~~~-~~~~-i~~~-~gg~Dvvid~~g~~~~~~~~~~~l~~~G~iv  270 (357)
T 2b5w_A          196 DKGYENLYCLGRRDRPDPTIDIIE-ELDATYV-DSRQT-PVED-VPDV-YEQMDFIYEATGFPKHAIQSVQALAPNGVGA  270 (357)
T ss_dssp             TTCCCEEEEEECCCSSCHHHHHHH-HTTCEEE-ETTTS-CGGG-HHHH-SCCEEEEEECSCCHHHHHHHHHHEEEEEEEE
T ss_pred             HcCCcEEEEEeCCcccHHHHHHHH-HcCCccc-CCCcc-CHHH-HHHh-CCCCCEEEECCCChHHHHHHHHHHhcCCEEE
Confidence            99996 999999888   999999 9999988 98876 7777 7777 55899999999974 7899999999999999


Q ss_pred             EEeeecccCCCCCCCccChHHH----hhcceEEEEeecccccchhHHHHHHHHHHHHcC--C-ceeccceeecCCcHHHH
Q 026217          149 LCGMISQYNNDKPEGVHNLTCL----ISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEG--K-IVYVEDKAEGLESAPAA  221 (241)
Q Consensus       149 ~~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~-~~~~~~~~~~l~~~~~a  221 (241)
                      .+|....     .....+...+    +.+++++.++....     .+.++++++++.+|  . +++.++++|||+++++|
T Consensus       271 ~~g~~~~-----~~~~~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~~~~~~~~i~~~~~l~~~~~A  340 (357)
T 2b5w_A          271 LLGVPSD-----WAFEVDAGAFHREMVLHNKALVGSVNSH-----VEHFEAATVTFTKLPKWFLEDLVTGVHPLSEFEAA  340 (357)
T ss_dssp             ECCCCCC-----CCCCCCHHHHHHHHHHTTCEEEECCCCC-----HHHHHHHHHHHHHSCHHHHHHHEEEEEEGGGGGGG
T ss_pred             EEeCCCC-----CCceecHHHHhHHHHhCCeEEEEeccCC-----HHHHHHHHHHHHhCchhhhhhhcceeecHHHHHHH
Confidence            9987431     1123455566    78999999987654     67899999999999  8 68888899999999999


Q ss_pred             HHHhhcCCCcceEEEEecC
Q 026217          222 LVGLFSGRNVGKQVVEVAT  240 (241)
Q Consensus       222 ~~~l~~~~~~gk~vv~~~~  240 (241)
                      ++.+   +..||+|+++++
T Consensus       341 ~~~~---~~~gKvvi~~~~  356 (357)
T 2b5w_A          341 FDDD---DTTIKTAIEFST  356 (357)
T ss_dssp             GCCS---TTCCEEEEECCC
T ss_pred             HHHh---CCCceEEEEecC
Confidence            9988   346899999864

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=100.00  E-value=7.6e-36  Score=239.24  Aligned_cols=213  Identities=16%  Similarity=0.199  Sum_probs=167.8

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEE
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVV   80 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~   80 (241)
                      .|+|+||+++|++.++++ |+++++. ++|+++++++|||+++ +.+++++|++|||+|| |++|++++|+|+.+|++|+
T Consensus        95 ~G~~aey~~v~~~~~~~i-P~~~~~~-~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi  170 (315)
T 3goh_A           95 HGSFAEFTVLNTDRVMTL-PDNLSFE-RAAALPCPLLTAWQAF-EKIPLTKQREVLIVGF-GAVNNLLTQMLNNAGYVVD  170 (315)
T ss_dssp             CCSSBSEEEEETTSEEEC-CTTSCHH-HHHTSHHHHHHHHHHH-TTSCCCSCCEEEEECC-SHHHHHHHHHHHHHTCEEE
T ss_pred             CcccccEEEEcHHHhccC-cCCCCHH-HHhhCccHHHHHHHHH-hhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEE
Confidence            489999999999999999 9995544 3778999999999999 7889999999999999 9999999999999999999


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCCC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDK  160 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~  160 (241)
                      +++ ++++.++++ ++|++++++     + .+++    ++++|++|||+|++....++++++++|+++.+|....     
T Consensus       171 ~~~-~~~~~~~~~-~lGa~~v~~-----d-~~~v----~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~-----  233 (315)
T 3goh_A          171 LVS-ASLSQALAA-KRGVRHLYR-----E-PSQV----TQKYFAIFDAVNSQNAAALVPSLKANGHIICIQDRIP-----  233 (315)
T ss_dssp             EEC-SSCCHHHHH-HHTEEEEES-----S-GGGC----CSCEEEEECC-------TTGGGEEEEEEEEEECCC-------
T ss_pred             EEE-ChhhHHHHH-HcCCCEEEc-----C-HHHh----CCCccEEEECCCchhHHHHHHHhcCCCEEEEEeCCCC-----
Confidence            999 899999999 999998884     2 1222    4489999999998877889999999999999975321     


Q ss_pred             CCCccChHHHhhcceEEEEeecccc-----cc---hhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcc
Q 026217          161 PEGVHNLTCLISKRIRMEGFLVPDY-----FH---LYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVG  232 (241)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~g  232 (241)
                          ......+.+.+.+....+...     +.   ...+.++.+++++.+|++++.++++|||+++++|++.+.  +..|
T Consensus       234 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~--~~~g  307 (315)
T 3goh_A          234 ----APIDPAFTRTISYHEIALGALHDFGDRQDWQILMQQGEALLTLIAQGKMEIAAPDIFRFEQMIEALDHSE--QTKL  307 (315)
T ss_dssp             ------------CCSEEEEECGGGHHHHCCHHHHHHHHHHHHHHHHHHHTTSSCCCCCEEEEGGGHHHHHHHHH--HHCC
T ss_pred             ----ccccchhhhcceeeEEEeecccccCChhHHHHHHHHHHHHHHHHHCCCcccccceEecHHHHHHHHHHHH--hcCC
Confidence                111123445555555554332     11   334578899999999999999999999999999999998  6678


Q ss_pred             eEEEEecC
Q 026217          233 KQVVEVAT  240 (241)
Q Consensus       233 k~vv~~~~  240 (241)
                      |+|+++++
T Consensus       308 Kvvi~~~~  315 (315)
T 3goh_A          308 KTVLTLNE  315 (315)
T ss_dssp             CEEEESCC
T ss_pred             cEEEEecC
Confidence            99999864

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=100.00  E-value=1.1e-34  Score=236.96  Aligned_cols=217  Identities=18%  Similarity=0.183  Sum_probs=186.6

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCC-CCcEEEEEcCCchHHHHHHHHHHHcCCEEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPK-QGEYVFVSAASGAVGQLVGQFAKLVGCYVV   80 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~-~~~~vlI~ga~g~~G~~avqla~~~g~~v~   80 (241)
                      |+|+||+++|++.++++ |++++.. ++|++++++.|||+++.+ .+++ +|++|||+|+ |++|++++|+|+.+|++|+
T Consensus       140 G~~aey~~v~~~~~~~~-P~~ls~~-~aa~l~~~~~ta~~al~~-~~~~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi  215 (366)
T 1yqd_A          140 GGYSNHMVANERYIIRF-PDNMPLD-GGAPLLCAGITVYSPLKY-FGLDEPGKHIGIVGL-GGLGHVAVKFAKAFGSKVT  215 (366)
T ss_dssp             CSSBSEEEEEGGGCEEC-CTTSCTT-TTGGGGTHHHHHHHHHHH-TTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEE
T ss_pred             CccccEEEEchhhEEEC-CCCCCHH-HhhhhhhhHHHHHHHHHh-cCcCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEE
Confidence            89999999999999999 9995555 478899999999999965 5788 9999999996 9999999999999999999


Q ss_pred             EEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCch-hHHHHHHhhccCCEEEEEeeecccCCC
Q 026217           81 GSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGK-MLDAVLLNMRIQGRITLCGMISQYNND  159 (241)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~  159 (241)
                      ++++++++.+.+++++|+++++|+++. +   .+++.++ ++|+|||++|+. .+..++++++++|+++.+|....    
T Consensus       216 ~~~~~~~~~~~~~~~lGa~~v~~~~~~-~---~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~----  286 (366)
T 1yqd_A          216 VISTSPSKKEEALKNFGADSFLVSRDQ-E---QMQAAAG-TLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEK----  286 (366)
T ss_dssp             EEESCGGGHHHHHHTSCCSEEEETTCH-H---HHHHTTT-CEEEEEECCSSCCCSHHHHHHEEEEEEEEECCCCSS----
T ss_pred             EEeCCHHHHHHHHHhcCCceEEeccCH-H---HHHHhhC-CCCEEEECCCcHHHHHHHHHHHhcCCEEEEEccCCC----
Confidence            999999998887768999999988764 3   4455543 799999999974 78999999999999999987431    


Q ss_pred             CCCCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcceEEEEec
Q 026217          160 KPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVA  239 (241)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk~vv~~~  239 (241)
                        ....+...++.+++++.++....     .+.+.++++++.+|.+++.+ ++|||+++++||+.+++++..||+|++++
T Consensus       287 --~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvl~~~  358 (366)
T 1yqd_A          287 --PLELPAFSLIAGRKIVAGSGIGG-----MKETQEMIDFAAKHNITADI-EVISTDYLNTAMERLAKNDVRYRFVIDVG  358 (366)
T ss_dssp             --CEEECHHHHHTTTCEEEECCSCC-----HHHHHHHHHHHHHTTCCCCE-EEECGGGHHHHHHHHHTTCCSSEEEECHH
T ss_pred             --CCCcCHHHHHhCCcEEEEecCCC-----HHHHHHHHHHHHcCCCCCce-EEEcHHHHHHHHHHHHcCCcceEEEEEcc
Confidence              12355667888999999987654     56788999999999999877 69999999999999999988899999875

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=100.00  E-value=2.3e-35  Score=241.85  Aligned_cols=226  Identities=16%  Similarity=0.165  Sum_probs=187.9

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEc-CCchHHHHHHHHHHHcCCEE
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSA-ASGAVGQLVGQFAKLVGCYV   79 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~g-a~g~~G~~avqla~~~g~~v   79 (241)
                      .|+|+||+++|++.++++ |++++.. ++|++++.++|||+++.. .. ++|++|||+| |+|++|++++|+|+.+|++|
T Consensus       124 ~G~~aey~~v~~~~~~~i-P~~~~~~-~aa~l~~~~~ta~~~~~~-~~-~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~V  199 (379)
T 3iup_A          124 GAMYSQYRCIPADQCLVL-PEGATPA-DGASSFVNPLTALGMVET-MR-LEGHSALVHTAAASNLGQMLNQICLKDGIKL  199 (379)
T ss_dssp             SCCSBSEEEEEGGGEEEC-CTTCCHH-HHTTSSHHHHHHHHHHHH-HH-HTTCSCEEESSTTSHHHHHHHHHHHHHTCCE
T ss_pred             CCcceeEEEeCHHHeEEC-CCCCCHH-HHHhhhhhHHHHHHHHHH-hc-cCCCEEEEECCCCCHHHHHHHHHHHHCCCEE
Confidence            389999999999999999 9995555 488899999999988755 45 8999999996 78999999999999999999


Q ss_pred             EEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCc-hhHHHHHHhhc-----cC--------
Q 026217           80 VGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGG-KMLDAVLLNMR-----IQ--------  144 (241)
Q Consensus        80 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~-----~~--------  144 (241)
                      +++++++++.++++ ++|+++++|+++. ++.+.+++.+++ ++|+||||+|+ .....++++++     ++        
T Consensus       200 i~~~~~~~~~~~~~-~lGa~~~~~~~~~-~~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~~l~~~~~r~~G~~~~~G~  277 (379)
T 3iup_A          200 VNIVRKQEQADLLK-AQGAVHVCNAASP-TFMQDLTEALVSTGATIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGS  277 (379)
T ss_dssp             EEEESSHHHHHHHH-HTTCSCEEETTST-THHHHHHHHHHHHCCCEEEESCEEESHHHHHHHHHHHHHHTTCCSCCTTCC
T ss_pred             EEEECCHHHHHHHH-hCCCcEEEeCCCh-HHHHHHHHHhcCCCceEEEECCCchhhHHHHHHhcchhhhccccceeeccc
Confidence            99999999999999 9999999999987 999999998877 99999999997 46677888775     34        


Q ss_pred             ---CEEEEEeeecccCCCCCCCccChHHHhhcceEEEEeecccc-----cchhHHHHHHHHHHHHcCCceeccceeecCC
Q 026217          145 ---GRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY-----FHLYPKFLEMMIPRIKEGKIVYVEDKAEGLE  216 (241)
Q Consensus       145 ---G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~  216 (241)
                         |+++.+|.....       +.+....+.+++++.|+.+..+     ++...+.++.+.+++.+ .+++.++++|||+
T Consensus       278 ~~~g~iv~~G~~~~~-------~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~i~~~~~l~  349 (379)
T 3iup_A          278 TTHKQVYLYGGLDTS-------PTEFNRNFGMAWGMGGWLLFPFLQKIGRERANALKQRVVAELKT-TFASHYSKEISLA  349 (379)
T ss_dssp             CSCEEEEECCCSEEE-------EEEECCCSCSCEEEEECCHHHHHHHHCHHHHHHHHHHHHHTTTT-TTCCCCSEEEEHH
T ss_pred             ccCceEEEecCCCCC-------ccccccccccceEEEEEEeeeecccCCHHHHHHHHHHHHHHHhc-cCCCcceEEecHH
Confidence               566655543211       1222345678899999877554     33445667778888877 5899999999999


Q ss_pred             cH--HHHHHHhhcCCCcceEEEEecC
Q 026217          217 SA--PAALVGLFSGRNVGKQVVEVAT  240 (241)
Q Consensus       217 ~~--~~a~~~l~~~~~~gk~vv~~~~  240 (241)
                      ++  ++|++.+.+++..||+|++++.
T Consensus       350 ~~~~~~A~~~l~~~~~~gKvVv~~~~  375 (379)
T 3iup_A          350 EVLDLDMIAVYNKRATGEKYLINPNK  375 (379)
T ss_dssp             HHTCHHHHHHHTTCCTTCCEEEETTT
T ss_pred             HhhhHHHHHHHhcCCCCceEEEeCCC
Confidence            99  9999999999999999999864

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=100.00  E-value=8.2e-34  Score=232.52  Aligned_cols=227  Identities=21%  Similarity=0.253  Sum_probs=181.0

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcC----CCCCcEEEEEcCCchHHHHHHHHHHHcC
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCS----PKQGEYVFVSAASGAVGQLVGQFAKLVG   76 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~----~~~~~~vlI~ga~g~~G~~avqla~~~g   76 (241)
                      .|+||||+++|++.++++ |+++++. ++|+++.+++|||+++.+.++    +++|++|+|+||+|++|++++|+|+..|
T Consensus       131 ~G~~aey~~v~~~~~~~i-P~~ls~~-~Aa~l~~~~~tA~~al~~~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~G  208 (375)
T 2vn8_A          131 QGTLSEFVVVSGNEVSHK-PKSLTHT-QAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWD  208 (375)
T ss_dssp             CCSSBSEEEEEGGGEEEC-CTTSCHH-HHTTSHHHHHHHHHHHTTTTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHHTT
T ss_pred             CccceeEEEEcHHHeeeC-CCCCCHH-HHhhhHHHHHHHHHHHHHhcccccccCCCCEEEEECCCCHHHHHHHHHHHhCC
Confidence            489999999999999999 9995554 478888899999999977788    9999999999999999999999999999


Q ss_pred             CEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCch--hHHHHHHhhccCCEEEEEeeec
Q 026217           77 CYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGK--MLDAVLLNMRIQGRITLCGMIS  154 (241)
Q Consensus        77 ~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~--~~~~~~~~l~~~G~~v~~g~~~  154 (241)
                      ++|++++ ++++.++++ ++|++.++|+++. ++.+++++.  +++|++|||+|+.  .+..++++++++|+++.+|...
T Consensus       209 a~Vi~~~-~~~~~~~~~-~lGa~~v~~~~~~-~~~~~~~~~--~g~D~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~  283 (375)
T 2vn8_A          209 AHVTAVC-SQDASELVR-KLGADDVIDYKSG-SVEEQLKSL--KPFDFILDNVGGSTETWAPDFLKKWSGATYVTLVTPF  283 (375)
T ss_dssp             CEEEEEE-CGGGHHHHH-HTTCSEEEETTSS-CHHHHHHTS--CCBSEEEESSCTTHHHHGGGGBCSSSCCEEEESCCSH
T ss_pred             CEEEEEe-ChHHHHHHH-HcCCCEEEECCch-HHHHHHhhc--CCCCEEEECCCChhhhhHHHHHhhcCCcEEEEeCCCc
Confidence            9999998 678899998 9999999999887 787777653  3799999999976  4478889999999999998633


Q ss_pred             ccCCCCCCCccC----hHHHhh-------cceEEEEeecccccchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHH
Q 026217          155 QYNNDKPEGVHN----LTCLIS-------KRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALV  223 (241)
Q Consensus       155 ~~~~~~~~~~~~----~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~  223 (241)
                      ..+.........    ...++.       ++..+.+...    ....+.++++++++.+|++++.++++|||+++++|++
T Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~  359 (375)
T 2vn8_A          284 LLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFF----MASGPCLDDIAELVDAGKIRPVIEQTFPFSKVPEAFL  359 (375)
T ss_dssp             HHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCEEEECCC----CCCHHHHHHHHHHHHTTSCCCCEEEEEEGGGHHHHHH
T ss_pred             ccccccccccchhheeehhhccccccccccCcceEEEEe----CCCHHHHHHHHHHHHCCCcccCcCeEECHHHHHHHHH
Confidence            210000000000    011222       3333333221    1226778999999999999999999999999999999


Q ss_pred             HhhcCCCcceEEEEe
Q 026217          224 GLFSGRNVGKQVVEV  238 (241)
Q Consensus       224 ~l~~~~~~gk~vv~~  238 (241)
                      .+.+++..||+|+++
T Consensus       360 ~~~~~~~~gKvvi~~  374 (375)
T 2vn8_A          360 KVERGHARGKTVINV  374 (375)
T ss_dssp             HHHHCCCSSEEEEEC
T ss_pred             HHHcCCCCCeEEEEe
Confidence            999988889999975

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=100.00  E-value=3.8e-34  Score=233.77  Aligned_cols=217  Identities=13%  Similarity=0.069  Sum_probs=182.5

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHH--H--hcCCC--C-------CcEEEEEcCCchHHHH
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFF--E--VCSPK--Q-------GEYVFVSAASGAVGQL   67 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~--~--~~~~~--~-------~~~vlI~ga~g~~G~~   67 (241)
                      .|+|+||+++|++.++++ |++++   +.|+++.+++|||+++.  +  .++++  +       |++|+|+|| |++|++
T Consensus       121 ~G~~aey~~v~~~~~~~i-P~~l~---~~Aal~~~~~ta~~al~~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga-G~vG~~  195 (366)
T 2cdc_A          121 DGFMREWWYDDPKYLVKI-PKSIE---DIGILAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGT-GPIGVL  195 (366)
T ss_dssp             CCSCBSEEEECGGGEEEE-CGGGT---TTGGGHHHHHHHHHHHHHHHHHGGGSSCCSCTTSSSTTCEEEEESC-HHHHHH
T ss_pred             CCceeEEEEechHHeEEC-cCCcc---hhhhhcCcHHHHHHHHHhhhhcccCccccccccccCCCCEEEEECC-CHHHHH
Confidence            389999999999999999 99954   45678899999999997  3  67888  8       999999998 999999


Q ss_pred             HHHHHHHcCCEEEEEeCCH---HHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCc-hhH-HHHHHhhc
Q 026217           68 VGQFAKLVGCYVVGSAGSK---DKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG-KML-DAVLLNMR  142 (241)
Q Consensus        68 avqla~~~g~~v~~~~~~~---~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~-~~~~~~l~  142 (241)
                      ++|+++..|++|+++++++   ++.++++ ++|++.+ | ++  ++.+.+++ +++++|++||++|. ..+ ..++++++
T Consensus       196 ~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~-~~ga~~v-~-~~--~~~~~~~~-~~~~~d~vid~~g~~~~~~~~~~~~l~  269 (366)
T 2cdc_A          196 FTLLFRTYGLEVWMANRREPTEVEQTVIE-ETKTNYY-N-SS--NGYDKLKD-SVGKFDVIIDATGADVNILGNVIPLLG  269 (366)
T ss_dssp             HHHHHHHHTCEEEEEESSCCCHHHHHHHH-HHTCEEE-E-CT--TCSHHHHH-HHCCEEEEEECCCCCTHHHHHHGGGEE
T ss_pred             HHHHHHhCCCEEEEEeCCccchHHHHHHH-HhCCcee-c-hH--HHHHHHHH-hCCCCCEEEECCCChHHHHHHHHHHHh
Confidence            9999999999999999988   8899998 9999887 7 43  45556665 33589999999997 477 89999999


Q ss_pred             cCCEEEEEeeecccCCCCCCCccChHH---HhhcceEEEEeecccccchhHHHHHHHHHHHHcCC------ceeccceee
Q 026217          143 IQGRITLCGMISQYNNDKPEGVHNLTC---LISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGK------IVYVEDKAE  213 (241)
Q Consensus       143 ~~G~~v~~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~------~~~~~~~~~  213 (241)
                      ++|+++.+|....     .....+...   ++.+++++.|+....     .+.++++++++.+|.      +++.++++|
T Consensus       270 ~~G~iv~~g~~~~-----~~~~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~i~~~~~~~~~i~~~~  339 (366)
T 2cdc_A          270 RNGVLGLFGFSTS-----GSVPLDYKTLQEIVHTNKTIIGLVNGQ-----KPHFQQAVVHLASWKTLYPKAAKMLITKTV  339 (366)
T ss_dssp             EEEEEEECSCCCS-----CEEEEEHHHHHHHHHTTCEEEECCCCC-----HHHHHHHHHHHHHHHHHSHHHHTTSEEEEE
T ss_pred             cCCEEEEEecCCC-----CccccChhhhHHHHhcCcEEEEecCCC-----HHHHHHHHHHHHcCCCCcccchhhcEEEEE
Confidence            9999999987432     112344555   788999999987654     678899999999998      567788999


Q ss_pred             cCCcHHHHHHH--hhcCCCcceEEEEec
Q 026217          214 GLESAPAALVG--LFSGRNVGKQVVEVA  239 (241)
Q Consensus       214 ~l~~~~~a~~~--l~~~~~~gk~vv~~~  239 (241)
                      ||+++++||+.  ++ ++..||+|++++
T Consensus       340 ~l~~~~~A~~~l~~~-~~~~gKvvi~~~  366 (366)
T 2cdc_A          340 SINDEKELLKVLREK-EHGEIKIRILWE  366 (366)
T ss_dssp             ETTCHHHHHHHHHCC-CTTCCEEEEECC
T ss_pred             cHHHHHHHHHHHhhh-cCCceEEEEecC
Confidence            99999999999  55 566899999864

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=100.00  E-value=1.5e-32  Score=264.80  Aligned_cols=231  Identities=19%  Similarity=0.261  Sum_probs=198.6

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEE
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVG   81 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~   81 (241)
                      |+|+||+++|++.++++ |++++.. ++|+++++++|||+++.+.+++++|++|||+||+|++|++++|+|+..|++|++
T Consensus      1620 G~~Aeyv~vp~~~v~~i-Pd~ls~~-eAA~lp~~~~TA~~al~~~a~l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Via 1697 (2512)
T 2vz8_A         1620 EGLATSVLLLQHATWEV-PSTWTLE-EAASVPIVYTTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGCRVFT 1697 (2512)
T ss_dssp             CCSBSEEECCGGGEEEC-CTTSCHH-HHTTSHHHHHHHHHHHTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEE
T ss_pred             CceeeEEEcccceEEEe-CCCCCHH-HHHHhHHHHHHHHHHHHHHhcCCCCCEEEEEeCChHHHHHHHHHHHHcCCEEEE
Confidence            89999999999999999 9995544 488899999999999988889999999999999999999999999999999999


Q ss_pred             EeCCHHHHHHHHHH---cCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccC
Q 026217           82 SAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYN  157 (241)
Q Consensus        82 ~~~~~~~~~~~~~~---~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~  157 (241)
                      +++++++.+++++.   +|+++++++++. ++.+.+++.+++ ++|+||||++++.+..++++++++|+++.+|......
T Consensus      1698 t~~s~~k~~~l~~~~~~lga~~v~~~~~~-~~~~~i~~~t~g~GvDvVld~~g~~~l~~~l~~L~~~Gr~V~iG~~~~~~ 1776 (2512)
T 2vz8_A         1698 TVGSAEKRAYLQARFPQLDETCFANSRDT-SFEQHVLRHTAGKGVDLVLNSLAEEKLQASVRCLAQHGRFLEIGKFDLSN 1776 (2512)
T ss_dssp             EESCHHHHHHHHHHCTTCCSTTEEESSSS-HHHHHHHHTTTSCCEEEEEECCCHHHHHHHHTTEEEEEEEEECCCHHHHT
T ss_pred             EeCChhhhHHHHhhcCCCCceEEecCCCH-HHHHHHHHhcCCCCceEEEECCCchHHHHHHHhcCCCcEEEEeecccccc
Confidence            99999999999943   678899999987 899999998887 9999999999889999999999999999998643211


Q ss_pred             CCCCCCccChHHHhhcceEEEEeecccc----cchhHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCCCcce
Q 026217          158 NDKPEGVHNLTCLISKRIRMEGFLVPDY----FHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGK  233 (241)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~~~gk  233 (241)
                           ........+.+++++.++....+    +....+.+..+.+++.+|.+++.+.++||++++++|++.+.+++..||
T Consensus      1777 -----~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~l~~l~~~~~~g~l~p~i~~~f~l~ei~eA~~~l~~g~~~GK 1851 (2512)
T 2vz8_A         1777 -----NHALGMAVFLKNVTFHGILLDSLFEEGGATWQEVSELLKAGIQEGVVQPLKCTVFPRTKVEAAFRYMAQGKHIGK 1851 (2512)
T ss_dssp             -----TCEEEGGGGGGCCEEEECCGGGTTSSCCHHHHHHHHHHHHHHTTTCSCCCCEEEEESSTHHHHHHHHHTTCCSSE
T ss_pred             -----cCcccccccccCCcEEEeeHHHHhhhCHHHHHHHHHHHHHHHHcCCcCCCcceEecHHHHHHHHHhhhccCccce
Confidence                 11223456788999999876543    234455666666777789999999999999999999999999998999


Q ss_pred             EEEEecC
Q 026217          234 QVVEVAT  240 (241)
Q Consensus       234 ~vv~~~~  240 (241)
                      +|+++++
T Consensus      1852 vVi~~~~ 1858 (2512)
T 2vz8_A         1852 VVIQVRE 1858 (2512)
T ss_dssp             EEEECSC
T ss_pred             EEEECCC
Confidence            9998853

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=99.95  E-value=2.4e-27  Score=177.58  Aligned_cols=191  Identities=19%  Similarity=0.311  Sum_probs=145.3

Q ss_pred             CceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Q 026217           13 PRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLL   92 (241)
Q Consensus        13 ~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~   92 (241)
                      +.++++ |+++++. ++|+++++++|||+++.+.+++++|++|+|+||+|++|++++|+++..|++|+++++++++.+.+
T Consensus         2 ~~~~~~-P~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~   79 (198)
T 1pqw_A            2 DLVVPI-PDTLADN-EAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML   79 (198)
T ss_dssp             -------------C-HHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH
T ss_pred             CceeEC-CCCCCHH-HHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            568899 9995555 47888899999999998778999999999999999999999999999999999999999999889


Q ss_pred             HHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCCCCCCccChHHHh
Q 026217           93 KNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLI  171 (241)
Q Consensus        93 ~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  171 (241)
                      + ++|++.++|+.+. ++.+.+.+.+.+ ++|+++|++|...+..++++++++|+++.+|.....+    ....+. ..+
T Consensus        80 ~-~~g~~~~~d~~~~-~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~----~~~~~~-~~~  152 (198)
T 1pqw_A           80 S-RLGVEYVGDSRSV-DFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDVYA----DASLGL-AAL  152 (198)
T ss_dssp             H-TTCCSEEEETTCS-THHHHHHHHTTTCCEEEEEECCCTHHHHHHHHTEEEEEEEEECSCGGGTT----TCEEEG-GGG
T ss_pred             H-HcCCCEEeeCCcH-HHHHHHHHHhCCCCCeEEEECCchHHHHHHHHHhccCCEEEEEcCCCCcC----cCcCCh-hHh
Confidence            8 8999888888876 788888887765 8999999999888999999999999999998754210    111222 245


Q ss_pred             hcceEEEEeeccc----ccchhHHHHHHHHHHHHcCCceecccee
Q 026217          172 SKRIRMEGFLVPD----YFHLYPKFLEMMIPRIKEGKIVYVEDKA  212 (241)
Q Consensus       172 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~g~~~~~~~~~  212 (241)
                      .+++++.++....    .+....+.++++++++.+|++++.+.++
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~  197 (198)
T 1pqw_A          153 AKSASFSVVDLDLNLKLQPARYRQLLQHILQHVADGKLEVLPVTA  197 (198)
T ss_dssp             TTTCEEEECCHHHHHHHCHHHHHHHHHHHHHHHHTTSSCCCCCC-
T ss_pred             cCCcEEEEEehHHhhccCHHHHHHHHHHHHHHHHcCCccCCCCCc
Confidence            6888888764411    1122357889999999999999876554

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=99.20  E-value=1.6e-10  Score=93.64  Aligned_cols=145  Identities=12%  Similarity=0.023  Sum_probs=99.8

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe--eecCCCchhHHHHHHHHCCCCccEEEeCC
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFPEGINIYFENV  129 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~--~i~~~~~~~~~~~i~~~~~~~~d~v~d~~  129 (241)
                      +++|+|+|+ |++|+++++.++.+|++|+++++++++.+.++ +.+...  +++.+.. ++.+.+.     ++|+|++|+
T Consensus       167 ~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~-~~~~~~~~~~~~~~~-~~~~~~~-----~~DvVI~~~  238 (361)
T 1pjc_A          167 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLE-TLFGSRVELLYSNSA-EIETAVA-----EADLLIGAV  238 (361)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHGGGSEEEECCHH-HHHHHHH-----TCSEEEECC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH-HhhCceeEeeeCCHH-HHHHHHc-----CCCEEEECC
Confidence            489999997 99999999999999999999999999999998 665543  3433333 4555553     599999999


Q ss_pred             Cchh-------HHHHHHhhccCCEEEEEeeecccCCCCC-CCccChHHHhhcceEEEEeecccc--c----chh-HHHHH
Q 026217          130 GGKM-------LDAVLLNMRIQGRITLCGMISQYNNDKP-EGVHNLTCLISKRIRMEGFLVPDY--F----HLY-PKFLE  194 (241)
Q Consensus       130 g~~~-------~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~-~~~~~  194 (241)
                      +...       ....++.++++|+++.++...+.+++.. ..+.+...+..+++++.+......  +    ..+ +..+.
T Consensus       239 ~~~~~~~~~li~~~~~~~~~~g~~ivdv~~~~gg~~e~~~~~~~~~~~~~~~~v~~~~~~~lp~~~~~~~s~~~~~~~~~  318 (361)
T 1pjc_A          239 LVPGRRAPILVPASLVEQMRTGSVIVDVAVDQGGCVETLHPTSHTQPTYEVFGVVHYGVPNMPGAVPWTATQALNNSTLP  318 (361)
T ss_dssp             CCTTSSCCCCBCHHHHTTSCTTCEEEETTCTTCCSBTTCCCCCSSSCEEEETTEEEECCSCGGGGCHHHHHHHHHHHHHH
T ss_pred             CcCCCCCCeecCHHHHhhCCCCCEEEEEecCCCCCCccccCCCCCCCEEEECCEEEEEeCCcchhhHHHHHHHHHHHHHH
Confidence            8532       5678889999999999987543221110 112333344567777776543211  1    111 34567


Q ss_pred             HHHHHHHcCC
Q 026217          195 MMIPRIKEGK  204 (241)
Q Consensus       195 ~~~~~~~~g~  204 (241)
                      .+++++.+|.
T Consensus       319 ~l~~l~~~G~  328 (361)
T 1pjc_A          319 YVVKLANQGL  328 (361)
T ss_dssp             HHHHHHHHGG
T ss_pred             HHHHHHhCCc
Confidence            7888888773

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=99.09  E-value=1.8e-09  Score=88.05  Aligned_cols=98  Identities=18%  Similarity=0.146  Sum_probs=77.0

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      ++++|+|+|+ |++|+.+++.++.+|++|+++++++++.+.+++.+|.....+.....++.+.+.     ++|+|++|++
T Consensus       167 ~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~-----~aDvVi~~~~  240 (377)
T 2vhw_A          167 EPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVK-----RADLVIGAVL  240 (377)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHH-----HCSEEEECCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHc-----CCCEEEECCC
Confidence            5789999997 999999999999999999999999999988884478753233222214444443     4999999997


Q ss_pred             chh-------HHHHHHhhccCCEEEEEeeec
Q 026217          131 GKM-------LDAVLLNMRIQGRITLCGMIS  154 (241)
Q Consensus       131 ~~~-------~~~~~~~l~~~G~~v~~g~~~  154 (241)
                      ...       ....++.++++|.++.++...
T Consensus       241 ~p~~~t~~li~~~~l~~mk~g~~iV~va~~~  271 (377)
T 2vhw_A          241 VPGAKAPKLVSNSLVAHMKPGAVLVDIAIDQ  271 (377)
T ss_dssp             CTTSCCCCCBCHHHHTTSCTTCEEEEGGGGT
T ss_pred             cCCCCCcceecHHHHhcCCCCcEEEEEecCC
Confidence            432       578889999999999998644

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=99.07  E-value=3.5e-09  Score=86.11  Aligned_cols=148  Identities=14%  Similarity=0.064  Sum_probs=93.1

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      ++++|+|+|+ |++|+.+++.++.+|++|+++++++++.+.+++.+|.....+..+..++.+.+.     ++|+|++|++
T Consensus       165 ~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~-----~~DvVi~~~g  238 (369)
T 2eez_A          165 APASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQ-----HADLLIGAVL  238 (369)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHH-----HCSEEEECCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHh-----CCCEEEECCC
Confidence            4589999998 999999999999999999999999999888874477653233333214444443     4999999998


Q ss_pred             chh-------HHHHHHhhccCCEEEEEeeecccCCCCC-CCccChHHHhhcceEEEEeecccc--cc-----hhHHHHHH
Q 026217          131 GKM-------LDAVLLNMRIQGRITLCGMISQYNNDKP-EGVHNLTCLISKRIRMEGFLVPDY--FH-----LYPKFLEM  195 (241)
Q Consensus       131 ~~~-------~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~-----~~~~~~~~  195 (241)
                      ...       ....++.++++|+++.++...+..++.. ..+.+...+..+++.+.+......  +.     ..++.+..
T Consensus       239 ~~~~~~~~li~~~~l~~mk~gg~iV~v~~~~gg~~d~~ep~~~~~~~~~~~~v~~~~v~~lp~~~p~~as~~~~~~~~~~  318 (369)
T 2eez_A          239 VPGAKAPKLVTRDMLSLMKEGAVIVDVAVDQGGCVETIRPTTHAEPTYVVDGVVHYGVANMPGAVPRTSTFALTNQTLPY  318 (369)
T ss_dssp             -------CCSCHHHHTTSCTTCEEEECC-------------------CEETTEEEECCSCSGGGSHHHHHHHHHHHHHHH
T ss_pred             CCccccchhHHHHHHHhhcCCCEEEEEecCCCCCCCcccCCCCCCCEEEECCEEEEeeCCcchhcHHHHHHHHHHHHHHH
Confidence            532       5788899999999999987543211110 011222233456777666543211  11     11345677


Q ss_pred             HHHHHHcCC
Q 026217          196 MIPRIKEGK  204 (241)
Q Consensus       196 ~~~~~~~g~  204 (241)
                      +++++.+|.
T Consensus       319 l~~l~~~g~  327 (369)
T 2eez_A          319 VLKLAEKGL  327 (369)
T ss_dssp             HHHHHHHTT
T ss_pred             HHHHHhcCh
Confidence            778887774

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=98.99  E-value=3.7e-10  Score=92.87  Aligned_cols=138  Identities=14%  Similarity=0.100  Sum_probs=99.3

Q ss_pred             CccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhc---CCCCCcEEEEEcCCchHHHHHHHHHHHcCC-
Q 026217            2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVC---SPKQGEYVFVSAASGAVGQLVGQFAKLVGC-   77 (241)
Q Consensus         2 G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~---~~~~~~~vlI~ga~g~~G~~avqla~~~g~-   77 (241)
                      |++++|+..+...++++ |++  ++.+.++...+..++|.++....   .-.+|++|+|+|+ |++|.++++.++..|+ 
T Consensus       117 G~~~~~~~~~~~~a~~~-~k~--v~~~~~~~~~~~s~a~~av~~a~~~~~~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~  192 (404)
T 1gpj_A          117 GTLDEALKIVFRRAINL-GKR--AREETRISEGAVSIGSAAVELAERELGSLHDKTVLVVGA-GEMGKTVAKSLVDRGVR  192 (404)
T ss_dssp             TCCCHHHHHHHHHHHHH-HHH--HHHHSSTTCSCCSHHHHHHHHHHHHHSCCTTCEEEEESC-CHHHHHHHHHHHHHCCS
T ss_pred             CCchHHHHHHHHHHhhh-hcc--CcchhhhcCCCccHHHHHHHHHHHHhccccCCEEEEECh-HHHHHHHHHHHHHCCCC
Confidence            66788888888888999 887  44444445567778888774322   1258999999997 9999999999999999 


Q ss_pred             EEEEEeCCHHHH-HHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCch-hH--HHHHHh--h--ccCCEEEE
Q 026217           78 YVVGSAGSKDKV-DLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGK-ML--DAVLLN--M--RIQGRITL  149 (241)
Q Consensus        78 ~v~~~~~~~~~~-~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~-~~--~~~~~~--l--~~~G~~v~  149 (241)
                      +|+++.+++++. +.++ ++|++ ++++.   ++.+.+.     ++|+|++|++.. .+  ...+..  +  ++++.++.
T Consensus       193 ~V~v~~r~~~ra~~la~-~~g~~-~~~~~---~l~~~l~-----~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~  262 (404)
T 1gpj_A          193 AVLVANRTYERAVELAR-DLGGE-AVRFD---ELVDHLA-----RSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILI  262 (404)
T ss_dssp             EEEEECSSHHHHHHHHH-HHTCE-ECCGG---GHHHHHH-----TCSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEE
T ss_pred             EEEEEeCCHHHHHHHHH-HcCCc-eecHH---hHHHHhc-----CCCEEEEccCCCCceecHHHHHHHHHhccCCCCEEE
Confidence            999999998886 5555 88875 44332   4444442     599999999853 22  234544  4  55777777


Q ss_pred             Eeee
Q 026217          150 CGMI  153 (241)
Q Consensus       150 ~g~~  153 (241)
                      ++..
T Consensus       263 vdia  266 (404)
T 1gpj_A          263 IDIA  266 (404)
T ss_dssp             EECC
T ss_pred             EEcc
Confidence            7763

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=98.97  E-value=1.5e-09  Score=88.69  Aligned_cols=126  Identities=13%  Similarity=0.109  Sum_probs=85.9

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCee-ecCCCc--------------hh----HH
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEA-FNYKEE--------------PD----LD  111 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~-i~~~~~--------------~~----~~  111 (241)
                      ++++|+|+|+ |.+|+.++++++.+|++|+++++++++.+.++ ++|++.+ ++..+.              .+    ..
T Consensus       171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~-~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~  248 (384)
T 1l7d_A          171 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVE-SLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQA  248 (384)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHH-HTTCEECCC-----------------------CCHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEeecccccccccccccchhhcCHHHHhhhH
Confidence            6899999996 99999999999999999999999988989898 7998654 233110              00    11


Q ss_pred             HHHHHHCCCCccEEEeCC---Cch---h-HHHHHHhhccCCEEEEEeeecccCCCCCCCccChHHHhhcceEEEEeec
Q 026217          112 AALKRYFPEGINIYFENV---GGK---M-LDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLV  182 (241)
Q Consensus       112 ~~i~~~~~~~~d~v~d~~---g~~---~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (241)
                      +.+.+... ++|+|++|+   |..   . ....++.+++++.++.++...+.....   ..+...+..+++++.+...
T Consensus       249 ~~l~~~~~-~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~~~gg~~~~---~~~~~~~~~~~v~i~g~~~  322 (384)
T 1l7d_A          249 EAVLKELV-KTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPL---SEPGKIVVKHGVKIVGHTN  322 (384)
T ss_dssp             HHHHHHHT-TCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTCSSTT---CCTTCEEEETTEEEECCSS
T ss_pred             HHHHHHhC-CCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEecCCCCCeec---ccCCcEEEECCEEEEEeCC
Confidence            12333322 599999999   532   2 367889999999999998644322211   1122234567788877654

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=98.84  E-value=2.3e-08  Score=83.62  Aligned_cols=105  Identities=17%  Similarity=0.145  Sum_probs=83.4

Q ss_pred             chhHHHHHHHHHhcC-CCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHH
Q 026217           34 MPGMTAYAGFFEVCS-PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDA  112 (241)
Q Consensus        34 ~~~~ta~~~l~~~~~-~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~  112 (241)
                      ....++|+++.+..+ ..+|++|+|+|+ |.+|+.+++.++.+|++|+++++++.+.+.++ ++|++ ++      ++.+
T Consensus       255 ~~~~s~~~g~~r~~~~~l~GktV~IiG~-G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~-~~Ga~-~~------~l~e  325 (494)
T 3ce6_A          255 GTRHSLIDGINRGTDALIGGKKVLICGY-GDVGKGCAEAMKGQGARVSVTEIDPINALQAM-MEGFD-VV------TVEE  325 (494)
T ss_dssp             HHHHHHHHHHHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCE-EC------CHHH
T ss_pred             hhhhhhhHHHHhccCCCCCcCEEEEEcc-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCE-Ee------cHHH
Confidence            345667777644332 689999999996 99999999999999999999999999988888 88885 32      2322


Q ss_pred             HHHHHCCCCccEEEeCCCch-hHH-HHHHhhccCCEEEEEee
Q 026217          113 ALKRYFPEGINIYFENVGGK-MLD-AVLLNMRIQGRITLCGM  152 (241)
Q Consensus       113 ~i~~~~~~~~d~v~d~~g~~-~~~-~~~~~l~~~G~~v~~g~  152 (241)
                      .+     .++|+|+++++.. .+. ..++.++++|+++.+|.
T Consensus       326 ~l-----~~aDvVi~atgt~~~i~~~~l~~mk~ggilvnvG~  362 (494)
T 3ce6_A          326 AI-----GDADIVVTATGNKDIIMLEHIKAMKDHAILGNIGH  362 (494)
T ss_dssp             HG-----GGCSEEEECSSSSCSBCHHHHHHSCTTCEEEECSS
T ss_pred             HH-----hCCCEEEECCCCHHHHHHHHHHhcCCCcEEEEeCC
Confidence            22     2599999999964 344 78889999999999986

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=98.77  E-value=3.2e-08  Score=81.16  Aligned_cols=125  Identities=14%  Similarity=0.121  Sum_probs=84.1

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeee-cCC-------------CchhH----HH
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAF-NYK-------------EEPDL----DA  112 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i-~~~-------------~~~~~----~~  112 (241)
                      ++.+|+|+|+ |.+|+.++++++.+|++|+++++++++.+.++ ++|++.+. +..             .. ++    ..
T Consensus       171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~-~lGa~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~  247 (401)
T 1x13_A          171 PPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ-SMGAEFLELDFKEEAGSGDGYAKVMSD-AFIKAEME  247 (401)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHHH-HTTCEECCC--------CCHHHHHHSH-HHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-HcCCEEEEecccccccccccchhhccH-HHHHHHHH
Confidence            5789999996 99999999999999999999999999988887 88886431 211             00 11    01


Q ss_pred             HHHHHCCCCccEEEeCC---Cc---hh-HHHHHHhhccCCEEEEEeeecccCCCCCCCccChH-HHhhcceEEEEeec
Q 026217          113 ALKRYFPEGINIYFENV---GG---KM-LDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLT-CLISKRIRMEGFLV  182 (241)
Q Consensus       113 ~i~~~~~~~~d~v~d~~---g~---~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  182 (241)
                      .+.+... ++|+|++++   |.   .. ....++.+++++.++.++...+.+.+..   .... .+..+++++.+...
T Consensus       248 ~l~e~~~-~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~~~Gg~v~~~---~~~~p~~~~~gv~i~g~~~  321 (401)
T 1x13_A          248 LFAAQAK-EVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQNGGNCEYT---VPGEIFTTENGVKVIGYTD  321 (401)
T ss_dssp             HHHHHHH-HCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTTC---CTTSEEECTTSCEEECCSC
T ss_pred             HHHHHhC-CCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcCCCCCCcCcc---cCCCceEEECCEEEEeeCC
Confidence            2222222 599999995   31   12 3678899999999999986433222211   1111 14567888887653

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=98.64  E-value=2.3e-07  Score=71.97  Aligned_cols=105  Identities=17%  Similarity=0.228  Sum_probs=76.4

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe---eecCCCchhHHHHHHHHCC--CCccEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGINIY  125 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~---~i~~~~~~~~~~~i~~~~~--~~~d~v  125 (241)
                      .|.+++|+||++++|++.++.+...|++|+++++++++.+.+.+++|...   ..|..+..++...+.+...  |++|++
T Consensus        28 ~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiL  107 (273)
T 4fgs_A           28 NAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDVL  107 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            68899999999999999999999999999999999998888776887532   2344443233322322221  479999


Q ss_pred             EeCCCch-----------h---------------HHHHHHhhccCCEEEEEeeecc
Q 026217          126 FENVGGK-----------M---------------LDAVLLNMRIQGRITLCGMISQ  155 (241)
Q Consensus       126 ~d~~g~~-----------~---------------~~~~~~~l~~~G~~v~~g~~~~  155 (241)
                      ++++|..           .               .+.++..++++|+++.+++..+
T Consensus       108 VNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~  163 (273)
T 4fgs_A          108 FVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAG  163 (273)
T ss_dssp             EECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGG
T ss_pred             EECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhh
Confidence            9998731           1               2344556777899999887554

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=98.59  E-value=2.8e-07  Score=74.90  Aligned_cols=126  Identities=15%  Similarity=0.105  Sum_probs=83.8

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeec-------------CCC--chhH----H
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFN-------------YKE--EPDL----D  111 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~-------------~~~--~~~~----~  111 (241)
                      ++.+|+|+|+ |.+|+.++++++.+|++|++.++++.+.+.++ ++|.+.+-.             |..  ..++    .
T Consensus       189 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~-~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~  266 (405)
T 4dio_A          189 PAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVA-SLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQA  266 (405)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHH-HTTCEECCCCC-----------------CHHHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-HcCCceeecccccccccccccchhhhcchhhhhhhH
Confidence            5689999996 99999999999999999999999999999998 888753211             110  0000    1


Q ss_pred             HHHHHHCCCCccEEEeCCCc-----h--hHHHHHHhhccCCEEEEEeeecccCCCCCCCccChHHHhhcceEEEEeec
Q 026217          112 AALKRYFPEGINIYFENVGG-----K--MLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLV  182 (241)
Q Consensus       112 ~~i~~~~~~~~d~v~d~~g~-----~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (241)
                      ..+.+.. .++|+||.|+..     .  .....++.+++++.++.++...+.+++....   ...+..+++.+.+...
T Consensus       267 ~~l~e~l-~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~~e~t~~---~~~~~~~GV~~~gv~n  340 (405)
T 4dio_A          267 ALVAEHI-AKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVERGGNIEGAEA---GKVTEVGGVRIVGHLN  340 (405)
T ss_dssp             HHHHHHH-HTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGGGTCSBTTCCT---TEEEEETTEEEEECSS
T ss_pred             hHHHHHh-cCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCCCCCCccccCC---CCeEEECCEEEEEeCC
Confidence            1122111 159999999641     1  3478889999999999998765544333211   1112346666666553

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=98.59  E-value=5.2e-08  Score=68.38  Aligned_cols=107  Identities=10%  Similarity=0.090  Sum_probs=75.5

Q ss_pred             hhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHH
Q 026217           35 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL  114 (241)
Q Consensus        35 ~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i  114 (241)
                      +.++++.++.. .....+.+|+|+|+ |.+|...++.++..|++|++.++++++.+.+.++++.+. ....   ++.+.+
T Consensus         5 ~~sv~~~a~~~-~~~~~~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~-~~~~---~~~~~~   78 (144)
T 3oj0_A            5 KVSIPSIVYDI-VRKNGGNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEY-VLIN---DIDSLI   78 (144)
T ss_dssp             CCSHHHHHHHH-HHHHCCCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEE-EECS---CHHHHH
T ss_pred             cccHHHHHHHH-HHhccCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCce-Eeec---CHHHHh
Confidence            34566666633 34345899999996 999999999988889999999999988877655888542 2222   344444


Q ss_pred             HHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEee
Q 026217          115 KRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       115 ~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      .     ++|+|++|++..........+++++.++.++.
T Consensus        79 ~-----~~Divi~at~~~~~~~~~~~l~~g~~vid~~~  111 (144)
T 3oj0_A           79 K-----NNDVIITATSSKTPIVEERSLMPGKLFIDLGN  111 (144)
T ss_dssp             H-----TCSEEEECSCCSSCSBCGGGCCTTCEEEECCS
T ss_pred             c-----CCCEEEEeCCCCCcEeeHHHcCCCCEEEEccC
Confidence            3     49999999996422222266788888888765

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=98.53  E-value=3.7e-07  Score=73.61  Aligned_cols=106  Identities=15%  Similarity=0.092  Sum_probs=76.5

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeee-c--------CCC---ch---hHHHHHH
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAF-N--------YKE---EP---DLDAALK  115 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i-~--------~~~---~~---~~~~~i~  115 (241)
                      ++.+|+|+|+ |.+|+.+++.++.+|++|++.++++++.+.++ ++|++.+- +        +..   .+   .-...+.
T Consensus       183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~-~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~  260 (381)
T 3p2y_A          183 KPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVR-SVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALE  260 (381)
T ss_dssp             CCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHH-HTTCEECCCC-------------CHHHHHHHHHHHH
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEeccccccccccchhhhhHHHHhhhHHHHH
Confidence            6789999996 99999999999999999999999999999999 88875321 1        000   00   0011222


Q ss_pred             HHCCCCccEEEeCCCc-----h--hHHHHHHhhccCCEEEEEeeecccCCC
Q 026217          116 RYFPEGINIYFENVGG-----K--MLDAVLLNMRIQGRITLCGMISQYNND  159 (241)
Q Consensus       116 ~~~~~~~d~v~d~~g~-----~--~~~~~~~~l~~~G~~v~~g~~~~~~~~  159 (241)
                      +.. ..+|+|+.++..     .  .....++.+++++.++.++...+.+++
T Consensus       261 e~l-~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG~~e  310 (381)
T 3p2y_A          261 DAI-TKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGETGGNCE  310 (381)
T ss_dssp             HHH-TTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBT
T ss_pred             HHH-hcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCCCCCccc
Confidence            221 259999998631     1  247889999999999999877665444

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=98.46  E-value=1.1e-06  Score=67.57  Aligned_cols=105  Identities=13%  Similarity=0.148  Sum_probs=72.0

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe---eecCCCchhHHHHHHHHCC--CCccEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGINIY  125 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~---~i~~~~~~~~~~~i~~~~~--~~~d~v  125 (241)
                      .+.+++|+||++++|.+.++.+...|++|+++++++++.+.+.++++...   ..|..+..++...+.....  +++|++
T Consensus         7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   86 (255)
T 4eso_A            7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLL   86 (255)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            57899999999999999999999999999999999988887775665421   2344443123222222211  379999


Q ss_pred             EeCCCch-----------h---------------HHHHHHhhccCCEEEEEeeecc
Q 026217          126 FENVGGK-----------M---------------LDAVLLNMRIQGRITLCGMISQ  155 (241)
Q Consensus       126 ~d~~g~~-----------~---------------~~~~~~~l~~~G~~v~~g~~~~  155 (241)
                      ++++|..           .               .+.+...++++|+++.+++...
T Consensus        87 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~  142 (255)
T 4eso_A           87 HINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVAD  142 (255)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGG
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhh
Confidence            9998721           0               1223334556789999887554

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.41  E-value=4.4e-06  Score=55.98  Aligned_cols=93  Identities=15%  Similarity=0.175  Sum_probs=65.2

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHcCCCe-eecCCCchhHHHHHHHHCCCCccEEEeC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFEN  128 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g-~~v~~~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~i~~~~~~~~d~v~d~  128 (241)
                      ++.+|+|+|+ |.+|..+++.+...| .+|+++++++++.+.+. ..+... ..|..+.    +.+.+... ++|+|++|
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~----~~~~~~~~-~~d~vi~~   76 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN-RMGVATKQVDAKDE----AGLAKALG-GFDAVISA   76 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH-TTTCEEEECCTTCH----HHHHHHTT-TCSEEEEC
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-hCCCcEEEecCCCH----HHHHHHHc-CCCEEEEC
Confidence            4568999998 999999999999999 79999999999988887 666543 3344332    23333322 59999999


Q ss_pred             CCchhHHHHHHhhcc-CCEEEEE
Q 026217          129 VGGKMLDAVLLNMRI-QGRITLC  150 (241)
Q Consensus       129 ~g~~~~~~~~~~l~~-~G~~v~~  150 (241)
                      ++........+.+.. +..++.+
T Consensus        77 ~~~~~~~~~~~~~~~~g~~~~~~   99 (118)
T 3ic5_A           77 APFFLTPIIAKAAKAAGAHYFDL   99 (118)
T ss_dssp             SCGGGHHHHHHHHHHTTCEEECC
T ss_pred             CCchhhHHHHHHHHHhCCCEEEe
Confidence            986544444444444 4454443

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=98.37  E-value=4.2e-06  Score=64.79  Aligned_cols=80  Identities=23%  Similarity=0.353  Sum_probs=58.4

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe---eecCCCchhHHHHHHHHCC--CCccEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGINIY  125 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~---~i~~~~~~~~~~~i~~~~~--~~~d~v  125 (241)
                      .+.+++|+||+|++|.+.++.+...|++|+++++++++.+.+.++++...   ..|..+..++...+.....  +++|++
T Consensus        26 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  105 (266)
T 3grp_A           26 TGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDIL  105 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCEE
Confidence            57899999999999999999999999999999999888777665666532   2344443123322222211  379999


Q ss_pred             EeCCC
Q 026217          126 FENVG  130 (241)
Q Consensus       126 ~d~~g  130 (241)
                      ++++|
T Consensus       106 vnnAg  110 (266)
T 3grp_A          106 VNNAG  110 (266)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99998

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*

Probab=98.32  E-value=4.2e-06  Score=65.33  Aligned_cols=100  Identities=13%  Similarity=0.086  Sum_probs=72.5

Q ss_pred             hcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCCeeecCCCchhHHHHHHHHCCCCc
Q 026217           46 VCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRYFPEGI  122 (241)
Q Consensus        46 ~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~---~g~~~~i~~~~~~~~~~~i~~~~~~~~  122 (241)
                      .++++++++||.+| +|+.|..++.+++..|++|++++.+++..+.+++.   .|.+.+ ..... +..    ++.++.|
T Consensus       117 la~l~~g~rVLDIG-cG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v-~~v~g-Da~----~l~d~~F  189 (298)
T 3fpf_A          117 LGRFRRGERAVFIG-GGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGV-NVITG-DET----VIDGLEF  189 (298)
T ss_dssp             HTTCCTTCEEEEEC-CCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSE-EEEES-CGG----GGGGCCC
T ss_pred             HcCCCCcCEEEEEC-CCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCe-EEEEC-chh----hCCCCCc
Confidence            46889999999999 57777777888888899999999999988888733   254321 11111 111    1223489


Q ss_pred             cEEEeCCCc----hhHHHHHHhhccCCEEEEEee
Q 026217          123 NIYFENVGG----KMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       123 d~v~d~~g~----~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      |+|+.....    ..+..+.+.|++||+++....
T Consensus       190 DvV~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~~  223 (298)
T 3fpf_A          190 DVLMVAALAEPKRRVFRNIHRYVDTETRIIYRTY  223 (298)
T ss_dssp             SEEEECTTCSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred             CEEEECCCccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence            999876542    468889999999999998654

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}

Probab=98.32  E-value=6.1e-07  Score=68.61  Aligned_cols=105  Identities=11%  Similarity=0.059  Sum_probs=73.4

Q ss_pred             HHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCCeeecCCCchhHHHHHHHH
Q 026217           41 AGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRY  117 (241)
Q Consensus        41 ~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~---~g~~~~i~~~~~~~~~~~i~~~  117 (241)
                      ..+ ....+.++++||..|+ | .|..+..+++. +.+|++++.+++..+.+++.   .+.+.-+..... ++.+..  .
T Consensus        82 ~~~-~~~~~~~~~~vldiG~-G-~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~-d~~~~~--~  154 (248)
T 2yvl_A           82 YIA-LKLNLNKEKRVLEFGT-G-SGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNV-DFKDAE--V  154 (248)
T ss_dssp             HHH-HHTTCCTTCEEEEECC-T-TSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECS-CTTTSC--C
T ss_pred             HHH-HhcCCCCCCEEEEeCC-C-ccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEc-Chhhcc--c
Confidence            344 5568899999999994 5 69999999988 88999999999988888733   243111111111 111100  0


Q ss_pred             CCCCccEEEeCCCc--hhHHHHHHhhccCCEEEEEee
Q 026217          118 FPEGINIYFENVGG--KMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       118 ~~~~~d~v~d~~g~--~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      .++++|+|+...+.  ..+..+.+.|+++|+++....
T Consensus       155 ~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  191 (248)
T 2yvl_A          155 PEGIFHAAFVDVREPWHYLEKVHKSLMEGAPVGFLLP  191 (248)
T ss_dssp             CTTCBSEEEECSSCGGGGHHHHHHHBCTTCEEEEEES
T ss_pred             CCCcccEEEECCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence            12379999987763  678899999999999988754

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=98.29  E-value=3.6e-06  Score=64.39  Aligned_cols=80  Identities=18%  Similarity=0.314  Sum_probs=58.7

Q ss_pred             CCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe---eecCCCchhHHHHHHHHCCCCccEE
Q 026217           49 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFPEGINIY  125 (241)
Q Consensus        49 ~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~---~i~~~~~~~~~~~i~~~~~~~~d~v  125 (241)
                      -.++.+++|+||+|++|...++.+...|++|+++++++++.+.+.+++....   ..|..+...+.+.+.+.  +++|++
T Consensus        11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~l   88 (249)
T 3f9i_A           11 DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKT--SNLDIL   88 (249)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTC--SCCSEE
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhc--CCCCEE
Confidence            3568899999999999999999999999999999999988887765655432   23444431232223222  369999


Q ss_pred             EeCCC
Q 026217          126 FENVG  130 (241)
Q Consensus       126 ~d~~g  130 (241)
                      ++++|
T Consensus        89 i~~Ag   93 (249)
T 3f9i_A           89 VCNAG   93 (249)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99998

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=98.28  E-value=6.9e-06  Score=67.06  Aligned_cols=101  Identities=19%  Similarity=0.163  Sum_probs=76.4

Q ss_pred             HHHHHHHHhcC-CCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHH
Q 026217           38 TAYAGFFEVCS-PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKR  116 (241)
Q Consensus        38 ta~~~l~~~~~-~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~  116 (241)
                      ..+.++.+..+ .-.|.+|+|.|. |.+|+.+++.++.+|++|+++.+++.+...+. ..|.. +.      ++.+.+. 
T Consensus       205 s~~~gi~rat~~~L~GktV~ViG~-G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~-~~G~~-v~------~Leeal~-  274 (435)
T 3gvp_A          205 SILDGLKRTTDMMFGGKQVVVCGY-GEVGKGCCAALKAMGSIVYVTEIDPICALQAC-MDGFR-LV------KLNEVIR-  274 (435)
T ss_dssp             HHHHHHHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCE-EC------CHHHHTT-
T ss_pred             HHHHHHHHhhCceecCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEeCChhhhHHHH-HcCCE-ec------cHHHHHh-
Confidence            44556655443 458999999996 99999999999999999999998887766666 66643 21      3333332 


Q ss_pred             HCCCCccEEEeCCCch-hH-HHHHHhhccCCEEEEEee
Q 026217          117 YFPEGINIYFENVGGK-ML-DAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       117 ~~~~~~d~v~d~~g~~-~~-~~~~~~l~~~G~~v~~g~  152 (241)
                          ..|+++.|.|+. .+ ...+..+++++.++.+|.
T Consensus       275 ----~ADIVi~atgt~~lI~~e~l~~MK~gailINvgr  308 (435)
T 3gvp_A          275 ----QVDIVITCTGNKNVVTREHLDRMKNSCIVCNMGH  308 (435)
T ss_dssp             ----TCSEEEECSSCSCSBCHHHHHHSCTTEEEEECSS
T ss_pred             ----cCCEEEECCCCcccCCHHHHHhcCCCcEEEEecC
Confidence                489999998853 34 478899999999999876

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=98.28  E-value=4.3e-06  Score=63.97  Aligned_cols=80  Identities=18%  Similarity=0.242  Sum_probs=58.4

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe---eecCCCchhHHHHHHHHCC--CCccEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGINIY  125 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~---~i~~~~~~~~~~~i~~~~~--~~~d~v  125 (241)
                      .+.+++|+||++++|.+.++.+...|++|+++++++++.+.+.++++...   ..|..+..++...+.+...  +++|++
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   84 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDIL   84 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            57899999999999999999999999999999999988777765666432   2344443223332322211  369999


Q ss_pred             EeCCC
Q 026217          126 FENVG  130 (241)
Q Consensus       126 ~d~~g  130 (241)
                      ++++|
T Consensus        85 v~nAg   89 (247)
T 3rwb_A           85 VNNAS   89 (247)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99998

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=98.26  E-value=6e-06  Score=64.77  Aligned_cols=78  Identities=12%  Similarity=0.196  Sum_probs=58.5

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC---eeecCCCchhHHHHHHHHCCCCccEEEe
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEPDLDAALKRYFPEGINIYFE  127 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~---~~i~~~~~~~~~~~i~~~~~~~~d~v~d  127 (241)
                      .+.+++|+||+|++|.++++.+...|++|+++++++++.+.+.++++..   ...|..+..++...+.+.  +++|++++
T Consensus        15 ~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~--~~iD~lv~   92 (291)
T 3rd5_A           15 AQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGV--SGADVLIN   92 (291)
T ss_dssp             TTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTC--CCEEEEEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhc--CCCCEEEE
Confidence            5789999999999999999999999999999999998888777555432   123444441333333333  47999999


Q ss_pred             CCC
Q 026217          128 NVG  130 (241)
Q Consensus       128 ~~g  130 (241)
                      ++|
T Consensus        93 nAg   95 (291)
T 3rd5_A           93 NAG   95 (291)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            988

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=98.25  E-value=5.4e-06  Score=63.35  Aligned_cols=80  Identities=9%  Similarity=0.172  Sum_probs=57.6

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe-eecCCCchhHHHHHHHHCC--CCccEEEe
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFP--EGINIYFE  127 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~i~~~~~--~~~d~v~d  127 (241)
                      .+.+++|+||+|++|.+.++.+...|++|+++++++++.+.+.+++|... ..|..+..++...+.+...  +++|++++
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lvn   83 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH   83 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            46789999999999999999999999999999999888777664556321 2344443233333332211  36999999


Q ss_pred             CCC
Q 026217          128 NVG  130 (241)
Q Consensus       128 ~~g  130 (241)
                      ++|
T Consensus        84 ~Ag   86 (245)
T 1uls_A           84 YAG   86 (245)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            998

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=98.25  E-value=1.5e-05  Score=61.59  Aligned_cols=105  Identities=16%  Similarity=0.137  Sum_probs=68.0

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC-----C-e--eecCCCchhHHHHHHHHCC--C
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF-----D-E--AFNYKEEPDLDAALKRYFP--E  120 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~-----~-~--~i~~~~~~~~~~~i~~~~~--~  120 (241)
                      .+.+++|+||+|++|.+.++.+...|++|+++++++++.+.+.+++..     . .  ..|..+..++...+.....  +
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   85 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence            467899999999999999999999999999999998776554323321     1 1  2344443233333332211  3


Q ss_pred             CccEEEeCCCc---hhH---------------HHHHHhhcc-----CCEEEEEeeecc
Q 026217          121 GINIYFENVGG---KML---------------DAVLLNMRI-----QGRITLCGMISQ  155 (241)
Q Consensus       121 ~~d~v~d~~g~---~~~---------------~~~~~~l~~-----~G~~v~~g~~~~  155 (241)
                      ++|++++++|.   +.+               +.+++.+..     .|+++.+++...
T Consensus        86 ~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  143 (267)
T 2gdz_A           86 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAG  143 (267)
T ss_dssp             CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG
T ss_pred             CCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccc
Confidence            69999999983   211               233444433     588998887554

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=98.23  E-value=7e-06  Score=63.24  Aligned_cols=80  Identities=21%  Similarity=0.308  Sum_probs=58.5

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe---eecCCCchhHHHHHHHHCC--CCccEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGINIY  125 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~---~i~~~~~~~~~~~i~~~~~--~~~d~v  125 (241)
                      .+.+++|+||++++|.++++.+...|++|+++++++++.+.+.++++...   ..|..+..++.+.+.+...  +++|++
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   87 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDIL   87 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            46789999999999999999999999999999999998887775666431   2344443233333332211  369999


Q ss_pred             EeCCC
Q 026217          126 FENVG  130 (241)
Q Consensus       126 ~d~~g  130 (241)
                      ++++|
T Consensus        88 i~~Ag   92 (261)
T 3n74_A           88 VNNAG   92 (261)
T ss_dssp             EECCC
T ss_pred             EECCc
Confidence            99987

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=98.23  E-value=7.5e-06  Score=63.06  Aligned_cols=80  Identities=14%  Similarity=0.256  Sum_probs=58.3

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe---eecCCCchhHHHHHHHHC--CCCccEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYF--PEGINIY  125 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~---~i~~~~~~~~~~~i~~~~--~~~~d~v  125 (241)
                      .+.++||+||+|++|.+.++.+...|++|++++++.++.+.+.++++...   ..|..+..++...+.+..  -+++|++
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   86 (259)
T 4e6p_A            7 EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDIL   86 (259)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            56899999999999999999999999999999999888777765665431   234444323333333221  1379999


Q ss_pred             EeCCC
Q 026217          126 FENVG  130 (241)
Q Consensus       126 ~d~~g  130 (241)
                      ++++|
T Consensus        87 v~~Ag   91 (259)
T 4e6p_A           87 VNNAA   91 (259)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=98.23  E-value=4.9e-06  Score=63.20  Aligned_cols=79  Identities=13%  Similarity=0.064  Sum_probs=56.7

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC---eeecCCCchhHHHHHHHHCC--CCccEEE
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEPDLDAALKRYFP--EGINIYF  126 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~---~~i~~~~~~~~~~~i~~~~~--~~~d~v~  126 (241)
                      +.+++|+||++++|.+.++.+...|++|+++++++++.+.+.++++..   ...|..+..++...+.+...  +++|+++
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv   82 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELVL   82 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEEE
Confidence            568999999999999999999999999999999998887776555432   12344443233333322211  3799999


Q ss_pred             eCCC
Q 026217          127 ENVG  130 (241)
Q Consensus       127 d~~g  130 (241)
                      +++|
T Consensus        83 nnAg   86 (235)
T 3l6e_A           83 HCAG   86 (235)
T ss_dssp             EECC
T ss_pred             ECCC
Confidence            9987

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=98.22  E-value=1e-05  Score=63.19  Aligned_cols=104  Identities=21%  Similarity=0.288  Sum_probs=67.0

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH-HHH----HHHHcCCCe---eecCCCchhHHHHHHHHCC--C
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK-VDL----LKNKFGFDE---AFNYKEEPDLDAALKRYFP--E  120 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~-~~~----~~~~~g~~~---~i~~~~~~~~~~~i~~~~~--~  120 (241)
                      .+.+++|+||+|++|.++++.+...|++|+++++++++ .+.    ++ ..+...   ..|..+..++...+.+...  +
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  106 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIK-KNGSDAACVKANVGVVEDIVRMFEEAVKIFG  106 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH-HTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHH-HhCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999999999987543 222    23 334321   2344443133332322211  3


Q ss_pred             CccEEEeCCCch-----------h---------------HHHHHHhhccCCEEEEEeeecc
Q 026217          121 GINIYFENVGGK-----------M---------------LDAVLLNMRIQGRITLCGMISQ  155 (241)
Q Consensus       121 ~~d~v~d~~g~~-----------~---------------~~~~~~~l~~~G~~v~~g~~~~  155 (241)
                      ++|++++++|..           .               .+.+.+.++.+|+++.+++...
T Consensus       107 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~  167 (283)
T 1g0o_A          107 KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITG  167 (283)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGG
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhh
Confidence            699999998731           0               1334444556799999987554

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=98.22  E-value=4.5e-06  Score=64.02  Aligned_cols=105  Identities=20%  Similarity=0.275  Sum_probs=71.5

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCCe---eecCCCchhHHHHHHHHCC--CCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDE---AFNYKEEPDLDAALKRYFP--EGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~---~g~~~---~i~~~~~~~~~~~i~~~~~--~~~  122 (241)
                      +|.+++|+||++++|++.++.+...|++|+++++++++.+.+.++   .|...   ..|-.++.++...+.+...  |++
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~i   85 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRI   85 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            578999999999999999999999999999999999887665544   34331   2344444233333332221  479


Q ss_pred             cEEEeCCCc--h--h-----------------------HHHHHHhhc--cCCEEEEEeeecc
Q 026217          123 NIYFENVGG--K--M-----------------------LDAVLLNMR--IQGRITLCGMISQ  155 (241)
Q Consensus       123 d~v~d~~g~--~--~-----------------------~~~~~~~l~--~~G~~v~~g~~~~  155 (241)
                      |++++++|-  .  .                       .+.++..|.  .+|+++.+++..+
T Consensus        86 DiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g  147 (254)
T 4fn4_A           86 DVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAG  147 (254)
T ss_dssp             CEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             CEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhh
Confidence            999999872  1  0                       133444453  3689999987664

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=98.22  E-value=7.7e-06  Score=63.73  Aligned_cols=80  Identities=15%  Similarity=0.295  Sum_probs=58.4

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe---eecCCCchhHHHHHHHHCC--CCccEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGINIY  125 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~---~i~~~~~~~~~~~i~~~~~--~~~d~v  125 (241)
                      .+.+++|+||++++|.+.++.+...|++|+++++++++.+.+.++++...   ..|..+..++...+.+...  +++|++
T Consensus        26 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  105 (277)
T 4dqx_A           26 NQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDVL  105 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            57899999999999999999999999999999999888777765665432   2344443233332332211  369999


Q ss_pred             EeCCC
Q 026217          126 FENVG  130 (241)
Q Consensus       126 ~d~~g  130 (241)
                      ++++|
T Consensus       106 v~nAg  110 (277)
T 4dqx_A          106 VNNAG  110 (277)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99998

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=98.21  E-value=5.1e-06  Score=63.64  Aligned_cols=80  Identities=25%  Similarity=0.446  Sum_probs=58.1

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC---eeecCCCchhHHHHHHHHCC--CCccEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEPDLDAALKRYFP--EGINIY  125 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~---~~i~~~~~~~~~~~i~~~~~--~~~d~v  125 (241)
                      .+.+++|+||++++|.+.++.+...|++|+++++++++.+.+.++++..   ...|..+..++...+.+...  +++|++
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l   87 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDIL   87 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5789999999999999999999999999999999988877766455432   22355554233333332211  379999


Q ss_pred             EeCCC
Q 026217          126 FENVG  130 (241)
Q Consensus       126 ~d~~g  130 (241)
                      ++++|
T Consensus        88 v~nAg   92 (248)
T 3op4_A           88 VNNAG   92 (248)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=98.21  E-value=1e-05  Score=62.95  Aligned_cols=80  Identities=24%  Similarity=0.405  Sum_probs=55.0

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCC-Ce----eecCCCchhHHHHHHHHCC--C
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGF-DE----AFNYKEEPDLDAALKRYFP--E  120 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~---~g~-~~----~i~~~~~~~~~~~i~~~~~--~  120 (241)
                      .+.+++|+||+|++|..+++.+...|++|+++++++++.+.+.++   .+. ..    ..|..+..++...+.+...  +
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  110 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS  110 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            467999999999999999999999999999999998776655423   232 11    2344443233333322211  3


Q ss_pred             CccEEEeCCC
Q 026217          121 GINIYFENVG  130 (241)
Q Consensus       121 ~~d~v~d~~g  130 (241)
                      ++|++|+++|
T Consensus       111 ~iD~vi~~Ag  120 (279)
T 1xg5_A          111 GVDICINNAG  120 (279)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6999999987

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=98.21  E-value=2.2e-05  Score=59.76  Aligned_cols=78  Identities=19%  Similarity=0.203  Sum_probs=55.4

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCee--ecCCCchhHHHHHHHHCCCCccEEEeC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEA--FNYKEEPDLDAALKRYFPEGINIYFEN  128 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~--i~~~~~~~~~~~i~~~~~~~~d~v~d~  128 (241)
                      ++.+++|+||+|++|.+.++.+...|++|+++++++++.+.+.+++....+  .|..+...+...+.  .-+++|+++++
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~~~id~vi~~   83 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALG--SVGPVDLLVNN   83 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHT--TCCCCCEEEEC
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHH--HcCCCCEEEEC
Confidence            568999999999999999999999999999999998877766534432222  34444312222222  11379999999


Q ss_pred             CC
Q 026217          129 VG  130 (241)
Q Consensus       129 ~g  130 (241)
                      +|
T Consensus        84 Ag   85 (244)
T 3d3w_A           84 AA   85 (244)
T ss_dssp             CC
T ss_pred             Cc
Confidence            87

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=98.20  E-value=6.6e-06  Score=63.23  Aligned_cols=80  Identities=15%  Similarity=0.177  Sum_probs=57.2

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC---eeecCCCchhHHHHHHHHCC--CCccEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEPDLDAALKRYFP--EGINIY  125 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~---~~i~~~~~~~~~~~i~~~~~--~~~d~v  125 (241)
                      .+.+++|+||+|++|.+.++.+...|++|+++++++++.+.+.++++..   ...|..+..++...+.+...  +++|++
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l   83 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL   83 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4678999999999999999999999999999999988777665455432   12344443233333332211  369999


Q ss_pred             EeCCC
Q 026217          126 FENVG  130 (241)
Q Consensus       126 ~d~~g  130 (241)
                      ++++|
T Consensus        84 v~nAg   88 (254)
T 1hdc_A           84 VNNAG   88 (254)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=98.20  E-value=1.4e-05  Score=62.97  Aligned_cols=79  Identities=15%  Similarity=0.224  Sum_probs=54.3

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC----eeecCCCc-hhHH---HHHHHHCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD----EAFNYKEE-PDLD---AALKRYFP  119 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~----~~i~~~~~-~~~~---~~i~~~~~  119 (241)
                      .+.+++|+||++++|.++++.+...|++|+++++++++.+.+.+++   +..    ...|..+. ..+.   +.+.+.. 
T Consensus        11 ~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~-   89 (311)
T 3o26_A           11 KRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHF-   89 (311)
T ss_dssp             -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHH-
T ss_pred             CCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhC-
Confidence            5789999999999999999999999999999999988765544343   211    12344442 1222   2232222 


Q ss_pred             CCccEEEeCCC
Q 026217          120 EGINIYFENVG  130 (241)
Q Consensus       120 ~~~d~v~d~~g  130 (241)
                      +++|++++++|
T Consensus        90 g~iD~lv~nAg  100 (311)
T 3o26_A           90 GKLDILVNNAG  100 (311)
T ss_dssp             SSCCEEEECCC
T ss_pred             CCCCEEEECCc
Confidence            37999999998

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=98.20  E-value=1.1e-05  Score=62.32  Aligned_cols=80  Identities=13%  Similarity=0.142  Sum_probs=54.2

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHc---CCC-e--eecCCCchhHHHHHHHHCC--CC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKL-VGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYFP--EG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~-~g~~v~~~~~~~~~~~~~~~~~---g~~-~--~i~~~~~~~~~~~i~~~~~--~~  121 (241)
                      ++.+++|+||+|++|..+++.+.. .|++|++++++.++.+.+.+++   +.. .  ..|..+..++...+.+...  ++
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   82 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            467899999999999998888888 8999999999887665543233   321 1  2344443133333322211  36


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|++|+++|
T Consensus        83 id~li~~Ag   91 (276)
T 1wma_A           83 LDVLVNNAG   91 (276)
T ss_dssp             EEEEEECCC
T ss_pred             CCEEEECCc
Confidence            999999987

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=98.19  E-value=4.2e-06  Score=64.21  Aligned_cols=176  Identities=14%  Similarity=0.099  Sum_probs=100.2

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCCe---eecCCCchhHHHHHHHHC--CCCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDE---AFNYKEEPDLDAALKRYF--PEGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~---~g~~~---~i~~~~~~~~~~~i~~~~--~~~~  122 (241)
                      .|.+++|+||++++|++.++.+...|++|+++++++++.+.+.++   .|...   ..|-.++.+....+.+..  -|++
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   87 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHV   87 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence            688999999999999999999999999999999998876555433   34321   234444423333333332  2479


Q ss_pred             cEEEeCCCch-----------h---------------HHHHHHhhc---cCCEEEEEeeecccCCCCCCC----------
Q 026217          123 NIYFENVGGK-----------M---------------LDAVLLNMR---IQGRITLCGMISQYNNDKPEG----------  163 (241)
Q Consensus       123 d~v~d~~g~~-----------~---------------~~~~~~~l~---~~G~~v~~g~~~~~~~~~~~~----------  163 (241)
                      |++++++|..           .               .+.++..+.   .+|+++.+++..+........          
T Consensus        88 DiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~  167 (255)
T 4g81_D           88 DILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIK  167 (255)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTCHHHHHHHHHHH
T ss_pred             cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCchhHHHHHHHHH
Confidence            9999999731           0               133444552   368999998765431111100          


Q ss_pred             ---ccChHHHhhcceEEEEeecccccchhHH-HH--HHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCC
Q 026217          164 ---VHNLTCLISKRIRMEGFLVPDYFHLYPK-FL--EMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGR  229 (241)
Q Consensus       164 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~  229 (241)
                         ......+-.+++++.....+.......+ .+  ++..+.+.+.   .+..+.-.-+|+.++.-+|.+..
T Consensus       168 ~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~---~Pl~R~g~pediA~~v~fL~S~~  236 (255)
T 4g81_D          168 MLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSS---TPSQRWGRPEELIGTAIFLSSKA  236 (255)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHH---STTCSCBCGGGGHHHHHHHHSGG
T ss_pred             HHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhC---CCCCCCcCHHHHHHHHHHHhCch
Confidence               0011233445677766665544211111 11  1122222111   11112224678999999888643

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=98.19  E-value=1.1e-05  Score=62.07  Aligned_cols=80  Identities=8%  Similarity=0.133  Sum_probs=55.1

Q ss_pred             CCcEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCCe----eecCCCchhHHHHHHHHCC--
Q 026217           51 QGEYVFVSAASG--AVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDE----AFNYKEEPDLDAALKRYFP--  119 (241)
Q Consensus        51 ~~~~vlI~ga~g--~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~---~~g~~~----~i~~~~~~~~~~~i~~~~~--  119 (241)
                      .|.+++|+||+|  |+|++.++.+...|++|+++.++++..+.+.+   +++...    ..|-.++.+....+.+...  
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDV   84 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            578999999876  89999999999999999999998876655542   333321    2344443233333322211  


Q ss_pred             CCccEEEeCCC
Q 026217          120 EGINIYFENVG  130 (241)
Q Consensus       120 ~~~d~v~d~~g  130 (241)
                      |++|++++++|
T Consensus        85 G~iD~lvnnAg   95 (256)
T 4fs3_A           85 GNIDGVYHSIA   95 (256)
T ss_dssp             CCCSEEEECCC
T ss_pred             CCCCEEEeccc
Confidence            47999999887

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=98.18  E-value=8.9e-06  Score=63.47  Aligned_cols=80  Identities=18%  Similarity=0.223  Sum_probs=58.1

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe---eecCCCchhHHHHHHHHCC--CCccEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGINIY  125 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~---~i~~~~~~~~~~~i~~~~~--~~~d~v  125 (241)
                      .+.+++|+||++++|.+.++.+...|++|+++++++++.+.+.++++...   ..|..+..++...+.+...  +++|++
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l   83 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTL   83 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            46789999999999999999999999999999999988877765665431   2344443233333322211  379999


Q ss_pred             EeCCC
Q 026217          126 FENVG  130 (241)
Q Consensus       126 ~d~~g  130 (241)
                      ++++|
T Consensus        84 vnnAg   88 (281)
T 3zv4_A           84 IPNAG   88 (281)
T ss_dssp             ECCCC
T ss_pred             EECCC
Confidence            99987

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=98.18  E-value=7.3e-06  Score=63.84  Aligned_cols=80  Identities=21%  Similarity=0.334  Sum_probs=58.3

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe---eecCCCchhHHHHHHHHCC--CCccEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGINIY  125 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~---~i~~~~~~~~~~~i~~~~~--~~~d~v  125 (241)
                      .+.+++|+||++++|.+.++.+...|++|+++++++++.+.+.++++...   ..|..+..++...+.+...  +++|++
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  107 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKL  107 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            57899999999999999999999999999999999888777765665431   2344444233322322211  379999


Q ss_pred             EeCCC
Q 026217          126 FENVG  130 (241)
Q Consensus       126 ~d~~g  130 (241)
                      ++++|
T Consensus       108 vnnAg  112 (277)
T 3gvc_A          108 VANAG  112 (277)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=98.18  E-value=7.5e-06  Score=63.60  Aligned_cols=81  Identities=17%  Similarity=0.205  Sum_probs=57.6

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC-e--eecCCCchhHHHHHHHHCC--CCccE
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-E--AFNYKEEPDLDAALKRYFP--EGINI  124 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~-~--~i~~~~~~~~~~~i~~~~~--~~~d~  124 (241)
                      ..+.+++|+||++++|.+.++.+...|++|+++++++++.+.+.++++.. .  ..|..+..++...+.+...  +++|+
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  105 (272)
T 4dyv_A           26 TGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDV  105 (272)
T ss_dssp             --CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            35788999999999999999999999999999999998887776566532 1  2344443233333322211  37999


Q ss_pred             EEeCCC
Q 026217          125 YFENVG  130 (241)
Q Consensus       125 v~d~~g  130 (241)
                      +++++|
T Consensus       106 lVnnAg  111 (272)
T 4dyv_A          106 LFNNAG  111 (272)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999987

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=98.17  E-value=2.5e-05  Score=63.98  Aligned_cols=101  Identities=19%  Similarity=0.104  Sum_probs=75.7

Q ss_pred             HHHHHHHHhcC-CCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHH
Q 026217           38 TAYAGFFEVCS-PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKR  116 (241)
Q Consensus        38 ta~~~l~~~~~-~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~  116 (241)
                      ..+.++.+..+ .-.|.+++|.|. |.+|+.+++.++.+|++|+++.+++.+...+. ..|.. +.      ++.+.++ 
T Consensus       232 slvdgI~Ratg~~L~GKTVgVIG~-G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~-~~G~~-vv------~LeElL~-  301 (464)
T 3n58_A          232 SLVDGIRRGTDVMMAGKVAVVCGY-GDVGKGSAQSLAGAGARVKVTEVDPICALQAA-MDGFE-VV------TLDDAAS-  301 (464)
T ss_dssp             HHHHHHHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHH-HTTCE-EC------CHHHHGG-
T ss_pred             HHHHHHHHhcCCcccCCEEEEECc-CHHHHHHHHHHHHCCCEEEEEeCCcchhhHHH-hcCce-ec------cHHHHHh-
Confidence            34555544433 468999999995 99999999999999999999998877655555 55653 22      3433333 


Q ss_pred             HCCCCccEEEeCCCch-h-HHHHHHhhccCCEEEEEee
Q 026217          117 YFPEGINIYFENVGGK-M-LDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       117 ~~~~~~d~v~d~~g~~-~-~~~~~~~l~~~G~~v~~g~  152 (241)
                          ..|+++.++|+. . -...+..+++++.++.+|.
T Consensus       302 ----~ADIVv~atgt~~lI~~e~l~~MK~GAILINvGR  335 (464)
T 3n58_A          302 ----TADIVVTTTGNKDVITIDHMRKMKDMCIVGNIGH  335 (464)
T ss_dssp             ----GCSEEEECCSSSSSBCHHHHHHSCTTEEEEECSS
T ss_pred             ----hCCEEEECCCCccccCHHHHhcCCCCeEEEEcCC
Confidence                489999999864 3 2688889999999998876

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=98.17  E-value=1.1e-05  Score=61.70  Aligned_cols=103  Identities=11%  Similarity=-0.006  Sum_probs=69.6

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe--eecCCCchhHHHHHHHHCC--CCccEEEeC
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFP--EGINIYFEN  128 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~--~i~~~~~~~~~~~i~~~~~--~~~d~v~d~  128 (241)
                      .+|+|+||++++|++.++.+...|++|+++++++++.+.+.++.+...  ..|..++.+....+.+...  |++|+++++
T Consensus         3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVNN   82 (247)
T 3ged_A            3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVNN   82 (247)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            589999999999999999999999999999999988887773433211  2344443233333322221  379999999


Q ss_pred             CCch-----------hH---------------HHHHHhh-ccCCEEEEEeeecc
Q 026217          129 VGGK-----------ML---------------DAVLLNM-RIQGRITLCGMISQ  155 (241)
Q Consensus       129 ~g~~-----------~~---------------~~~~~~l-~~~G~~v~~g~~~~  155 (241)
                      +|..           .+               +.+...+ +.+|+++.+++..+
T Consensus        83 AG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~  136 (247)
T 3ged_A           83 ACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRA  136 (247)
T ss_dssp             CCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGG
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeeccc
Confidence            8721           11               2233344 35799999987654

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=98.17  E-value=6.5e-06  Score=63.89  Aligned_cols=80  Identities=14%  Similarity=0.172  Sum_probs=58.1

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC---eeecCCCchhHHHHHHHHCC--CCccEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEPDLDAALKRYFP--EGINIY  125 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~---~~i~~~~~~~~~~~i~~~~~--~~~d~v  125 (241)
                      .+.+++|+||++++|.+.++.+...|++|+++++++++.+.+.++++..   ...|..+..++...+.....  +++|++
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   89 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIV   89 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4789999999999999999999999999999999988777666566543   23355554233333322211  369999


Q ss_pred             EeCCC
Q 026217          126 FENVG  130 (241)
Q Consensus       126 ~d~~g  130 (241)
                      ++++|
T Consensus        90 v~nAg   94 (271)
T 3tzq_B           90 DNNAA   94 (271)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=98.17  E-value=2e-05  Score=59.04  Aligned_cols=96  Identities=9%  Similarity=0.079  Sum_probs=64.8

Q ss_pred             cEEEEEcCCchHHHHHHHHHH-HcCCEEEEEeCCHH-HHHHHHHHcCCC-e--eecCCCchhHHHHHHHHCCCCccEEEe
Q 026217           53 EYVFVSAASGAVGQLVGQFAK-LVGCYVVGSAGSKD-KVDLLKNKFGFD-E--AFNYKEEPDLDAALKRYFPEGINIYFE  127 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~-~~g~~v~~~~~~~~-~~~~~~~~~g~~-~--~i~~~~~~~~~~~i~~~~~~~~d~v~d  127 (241)
                      .+|+|+||+|++|...++.+. ..|++|++++++++ +.+.+. ..+.. .  ..|..+..++.+.+     .++|++++
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~-----~~~d~vv~   79 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI-IDHERVTVIEGSFQNPGXLEQAV-----TNAEVVFV   79 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH-HTSTTEEEEECCTTCHHHHHHHH-----TTCSEEEE
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc-cCCCceEEEECCCCCHHHHHHHH-----cCCCEEEE
Confidence            469999999999999988888 89999999999988 666553 22222 1  22444431222222     25999999


Q ss_pred             CCCchh--HHHHHHhhcc--CCEEEEEeeec
Q 026217          128 NVGGKM--LDAVLLNMRI--QGRITLCGMIS  154 (241)
Q Consensus       128 ~~g~~~--~~~~~~~l~~--~G~~v~~g~~~  154 (241)
                      ++|...  .+.+++.+..  .++++.++...
T Consensus        80 ~ag~~n~~~~~~~~~~~~~~~~~iv~iSs~~  110 (221)
T 3r6d_A           80 GAMESGSDMASIVKALSRXNIRRVIGVSMAG  110 (221)
T ss_dssp             SCCCCHHHHHHHHHHHHHTTCCEEEEEEETT
T ss_pred             cCCCCChhHHHHHHHHHhcCCCeEEEEeece
Confidence            998521  4455555554  36899887744

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=98.16  E-value=9.9e-06  Score=62.33  Aligned_cols=80  Identities=16%  Similarity=0.236  Sum_probs=57.3

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC---C---eeecCCCchhHHHHHHHHCC--CCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF---D---EAFNYKEEPDLDAALKRYFP--EGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~---~---~~i~~~~~~~~~~~i~~~~~--~~~  122 (241)
                      .+.+++|+||++++|.+.++.+...|++|+++++++++.+.+.+++..   .   ...|..+..++...+.+...  +++
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   84 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRI   84 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            468999999999999999999999999999999999887776645432   1   12344443233333332211  379


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |++++++|
T Consensus        85 d~lv~nAg   92 (257)
T 3imf_A           85 DILINNAA   92 (257)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999998

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=98.16  E-value=1.1e-05  Score=62.44  Aligned_cols=80  Identities=10%  Similarity=0.136  Sum_probs=57.3

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC---eeecCCCchhHHHHHHHHCC--CCccEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEPDLDAALKRYFP--EGINIY  125 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~---~~i~~~~~~~~~~~i~~~~~--~~~d~v  125 (241)
                      .+.+++|+||+|++|.++++.+...|++|+++++++++.+.+.++++..   ...|..+..++...+.+...  +++|++
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l   84 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV   84 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcEE
Confidence            4678999999999999999999999999999999988877766455422   12344443233333332211  369999


Q ss_pred             EeCCC
Q 026217          126 FENVG  130 (241)
Q Consensus       126 ~d~~g  130 (241)
                      ++++|
T Consensus        85 vnnAg   89 (263)
T 2a4k_A           85 AHFAG   89 (263)
T ss_dssp             EEGGG
T ss_pred             EECCC
Confidence            99987

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=98.15  E-value=5.1e-06  Score=64.88  Aligned_cols=80  Identities=18%  Similarity=0.245  Sum_probs=54.8

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC----CC-e--eecCCCchhHHHHHHHHCC--CC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFG----FD-E--AFNYKEEPDLDAALKRYFP--EG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g----~~-~--~i~~~~~~~~~~~i~~~~~--~~  121 (241)
                      .|.+++|+||+|++|.+.++.+...|++|+++++++++.+.+.+++.    .. .  ..|..+..++...+.+...  ++
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  111 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFAR  111 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999999887666553431    11 1  2345444233333322211  37


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|++++++|
T Consensus       112 iD~lvnnAG  120 (281)
T 4dry_A          112 LDLLVNNAG  120 (281)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=98.15  E-value=1e-05  Score=62.61  Aligned_cols=80  Identities=14%  Similarity=0.311  Sum_probs=56.4

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCCe---eecCCCchhHHHHHHHHCC--CCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEPDLDAALKRYFP--EGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---~i~~~~~~~~~~~i~~~~~--~~~  122 (241)
                      .+.+++|+||+|++|++.++.+...|++|+++++++++.+.+.+++   +...   ..|..+..++...+.+...  +++
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   82 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRI   82 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999999999999999999999999999999988776655343   3321   2355443233333322211  369


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |++++++|
T Consensus        83 D~lVnnAG   90 (264)
T 3tfo_A           83 DVLVNNAG   90 (264)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=98.14  E-value=1.4e-05  Score=61.87  Aligned_cols=80  Identities=16%  Similarity=0.250  Sum_probs=55.8

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----CCCe---eecCCCchhHHHHHHHHCC--CC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF----GFDE---AFNYKEEPDLDAALKRYFP--EG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~----g~~~---~i~~~~~~~~~~~i~~~~~--~~  121 (241)
                      .+.+++|+||+|++|.+.++.+...|++|+++++++++.+.+.+++    +...   ..|..+..++...+.+...  ++
T Consensus        20 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   99 (267)
T 1vl8_A           20 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGK   99 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999999999999999999999999999999987765544233    4321   2344443233333322211  36


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|++++++|
T Consensus       100 iD~lvnnAg  108 (267)
T 1vl8_A          100 LDTVVNAAG  108 (267)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=98.14  E-value=2.8e-05  Score=59.34  Aligned_cols=80  Identities=11%  Similarity=0.148  Sum_probs=55.7

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC--C-e--eecCCCchhHHHHHHHHCC--CCcc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF--D-E--AFNYKEEPDLDAALKRYFP--EGIN  123 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~--~-~--~i~~~~~~~~~~~i~~~~~--~~~d  123 (241)
                      ++.+++|+||+|++|...++.+...|++|+++++++++.+.+.+++..  . .  ..|..+..++...+.....  +++|
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   84 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVS   84 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            467899999999999999999999999999999998877665534431  1 1  2344443133333322211  3699


Q ss_pred             EEEeCCC
Q 026217          124 IYFENVG  130 (241)
Q Consensus       124 ~v~d~~g  130 (241)
                      ++++++|
T Consensus        85 ~li~~Ag   91 (251)
T 1zk4_A           85 TLVNNAG   91 (251)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999987

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=98.13  E-value=2.1e-05  Score=59.58  Aligned_cols=96  Identities=19%  Similarity=0.170  Sum_probs=66.5

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC-Cee-ecCCCchhHHHHHHHHCCCCccEEEeC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF-DEA-FNYKEEPDLDAALKRYFPEGINIYFEN  128 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~-~~~-i~~~~~~~~~~~i~~~~~~~~d~v~d~  128 (241)
                      .+.+|+|+||+|++|...++.+...|++|+++++++++.+.+. ..+. ..+ .|..      +.+.+.. +++|+|+++
T Consensus        20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~-~~~~~~~~~~Dl~------~~~~~~~-~~~D~vi~~   91 (236)
T 3e8x_A           20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELR-ERGASDIVVANLE------EDFSHAF-ASIDAVVFA   91 (236)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HTTCSEEEECCTT------SCCGGGG-TTCSEEEEC
T ss_pred             CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHH-hCCCceEEEcccH------HHHHHHH-cCCCEEEEC
Confidence            4678999999999999999999999999999999999888777 5565 321 1222      2222222 269999999


Q ss_pred             CCchh--------------HHHHHHhhcc--CCEEEEEeeec
Q 026217          129 VGGKM--------------LDAVLLNMRI--QGRITLCGMIS  154 (241)
Q Consensus       129 ~g~~~--------------~~~~~~~l~~--~G~~v~~g~~~  154 (241)
                      +|...              ...+++.+..  .++++.++...
T Consensus        92 ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~  133 (236)
T 3e8x_A           92 AGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVG  133 (236)
T ss_dssp             CCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTT
T ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCC
Confidence            98321              1233444433  37899887743

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=98.13  E-value=1.5e-05  Score=61.66  Aligned_cols=80  Identities=14%  Similarity=0.189  Sum_probs=55.6

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc-----CCC-e--eecCCCchhHHHHHHHHCC--C
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF-----GFD-E--AFNYKEEPDLDAALKRYFP--E  120 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~-----g~~-~--~i~~~~~~~~~~~i~~~~~--~  120 (241)
                      .+.+++|+||+|++|.+.++.+...|++|+++++++++.+.+.+++     +.. .  ..|..+..++...+.+...  +
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   91 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG   91 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4678999999999999999999999999999999987766544233     332 1  2344443233333332211  3


Q ss_pred             CccEEEeCCC
Q 026217          121 GINIYFENVG  130 (241)
Q Consensus       121 ~~d~v~d~~g  130 (241)
                      ++|++++++|
T Consensus        92 ~id~lv~nAg  101 (267)
T 1iy8_A           92 RIDGFFNNAG  101 (267)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6999999987

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=98.13  E-value=1.6e-05  Score=60.73  Aligned_cols=80  Identities=23%  Similarity=0.392  Sum_probs=55.8

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC-e--eecCCCchhHHHHHHHHCC--CCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYFP--EGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~--~i~~~~~~~~~~~i~~~~~--~~~  122 (241)
                      .+.+++|+||+|++|.+.++.+...|++|+++++++++.+.+.+++   +.. .  ..|..+..++...+.+...  +++
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   85 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGL   85 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999999999999999999999999999999988766554333   432 1  2344443233333322211  369


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |++++++|
T Consensus        86 d~lv~nAg   93 (247)
T 2jah_A           86 DILVNNAG   93 (247)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=98.13  E-value=1.6e-05  Score=61.30  Aligned_cols=80  Identities=19%  Similarity=0.283  Sum_probs=55.6

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----CCCe---eecCCCchhHHHHHHHHCC--CC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF----GFDE---AFNYKEEPDLDAALKRYFP--EG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~----g~~~---~i~~~~~~~~~~~i~~~~~--~~  121 (241)
                      .+.+++|+||+|++|.+.++.+...|++|+++++++++.+.+.+++    +...   ..|..+..++...+.+...  ++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGG   85 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999999999999999999999999999999987765544233    4321   2344443233333322211  36


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|++++++|
T Consensus        86 id~lv~~Ag   94 (263)
T 3ai3_A           86 ADILVNNAG   94 (263)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=98.12  E-value=1.2e-05  Score=61.77  Aligned_cols=80  Identities=20%  Similarity=0.211  Sum_probs=57.0

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe---eecCCCchhHHHHHHHHCC--CCccEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGINIY  125 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~---~i~~~~~~~~~~~i~~~~~--~~~d~v  125 (241)
                      .+.+++|+||+|++|.+.++.+...|++|+++++++++.+.+.++++...   ..|..+..++...+.....  +++|++
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   84 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL   84 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            46789999999999999999999999999999999888776664655321   2344443233333322211  369999


Q ss_pred             EeCCC
Q 026217          126 FENVG  130 (241)
Q Consensus       126 ~d~~g  130 (241)
                      ++++|
T Consensus        85 v~~Ag   89 (253)
T 1hxh_A           85 VNNAG   89 (253)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=98.12  E-value=4.2e-05  Score=59.30  Aligned_cols=104  Identities=16%  Similarity=0.248  Sum_probs=66.8

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHH---HcCCCe---eecCCCchhHHHHHHHHCC--CC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS-KDKVDLLKN---KFGFDE---AFNYKEEPDLDAALKRYFP--EG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~-~~~~~~~~~---~~g~~~---~i~~~~~~~~~~~i~~~~~--~~  121 (241)
                      .+.+++|+||++++|.+.++.+...|++|++++++ .++.+.+.+   ..|...   ..|..+..++...+.+...  ++
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  109 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGG  109 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999998654 344443332   334321   2344443233333332211  37


Q ss_pred             ccEEEeCCCch--------------------------hHHHHHHhhccCCEEEEEeeec
Q 026217          122 INIYFENVGGK--------------------------MLDAVLLNMRIQGRITLCGMIS  154 (241)
Q Consensus       122 ~d~v~d~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~  154 (241)
                      +|++++++|..                          ..+.+...++.+|+++.++...
T Consensus       110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~  168 (271)
T 3v2g_A          110 LDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNL  168 (271)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGG
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChh
Confidence            99999998721                          1233445566789999987643

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=98.12  E-value=1.6e-05  Score=62.63  Aligned_cols=80  Identities=19%  Similarity=0.303  Sum_probs=57.0

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC---eeecCCCchhHHHHHHHHCC--CCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEPDLDAALKRYFP--EGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~~i~~~~~~~~~~~i~~~~~--~~~  122 (241)
                      .+.+++|+||+|++|.+.++.+...|++|+++++++++.+.+.+++   +..   ...|..+..++...+.+...  +++
T Consensus        30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  109 (301)
T 3tjr_A           30 DGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGV  109 (301)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence            6789999999999999999999999999999999988776655343   322   12344443233333332211  369


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |++++++|
T Consensus       110 d~lvnnAg  117 (301)
T 3tjr_A          110 DVVFSNAG  117 (301)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999988

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=98.12  E-value=2.3e-05  Score=60.33  Aligned_cols=80  Identities=20%  Similarity=0.280  Sum_probs=55.8

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc-----CCC-e--eecCCCchhHHHHHHHHCCC-C
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF-----GFD-E--AFNYKEEPDLDAALKRYFPE-G  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~-----g~~-~--~i~~~~~~~~~~~i~~~~~~-~  121 (241)
                      .+.+++|+||+|++|.+.++.+...|++|+++++++++.+.+.+++     +.. .  ..|..+..++...+.+.... +
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGG   85 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            4678999999999999999999999999999999987766554333     211 1  23555442333333333222 4


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|++++++|
T Consensus        86 id~lv~~Ag   94 (260)
T 2z1n_A           86 ADILVYSTG   94 (260)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999997

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=98.11  E-value=1.8e-05  Score=61.56  Aligned_cols=80  Identities=15%  Similarity=0.289  Sum_probs=55.4

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC---eeecCCCchhHHHHHHHHC--CCCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEPDLDAALKRYF--PEGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~~i~~~~~~~~~~~i~~~~--~~~~  122 (241)
                      .+.+++|+||+|++|.++++.+...|++|+++++++++.+.+.+++   +..   ...|..+..++...+.+..  -+++
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  100 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV  100 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            4678999999999999999999999999999999987765544233   432   1234444323332232221  1369


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |++++++|
T Consensus       101 D~lv~~Ag  108 (277)
T 2rhc_B          101 DVLVNNAG  108 (277)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=98.11  E-value=1.9e-05  Score=60.37  Aligned_cols=77  Identities=18%  Similarity=0.348  Sum_probs=56.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC---eeecCCCchhHHHHHHHHCC--CCccEEEeC
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEPDLDAALKRYFP--EGINIYFEN  128 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~---~~i~~~~~~~~~~~i~~~~~--~~~d~v~d~  128 (241)
                      +++|+||+|++|.+.++.+...|++|+++++++++.+.+.++++..   ...|..+..++...+.+...  +++|+++++
T Consensus         2 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnn   81 (248)
T 3asu_A            2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNN   81 (248)
T ss_dssp             EEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEEC
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence            6899999999999999999999999999999988877766466532   12355554234444443332  379999999


Q ss_pred             CC
Q 026217          129 VG  130 (241)
Q Consensus       129 ~g  130 (241)
                      +|
T Consensus        82 Ag   83 (248)
T 3asu_A           82 AG   83 (248)
T ss_dssp             CC
T ss_pred             CC
Confidence            87

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=98.10  E-value=3e-05  Score=60.37  Aligned_cols=78  Identities=19%  Similarity=0.165  Sum_probs=58.2

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe---eecCCCchhHHHHHHHHCC-CCccEEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP-EGINIYF  126 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~---~i~~~~~~~~~~~i~~~~~-~~~d~v~  126 (241)
                      .+.+++|+||++++|.+.++.+...|++|+++++++++.+.+.++++...   ..|..+..++...+..... +++|+++
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~lv  108 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYAV  108 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeEE
Confidence            57899999999999999999999999999999999988887775776431   2344444234444444422 3799999


Q ss_pred             eC
Q 026217          127 EN  128 (241)
Q Consensus       127 d~  128 (241)
                      ++
T Consensus       109 ~~  110 (281)
T 3ppi_A          109 VA  110 (281)
T ss_dssp             EC
T ss_pred             Ec
Confidence            88

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=98.10  E-value=2.1e-05  Score=59.38  Aligned_cols=76  Identities=13%  Similarity=0.124  Sum_probs=55.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC---eeecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~---~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      +++|+||+|++|.+.++.+...|++|+++++++++.+.+.++++..   ...|..+. +-.+.+.+...+.+|++++++|
T Consensus         3 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~d~lv~~Ag   81 (230)
T 3guy_A            3 LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASH-QEVEQLFEQLDSIPSTVVHSAG   81 (230)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCH-HHHHHHHHSCSSCCSEEEECCC
T ss_pred             EEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCH-HHHHHHHHHHhhcCCEEEEeCC
Confidence            5899999999999999999999999999999999888877566432   12344444 2223332222334599999987

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=98.10  E-value=1.5e-05  Score=61.41  Aligned_cols=80  Identities=15%  Similarity=0.184  Sum_probs=56.4

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC---eeecCCCchhHHHHHHHHCC--CCccEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEPDLDAALKRYFP--EGINIY  125 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~---~~i~~~~~~~~~~~i~~~~~--~~~d~v  125 (241)
                      .+.+++|+||+|++|.+.++.+...|++|+++++++++.+.+.+++...   ...|..+..++...+.+...  +++|++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l   85 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL   85 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4678999999999999999999999999999999988776665344321   12344443233333332211  369999


Q ss_pred             EeCCC
Q 026217          126 FENVG  130 (241)
Q Consensus       126 ~d~~g  130 (241)
                      ++++|
T Consensus        86 v~~Ag   90 (260)
T 1nff_A           86 VNNAG   90 (260)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=98.10  E-value=1.8e-05  Score=60.62  Aligned_cols=80  Identities=16%  Similarity=0.238  Sum_probs=55.9

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc-----C-CC-e--eecCCCchhHHHHHHHHCC--
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF-----G-FD-E--AFNYKEEPDLDAALKRYFP--  119 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~-----g-~~-~--~i~~~~~~~~~~~i~~~~~--  119 (241)
                      .+.+++|+||++++|.+.++.+...|++|+++++++++.+.+.+++     + .. .  ..|..+..++...+.+...  
T Consensus         6 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   85 (250)
T 3nyw_A            6 QKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKY   85 (250)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhc
Confidence            4678999999999999999999899999999999988776655333     2 11 1  2344443233333332211  


Q ss_pred             CCccEEEeCCC
Q 026217          120 EGINIYFENVG  130 (241)
Q Consensus       120 ~~~d~v~d~~g  130 (241)
                      +++|++++++|
T Consensus        86 g~iD~lvnnAg   96 (250)
T 3nyw_A           86 GAVDILVNAAA   96 (250)
T ss_dssp             CCEEEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            37999999998

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=98.10  E-value=1.9e-05  Score=61.25  Aligned_cols=80  Identities=15%  Similarity=0.160  Sum_probs=56.6

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe--eecCCCchhHHHHHHHHCC--CCccEEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFP--EGINIYF  126 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~--~i~~~~~~~~~~~i~~~~~--~~~d~v~  126 (241)
                      .+.+++|+||+|++|.+.++.+...|++|+++++++++.+.+.+++....  ..|..+..++...+.+...  +++|+++
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv   87 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV   87 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            56899999999999999999999999999999999888776664543212  2344443133332322211  3699999


Q ss_pred             eCCC
Q 026217          127 ENVG  130 (241)
Q Consensus       127 d~~g  130 (241)
                      +++|
T Consensus        88 ~nAg   91 (270)
T 1yde_A           88 NNAG   91 (270)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9987

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=98.10  E-value=6.6e-06  Score=63.29  Aligned_cols=80  Identities=19%  Similarity=0.169  Sum_probs=50.2

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC-e--eecCCCchhHHHHHHHHCC--CCccEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-E--AFNYKEEPDLDAALKRYFP--EGINIY  125 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~-~--~i~~~~~~~~~~~i~~~~~--~~~d~v  125 (241)
                      .+.+++|+||++++|.+.++.+...|++|+++++++++.+.+.++++.. .  ..|..+..++...+.+...  +++|++
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   85 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHGL   85 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5678999999999999999999999999999999887766655455432 1  2344443233333332211  369999


Q ss_pred             EeCCC
Q 026217          126 FENVG  130 (241)
Q Consensus       126 ~d~~g  130 (241)
                      ++++|
T Consensus        86 v~nAg   90 (257)
T 3tpc_A           86 VNCAG   90 (257)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=98.10  E-value=1.4e-05  Score=61.11  Aligned_cols=80  Identities=14%  Similarity=0.167  Sum_probs=56.2

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe----eecCCCchhHHHHHHHHC-CCCccEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE----AFNYKEEPDLDAALKRYF-PEGINIY  125 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~----~i~~~~~~~~~~~i~~~~-~~~~d~v  125 (241)
                      .+.+++|+||+|++|...++.+...|++|+++++++++.+.+.++++...    ..|..+..++...+.... -+++|++
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~l   89 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSIL   89 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcEE
Confidence            46789999999999999999999999999999999887776654554321    234444312322222211 1469999


Q ss_pred             EeCCC
Q 026217          126 FENVG  130 (241)
Q Consensus       126 ~d~~g  130 (241)
                      ++++|
T Consensus        90 i~~Ag   94 (254)
T 2wsb_A           90 VNSAG   94 (254)
T ss_dssp             EECCC
T ss_pred             EECCc
Confidence            99987

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=98.10  E-value=1.7e-05  Score=61.58  Aligned_cols=80  Identities=8%  Similarity=0.091  Sum_probs=53.8

Q ss_pred             CCcEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHHcCCCe--eecCCCchhHHHHHHHHC--CCC
Q 026217           51 QGEYVFVSAAS--GAVGQLVGQFAKLVGCYVVGSAGSKD---KVDLLKNKFGFDE--AFNYKEEPDLDAALKRYF--PEG  121 (241)
Q Consensus        51 ~~~~vlI~ga~--g~~G~~avqla~~~g~~v~~~~~~~~---~~~~~~~~~g~~~--~i~~~~~~~~~~~i~~~~--~~~  121 (241)
                      .+.+++|+||+  |++|.++++.+...|++|++++++++   ..+.+.++.+...  ..|..+..++...+.+..  -++
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   84 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGS   84 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46789999998  99999999999999999999998764   4444442344222  234444322332232221  137


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|++++++|
T Consensus        85 id~lv~nAg   93 (275)
T 2pd4_A           85 LDFIVHSVA   93 (275)
T ss_dssp             EEEEEECCC
T ss_pred             CCEEEECCc
Confidence            999999987

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.10  E-value=1.4e-05  Score=56.49  Aligned_cols=93  Identities=17%  Similarity=0.176  Sum_probs=61.4

Q ss_pred             CCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeC
Q 026217           49 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFEN  128 (241)
Q Consensus        49 ~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~  128 (241)
                      ..++++|+|.|+ |.+|+.+++.++..|.+|+++++++++.+.+++..|.. ++..+.. + .+.+.+..-.++|+|+.|
T Consensus        16 ~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~-~~~~d~~-~-~~~l~~~~~~~ad~Vi~~   91 (155)
T 2g1u_A           16 KQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGF-TVVGDAA-E-FETLKECGMEKADMVFAF   91 (155)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSE-EEESCTT-S-HHHHHTTTGGGCSEEEEC
T ss_pred             ccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCc-EEEecCC-C-HHHHHHcCcccCCEEEEE
Confidence            457889999996 99999999999999999999999888776654234543 3322211 2 122332211279999999


Q ss_pred             CCch-hHHHHHHhhcc-CC
Q 026217          129 VGGK-MLDAVLLNMRI-QG  145 (241)
Q Consensus       129 ~g~~-~~~~~~~~l~~-~G  145 (241)
                      ++.. ....+...++. ++
T Consensus        92 ~~~~~~~~~~~~~~~~~~~  110 (155)
T 2g1u_A           92 TNDDSTNFFISMNARYMFN  110 (155)
T ss_dssp             SSCHHHHHHHHHHHHHTSC
T ss_pred             eCCcHHHHHHHHHHHHHCC
Confidence            9964 33444445554 44

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=98.10  E-value=1.1e-05  Score=62.88  Aligned_cols=80  Identities=18%  Similarity=0.309  Sum_probs=57.5

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe---eecCCCchhHHHHHHHHCC--CCccEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGINIY  125 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~---~i~~~~~~~~~~~i~~~~~--~~~d~v  125 (241)
                      .+.+++|+||+|++|.++++.+...|++|+++++++++.+.+.++++...   ..|..+..++...+.+...  +++|++
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~l   83 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVL   83 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            46789999999999999999999999999999999888777664555321   2344443233333332211  369999


Q ss_pred             EeCCC
Q 026217          126 FENVG  130 (241)
Q Consensus       126 ~d~~g  130 (241)
                      ++++|
T Consensus        84 v~~Ag   88 (281)
T 3m1a_A           84 VNNAG   88 (281)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99997

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=98.10  E-value=1.9e-05  Score=60.87  Aligned_cols=80  Identities=15%  Similarity=0.229  Sum_probs=56.6

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC---eeecCCCchhHHHHHHHHCC--CCccEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEPDLDAALKRYFP--EGINIY  125 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~---~~i~~~~~~~~~~~i~~~~~--~~~d~v  125 (241)
                      .+.+++|+||+|++|.+.++.+...|++|+++++++++.+.+.+++...   ...|..+..++...+.+...  +++|++
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~l   90 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLL   90 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4678999999999999999999999999999999988777665344321   12344443233333332211  369999


Q ss_pred             EeCCC
Q 026217          126 FENVG  130 (241)
Q Consensus       126 ~d~~g  130 (241)
                      ++++|
T Consensus        91 v~~Ag   95 (263)
T 3ak4_A           91 CANAG   95 (263)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=98.09  E-value=3.6e-05  Score=60.39  Aligned_cols=92  Identities=18%  Similarity=0.238  Sum_probs=70.7

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCC
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV  129 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~  129 (241)
                      -+|.+|+|+|+ |.+|+.+++.++.+|++|++.++++++.+.+. ++|.. .++.  . ++.+.+     ..+|+|+.++
T Consensus       153 l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~-~~g~~-~~~~--~-~l~~~l-----~~aDvVi~~~  221 (293)
T 3d4o_A          153 IHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLARIA-EMGME-PFHI--S-KAAQEL-----RDVDVCINTI  221 (293)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTSE-EEEG--G-GHHHHT-----TTCSEEEECC
T ss_pred             CCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HCCCe-ecCh--h-hHHHHh-----cCCCEEEECC
Confidence            46899999995 99999999999999999999999988877777 77764 2222  1 333333     2599999999


Q ss_pred             Cchh-HHHHHHhhccCCEEEEEee
Q 026217          130 GGKM-LDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       130 g~~~-~~~~~~~l~~~G~~v~~g~  152 (241)
                      .... ....+..+++++.++.++.
T Consensus       222 p~~~i~~~~l~~mk~~~~lin~ar  245 (293)
T 3d4o_A          222 PALVVTANVLAEMPSHTFVIDLAS  245 (293)
T ss_dssp             SSCCBCHHHHHHSCTTCEEEECSS
T ss_pred             ChHHhCHHHHHhcCCCCEEEEecC
Confidence            7532 2456778899999998875

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=98.09  E-value=3.4e-05  Score=60.48  Aligned_cols=104  Identities=16%  Similarity=0.202  Sum_probs=66.3

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHH---HcCCCe---eecCCCchhHHHHHHHHCC--CC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK-VDLLKN---KFGFDE---AFNYKEEPDLDAALKRYFP--EG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~-~~~~~~---~~g~~~---~i~~~~~~~~~~~i~~~~~--~~  121 (241)
                      .+.++||+||+|++|.+.++.+...|++|+++++++++ .+.+.+   ..+...   ..|..+..++...+.+...  ++
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  125 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGS  125 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999987543 222221   334321   2244443233332322211  36


Q ss_pred             ccEEEeCCCc----h-----------------------hHHHHHHhhccCCEEEEEeeec
Q 026217          122 INIYFENVGG----K-----------------------MLDAVLLNMRIQGRITLCGMIS  154 (241)
Q Consensus       122 ~d~v~d~~g~----~-----------------------~~~~~~~~l~~~G~~v~~g~~~  154 (241)
                      +|++++++|.    .                       ..+.++..++.+|+++.+++..
T Consensus       126 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~  185 (291)
T 3ijr_A          126 LNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIV  185 (291)
T ss_dssp             CCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTH
T ss_pred             CCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechH
Confidence            9999998862    1                       0123344556688999887644

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=98.09  E-value=1.9e-05  Score=61.59  Aligned_cols=80  Identities=21%  Similarity=0.299  Sum_probs=55.0

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCCe---eecCCCchhHHHHHHHHCC--CCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEPDLDAALKRYFP--EGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---~i~~~~~~~~~~~i~~~~~--~~~  122 (241)
                      .+.++||+||++++|.++++.+...|++|+++++++++.+.+.+++   +...   ..|..+..++...+.+...  +++
T Consensus        23 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  102 (279)
T 3sju_A           23 RPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPI  102 (279)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            5689999999999999999999999999999999988766654343   3321   2344443233333332211  379


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |++++++|
T Consensus       103 d~lv~nAg  110 (279)
T 3sju_A          103 GILVNSAG  110 (279)
T ss_dssp             CEEEECCC
T ss_pred             cEEEECCC
Confidence            99999987

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=98.09  E-value=2.4e-05  Score=59.70  Aligned_cols=80  Identities=24%  Similarity=0.342  Sum_probs=56.3

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC---eeecCCCchhHHHHHHHHC--CCCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEPDLDAALKRYF--PEGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~~i~~~~~~~~~~~i~~~~--~~~~  122 (241)
                      .+.+++|+||+|++|...++.+...|++|+++++++++.+.+.+++   +..   ...|..+..++...+.+..  .+++
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAI   83 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999999999999999999999999999999988766554333   332   1234444323333333321  2379


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |++++++|
T Consensus        84 d~li~~Ag   91 (247)
T 3lyl_A           84 DILVNNAG   91 (247)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=98.08  E-value=1.9e-05  Score=61.67  Aligned_cols=80  Identities=13%  Similarity=0.185  Sum_probs=56.9

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC---CC---eeecCCCchhHHHHHHHHCC--CCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFG---FD---EAFNYKEEPDLDAALKRYFP--EGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g---~~---~~i~~~~~~~~~~~i~~~~~--~~~  122 (241)
                      ++.+++|+||++++|.+.++.+...|++|+++++++++.+.+.+++.   ..   ...|..+..++...+.+...  +++
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  106 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGHL  106 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            57899999999999999999999999999999999888776654542   21   12344443233333332211  379


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |++++++|
T Consensus       107 D~lVnnAg  114 (283)
T 3v8b_A          107 DIVVANAG  114 (283)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=98.08  E-value=3.9e-05  Score=58.02  Aligned_cols=79  Identities=14%  Similarity=0.286  Sum_probs=54.0

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----CCCe---eecCCCchhHHHHHHHHCC--CCc
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF----GFDE---AFNYKEEPDLDAALKRYFP--EGI  122 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~----g~~~---~i~~~~~~~~~~~i~~~~~--~~~  122 (241)
                      +.+++|+||+|++|.+.++.+...|++|++++++.++.+.+.+++    +...   ..|..+..++...+.+...  +++
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   81 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDV   81 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            578999999999999999999999999999999988766554332    3321   2244443122222211111  379


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |++++++|
T Consensus        82 d~li~~Ag   89 (235)
T 3l77_A           82 DVVVANAG   89 (235)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCc
Confidence            99999987

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=98.08  E-value=3.7e-05  Score=59.56  Aligned_cols=104  Identities=16%  Similarity=0.263  Sum_probs=67.4

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHH---HcCCCe---eecCCCchhHHHHHHHHCC--CC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS-KDKVDLLKN---KFGFDE---AFNYKEEPDLDAALKRYFP--EG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~-~~~~~~~~~---~~g~~~---~i~~~~~~~~~~~i~~~~~--~~  121 (241)
                      .+.+++|+||++++|.+.++.+...|++|++++++ .+..+.+.+   ..+...   ..|..+..++...+.+...  ++
T Consensus        17 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   96 (270)
T 3is3_A           17 DGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGH   96 (270)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999987654 444443332   334321   2344443233333332211  36


Q ss_pred             ccEEEeCCCch--------------------------hHHHHHHhhccCCEEEEEeeec
Q 026217          122 INIYFENVGGK--------------------------MLDAVLLNMRIQGRITLCGMIS  154 (241)
Q Consensus       122 ~d~v~d~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~  154 (241)
                      +|++++++|..                          ..+.++..+.++|+++.++...
T Consensus        97 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~  155 (270)
T 3is3_A           97 LDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNT  155 (270)
T ss_dssp             CCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTT
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCch
Confidence            99999998731                          0234455666789999998754

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=98.08  E-value=1.2e-05  Score=62.04  Aligned_cols=80  Identities=21%  Similarity=0.287  Sum_probs=55.8

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---C-CC-e--eecCCCchhHHHHHHHHCC--CC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---G-FD-E--AFNYKEEPDLDAALKRYFP--EG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g-~~-~--~i~~~~~~~~~~~i~~~~~--~~  121 (241)
                      .+.+++|+||++++|.+.++.+...|++|+++++++++.+.+.+++   + .. .  ..|..+..++...+.+...  ++
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   88 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGG   88 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            5789999999999999999999999999999999988766554333   2 11 1  2344443233332222211  36


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|++++++|
T Consensus        89 id~lvnnAg   97 (262)
T 3pk0_A           89 IDVVCANAG   97 (262)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=98.08  E-value=1.3e-05  Score=61.77  Aligned_cols=80  Identities=14%  Similarity=0.120  Sum_probs=56.7

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe---eecCCCchhHHHHHHHHCC--CCccEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGINIY  125 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~---~i~~~~~~~~~~~i~~~~~--~~~d~v  125 (241)
                      .+.+++|+||+|++|..+++.+...|++|+++++++++.+.+.++++...   ..|..+..++.+.+.+...  +++|++
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   90 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVA   90 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            46799999999999999999999999999999998877666654665421   2344443233333332211  369999


Q ss_pred             EeCCC
Q 026217          126 FENVG  130 (241)
Q Consensus       126 ~d~~g  130 (241)
                      ++++|
T Consensus        91 i~~Ag   95 (265)
T 2o23_A           91 VNCAG   95 (265)
T ss_dssp             EECCC
T ss_pred             EECCc
Confidence            99987

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=98.08  E-value=5.1e-05  Score=59.20  Aligned_cols=104  Identities=13%  Similarity=0.135  Sum_probs=66.7

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC------------HHHHHHHHH---HcCCCe---eecCCCchhHHH
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS------------KDKVDLLKN---KFGFDE---AFNYKEEPDLDA  112 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~------------~~~~~~~~~---~~g~~~---~i~~~~~~~~~~  112 (241)
                      .+.++||+||++++|.++++.+...|++|++++++            .++.+.+.+   ..+...   ..|..+..++..
T Consensus         9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   88 (287)
T 3pxx_A            9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSR   88 (287)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence            57899999999999999999999999999999876            444443331   233321   234444323333


Q ss_pred             HHHHHCC--CCccEEEeCCCch---------h---------------HHHHHHhhccCCEEEEEeeec
Q 026217          113 ALKRYFP--EGINIYFENVGGK---------M---------------LDAVLLNMRIQGRITLCGMIS  154 (241)
Q Consensus       113 ~i~~~~~--~~~d~v~d~~g~~---------~---------------~~~~~~~l~~~G~~v~~g~~~  154 (241)
                      .+.+...  +++|++++++|..         .               .+.++..+..+|+++.++...
T Consensus        89 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~  156 (287)
T 3pxx_A           89 ELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVA  156 (287)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHH
T ss_pred             HHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccch
Confidence            3332211  3699999998731         1               122333455678999887643

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=98.07  E-value=2.2e-05  Score=60.92  Aligned_cols=80  Identities=18%  Similarity=0.306  Sum_probs=56.2

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC---eeecCCCchhHH---HHHHHHCCCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEPDLD---AALKRYFPEG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~~i~~~~~~~~~---~~i~~~~~~~  121 (241)
                      .+.+++|+||+|++|.+.++.+...|++|+++++++++.+.+.+++   +..   ...|..+..++.   +.+.+..+++
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   99 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK   99 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999999999999999999987765543232   332   123444431222   3333333357


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|++++++|
T Consensus       100 id~lv~nAg  108 (273)
T 1ae1_A          100 LNILVNNAG  108 (273)
T ss_dssp             CCEEEECCC
T ss_pred             CcEEEECCC
Confidence            999999987

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=98.07  E-value=3.9e-05  Score=57.43  Aligned_cols=92  Identities=12%  Similarity=-0.001  Sum_probs=64.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe-eecCCCchhHHHHHHHHCCCCccEEEeCCCch
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFENVGGK  132 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~  132 (241)
                      +|+|+||+|.+|...++.+...|.+|+++++++++.+.+. .-+... ..|..+. +. +.+     +++|+||+++|..
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~~~~~~D~~d~-~~-~~~-----~~~d~vi~~ag~~   73 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL-GATVATLVKEPLVL-TE-ADL-----DSVDAVVDALSVP   73 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT-CTTSEEEECCGGGC-CH-HHH-----TTCSEEEECCCCC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc-CCCceEEecccccc-cH-hhc-----ccCCEEEECCccC
Confidence            5899999999999999999999999999999988877654 333322 2244333 22 222     2699999999751


Q ss_pred             -----------hHHHHHHhhcc-CCEEEEEeee
Q 026217          133 -----------MLDAVLLNMRI-QGRITLCGMI  153 (241)
Q Consensus       133 -----------~~~~~~~~l~~-~G~~v~~g~~  153 (241)
                                 ....+++.++. +++++.++..
T Consensus        74 ~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~  106 (224)
T 3h2s_A           74 WGSGRGYLHLDFATHLVSLLRNSDTLAVFILGS  106 (224)
T ss_dssp             TTSSCTHHHHHHHHHHHHTCTTCCCEEEEECCG
T ss_pred             CCcchhhHHHHHHHHHHHHHHHcCCcEEEEecc
Confidence                       23445555544 5788888754

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=98.07  E-value=1.4e-05  Score=62.32  Aligned_cols=80  Identities=21%  Similarity=0.290  Sum_probs=56.5

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC---CC-e--eecCCCchhHHHHHHHHCC--CCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFG---FD-E--AFNYKEEPDLDAALKRYFP--EGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g---~~-~--~i~~~~~~~~~~~i~~~~~--~~~  122 (241)
                      .+.+++|+||++++|.+.++.+...|++|+++++++++.+.+.+++.   .. .  ..|..+..++...+.....  +++
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   86 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGL   86 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            57899999999999999999999999999999999888776664542   21 1  2244443122222222211  369


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |++++++|
T Consensus        87 D~lvnnAg   94 (280)
T 3tox_A           87 DTAFNNAG   94 (280)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=98.07  E-value=2.2e-05  Score=60.15  Aligned_cols=81  Identities=17%  Similarity=0.228  Sum_probs=56.3

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC---eeecCCCchhHHHHHHHHCC--CCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEPDLDAALKRYFP--EGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~~i~~~~~~~~~~~i~~~~~--~~~  122 (241)
                      .+.+++|+||++++|.+.++.+...|++|+++++++++.+.+.+++   +..   ...|..+..++...+.+...  +++
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   87 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGI   87 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999999999999999999999999999999988776665343   321   12344443123322222211  369


Q ss_pred             cEEEeCCCc
Q 026217          123 NIYFENVGG  131 (241)
Q Consensus       123 d~v~d~~g~  131 (241)
                      |++++++|.
T Consensus        88 d~li~~Ag~   96 (253)
T 3qiv_A           88 DYLVNNAAI   96 (253)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCc
Confidence            999999873

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=98.06  E-value=1.4e-05  Score=61.26  Aligned_cols=78  Identities=18%  Similarity=0.203  Sum_probs=56.4

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC---eeecCCCchh---HHHHHHHHCCCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEPD---LDAALKRYFPEG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~~i~~~~~~~---~~~~i~~~~~~~  121 (241)
                      .+.+++|+||++++|.+.++.+...|++|+++++++++.+.+.+++   +..   ...|..+..+   +.+.+.+.  ++
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~--g~   83 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH--AP   83 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH--SC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh--CC
Confidence            5688999999999999999999999999999999988766554333   332   1234444312   33334333  57


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|++++++|
T Consensus        84 id~lv~nAg   92 (252)
T 3h7a_A           84 LEVTIFNVG   92 (252)
T ss_dssp             EEEEEECCC
T ss_pred             ceEEEECCC
Confidence            999999998

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=98.06  E-value=2.2e-05  Score=60.46  Aligned_cols=80  Identities=16%  Similarity=0.292  Sum_probs=55.9

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC---eeecCCCchhHHH---HHHHHCCCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEPDLDA---ALKRYFPEG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~~i~~~~~~~~~~---~i~~~~~~~  121 (241)
                      .+.+++|+||+|++|.+.++.+...|++|+++++++++.+.+.+++   +..   ...|..+..++..   .+.+..+++
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   87 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK   87 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999999999999999999999999999999987765544233   322   1234444312322   233333257


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|++++++|
T Consensus        88 id~lv~~Ag   96 (260)
T 2ae2_A           88 LNILVNNAG   96 (260)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=98.06  E-value=3.8e-05  Score=59.29  Aligned_cols=80  Identities=5%  Similarity=0.077  Sum_probs=52.6

Q ss_pred             CCcEEEEEcCCch--HHHHHHHHHHHcCCEEEEEeCCHHHHHHHH---HHcCCC----eeecCCCchhHHHHHHHHCC--
Q 026217           51 QGEYVFVSAASGA--VGQLVGQFAKLVGCYVVGSAGSKDKVDLLK---NKFGFD----EAFNYKEEPDLDAALKRYFP--  119 (241)
Q Consensus        51 ~~~~vlI~ga~g~--~G~~avqla~~~g~~v~~~~~~~~~~~~~~---~~~g~~----~~i~~~~~~~~~~~i~~~~~--  119 (241)
                      .+.+++|+||+|+  +|.+.++.+...|++|++++++++..+.+.   ++++..    ...|..+..++...+.+...  
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   85 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQV   85 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence            4679999999954  999999999999999999998865443333   133331    12344444233333333221  


Q ss_pred             CCccEEEeCCC
Q 026217          120 EGINIYFENVG  130 (241)
Q Consensus       120 ~~~d~v~d~~g  130 (241)
                      +++|++++++|
T Consensus        86 g~id~li~~Ag   96 (266)
T 3oig_A           86 GVIHGIAHCIA   96 (266)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCeeEEEEccc
Confidence            36999999987

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=98.06  E-value=2.8e-05  Score=59.85  Aligned_cols=80  Identities=16%  Similarity=0.175  Sum_probs=51.8

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHH---HcCCC-e--eecCCCchhHHHHHHHHCC--CC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGS-AGSKDKVDLLKN---KFGFD-E--AFNYKEEPDLDAALKRYFP--EG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~-~~~~~~~~~~~~---~~g~~-~--~i~~~~~~~~~~~i~~~~~--~~  121 (241)
                      .+.+++|+||++++|.++++.+...|++|+++ .++++..+.+.+   ..+.. .  ..|..+..++...+.+...  ++
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   86 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGE   86 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            57899999999999999999999999999998 444444433322   23432 1  2344443233333332211  37


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|++++++|
T Consensus        87 id~lv~nAg   95 (259)
T 3edm_A           87 IHGLVHVAG   95 (259)
T ss_dssp             EEEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999886

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=98.06  E-value=6.7e-05  Score=56.97  Aligned_cols=78  Identities=15%  Similarity=0.201  Sum_probs=54.9

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc-CCCe-eecCCCchhHHHHHHHHCCCCccEEEeC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF-GFDE-AFNYKEEPDLDAALKRYFPEGINIYFEN  128 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~-g~~~-~i~~~~~~~~~~~i~~~~~~~~d~v~d~  128 (241)
                      ++.+++|+||+|++|...++.+...|++|+++++++++.+.+.++. +... ..|..+..++.+.+.  .-+++|+++++
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~~~id~vi~~   83 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALG--GIGPVDLLVNN   83 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHT--TCCCCSEEEEC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHH--HcCCCCEEEEC
Confidence            4678999999999999999999999999999999988776665343 2221 234444312222222  11369999999


Q ss_pred             CC
Q 026217          129 VG  130 (241)
Q Consensus       129 ~g  130 (241)
                      +|
T Consensus        84 Ag   85 (244)
T 1cyd_A           84 AA   85 (244)
T ss_dssp             CC
T ss_pred             Cc
Confidence            88

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=98.05  E-value=2.7e-05  Score=60.06  Aligned_cols=80  Identities=15%  Similarity=0.258  Sum_probs=55.5

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC-e--eecCCCchhHHHHHHHHCC--CCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYFP--EGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~--~i~~~~~~~~~~~i~~~~~--~~~  122 (241)
                      .+.+++|+||+|++|.+.++.+...|++|+++++++++.+.+.+++   |.. .  ..|..+..++...+.+...  +++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   85 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI   85 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            4678999999999999999999999999999999987766554333   322 1  2344443233322222211  369


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |++++++|
T Consensus        86 d~lv~nAg   93 (262)
T 1zem_A           86 DFLFNNAG   93 (262)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999887

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=98.05  E-value=2e-05  Score=60.76  Aligned_cols=81  Identities=19%  Similarity=0.273  Sum_probs=56.5

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC---eeecCCCchhHHHHHHHHCC--CCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEPDLDAALKRYFP--EGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~~i~~~~~~~~~~~i~~~~~--~~~  122 (241)
                      .+.++||+||+|++|...++.+...|++|+++++++++.+.+.+++   +..   ...|..+..++...+.....  +++
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i  107 (262)
T 3rkr_A           28 SGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGRC  107 (262)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            5789999999999999999999899999999999988766654333   322   12344443233333322211  369


Q ss_pred             cEEEeCCCc
Q 026217          123 NIYFENVGG  131 (241)
Q Consensus       123 d~v~d~~g~  131 (241)
                      |++++++|.
T Consensus       108 d~lv~~Ag~  116 (262)
T 3rkr_A          108 DVLVNNAGV  116 (262)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCc
Confidence            999999874

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=98.05  E-value=2.6e-05  Score=59.81  Aligned_cols=80  Identities=14%  Similarity=0.179  Sum_probs=55.0

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----C--CC-eeecC--CCchhHHHHHHHHC--C
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF----G--FD-EAFNY--KEEPDLDAALKRYF--P  119 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~----g--~~-~~i~~--~~~~~~~~~i~~~~--~  119 (241)
                      .+.+++|+||++++|.+.++.+...|++|+++++++++.+.+.+++    +  .. ...|.  .+..++...+.+..  -
T Consensus        11 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   90 (252)
T 3f1l_A           11 NDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNY   90 (252)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHhC
Confidence            5789999999999999999999999999999999988766554332    2  11 12333  33312322222221  1


Q ss_pred             CCccEEEeCCC
Q 026217          120 EGINIYFENVG  130 (241)
Q Consensus       120 ~~~d~v~d~~g  130 (241)
                      +++|++++++|
T Consensus        91 g~id~lv~nAg  101 (252)
T 3f1l_A           91 PRLDGVLHNAG  101 (252)
T ss_dssp             SCCSEEEECCC
T ss_pred             CCCCEEEECCc
Confidence            37999999987

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=98.05  E-value=1.4e-05  Score=62.79  Aligned_cols=80  Identities=14%  Similarity=0.238  Sum_probs=56.2

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC---Ce----eecCCCchhHHHHHHHHCC--CC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF---DE----AFNYKEEPDLDAALKRYFP--EG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~---~~----~i~~~~~~~~~~~i~~~~~--~~  121 (241)
                      .+.+++|+||+|++|.+.++.+...|++|+++++++++.+.+.+++..   ..    ..|..+..++...+.+...  ++
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  119 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGA  119 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999999999999999999998876665544422   11    2344443233332322211  36


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|++++++|
T Consensus       120 iD~lvnnAg  128 (293)
T 3rih_A          120 LDVVCANAG  128 (293)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=98.04  E-value=1.9e-05  Score=61.54  Aligned_cols=81  Identities=16%  Similarity=0.164  Sum_probs=56.0

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CC---C-e--eecCCCchhHHHHHHHHCC--
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GF---D-E--AFNYKEEPDLDAALKRYFP--  119 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~---~-~--~i~~~~~~~~~~~i~~~~~--  119 (241)
                      .+.+++|+||+|++|.+.++.+...|++|+++++++++.+.+.+++   +.   . .  ..|..+..++...+.+...  
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   89 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWH   89 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            4689999999999999999999999999999999988765554333   22   1 1  2344443233333332211  


Q ss_pred             CCccEEEeCCCc
Q 026217          120 EGINIYFENVGG  131 (241)
Q Consensus       120 ~~~d~v~d~~g~  131 (241)
                      +++|++++++|.
T Consensus        90 g~id~lv~nAg~  101 (281)
T 3svt_A           90 GRLHGVVHCAGG  101 (281)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            369999999883

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=98.04  E-value=2.8e-05  Score=60.03  Aligned_cols=81  Identities=11%  Similarity=0.174  Sum_probs=56.8

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC---eeecCCCchhHHHHHHHHC--CCC
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEPDLDAALKRYF--PEG  121 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~~i~~~~~~~~~~~i~~~~--~~~  121 (241)
                      -.+.+++|+||++++|.+.++.+...|++|+++++++++.+.+.+++   +..   ...|..+..++...+.+..  -++
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   88 (264)
T 3ucx_A            9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGR   88 (264)
T ss_dssp             TTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            35789999999999999999999999999999999988776655333   322   1235555423333332221  137


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|++++++|
T Consensus        89 id~lv~nAg   97 (264)
T 3ucx_A           89 VDVVINNAF   97 (264)
T ss_dssp             CSEEEECCC
T ss_pred             CcEEEECCC
Confidence            999999986

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=98.04  E-value=2.5e-05  Score=60.80  Aligned_cols=80  Identities=18%  Similarity=0.225  Sum_probs=55.5

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC--C-e--eecCCCchhHHHHHHHHC--CCCcc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF--D-E--AFNYKEEPDLDAALKRYF--PEGIN  123 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~--~-~--~i~~~~~~~~~~~i~~~~--~~~~d  123 (241)
                      .+.+++|+||+|++|.++++.+...|++|+++++++++.+.+.+++..  . .  ..|..+..++...+.+..  -+++|
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  107 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARLD  107 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCCS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            467899999999999999999999999999999998876655434421  1 1  124444312332222221  13799


Q ss_pred             EEEeCCC
Q 026217          124 IYFENVG  130 (241)
Q Consensus       124 ~v~d~~g  130 (241)
                      ++++++|
T Consensus       108 ~lvnnAg  114 (276)
T 2b4q_A          108 ILVNNAG  114 (276)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999987

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=98.04  E-value=1.2e-05  Score=64.01  Aligned_cols=80  Identities=19%  Similarity=0.224  Sum_probs=56.3

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CC--C---eeecCCCchhHHHHHHHHC--CC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GF--D---EAFNYKEEPDLDAALKRYF--PE  120 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~--~---~~i~~~~~~~~~~~i~~~~--~~  120 (241)
                      .+.++||+||+|++|...++.+...|++|+++++++++.+.+.+++   +.  .   ...|..+..++...+....  -+
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   86 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFG   86 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCC
Confidence            4679999999999999999999999999999999988776654333   22  1   1235444423333333221  13


Q ss_pred             CccEEEeCCC
Q 026217          121 GINIYFENVG  130 (241)
Q Consensus       121 ~~d~v~d~~g  130 (241)
                      ++|++++++|
T Consensus        87 ~id~lv~nAg   96 (319)
T 3ioy_A           87 PVSILCNNAG   96 (319)
T ss_dssp             CEEEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999998

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=98.04  E-value=2.2e-05  Score=60.73  Aligned_cols=80  Identities=11%  Similarity=0.235  Sum_probs=54.9

Q ss_pred             CCcEEEEEcC--CchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHHHcCCC---eeecCCCchhHHHH---HHHHCC--
Q 026217           51 QGEYVFVSAA--SGAVGQLVGQFAKLVGCYVVGSAGSKDK-VDLLKNKFGFD---EAFNYKEEPDLDAA---LKRYFP--  119 (241)
Q Consensus        51 ~~~~vlI~ga--~g~~G~~avqla~~~g~~v~~~~~~~~~-~~~~~~~~g~~---~~i~~~~~~~~~~~---i~~~~~--  119 (241)
                      .+.+++|+||  ++++|.+.++.+...|++|+++++++++ .+.+.++++..   ...|..+..++...   +.+..+  
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   85 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG   85 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            4688999998  8999999999999999999999988765 35555355432   12355443223222   222222  


Q ss_pred             CCccEEEeCCC
Q 026217          120 EGINIYFENVG  130 (241)
Q Consensus       120 ~~~d~v~d~~g  130 (241)
                      +++|++++++|
T Consensus        86 ~~iD~lv~nAg   96 (269)
T 2h7i_A           86 NKLDGVVHSIG   96 (269)
T ss_dssp             CCEEEEEECCC
T ss_pred             CCceEEEECCc
Confidence            16999999987

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=98.03  E-value=1.8e-05  Score=61.44  Aligned_cols=80  Identities=19%  Similarity=0.355  Sum_probs=55.9

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCC---eeecCCCchhHHHHHHHHCC--CCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFD---EAFNYKEEPDLDAALKRYFP--EGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~---~g~~---~~i~~~~~~~~~~~i~~~~~--~~~  122 (241)
                      .+.+++|+||++++|.+.++.+...|++|+++++++++.+.+.++   .+..   ...|..+..++...+.+...  +++
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  106 (270)
T 3ftp_A           27 DKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGAL  106 (270)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            578999999999999999999999999999999998876655423   2322   12355543233333332211  369


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |++++++|
T Consensus       107 D~lvnnAg  114 (270)
T 3ftp_A          107 NVLVNNAG  114 (270)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999997

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=98.03  E-value=2.9e-05  Score=58.70  Aligned_cols=79  Identities=18%  Similarity=0.188  Sum_probs=55.7

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe--eecCCCchhHHHHHHHHCC--CCccEEEe
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFP--EGINIYFE  127 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~--~i~~~~~~~~~~~i~~~~~--~~~d~v~d  127 (241)
                      +.+++|+||+|++|...++.+...|++|+++++++++.+.+.++++...  ..|..+..++.+.+.....  +++|++++
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~   84 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALVN   84 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            5689999999999999999999999999999999888776664553212  2344443233333322211  36999999


Q ss_pred             CCC
Q 026217          128 NVG  130 (241)
Q Consensus       128 ~~g  130 (241)
                      ++|
T Consensus        85 ~Ag   87 (234)
T 2ehd_A           85 NAG   87 (234)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            987

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=98.03  E-value=1.3e-05  Score=60.24  Aligned_cols=89  Identities=10%  Similarity=0.088  Sum_probs=61.1

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      .+.+++|+||++++|.+.++.+...|++|++++++++              .|..+..++...+.+.  +++|++++++|
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------------~D~~~~~~v~~~~~~~--g~id~lv~nAg   68 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG--------------LDISDEKSVYHYFETI--GAFDHLIVTAG   68 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT--------------CCTTCHHHHHHHHHHH--CSEEEEEECCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc--------------cCCCCHHHHHHHHHHh--CCCCEEEECCC
Confidence            4678999999999999999988888999999987643              2333331333333333  46999999887


Q ss_pred             ch---------------------------hHHHHHHhhccCCEEEEEeeecc
Q 026217          131 GK---------------------------MLDAVLLNMRIQGRITLCGMISQ  155 (241)
Q Consensus       131 ~~---------------------------~~~~~~~~l~~~G~~v~~g~~~~  155 (241)
                      ..                           ..+.+.+.++++|+++.++....
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~  120 (223)
T 3uce_A           69 SYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLS  120 (223)
T ss_dssp             CCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGG
T ss_pred             CCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhh
Confidence            21                           01223344556789999887554

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=98.03  E-value=1.4e-05  Score=61.51  Aligned_cols=80  Identities=18%  Similarity=0.260  Sum_probs=55.7

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCCe---eecCCCchhHHHHHHHHCC--CCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEPDLDAALKRYFP--EGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---~i~~~~~~~~~~~i~~~~~--~~~  122 (241)
                      .+.+++|+||++++|.+.++.+...|++|+++++++++.+.+.+++   +...   ..|..+..++...+.+...  +++
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   90 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKI   90 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999998899999999999988766554333   3321   2344443233322322211  369


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |++++++|
T Consensus        91 d~lv~nAg   98 (256)
T 3gaf_A           91 TVLVNNAG   98 (256)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=98.03  E-value=1.9e-05  Score=61.39  Aligned_cols=80  Identities=20%  Similarity=0.288  Sum_probs=55.8

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC-e--eecCCCchhHHHHHHHHCC--CCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYFP--EGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~--~i~~~~~~~~~~~i~~~~~--~~~  122 (241)
                      .+.+++|+||++++|.+.++.+...|++|+++++++++.+.+.+++   +.. .  ..|..+..++...+.+...  +++
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i  110 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGI  110 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999999999999999887765554333   322 1  2344443233333332211  369


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |++++++|
T Consensus       111 D~lvnnAg  118 (276)
T 3r1i_A          111 DIAVCNAG  118 (276)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.03  E-value=3.8e-05  Score=63.81  Aligned_cols=101  Identities=15%  Similarity=0.190  Sum_probs=74.3

Q ss_pred             HHHHHHHHhcCC-CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHH
Q 026217           38 TAYAGFFEVCSP-KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKR  116 (241)
Q Consensus        38 ta~~~l~~~~~~-~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~  116 (241)
                      ..+.++.+..+. -.|.+++|+|+ |++|+..++.++..|++|+++++++.+...+. ..|.+ +.+..   +   .+  
T Consensus       250 sl~dgi~r~tg~~L~GKtVvVtGa-GgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa-~~g~d-v~~le---e---~~--  318 (488)
T 3ond_A          250 SLPDGLMRATDVMIAGKVAVVAGY-GDVGKGCAAALKQAGARVIVTEIDPICALQAT-MEGLQ-VLTLE---D---VV--  318 (488)
T ss_dssp             HHHHHHHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCE-ECCGG---G---TT--
T ss_pred             HHHHHHHHHcCCcccCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-HhCCc-cCCHH---H---HH--
Confidence            344455454443 47999999997 79999999999999999999999988877777 66653 21111   1   11  


Q ss_pred             HCCCCccEEEeCCCc-hhH-HHHHHhhccCCEEEEEee
Q 026217          117 YFPEGINIYFENVGG-KML-DAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       117 ~~~~~~d~v~d~~g~-~~~-~~~~~~l~~~G~~v~~g~  152 (241)
                         ..+|+++++.|. ..+ ...+..+++++.++.+|.
T Consensus       319 ---~~aDvVi~atG~~~vl~~e~l~~mk~gaiVvNaG~  353 (488)
T 3ond_A          319 ---SEADIFVTTTGNKDIIMLDHMKKMKNNAIVCNIGH  353 (488)
T ss_dssp             ---TTCSEEEECSSCSCSBCHHHHTTSCTTEEEEESSS
T ss_pred             ---HhcCEEEeCCCChhhhhHHHHHhcCCCeEEEEcCC
Confidence               259999999996 333 447888999999888875

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=98.03  E-value=2.7e-05  Score=60.60  Aligned_cols=80  Identities=18%  Similarity=0.286  Sum_probs=55.7

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----CCCe---eecCCCchhHHHHHHHHCC--CC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF----GFDE---AFNYKEEPDLDAALKRYFP--EG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~----g~~~---~i~~~~~~~~~~~i~~~~~--~~  121 (241)
                      .+.+++|+||++++|.+.++.+...|++|++++++.++.+.+.+++    +...   ..|..+..++...+.+...  ++
T Consensus        26 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  105 (277)
T 4fc7_A           26 RDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFGR  105 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999999999987655443233    4321   2344443233333332211  37


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|++++++|
T Consensus       106 id~lv~nAg  114 (277)
T 4fc7_A          106 IDILINCAA  114 (277)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCc
Confidence            999999997

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=98.03  E-value=2.6e-05  Score=59.48  Aligned_cols=80  Identities=20%  Similarity=0.309  Sum_probs=54.3

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHc---CCC---eeecCCCchhHHHHHHHHCC--CC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKDKVDLLKNKF---GFD---EAFNYKEEPDLDAALKRYFP--EG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~-~~~~~~~~~~~~---g~~---~~i~~~~~~~~~~~i~~~~~--~~  121 (241)
                      .+.+++|+||+|++|.+.++.+...|++|+++++ ++++.+.+.+++   +..   ...|..+..++...+.+...  ++
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQ   82 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999999999999999999999999999998 766655443232   432   12344443233333332211  36


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|++++++|
T Consensus        83 id~lv~nAg   91 (246)
T 2uvd_A           83 VDILVNNAG   91 (246)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=98.03  E-value=2.8e-05  Score=59.24  Aligned_cols=77  Identities=18%  Similarity=0.049  Sum_probs=56.0

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEE-e--CCHHHHHHHHHHc-CCCeeecCCCchhHHHHHHHHCCCCccEEEe
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGS-A--GSKDKVDLLKNKF-GFDEAFNYKEEPDLDAALKRYFPEGINIYFE  127 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~-~--~~~~~~~~~~~~~-g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d  127 (241)
                      +.+++|+||+|++|.+.++.+...|++|+++ +  +++++.+.+.+++ +. .+.+..+-..+.+.+.+.. +++|++++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~-g~iD~lv~   78 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGT-IALAEQKPERLVDATLQHG-EAIDTIVS   78 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHSTTE-EECCCCCGGGHHHHHGGGS-SCEEEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHhCCC-cccCHHHHHHHHHHHHHHc-CCCCEEEE
Confidence            3579999999999999999999999999999 6  8888877766455 32 2334333213444444433 36999999


Q ss_pred             CCC
Q 026217          128 NVG  130 (241)
Q Consensus       128 ~~g  130 (241)
                      ++|
T Consensus        79 ~Ag   81 (244)
T 1zmo_A           79 NDY   81 (244)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            987

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=98.03  E-value=1.2e-05  Score=62.30  Aligned_cols=80  Identities=20%  Similarity=0.340  Sum_probs=56.0

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----cCCC---eeecCCCchhHHHHHHHHCC--CC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK----FGFD---EAFNYKEEPDLDAALKRYFP--EG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~----~g~~---~~i~~~~~~~~~~~i~~~~~--~~  121 (241)
                      .+.+++|+||++++|.+.++.+...|++|+++++++++.+.+.++    .+..   ...|..+..++...+.+...  ++
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   98 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGG   98 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999999999999999999998876655433    3432   12344443133333332211  37


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|++++++|
T Consensus        99 id~lv~nAg  107 (266)
T 4egf_A           99 LDVLVNNAG  107 (266)
T ss_dssp             CSEEEEECC
T ss_pred             CCEEEECCC
Confidence            999999987

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=98.03  E-value=3.1e-05  Score=59.43  Aligned_cols=79  Identities=14%  Similarity=0.171  Sum_probs=54.5

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC-e--eecCCCchhHHHHHHHHC--CCCcc
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYF--PEGIN  123 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~--~i~~~~~~~~~~~i~~~~--~~~~d  123 (241)
                      +.+++|+||+|++|.+.++.+...|++|+++++++++.+.+.+++   +.. .  ..|..+..++.+.+.+..  -+++|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   81 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            468999999999999999999999999999999987765544233   322 1  234444323333332221  13799


Q ss_pred             EEEeCCC
Q 026217          124 IYFENVG  130 (241)
Q Consensus       124 ~v~d~~g  130 (241)
                      ++++++|
T Consensus        82 ~lv~nAg   88 (256)
T 1geg_A           82 VIVNNAG   88 (256)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999987

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=98.02  E-value=2e-05  Score=60.85  Aligned_cols=80  Identities=14%  Similarity=0.099  Sum_probs=55.7

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----cCCC--e--eecCCCchhHHHHHHHHCC--C
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK----FGFD--E--AFNYKEEPDLDAALKRYFP--E  120 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~----~g~~--~--~i~~~~~~~~~~~i~~~~~--~  120 (241)
                      .+.+++|+||++++|.+.++.+...|++|+++++++++.+.+.++    .+..  .  ..|..+..++...+.+...  +
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   86 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLG   86 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            468999999999999999999999999999999998876655433    3222  1  2344443223222222211  3


Q ss_pred             CccEEEeCCC
Q 026217          121 GINIYFENVG  130 (241)
Q Consensus       121 ~~d~v~d~~g  130 (241)
                      ++|++++++|
T Consensus        87 ~id~lvnnAg   96 (265)
T 3lf2_A           87 CASILVNNAG   96 (265)
T ss_dssp             SCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999997

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=98.02  E-value=6.9e-05  Score=58.80  Aligned_cols=106  Identities=10%  Similarity=0.062  Sum_probs=68.1

Q ss_pred             CCCcEEEEEcCCch--HHHHHHHHHHHcCCEEEEEeCCHHHHHHHH---HHcCCCe--eecCCCchhHHHHHHHHC--CC
Q 026217           50 KQGEYVFVSAASGA--VGQLVGQFAKLVGCYVVGSAGSKDKVDLLK---NKFGFDE--AFNYKEEPDLDAALKRYF--PE  120 (241)
Q Consensus        50 ~~~~~vlI~ga~g~--~G~~avqla~~~g~~v~~~~~~~~~~~~~~---~~~g~~~--~i~~~~~~~~~~~i~~~~--~~  120 (241)
                      -.+.+++|+||+|+  +|.+.++.+...|++|++++++++..+.++   ++.+...  ..|..+..++...+.+..  -+
T Consensus        29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  108 (293)
T 3grk_A           29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWG  108 (293)
T ss_dssp             TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence            36789999999855  999999999999999999998865433332   1334222  234444323333332221  13


Q ss_pred             CccEEEeCCCch------------------------------hHHHHHHhhccCCEEEEEeeecc
Q 026217          121 GINIYFENVGGK------------------------------MLDAVLLNMRIQGRITLCGMISQ  155 (241)
Q Consensus       121 ~~d~v~d~~g~~------------------------------~~~~~~~~l~~~G~~v~~g~~~~  155 (241)
                      ++|++++++|..                              ..+.++..+..+|+++.++....
T Consensus       109 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~  173 (293)
T 3grk_A          109 KLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGA  173 (293)
T ss_dssp             CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGG
T ss_pred             CCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhh
Confidence            799999998821                              01234445566899999987554

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=98.02  E-value=2.9e-05  Score=59.35  Aligned_cols=79  Identities=11%  Similarity=0.228  Sum_probs=54.6

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHH-HHHHHcCCCe---eecCCCchhHHHHHHHHCC--CCcc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK-DKVD-LLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGIN  123 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~-~~~~-~~~~~~g~~~---~i~~~~~~~~~~~i~~~~~--~~~d  123 (241)
                      .+.+++|+||+|++|.+.++.+...|++|+++++++ ++.+ .++ +.+...   ..|..+..++...+.+...  +++|
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   84 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIR-NLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD   84 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHH-HTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHH-hcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence            467899999999999999999999999999999887 5544 344 555321   2344443233333322211  3699


Q ss_pred             EEEeCCC
Q 026217          124 IYFENVG  130 (241)
Q Consensus       124 ~v~d~~g  130 (241)
                      ++++++|
T Consensus        85 ~lv~nAg   91 (249)
T 2ew8_A           85 ILVNNAG   91 (249)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999987

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=98.02  E-value=3.3e-05  Score=59.85  Aligned_cols=80  Identities=19%  Similarity=0.233  Sum_probs=55.6

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC-e--eecCCCchhHHHHHHHHC--CCCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYF--PEGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~--~i~~~~~~~~~~~i~~~~--~~~~  122 (241)
                      .+.+++|+||+|++|...++.+...|++|+++++++++.+.+.+++   +.. .  ..|..+..++...+.+..  -+++
T Consensus        30 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  109 (272)
T 1yb1_A           30 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDV  109 (272)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence            4679999999999999999999999999999999987766554232   332 1  234444313333332221  1369


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |++++++|
T Consensus       110 D~li~~Ag  117 (272)
T 1yb1_A          110 SILVNNAG  117 (272)
T ss_dssp             SEEEECCC
T ss_pred             cEEEECCC
Confidence            99999997

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=98.02  E-value=3.5e-05  Score=59.16  Aligned_cols=80  Identities=11%  Similarity=0.175  Sum_probs=54.8

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC-e--eecCCCchhHHHHHHHHCC--CCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYFP--EGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~--~i~~~~~~~~~~~i~~~~~--~~~  122 (241)
                      .+.+++|+||+|++|...++.+...|++|+++++++++.+.+.+++   +.. .  ..|..+..++...+.+...  +++
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   91 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRV   91 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999999999999999999999999999999887655443232   332 1  2344443233333332211  369


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |++++++|
T Consensus        92 d~vi~~Ag   99 (260)
T 3awd_A           92 DILVACAG   99 (260)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=98.02  E-value=2e-05  Score=61.16  Aligned_cols=80  Identities=21%  Similarity=0.364  Sum_probs=56.1

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCCe---eecCCCchhHHHHHHHHC--CCCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEPDLDAALKRYF--PEGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---~i~~~~~~~~~~~i~~~~--~~~~  122 (241)
                      .|.+++|+||++++|.+.++.+...|++|+++++++++.+.+.+++   |...   ..|..+..++...+.+..  .+++
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  104 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDV  104 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence            5789999999999999999999999999999999988766554343   3321   234444323333232221  2379


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |++++++|
T Consensus       105 D~lv~nAg  112 (271)
T 4ibo_A          105 DILVNNAG  112 (271)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999988

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=98.01  E-value=6.2e-06  Score=62.66  Aligned_cols=103  Identities=16%  Similarity=0.193  Sum_probs=69.5

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC-CeeecCCCchhHHHHHHHHCCCCccEEEeC
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF-DEAFNYKEEPDLDAALKRYFPEGINIYFEN  128 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~-~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~  128 (241)
                      =.|.+++|+||++++|++.++.+...|++|+++++++++.+... .-.. ....|..++.++.+.+.+ . +++|+++++
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~-~-g~iDiLVNN   85 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPR-HPRIRREELDITDSQRLQRLFEA-L-PRLDVLVNN   85 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCC-CTTEEEEECCTTCHHHHHHHHHH-C-SCCSEEEEC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhh-cCCeEEEEecCCCHHHHHHHHHh-c-CCCCEEEEC
Confidence            36899999999999999999999999999999999876654332 1111 123355554233333333 2 479999999


Q ss_pred             CCc-h--------h---------------HHHHHHhhc-cCCEEEEEeeecc
Q 026217          129 VGG-K--------M---------------LDAVLLNMR-IQGRITLCGMISQ  155 (241)
Q Consensus       129 ~g~-~--------~---------------~~~~~~~l~-~~G~~v~~g~~~~  155 (241)
                      +|- .        .               .+.+...++ .+|+++.+++..+
T Consensus        86 AGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~  137 (242)
T 4b79_A           86 AGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYS  137 (242)
T ss_dssp             CCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGG
T ss_pred             CCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccc
Confidence            982 1        1               123444554 4799999987654

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=98.00  E-value=2.1e-05  Score=61.16  Aligned_cols=80  Identities=13%  Similarity=0.260  Sum_probs=55.8

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CC---C---eeecCCCchhHHHHHHHHCC--
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GF---D---EAFNYKEEPDLDAALKRYFP--  119 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~---~---~~i~~~~~~~~~~~i~~~~~--  119 (241)
                      .+.+++|+||+|++|.+.++.+...|++|+++++++++.+.+.+++   +.   .   ...|..+..++...+.+...  
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF   84 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHc
Confidence            4678999999999999999999899999999999988776655344   21   1   12344443233333332211  


Q ss_pred             CCccEEEeCCC
Q 026217          120 EGINIYFENVG  130 (241)
Q Consensus       120 ~~~d~v~d~~g  130 (241)
                      +++|++++++|
T Consensus        85 g~id~lv~~Ag   95 (278)
T 1spx_A           85 GKLDILVNNAG   95 (278)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            36999999987

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=98.00  E-value=4.1e-05  Score=57.13  Aligned_cols=91  Identities=18%  Similarity=0.150  Sum_probs=63.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe-eecCCCchhHHHHHHHHCCCCccEEEeCCCch
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFENVGGK  132 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~  132 (241)
                      +|+|+||+|.+|..+++.+...|.+|+++++++++.+.+.  -+... ..|..+. +. +.+     +++|+||+++|..
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~~~~~~~~D~~d~-~~-~~~-----~~~d~vi~~ag~~   72 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH--KDINILQKDIFDL-TL-SDL-----SDQNVVVDAYGIS   72 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC--SSSEEEECCGGGC-CH-HHH-----TTCSEEEECCCSS
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc--CCCeEEeccccCh-hh-hhh-----cCCCEEEECCcCC
Confidence            5999999999999999999999999999999987766542  23321 2233333 22 222     2599999999842


Q ss_pred             ---------hHHHHHHhhcc--CCEEEEEeee
Q 026217          133 ---------MLDAVLLNMRI--QGRITLCGMI  153 (241)
Q Consensus       133 ---------~~~~~~~~l~~--~G~~v~~g~~  153 (241)
                               ....+++.++.  .++++.++..
T Consensus        73 ~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~  104 (221)
T 3ew7_A           73 PDEAEKHVTSLDHLISVLNGTVSPRLLVVGGA  104 (221)
T ss_dssp             TTTTTSHHHHHHHHHHHHCSCCSSEEEEECCC
T ss_pred             ccccchHHHHHHHHHHHHHhcCCceEEEEecc
Confidence                     23456666655  3688888764

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=98.00  E-value=1.6e-05  Score=60.58  Aligned_cols=171  Identities=18%  Similarity=0.137  Sum_probs=97.9

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHHHHcCCCe---eecCCCchhHHHHHHHHC-CCCccE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK--DKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYF-PEGINI  124 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~--~~~~~~~~~~g~~~---~i~~~~~~~~~~~i~~~~-~~~~d~  124 (241)
                      .|.+++|+||++++|++.++.+...|++|++++++.  +..+.++ +.|...   ..|..++ .   .+++.. .+++|+
T Consensus         8 ~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~-~~g~~~~~~~~Dv~d~-~---~v~~~~~~g~iDi   82 (247)
T 4hp8_A            8 EGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIA-KDGGNASALLIDFADP-L---AAKDSFTDAGFDI   82 (247)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHH-HTTCCEEEEECCTTST-T---TTTTSSTTTCCCE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHH-HhCCcEEEEEccCCCH-H---HHHHHHHhCCCCE
Confidence            588999999999999999999999999999999874  3455666 666532   2233332 1   222222 248999


Q ss_pred             EEeCCCch-----------h---------------HHHHHHhh-c--cCCEEEEEeeecccCCCCCCC------------
Q 026217          125 YFENVGGK-----------M---------------LDAVLLNM-R--IQGRITLCGMISQYNNDKPEG------------  163 (241)
Q Consensus       125 v~d~~g~~-----------~---------------~~~~~~~l-~--~~G~~v~~g~~~~~~~~~~~~------------  163 (241)
                      +++++|..           .               .+.+++.| +  .+|+++.+++..+........            
T Consensus        83 LVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~~Y~asKaav~~l  162 (247)
T 4hp8_A           83 LVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGVAGL  162 (247)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCHHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCChHHHHHHHHHHHH
Confidence            99999731           1               12334444 2  358999998765431111000            


Q ss_pred             -ccChHHHhhcceEEEEeecccccchhHHHH---HHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCC
Q 026217          164 -VHNLTCLISKRIRMEGFLVPDYFHLYPKFL---EMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGR  229 (241)
Q Consensus       164 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~  229 (241)
                       ......+-.+++++.....+.......+.+   ....+.+.+.   .+..+.-.-+|+.++.-+|.+..
T Consensus       163 tr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~---~PlgR~g~peeiA~~v~fLaSd~  229 (247)
T 4hp8_A          163 TKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILER---IPAGRWGHSEDIAGAAVFLSSAA  229 (247)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTT---CTTSSCBCTHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhC---CCCCCCcCHHHHHHHHHHHhCch
Confidence             001233445677777666655422221111   1111222221   11222334678999999987654

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=98.00  E-value=2.5e-05  Score=60.43  Aligned_cols=104  Identities=16%  Similarity=0.198  Sum_probs=65.1

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHH---HcCCCe---eecCCCchhHHHHHHHHCC--CC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSA-GSKDKVDLLKN---KFGFDE---AFNYKEEPDLDAALKRYFP--EG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~-~~~~~~~~~~~---~~g~~~---~i~~~~~~~~~~~i~~~~~--~~  121 (241)
                      .+.+++|+||++++|.+.++.+...|++|+++. ++++..+.+.+   ..+...   ..|..+..++...+.+...  ++
T Consensus        26 ~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  105 (267)
T 3u5t_A           26 TNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGG  105 (267)
T ss_dssp             -CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999999988999998874 44444443332   334321   2344443223322322211  37


Q ss_pred             ccEEEeCCCch-----------h---------------HHHHHHhhccCCEEEEEeeec
Q 026217          122 INIYFENVGGK-----------M---------------LDAVLLNMRIQGRITLCGMIS  154 (241)
Q Consensus       122 ~d~v~d~~g~~-----------~---------------~~~~~~~l~~~G~~v~~g~~~  154 (241)
                      +|++++++|..           .               .+.++..++.+|+++.++...
T Consensus       106 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~  164 (267)
T 3u5t_A          106 VDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQ  164 (267)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChh
Confidence            99999999721           0               123444556678999987643

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=98.00  E-value=2.2e-05  Score=60.48  Aligned_cols=80  Identities=13%  Similarity=0.232  Sum_probs=54.5

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHHHc----CCCe---eecCCCchhHHHHHHHHCC--C
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK-VDLLKNKF----GFDE---AFNYKEEPDLDAALKRYFP--E  120 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~-~~~~~~~~----g~~~---~i~~~~~~~~~~~i~~~~~--~  120 (241)
                      .+.+++|+||+|++|.+.++.+...|++|+++++++++ .+.+.+++    +...   ..|..+..++...+.+...  +
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   82 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG   82 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            46789999999999999999999999999999988766 55443233    4321   2344443233333332211  3


Q ss_pred             CccEEEeCCC
Q 026217          121 GINIYFENVG  130 (241)
Q Consensus       121 ~~d~v~d~~g  130 (241)
                      ++|++++++|
T Consensus        83 ~iD~lv~~Ag   92 (260)
T 1x1t_A           83 RIDILVNNAG   92 (260)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6999999987

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.99  E-value=2.1e-05  Score=60.40  Aligned_cols=79  Identities=13%  Similarity=0.146  Sum_probs=54.2

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC-eeecCCCchhHHHHHHHHCC--CCccEEEe
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEPDLDAALKRYFP--EGINIYFE  127 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~-~~i~~~~~~~~~~~i~~~~~--~~~d~v~d  127 (241)
                      .+.+++|+||+|++|.+.++.+...|++|+++++++++ +.+.++++.. ...|..+..++...+.+...  +++|++++
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~   83 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLVN   83 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhhCCEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            46789999999999999999999999999999988777 4443355321 12344443133333332211  36999999


Q ss_pred             CCC
Q 026217          128 NVG  130 (241)
Q Consensus       128 ~~g  130 (241)
                      ++|
T Consensus        84 ~Ag   86 (256)
T 2d1y_A           84 NAA   86 (256)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            987

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=97.99  E-value=6.9e-05  Score=58.86  Aligned_cols=80  Identities=10%  Similarity=0.102  Sum_probs=53.9

Q ss_pred             CCcEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH---HHcCCCe--eecCCCchhHHHHHHHHCC--CC
Q 026217           51 QGEYVFVSAASG--AVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK---NKFGFDE--AFNYKEEPDLDAALKRYFP--EG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g--~~G~~avqla~~~g~~v~~~~~~~~~~~~~~---~~~g~~~--~i~~~~~~~~~~~i~~~~~--~~  121 (241)
                      .+.+++|+||+|  ++|.+.++.+...|++|++++++++..+.+.   ++.+...  ..|..+..++...+.+...  ++
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  108 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWGS  108 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            578999999987  9999999999999999999998875443332   1344322  2344443233333332211  37


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|++++++|
T Consensus       109 iD~lVnnAG  117 (296)
T 3k31_A          109 LDFVVHAVA  117 (296)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999997

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=97.99  E-value=3.6e-05  Score=59.24  Aligned_cols=80  Identities=18%  Similarity=0.269  Sum_probs=54.7

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCCe---eecCCCchhHHHHHHHHCC--CCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEPDLDAALKRYFP--EGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---~i~~~~~~~~~~~i~~~~~--~~~  122 (241)
                      .+.+++|+||+|++|.+.++.+...|++|+++++++++.+.+.+++   +...   ..|..+..++...+.+...  +++
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   92 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGV   92 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999999999999999999987665443232   3221   2344443123322222211  369


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |++++++|
T Consensus        93 D~lv~~Ag  100 (260)
T 2zat_A           93 DILVSNAA  100 (260)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=97.99  E-value=8.3e-06  Score=63.15  Aligned_cols=79  Identities=15%  Similarity=0.164  Sum_probs=54.2

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC-eeecCCCchhHHHHHHHHCC--CCccEEEe
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEPDLDAALKRYFP--EGINIYFE  127 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~-~~i~~~~~~~~~~~i~~~~~--~~~d~v~d  127 (241)
                      .+.+++|+||+|++|.+.++.+...|++|++++++.++.+.+. .-... ...|..+..++...+.+...  +++|++++
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvn   93 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN-LPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVN   93 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTC-CTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhh-cCCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence            4678999999999999999999999999999999887765443 11111 12344443233333332211  37999999


Q ss_pred             CCC
Q 026217          128 NVG  130 (241)
Q Consensus       128 ~~g  130 (241)
                      ++|
T Consensus        94 nAg   96 (266)
T 3p19_A           94 NAG   96 (266)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            998

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=97.99  E-value=5.4e-05  Score=58.24  Aligned_cols=80  Identities=14%  Similarity=0.195  Sum_probs=55.8

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC---eeecCCCchhHHHHHHHH---CCCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEPDLDAALKRY---FPEG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~~i~~~~~~~~~~~i~~~---~~~~  121 (241)
                      .+.+++|+||+|++|.+.++.+...|++|+++++++++.+.+.+++   +..   ...|..+..++...+...   ..++
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~   83 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGR   83 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            4678999999999999999999999999999999987765554333   322   123444432333333332   1347


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|++++++|
T Consensus        84 id~lvnnAg   92 (260)
T 2qq5_A           84 LDVLVNNAY   92 (260)
T ss_dssp             CCEEEECCC
T ss_pred             ceEEEECCc
Confidence            999999994

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.98  E-value=5.5e-05  Score=59.59  Aligned_cols=92  Identities=20%  Similarity=0.258  Sum_probs=70.6

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCC
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV  129 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~  129 (241)
                      -++.+|+|+|+ |.+|+.+++.++..|++|++.++++++.+.+. ++|.. +++.  . ++.+.+     ..+|+|+.++
T Consensus       155 l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~-~~g~~-~~~~--~-~l~~~l-----~~aDvVi~~~  223 (300)
T 2rir_A          155 IHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARIT-EMGLV-PFHT--D-ELKEHV-----KDIDICINTI  223 (300)
T ss_dssp             STTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCE-EEEG--G-GHHHHS-----TTCSEEEECC
T ss_pred             CCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HCCCe-EEch--h-hHHHHh-----hCCCEEEECC
Confidence            46889999996 99999999999999999999999988877777 67763 3222  1 333333     2599999999


Q ss_pred             Cchh-HHHHHHhhccCCEEEEEee
Q 026217          130 GGKM-LDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       130 g~~~-~~~~~~~l~~~G~~v~~g~  152 (241)
                      +... ....+..+++++.++.++.
T Consensus       224 p~~~i~~~~~~~mk~g~~lin~a~  247 (300)
T 2rir_A          224 PSMILNQTVLSSMTPKTLILDLAS  247 (300)
T ss_dssp             SSCCBCHHHHTTSCTTCEEEECSS
T ss_pred             ChhhhCHHHHHhCCCCCEEEEEeC
Confidence            8533 2456778899999988875

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.98  E-value=2.1e-05  Score=61.25  Aligned_cols=80  Identities=15%  Similarity=0.286  Sum_probs=55.3

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CC---C-e--eecCCCchhHHHHHHHHCC--
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GF---D-E--AFNYKEEPDLDAALKRYFP--  119 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~---~-~--~i~~~~~~~~~~~i~~~~~--  119 (241)
                      .+.+++|+||+|++|.+.++.+...|++|+++++++++.+.+.+++   +.   . .  ..|..+..++...+.+...  
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF   84 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhc
Confidence            4678999999999999999999999999999999988766554333   22   1 1  2344443233322322211  


Q ss_pred             CCccEEEeCCC
Q 026217          120 EGINIYFENVG  130 (241)
Q Consensus       120 ~~~d~v~d~~g  130 (241)
                      +++|++++++|
T Consensus        85 g~iD~lv~nAg   95 (280)
T 1xkq_A           85 GKIDVLVNNAG   95 (280)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            36999999987

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=97.98  E-value=3.3e-05  Score=59.92  Aligned_cols=80  Identities=10%  Similarity=0.064  Sum_probs=54.2

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHc----CCC-e--eecCCCc----hhHHHHHHHHC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKDKVDLLKNKF----GFD-E--AFNYKEE----PDLDAALKRYF  118 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~-~~~~~~~~~~~~----g~~-~--~i~~~~~----~~~~~~i~~~~  118 (241)
                      .+.+++|+||+|++|.++++.+...|++|+++++ ++++.+.+.+++    +.. .  ..|..+.    .++...+.+..
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   89 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSF   89 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999 877665554333    432 1  1233332    23333332221


Q ss_pred             C--CCccEEEeCCC
Q 026217          119 P--EGINIYFENVG  130 (241)
Q Consensus       119 ~--~~~d~v~d~~g  130 (241)
                      .  +++|++++++|
T Consensus        90 ~~~g~id~lv~nAg  103 (276)
T 1mxh_A           90 RAFGRCDVLVNNAS  103 (276)
T ss_dssp             HHHSCCCEEEECCC
T ss_pred             HhcCCCCEEEECCC
Confidence            1  36999999987

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=97.98  E-value=4.4e-05  Score=59.20  Aligned_cols=80  Identities=19%  Similarity=0.312  Sum_probs=55.5

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC---e--eecCCCchhHHHHHHHHCC--CCcc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD---E--AFNYKEEPDLDAALKRYFP--EGIN  123 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~---~--~i~~~~~~~~~~~i~~~~~--~~~d  123 (241)
                      .+.+++|+||+|++|...++.+...|++|+++++++++.+.+.++++..   .  ..|..+..++...+.+...  +++|
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   94 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLD   94 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4678999999999999999999999999999999887766555355421   1  2344443233333322211  3699


Q ss_pred             EEEeCCC
Q 026217          124 IYFENVG  130 (241)
Q Consensus       124 ~v~d~~g  130 (241)
                      ++++++|
T Consensus        95 ~li~~Ag  101 (278)
T 2bgk_A           95 IMFGNVG  101 (278)
T ss_dssp             EEEECCC
T ss_pred             EEEECCc
Confidence            9999887

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=97.97  E-value=1.5e-05  Score=61.48  Aligned_cols=79  Identities=15%  Similarity=0.090  Sum_probs=54.3

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHHcCCCe-eecCCCchhHHHHHHHHC--CCCccEEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKV-DLLKNKFGFDE-AFNYKEEPDLDAALKRYF--PEGINIYF  126 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~-~~~~~~~g~~~-~i~~~~~~~~~~~i~~~~--~~~~d~v~  126 (241)
                      .+.+++|+||+|++|.+.++.+...|++|+++++++++. +.++ +.+... ..|..+..++...+.+..  -+++|+++
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv  104 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELR-QAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVV  104 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHH-HHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH-hcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            467899999999999999999999999999999887653 3344 555432 234444323332232221  13799999


Q ss_pred             eCCC
Q 026217          127 ENVG  130 (241)
Q Consensus       127 d~~g  130 (241)
                      +++|
T Consensus       105 ~nAg  108 (260)
T 3gem_A          105 HNAS  108 (260)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9988

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=97.96  E-value=3.9e-05  Score=58.56  Aligned_cols=79  Identities=18%  Similarity=0.175  Sum_probs=54.6

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----CCC-e--eecCCCchhHHHHHHHHCC--CCc
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF----GFD-E--AFNYKEEPDLDAALKRYFP--EGI  122 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~----g~~-~--~i~~~~~~~~~~~i~~~~~--~~~  122 (241)
                      +.+++|+||+|++|...++.+...|++|+++++++++.+.+.+++    +.. .  ..|..+..++.+.+.+...  +++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI   81 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            468999999999999999999999999999999988776655344    221 1  2344443133333332211  369


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |++++++|
T Consensus        82 d~li~~Ag   89 (250)
T 2cfc_A           82 DVLVNNAG   89 (250)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=97.96  E-value=4.6e-05  Score=59.92  Aligned_cols=80  Identities=14%  Similarity=0.248  Sum_probs=55.5

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----CCC-e--eecCCCchhHHHHHHHHC--CCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF----GFD-E--AFNYKEEPDLDAALKRYF--PEG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~----g~~-~--~i~~~~~~~~~~~i~~~~--~~~  121 (241)
                      .+.+++|+||+|++|.+.++.+...|++|+++++++++.+.+.+++    +.. .  ..|..+..++...+....  -++
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  104 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGH  104 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999999999999999999999999999999987765544233    432 1  234444323333332221  137


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|++++++|
T Consensus       105 id~li~~Ag  113 (302)
T 1w6u_A          105 PNIVINNAA  113 (302)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=97.96  E-value=6.1e-05  Score=58.09  Aligned_cols=80  Identities=13%  Similarity=0.223  Sum_probs=54.5

Q ss_pred             CCcEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHHHcCCCe--eecCCCchhHHHHHHHHCC--CC
Q 026217           51 QGEYVFVSAAS--GAVGQLVGQFAKLVGCYVVGSAGSK---DKVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFP--EG  121 (241)
Q Consensus        51 ~~~~vlI~ga~--g~~G~~avqla~~~g~~v~~~~~~~---~~~~~~~~~~g~~~--~i~~~~~~~~~~~i~~~~~--~~  121 (241)
                      .+.+++|+||+  |++|.++++.+...|++|+++++++   +..+.+.+..+...  ..|..+..++...+.+...  ++
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   87 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPK   87 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSS
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            46789999998  9999999999999999999999876   33444442334322  2355544233333333322  37


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|++++++|
T Consensus        88 iD~lv~~Ag   96 (265)
T 1qsg_A           88 FDGFVHSIG   96 (265)
T ss_dssp             EEEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=97.96  E-value=4.3e-05  Score=58.20  Aligned_cols=80  Identities=20%  Similarity=0.449  Sum_probs=55.2

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----cCCC-e--eecCCCchhHHHHHHHHC--CCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK----FGFD-E--AFNYKEEPDLDAALKRYF--PEG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~----~g~~-~--~i~~~~~~~~~~~i~~~~--~~~  121 (241)
                      .+.+++|+||+|++|...++.+...|++|+++++++++.+.+.++    .+.. .  ..|..+..++...+.+..  -++
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDG   85 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            467899999999999999999999999999999998776655423    3432 1  224444313333333221  136


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|++++++|
T Consensus        86 ~d~vi~~Ag   94 (248)
T 2pnf_A           86 IDILVNNAG   94 (248)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=97.96  E-value=4.7e-05  Score=59.57  Aligned_cols=80  Identities=15%  Similarity=0.228  Sum_probs=56.9

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHc-----CCC---eeecCCCchhHHHHHHHHCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGC---YVVGSAGSKDKVDLLKNKF-----GFD---EAFNYKEEPDLDAALKRYFP  119 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~---~v~~~~~~~~~~~~~~~~~-----g~~---~~i~~~~~~~~~~~i~~~~~  119 (241)
                      .+.+++|+||++++|.+.++.+...|+   +|+++++++++.+.+.+++     +..   ...|..+..++...+.+...
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  111 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ  111 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            468999999999999998887777776   9999999988877665343     322   12355554245544544433


Q ss_pred             --CCccEEEeCCC
Q 026217          120 --EGINIYFENVG  130 (241)
Q Consensus       120 --~~~d~v~d~~g  130 (241)
                        +++|++++++|
T Consensus       112 ~~g~iD~lVnnAG  124 (287)
T 3rku_A          112 EFKDIDILVNNAG  124 (287)
T ss_dssp             GGCSCCEEEECCC
T ss_pred             hcCCCCEEEECCC
Confidence              37999999988

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=97.95  E-value=2.6e-05  Score=60.27  Aligned_cols=78  Identities=13%  Similarity=0.212  Sum_probs=54.8

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc-----CCC---eeecCCCchhHHHHHHHHCCCCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF-----GFD---EAFNYKEEPDLDAALKRYFPEGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~-----g~~---~~i~~~~~~~~~~~i~~~~~~~~  122 (241)
                      .+.+++|+||++++|.+.++.+...|++|+++++++++.+.+.+++     +..   ...|..+. ...+.+.+.. +++
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~-g~i   86 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTE-QGCQDVIEKY-PKV   86 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSH-HHHHHHHHHC-CCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCH-HHHHHHHHhc-CCC
Confidence            4689999999999999999999999999999999987765544232     111   12344444 3233333322 369


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |++++++|
T Consensus        87 d~lv~nAg   94 (267)
T 3t4x_A           87 DILINNLG   94 (267)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999997

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.95  E-value=2.5e-05  Score=61.42  Aligned_cols=80  Identities=19%  Similarity=0.338  Sum_probs=55.2

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CC---C-e--eecCCCchhHHHHHHHHCC--
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GF---D-E--AFNYKEEPDLDAALKRYFP--  119 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~---~-~--~i~~~~~~~~~~~i~~~~~--  119 (241)
                      .+.+++|+||+|++|.+.++.+...|++|+++++++++.+.+.+++   +.   . .  ..|..+..++...+.+...  
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  104 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF  104 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhc
Confidence            4678999999999999999999999999999999988766554232   32   1 1  2344443233333322211  


Q ss_pred             CCccEEEeCCC
Q 026217          120 EGINIYFENVG  130 (241)
Q Consensus       120 ~~~d~v~d~~g  130 (241)
                      +++|++++++|
T Consensus       105 g~iD~lvnnAG  115 (297)
T 1xhl_A          105 GKIDILVNNAG  115 (297)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            36999999987

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=97.94  E-value=3.8e-05  Score=59.21  Aligned_cols=80  Identities=16%  Similarity=0.321  Sum_probs=54.7

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC-e--eecCCCchhHHHHH---HHHCCCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAAL---KRYFPEG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~--~i~~~~~~~~~~~i---~~~~~~~  121 (241)
                      .+.+++|+||+|++|...++.+...|++|+++++++++.+.+.+++   +.. .  ..|..+..++...+   .+..+++
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   92 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK   92 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            4678999999999999999999999999999999987765543232   332 1  23444431222222   2222247


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|++++++|
T Consensus        93 id~li~~Ag  101 (266)
T 1xq1_A           93 LDILINNLG  101 (266)
T ss_dssp             CSEEEEECC
T ss_pred             CcEEEECCC
Confidence            999999987

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=97.94  E-value=0.00011  Score=57.74  Aligned_cols=105  Identities=11%  Similarity=0.090  Sum_probs=66.1

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHHH---HcCCCe---eecCCCchhHHHHHHHHCC--C
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK--DKVDLLKN---KFGFDE---AFNYKEEPDLDAALKRYFP--E  120 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~--~~~~~~~~---~~g~~~---~i~~~~~~~~~~~i~~~~~--~  120 (241)
                      .+.++||+||++++|.+.++.+...|++|++++++.  +..+.+.+   +.|...   ..|..+..++...+.+...  +
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  127 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALG  127 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999998762  23333221   344321   2244443122222222211  3


Q ss_pred             CccEEEeCCCc-h---h-----------------------HHHHHHhhccCCEEEEEeeecc
Q 026217          121 GINIYFENVGG-K---M-----------------------LDAVLLNMRIQGRITLCGMISQ  155 (241)
Q Consensus       121 ~~d~v~d~~g~-~---~-----------------------~~~~~~~l~~~G~~v~~g~~~~  155 (241)
                      ++|++++++|. .   .                       .+.++..+.++|+++.++....
T Consensus       128 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~  189 (294)
T 3r3s_A          128 GLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQA  189 (294)
T ss_dssp             CCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGG
T ss_pred             CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhh
Confidence            79999999873 1   0                       1223344556799999987554

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=97.93  E-value=4.1e-05  Score=59.39  Aligned_cols=78  Identities=13%  Similarity=0.254  Sum_probs=56.2

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC--C---eeecCCCchhHHHHHHHHCC--CCccEE
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF--D---EAFNYKEEPDLDAALKRYFP--EGINIY  125 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~--~---~~i~~~~~~~~~~~i~~~~~--~~~d~v  125 (241)
                      .+++|+||+|++|.+.++.+...|++|+++++++++.+.+.+++..  .   ...|..+..++...+.+...  +++|++
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  101 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGL  101 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEE
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            6899999999999999999999999999999998887766545432  1   12344444233333333322  378999


Q ss_pred             EeCCC
Q 026217          126 FENVG  130 (241)
Q Consensus       126 ~d~~g  130 (241)
                      ++++|
T Consensus       102 vnnAG  106 (272)
T 2nwq_A          102 INNAG  106 (272)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=97.93  E-value=4.4e-05  Score=58.37  Aligned_cols=80  Identities=19%  Similarity=0.263  Sum_probs=54.6

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC-e--eecCCCchhHHHHHHHHCC--CCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYFP--EGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~--~i~~~~~~~~~~~i~~~~~--~~~  122 (241)
                      .+.+++|+||+|++|...++.+...|++|+++++++++.+.+.+++   +.. .  ..|..+..++...+.....  +++
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   89 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKV   89 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            4678999999999999999999999999999999987665444232   322 1  2344443123332322211  369


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |++++++|
T Consensus        90 d~vi~~Ag   97 (255)
T 1fmc_A           90 DILVNNAG   97 (255)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=97.93  E-value=6e-05  Score=59.30  Aligned_cols=80  Identities=18%  Similarity=0.267  Sum_probs=54.9

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc--------CCC-e--eecCCCchhHHHHHHHHCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF--------GFD-E--AFNYKEEPDLDAALKRYFP  119 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~--------g~~-~--~i~~~~~~~~~~~i~~~~~  119 (241)
                      .+.+++|+||+|++|.+.++.+...|++|+++++++++.+.+.+++        +.. .  ..|..+..++...+.....
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   96 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLD   96 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHH
Confidence            4679999999999999999999999999999999987765544332        221 1  2344443133333322211


Q ss_pred             --CCccEEEeCCC
Q 026217          120 --EGINIYFENVG  130 (241)
Q Consensus       120 --~~~d~v~d~~g  130 (241)
                        +++|++|+++|
T Consensus        97 ~~g~id~li~~Ag  109 (303)
T 1yxm_A           97 TFGKINFLVNNGG  109 (303)
T ss_dssp             HHSCCCEEEECCC
T ss_pred             HcCCCCEEEECCC
Confidence              36999999987

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=97.92  E-value=5.4e-05  Score=59.10  Aligned_cols=80  Identities=21%  Similarity=0.256  Sum_probs=54.1

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCCe----eecCCCchhHHHHHHHHC--CCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDE----AFNYKEEPDLDAALKRYF--PEG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~---~g~~~----~i~~~~~~~~~~~i~~~~--~~~  121 (241)
                      ++.+++|+||+|++|.++++.+...|++|+++++++++.+.+.++   .+...    ..|..+...+...+.+..  -++
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~  106 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGG  106 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            467899999999999999999999999999999998876655422   23321    234444312222222221  136


Q ss_pred             ccEEEeC-CC
Q 026217          122 INIYFEN-VG  130 (241)
Q Consensus       122 ~d~v~d~-~g  130 (241)
                      +|+++++ .|
T Consensus       107 iD~li~naag  116 (286)
T 1xu9_A          107 LDMLILNHIT  116 (286)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCcc
Confidence            9999998 44

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.92  E-value=4.8e-05  Score=59.22  Aligned_cols=81  Identities=15%  Similarity=0.233  Sum_probs=54.7

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-------------CHHHHHHHHHH---cCCC---eeecCCCchhH
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG-------------SKDKVDLLKNK---FGFD---EAFNYKEEPDL  110 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~-------------~~~~~~~~~~~---~g~~---~~i~~~~~~~~  110 (241)
                      -.+.+++|+||++++|.+.++.+...|++|+++++             ++++.+.+.+.   .|..   ...|..+..++
T Consensus        13 l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   92 (280)
T 3pgx_A           13 LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAAL   92 (280)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence            36789999999999999999999999999999987             55655544423   2322   12355544233


Q ss_pred             HHHHHHHCC--CCccEEEeCCC
Q 026217          111 DAALKRYFP--EGINIYFENVG  130 (241)
Q Consensus       111 ~~~i~~~~~--~~~d~v~d~~g  130 (241)
                      ...+.+...  +++|++++++|
T Consensus        93 ~~~~~~~~~~~g~id~lvnnAg  114 (280)
T 3pgx_A           93 RELVADGMEQFGRLDVVVANAG  114 (280)
T ss_dssp             HHHHHHHHHHHCCCCEEEECCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCC
Confidence            333332211  37999999987

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=97.92  E-value=4e-05  Score=58.96  Aligned_cols=80  Identities=16%  Similarity=0.199  Sum_probs=54.5

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHHc---CCCe---eecCCCchhHHHHHHHHCC--CC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGS-AGSKDKVDLLKNKF---GFDE---AFNYKEEPDLDAALKRYFP--EG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~-~~~~~~~~~~~~~~---g~~~---~i~~~~~~~~~~~i~~~~~--~~  121 (241)
                      .+.+++|+||+|++|.+.++.+...|++|+++ .+++++.+.+.+++   +...   ..|..+..++...+.+...  ++
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR   82 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999887 77777665554333   3321   2344443233333322211  36


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|++++++|
T Consensus        83 id~lv~nAg   91 (258)
T 3oid_A           83 LDVFVNNAA   91 (258)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999997

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=97.91  E-value=6.1e-05  Score=58.72  Aligned_cols=80  Identities=10%  Similarity=0.187  Sum_probs=53.4

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHc----CCCe---eecCCCchhHHHHHHHHC--CC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKDKVDLLKNKF----GFDE---AFNYKEEPDLDAALKRYF--PE  120 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~-~~~~~~~~~~~~----g~~~---~i~~~~~~~~~~~i~~~~--~~  120 (241)
                      .+.+++|+||++++|.+.++.+...|++|+++++ ++++.+.+.+++    +...   ..|..+..++...+.+..  -+
T Consensus        24 ~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  103 (281)
T 3v2h_A           24 MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFG  103 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCC
Confidence            4679999999999999999999999999999998 555554443233    2211   234444323333232221  13


Q ss_pred             CccEEEeCCC
Q 026217          121 GINIYFENVG  130 (241)
Q Consensus       121 ~~d~v~d~~g  130 (241)
                      ++|++++++|
T Consensus       104 ~iD~lv~nAg  113 (281)
T 3v2h_A          104 GADILVNNAG  113 (281)
T ss_dssp             SCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=97.91  E-value=3.4e-05  Score=58.84  Aligned_cols=80  Identities=14%  Similarity=0.179  Sum_probs=54.6

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CC--Cee--ecC--CCchhHHHHHHHHCC--
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GF--DEA--FNY--KEEPDLDAALKRYFP--  119 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~--~~~--i~~--~~~~~~~~~i~~~~~--  119 (241)
                      .+.+++|+||+|++|.+.++.+...|++|+++++++++.+.+.+++   +.  ..+  +|.  .+..++...+.....  
T Consensus        13 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~~   92 (247)
T 3i1j_A           13 KGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHEF   92 (247)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHhC
Confidence            5789999999999999999999999999999999988776654332   21  112  222  332122222222211  


Q ss_pred             CCccEEEeCCC
Q 026217          120 EGINIYFENVG  130 (241)
Q Consensus       120 ~~~d~v~d~~g  130 (241)
                      +++|++++++|
T Consensus        93 g~id~lv~nAg  103 (247)
T 3i1j_A           93 GRLDGLLHNAS  103 (247)
T ss_dssp             SCCSEEEECCC
T ss_pred             CCCCEEEECCc
Confidence            36999999987

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=97.91  E-value=1.8e-05  Score=60.87  Aligned_cols=104  Identities=12%  Similarity=0.099  Sum_probs=68.6

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH---HHHHcCCC---eeecCCCchhHHHHHHHHCC--CCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDL---LKNKFGFD---EAFNYKEEPDLDAALKRYFP--EGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~---~~~~~g~~---~~i~~~~~~~~~~~i~~~~~--~~~  122 (241)
                      +|.+++|+||++++|++.++.+...|++|+++++++++.+.   +. +.+..   ...|..++.+..+.+.+...  |++
T Consensus         6 ~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~i   84 (258)
T 4gkb_A            6 QDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALA-QRQPRATYLPVELQDDAQCRDAVAQTIATFGRL   84 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHH-HHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHH-hcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            57899999999999999999999999999999987654433   33 33432   12344444233333332221  479


Q ss_pred             cEEEeCCCch----------h---------------HHHHHHhhc-cCCEEEEEeeecc
Q 026217          123 NIYFENVGGK----------M---------------LDAVLLNMR-IQGRITLCGMISQ  155 (241)
Q Consensus       123 d~v~d~~g~~----------~---------------~~~~~~~l~-~~G~~v~~g~~~~  155 (241)
                      |++++++|-.          .               .+.++..++ .+|+++.+++..+
T Consensus        85 DiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~  143 (258)
T 4gkb_A           85 DGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTA  143 (258)
T ss_dssp             CEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHH
T ss_pred             CEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhh
Confidence            9999999731          1               133444454 4799999987554

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=97.91  E-value=3.1e-05  Score=60.17  Aligned_cols=78  Identities=15%  Similarity=0.171  Sum_probs=55.1

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCCe---eecCCCchh---HHHHHHHHCCCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEPD---LDAALKRYFPEG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---~i~~~~~~~---~~~~i~~~~~~~  121 (241)
                      .+.+++|+||++++|.+.++.+...|++|+++++++++.+.+.+++   +...   ..|..+..+   +.+.+.+.  ++
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~--g~  109 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAI--AP  109 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHH--SC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHh--CC
Confidence            5789999999999999999999999999999999877655444232   3321   223333312   33334333  57


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|++++++|
T Consensus       110 iD~lvnnAg  118 (275)
T 4imr_A          110 VDILVINAS  118 (275)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999998

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=97.91  E-value=4.8e-05  Score=58.44  Aligned_cols=79  Identities=10%  Similarity=0.200  Sum_probs=53.0

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHHc---CCC-e--eecCCCchhHHHHHHHHCC--CC
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK--VDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYFP--EG  121 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~--~~~~~~~~---g~~-~--~i~~~~~~~~~~~i~~~~~--~~  121 (241)
                      +.+++|+||+|++|.+.++.+...|++|+++++++++  .+.+.+++   +.. .  ..|..+..++...+.+...  ++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG   81 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5689999999999999999888889999999988766  44433233   322 1  2344443233333322211  36


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|++++++|
T Consensus        82 iD~lv~nAg   90 (258)
T 3a28_C           82 FDVLVNNAG   90 (258)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=97.90  E-value=8.9e-05  Score=56.96  Aligned_cols=80  Identities=20%  Similarity=0.269  Sum_probs=54.6

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHH---cCCEEEEEeCCHHHHHHHHHHc-----CCC-e--eecCCCchhHHHHHHHH--
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKL---VGCYVVGSAGSKDKVDLLKNKF-----GFD-E--AFNYKEEPDLDAALKRY--  117 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~---~g~~v~~~~~~~~~~~~~~~~~-----g~~-~--~i~~~~~~~~~~~i~~~--  117 (241)
                      .+.+++|+||+|++|.+.++.+..   .|++|+++++++++.+.+.+++     +.. .  ..|..+..++...+...  
T Consensus         5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   84 (259)
T 1oaa_A            5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE   84 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHh
Confidence            467899999999999998888877   8999999999988766554343     322 1  23444442333333333  


Q ss_pred             --CCCCcc--EEEeCCC
Q 026217          118 --FPEGIN--IYFENVG  130 (241)
Q Consensus       118 --~~~~~d--~v~d~~g  130 (241)
                        ..+++|  ++++++|
T Consensus        85 ~~~~g~~d~~~lvnnAg  101 (259)
T 1oaa_A           85 LPRPEGLQRLLLINNAA  101 (259)
T ss_dssp             SCCCTTCCEEEEEECCC
T ss_pred             ccccccCCccEEEECCc
Confidence              223677  9999887

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=97.90  E-value=4.9e-05  Score=59.33  Aligned_cols=80  Identities=13%  Similarity=0.336  Sum_probs=54.6

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCCe---eecCCCchhHHHHHHHHC--CCCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEPDLDAALKRYF--PEGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---~i~~~~~~~~~~~i~~~~--~~~~  122 (241)
                      .+.+++|+||+|++|..+++.+...|++|+++.+++++.+.+.+++   +...   ..|..+..++...+.+..  -+++
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~i  122 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV  122 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            3678999999999999999988889999999998877665544233   3321   234444323333333221  1369


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |++|+++|
T Consensus       123 d~li~~Ag  130 (285)
T 2c07_A          123 DILVNNAG  130 (285)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=97.90  E-value=5.9e-05  Score=58.02  Aligned_cols=80  Identities=13%  Similarity=0.116  Sum_probs=54.2

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC----------CC-e--eecCCCchhHHHHHHHH
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFG----------FD-E--AFNYKEEPDLDAALKRY  117 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g----------~~-~--~i~~~~~~~~~~~i~~~  117 (241)
                      .+.+++|+||+|++|...++.+...|++|+++++++++.+.+.+++.          .. .  ..|..+...+...+...
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   85 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQV   85 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHH
Confidence            46789999999999999999999999999999999887766543331          11 1  23444431333333222


Q ss_pred             CC--CCc-cEEEeCCC
Q 026217          118 FP--EGI-NIYFENVG  130 (241)
Q Consensus       118 ~~--~~~-d~v~d~~g  130 (241)
                      ..  +++ |++++++|
T Consensus        86 ~~~~g~i~d~vi~~Ag  101 (264)
T 2pd6_A           86 QACFSRPPSVVVSCAG  101 (264)
T ss_dssp             HHHHSSCCSEEEECCC
T ss_pred             HHHhCCCCeEEEECCC
Confidence            11  256 99999987

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=97.89  E-value=3.5e-05  Score=59.05  Aligned_cols=81  Identities=19%  Similarity=0.304  Sum_probs=54.0

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHHc---CCC---eeecCCCchhHHHHHHHHCC--CC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS-KDKVDLLKNKF---GFD---EAFNYKEEPDLDAALKRYFP--EG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~-~~~~~~~~~~~---g~~---~~i~~~~~~~~~~~i~~~~~--~~  121 (241)
                      .+.+++|+||+|++|...++.+...|++|++++++ +++.+.+.+++   +..   ...|..+..++...+.+...  ++
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGG   85 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            46789999999999999999999999999999987 65554443232   322   12344443233333332211  36


Q ss_pred             ccEEEeCCCc
Q 026217          122 INIYFENVGG  131 (241)
Q Consensus       122 ~d~v~d~~g~  131 (241)
                      +|++|+++|.
T Consensus        86 id~vi~~Ag~   95 (258)
T 3afn_B           86 IDVLINNAGG   95 (258)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999873

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=97.89  E-value=3.8e-05  Score=58.89  Aligned_cols=79  Identities=22%  Similarity=0.275  Sum_probs=54.5

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHcCCCe---eecCCCchhHHHHHHHHCC--CCccE
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGINI  124 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~--g~~v~~~~~~~~~~~~~~~~~g~~~---~i~~~~~~~~~~~i~~~~~--~~~d~  124 (241)
                      +.+++|+||++++|.+.++.+...  |++|+.+++++++.+.+.++++...   ..|..+..++...+.+...  +++|+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   81 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDS   81 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccE
Confidence            568999999999999888776665  5799999999988887775665321   2344443233332322211  37999


Q ss_pred             EEeCCC
Q 026217          125 YFENVG  130 (241)
Q Consensus       125 v~d~~g  130 (241)
                      +++++|
T Consensus        82 lvnnAg   87 (254)
T 3kzv_A           82 LVANAG   87 (254)
T ss_dssp             EEEECC
T ss_pred             EEECCc
Confidence            999987

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=97.89  E-value=5.9e-05  Score=58.89  Aligned_cols=80  Identities=15%  Similarity=0.194  Sum_probs=53.8

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC----------------HHHHHHHHHHc---CCC---eeecCCCch
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS----------------KDKVDLLKNKF---GFD---EAFNYKEEP  108 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~----------------~~~~~~~~~~~---g~~---~~i~~~~~~  108 (241)
                      .+.+++|+||++++|.+.++.+...|++|++++++                +++.+.+.+++   +..   ...|..+..
T Consensus        10 ~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   89 (286)
T 3uve_A           10 EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYD   89 (286)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHH
Confidence            57899999999999999999999999999999876                55554443232   322   123444432


Q ss_pred             hHHHHHHHHCC--CCccEEEeCCC
Q 026217          109 DLDAALKRYFP--EGINIYFENVG  130 (241)
Q Consensus       109 ~~~~~i~~~~~--~~~d~v~d~~g  130 (241)
                      ++...+.+...  +++|++++++|
T Consensus        90 ~v~~~~~~~~~~~g~id~lv~nAg  113 (286)
T 3uve_A           90 ALKAAVDSGVEQLGRLDIIVANAG  113 (286)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             HHHHHHHHHHHHhCCCCEEEECCc
Confidence            33333332211  36999999987

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=97.89  E-value=6.5e-05  Score=57.29  Aligned_cols=77  Identities=17%  Similarity=0.290  Sum_probs=55.0

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC-C-eeecCCCchhHHHHHHHHCCCCccEEEeC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF-D-EAFNYKEEPDLDAALKRYFPEGINIYFEN  128 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~-~-~~i~~~~~~~~~~~i~~~~~~~~d~v~d~  128 (241)
                      .+.+++|+||+|++|.+.++.+...|++|+++++++++.+.+. ++.. . ...|..+. +..+++.+.. +++|+++++
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~D~~~~-~~~~~~~~~~-~~id~lv~~   81 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KYPGIQTRVLDVTKK-KQIDQFANEV-ERLDVLFNV   81 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GSTTEEEEECCTTCH-HHHHHHHHHC-SCCSEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hccCceEEEeeCCCH-HHHHHHHHHh-CCCCEEEEC
Confidence            4678999999999999999999999999999999987766554 4321 1 12344444 2222333322 369999999


Q ss_pred             CC
Q 026217          129 VG  130 (241)
Q Consensus       129 ~g  130 (241)
                      +|
T Consensus        82 Ag   83 (246)
T 2ag5_A           82 AG   83 (246)
T ss_dssp             CC
T ss_pred             Cc
Confidence            87

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=97.89  E-value=1.8e-05  Score=60.67  Aligned_cols=95  Identities=15%  Similarity=0.195  Sum_probs=59.8

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCch
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGK  132 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~  132 (241)
                      .+++|+||+|++|.++++.+...|++|+++++++++.+    .   ....|..+..++...+.+. .+++|++++++|..
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----~---~~~~Dl~~~~~v~~~~~~~-~~~id~lv~~Ag~~   73 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVI----A---DLSTAEGRKQAIADVLAKC-SKGMDGLVLCAGLG   73 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE----C---CTTSHHHHHHHHHHHHTTC-TTCCSEEEECCCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhc----c---ccccCCCCHHHHHHHHHHh-CCCCCEEEECCCCC
Confidence            36999999999999999999999999999998754321    0   1111222110222222222 24789999999832


Q ss_pred             h-------------------HHHHHHhhcc--CCEEEEEeeecc
Q 026217          133 M-------------------LDAVLLNMRI--QGRITLCGMISQ  155 (241)
Q Consensus       133 ~-------------------~~~~~~~l~~--~G~~v~~g~~~~  155 (241)
                      .                   .+.++..+..  .|+++.+++...
T Consensus        74 ~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~  117 (257)
T 1fjh_A           74 PQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVAS  117 (257)
T ss_dssp             TTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGG
T ss_pred             CCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhh
Confidence            1                   2334444433  389999987554

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=97.88  E-value=6.1e-05  Score=58.08  Aligned_cols=80  Identities=23%  Similarity=0.375  Sum_probs=55.5

Q ss_pred             CCcEEEEEcCCc-hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC----eeecCCCchhHHHHHHHHCC--C
Q 026217           51 QGEYVFVSAASG-AVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD----EAFNYKEEPDLDAALKRYFP--E  120 (241)
Q Consensus        51 ~~~~vlI~ga~g-~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~----~~i~~~~~~~~~~~i~~~~~--~  120 (241)
                      .+.+++|+||+| ++|...++.+...|++|+++++++++.+.+.+++   +..    ...|..+..++...+.+...  +
T Consensus        21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  100 (266)
T 3o38_A           21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAG  100 (266)
T ss_dssp             TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhC
Confidence            578999999986 8999999999999999999999988766655444   211    12344443233333322211  3


Q ss_pred             CccEEEeCCC
Q 026217          121 GINIYFENVG  130 (241)
Q Consensus       121 ~~d~v~d~~g  130 (241)
                      ++|++++++|
T Consensus       101 ~id~li~~Ag  110 (266)
T 3o38_A          101 RLDVLVNNAG  110 (266)
T ss_dssp             CCCEEEECCC
T ss_pred             CCcEEEECCC
Confidence            6999999998

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=97.88  E-value=0.00014  Score=59.51  Aligned_cols=101  Identities=15%  Similarity=0.158  Sum_probs=73.6

Q ss_pred             HHHHHHHHhcC-CCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHH
Q 026217           38 TAYAGFFEVCS-PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKR  116 (241)
Q Consensus        38 ta~~~l~~~~~-~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~  116 (241)
                      ..+.++.+..+ .-.|.+|+|.|. |.+|...++.++.+|++|+++++++.+...+. ..|....       ++.+.+. 
T Consensus       196 slldgi~ratg~~L~GktVgIiG~-G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~-~~G~~~~-------sL~eal~-  265 (436)
T 3h9u_A          196 SLVDGIKRATDVMIAGKTACVCGY-GDVGKGCAAALRGFGARVVVTEVDPINALQAA-MEGYQVL-------LVEDVVE-  265 (436)
T ss_dssp             HHHHHHHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCEEC-------CHHHHTT-
T ss_pred             HHHHHHHHhcCCcccCCEEEEEee-CHHHHHHHHHHHHCCCEEEEECCChhhhHHHH-HhCCeec-------CHHHHHh-
Confidence            34445544333 347899999995 99999999999999999999998887776666 6665321       3433343 


Q ss_pred             HCCCCccEEEeCCCch-hH-HHHHHhhccCCEEEEEee
Q 026217          117 YFPEGINIYFENVGGK-ML-DAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       117 ~~~~~~d~v~d~~g~~-~~-~~~~~~l~~~G~~v~~g~  152 (241)
                          ..|+++.+.++. .+ ...+..++++..++.++.
T Consensus       266 ----~ADVVilt~gt~~iI~~e~l~~MK~gAIVINvgR  299 (436)
T 3h9u_A          266 ----EAHIFVTTTGNDDIITSEHFPRMRDDAIVCNIGH  299 (436)
T ss_dssp             ----TCSEEEECSSCSCSBCTTTGGGCCTTEEEEECSS
T ss_pred             ----hCCEEEECCCCcCccCHHHHhhcCCCcEEEEeCC
Confidence                499999988853 22 356778899988888864

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.88  E-value=0.00024  Score=51.52  Aligned_cols=93  Identities=12%  Similarity=0.084  Sum_probs=64.7

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHcCCCeee-cCCCchhHHHHHHHH-CCCCccEEEeC
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKFGFDEAF-NYKEEPDLDAALKRY-FPEGINIYFEN  128 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~-g~~v~~~~~~~~~~~~~~~~~g~~~~i-~~~~~~~~~~~i~~~-~~~~~d~v~d~  128 (241)
                      +++|+|.|+ |.+|..+++.++.. |.+|+++++++++.+.++ +.|...+. |..+. +   .+.+. .-.++|+|+.+
T Consensus        39 ~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~-~~g~~~~~gd~~~~-~---~l~~~~~~~~ad~vi~~  112 (183)
T 3c85_A           39 HAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQHR-SEGRNVISGDATDP-D---FWERILDTGHVKLVLLA  112 (183)
T ss_dssp             TCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHH-HTTCCEEECCTTCH-H---HHHTBCSCCCCCEEEEC
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHH-HCCCCEEEcCCCCH-H---HHHhccCCCCCCEEEEe
Confidence            568999995 99999999999998 999999999999999888 77875432 33332 2   23333 12379999999


Q ss_pred             CCch-hHHHHHHh---hccCCEEEEE
Q 026217          129 VGGK-MLDAVLLN---MRIQGRITLC  150 (241)
Q Consensus       129 ~g~~-~~~~~~~~---l~~~G~~v~~  150 (241)
                      ++.. ....+...   +.+..+++..
T Consensus       113 ~~~~~~~~~~~~~~~~~~~~~~ii~~  138 (183)
T 3c85_A          113 MPHHQGNQTALEQLQRRNYKGQIAAI  138 (183)
T ss_dssp             CSSHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred             CCChHHHHHHHHHHHHHCCCCEEEEE
Confidence            9863 33333333   3444565543

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=97.88  E-value=5.5e-05  Score=56.52  Aligned_cols=94  Identities=13%  Similarity=0.179  Sum_probs=62.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe-eecCCCchhHHHHHHHHCCCCccEEEeCCCch
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFENVGGK  132 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~  132 (241)
                      +|+|+||+|.+|...++.+...|.+|+++++++++.+.+.   +... ..|..+   ..+.+.+... ++|+||+++|..
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---~~~~~~~D~~d---~~~~~~~~~~-~~d~vi~~ag~~   74 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQYN---NVKAVHFDVDW---TPEEMAKQLH-GMDAIINVSGSG   74 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCCT---TEEEEECCTTS---CHHHHHTTTT-TCSEEEECCCCT
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhcC---CceEEEecccC---CHHHHHHHHc-CCCEEEECCcCC
Confidence            5999999999999999999999999999999876543221   1111 223332   1234444333 599999999842


Q ss_pred             ----------hHHHHHHhhccC--CEEEEEeeec
Q 026217          133 ----------MLDAVLLNMRIQ--GRITLCGMIS  154 (241)
Q Consensus       133 ----------~~~~~~~~l~~~--G~~v~~g~~~  154 (241)
                                ....+++.++..  ++++.++...
T Consensus        75 ~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~  108 (219)
T 3dqp_A           75 GKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIF  108 (219)
T ss_dssp             TSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred             CCCcEeEeHHHHHHHHHHHHHhCCCEEEEECccc
Confidence                      133444544443  5888887743

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=97.88  E-value=6e-05  Score=57.88  Aligned_cols=80  Identities=15%  Similarity=0.199  Sum_probs=53.6

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHc---CCC-e--eecCCCchhHHHHHHHHCC--CC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYFP--EG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~-~~~~~~~~~~~~---g~~-~--~i~~~~~~~~~~~i~~~~~--~~  121 (241)
                      .+.+++|+||+|++|.+.++.+...|++|+++++ ++++.+.+.+++   +.. .  ..|..+..++.+.+.+...  ++
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK   85 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999999999999999999899999999998 766655443232   322 1  2344443133333332211  36


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|++++++|
T Consensus        86 id~li~~Ag   94 (261)
T 1gee_A           86 LDVMINNAG   94 (261)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=97.87  E-value=1.7e-05  Score=60.11  Aligned_cols=97  Identities=15%  Similarity=0.114  Sum_probs=64.0

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHcCCC-eeecCCCchhHHHHHHHHCCCCccEEEeCC
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEPDLDAALKRYFPEGINIYFENV  129 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g-~~v~~~~~~~~~~~~~~~~~g~~-~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~  129 (241)
                      ..+|+|+||+|++|..+++.+...| ++|+++++++++.+.+. ..+.. ...|..+..++.+.+.     ++|+||++.
T Consensus        23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~-----~~D~vv~~a   96 (236)
T 3qvo_A           23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPY-PTNSQIIMGDVLNHAALKQAMQ-----GQDIVYANL   96 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSC-CTTEEEEECCTTCHHHHHHHHT-----TCSEEEEEC
T ss_pred             ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccc-cCCcEEEEecCCCHHHHHHHhc-----CCCEEEEcC
Confidence            3579999999999999999999999 79999999877654332 11221 1234444312322222     589999998


Q ss_pred             Cchh----HHHHHHhhcc--CCEEEEEeeec
Q 026217          130 GGKM----LDAVLLNMRI--QGRITLCGMIS  154 (241)
Q Consensus       130 g~~~----~~~~~~~l~~--~G~~v~~g~~~  154 (241)
                      +...    .+.+++.++.  .++++.++...
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~iV~iSS~~  127 (236)
T 3qvo_A           97 TGEDLDIQANSVIAAMKACDVKRLIFVLSLG  127 (236)
T ss_dssp             CSTTHHHHHHHHHHHHHHTTCCEEEEECCCC
T ss_pred             CCCchhHHHHHHHHHHHHcCCCEEEEEecce
Confidence            8532    3445555544  36899887644

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=97.87  E-value=0.00013  Score=57.04  Aligned_cols=76  Identities=20%  Similarity=0.203  Sum_probs=54.4

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----CCC-eeecCCCchhHHHHHHHHCCCCccE
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF----GFD-EAFNYKEEPDLDAALKRYFPEGINI  124 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~----g~~-~~i~~~~~~~~~~~i~~~~~~~~d~  124 (241)
                      -++.+++|+||+|++|.+++..+...|++|+++.+++++.+.+.+++    +.. ...|..+.    +.+.+... .+|+
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~----~~~~~~~~-~~Dv  191 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADD----ASRAEAVK-GAHF  191 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSH----HHHHHHTT-TCSE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCH----HHHHHHHH-hCCE
Confidence            36789999999999999999999999999999999987766554343    322 22344432    22333322 4899


Q ss_pred             EEeCCC
Q 026217          125 YFENVG  130 (241)
Q Consensus       125 v~d~~g  130 (241)
                      +++++|
T Consensus       192 lVn~ag  197 (287)
T 1lu9_A          192 VFTAGA  197 (287)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999997

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=97.86  E-value=6.2e-05  Score=58.18  Aligned_cols=80  Identities=16%  Similarity=0.257  Sum_probs=54.0

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHH---cCCC---eeecCCCchhHHHHHHHHCC--CC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKDKVDLLKNK---FGFD---EAFNYKEEPDLDAALKRYFP--EG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~-~~~~~~~~~~~---~g~~---~~i~~~~~~~~~~~i~~~~~--~~  121 (241)
                      .+.+++|+||+|++|...++.+...|++|+++++ ++++.+.+.++   .+..   ...|..+..++...+.+...  ++
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   99 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGG   99 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            4678999999999999999999999999999998 66655444322   3432   12344443233333332211  36


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|++++++|
T Consensus       100 ~d~vi~~Ag  108 (274)
T 1ja9_A          100 LDFVMSNSG  108 (274)
T ss_dssp             EEEEECCCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=97.86  E-value=9.5e-05  Score=57.54  Aligned_cols=80  Identities=16%  Similarity=0.210  Sum_probs=53.2

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC------------HHHHHHHHH---HcCCCe---eecCCCchhHHH
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS------------KDKVDLLKN---KFGFDE---AFNYKEEPDLDA  112 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~------------~~~~~~~~~---~~g~~~---~i~~~~~~~~~~  112 (241)
                      .+.+++|+||++++|.+.++.+...|++|++++++            .++.+...+   ..+...   ..|..+..++..
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   88 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALES   88 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence            57899999999999999999999999999999986            444333321   334321   234444323333


Q ss_pred             HHHHHCC--CCccEEEeCCC
Q 026217          113 ALKRYFP--EGINIYFENVG  130 (241)
Q Consensus       113 ~i~~~~~--~~~d~v~d~~g  130 (241)
                      .+.+...  +++|++++++|
T Consensus        89 ~~~~~~~~~g~id~lv~nAg  108 (281)
T 3s55_A           89 FVAEAEDTLGGIDIAITNAG  108 (281)
T ss_dssp             HHHHHHHHHTCCCEEEECCC
T ss_pred             HHHHHHHhcCCCCEEEECCC
Confidence            2322211  36999999987

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.86  E-value=0.00036  Score=48.25  Aligned_cols=93  Identities=17%  Similarity=0.129  Sum_probs=65.3

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeee-cCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAF-NYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i-~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      .++|+|.|+ |.+|..+++.++..|.+|+++++++++.+.++ +.|...+. |..+. +   .+.+..-.++|.++-+++
T Consensus         7 ~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~-~~g~~~i~gd~~~~-~---~l~~a~i~~ad~vi~~~~   80 (140)
T 3fwz_A            7 CNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELR-ERGVRAVLGNAANE-E---IMQLAHLECAKWLILTIP   80 (140)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH-HTTCEEEESCTTSH-H---HHHHTTGGGCSEEEECCS
T ss_pred             CCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH-HcCCCEEECCCCCH-H---HHHhcCcccCCEEEEECC
Confidence            467999996 99999999999999999999999999999998 77775432 33332 2   233222227999999999


Q ss_pred             chh----HHHHHHhhccCCEEEEE
Q 026217          131 GKM----LDAVLLNMRIQGRITLC  150 (241)
Q Consensus       131 ~~~----~~~~~~~l~~~G~~v~~  150 (241)
                      .+.    .-...+.+.+..+++..
T Consensus        81 ~~~~n~~~~~~a~~~~~~~~iiar  104 (140)
T 3fwz_A           81 NGYEAGEIVASARAKNPDIEIIAR  104 (140)
T ss_dssp             CHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred             ChHHHHHHHHHHHHHCCCCeEEEE
Confidence            642    22334445556665543

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=97.86  E-value=4.3e-05  Score=59.17  Aligned_cols=80  Identities=16%  Similarity=0.238  Sum_probs=53.3

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHH---HcCCCe---eecCCCchhHHHHHHHHCC--CC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKDKVDLLKN---KFGFDE---AFNYKEEPDLDAALKRYFP--EG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~-~~~~~~~~~~---~~g~~~---~i~~~~~~~~~~~i~~~~~--~~  121 (241)
                      .+.+++|+||++++|.++++.+...|++|+++++ +++..+.+.+   ..+...   ..|..+..++...+.+...  ++
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~  106 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGR  106 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999999887 5555444432   233321   2344443233322322211  37


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|++++++|
T Consensus       107 id~lv~nAg  115 (269)
T 4dmm_A          107 LDVLVNNAG  115 (269)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=97.86  E-value=5.7e-05  Score=57.32  Aligned_cols=75  Identities=13%  Similarity=0.247  Sum_probs=52.2

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe-eecCCCchhHHHHHHHHCC--CCccEEEeC
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFP--EGINIYFEN  128 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~i~~~~~--~~~d~v~d~  128 (241)
                      +.+++|+||+|++|.+.++.+...|++|+++++++++  ..+ +++... ..|..+. ++...+.+...  +++|+++++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~--~~~-~~~~~~~~~D~~~~-~~~~~~~~~~~~~g~id~lv~~   77 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE--AAQ-SLGAVPLPTDLEKD-DPKGLVKRALEALGGLHVLVHA   77 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH--HHH-HHTCEEEECCTTTS-CHHHHHHHHHHHHTSCCEEEEC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHH-hhCcEEEecCCchH-HHHHHHHHHHHHcCCCCEEEEC
Confidence            4689999999999999999999999999999988766  233 555321 2233332 43333332211  369999999


Q ss_pred             CC
Q 026217          129 VG  130 (241)
Q Consensus       129 ~g  130 (241)
                      +|
T Consensus        78 Ag   79 (239)
T 2ekp_A           78 AA   79 (239)
T ss_dssp             CC
T ss_pred             CC
Confidence            87

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=97.85  E-value=7e-05  Score=56.89  Aligned_cols=79  Identities=11%  Similarity=0.130  Sum_probs=54.2

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCC-------EEEEEeCCHHHHHHHHHHc---CCC---eeecCCCchhHHHHHHHHC
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGC-------YVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEPDLDAALKRYF  118 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~-------~v~~~~~~~~~~~~~~~~~---g~~---~~i~~~~~~~~~~~i~~~~  118 (241)
                      +.+++|+||+|++|...++.+...|+       +|+++++++++.+.+.+++   +..   ...|..+...+...+.+..
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   81 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence            56899999999999999998888898       9999999988776655343   321   1234444312333332221


Q ss_pred             --CCCccEEEeCCC
Q 026217          119 --PEGINIYFENVG  130 (241)
Q Consensus       119 --~~~~d~v~d~~g  130 (241)
                        -+++|++++++|
T Consensus        82 ~~~g~id~li~~Ag   95 (244)
T 2bd0_A           82 ERYGHIDCLVNNAG   95 (244)
T ss_dssp             HHTSCCSEEEECCC
T ss_pred             HhCCCCCEEEEcCC
Confidence              136999999987

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.85  E-value=9e-06  Score=61.67  Aligned_cols=100  Identities=18%  Similarity=0.130  Sum_probs=62.5

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHH---HHHHHHCC-CCccEEEe
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLD---AALKRYFP-EGINIYFE  127 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~---~~i~~~~~-~~~d~v~d  127 (241)
                      +.+++|+||+|++|.+.++.+...|++|+++++++++.+.   .. .....|..+..++.   +++.+..+ +++|++++
T Consensus         3 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~---~~-~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~   78 (236)
T 1ooe_A            3 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQAD---SN-ILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFC   78 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSS---EE-EECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCcccccc---cc-EEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEEE
Confidence            5689999999999999999999999999999987654220   00 00112332221222   22322222 47999999


Q ss_pred             CCCc--------h----h---------------HHHHHHhhccCCEEEEEeeecc
Q 026217          128 NVGG--------K----M---------------LDAVLLNMRIQGRITLCGMISQ  155 (241)
Q Consensus       128 ~~g~--------~----~---------------~~~~~~~l~~~G~~v~~g~~~~  155 (241)
                      ++|.        +    .               .+.+...+..+|+++.+++...
T Consensus        79 ~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~  133 (236)
T 1ooe_A           79 VAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAA  133 (236)
T ss_dssp             CCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred             CCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhh
Confidence            9982        1    0               1233344545689999887544

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=97.85  E-value=6.4e-05  Score=57.09  Aligned_cols=78  Identities=15%  Similarity=0.193  Sum_probs=52.1

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHH---cCCC----eeecCCCchhHHHHHHHHCC--CCc
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGS-AGSKDKVDLLKNK---FGFD----EAFNYKEEPDLDAALKRYFP--EGI  122 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~-~~~~~~~~~~~~~---~g~~----~~i~~~~~~~~~~~i~~~~~--~~~  122 (241)
                      .+++|+||+|++|...++.+...|++|+++ ++++++.+.+.++   .+..    ...|..+..++...+.+...  +++
T Consensus         2 k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   81 (245)
T 2ph3_A            2 RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGGL   81 (245)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTCC
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCCC
Confidence            579999999999999999999999999998 7787766554323   2332    11244443123222222211  369


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |++++++|
T Consensus        82 d~li~~Ag   89 (245)
T 2ph3_A           82 DTLVNNAG   89 (245)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=97.85  E-value=3.3e-05  Score=60.29  Aligned_cols=95  Identities=12%  Similarity=0.098  Sum_probs=63.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHcCCCe-eecCCCchhHHHHHHHHCCCCccEEEeCCCc
Q 026217           54 YVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFENVGG  131 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~-g~~v~~~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~  131 (241)
                      +|||+||+|.+|...++.+... |.+|+++++++++...+. ..+... ..|..+.    +.+.+... ++|+||.+++.
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~-~~~v~~~~~D~~d~----~~l~~~~~-~~d~vi~~a~~   75 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDW-RGKVSVRQLDYFNQ----ESMVEAFK-GMDTVVFIPSI   75 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGG-BTTBEEEECCTTCH----HHHHHHTT-TCSEEEECCCC
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhh-hCCCEEEEcCCCCH----HHHHHHHh-CCCEEEEeCCC
Confidence            4899999999999999988877 899999999887655443 334322 2355443    23333332 59999999884


Q ss_pred             --------hhHHHHHHhhccC--CEEEEEeeec
Q 026217          132 --------KMLDAVLLNMRIQ--GRITLCGMIS  154 (241)
Q Consensus       132 --------~~~~~~~~~l~~~--G~~v~~g~~~  154 (241)
                              .....+++.++..  ++++.++...
T Consensus        76 ~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~  108 (289)
T 3e48_A           76 IHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYA  108 (289)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred             CccchhhHHHHHHHHHHHHHcCCCEEEEEcccC
Confidence                    1233455555543  4888887743

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=97.84  E-value=5.9e-05  Score=58.62  Aligned_cols=80  Identities=14%  Similarity=0.160  Sum_probs=53.5

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-------------CHHHHHHHHH---HcCCCe---eecCCCchhHH
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG-------------SKDKVDLLKN---KFGFDE---AFNYKEEPDLD  111 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~-------------~~~~~~~~~~---~~g~~~---~i~~~~~~~~~  111 (241)
                      .+.+++|+||++++|.+.++.+...|++|+++++             +.++.+.+.+   ..+...   ..|..+..++.
T Consensus        10 ~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (277)
T 3tsc_A           10 EGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLR   89 (277)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            5789999999999999999999999999999987             4555444332   223221   23444432333


Q ss_pred             HHHHHHCC--CCccEEEeCCC
Q 026217          112 AALKRYFP--EGINIYFENVG  130 (241)
Q Consensus       112 ~~i~~~~~--~~~d~v~d~~g  130 (241)
                      ..+.+...  +++|++++++|
T Consensus        90 ~~~~~~~~~~g~id~lvnnAg  110 (277)
T 3tsc_A           90 KVVDDGVAALGRLDIIVANAG  110 (277)
T ss_dssp             HHHHHHHHHHSCCCEEEECCC
T ss_pred             HHHHHHHHHcCCCCEEEECCC
Confidence            33332211  36999999997

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=97.84  E-value=8e-05  Score=58.32  Aligned_cols=45  Identities=16%  Similarity=0.119  Sum_probs=38.7

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHHH
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSA-GSKDKVDLLKNK   95 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~-~~~~~~~~~~~~   95 (241)
                      .+.+++|+||++++|.+.++.+...|++|++++ +++++.+.+.++
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~   53 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSAT   53 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH
Confidence            467899999999999999999999999999999 998776655433

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=97.84  E-value=7.6e-05  Score=59.42  Aligned_cols=80  Identities=18%  Similarity=0.307  Sum_probs=52.6

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHH---HcCCC---eeecCCCchhHHHHHHHHCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS-----KDKVDLLKN---KFGFD---EAFNYKEEPDLDAALKRYFP  119 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~-----~~~~~~~~~---~~g~~---~~i~~~~~~~~~~~i~~~~~  119 (241)
                      ++.+++|+||+|++|.+.++.+...|++|++++++     +++.+.+.+   ..+..   ...|..+..++...+.+...
T Consensus         4 ~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~   83 (324)
T 3u9l_A            4 SKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIG   83 (324)
T ss_dssp             -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999998765     334443331   23332   12344443233333333221


Q ss_pred             --CCccEEEeCCC
Q 026217          120 --EGINIYFENVG  130 (241)
Q Consensus       120 --~~~d~v~d~~g  130 (241)
                        +++|++++++|
T Consensus        84 ~~g~iD~lVnnAG   96 (324)
T 3u9l_A           84 EDGRIDVLIHNAG   96 (324)
T ss_dssp             HHSCCSEEEECCC
T ss_pred             HcCCCCEEEECCC
Confidence              37999999998

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=97.84  E-value=0.0001  Score=57.95  Aligned_cols=80  Identities=14%  Similarity=0.193  Sum_probs=53.5

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC------------HHHHHHHHH---HcCCCe---eecCCCchhHHH
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS------------KDKVDLLKN---KFGFDE---AFNYKEEPDLDA  112 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~------------~~~~~~~~~---~~g~~~---~i~~~~~~~~~~  112 (241)
                      .+.+++|+||++++|.+.++.+...|++|++++++            +++.+.+.+   ..+...   ..|..+..++..
T Consensus        27 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~  106 (299)
T 3t7c_A           27 EGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQA  106 (299)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHH
Confidence            57899999999999999999999999999999876            454443321   334321   234444323333


Q ss_pred             HHHHHCC--CCccEEEeCCC
Q 026217          113 ALKRYFP--EGINIYFENVG  130 (241)
Q Consensus       113 ~i~~~~~--~~~d~v~d~~g  130 (241)
                      .+.+...  +++|++++++|
T Consensus       107 ~~~~~~~~~g~iD~lv~nAg  126 (299)
T 3t7c_A          107 AVDDGVTQLGRLDIVLANAA  126 (299)
T ss_dssp             HHHHHHHHHSCCCEEEECCC
T ss_pred             HHHHHHHHhCCCCEEEECCC
Confidence            3332211  37999999987

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=97.84  E-value=4.9e-05  Score=58.88  Aligned_cols=80  Identities=24%  Similarity=0.380  Sum_probs=53.1

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHH---HcCCC-e--eecCCCchhHHHHHHHHCC--CC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKDKVDLLKN---KFGFD-E--AFNYKEEPDLDAALKRYFP--EG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~-~~~~~~~~~~---~~g~~-~--~i~~~~~~~~~~~i~~~~~--~~  121 (241)
                      .+.+++|+||+|++|.++++.+...|++|+++++ +++..+.+.+   +.+.. .  ..|..+..++...+.+...  ++
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGG  107 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            5789999999999999999999999999999998 4444443332   33432 1  2244443233333332211  37


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|++++++|
T Consensus       108 id~li~nAg  116 (271)
T 4iin_A          108 LSYLVNNAG  116 (271)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=97.84  E-value=4.3e-05  Score=61.42  Aligned_cols=79  Identities=23%  Similarity=0.357  Sum_probs=54.4

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH-----------HHHHHHHcCCC---eeecCCCchhHHHHHHH
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK-----------VDLLKNKFGFD---EAFNYKEEPDLDAALKR  116 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~-----------~~~~~~~~g~~---~~i~~~~~~~~~~~i~~  116 (241)
                      .|.+++|+||++++|.+.++.+...|++|+++++++++           .+.++ ..|..   ...|..+..++...+.+
T Consensus        44 ~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~-~~g~~~~~~~~Dv~d~~~v~~~~~~  122 (346)
T 3kvo_A           44 AGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIE-AVGGKALPCIVDVRDEQQISAAVEK  122 (346)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHH-HTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHH-hcCCeEEEEEccCCCHHHHHHHHHH
Confidence            57899999999999999999999999999999988653           23333 44432   12355554233333332


Q ss_pred             HCC--CCccEEEeCCC
Q 026217          117 YFP--EGINIYFENVG  130 (241)
Q Consensus       117 ~~~--~~~d~v~d~~g  130 (241)
                      ...  +++|++++++|
T Consensus       123 ~~~~~g~iDilVnnAG  138 (346)
T 3kvo_A          123 AIKKFGGIDILVNNAS  138 (346)
T ss_dssp             HHHHHSCCCEEEECCC
T ss_pred             HHHHcCCCCEEEECCC
Confidence            211  37999999998

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=97.84  E-value=8.5e-05  Score=57.16  Aligned_cols=80  Identities=16%  Similarity=0.216  Sum_probs=53.4

Q ss_pred             CCcEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHHcCCCe--eecCCCchhHHHHHHHHCC--CC
Q 026217           51 QGEYVFVSAAS--GAVGQLVGQFAKLVGCYVVGSAGSKD---KVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFP--EG  121 (241)
Q Consensus        51 ~~~~vlI~ga~--g~~G~~avqla~~~g~~v~~~~~~~~---~~~~~~~~~g~~~--~i~~~~~~~~~~~i~~~~~--~~  121 (241)
                      .+.+++|+||+  |++|.+.++.+...|++|++++++++   ..+.+.++.+...  ..|..+..++...+.+...  ++
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG   86 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            46789999998  99999999988888999999998875   3444442334222  2344443233333322211  36


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|++++++|
T Consensus        87 iD~lv~~Ag   95 (261)
T 2wyu_A           87 LDYLVHAIA   95 (261)
T ss_dssp             EEEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=97.83  E-value=6.4e-05  Score=58.54  Aligned_cols=82  Identities=12%  Similarity=0.116  Sum_probs=54.4

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHH---cCCC---eeecCCCchhHHHHHHHHCC--C
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKDKVDLLKNK---FGFD---EAFNYKEEPDLDAALKRYFP--E  120 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~-~~~~~~~~~~~---~g~~---~~i~~~~~~~~~~~i~~~~~--~  120 (241)
                      ..+.+++|+||++++|.+.++.+...|++|+++++ ++++.+.+.++   .+..   ...|..+..++...+.+...  +
T Consensus        27 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  106 (280)
T 4da9_A           27 KARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFG  106 (280)
T ss_dssp             CCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHS
T ss_pred             cCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            35789999999999999999999999999999985 65554444323   3332   12344443233333332221  3


Q ss_pred             CccEEEeCCCc
Q 026217          121 GINIYFENVGG  131 (241)
Q Consensus       121 ~~d~v~d~~g~  131 (241)
                      ++|++++++|.
T Consensus       107 ~iD~lvnnAg~  117 (280)
T 4da9_A          107 RIDCLVNNAGI  117 (280)
T ss_dssp             CCCEEEEECC-
T ss_pred             CCCEEEECCCc
Confidence            69999999874

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=97.83  E-value=0.00011  Score=57.16  Aligned_cols=80  Identities=16%  Similarity=0.240  Sum_probs=53.7

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC------------HHHHHHHHH---HcCCCe---eecCCCchhHHH
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS------------KDKVDLLKN---KFGFDE---AFNYKEEPDLDA  112 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~------------~~~~~~~~~---~~g~~~---~i~~~~~~~~~~  112 (241)
                      .+.++||+||++++|.+.++.+...|++|++++++            +++.+.+.+   ..+...   ..|..+..++..
T Consensus        12 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   91 (278)
T 3sx2_A           12 TGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSA   91 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence            57899999999999999999999999999999876            554443331   334321   234444323333


Q ss_pred             HHHHHCC--CCccEEEeCCC
Q 026217          113 ALKRYFP--EGINIYFENVG  130 (241)
Q Consensus       113 ~i~~~~~--~~~d~v~d~~g  130 (241)
                      .+.+...  +++|++++++|
T Consensus        92 ~~~~~~~~~g~id~lv~nAg  111 (278)
T 3sx2_A           92 ALQAGLDELGRLDIVVANAG  111 (278)
T ss_dssp             HHHHHHHHHCCCCEEEECCC
T ss_pred             HHHHHHHHcCCCCEEEECCC
Confidence            3332211  37999999998

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=97.83  E-value=3.5e-05  Score=60.27  Aligned_cols=80  Identities=11%  Similarity=0.152  Sum_probs=53.7

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHHHc----CCC---eeecCCC----chhHHHHHHHHC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK-DKVDLLKNKF----GFD---EAFNYKE----EPDLDAALKRYF  118 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~-~~~~~~~~~~----g~~---~~i~~~~----~~~~~~~i~~~~  118 (241)
                      .+.+++|+||+|++|.++++.+...|++|+++++++ ++.+.+.+++    +..   ...|..+    ..++...+.+..
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~  101 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCF  101 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHH
Confidence            467899999999999999999999999999999887 6554443233    322   1234444    312222222221


Q ss_pred             C--CCccEEEeCCC
Q 026217          119 P--EGINIYFENVG  130 (241)
Q Consensus       119 ~--~~~d~v~d~~g  130 (241)
                      .  +++|++++++|
T Consensus       102 ~~~g~iD~lvnnAG  115 (288)
T 2x9g_A          102 RAFGRCDVLVNNAS  115 (288)
T ss_dssp             HHHSCCCEEEECCC
T ss_pred             HhcCCCCEEEECCC
Confidence            1  37999999987

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=97.81  E-value=7.6e-05  Score=57.92  Aligned_cols=77  Identities=13%  Similarity=0.212  Sum_probs=51.9

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC---eeecCCCchhHH---HHHHHHCCCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEPDLD---AALKRYFPEG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~~i~~~~~~~~~---~~i~~~~~~~  121 (241)
                      .+.+++|+||++++|.+.++.+...|++|++++++++..+.+. ++   +..   ...|..+..++.   +.+.+.  ++
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~--g~  106 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVAD-EIADGGGSAEAVVADLADLEGAANVAEELAAT--RR  106 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHH-HHHTTTCEEEEEECCTTCHHHHHHHHHHHHHH--SC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHH-HHHhcCCcEEEEEecCCCHHHHHHHHHHHHhc--CC
Confidence            5789999999999999999999999999999997654433333 33   221   123444431222   222222  47


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|++++++|
T Consensus       107 iD~lv~nAg  115 (273)
T 3uf0_A          107 VDVLVNNAG  115 (273)
T ss_dssp             CCEEEECCC
T ss_pred             CcEEEECCC
Confidence            999999987

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=97.81  E-value=5e-05  Score=59.30  Aligned_cols=79  Identities=20%  Similarity=0.294  Sum_probs=53.3

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH-----------HHHHHHHcCCCe---eecCCCchhHHHHHHH
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK-----------VDLLKNKFGFDE---AFNYKEEPDLDAALKR  116 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~-----------~~~~~~~~g~~~---~i~~~~~~~~~~~i~~  116 (241)
                      .+.+++|+||++++|.+.++.+...|++|+++++++++           .+.++ ..+...   ..|..+..++...+.+
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~   86 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIE-EAGGQALPIVGDIRDGDAVAAAVAK   86 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHH-HHTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHH-hcCCcEEEEECCCCCHHHHHHHHHH
Confidence            46799999999999999999999999999999988652           22333 334321   2244443233332332


Q ss_pred             HCC--CCccEEEeCCC
Q 026217          117 YFP--EGINIYFENVG  130 (241)
Q Consensus       117 ~~~--~~~d~v~d~~g  130 (241)
                      ...  +++|++++++|
T Consensus        87 ~~~~~g~id~lvnnAg  102 (285)
T 3sc4_A           87 TVEQFGGIDICVNNAS  102 (285)
T ss_dssp             HHHHHSCCSEEEECCC
T ss_pred             HHHHcCCCCEEEECCC
Confidence            211  37999999987

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=97.81  E-value=9.6e-05  Score=58.96  Aligned_cols=45  Identities=16%  Similarity=0.119  Sum_probs=39.0

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHHH
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSA-GSKDKVDLLKNK   95 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~-~~~~~~~~~~~~   95 (241)
                      .+.+++|+||++++|.++++.+...|++|++++ +++++.+.+.++
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~   90 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSAT   90 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH
Confidence            567899999999999999999999999999999 988876665533

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=97.81  E-value=0.00018  Score=54.98  Aligned_cols=73  Identities=26%  Similarity=0.322  Sum_probs=51.7

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCee-ecCCCchhHHHHHHHHCCCCccEEEeC
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEA-FNYKEEPDLDAALKRYFPEGINIYFEN  128 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~-i~~~~~~~~~~~i~~~~~~~~d~v~d~  128 (241)
                      -.+.+++|+||+|++|.++++.+...|++|++++++++.   ++ +++.... .|. .. ++...+....  ++|+++++
T Consensus        17 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~---~~-~~~~~~~~~D~-~~-~~~~~~~~~~--~iD~lv~~   88 (249)
T 1o5i_A           17 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEEL---LK-RSGHRYVVCDL-RK-DLDLLFEKVK--EVDILVLN   88 (249)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH---HH-HTCSEEEECCT-TT-CHHHHHHHSC--CCSEEEEC
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHH---HH-hhCCeEEEeeH-HH-HHHHHHHHhc--CCCEEEEC
Confidence            357899999999999999999999999999999988743   33 4442222 233 22 3433333332  69999999


Q ss_pred             CC
Q 026217          129 VG  130 (241)
Q Consensus       129 ~g  130 (241)
                      +|
T Consensus        89 Ag   90 (249)
T 1o5i_A           89 AG   90 (249)
T ss_dssp             CC
T ss_pred             CC
Confidence            87

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=97.79  E-value=0.0001  Score=57.46  Aligned_cols=80  Identities=11%  Similarity=0.165  Sum_probs=53.4

Q ss_pred             CCcEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHHcCCCe--eecCCCchhHHHHHHHHC--CCC
Q 026217           51 QGEYVFVSAAS--GAVGQLVGQFAKLVGCYVVGSAGSKD---KVDLLKNKFGFDE--AFNYKEEPDLDAALKRYF--PEG  121 (241)
Q Consensus        51 ~~~~vlI~ga~--g~~G~~avqla~~~g~~v~~~~~~~~---~~~~~~~~~g~~~--~i~~~~~~~~~~~i~~~~--~~~  121 (241)
                      .+.+++|+||+  |++|.++++.+...|++|++++++++   ..+.+.++.+...  ..|..+..++...+....  -++
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   99 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWGS   99 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46789999998  89999999999999999999998874   3344432334212  234444313332222221  137


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|++++++|
T Consensus       100 iD~lv~~Ag  108 (285)
T 2p91_A          100 LDIIVHSIA  108 (285)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=97.79  E-value=7.4e-05  Score=56.85  Aligned_cols=80  Identities=19%  Similarity=0.288  Sum_probs=51.1

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHH---HcCCC-e--eecCCCchhHHHHHHHHCC--CC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGS-AGSKDKVDLLKN---KFGFD-E--AFNYKEEPDLDAALKRYFP--EG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~-~~~~~~~~~~~~---~~g~~-~--~i~~~~~~~~~~~i~~~~~--~~  121 (241)
                      .+.+++|+||+|++|...++.+...|++|+++ .+++++.+.+.+   ..+.. .  ..|..+..++...+.+...  ++
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGR   83 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            46789999999999999999999999999998 555544443321   23432 1  2344443133333322211  36


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|++++++|
T Consensus        84 ~d~vi~~Ag   92 (247)
T 2hq1_A           84 IDILVNNAG   92 (247)
T ss_dssp             CCEEEECC-
T ss_pred             CCEEEECCC
Confidence            999999987

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=97.79  E-value=8e-05  Score=59.17  Aligned_cols=79  Identities=22%  Similarity=0.263  Sum_probs=52.9

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEe---------CCHHHHHHHHHH---cCCCeeecCCCchhHHHH---HH
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSA---------GSKDKVDLLKNK---FGFDEAFNYKEEPDLDAA---LK  115 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~---------~~~~~~~~~~~~---~g~~~~i~~~~~~~~~~~---i~  115 (241)
                      .+.+++|+||+|++|..+++.+...|++|++++         ++.++.+.+.++   .+...+.|..+..++...   +.
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~~~~   87 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL   87 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHHHH
Confidence            467999999999999999999999999999964         344544433222   333334555554233333   33


Q ss_pred             HHCCCCccEEEeCCC
Q 026217          116 RYFPEGINIYFENVG  130 (241)
Q Consensus       116 ~~~~~~~d~v~d~~g  130 (241)
                      +.. +++|++++++|
T Consensus        88 ~~~-g~iD~lVnnAG  101 (319)
T 1gz6_A           88 DTF-GRIDVVVNNAG  101 (319)
T ss_dssp             HHT-SCCCEEEECCC
T ss_pred             HHc-CCCCEEEECCC
Confidence            222 37999999987

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=97.78  E-value=3.5e-05  Score=57.87  Aligned_cols=94  Identities=14%  Similarity=0.139  Sum_probs=61.0

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC-eeecCCCchhHHHHHHHHCCCCccEEEeCCCc
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEPDLDAALKRYFPEGINIYFENVGG  131 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~-~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~  131 (241)
                      .+|+|+||+|.+|...++.+...|.+|+++++++++.+.+.  -+.. ...|..+..++.+.+.     ++|+||+++|.
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~-----~~d~vi~~a~~   77 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIEN--EHLKVKKADVSSLDEVCEVCK-----GADAVISAFNP   77 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCC--TTEEEECCCTTCHHHHHHHHT-----TCSEEEECCCC
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhcc--CceEEEEecCCCHHHHHHHhc-----CCCEEEEeCcC
Confidence            47999999999999999999999999999999877653221  1111 1223433312322222     59999999984


Q ss_pred             h------------hHHHHHHhhccC--CEEEEEeee
Q 026217          132 K------------MLDAVLLNMRIQ--GRITLCGMI  153 (241)
Q Consensus       132 ~------------~~~~~~~~l~~~--G~~v~~g~~  153 (241)
                      .            ....+++.+...  .+++.++..
T Consensus        78 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~  113 (227)
T 3dhn_A           78 GWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGA  113 (227)
T ss_dssp             ------CCSHHHHHHHHHHHHHHHTTCSEEEEECCS
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCCh
Confidence            2            123344445443  488888764

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=97.78  E-value=8.2e-05  Score=57.42  Aligned_cols=81  Identities=14%  Similarity=0.235  Sum_probs=54.3

Q ss_pred             CCCCcEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCHHHHHHH---HHHcCCCe--eecCCCchhHHH---HHHHHC
Q 026217           49 PKQGEYVFVSAAS--GAVGQLVGQFAKLVGCYVVGSAGSKDKVDLL---KNKFGFDE--AFNYKEEPDLDA---ALKRYF  118 (241)
Q Consensus        49 ~~~~~~vlI~ga~--g~~G~~avqla~~~g~~v~~~~~~~~~~~~~---~~~~g~~~--~i~~~~~~~~~~---~i~~~~  118 (241)
                      ..++.+++|+||+  +++|.+.++.+...|++|++++++++..+.+   .++.+...  ..|..+..++..   .+.+..
T Consensus        11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   90 (271)
T 3ek2_A           11 FLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHW   90 (271)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHc
Confidence            3467899999998  9999999999999999999999875433333   22344322  234444322332   333322


Q ss_pred             CCCccEEEeCCC
Q 026217          119 PEGINIYFENVG  130 (241)
Q Consensus       119 ~~~~d~v~d~~g  130 (241)
                       +++|++++++|
T Consensus        91 -g~id~lv~nAg  101 (271)
T 3ek2_A           91 -DSLDGLVHSIG  101 (271)
T ss_dssp             -SCEEEEEECCC
T ss_pred             -CCCCEEEECCc
Confidence             37999999987

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=97.77  E-value=0.00013  Score=56.51  Aligned_cols=79  Identities=24%  Similarity=0.295  Sum_probs=52.8

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH-------H----HHHHHHcCCC---eeecCCCchhHHHHHHH
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK-------V----DLLKNKFGFD---EAFNYKEEPDLDAALKR  116 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~-------~----~~~~~~~g~~---~~i~~~~~~~~~~~i~~  116 (241)
                      .+.+++|+||++++|.+.++.+...|++|+++++++++       .    +.++ ..+..   ...|..+..++...+.+
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~   83 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVN-AAGGQGLALKCDIREEDQVRAAVAA   83 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHH-HHTSEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHH-hcCCeEEEEeCCCCCHHHHHHHHHH
Confidence            46899999999999999999999999999999987542       2    2222 33432   12344443233332332


Q ss_pred             HCC--CCccEEEeCCC
Q 026217          117 YFP--EGINIYFENVG  130 (241)
Q Consensus       117 ~~~--~~~d~v~d~~g  130 (241)
                      ...  +++|++++++|
T Consensus        84 ~~~~~g~iD~lvnnAG   99 (274)
T 3e03_A           84 TVDTFGGIDILVNNAS   99 (274)
T ss_dssp             HHHHHSCCCEEEECCC
T ss_pred             HHHHcCCCCEEEECCC
Confidence            211  37999999998

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=97.77  E-value=0.00013  Score=57.84  Aligned_cols=80  Identities=19%  Similarity=0.235  Sum_probs=53.3

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC------------HHHHHHHHH---HcCCCe---eecCCCchhHHH
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS------------KDKVDLLKN---KFGFDE---AFNYKEEPDLDA  112 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~------------~~~~~~~~~---~~g~~~---~i~~~~~~~~~~  112 (241)
                      .+.+++|+||++++|.++++.+...|++|++++++            .++.+.+.+   ..+...   ..|..+..++..
T Consensus        45 ~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~  124 (317)
T 3oec_A           45 QGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQA  124 (317)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence            57899999999999999999999999999999865            444433321   334321   234444323333


Q ss_pred             HHHHHCC--CCccEEEeCCC
Q 026217          113 ALKRYFP--EGINIYFENVG  130 (241)
Q Consensus       113 ~i~~~~~--~~~d~v~d~~g  130 (241)
                      .+.+...  +++|++++++|
T Consensus       125 ~~~~~~~~~g~iD~lVnnAg  144 (317)
T 3oec_A          125 VVDEALAEFGHIDILVSNVG  144 (317)
T ss_dssp             HHHHHHHHHSCCCEEEECCC
T ss_pred             HHHHHHHHcCCCCEEEECCC
Confidence            3332211  37999999987

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=97.76  E-value=0.00011  Score=55.82  Aligned_cols=79  Identities=23%  Similarity=0.324  Sum_probs=52.5

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHH---cCCC---eeecCCCchhHHHHHHHHC--CCCc
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGS-AGSKDKVDLLKNK---FGFD---EAFNYKEEPDLDAALKRYF--PEGI  122 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~-~~~~~~~~~~~~~---~g~~---~~i~~~~~~~~~~~i~~~~--~~~~  122 (241)
                      |.+++|+||+|++|...++.+...|++|+++ .+++++.+.+.++   .+..   ...|..+..++...+.+..  -+++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999999999999985 7777765544322   2332   1234444323333333221  1369


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |++++++|
T Consensus        81 d~li~~Ag   88 (244)
T 1edo_A           81 DVVVNNAG   88 (244)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=97.76  E-value=7.9e-05  Score=54.83  Aligned_cols=96  Identities=13%  Similarity=0.112  Sum_probs=61.6

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe-eecCCCchhHHHHHHHHCCCCccEEEeCCCc
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFENVGG  131 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~  131 (241)
                      .+|+|+||+|.+|...++.+...|.+|+++++++++.+... .-+... ..|..+...+.+.+    . ++|+|+++++.
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~----~-~~d~vi~~a~~   77 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG-PRPAHVVVGDVLQAADVDKTV----A-GQDAVIVLLGT   77 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS-CCCSEEEESCTTSHHHHHHHH----T-TCSEEEECCCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccccc-CCceEEEEecCCCHHHHHHHH----c-CCCEEEECccC
Confidence            58999999999999999999999999999999876543221 112211 22333331222222    2 48999999984


Q ss_pred             hh-----------HHHHHHhhcc--CCEEEEEeeec
Q 026217          132 KM-----------LDAVLLNMRI--QGRITLCGMIS  154 (241)
Q Consensus       132 ~~-----------~~~~~~~l~~--~G~~v~~g~~~  154 (241)
                      ..           ...+++.+..  -++++.++...
T Consensus        78 ~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~  113 (206)
T 1hdo_A           78 RNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAF  113 (206)
T ss_dssp             TTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGG
T ss_pred             CCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeeee
Confidence            21           2344444443  35888887654

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=97.76  E-value=4.2e-05  Score=58.66  Aligned_cols=77  Identities=14%  Similarity=0.047  Sum_probs=51.8

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH--HcCCC-eeecCCCchhHHHHHHHHCCCCccEEEeCC
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN--KFGFD-EAFNYKEEPDLDAALKRYFPEGINIYFENV  129 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~--~~g~~-~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~  129 (241)
                      .+++|+||+|++|.++++.+...|++|+++++++++.+.+.+  ..+.. ..+|..+-..+.+.+.+.. +++|++++++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~d~~~v~~~~~~~~~~~-g~iD~lv~nA   80 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAY-GQVDVLVSND   80 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHH-SCCCEEEEEC
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEECHHHHHHHHHHHHHHh-CCCCEEEECC
Confidence            369999999999999999999999999999988776555431  22432 1223322112333333322 3699999998


Q ss_pred             C
Q 026217          130 G  130 (241)
Q Consensus       130 g  130 (241)
                      |
T Consensus        81 g   81 (254)
T 1zmt_A           81 I   81 (254)
T ss_dssp             C
T ss_pred             C
Confidence            7

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=97.75  E-value=3.6e-05  Score=59.63  Aligned_cols=77  Identities=18%  Similarity=0.175  Sum_probs=51.6

Q ss_pred             CCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC-eeecCCCchhHHHHHHHHCC--CCccEE
Q 026217           49 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEPDLDAALKRYFP--EGINIY  125 (241)
Q Consensus        49 ~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~-~~i~~~~~~~~~~~i~~~~~--~~~d~v  125 (241)
                      -..+.++||+||++++|.+.++.+...|++|++++++++...    . ... ...|..+..++...+.+...  +++|++
T Consensus        11 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~----~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l   85 (269)
T 3vtz_A           11 EFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV----N-VSDHFKIDVTNEEEVKEAVEKTTKKYGRIDIL   85 (269)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT----T-SSEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc----C-ceeEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            356889999999999999999999999999999998765432    1 111 12344443233333332211  379999


Q ss_pred             EeCCC
Q 026217          126 FENVG  130 (241)
Q Consensus       126 ~d~~g  130 (241)
                      ++++|
T Consensus        86 v~nAg   90 (269)
T 3vtz_A           86 VNNAG   90 (269)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99997

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=97.74  E-value=9.6e-05  Score=56.64  Aligned_cols=79  Identities=15%  Similarity=0.286  Sum_probs=51.9

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHHcCCCe---eecCCCchhHHHHHHHHCC--CCcc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK--VDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGIN  123 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~--~~~~~~~~g~~~---~i~~~~~~~~~~~i~~~~~--~~~d  123 (241)
                      .+.+++|+||+|++|.+.++.+...|++|+++++++++  .+.++ ..+...   ..|..+..++...+.+...  +++|
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~-~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIA-RHGVKAVHHPADLSDVAQIEALFALAEREFGGVD   81 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHH-TTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHH-hcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            46789999999999999999999999999999987641  22232 234321   2344443233333332211  3699


Q ss_pred             EEEeCCC
Q 026217          124 IYFENVG  130 (241)
Q Consensus       124 ~v~d~~g  130 (241)
                      ++++++|
T Consensus        82 ~lv~~Ag   88 (255)
T 2q2v_A           82 ILVNNAG   88 (255)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999987

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=97.74  E-value=0.00015  Score=55.46  Aligned_cols=80  Identities=16%  Similarity=0.171  Sum_probs=52.4

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCH--HHHHHHHHHc-CCC-e--eecCCCc-hhHHHHHHHHCC--C
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCY-VVGSAGSK--DKVDLLKNKF-GFD-E--AFNYKEE-PDLDAALKRYFP--E  120 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~-v~~~~~~~--~~~~~~~~~~-g~~-~--~i~~~~~-~~~~~~i~~~~~--~  120 (241)
                      .+.+++|+||+|++|.++++.+...|++ |+++++++  +..+.+.+.. +.. .  ..|..+. .++...+.+...  +
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   83 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcC
Confidence            4678999999999999999999999995 99988875  3445554232 211 1  2344432 133333332211  3


Q ss_pred             CccEEEeCCC
Q 026217          121 GINIYFENVG  130 (241)
Q Consensus       121 ~~d~v~d~~g  130 (241)
                      ++|++++++|
T Consensus        84 ~id~lv~~Ag   93 (254)
T 1sby_A           84 TVDILINGAG   93 (254)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCc
Confidence            6999999998

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=97.74  E-value=9.3e-05  Score=56.43  Aligned_cols=80  Identities=20%  Similarity=0.295  Sum_probs=52.3

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHH---HcCCCe---eecCCCchhHHHHHHHHCC--CC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKDKVDLLKN---KFGFDE---AFNYKEEPDLDAALKRYFP--EG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~-~~~~~~~~~~---~~g~~~---~i~~~~~~~~~~~i~~~~~--~~  121 (241)
                      .+.+++|+||+|++|.+.++.+...|++|+++++ ++++.+.+.+   ..+...   ..|..+..++...+.+...  ++
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   82 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGS   82 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4578999999999999999999999999988876 4454444332   234321   2344443233333332211  36


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|++++++|
T Consensus        83 id~lv~nAg   91 (246)
T 3osu_A           83 LDVLVNNAG   91 (246)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=97.73  E-value=0.00014  Score=56.58  Aligned_cols=80  Identities=10%  Similarity=0.231  Sum_probs=55.1

Q ss_pred             CCCcEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHHHHcCCCe--eecCCCchhHHH---HHHHHCCC
Q 026217           50 KQGEYVFVSAAS--GAVGQLVGQFAKLVGCYVVGSAGSK--DKVDLLKNKFGFDE--AFNYKEEPDLDA---ALKRYFPE  120 (241)
Q Consensus        50 ~~~~~vlI~ga~--g~~G~~avqla~~~g~~v~~~~~~~--~~~~~~~~~~g~~~--~i~~~~~~~~~~---~i~~~~~~  120 (241)
                      -.+.+++|+||+  +++|.+.++.+...|++|++++++.  +..+.+.++.+...  ..|..+..++..   .+.+.. +
T Consensus        24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g  102 (280)
T 3nrc_A           24 LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVW-D  102 (280)
T ss_dssp             TTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHC-S
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHc-C
Confidence            357899999998  5699999999999999999999887  56666653444322  234444323333   333222 3


Q ss_pred             CccEEEeCCC
Q 026217          121 GINIYFENVG  130 (241)
Q Consensus       121 ~~d~v~d~~g  130 (241)
                      ++|++++++|
T Consensus       103 ~id~li~nAg  112 (280)
T 3nrc_A          103 GLDAIVHSIA  112 (280)
T ss_dssp             SCCEEEECCC
T ss_pred             CCCEEEECCc
Confidence            7999999987

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.73  E-value=8.5e-05  Score=56.46  Aligned_cols=79  Identities=18%  Similarity=0.204  Sum_probs=55.2

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHc-CCC-e--eecCCCchhHHHHHH---HHCCC-
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKNKF-GFD-E--AFNYKEEPDLDAALK---RYFPE-  120 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g--~~v~~~~~~~~~~~~~~~~~-g~~-~--~i~~~~~~~~~~~i~---~~~~~-  120 (241)
                      .+.+++|+||+|++|..+++.+...|  ++|+++++++++.+.++ +. +.. .  ..|..+...+...+.   +..+. 
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   80 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELK-SIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHH-TCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHH-hccCCceEEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence            35789999999999999999999999  99999999988777776 54 221 1  234444312322222   22221 


Q ss_pred             CccEEEeCCC
Q 026217          121 GINIYFENVG  130 (241)
Q Consensus       121 ~~d~v~d~~g  130 (241)
                      ++|++|+++|
T Consensus        81 ~id~li~~Ag   90 (250)
T 1yo6_A           81 GLSLLINNAG   90 (250)
T ss_dssp             CCCEEEECCC
T ss_pred             CCcEEEECCc
Confidence            6999999987

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=97.73  E-value=9.5e-05  Score=56.84  Aligned_cols=80  Identities=13%  Similarity=0.130  Sum_probs=52.2

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH----HHHHHcCCC---eeecCCCchhHHHHHHHHC--CCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVD----LLKNKFGFD---EAFNYKEEPDLDAALKRYF--PEG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~----~~~~~~g~~---~~i~~~~~~~~~~~i~~~~--~~~  121 (241)
                      .+.+++|+||+|++|...++.+...|++|++++++.++..    .+.++.+..   ...|..+..++...+.+..  -++
T Consensus        13 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   92 (265)
T 1h5q_A           13 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP   92 (265)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            4678999999999999999999999999999998544322    222123432   1234444323333333221  136


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|++++++|
T Consensus        93 id~li~~Ag  101 (265)
T 1h5q_A           93 ISGLIANAG  101 (265)
T ss_dssp             EEEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=97.73  E-value=0.00014  Score=56.27  Aligned_cols=81  Identities=19%  Similarity=0.191  Sum_probs=53.7

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHH---cCCC-e--eecCCCchhHHHHHHHHCC--C
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGS-AGSKDKVDLLKNK---FGFD-E--AFNYKEEPDLDAALKRYFP--E  120 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~-~~~~~~~~~~~~~---~g~~-~--~i~~~~~~~~~~~i~~~~~--~  120 (241)
                      .++.+++|+||+|++|.++++.+...|++|+++ .++++..+.+.++   .+.. .  ..|..+..++...+.+...  +
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  103 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFG  103 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            457899999999999999999999999999777 6666665544422   2332 1  2244443233333332211  3


Q ss_pred             CccEEEeCCC
Q 026217          121 GINIYFENVG  130 (241)
Q Consensus       121 ~~d~v~d~~g  130 (241)
                      ++|++++++|
T Consensus       104 ~id~li~nAg  113 (272)
T 4e3z_A          104 RLDGLVNNAG  113 (272)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6999999987

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=97.72  E-value=0.0002  Score=57.48  Aligned_cols=75  Identities=9%  Similarity=0.154  Sum_probs=54.6

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHc-CC-EEEEEeCCHHHHHHHHHHcCCC--e--eecCCCchhHHHHHHHHCCCCccE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLV-GC-YVVGSAGSKDKVDLLKNKFGFD--E--AFNYKEEPDLDAALKRYFPEGINI  124 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~-g~-~v~~~~~~~~~~~~~~~~~g~~--~--~i~~~~~~~~~~~i~~~~~~~~d~  124 (241)
                      .+.+|||+||+|.+|...++.+... |. +|+++++++.+.+.+.+.+...  .  ..|..+.    +.+.+... ++|+
T Consensus        20 ~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~----~~l~~~~~-~~D~   94 (344)
T 2gn4_A           20 DNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDL----ERLNYALE-GVDI   94 (344)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCH----HHHHHHTT-TCSE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCH----HHHHHHHh-cCCE
Confidence            4678999999999999999888887 98 9999999988877666454321  1  2344443    23333332 5999


Q ss_pred             EEeCCC
Q 026217          125 YFENVG  130 (241)
Q Consensus       125 v~d~~g  130 (241)
                      ||.+++
T Consensus        95 Vih~Aa  100 (344)
T 2gn4_A           95 CIHAAA  100 (344)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999997

>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}

Probab=97.71  E-value=0.00059  Score=51.11  Aligned_cols=101  Identities=12%  Similarity=0.100  Sum_probs=69.4

Q ss_pred             cCCCCCcEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHH---cCCC-eeecCCCchhHHHHHHHHCCC
Q 026217           47 CSPKQGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKNK---FGFD-EAFNYKEEPDLDAALKRYFPE  120 (241)
Q Consensus        47 ~~~~~~~~vlI~ga~g~~G~~avqla~~~--g~~v~~~~~~~~~~~~~~~~---~g~~-~~i~~~~~~~~~~~i~~~~~~  120 (241)
                      .+.+++.+||-.|  .+.|..++.+++.+  +.+|++++.+++..+.+++.   .|.. .-+..... +..+.+....++
T Consensus        52 ~~~~~~~~vLdiG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~g-da~~~l~~~~~~  128 (221)
T 3dr5_A           52 TNGNGSTGAIAIT--PAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLS-RPLDVMSRLAND  128 (221)
T ss_dssp             SCCTTCCEEEEES--TTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECS-CHHHHGGGSCTT
T ss_pred             hCCCCCCCEEEEc--CCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEc-CHHHHHHHhcCC
Confidence            3445566999988  67899999999987  57999999999988877743   3433 21222222 444444333345


Q ss_pred             CccEEEeCCCc----hhHHHHHHhhccCCEEEEE
Q 026217          121 GINIYFENVGG----KMLDAVLLNMRIQGRITLC  150 (241)
Q Consensus       121 ~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~  150 (241)
                      .||+||-....    ..+..+.+.|++||.++.-
T Consensus       129 ~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d  162 (221)
T 3dr5_A          129 SYQLVFGQVSPMDLKALVDAAWPLLRRGGALVLA  162 (221)
T ss_dssp             CEEEEEECCCTTTHHHHHHHHHHHEEEEEEEEET
T ss_pred             CcCeEEEcCcHHHHHHHHHHHHHHcCCCcEEEEe
Confidence            89999854442    3577888999999998873

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=97.71  E-value=7.1e-05  Score=57.28  Aligned_cols=98  Identities=14%  Similarity=0.163  Sum_probs=65.1

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCC--CCccEEEeCC
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFP--EGINIYFENV  129 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~--~~~d~v~d~~  129 (241)
                      +.+++|+||+|++|.+.++.+...|++|+++++++++.+.      ....++..+..++...+.+...  +++|++++++
T Consensus        22 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~------~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~A   95 (251)
T 3orf_A           22 SKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNAD------HSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAA   95 (251)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSS------EEEECSCSSHHHHHHHHHHHHTTTCCEEEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc------cceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            6789999999999999999999999999999988654321      1112233333134333433322  3799999999


Q ss_pred             Cc--------h----h---------------HHHHHHhhccCCEEEEEeeecc
Q 026217          130 GG--------K----M---------------LDAVLLNMRIQGRITLCGMISQ  155 (241)
Q Consensus       130 g~--------~----~---------------~~~~~~~l~~~G~~v~~g~~~~  155 (241)
                      |.        +    .               .+.+...++++|+++.++....
T Consensus        96 g~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~  148 (251)
T 3orf_A           96 GGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAA  148 (251)
T ss_dssp             CCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred             ccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhh
Confidence            72        0    0               1233445556789999887554

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=97.70  E-value=0.00013  Score=56.26  Aligned_cols=80  Identities=15%  Similarity=0.211  Sum_probs=52.1

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHHHc---CCC---eeecCCCchhHHHHHHHHCC--
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK---DKVDLLKNKF---GFD---EAFNYKEEPDLDAALKRYFP--  119 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~---~~~~~~~~~~---g~~---~~i~~~~~~~~~~~i~~~~~--  119 (241)
                      .+.+++|+||++++|.+.++.+...|++|++++++.   ++.+.+.+++   |..   ...|..+..++...+.+...  
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   89 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEF   89 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            568999999999999999999999999999987653   3333333232   322   12344443233322322211  


Q ss_pred             CCccEEEeCCC
Q 026217          120 EGINIYFENVG  130 (241)
Q Consensus       120 ~~~d~v~d~~g  130 (241)
                      +++|++++++|
T Consensus        90 g~iD~lvnnAg  100 (262)
T 3ksu_A           90 GKVDIAINTVG  100 (262)
T ss_dssp             CSEEEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            37999999998

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=97.69  E-value=0.00015  Score=57.69  Aligned_cols=81  Identities=17%  Similarity=0.223  Sum_probs=52.6

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC----------HHHHHHHHH---HcCCCe---eecCCCchhHHHH
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS----------KDKVDLLKN---KFGFDE---AFNYKEEPDLDAA  113 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~----------~~~~~~~~~---~~g~~~---~i~~~~~~~~~~~  113 (241)
                      -.+.+++|+||++++|.+.++.+...|++|++++++          .++.+.+.+   ..+...   ..|..+..++...
T Consensus        25 l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~  104 (322)
T 3qlj_A           25 VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGL  104 (322)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            357899999999999999999999999999999876          333333322   334321   1234443123222


Q ss_pred             HHHHCC--CCccEEEeCCC
Q 026217          114 LKRYFP--EGINIYFENVG  130 (241)
Q Consensus       114 i~~~~~--~~~d~v~d~~g  130 (241)
                      +.+...  +++|++++++|
T Consensus       105 ~~~~~~~~g~iD~lv~nAg  123 (322)
T 3qlj_A          105 IQTAVETFGGLDVLVNNAG  123 (322)
T ss_dssp             HHHHHHHHSCCCEEECCCC
T ss_pred             HHHHHHHcCCCCEEEECCC
Confidence            322211  37999999998

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.69  E-value=0.00026  Score=48.82  Aligned_cols=75  Identities=16%  Similarity=0.167  Sum_probs=53.7

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeee-cCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAF-NYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i-~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      +.+|+|+|+ |.+|...++.+...|.+|+++++++++.+.++ +.+...+. |..+.    +.+.+..-+++|+++.+++
T Consensus         6 ~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~-~~~~~~~~~d~~~~----~~l~~~~~~~~d~vi~~~~   79 (144)
T 2hmt_A            6 NKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA-SYATHAVIANATEE----NELLSLGIRNFEYVIVAIG   79 (144)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTT-TTCSEEEECCTTCH----HHHHTTTGGGCSEEEECCC
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HhCCEEEEeCCCCH----HHHHhcCCCCCCEEEECCC
Confidence            467999997 99999999999999999999999888877766 55543221 22221    2333321136999999999


Q ss_pred             ch
Q 026217          131 GK  132 (241)
Q Consensus       131 ~~  132 (241)
                      ..
T Consensus        80 ~~   81 (144)
T 2hmt_A           80 AN   81 (144)
T ss_dssp             SC
T ss_pred             Cc
Confidence            63

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=97.68  E-value=5e-05  Score=58.54  Aligned_cols=75  Identities=13%  Similarity=0.245  Sum_probs=50.4

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHH---HHHHHHCCCCccEEEe
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLD---AALKRYFPEGINIYFE  127 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~---~~i~~~~~~~~d~v~d  127 (241)
                      .|.+++|+||++++|++.++.+...|++|+++++++++  .+.+.+  ....|..+..+..   +.+.+.. |++|++++
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~--~~~~~~--~~~~Dv~~~~~v~~~~~~~~~~~-G~iDilVn   84 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPE--GLPEEL--FVEADLTTKEGCAIVAEATRQRL-GGVDVIVH   84 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCT--TSCTTT--EEECCTTSHHHHHHHHHHHHHHT-SSCSEEEE
T ss_pred             CCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchh--CCCcEE--EEEcCCCCHHHHHHHHHHHHHHc-CCCCEEEE
Confidence            68999999999999999999999999999999986432  111011  1123444431222   3333322 37999999


Q ss_pred             CCC
Q 026217          128 NVG  130 (241)
Q Consensus       128 ~~g  130 (241)
                      ++|
T Consensus        85 nAG   87 (261)
T 4h15_A           85 MLG   87 (261)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            886

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=97.68  E-value=0.0002  Score=54.36  Aligned_cols=73  Identities=21%  Similarity=0.135  Sum_probs=50.4

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHcCCC-eeecCCCchhHHHHHHHHCCCCccEEEe
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEPDLDAALKRYFPEGINIYFE  127 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~--g~~v~~~~~~~~~~~~~~~~~g~~-~~i~~~~~~~~~~~i~~~~~~~~d~v~d  127 (241)
                      .+.+|+|+||+|.+|...++.+...  |.+|+++++++++.+.+.  -+.. ...|..+..++.+.+    . ++|+||+
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~D~~d~~~~~~~~----~-~~d~vi~   75 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIG--GEADVFIGDITDADSINPAF----Q-GIDALVI   75 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHTT--CCTTEEECCTTSHHHHHHHH----T-TCSEEEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhcC--CCeeEEEecCCCHHHHHHHH----c-CCCEEEE
Confidence            4578999999999999999998888  789999999877654331  1222 123444431232222    2 4999999


Q ss_pred             CCC
Q 026217          128 NVG  130 (241)
Q Consensus       128 ~~g  130 (241)
                      ++|
T Consensus        76 ~a~   78 (253)
T 1xq6_A           76 LTS   78 (253)
T ss_dssp             CCC
T ss_pred             ecc
Confidence            887

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=97.68  E-value=0.00015  Score=55.95  Aligned_cols=79  Identities=20%  Similarity=0.300  Sum_probs=52.5

Q ss_pred             CCcEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCHH-----HHHHHHHHcCCCe---eecCCCchhHH---HHHHHH
Q 026217           51 QGEYVFVSAAS--GAVGQLVGQFAKLVGCYVVGSAGSKD-----KVDLLKNKFGFDE---AFNYKEEPDLD---AALKRY  117 (241)
Q Consensus        51 ~~~~vlI~ga~--g~~G~~avqla~~~g~~v~~~~~~~~-----~~~~~~~~~g~~~---~i~~~~~~~~~---~~i~~~  117 (241)
                      .+.+++|+||+  +++|.++++.+...|++|++++++.+     ..+.+.+..+...   ..|..+..++.   +.+.+.
T Consensus        19 ~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   98 (267)
T 3gdg_A           19 KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVAD   98 (267)
T ss_dssp             TTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHH
Confidence            56899999998  89999999999999999999987643     2333332344321   23444432333   333332


Q ss_pred             CCCCccEEEeCCC
Q 026217          118 FPEGINIYFENVG  130 (241)
Q Consensus       118 ~~~~~d~v~d~~g  130 (241)
                      . +++|++++++|
T Consensus        99 ~-g~id~li~nAg  110 (267)
T 3gdg_A           99 F-GQIDAFIANAG  110 (267)
T ss_dssp             T-SCCSEEEECCC
T ss_pred             c-CCCCEEEECCC
Confidence            2 37999999987

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=97.68  E-value=0.00024  Score=52.54  Aligned_cols=99  Identities=18%  Similarity=0.286  Sum_probs=69.6

Q ss_pred             HhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCC-e--eecCCCchhHHHHHHHHC
Q 026217           45 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFD-E--AFNYKEEPDLDAALKRYF  118 (241)
Q Consensus        45 ~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~---~g~~-~--~i~~~~~~~~~~~i~~~~  118 (241)
                      ....+.++++||-.|. | .|..++.+++. +.+|++++.+++..+.+++.   +|.. .  ++..+..    +.+..  
T Consensus        49 ~~l~~~~~~~vLDlGc-G-~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~----~~~~~--  119 (204)
T 3njr_A           49 AALAPRRGELLWDIGG-G-SGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAP----AALAD--  119 (204)
T ss_dssp             HHHCCCTTCEEEEETC-T-TCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTT----GGGTT--
T ss_pred             HhcCCCCCCEEEEecC-C-CCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchh----hhccc--
Confidence            4567899999999993 4 48888899888 88999999999988887743   3443 2  2222211    11111  


Q ss_pred             CCCccEEEeCCCc--hhHHHHHHhhccCCEEEEEee
Q 026217          119 PEGINIYFENVGG--KMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       119 ~~~~d~v~d~~g~--~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      .+.+|+|+...+.  ..+..+.+.|+++|+++....
T Consensus       120 ~~~~D~v~~~~~~~~~~l~~~~~~LkpgG~lv~~~~  155 (204)
T 3njr_A          120 LPLPEAVFIGGGGSQALYDRLWEWLAPGTRIVANAV  155 (204)
T ss_dssp             SCCCSEEEECSCCCHHHHHHHHHHSCTTCEEEEEEC
T ss_pred             CCCCCEEEECCcccHHHHHHHHHhcCCCcEEEEEec
Confidence            1269999876542  267888899999999987654

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=97.68  E-value=0.00097  Score=53.34  Aligned_cols=75  Identities=11%  Similarity=0.137  Sum_probs=51.1

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH----HHHHHHHHHc-------CCC-eeecCCCchhHHHHHHHHC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK----DKVDLLKNKF-------GFD-EAFNYKEEPDLDAALKRYF  118 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~----~~~~~~~~~~-------g~~-~~i~~~~~~~~~~~i~~~~  118 (241)
                      .+.+|||+||+|.+|...++.+...|.+|+++++++    ...+.++ ..       +.. ...|..+.    +.+.+..
T Consensus        24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~----~~~~~~~   98 (351)
T 3ruf_A           24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVK-TLVSTEQWSRFCFIEGDIRDL----TTCEQVM   98 (351)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHH-HTSCHHHHTTEEEEECCTTCH----HHHHHHT
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhh-hccccccCCceEEEEccCCCH----HHHHHHh
Confidence            357899999999999999999999999999999854    3344444 22       221 12244333    2333333


Q ss_pred             CCCccEEEeCCCc
Q 026217          119 PEGINIYFENVGG  131 (241)
Q Consensus       119 ~~~~d~v~d~~g~  131 (241)
                      . ++|+||++++.
T Consensus        99 ~-~~d~Vih~A~~  110 (351)
T 3ruf_A           99 K-GVDHVLHQAAL  110 (351)
T ss_dssp             T-TCSEEEECCCC
T ss_pred             c-CCCEEEECCcc
Confidence            3 69999999973

>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33

Probab=97.66  E-value=0.0003  Score=54.23  Aligned_cols=94  Identities=12%  Similarity=0.039  Sum_probs=69.4

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHcCCC-eeecCCCchhHHHHHHHHCCCCccEEEe
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEPDLDAALKRYFPEGINIYFE  127 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~-g~~v~~~~~~~~~~~~~~~~~g~~-~~i~~~~~~~~~~~i~~~~~~~~d~v~d  127 (241)
                      .++.+||..|. |. |..+..+++.. +.+|++++.+++..+.++ +.+.. .++..+.. ++     ...++.+|+|+.
T Consensus        84 ~~~~~vLdiG~-G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~-~~~~~~~~~~~d~~-~~-----~~~~~~fD~v~~  154 (269)
T 1p91_A           84 DKATAVLDIGC-GE-GYYTHAFADALPEITTFGLDVSKVAIKAAA-KRYPQVTFCVASSH-RL-----PFSDTSMDAIIR  154 (269)
T ss_dssp             TTCCEEEEETC-TT-STTHHHHHHTCTTSEEEEEESCHHHHHHHH-HHCTTSEEEECCTT-SC-----SBCTTCEEEEEE
T ss_pred             CCCCEEEEECC-CC-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHH-HhCCCcEEEEcchh-hC-----CCCCCceeEEEE
Confidence            68899999994 66 99999999987 789999999999999998 54432 22222111 11     122347999996


Q ss_pred             CCCchhHHHHHHhhccCCEEEEEee
Q 026217          128 NVGGKMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       128 ~~g~~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      ......+..+.+.|+++|+++....
T Consensus       155 ~~~~~~l~~~~~~L~pgG~l~~~~~  179 (269)
T 1p91_A          155 IYAPCKAEELARVVKPGGWVITATP  179 (269)
T ss_dssp             ESCCCCHHHHHHHEEEEEEEEEEEE
T ss_pred             eCChhhHHHHHHhcCCCcEEEEEEc
Confidence            5555778999999999999988754

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=97.66  E-value=0.00016  Score=55.84  Aligned_cols=80  Identities=18%  Similarity=0.261  Sum_probs=52.0

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHHH---cCCC-e--eecCCCchhHHHHHHHHCC--CC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSA-GSKDKVDLLKNK---FGFD-E--AFNYKEEPDLDAALKRYFP--EG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~-~~~~~~~~~~~~---~g~~-~--~i~~~~~~~~~~~i~~~~~--~~  121 (241)
                      .+.+++|+||++++|.+.++.+...|++|++++ ++.+..+...++   .+.. .  ..|..+..++...+.+...  ++
T Consensus        24 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  103 (269)
T 3gk3_A           24 AKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFGK  103 (269)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             cCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            567899999999999999999999999999998 555544333212   2322 1  2344443223222222211  36


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|++++++|
T Consensus       104 id~li~nAg  112 (269)
T 3gk3_A          104 VDVLINNAG  112 (269)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=97.65  E-value=0.00075  Score=46.58  Aligned_cols=75  Identities=21%  Similarity=0.210  Sum_probs=56.3

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCee-ecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEA-FNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~-i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      ..+++|.|+ |.+|...++.+...|.+|+++++++++.+.++ +.+...+ .|..++    +.+.+..-.++|+++.+++
T Consensus         6 ~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~-~~~~~~~~gd~~~~----~~l~~~~~~~~d~vi~~~~   79 (141)
T 3llv_A            6 RYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLE-DEGFDAVIADPTDE----SFYRSLDLEGVSAVLITGS   79 (141)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH-HTTCEEEECCTTCH----HHHHHSCCTTCSEEEECCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHH-HCCCcEEECCCCCH----HHHHhCCcccCCEEEEecC
Confidence            457999996 99999999999999999999999999999888 6665432 233332    2333332237999999999


Q ss_pred             ch
Q 026217          131 GK  132 (241)
Q Consensus       131 ~~  132 (241)
                      ..
T Consensus        80 ~~   81 (141)
T 3llv_A           80 DD   81 (141)
T ss_dssp             CH
T ss_pred             CH
Confidence            53

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=97.65  E-value=8.6e-05  Score=56.62  Aligned_cols=69  Identities=14%  Similarity=0.224  Sum_probs=46.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      +|+|+||+|++|..+++.+...|++|+++++++++.+    .   ....|..+...+...+.+. .+++|++++++|
T Consensus         3 ~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~---~~~~D~~~~~~~~~~~~~~-~~~~d~vi~~Ag   71 (255)
T 2dkn_A            3 VIAITGSASGIGAALKELLARAGHTVIGIDRGQADIE----A---DLSTPGGRETAVAAVLDRC-GGVLDGLVCCAG   71 (255)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE----C---CTTSHHHHHHHHHHHHHHH-TTCCSEEEECCC
T ss_pred             EEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHcc----c---cccCCcccHHHHHHHHHHc-CCCccEEEECCC
Confidence            6999999999999999988889999999998754321    0   1111211111222223333 247999999987

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=97.63  E-value=0.0001  Score=57.24  Aligned_cols=80  Identities=18%  Similarity=0.289  Sum_probs=53.1

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCC-e--eecCCCchhHHHHHHHHCC--CCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFD-E--AFNYKEEPDLDAALKRYFP--EGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~---~~g~~-~--~i~~~~~~~~~~~i~~~~~--~~~  122 (241)
                      .+.+++|+||+|++|...+..+...|++|+++++++++.+.+.+   ..+.. .  ..|..+..++...+.+...  +++
T Consensus        33 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i  112 (279)
T 3ctm_A           33 KGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGTI  112 (279)
T ss_dssp             TTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            46789999999999999999888889999999987655443331   23432 1  2344443133333332211  369


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |++++++|
T Consensus       113 d~li~~Ag  120 (279)
T 3ctm_A          113 DVFVANAG  120 (279)
T ss_dssp             SEEEECGG
T ss_pred             CEEEECCc
Confidence            99999987

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=97.63  E-value=0.0005  Score=54.27  Aligned_cols=75  Identities=15%  Similarity=0.178  Sum_probs=53.2

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC---HHHHHHHHHHcC----CC-eeecCCCchhHHHHHHHHCCCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGS---KDKVDLLKNKFG----FD-EAFNYKEEPDLDAALKRYFPEG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~---~~~~~~~~~~~g----~~-~~i~~~~~~~~~~~i~~~~~~~  121 (241)
                      .+.+++|+|+ |++|.+++..+...|+ +|+++.|+   .++.+.+.++++    .. .++++.+..++.+.+.     .
T Consensus       153 ~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~-----~  226 (315)
T 3tnl_A          153 IGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIA-----E  226 (315)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH-----T
T ss_pred             cCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhc-----C
Confidence            5789999997 9999999999999999 89999998   666655543432    21 2444443213333343     4


Q ss_pred             ccEEEeCCCc
Q 026217          122 INIYFENVGG  131 (241)
Q Consensus       122 ~d~v~d~~g~  131 (241)
                      +|+|++|++.
T Consensus       227 aDiIINaTp~  236 (315)
T 3tnl_A          227 SVIFTNATGV  236 (315)
T ss_dssp             CSEEEECSST
T ss_pred             CCEEEECccC
Confidence            9999999973

>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*

Probab=97.62  E-value=0.00011  Score=57.88  Aligned_cols=103  Identities=11%  Similarity=0.073  Sum_probs=71.6

Q ss_pred             HHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCCeeecCCCchhHHHHHHHHCC
Q 026217           43 FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEPDLDAALKRYFP  119 (241)
Q Consensus        43 l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~~~i~~~~~~~~~~~i~~~~~  119 (241)
                      +.+...++++++||-+|  .|.|..+..+++..|.+|++++.+++..+.+++.+   |...-+..... ++.    +. +
T Consensus        64 ~~~~~~~~~~~~vLDiG--cG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~~----~~-~  135 (302)
T 3hem_A           64 ALDKLNLEPGMTLLDIG--CGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQ-GWE----EF-D  135 (302)
T ss_dssp             HHHTTCCCTTCEEEEET--CTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEEC-CGG----GC-C
T ss_pred             HHHHcCCCCcCEEEEee--ccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEC-CHH----Hc-C
Confidence            44556789999999999  34589999999998999999999999888887432   33211111111 221    12 4


Q ss_pred             CCccEEEeCCC----------------chhHHHHHHhhccCCEEEEEeee
Q 026217          120 EGINIYFENVG----------------GKMLDAVLLNMRIQGRITLCGMI  153 (241)
Q Consensus       120 ~~~d~v~d~~g----------------~~~~~~~~~~l~~~G~~v~~g~~  153 (241)
                      +.+|+|+....                ...+..+.++|+|+|+++.....
T Consensus       136 ~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~  185 (302)
T 3hem_A          136 EPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTIT  185 (302)
T ss_dssp             CCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEE
T ss_pred             CCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence            58999986432                13567888899999999987653

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.62  E-value=0.00047  Score=53.67  Aligned_cols=75  Identities=11%  Similarity=0.079  Sum_probs=53.8

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCC----CeeecCCCchhHHHHHHHHCCCCccE
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGF----DEAFNYKEEPDLDAALKRYFPEGINI  124 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~g~----~~~i~~~~~~~~~~~i~~~~~~~~d~  124 (241)
                      -.+.+++|+|+ |++|.+++..+...|+ +|+++.|+.++.+.+.++++.    ..+...... ++.+.+.+     +|+
T Consensus       125 l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~-~l~~~l~~-----~Di  197 (283)
T 3jyo_A          125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDAR-GIEDVIAA-----ADG  197 (283)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECST-THHHHHHH-----SSE
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHH-HHHHHHhc-----CCE
Confidence            35789999997 9999999999999999 799999998887766535532    112112222 45444543     899


Q ss_pred             EEeCCCc
Q 026217          125 YFENVGG  131 (241)
Q Consensus       125 v~d~~g~  131 (241)
                      |++|++.
T Consensus       198 VInaTp~  204 (283)
T 3jyo_A          198 VVNATPM  204 (283)
T ss_dssp             EEECSST
T ss_pred             EEECCCC
Confidence            9999973

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=97.62  E-value=0.00015  Score=55.66  Aligned_cols=75  Identities=13%  Similarity=0.138  Sum_probs=50.7

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe---eecCCCchhHH---HHHHHHCCCCccE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLD---AALKRYFPEGINI  124 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~---~i~~~~~~~~~---~~i~~~~~~~~d~  124 (241)
                      .+.+++|+||++++|.+.++.+...|++|++++++.++  ... +++...   ..|..+..++.   +.+.+  -+++|+
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~--~~~-~~~~~~~~~~~D~~~~~~v~~~~~~~~~--~g~id~   82 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGED--VVA-DLGDRARFAAADVTDEAAVASALDLAET--MGTLRI   82 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHH--HHH-HTCTTEEEEECCTTCHHHHHHHHHHHHH--HSCEEE
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHH--HHH-hcCCceEEEECCCCCHHHHHHHHHHHHH--hCCCCE
Confidence            46789999999999999999999999999999975443  233 455321   23444431222   22322  247999


Q ss_pred             EEeCCC
Q 026217          125 YFENVG  130 (241)
Q Consensus       125 v~d~~g  130 (241)
                      +++++|
T Consensus        83 lv~nAg   88 (257)
T 3tl3_A           83 VVNCAG   88 (257)
T ss_dssp             EEECGG
T ss_pred             EEECCC
Confidence            999998

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=97.62  E-value=9.9e-05  Score=56.86  Aligned_cols=79  Identities=10%  Similarity=0.211  Sum_probs=53.0

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHc---CCC-e--eecCCCchhHHHHHH---HHC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVG---CYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALK---RYF  118 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g---~~v~~~~~~~~~~~~~~~~~---g~~-~--~i~~~~~~~~~~~i~---~~~  118 (241)
                      ++.+++|+||+|++|..+++.+...|   ++|+++++++++.+.++ ++   +.. .  ..|..+..++...+.   +..
T Consensus        20 ~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~-~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   98 (267)
T 1sny_A           20 HMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELE-DLAKNHSNIHILEIDLRNFDAYDKLVADIEGVT   98 (267)
T ss_dssp             CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHH-HHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHH-HhhccCCceEEEEecCCChHHHHHHHHHHHHhc
Confidence            46789999999999999999998899   99999998876444333 22   221 1  234444323333333   222


Q ss_pred             CC-CccEEEeCCC
Q 026217          119 PE-GINIYFENVG  130 (241)
Q Consensus       119 ~~-~~d~v~d~~g  130 (241)
                      +. ++|++|+++|
T Consensus        99 g~~~id~li~~Ag  111 (267)
T 1sny_A           99 KDQGLNVLFNNAG  111 (267)
T ss_dssp             GGGCCSEEEECCC
T ss_pred             CCCCccEEEECCC
Confidence            22 5999999987

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=97.61  E-value=2.7e-05  Score=60.05  Aligned_cols=76  Identities=17%  Similarity=0.116  Sum_probs=50.8

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC-eeecCCCchhHHHHHHHHCC--CCccEEEe
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEPDLDAALKRYFP--EGINIYFE  127 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~-~~i~~~~~~~~~~~i~~~~~--~~~d~v~d  127 (241)
                      .+.+++|+||+|++|.+.++.+...|++|++++++.++...    .... ...|..+..++...+.+...  +++|++++
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~  102 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD----PDIHTVAGDISKPETADRIVREGIERFGRIDSLVN  102 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSS----TTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc----CceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence            56799999999999999999999999999999987543221    1111 12344443133322322211  36999999


Q ss_pred             CCC
Q 026217          128 NVG  130 (241)
Q Consensus       128 ~~g  130 (241)
                      ++|
T Consensus       103 nAg  105 (260)
T 3un1_A          103 NAG  105 (260)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            987

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=97.60  E-value=2.8e-05  Score=59.39  Aligned_cols=75  Identities=16%  Similarity=0.177  Sum_probs=51.3

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCC--CCccEEEeC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFP--EGINIYFEN  128 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~--~~~d~v~d~  128 (241)
                      .+.+++|+||+|++|.+.++.+...|++|+++++++++.+.+.   +  ...|..+..++...+.+...  +++|+++++
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~---~--~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~   88 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF---G--VEVDVTDSDAVDRAFTAVEEHQGPVEVLVSN   88 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE---E--EECCTTCHHHHHHHHHHHHHHHSSCSEEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHhc---C--eeccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            4678999999999999999999999999999998765433221   1  22344443133332322211  369999999


Q ss_pred             CC
Q 026217          129 VG  130 (241)
Q Consensus       129 ~g  130 (241)
                      +|
T Consensus        89 Ag   90 (247)
T 1uzm_A           89 AG   90 (247)
T ss_dssp             CS
T ss_pred             CC
Confidence            87

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=97.59  E-value=0.00013  Score=56.67  Aligned_cols=95  Identities=17%  Similarity=0.218  Sum_probs=62.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHcCCCe-eecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           54 YVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~--g~~v~~~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      +|+|+||+|.+|...++.+...  |.+|+++++++++.+.+. ..+... ..|..+.    +.+.+... ++|+||++++
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~d~----~~~~~~~~-~~d~vi~~a~   74 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA-AQGITVRQADYGDE----AALTSALQ-GVEKLLLISS   74 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHH-HTTCEEEECCTTCH----HHHHHHTT-TCSEEEECC-
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhh-cCCCeEEEcCCCCH----HHHHHHHh-CCCEEEEeCC
Confidence            4899999999999999988887  899999999877665555 444432 2344443    22333332 5999999987


Q ss_pred             c------hhHHHHHHhhcc-C-CEEEEEeeec
Q 026217          131 G------KMLDAVLLNMRI-Q-GRITLCGMIS  154 (241)
Q Consensus       131 ~------~~~~~~~~~l~~-~-G~~v~~g~~~  154 (241)
                      .      .....+++.+.. + ++++.++...
T Consensus        75 ~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~  106 (286)
T 2zcu_A           75 SEVGQRAPQHRNVINAAKAAGVKFIAYTSLLH  106 (286)
T ss_dssp             -------CHHHHHHHHHHHHTCCEEEEEEETT
T ss_pred             CCchHHHHHHHHHHHHHHHcCCCEEEEECCCC
Confidence            4      123444454443 3 5888887644

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=97.59  E-value=0.00029  Score=51.75  Aligned_cols=63  Identities=13%  Similarity=0.213  Sum_probs=45.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      +++|+||+|++|...++.+. .|++|++++++++           ....|..+...+.+.+...  +++|++++++|
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-----------~~~~D~~~~~~~~~~~~~~--~~~d~vi~~ag   67 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-----------DVTVDITNIDSIKKMYEQV--GKVDAIVSATG   67 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-----------SEECCTTCHHHHHHHHHHH--CCEEEEEECCC
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-----------ceeeecCCHHHHHHHHHHh--CCCCEEEECCC
Confidence            69999999999999998888 8999999998753           1223444431333444443  46999999987

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=97.58  E-value=0.00022  Score=54.82  Aligned_cols=80  Identities=15%  Similarity=0.201  Sum_probs=52.2

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHHHc---CCC---eeecCCCchhHHHHHHHHCC--CC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK-DKVDLLKNKF---GFD---EAFNYKEEPDLDAALKRYFP--EG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~-~~~~~~~~~~---g~~---~~i~~~~~~~~~~~i~~~~~--~~  121 (241)
                      .+.+++|+||+|++|.+.++.+...|++|+++++++ +..+.+.+.+   +..   ...|..+..++...+.+...  ++
T Consensus         6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   85 (264)
T 3i4f_A            6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGK   85 (264)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            357899999999999999999999999999986654 3444444222   211   12344443233333332211  36


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|++++++|
T Consensus        86 id~lv~~Ag   94 (264)
T 3i4f_A           86 IDFLINNAG   94 (264)
T ss_dssp             CCEEECCCC
T ss_pred             CCEEEECCc
Confidence            999999998

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=97.57  E-value=0.00016  Score=62.54  Aligned_cols=80  Identities=20%  Similarity=0.265  Sum_probs=48.2

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC---------CHHHHHHHHH---HcCCCeeecCCCchhHHHHHHHHC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG---------SKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYF  118 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~---------~~~~~~~~~~---~~g~~~~i~~~~~~~~~~~i~~~~  118 (241)
                      .|.+++|+||++++|.+.++.+...|++|+++++         +.++.+.+.+   ..+...+.|..+..+....+.+..
T Consensus        18 ~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~~~~~   97 (613)
T 3oml_A           18 DGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVIETAI   97 (613)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHHC---
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHHHHHH
Confidence            5789999999999999999999999999999876         4333333321   334444556555424444444333


Q ss_pred             C--CCccEEEeCCC
Q 026217          119 P--EGINIYFENVG  130 (241)
Q Consensus       119 ~--~~~d~v~d~~g  130 (241)
                      .  +++|++++++|
T Consensus        98 ~~~g~iDiLVnnAG  111 (613)
T 3oml_A           98 KAFGRVDILVNNAG  111 (613)
T ss_dssp             -------CEECCCC
T ss_pred             HHCCCCcEEEECCC
Confidence            2  37999999998

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=97.57  E-value=0.0002  Score=54.80  Aligned_cols=80  Identities=20%  Similarity=0.240  Sum_probs=50.6

Q ss_pred             CCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-CCHHHH----HHHHHHcCCCe---eecCCCchhHHH---HHHHH
Q 026217           49 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSA-GSKDKV----DLLKNKFGFDE---AFNYKEEPDLDA---ALKRY  117 (241)
Q Consensus        49 ~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~-~~~~~~----~~~~~~~g~~~---~i~~~~~~~~~~---~i~~~  117 (241)
                      ..++.++||+||++++|.+.++.+...|++|++++ ++.++.    +.++ ..+...   ..|..+..++..   ++.+.
T Consensus        10 ~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   88 (256)
T 3ezl_A           10 VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQK-ALGFDFYASEGNVGDWDSTKQAFDKVKAE   88 (256)
T ss_dssp             ---CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHH-HTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHH-hcCCeeEEEecCCCCHHHHHHHHHHHHHh
Confidence            35678999999999999999999999999999887 333322    2333 344321   224444312332   33332


Q ss_pred             CCCCccEEEeCCC
Q 026217          118 FPEGINIYFENVG  130 (241)
Q Consensus       118 ~~~~~d~v~d~~g  130 (241)
                      . +++|++++++|
T Consensus        89 ~-g~id~lv~~Ag  100 (256)
T 3ezl_A           89 V-GEIDVLVNNAG  100 (256)
T ss_dssp             T-CCEEEEEECCC
T ss_pred             c-CCCCEEEECCC
Confidence            2 37999999987

>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}

Probab=97.56  E-value=0.00017  Score=54.38  Aligned_cols=103  Identities=10%  Similarity=0.078  Sum_probs=68.9

Q ss_pred             HhcCCCCCcEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHc---CCCeeecCCCchhHHHHHHHHC-C
Q 026217           45 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEPDLDAALKRYF-P  119 (241)
Q Consensus        45 ~~~~~~~~~~vlI~ga~g~~G~~avqla~~~-g~~v~~~~~~~~~~~~~~~~~---g~~~~i~~~~~~~~~~~i~~~~-~  119 (241)
                      ......++++||..|+ | .|..+..+++.. +.+|++++.+++..+.+++.+   |...-+..... +..+.+.... +
T Consensus        48 ~~~~~~~~~~vLdiG~-G-~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~~~~~~~~  124 (233)
T 2gpy_A           48 HLLKMAAPARILEIGT-A-IGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFG-DALQLGEKLELY  124 (233)
T ss_dssp             HHHHHHCCSEEEEECC-T-TSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECS-CGGGSHHHHTTS
T ss_pred             HHHhccCCCEEEEecC-C-CcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEC-CHHHHHHhcccC
Confidence            3345568899999993 4 788899999988 679999999999888887432   44211111111 2222222222 2


Q ss_pred             CCccEEEeCCCc----hhHHHHHHhhccCCEEEEE
Q 026217          120 EGINIYFENVGG----KMLDAVLLNMRIQGRITLC  150 (241)
Q Consensus       120 ~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~  150 (241)
                      +.+|+|+.....    ..+..+.+.|+++|+++..
T Consensus       125 ~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~  159 (233)
T 2gpy_A          125 PLFDVLFIDAAKGQYRRFFDMYSPMVRPGGLILSD  159 (233)
T ss_dssp             CCEEEEEEEGGGSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred             CCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence            479999876552    4567888899999999875

>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13

Probab=97.56  E-value=0.00054  Score=53.12  Aligned_cols=104  Identities=16%  Similarity=0.276  Sum_probs=71.9

Q ss_pred             HHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHc---CCCeeecCCCchhHHHHHHHH
Q 026217           43 FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEPDLDAALKRY  117 (241)
Q Consensus        43 l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~--g~~v~~~~~~~~~~~~~~~~~---g~~~~i~~~~~~~~~~~i~~~  117 (241)
                      +.....+.++++||-.|+ |. |..++.+++..  +.+|++++.+++..+.+++.+   +...-+..... ++.+.   .
T Consensus       104 i~~~~~~~~~~~VLDiG~-G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~---~  177 (277)
T 1o54_A          104 IAMMLDVKEGDRIIDTGV-GS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVR-DISEG---F  177 (277)
T ss_dssp             HHHHTTCCTTCEEEEECC-TT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECC-CGGGC---C
T ss_pred             HHHHhCCCCCCEEEEECC-cC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEEC-CHHHc---c
Confidence            335568899999999994 54 88899999986  469999999999888887432   43111111111 22211   2


Q ss_pred             CCCCccEEEeCCCc--hhHHHHHHhhccCCEEEEEee
Q 026217          118 FPEGINIYFENVGG--KMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       118 ~~~~~d~v~d~~g~--~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      .++.+|+|+.....  ..+..+.+.|+++|.++....
T Consensus       178 ~~~~~D~V~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  214 (277)
T 1o54_A          178 DEKDVDALFLDVPDPWNYIDKCWEALKGGGRFATVCP  214 (277)
T ss_dssp             SCCSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEES
T ss_pred             cCCccCEEEECCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence            22479999876653  578889999999999988643

>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*

Probab=97.56  E-value=0.00047  Score=52.64  Aligned_cols=103  Identities=17%  Similarity=0.237  Sum_probs=72.5

Q ss_pred             HHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHc---CCCeeecCCCchhHHHHHHHH
Q 026217           43 FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEPDLDAALKRY  117 (241)
Q Consensus        43 l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~--g~~v~~~~~~~~~~~~~~~~~---g~~~~i~~~~~~~~~~~i~~~  117 (241)
                      +.....+.++++||-.|+ | .|..+..+++..  +.+|++++.+++..+.+++.+   |...-+..... ++.+.   .
T Consensus        85 i~~~~~~~~~~~vldiG~-G-~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~---~  158 (255)
T 3mb5_A           85 IVAYAGISPGDFIVEAGV-G-SGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLK-DIYEG---I  158 (255)
T ss_dssp             HHHHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECS-CGGGC---C
T ss_pred             HHHhhCCCCCCEEEEecC-C-chHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEEC-chhhc---c
Confidence            435568899999999993 4 488899999885  569999999999888887432   54321111111 22211   2


Q ss_pred             CCCCccEEEeCCCc--hhHHHHHHhhccCCEEEEEe
Q 026217          118 FPEGINIYFENVGG--KMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       118 ~~~~~d~v~d~~g~--~~~~~~~~~l~~~G~~v~~g  151 (241)
                      ..+.+|+|+.....  ..+..+.+.|+++|+++...
T Consensus       159 ~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~  194 (255)
T 3mb5_A          159 EEENVDHVILDLPQPERVVEHAAKALKPGGFFVAYT  194 (255)
T ss_dssp             CCCSEEEEEECSSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             CCCCcCEEEECCCCHHHHHHHHHHHcCCCCEEEEEE
Confidence            22379999987664  47899999999999998864

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=97.56  E-value=0.00012  Score=55.88  Aligned_cols=75  Identities=17%  Similarity=0.327  Sum_probs=51.7

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC-eeecCCCchhHHHHHHHHC--CCCccEEEe
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEPDLDAALKRYF--PEGINIYFE  127 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~-~~i~~~~~~~~~~~i~~~~--~~~~d~v~d  127 (241)
                      .+.+++|+||+|++|.+.++.+...|++|++++++++.    + +.+.. ...|..+..++...+.+..  -+++|++++
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~----~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~   80 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ----E-QYPFATEVMDVADAAQVAQVCQRLLAETERLDALVN   80 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS----S-CCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh----h-cCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            46789999999999999999999999999999987542    2 33422 1234444323333333221  137999999


Q ss_pred             CCC
Q 026217          128 NVG  130 (241)
Q Consensus       128 ~~g  130 (241)
                      ++|
T Consensus        81 ~Ag   83 (250)
T 2fwm_X           81 AAG   83 (250)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            987

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=97.55  E-value=0.00071  Score=53.88  Aligned_cols=75  Identities=15%  Similarity=0.252  Sum_probs=50.8

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHH--HHHHHHcCC--C-e--eecCCCchhHHHHHHHHCCCCccE
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKV--DLLKNKFGF--D-E--AFNYKEEPDLDAALKRYFPEGINI  124 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~--~~~~~~~g~--~-~--~i~~~~~~~~~~~i~~~~~~~~d~  124 (241)
                      +.+|||+||+|.+|...++.+...|.+|+++++++++.  +.+. .++.  . .  ..|..+...+.+.+...   ++|+
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---~~d~   78 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLK-ELGIENDVKIIHMDLLEFSNIIRTIEKV---QPDE   78 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHH-HTTCTTTEEECCCCTTCHHHHHHHHHHH---CCSE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHh-hccccCceeEEECCCCCHHHHHHHHHhc---CCCE
Confidence            56899999999999999998888999999999876542  2334 4321  1 1  12444431333333322   5899


Q ss_pred             EEeCCC
Q 026217          125 YFENVG  130 (241)
Q Consensus       125 v~d~~g  130 (241)
                      ||++++
T Consensus        79 vih~A~   84 (345)
T 2z1m_A           79 VYNLAA   84 (345)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999987

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=97.55  E-value=0.0001  Score=56.82  Aligned_cols=74  Identities=18%  Similarity=0.271  Sum_probs=50.1

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC-eeecCCCchhHHHHHHHHCC--CCccEEEe
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEPDLDAALKRYFP--EGINIYFE  127 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~-~~i~~~~~~~~~~~i~~~~~--~~~d~v~d  127 (241)
                      .+.+++|+||+|++|.++++.+...|++|+++++++++    .  -... ...|..+..++...+.+...  +++|++++
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~----~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~   80 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG----E--AKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVN   80 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC----S--CSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc----C--CceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            46789999999999999999999999999999987544    0  0111 12344443233333332211  36999999


Q ss_pred             CCC
Q 026217          128 NVG  130 (241)
Q Consensus       128 ~~g  130 (241)
                      ++|
T Consensus        81 ~Ag   83 (264)
T 2dtx_A           81 NAG   83 (264)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            987

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=97.53  E-value=5.5e-05  Score=58.02  Aligned_cols=75  Identities=13%  Similarity=0.148  Sum_probs=50.4

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHC--CCCccEEEeC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYF--PEGINIYFEN  128 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~--~~~~d~v~d~  128 (241)
                      .+.+++|+||+|++|.+.++.+...|++|+++++++++.+.+.     ....|..+..++...+.+..  -+++|+++++
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~n   94 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEGFL-----AVKCDITDTEQVEQAYKEIEETHGPVEVLIAN   94 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE-----EEECCTTSHHHHHHHHHHHHHHTCSCSEEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhccce-----EEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            3678999999999999999999999999999998765432111     01234444313333232221  1369999998


Q ss_pred             CC
Q 026217          129 VG  130 (241)
Q Consensus       129 ~g  130 (241)
                      +|
T Consensus        95 Ag   96 (253)
T 2nm0_A           95 AG   96 (253)
T ss_dssp             CS
T ss_pred             CC
Confidence            87

>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}

Probab=97.53  E-value=0.00047  Score=52.62  Aligned_cols=103  Identities=12%  Similarity=0.078  Sum_probs=70.0

Q ss_pred             hcCCCCCcEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHc---CCCeeecCCCchhHHHHHHHHCC-
Q 026217           46 VCSPKQGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEPDLDAALKRYFP-  119 (241)
Q Consensus        46 ~~~~~~~~~vlI~ga~g~~G~~avqla~~~--g~~v~~~~~~~~~~~~~~~~~---g~~~~i~~~~~~~~~~~i~~~~~-  119 (241)
                      .....++.+||-.|  .+.|..++.+++.+  +.+|++++.+++..+.+++.+   |...-+..... +..+.+....+ 
T Consensus        58 l~~~~~~~~VLdiG--~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~-d~~~~l~~~~~~  134 (248)
T 3tfw_A           58 LVRLTQAKRILEIG--TLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREG-PALQSLESLGEC  134 (248)
T ss_dssp             HHHHHTCSEEEEEC--CTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEES-CHHHHHHTCCSC
T ss_pred             HHhhcCCCEEEEec--CCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHhcCCC
Confidence            34556789999999  45688889999887  569999999999888887433   54321222222 44444444433 


Q ss_pred             CCccEEEeCCCc----hhHHHHHHhhccCCEEEEEe
Q 026217          120 EGINIYFENVGG----KMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       120 ~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~g  151 (241)
                      +.+|+|+-....    ..+..+.+.|+++|.++...
T Consensus       135 ~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~~  170 (248)
T 3tfw_A          135 PAFDLIFIDADKPNNPHYLRWALRYSRPGTLIIGDN  170 (248)
T ss_dssp             CCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEEC
T ss_pred             CCeEEEEECCchHHHHHHHHHHHHhcCCCeEEEEeC
Confidence            279999843332    36778889999999888754

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=97.53  E-value=4e-05  Score=58.29  Aligned_cols=77  Identities=13%  Similarity=0.100  Sum_probs=49.8

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHH---HHHHHHCC-CCccEE
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLD---AALKRYFP-EGINIY  125 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~---~~i~~~~~-~~~d~v  125 (241)
                      ..+.+++|+||+|++|.+.++.+...|++|+++++++++.+.   .. .....|..+..++.   +++.+..+ +++|++
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~---~~-~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~l   80 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEAS---AS-VIVKMTDSFTEQADQVTAEVGKLLGDQKVDAI   80 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSS---EE-EECCCCSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhccC---Cc-EEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEE
Confidence            356789999999999999999999999999999987654220   00 00112333321222   22222222 479999


Q ss_pred             EeCCC
Q 026217          126 FENVG  130 (241)
Q Consensus       126 ~d~~g  130 (241)
                      ++++|
T Consensus        81 v~~Ag   85 (241)
T 1dhr_A           81 LCVAG   85 (241)
T ss_dssp             EECCC
T ss_pred             EEccc
Confidence            99987

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=97.52  E-value=0.0003  Score=51.87  Aligned_cols=73  Identities=18%  Similarity=0.240  Sum_probs=50.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC-eeecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~-~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      +++|+||+|++|...++.+...  +|+++++++++.+.+.++++.. ...|..+..++...+.+  .+++|++++++|
T Consensus         2 ~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~~~id~vi~~ag   75 (207)
T 2yut_A            2 RVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGARALPADLADELEAKALLEE--AGPLDLLVHAVG   75 (207)
T ss_dssp             EEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTCEECCCCTTSHHHHHHHHHH--HCSEEEEEECCC
T ss_pred             EEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccCcEEEeeCCCHHHHHHHHHh--cCCCCEEEECCC
Confidence            6899999999999887776665  9999999988877666444431 12244443133333333  247999999987

>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}

Probab=97.52  E-value=0.00032  Score=53.11  Aligned_cols=102  Identities=11%  Similarity=0.131  Sum_probs=69.6

Q ss_pred             hcCCCCCcEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHc---CCCeeecCCCchhHHHHHHHHC--
Q 026217           46 VCSPKQGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEPDLDAALKRYF--  118 (241)
Q Consensus        46 ~~~~~~~~~vlI~ga~g~~G~~avqla~~~--g~~v~~~~~~~~~~~~~~~~~---g~~~~i~~~~~~~~~~~i~~~~--  118 (241)
                      .....++++||-.|  .|.|..+..+++..  +.+|++++.+++..+.+++.+   |...-+..... +..+.+....  
T Consensus        55 l~~~~~~~~VLdiG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~-d~~~~~~~~~~~  131 (239)
T 2hnk_A           55 LTKISGAKRIIEIG--TFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLG-SALETLQVLIDS  131 (239)
T ss_dssp             HHHHHTCSEEEEEC--CTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEES-CHHHHHHHHHHC
T ss_pred             HHHhhCcCEEEEEe--CCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEEC-CHHHHHHHHHhh
Confidence            34556789999999  34799999999987  569999999999888877432   44321111111 3333333221  


Q ss_pred             ------------C-CCccEEEeCCCc----hhHHHHHHhhccCCEEEEE
Q 026217          119 ------------P-EGINIYFENVGG----KMLDAVLLNMRIQGRITLC  150 (241)
Q Consensus       119 ------------~-~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~  150 (241)
                                  + +.+|+|+.....    ..+..+.+.|+++|.++..
T Consensus       132 ~~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~  180 (239)
T 2hnk_A          132 KSAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIAD  180 (239)
T ss_dssp             SSCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence                        2 579999877653    3567888899999999875

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=97.52  E-value=0.00022  Score=55.41  Aligned_cols=95  Identities=20%  Similarity=0.251  Sum_probs=63.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHcCCCe-eecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           54 YVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~--g~~v~~~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      +|+|+||+|.+|...++.+...  |.+|+++++++++.+.+. ..+... ..|..+.    +.+.+... ++|+||.+++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~-~~~~~~~~~D~~d~----~~l~~~~~-~~d~vi~~a~   75 (287)
T 2jl1_A            2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA-DQGVEVRHGDYNQP----ESLQKAFA-GVSKLLFISG   75 (287)
T ss_dssp             CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH-HTTCEEEECCTTCH----HHHHHHTT-TCSEEEECCC
T ss_pred             eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh-hcCCeEEEeccCCH----HHHHHHHh-cCCEEEEcCC
Confidence            5899999999999999888887  899999999877666555 444432 2344443    23333332 5999999987


Q ss_pred             ch--------hHHHHHHhhccC--CEEEEEeeec
Q 026217          131 GK--------MLDAVLLNMRIQ--GRITLCGMIS  154 (241)
Q Consensus       131 ~~--------~~~~~~~~l~~~--G~~v~~g~~~  154 (241)
                      ..        ....+++.+...  ++++.++...
T Consensus        76 ~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~  109 (287)
T 2jl1_A           76 PHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAF  109 (287)
T ss_dssp             CCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEETT
T ss_pred             CCcCchHHHHHHHHHHHHHHHcCCCEEEEECCCC
Confidence            31        223344444443  4888887644

>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*

Probab=97.52  E-value=0.0003  Score=53.96  Aligned_cols=103  Identities=7%  Similarity=0.043  Sum_probs=71.4

Q ss_pred             HHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC-C--eeecCCCchhHHHHHHHHC
Q 026217           42 GFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF-D--EAFNYKEEPDLDAALKRYF  118 (241)
Q Consensus        42 ~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~-~--~~i~~~~~~~~~~~i~~~~  118 (241)
                      .+.+...+.++.+||-.|  .|.|..+..+++..+.+|++++.++...+.+++.... .  .++..+.. ++     ...
T Consensus        46 ~~~~~~~~~~~~~vLdiG--~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~-~~-----~~~  117 (266)
T 3ujc_A           46 KILSDIELNENSKVLDIG--SGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGNNKIIFEANDIL-TK-----EFP  117 (266)
T ss_dssp             HHTTTCCCCTTCEEEEET--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTT-TC-----CCC
T ss_pred             HHHHhcCCCCCCEEEEEC--CCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccc-cC-----CCC
Confidence            343556788999999999  4488889999988899999999999999999833322 1  11111111 11     112


Q ss_pred             CCCccEEEeCCCc---------hhHHHHHHhhccCCEEEEEee
Q 026217          119 PEGINIYFENVGG---------KMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       119 ~~~~d~v~d~~g~---------~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      ++.+|+|+....-         ..+..+.++|+++|+++....
T Consensus       118 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  160 (266)
T 3ujc_A          118 ENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDY  160 (266)
T ss_dssp             TTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             CCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence            3479999875431         246788889999999988764

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=97.52  E-value=2.6e-05  Score=60.32  Aligned_cols=74  Identities=19%  Similarity=0.261  Sum_probs=49.8

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHH---HHHHHHCCCCccEEEe
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLD---AALKRYFPEGINIYFE  127 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~---~~i~~~~~~~~d~v~d  127 (241)
                      .+.+++|+||++++|.++++.+...|++|++++++.++.+... .+    ..|..+.....   +.+.+.. +++|++++
T Consensus        27 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~-~~----~~Dv~~~~~~~~~~~~~~~~~-g~iD~lvn  100 (266)
T 3uxy_A           27 EGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADL-HL----PGDLREAAYADGLPGAVAAGL-GRLDIVVN  100 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCSE-EC----CCCTTSHHHHHHHHHHHHHHH-SCCCEEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhhh-cc----CcCCCCHHHHHHHHHHHHHhc-CCCCEEEE
Confidence            5789999999999999999999999999999998755432211 11    12333321222   2222222 36999999


Q ss_pred             CCC
Q 026217          128 NVG  130 (241)
Q Consensus       128 ~~g  130 (241)
                      ++|
T Consensus       101 nAg  103 (266)
T 3uxy_A          101 NAG  103 (266)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            988

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=97.50  E-value=0.00045  Score=52.47  Aligned_cols=74  Identities=11%  Similarity=0.126  Sum_probs=48.9

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHH-----HHHCC--CCcc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL-----KRYFP--EGIN  123 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i-----~~~~~--~~~d  123 (241)
                      .+.+++|+||+|++|.+.++.+.. |.+|+++++++++.+.+. +......+..    ++.+..     .+...  +++|
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~-~~~~~~~~~~----D~~~~~~~~~~~~~~~~~~~id   77 (245)
T 3e9n_A            4 KKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALA-EIEGVEPIES----DIVKEVLEEGGVDKLKNLDHVD   77 (245)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHH-TSTTEEEEEC----CHHHHHHTSSSCGGGTTCSCCS
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHH-hhcCCcceec----ccchHHHHHHHHHHHHhcCCCC
Confidence            367899999999999988887765 899999999998888777 4322122211    222211     11111  3799


Q ss_pred             EEEeCCC
Q 026217          124 IYFENVG  130 (241)
Q Consensus       124 ~v~d~~g  130 (241)
                      ++++++|
T Consensus        78 ~lv~~Ag   84 (245)
T 3e9n_A           78 TLVHAAA   84 (245)
T ss_dssp             EEEECC-
T ss_pred             EEEECCC
Confidence            9999997

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=97.50  E-value=0.00029  Score=54.36  Aligned_cols=80  Identities=15%  Similarity=0.126  Sum_probs=51.0

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHHH---cCCC-e--eecCCCchhHHHHHHHHCC--CC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSA-GSKDKVDLLKNK---FGFD-E--AFNYKEEPDLDAALKRYFP--EG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~-~~~~~~~~~~~~---~g~~-~--~i~~~~~~~~~~~i~~~~~--~~  121 (241)
                      .+.+++|+||+|++|.+.++.+...|++|+++. ++.++.+...++   .+.. .  ..|..+..++.+.+.+...  ++
T Consensus        25 ~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  104 (267)
T 4iiu_A           25 MSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGA  104 (267)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            467899999999999999999999999986654 555544433322   2322 1  2344443233333322211  37


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|++++++|
T Consensus       105 id~li~nAg  113 (267)
T 4iiu_A          105 WYGVVSNAG  113 (267)
T ss_dssp             CSEEEECCC
T ss_pred             ccEEEECCC
Confidence            999999987

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=97.49  E-value=0.00046  Score=56.49  Aligned_cols=84  Identities=14%  Similarity=0.069  Sum_probs=56.2

Q ss_pred             cCC-CCCcEEEEEcCCchHHHHHHHHHHH-cCCEEEEEeCCHHH---------------H-HHHHHHcCCCe---eecCC
Q 026217           47 CSP-KQGEYVFVSAASGAVGQLVGQFAKL-VGCYVVGSAGSKDK---------------V-DLLKNKFGFDE---AFNYK  105 (241)
Q Consensus        47 ~~~-~~~~~vlI~ga~g~~G~~avqla~~-~g~~v~~~~~~~~~---------------~-~~~~~~~g~~~---~i~~~  105 (241)
                      ..+ +.+.++||+||++|+|++.++.+.. .|++|+++.++.+.               . +.++ ..|...   ..|-.
T Consensus        55 ~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~-~~G~~a~~i~~Dvt  133 (422)
T 3s8m_A           55 GVRNDGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAK-AAGLYSKSINGDAF  133 (422)
T ss_dssp             CCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHH-HTTCCEEEEESCTT
T ss_pred             cccccCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHH-hcCCcEEEEEecCC
Confidence            345 4678999999999999998888877 99999999876432               1 3444 556432   22444


Q ss_pred             Cchh---HHHHHHHHCCCCccEEEeCCCc
Q 026217          106 EEPD---LDAALKRYFPEGINIYFENVGG  131 (241)
Q Consensus       106 ~~~~---~~~~i~~~~~~~~d~v~d~~g~  131 (241)
                      +...   +.+.+.+..+|++|++++++|.
T Consensus       134 d~~~v~~~v~~i~~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          134 SDAARAQVIELIKTEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             SHHHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred             CHHHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence            4312   3344444443579999999874

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=97.49  E-value=0.00069  Score=49.85  Aligned_cols=100  Identities=12%  Similarity=0.127  Sum_probs=69.9

Q ss_pred             HhcCCCCCcEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHH---cCCCe--eecCCCchhHHHHHHHHC
Q 026217           45 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNK---FGFDE--AFNYKEEPDLDAALKRYF  118 (241)
Q Consensus        45 ~~~~~~~~~~vlI~ga~g~~G~~avqla~~~-g~~v~~~~~~~~~~~~~~~~---~g~~~--~i~~~~~~~~~~~i~~~~  118 (241)
                      ....++++++||-.|+ | .|..++.+++.. +.+|++++.+++..+.+++.   .|.+.  ++..+    ..+.+..  
T Consensus        34 ~~l~~~~~~~vLDiG~-G-~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d----~~~~~~~--  105 (204)
T 3e05_A           34 SKLRLQDDLVMWDIGA-G-SASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAF----APEGLDD--  105 (204)
T ss_dssp             HHTTCCTTCEEEEETC-T-TCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECC----TTTTCTT--
T ss_pred             HHcCCCCCCEEEEECC-C-CCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCC----hhhhhhc--
Confidence            4568899999999993 4 588899999886 36999999999988888733   24322  22211    1111111  


Q ss_pred             CCCccEEEeCCC----chhHHHHHHhhccCCEEEEEee
Q 026217          119 PEGINIYFENVG----GKMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       119 ~~~~d~v~d~~g----~~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      .+.+|+|+....    ...+..+.+.|+++|+++....
T Consensus       106 ~~~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  143 (204)
T 3e05_A          106 LPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAV  143 (204)
T ss_dssp             SCCCSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred             CCCCCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEec
Confidence            136999987764    2567888999999999998644

>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}

Probab=97.48  E-value=0.00072  Score=48.40  Aligned_cols=102  Identities=15%  Similarity=0.247  Sum_probs=70.4

Q ss_pred             HhcCCCCCcEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHH---cCCC-eeecCCCchhHHHHHHHHCC
Q 026217           45 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNK---FGFD-EAFNYKEEPDLDAALKRYFP  119 (241)
Q Consensus        45 ~~~~~~~~~~vlI~ga~g~~G~~avqla~~~-g~~v~~~~~~~~~~~~~~~~---~g~~-~~i~~~~~~~~~~~i~~~~~  119 (241)
                      ....+.++++||..|. | .|..+..+++.. +.+|++++.+++..+.+++.   .+.+ .++ ...  +..+.+.. ..
T Consensus        19 ~~~~~~~~~~vldiG~-G-~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~-~~~--d~~~~~~~-~~   92 (178)
T 3hm2_A           19 SALAPKPHETLWDIGG-G-SGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIA-VQQ--GAPRAFDD-VP   92 (178)
T ss_dssp             HHHCCCTTEEEEEEST-T-TTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEE-EEC--CTTGGGGG-CC
T ss_pred             HHhcccCCCeEEEeCC-C-CCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEE-Eec--chHhhhhc-cC
Confidence            4457889999999993 4 599999999887 56999999999888888743   3443 221 111  11112221 11


Q ss_pred             CCccEEEeCCCc---hhHHHHHHhhccCCEEEEEee
Q 026217          120 EGINIYFENVGG---KMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       120 ~~~d~v~d~~g~---~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      +.+|+|+....-   ..+..+.+.|+++|+++....
T Consensus        93 ~~~D~i~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  128 (178)
T 3hm2_A           93 DNPDVIFIGGGLTAPGVFAAAWKRLPVGGRLVANAV  128 (178)
T ss_dssp             SCCSEEEECC-TTCTTHHHHHHHTCCTTCEEEEEEC
T ss_pred             CCCCEEEECCcccHHHHHHHHHHhcCCCCEEEEEee
Confidence            479999976643   368899999999999987654

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=97.48  E-value=0.001  Score=51.51  Aligned_cols=74  Identities=12%  Similarity=0.166  Sum_probs=53.0

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      ++.+++|+|+ |++|.++++.+...|++|+++.+++++.+.+.++++....++..+   + +.+.+   +++|++++|++
T Consensus       118 ~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~---~-~~~~~---~~~DivVn~t~  189 (271)
T 1nyt_A          118 PGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALS---M-DELEG---HEFDLIINATS  189 (271)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECC---S-GGGTT---CCCSEEEECCS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEec---H-HHhcc---CCCCEEEECCC
Confidence            5789999997 899999999999999999999999888766654665311111111   1 11111   46999999999


Q ss_pred             ch
Q 026217          131 GK  132 (241)
Q Consensus       131 ~~  132 (241)
                      ..
T Consensus       190 ~~  191 (271)
T 1nyt_A          190 SG  191 (271)
T ss_dssp             CG
T ss_pred             CC
Confidence            53

>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}

Probab=97.48  E-value=0.00029  Score=52.36  Aligned_cols=101  Identities=17%  Similarity=0.224  Sum_probs=69.4

Q ss_pred             HhcCCCCCcEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHc---CCCeeecCCCchhHHHHHHHHCC
Q 026217           45 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEPDLDAALKRYFP  119 (241)
Q Consensus        45 ~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g--~~v~~~~~~~~~~~~~~~~~---g~~~~i~~~~~~~~~~~i~~~~~  119 (241)
                      +...+.++++||..|+ | .|..+..+++..|  .+|++++.+++..+.+++.+   +.+.+ ..... +....+.  ..
T Consensus        71 ~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v-~~~~~-d~~~~~~--~~  144 (215)
T 2yxe_A           71 ELLDLKPGMKVLEIGT-G-CGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNV-IVIVG-DGTLGYE--PL  144 (215)
T ss_dssp             HHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTE-EEEES-CGGGCCG--GG
T ss_pred             HhhCCCCCCEEEEECC-C-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCe-EEEEC-CcccCCC--CC
Confidence            4567889999999994 4 6999999999886  79999999999888877432   33221 11111 1111111  12


Q ss_pred             CCccEEEeCCCc-hhHHHHHHhhccCCEEEEEe
Q 026217          120 EGINIYFENVGG-KMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       120 ~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g  151 (241)
                      +.+|+|+.+..- .....+.+.|+++|+++..-
T Consensus       145 ~~fD~v~~~~~~~~~~~~~~~~L~pgG~lv~~~  177 (215)
T 2yxe_A          145 APYDRIYTTAAGPKIPEPLIRQLKDGGKLLMPV  177 (215)
T ss_dssp             CCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             CCeeEEEECCchHHHHHHHHHHcCCCcEEEEEE
Confidence            379999987764 44468889999999998764

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=97.47  E-value=0.00018  Score=57.39  Aligned_cols=77  Identities=13%  Similarity=0.096  Sum_probs=50.8

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHH----HHHHHHcCCC-e--eecCCCchhHHHHHHHHCCCCcc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKV----DLLKNKFGFD-E--AFNYKEEPDLDAALKRYFPEGIN  123 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~----~~~~~~~g~~-~--~i~~~~~~~~~~~i~~~~~~~~d  123 (241)
                      .+.+|||+||+|.+|...++.+...|++|++++++.++.    +.+.+..+.. .  ..|..+...+.+.+..   +++|
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~~~d   80 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA---HPIT   80 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH---SCCC
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc---cCCc
Confidence            456899999999999999999999999999999765432    2222112221 1  2244443123333332   3699


Q ss_pred             EEEeCCC
Q 026217          124 IYFENVG  130 (241)
Q Consensus       124 ~v~d~~g  130 (241)
                      +|+++++
T Consensus        81 ~vih~A~   87 (341)
T 3enk_A           81 AAIHFAA   87 (341)
T ss_dssp             EEEECCC
T ss_pred             EEEECcc
Confidence            9999997

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=97.47  E-value=0.0003  Score=60.80  Aligned_cols=79  Identities=19%  Similarity=0.282  Sum_probs=51.7

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH---------HHHHHHHH---HcCCCeeecCCCchh---HHHHHH
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK---------DKVDLLKN---KFGFDEAFNYKEEPD---LDAALK  115 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~---------~~~~~~~~---~~g~~~~i~~~~~~~---~~~~i~  115 (241)
                      .+.+++|+||++++|++.++.+...|++|++++++.         ++.+.+.+   ..|...+.|..+..+   +.+.+.
T Consensus         7 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~~~~~~v~~~~   86 (604)
T 2et6_A            7 KDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDKIVETAV   86 (604)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHHH
Confidence            467899999999999999999999999999987643         33332221   334333445444312   333333


Q ss_pred             HHCCCCccEEEeCCC
Q 026217          116 RYFPEGINIYFENVG  130 (241)
Q Consensus       116 ~~~~~~~d~v~d~~g  130 (241)
                      +.. |++|++++++|
T Consensus        87 ~~~-G~iDiLVnNAG  100 (604)
T 2et6_A           87 KNF-GTVHVIINNAG  100 (604)
T ss_dssp             HHH-SCCCEEEECCC
T ss_pred             HHc-CCCCEEEECCC
Confidence            222 47999999998

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=97.47  E-value=0.00033  Score=55.77  Aligned_cols=100  Identities=20%  Similarity=0.116  Sum_probs=64.4

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----CC--Cee--ecCCCchhHHHHHHHHCCCC
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF----GF--DEA--FNYKEEPDLDAALKRYFPEG  121 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~----g~--~~~--i~~~~~~~~~~~i~~~~~~~  121 (241)
                      .++.+|||+||+|.+|..+++.+...|.+|++++++.++.+.+.+.+    +.  ..+  .|..+. +   .+.+... +
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~---~~~~~~~-~   83 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQ-G---AYDEVIK-G   83 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTST-T---TTTTTTT-T
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcCh-H---HHHHHHc-C
Confidence            45779999999999999999998889999999999887765554221    21  111  233332 1   1222221 6


Q ss_pred             ccEEEeCCCch---------------hHHHHHHhhc--c-CCEEEEEeeec
Q 026217          122 INIYFENVGGK---------------MLDAVLLNMR--I-QGRITLCGMIS  154 (241)
Q Consensus       122 ~d~v~d~~g~~---------------~~~~~~~~l~--~-~G~~v~~g~~~  154 (241)
                      +|+||++++..               ....+++.+.  . .++++.++...
T Consensus        84 ~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~  134 (342)
T 1y1p_A           84 AAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTV  134 (342)
T ss_dssp             CSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGG
T ss_pred             CCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHH
Confidence            99999998731               1123444443  2 36899887654

>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*

Probab=97.46  E-value=0.00022  Score=56.47  Aligned_cols=102  Identities=14%  Similarity=0.158  Sum_probs=70.0

Q ss_pred             HHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCCeeecCCCchhHHHHHHHHCC
Q 026217           43 FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEPDLDAALKRYFP  119 (241)
Q Consensus        43 l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~~~i~~~~~~~~~~~i~~~~~  119 (241)
                      +.+...+.++++||-.|. | .|..+..+++..|++|++++.+++..+.+++.+   |...-+..... ++    .+. +
T Consensus        82 ~~~~~~~~~~~~vLDiGc-G-~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~----~~~-~  153 (318)
T 2fk8_A           82 NLDKLDLKPGMTLLDIGC-G-WGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQ-GW----EDF-A  153 (318)
T ss_dssp             HHTTSCCCTTCEEEEESC-T-TSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEES-CG----GGC-C
T ss_pred             HHHhcCCCCcCEEEEEcc-c-chHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEC-Ch----HHC-C
Confidence            334466789999999993 4 488889999888999999999999888887432   32211111111 11    111 2


Q ss_pred             CCccEEEeC-----CCc----hhHHHHHHhhccCCEEEEEee
Q 026217          120 EGINIYFEN-----VGG----KMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       120 ~~~d~v~d~-----~g~----~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      +.+|+|+..     .+.    ..+..+.++|+++|+++....
T Consensus       154 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  195 (318)
T 2fk8_A          154 EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSS  195 (318)
T ss_dssp             CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred             CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence            579999875     331    356778889999999987654

>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}

Probab=97.46  E-value=0.00022  Score=52.10  Aligned_cols=95  Identities=12%  Similarity=0.077  Sum_probs=63.1

Q ss_pred             CCCCCcEEEEEcCCchHHHHHHHHHHHcC----------CEEEEEeCCHHHHHHHHHHcCCCeee---cCCCchhHHHHH
Q 026217           48 SPKQGEYVFVSAASGAVGQLVGQFAKLVG----------CYVVGSAGSKDKVDLLKNKFGFDEAF---NYKEEPDLDAAL  114 (241)
Q Consensus        48 ~~~~~~~vlI~ga~g~~G~~avqla~~~g----------~~v~~~~~~~~~~~~~~~~~g~~~~i---~~~~~~~~~~~i  114 (241)
                      .++++++||..|+ |+ |..+..+++..+          .+|++++.++..      .......+   |..+. +....+
T Consensus        19 ~~~~~~~vLDlGc-G~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~------~~~~~~~~~~~d~~~~-~~~~~~   89 (196)
T 2nyu_A           19 ILRPGLRVLDCGA-AP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF------PLEGATFLCPADVTDP-RTSQRI   89 (196)
T ss_dssp             CCCTTCEEEEETC-CS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC------CCTTCEEECSCCTTSH-HHHHHH
T ss_pred             CCCCCCEEEEeCC-CC-CHHHHHHHHHhccccccccCCCceEEEEechhcc------cCCCCeEEEeccCCCH-HHHHHH
Confidence            4688999999994 65 999999999876          789999987632      01111122   22222 344445


Q ss_pred             HHHCCC-CccEEEe-----CCCc-------------hhHHHHHHhhccCCEEEEEe
Q 026217          115 KRYFPE-GINIYFE-----NVGG-------------KMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       115 ~~~~~~-~~d~v~d-----~~g~-------------~~~~~~~~~l~~~G~~v~~g  151 (241)
                      ....++ .+|+|+.     +++.             ..+..+.+.|+++|+++...
T Consensus        90 ~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~  145 (196)
T 2nyu_A           90 LEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKT  145 (196)
T ss_dssp             HHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             HHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEe
Confidence            555544 8999994     3332             24566788999999998764

>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}

Probab=97.45  E-value=0.0004  Score=51.36  Aligned_cols=98  Identities=12%  Similarity=0.039  Sum_probs=67.8

Q ss_pred             HhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCCe--eecCCCchhHHHHHHHHCC
Q 026217           45 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE--AFNYKEEPDLDAALKRYFP  119 (241)
Q Consensus        45 ~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~~--~i~~~~~~~~~~~i~~~~~  119 (241)
                      +...++++++||-.|+ | .|..+..+++. +.+|++++.+++..+.+++.+   +...  ++..    +..+...  .+
T Consensus        71 ~~l~~~~~~~vLdiG~-G-~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~----d~~~~~~--~~  141 (210)
T 3lbf_A           71 ELLELTPQSRVLEIGT-G-SGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHG----DGWQGWQ--AR  141 (210)
T ss_dssp             HHTTCCTTCEEEEECC-T-TSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES----CGGGCCG--GG
T ss_pred             HhcCCCCCCEEEEEcC-C-CCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEEC----CcccCCc--cC
Confidence            5567899999999994 4 68888888887 789999999999888887432   3321  2211    1111111  12


Q ss_pred             CCccEEEeCCCc-hhHHHHHHhhccCCEEEEEe
Q 026217          120 EGINIYFENVGG-KMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       120 ~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g  151 (241)
                      +.+|+|+....- .....+.+.|+++|+++..-
T Consensus       142 ~~~D~i~~~~~~~~~~~~~~~~L~pgG~lv~~~  174 (210)
T 3lbf_A          142 APFDAIIVTAAPPEIPTALMTQLDEGGILVLPV  174 (210)
T ss_dssp             CCEEEEEESSBCSSCCTHHHHTEEEEEEEEEEE
T ss_pred             CCccEEEEccchhhhhHHHHHhcccCcEEEEEE
Confidence            479999987653 34457889999999988753

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=97.45  E-value=0.00072  Score=54.43  Aligned_cols=37  Identities=14%  Similarity=0.156  Sum_probs=32.6

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHH--cCCEEEEEeCCHH
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKL--VGCYVVGSAGSKD   87 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~--~g~~v~~~~~~~~   87 (241)
                      .+.+|||+||+|.+|...++.+..  .|.+|+++++++.
T Consensus         9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~   47 (362)
T 3sxp_A            9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRS   47 (362)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCc
Confidence            467899999999999999988888  8999999998654

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=97.45  E-value=0.00067  Score=56.53  Aligned_cols=80  Identities=18%  Similarity=0.285  Sum_probs=53.2

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH--HHHHHHHHcCCCe-eecCCCchhHH---HHHHHHCCCCccE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD--KVDLLKNKFGFDE-AFNYKEEPDLD---AALKRYFPEGINI  124 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~--~~~~~~~~~g~~~-~i~~~~~~~~~---~~i~~~~~~~~d~  124 (241)
                      ++.+++|+||+|++|...++.+...|++|+++.+++.  ..+...++.+... ..|..+...+.   +.+.+..++.+|+
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id~  291 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKVDI  291 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCCSE
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCceE
Confidence            5679999999999999999888888999999987542  3333322555432 23444431333   3333333335999


Q ss_pred             EEeCCC
Q 026217          125 YFENVG  130 (241)
Q Consensus       125 v~d~~g  130 (241)
                      +++++|
T Consensus       292 lV~nAG  297 (454)
T 3u0b_A          292 LVNNAG  297 (454)
T ss_dssp             EEECCC
T ss_pred             EEECCc
Confidence            999987

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.44  E-value=0.0015  Score=51.31  Aligned_cols=93  Identities=14%  Similarity=0.041  Sum_probs=62.1

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCC--eeecCCCchhHHHHHHHHCCCCccEEEe
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFD--EAFNYKEEPDLDAALKRYFPEGINIYFE  127 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~g~~--~~i~~~~~~~~~~~i~~~~~~~~d~v~d  127 (241)
                      ++.+++|+|+ |++|.+++..+...|+ +|++..+++++.+.+.++++..  .++      ++ +.+.+.. ..+|+|++
T Consensus       140 ~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~------~~-~~~~~~~-~~aDivIn  210 (297)
T 2egg_A          140 DGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYF------SL-AEAETRL-AEYDIIIN  210 (297)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEE------CH-HHHHHTG-GGCSEEEE
T ss_pred             CCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCcee------eH-HHHHhhh-ccCCEEEE
Confidence            5789999996 9999999999999998 9999999988876666577652  222      12 1222211 25999999


Q ss_pred             CCCchhH------HHHHHhhccCCEEEEEee
Q 026217          128 NVGGKML------DAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       128 ~~g~~~~------~~~~~~l~~~G~~v~~g~  152 (241)
                      |++....      ......++++..++.+..
T Consensus       211 ~t~~~~~~~~~~~~i~~~~l~~~~~v~D~~y  241 (297)
T 2egg_A          211 TTSVGMHPRVEVQPLSLERLRPGVIVSDIIY  241 (297)
T ss_dssp             CSCTTCSSCCSCCSSCCTTCCTTCEEEECCC
T ss_pred             CCCCCCCCCCCCCCCCHHHcCCCCEEEEcCC
Confidence            9985321      011234555555555543

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=97.43  E-value=0.0012  Score=51.96  Aligned_cols=87  Identities=16%  Similarity=0.175  Sum_probs=64.7

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      .|.+|.|+|. |.+|...++.++..|.+|++.++++++ +.+. +.|+...       ++.+.+.     ..|+|+.++.
T Consensus       141 ~g~~vgIiG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~-~~~~-~~g~~~~-------~l~ell~-----~aDvV~l~~p  205 (307)
T 1wwk_A          141 EGKTIGIIGF-GRIGYQVAKIANALGMNILLYDPYPNE-ERAK-EVNGKFV-------DLETLLK-----ESDVVTIHVP  205 (307)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCH-HHHH-HTTCEEC-------CHHHHHH-----HCSEEEECCC
T ss_pred             CCceEEEEcc-CHHHHHHHHHHHHCCCEEEEECCCCCh-hhHh-hcCcccc-------CHHHHHh-----hCCEEEEecC
Confidence            4679999995 999999999999999999999988766 5555 6776321       3333343     3899998876


Q ss_pred             c-h----hH-HHHHHhhccCCEEEEEee
Q 026217          131 G-K----ML-DAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       131 ~-~----~~-~~~~~~l~~~G~~v~~g~  152 (241)
                      . .    .+ ...+..+++++.++.++.
T Consensus       206 ~~~~t~~li~~~~l~~mk~ga~lin~ar  233 (307)
T 1wwk_A          206 LVESTYHLINEERLKLMKKTAILINTSR  233 (307)
T ss_dssp             CSTTTTTCBCHHHHHHSCTTCEEEECSC
T ss_pred             CChHHhhhcCHHHHhcCCCCeEEEECCC
Confidence            3 1    12 456778888888888765

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.43  E-value=0.0037  Score=42.66  Aligned_cols=76  Identities=17%  Similarity=0.163  Sum_probs=53.3

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeee-cCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAF-NYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i-~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      +.+|+|.|+ |.+|...++.+...|.+|+++++++++.+.+++.++...+. +..+.    +.+.+..-.++|+|+.+++
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~----~~l~~~~~~~~d~vi~~~~   78 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKI----KTLEDAGIEDADMYIAVTG   78 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSH----HHHHHTTTTTCSEEEECCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCH----HHHHHcCcccCCEEEEeeC
Confidence            357999996 99999999999889999999999988888777445653221 22222    1222221236999999998


Q ss_pred             ch
Q 026217          131 GK  132 (241)
Q Consensus       131 ~~  132 (241)
                      ..
T Consensus        79 ~~   80 (140)
T 1lss_A           79 KE   80 (140)
T ss_dssp             CH
T ss_pred             Cc
Confidence            64

>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}

Probab=97.42  E-value=0.00052  Score=51.78  Aligned_cols=102  Identities=13%  Similarity=0.116  Sum_probs=69.0

Q ss_pred             cCCCCCcEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHc---CCCeeecCCCchhHHHHHHHHC--C
Q 026217           47 CSPKQGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEPDLDAALKRYF--P  119 (241)
Q Consensus        47 ~~~~~~~~vlI~ga~g~~G~~avqla~~~--g~~v~~~~~~~~~~~~~~~~~---g~~~~i~~~~~~~~~~~i~~~~--~  119 (241)
                      ....++.+||-.|  .+.|..++.+++.+  +.+|++++.+++..+.+++.+   |...-+..... +..+.+..+.  +
T Consensus        68 ~~~~~~~~vLdiG--~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~-d~~~~l~~l~~~~  144 (232)
T 3cbg_A           68 ISLTGAKQVLEIG--VFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLG-PALATLEQLTQGK  144 (232)
T ss_dssp             HHHHTCCEEEEEC--CTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEES-CHHHHHHHHHTSS
T ss_pred             HHhcCCCEEEEec--CCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHHHHhcC
Confidence            3445778999999  45899999999987  569999999999888877333   54321222222 3433344332  1


Q ss_pred             --CCccEEEeCCC-c---hhHHHHHHhhccCCEEEEEe
Q 026217          120 --EGINIYFENVG-G---KMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       120 --~~~d~v~d~~g-~---~~~~~~~~~l~~~G~~v~~g  151 (241)
                        +.||+||-... .   ..+..+.+.|+++|.++...
T Consensus       145 ~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~~  182 (232)
T 3cbg_A          145 PLPEFDLIFIDADKRNYPRYYEIGLNLLRRGGLMVIDN  182 (232)
T ss_dssp             SCCCEEEEEECSCGGGHHHHHHHHHHTEEEEEEEEEEC
T ss_pred             CCCCcCEEEECCCHHHHHHHHHHHHHHcCCCeEEEEeC
Confidence              47999984433 2   35788889999999998753

>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*

Probab=97.42  E-value=0.00031  Score=53.06  Aligned_cols=100  Identities=17%  Similarity=0.273  Sum_probs=69.3

Q ss_pred             HhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCCeeecCCCchhHHHHHHHHCCC-
Q 026217           45 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRYFPE-  120 (241)
Q Consensus        45 ~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~---~g~~~~i~~~~~~~~~~~i~~~~~~-  120 (241)
                      +...+.++++||..|+ | .|..+..+++..+.+|++++.+++..+.+++.   .|...+ ..... +..   .....+ 
T Consensus        85 ~~l~~~~~~~vLdiG~-G-~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v-~~~~~-d~~---~~~~~~~  157 (235)
T 1jg1_A           85 EIANLKPGMNILEVGT-G-SGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNV-HVILG-DGS---KGFPPKA  157 (235)
T ss_dssp             HHHTCCTTCCEEEECC-T-TSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSE-EEEES-CGG---GCCGGGC
T ss_pred             HhcCCCCCCEEEEEeC-C-cCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCc-EEEEC-Ccc---cCCCCCC
Confidence            4557889999999993 4 79999999988778999999999888887743   343221 11111 221   111112 


Q ss_pred             CccEEEeCCCc-hhHHHHHHhhccCCEEEEEe
Q 026217          121 GINIYFENVGG-KMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       121 ~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g  151 (241)
                      ++|+|+.+..- .....+.+.|+++|+++..-
T Consensus       158 ~fD~Ii~~~~~~~~~~~~~~~L~pgG~lvi~~  189 (235)
T 1jg1_A          158 PYDVIIVTAGAPKIPEPLIEQLKIGGKLIIPV  189 (235)
T ss_dssp             CEEEEEECSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             CccEEEECCcHHHHHHHHHHhcCCCcEEEEEE
Confidence            59999987664 45568889999999988753

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=97.40  E-value=0.0012  Score=51.89  Aligned_cols=91  Identities=16%  Similarity=0.220  Sum_probs=58.5

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHH--HcCCCe-eecCCCchhHHHHHHHHCCCCccE
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS-----KDKVDLLKN--KFGFDE-AFNYKEEPDLDAALKRYFPEGINI  124 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~-----~~~~~~~~~--~~g~~~-~i~~~~~~~~~~~i~~~~~~~~d~  124 (241)
                      .+|+|+||+|.+|...++.+...|.+|++++++     +++.+.+++  ..+... ..|..+..++...+    . ++|+
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~----~-~~d~   79 (313)
T 1qyd_A            5 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDAL----K-QVDV   79 (313)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHH----T-TCSE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHH----h-CCCE
Confidence            569999999999999999998899999999987     444444430  223321 23444431233332    2 5999


Q ss_pred             EEeCCCch-------hHHHHHHhhccCC---EEE
Q 026217          125 YFENVGGK-------MLDAVLLNMRIQG---RIT  148 (241)
Q Consensus       125 v~d~~g~~-------~~~~~~~~l~~~G---~~v  148 (241)
                      ||++++..       ....+++.+...|   +++
T Consensus        80 vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v  113 (313)
T 1qyd_A           80 VISALAGGVLSHHILEQLKLVEAIKEAGNIKRFL  113 (313)
T ss_dssp             EEECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEE
T ss_pred             EEECCccccchhhHHHHHHHHHHHHhcCCCceEE
Confidence            99998732       2344555554433   666

>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}

Probab=97.40  E-value=0.0006  Score=52.05  Aligned_cols=102  Identities=13%  Similarity=0.106  Sum_probs=71.2

Q ss_pred             HhcCCCCCcEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHc----CCCeeecCCCchhHHHHHHHHC
Q 026217           45 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKNKF----GFDEAFNYKEEPDLDAALKRYF  118 (241)
Q Consensus        45 ~~~~~~~~~~vlI~ga~g~~G~~avqla~~~--g~~v~~~~~~~~~~~~~~~~~----g~~~~i~~~~~~~~~~~i~~~~  118 (241)
                      ....+.++++||..|+ | .|..+..+++..  +.+|++++.+++..+.+++.+    |.+.+ ..... ++.+.  ...
T Consensus        90 ~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v-~~~~~-d~~~~--~~~  163 (258)
T 2pwy_A           90 TLLDLAPGMRVLEAGT-G-SGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENV-RFHLG-KLEEA--ELE  163 (258)
T ss_dssp             HHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCE-EEEES-CGGGC--CCC
T ss_pred             HHcCCCCCCEEEEECC-C-cCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCE-EEEEC-chhhc--CCC
Confidence            4567899999999994 5 488999999886  569999999999888887433    53221 11111 11111  112


Q ss_pred             CCCccEEEeCCCc--hhHHHHHHhhccCCEEEEEee
Q 026217          119 PEGINIYFENVGG--KMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       119 ~~~~d~v~d~~g~--~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      ++.+|+|+.....  ..+..+.+.|+++|+++.+..
T Consensus       164 ~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  199 (258)
T 2pwy_A          164 EAAYDGVALDLMEPWKVLEKAALALKPDRFLVAYLP  199 (258)
T ss_dssp             TTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred             CCCcCEEEECCcCHHHHHHHHHHhCCCCCEEEEEeC
Confidence            2479999876653  578899999999999988743

>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}

Probab=97.40  E-value=0.0011  Score=50.18  Aligned_cols=101  Identities=11%  Similarity=0.075  Sum_probs=67.7

Q ss_pred             cCCCCCcEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHH---cCCCeeecCCCchhHHHHHHHHC---
Q 026217           47 CSPKQGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRYF---  118 (241)
Q Consensus        47 ~~~~~~~~vlI~ga~g~~G~~avqla~~~--g~~v~~~~~~~~~~~~~~~~---~g~~~~i~~~~~~~~~~~i~~~~---  118 (241)
                      ....++.+||-.|  ++.|..++.+++.+  +.+|++++.+++..+.+++.   .|...-+..... +..+.+....   
T Consensus        66 ~~~~~~~~VLeiG--~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~g-da~~~l~~l~~~~  142 (237)
T 3c3y_A           66 LKLVNAKKTIEVG--VFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIES-DAMLALDNLLQGQ  142 (237)
T ss_dssp             HHHTTCCEEEEEC--CTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEES-CHHHHHHHHHHST
T ss_pred             HHhhCCCEEEEeC--CCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHHHHhcc
Confidence            3445778999998  56788888999887  57999999999988887743   354321222111 3333333331   


Q ss_pred             --CCCccEEEeCCCc----hhHHHHHHhhccCCEEEEE
Q 026217          119 --PEGINIYFENVGG----KMLDAVLLNMRIQGRITLC  150 (241)
Q Consensus       119 --~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~  150 (241)
                        .+.+|+||-....    ..+..+.+.|++||.++.-
T Consensus       143 ~~~~~fD~I~~d~~~~~~~~~l~~~~~~L~pGG~lv~d  180 (237)
T 3c3y_A          143 ESEGSYDFGFVDADKPNYIKYHERLMKLVKVGGIVAYD  180 (237)
T ss_dssp             TCTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CCCCCcCEEEECCchHHHHHHHHHHHHhcCCCeEEEEe
Confidence              3479999854432    3577888999999988764

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=97.39  E-value=0.00055  Score=53.69  Aligned_cols=92  Identities=14%  Similarity=0.184  Sum_probs=58.9

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH-------HHHHHHHH--HcCCCe-eecCCCchhHHHHHHHHCCCC
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK-------DKVDLLKN--KFGFDE-AFNYKEEPDLDAALKRYFPEG  121 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~-------~~~~~~~~--~~g~~~-~i~~~~~~~~~~~i~~~~~~~  121 (241)
                      +.+|+|+||+|.+|...++.+...|.+|+++++++       ++.+.+++  ..++.. ..|..+...+...++     +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~-----~   76 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIK-----Q   76 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHT-----T
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHh-----C
Confidence            35699999999999999998888899999999876       44443330  334432 235544312332222     5


Q ss_pred             ccEEEeCCCc---hhHHHHHHhhcc-C--CEEE
Q 026217          122 INIYFENVGG---KMLDAVLLNMRI-Q--GRIT  148 (241)
Q Consensus       122 ~d~v~d~~g~---~~~~~~~~~l~~-~--G~~v  148 (241)
                      +|+||++++.   .....+++.+.. +  .+++
T Consensus        77 ~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v  109 (307)
T 2gas_A           77 VDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFF  109 (307)
T ss_dssp             CSEEEECSSSSCGGGHHHHHHHHHHHCCCSEEE
T ss_pred             CCEEEECCcccccccHHHHHHHHHhcCCceEEe
Confidence            9999999984   233444554543 2  4665

>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*

Probab=97.37  E-value=0.0016  Score=49.64  Aligned_cols=101  Identities=11%  Similarity=0.071  Sum_probs=67.8

Q ss_pred             cCCCCCcEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHH---cCCCeeecCCCchhHHHHHHHHC---
Q 026217           47 CSPKQGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRYF---  118 (241)
Q Consensus        47 ~~~~~~~~vlI~ga~g~~G~~avqla~~~--g~~v~~~~~~~~~~~~~~~~---~g~~~~i~~~~~~~~~~~i~~~~---  118 (241)
                      ....++.+||-.|  .+.|..++.+++.+  +.+|++++.+++..+.+++.   .|...-+..... +..+.+....   
T Consensus        75 ~~~~~~~~VLeiG--~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~g-da~~~l~~l~~~~  151 (247)
T 1sui_A           75 LKLINAKNTMEIG--VYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREG-PALPVLDEMIKDE  151 (247)
T ss_dssp             HHHTTCCEEEEEC--CGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEES-CHHHHHHHHHHSG
T ss_pred             HHhhCcCEEEEeC--CCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEEC-CHHHHHHHHHhcc
Confidence            3445678999998  67888899999987  57999999999888877743   344221212111 3333333221   


Q ss_pred             --CCCccEEEeCCC----chhHHHHHHhhccCCEEEEE
Q 026217          119 --PEGINIYFENVG----GKMLDAVLLNMRIQGRITLC  150 (241)
Q Consensus       119 --~~~~d~v~d~~g----~~~~~~~~~~l~~~G~~v~~  150 (241)
                        .+.||+||-...    ...+..+.+.|++||.++.-
T Consensus       152 ~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d  189 (247)
T 1sui_A          152 KNHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYD  189 (247)
T ss_dssp             GGTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEE
T ss_pred             CCCCCEEEEEEcCchHHHHHHHHHHHHhCCCCeEEEEe
Confidence              347999985433    14677888999999999864

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=97.37  E-value=0.00018  Score=57.32  Aligned_cols=78  Identities=13%  Similarity=0.109  Sum_probs=50.4

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH----HHHHHHHc------CCC-e--eecCCCchhHHHHHHHHC
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK----VDLLKNKF------GFD-E--AFNYKEEPDLDAALKRYF  118 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~----~~~~~~~~------g~~-~--~i~~~~~~~~~~~i~~~~  118 (241)
                      +.+++|+||+|++|.++++.+...|++|+.+.++..+    .+.++ ..      +.. .  ..|..+..++...+.+..
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWE-AARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHH-HHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHH-HhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            5689999999999999999999999987777654322    12222 22      121 1  235555423444444443


Q ss_pred             CCCccEEEeCCC
Q 026217          119 PEGINIYFENVG  130 (241)
Q Consensus       119 ~~~~d~v~d~~g  130 (241)
                      .+++|++++++|
T Consensus        81 ~g~iD~lVnnAG   92 (327)
T 1jtv_A           81 EGRVDVLVCNAG   92 (327)
T ss_dssp             TSCCSEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence            357999999987

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=97.36  E-value=0.0011  Score=52.21  Aligned_cols=92  Identities=12%  Similarity=0.123  Sum_probs=51.2

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCc
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG  131 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~  131 (241)
                      +.+|||+||+|.+|...++.+...|.+|++++++.++    . .   ....|..+...+.+.+...   ++|+||++++.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~----~-~---~~~~Dl~d~~~~~~~~~~~---~~d~vih~A~~   70 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR----P-K---FEQVNLLDSNAVHHIIHDF---QPHVIVHCAAE   70 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC--------------------------CHHHHHHH---CCSEEEECC--
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC----C-C---eEEecCCCHHHHHHHHHhh---CCCEEEECCcc
Confidence            4689999999999999999998899999999976543    1 1   0112222221233333322   58999999873


Q ss_pred             hh------------------HHHHHHhhc-cCCEEEEEeeec
Q 026217          132 KM------------------LDAVLLNMR-IQGRITLCGMIS  154 (241)
Q Consensus       132 ~~------------------~~~~~~~l~-~~G~~v~~g~~~  154 (241)
                      ..                  ...+++.+. .+++++.++...
T Consensus        71 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~  112 (315)
T 2ydy_A           71 RRPDVVENQPDAASQLNVDASGNLAKEAAAVGAFLIYISSDY  112 (315)
T ss_dssp             -----------------CHHHHHHHHHHHHHTCEEEEEEEGG
T ss_pred             cChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchHH
Confidence            11                  122333333 357888887654

>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1

Probab=97.36  E-value=0.0005  Score=51.57  Aligned_cols=103  Identities=10%  Similarity=0.053  Sum_probs=68.9

Q ss_pred             hcCCCCCcEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHc---CCCeeecCCCchhHHHHHHHHC--
Q 026217           46 VCSPKQGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEPDLDAALKRYF--  118 (241)
Q Consensus        46 ~~~~~~~~~vlI~ga~g~~G~~avqla~~~--g~~v~~~~~~~~~~~~~~~~~---g~~~~i~~~~~~~~~~~i~~~~--  118 (241)
                      .....++.+||-.|  .+.|..++.+++..  +.+|++++.+++..+.+++.+   |...-+..... +..+.+....  
T Consensus        64 l~~~~~~~~vLdiG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~-d~~~~~~~~~~~  140 (229)
T 2avd_A           64 LARLIQAKKALDLG--TFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLK-PALETLDELLAA  140 (229)
T ss_dssp             HHHHTTCCEEEEEC--CTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEES-CHHHHHHHHHHT
T ss_pred             HHHhcCCCEEEEEc--CCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEc-CHHHHHHHHHhc
Confidence            34556788999999  44889999999886  569999999998888877433   44211111111 3333333322  


Q ss_pred             C--CCccEEEeCCCc----hhHHHHHHhhccCCEEEEEe
Q 026217          119 P--EGINIYFENVGG----KMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       119 ~--~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~g  151 (241)
                      +  +.+|+|+-....    ..+..+.+.|+++|.++...
T Consensus       141 ~~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~  179 (229)
T 2avd_A          141 GEAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLR  179 (229)
T ss_dssp             TCTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEC
Confidence            1  469998754432    46788889999999998754

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=97.36  E-value=0.0019  Score=54.38  Aligned_cols=80  Identities=19%  Similarity=0.233  Sum_probs=53.9

Q ss_pred             CCC--cEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHH-------HHHHHHHHcCCCe---eecCCCchhHHHHHHH
Q 026217           50 KQG--EYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKD-------KVDLLKNKFGFDE---AFNYKEEPDLDAALKR  116 (241)
Q Consensus        50 ~~~--~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~-------~~~~~~~~~g~~~---~i~~~~~~~~~~~i~~  116 (241)
                      +++  .++||+||+|++|...++.+...|+ +|+.+.++..       -.+.++ ..|...   ..|..+...+...+.+
T Consensus       235 ~~~~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~-~~g~~v~~~~~Dvtd~~~v~~~~~~  313 (496)
T 3mje_A          235 RPPVHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELE-QLGVRVTIAACDAADREALAALLAE  313 (496)
T ss_dssp             CCCCCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHH-HTTCEEEEEECCTTCHHHHHHHHHT
T ss_pred             CCCCCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHH-hcCCeEEEEEccCCCHHHHHHHHHH
Confidence            455  8999999999999999888888899 8888887632       123334 456532   2344444234444444


Q ss_pred             HCC-CCccEEEeCCC
Q 026217          117 YFP-EGINIYFENVG  130 (241)
Q Consensus       117 ~~~-~~~d~v~d~~g  130 (241)
                      ... +++|.+|++.|
T Consensus       314 i~~~g~ld~vVh~AG  328 (496)
T 3mje_A          314 LPEDAPLTAVFHSAG  328 (496)
T ss_dssp             CCTTSCEEEEEECCC
T ss_pred             HHHhCCCeEEEECCc
Confidence            333 37999999987

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=97.36  E-value=0.001  Score=54.06  Aligned_cols=80  Identities=14%  Similarity=0.061  Sum_probs=52.6

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHH-cCCEEEEEeCCHHH----------------HHHHHHHcCCCe---eecCCCchh
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKL-VGCYVVGSAGSKDK----------------VDLLKNKFGFDE---AFNYKEEPD  109 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~-~g~~v~~~~~~~~~----------------~~~~~~~~g~~~---~i~~~~~~~  109 (241)
                      ..+.++||+||++++|++.++.+.. .|++|+++.++.+.                .+.++ ..|...   ..|-.+...
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~-~~G~~a~~i~~Dvtd~~~  123 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAA-QKGLYAKSINGDAFSDEI  123 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHH-HTTCCEEEEESCTTSHHH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHH-hcCCceEEEECCCCCHHH
Confidence            5678899999999999998888888 99999998765332                12334 555432   224444312


Q ss_pred             H---HHHHHHHCCCCccEEEeCCCc
Q 026217          110 L---DAALKRYFPEGINIYFENVGG  131 (241)
Q Consensus       110 ~---~~~i~~~~~~~~d~v~d~~g~  131 (241)
                      .   .+.+.+.. |++|++++++|.
T Consensus       124 v~~~v~~i~~~~-G~IDiLVNNAG~  147 (405)
T 3zu3_A          124 KQLTIDAIKQDL-GQVDQVIYSLAS  147 (405)
T ss_dssp             HHHHHHHHHHHT-SCEEEEEECCCC
T ss_pred             HHHHHHHHHHHc-CCCCEEEEcCcc
Confidence            2   23333333 479999999874

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.35  E-value=0.0011  Score=53.51  Aligned_cols=91  Identities=12%  Similarity=0.131  Sum_probs=63.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCch-
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGK-  132 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~-  132 (241)
                      +|+|+|| |.+|..+++.+.. ...|.+.+++.++.+.++ +......+|..+...+.+.++     ++|+|++|++.. 
T Consensus        18 kilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~-~~~~~~~~d~~d~~~l~~~~~-----~~DvVi~~~p~~~   89 (365)
T 3abi_A           18 KVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK-EFATPLKVDASNFDKLVEVMK-----EFELVIGALPGFL   89 (365)
T ss_dssp             EEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT-TTSEEEECCTTCHHHHHHHHT-----TCSEEEECCCGGG
T ss_pred             EEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh-ccCCcEEEecCCHHHHHHHHh-----CCCEEEEecCCcc
Confidence            6999997 9999988887643 468999999999888887 543333445544312333332     489999999964 


Q ss_pred             hHHHHHHhhccCCEEEEEee
Q 026217          133 MLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       133 ~~~~~~~~l~~~G~~v~~g~  152 (241)
                      ....+-.|+..+-.++.++.
T Consensus        90 ~~~v~~~~~~~g~~yvD~s~  109 (365)
T 3abi_A           90 GFKSIKAAIKSKVDMVDVSF  109 (365)
T ss_dssp             HHHHHHHHHHHTCEEEECCC
T ss_pred             cchHHHHHHhcCcceEeeec
Confidence            44455556677778887654

>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*

Probab=97.33  E-value=0.0009  Score=49.93  Aligned_cols=104  Identities=13%  Similarity=0.052  Sum_probs=68.3

Q ss_pred             HhcCCCCCcEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHH---cCCCeeecCCCchhHHHHHHHHC-
Q 026217           45 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRYF-  118 (241)
Q Consensus        45 ~~~~~~~~~~vlI~ga~g~~G~~avqla~~~--g~~v~~~~~~~~~~~~~~~~---~g~~~~i~~~~~~~~~~~i~~~~-  118 (241)
                      ......++.+||-.|  .+.|..++.+++..  +.+|++++.+++..+.+++.   .|...-+..... +..+.+.... 
T Consensus        52 ~l~~~~~~~~vLdiG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~~~~~~~  128 (223)
T 3duw_A           52 LLVQIQGARNILEIG--TLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTG-LALDSLQQIEN  128 (223)
T ss_dssp             HHHHHHTCSEEEEEC--CTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES-CHHHHHHHHHH
T ss_pred             HHHHhhCCCEEEEec--CCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHHHHh
Confidence            334556789999998  55788888999887  57999999999888777633   344321111111 3333333221 


Q ss_pred             --CCCccEEEeCCCc----hhHHHHHHhhccCCEEEEEe
Q 026217          119 --PEGINIYFENVGG----KMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       119 --~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~g  151 (241)
                        .+.+|+|+-....    ..+..+.+.|+++|.++...
T Consensus       129 ~~~~~fD~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~  167 (223)
T 3duw_A          129 EKYEPFDFIFIDADKQNNPAYFEWALKLSRPGTVIIGDN  167 (223)
T ss_dssp             TTCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEES
T ss_pred             cCCCCcCEEEEcCCcHHHHHHHHHHHHhcCCCcEEEEeC
Confidence              1469999854432    35778889999999887653

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=97.33  E-value=7.9e-05  Score=56.46  Aligned_cols=97  Identities=15%  Similarity=0.106  Sum_probs=60.7

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHcCCCe-eecCCCchhHHHHHHHHCCCCccEEEeC
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFEN  128 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~--~v~~~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~i~~~~~~~~d~v~d~  128 (241)
                      +.+++|+||+|++|...++.+...|+  +|+++++++++.+... .-+... ..|..+.    +.+.+... ++|+++++
T Consensus        18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~d~----~~~~~~~~-~~d~vi~~   91 (242)
T 2bka_A           18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-YKNVNQEVVDFEKL----DDYASAFQ-GHDVGFCC   91 (242)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-GGGCEEEECCGGGG----GGGGGGGS-SCSEEEEC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc-cCCceEEecCcCCH----HHHHHHhc-CCCEEEEC
Confidence            57899999999999999999989999  9999998765433221 112211 1232222    12222222 69999999


Q ss_pred             CCchh---------------HHHHHHhhcc--CCEEEEEeeec
Q 026217          129 VGGKM---------------LDAVLLNMRI--QGRITLCGMIS  154 (241)
Q Consensus       129 ~g~~~---------------~~~~~~~l~~--~G~~v~~g~~~  154 (241)
                      +|...               ...+++.+..  .++++.++...
T Consensus        92 ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~  134 (242)
T 2bka_A           92 LGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKG  134 (242)
T ss_dssp             CCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred             CCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCc
Confidence            98421               1233334433  36898887754

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=97.33  E-value=0.0019  Score=54.60  Aligned_cols=78  Identities=19%  Similarity=0.248  Sum_probs=53.7

Q ss_pred             CCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHH---H----HHHHHHcCCCe---eecCCCchhHHHHHHHH
Q 026217           49 PKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDK---V----DLLKNKFGFDE---AFNYKEEPDLDAALKRY  117 (241)
Q Consensus        49 ~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~---~----~~~~~~~g~~~---~i~~~~~~~~~~~i~~~  117 (241)
                      ++++.++||+||+|++|...++.+...|+ +|+.++++...   .    +.++ ..|...   ..|..+...+...+.. 
T Consensus       256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~-~~g~~v~~~~~Dvtd~~~v~~~~~~-  333 (511)
T 2z5l_A          256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELR-GHGCEVVHAACDVAERDALAALVTA-  333 (511)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHH-TTTCEEEEEECCSSCHHHHHHHHHH-
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHH-hcCCEEEEEEeCCCCHHHHHHHHhc-
Confidence            46788999999999999999988888899 79999887531   2    2233 345421   1344444133333333 


Q ss_pred             CCCCccEEEeCCC
Q 026217          118 FPEGINIYFENVG  130 (241)
Q Consensus       118 ~~~~~d~v~d~~g  130 (241)
                        +.+|.||++.|
T Consensus       334 --~~ld~VVh~AG  344 (511)
T 2z5l_A          334 --YPPNAVFHTAG  344 (511)
T ss_dssp             --SCCSEEEECCC
T ss_pred             --CCCcEEEECCc
Confidence              47999999987

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=97.32  E-value=0.0013  Score=51.89  Aligned_cols=74  Identities=8%  Similarity=0.162  Sum_probs=49.2

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe-eecCCCchhHHHHHHHHCCCCccEEEeC
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFEN  128 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~i~~~~~~~~d~v~d~  128 (241)
                      ++..+|||+||+|.+|..+++.+...|.+|++++++++. +    .++... ..|..+...+.+.+..   +++|+||++
T Consensus        10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~----~l~~~~~~~Dl~d~~~~~~~~~~---~~~d~vih~   81 (321)
T 2pk3_A           10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-K----LPNVEMISLDIMDSQRVKKVISD---IKPDYIFHL   81 (321)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-C----CTTEEEEECCTTCHHHHHHHHHH---HCCSEEEEC
T ss_pred             cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-c----cceeeEEECCCCCHHHHHHHHHh---cCCCEEEEc
Confidence            456789999999999999999998899999999987654 2    122211 2244443123333332   259999999


Q ss_pred             CCc
Q 026217          129 VGG  131 (241)
Q Consensus       129 ~g~  131 (241)
                      ++.
T Consensus        82 A~~   84 (321)
T 2pk3_A           82 AAK   84 (321)
T ss_dssp             CSC
T ss_pred             Ccc
Confidence            873

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.32  E-value=0.0029  Score=46.82  Aligned_cols=76  Identities=11%  Similarity=0.059  Sum_probs=54.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC-----CCeeecCCCchhHHHHHHHHCCCCccEEEeC
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFG-----FDEAFNYKEEPDLDAALKRYFPEGINIYFEN  128 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g-----~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~  128 (241)
                      +|+|+||+|.+|...+..+...|.+|++.++++++.+.+.+.++     .+  +..  . ++.+.+.     ++|+|+.|
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~--~-~~~~~~~-----~~D~Vi~~   71 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDAS--ITG--M-KNEDAAE-----ACDIAVLT   71 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCC--EEE--E-EHHHHHH-----HCSEEEEC
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCC--CCh--h-hHHHHHh-----cCCEEEEe
Confidence            58899977999999888888889999999999888776663444     11  111  2 4444444     38999999


Q ss_pred             CCchhHHHHHH
Q 026217          129 VGGKMLDAVLL  139 (241)
Q Consensus       129 ~g~~~~~~~~~  139 (241)
                      +........+.
T Consensus        72 ~~~~~~~~~~~   82 (212)
T 1jay_A           72 IPWEHAIDTAR   82 (212)
T ss_dssp             SCHHHHHHHHH
T ss_pred             CChhhHHHHHH
Confidence            98654444443

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.31  E-value=0.00027  Score=53.47  Aligned_cols=73  Identities=15%  Similarity=0.091  Sum_probs=48.7

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHC-CCCccEEEeCCC
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYF-PEGINIYFENVG  130 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~-~~~~d~v~d~~g  130 (241)
                      +.+++|+||+|++|...++.+...|++|++++++++    .. ++- ....|..+..++.+.+.+.. .+++|++++++|
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~----~~-~~~-~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~ag   75 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE----GE-DLI-YVEGDVTREEDVRRAVARAQEEAPLFAVVSAAG   75 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC----SS-SSE-EEECCTTCHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc----cc-ceE-EEeCCCCCHHHHHHHHHHHHhhCCceEEEEccc
Confidence            468999999999999999988888999999998754    11 210 01234444323333333320 126999999887

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=97.31  E-value=0.0017  Score=53.39  Aligned_cols=83  Identities=13%  Similarity=0.061  Sum_probs=51.8

Q ss_pred             CCCCCcEEEEEcCCchHHHH--HHHHHHHcCCEEEEEeCCH---------------HHHH-HHHHHcCCCe---eecCCC
Q 026217           48 SPKQGEYVFVSAASGAVGQL--VGQFAKLVGCYVVGSAGSK---------------DKVD-LLKNKFGFDE---AFNYKE  106 (241)
Q Consensus        48 ~~~~~~~vlI~ga~g~~G~~--avqla~~~g~~v~~~~~~~---------------~~~~-~~~~~~g~~~---~i~~~~  106 (241)
                      .+..+.+++|+||++++|++  .+......|++|++++++.               +..+ .++ +.|...   ..|..+
T Consensus        56 ~~~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~Dvtd  134 (418)
T 4eue_A           56 GFRGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAK-KKGLVAKNFIEDAFS  134 (418)
T ss_dssp             CCCCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHH-HTTCCEEEEESCTTC
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHH-HcCCcEEEEEeeCCC
Confidence            35678999999999999998  5554445599999998753               2222 233 555431   234444


Q ss_pred             chhHHHHHHHHC--CCCccEEEeCCCc
Q 026217          107 EPDLDAALKRYF--PEGINIYFENVGG  131 (241)
Q Consensus       107 ~~~~~~~i~~~~--~~~~d~v~d~~g~  131 (241)
                      ..+....+....  -|++|++++++|.
T Consensus       135 ~~~v~~~v~~i~~~~G~IDiLVnNAG~  161 (418)
T 4eue_A          135 NETKDKVIKYIKDEFGKIDLFVYSLAA  161 (418)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCcc
Confidence            323333333221  1479999999874

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=97.30  E-value=0.0013  Score=51.94  Aligned_cols=91  Identities=12%  Similarity=0.135  Sum_probs=58.5

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH------HHHHHHHH--HcCCCe-eecCCCchhHHHHHHHHCCCCcc
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK------DKVDLLKN--KFGFDE-AFNYKEEPDLDAALKRYFPEGIN  123 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~------~~~~~~~~--~~g~~~-~i~~~~~~~~~~~i~~~~~~~~d  123 (241)
                      .+|+|+||+|.+|...++.+...|.+|+++++++      ++.+.+.+  ..++.. ..|..+...+...+    . ++|
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~----~-~~d   79 (321)
T 3c1o_A            5 EKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVL----K-QVD   79 (321)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHH----T-TCS
T ss_pred             cEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHH----c-CCC
Confidence            4699999999999999999988999999999875      33333320  234432 23554431233322    2 499


Q ss_pred             EEEeCCCc---hhHHHHHHhhccC---CEEE
Q 026217          124 IYFENVGG---KMLDAVLLNMRIQ---GRIT  148 (241)
Q Consensus       124 ~v~d~~g~---~~~~~~~~~l~~~---G~~v  148 (241)
                      +||++++.   .....+++.+...   ++++
T Consensus        80 ~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v  110 (321)
T 3c1o_A           80 IVISALPFPMISSQIHIINAIKAAGNIKRFL  110 (321)
T ss_dssp             EEEECCCGGGSGGGHHHHHHHHHHCCCCEEE
T ss_pred             EEEECCCccchhhHHHHHHHHHHhCCccEEe
Confidence            99999984   2344555555443   3665

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=97.30  E-value=0.0003  Score=55.91  Aligned_cols=78  Identities=12%  Similarity=0.125  Sum_probs=49.7

Q ss_pred             CCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHHc----CCC-eeecCCCchhHHHHHHHHCCCC
Q 026217           49 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK--VDLLKNKF----GFD-EAFNYKEEPDLDAALKRYFPEG  121 (241)
Q Consensus        49 ~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~--~~~~~~~~----g~~-~~i~~~~~~~~~~~i~~~~~~~  121 (241)
                      -.++.+|||+||+|.+|..+++.+...|.+|+++++++++  .+.+. .+    +.. ...|..+...+.+.+...   +
T Consensus        11 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---~   86 (335)
T 1rpn_A           11 GSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLR-ELGIEGDIQYEDGDMADACSVQRAVIKA---Q   86 (335)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHH-HTTCGGGEEEEECCTTCHHHHHHHHHHH---C
T ss_pred             cccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchh-hccccCceEEEECCCCCHHHHHHHHHHc---C
Confidence            4678899999999999999999998899999999987543  12232 22    111 122444431333333322   5


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|+||++++
T Consensus        87 ~d~Vih~A~   95 (335)
T 1rpn_A           87 PQEVYNLAA   95 (335)
T ss_dssp             CSEEEECCS
T ss_pred             CCEEEECcc
Confidence            899999987

>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*

Probab=97.30  E-value=0.0018  Score=49.58  Aligned_cols=95  Identities=20%  Similarity=0.200  Sum_probs=65.2

Q ss_pred             CCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCCeeecCCCchhHHHHHHHHCCCCccEE
Q 026217           49 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRYFPEGINIY  125 (241)
Q Consensus        49 ~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~---~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v  125 (241)
                      +.++++||-.|. |. |..++.+++ .|.+|++++.++...+.+++.   .+..  +..... ++.+.+   ..+.+|+|
T Consensus       118 ~~~~~~VLDiGc-G~-G~l~~~la~-~g~~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~-d~~~~~---~~~~fD~V  188 (254)
T 2nxc_A          118 LRPGDKVLDLGT-GS-GVLAIAAEK-LGGKALGVDIDPMVLPQAEANAKRNGVR--PRFLEG-SLEAAL---PFGPFDLL  188 (254)
T ss_dssp             CCTTCEEEEETC-TT-SHHHHHHHH-TTCEEEEEESCGGGHHHHHHHHHHTTCC--CEEEES-CHHHHG---GGCCEEEE
T ss_pred             cCCCCEEEEecC-CC-cHHHHHHHH-hCCeEEEEECCHHHHHHHHHHHHHcCCc--EEEEEC-ChhhcC---cCCCCCEE
Confidence            678999999993 44 777777666 567999999999888877733   2332  222122 333322   23479999


Q ss_pred             EeCCCc----hhHHHHHHhhccCCEEEEEee
Q 026217          126 FENVGG----KMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       126 ~d~~g~----~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      +.....    ..+..+.++|+++|+++..+.
T Consensus       189 v~n~~~~~~~~~l~~~~~~LkpgG~lils~~  219 (254)
T 2nxc_A          189 VANLYAELHAALAPRYREALVPGGRALLTGI  219 (254)
T ss_dssp             EEECCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             EECCcHHHHHHHHHHHHHHcCCCCEEEEEee
Confidence            875532    456778889999999998765

>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0

Probab=97.29  E-value=0.00089  Score=50.02  Aligned_cols=102  Identities=11%  Similarity=0.097  Sum_probs=67.8

Q ss_pred             cCCCCCcEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHc---CCCeeecCCCchhHHHHHHHHCC--
Q 026217           47 CSPKQGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEPDLDAALKRYFP--  119 (241)
Q Consensus        47 ~~~~~~~~vlI~ga~g~~G~~avqla~~~--g~~v~~~~~~~~~~~~~~~~~---g~~~~i~~~~~~~~~~~i~~~~~--  119 (241)
                      ....++.+||-.|  .+.|..++.+++.+  +.+|++++.+++..+.+++.+   |...-+..... +..+.+.....  
T Consensus        60 ~~~~~~~~vLdiG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~~~~~~~~~  136 (225)
T 3tr6_A           60 VKLMQAKKVIDIG--TFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLS-PAKDTLAELIHAG  136 (225)
T ss_dssp             HHHHTCSEEEEEC--CTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES-CHHHHHHHHHTTT
T ss_pred             HHhhCCCEEEEeC--CcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeC-CHHHHHHHhhhcc
Confidence            3456788999998  45688888999886  569999999999888877433   44321111111 33333333321  


Q ss_pred             --CCccEEEeCCCc----hhHHHHHHhhccCCEEEEEe
Q 026217          120 --EGINIYFENVGG----KMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       120 --~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~g  151 (241)
                        +.+|+|+-....    ..+..+.+.|+++|.++...
T Consensus       137 ~~~~fD~v~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~  174 (225)
T 3tr6_A          137 QAWQYDLIYIDADKANTDLYYEESLKLLREGGLIAVDN  174 (225)
T ss_dssp             CTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCCccEEEECCCHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence              479999854432    35678889999999998753

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=97.29  E-value=0.0017  Score=54.58  Aligned_cols=81  Identities=16%  Similarity=0.182  Sum_probs=54.9

Q ss_pred             CCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHH---H----HHHHHHcCCCe---eecCCCchhHHHHHHHH
Q 026217           49 PKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDK---V----DLLKNKFGFDE---AFNYKEEPDLDAALKRY  117 (241)
Q Consensus        49 ~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~---~----~~~~~~~g~~~---~i~~~~~~~~~~~i~~~  117 (241)
                      ++++.++||+||+|++|...++.+...|+ +|+.++++...   .    +.++ ..|...   ..|..+...+...+...
T Consensus       223 ~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~-~~g~~v~~~~~Dv~d~~~v~~~~~~i  301 (486)
T 2fr1_A          223 WKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELE-ALGARTTVAACDVTDRESVRELLGGI  301 (486)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHH-HTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHH-hcCCEEEEEEeCCCCHHHHHHHHHHH
Confidence            56789999999999999998888888899 59999987641   1    2233 445431   23444442344444443


Q ss_pred             CC-CCccEEEeCCC
Q 026217          118 FP-EGINIYFENVG  130 (241)
Q Consensus       118 ~~-~~~d~v~d~~g  130 (241)
                      .. +.+|.||++.|
T Consensus       302 ~~~g~ld~VIh~AG  315 (486)
T 2fr1_A          302 GDDVPLSAVFHAAA  315 (486)
T ss_dssp             CTTSCEEEEEECCC
T ss_pred             HhcCCCcEEEECCc
Confidence            22 37899999998

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=97.29  E-value=0.00075  Score=54.17  Aligned_cols=76  Identities=21%  Similarity=0.337  Sum_probs=51.0

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----CCC-eeecCCCchhHHHHHHHHCCCCccEEE
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF----GFD-EAFNYKEEPDLDAALKRYFPEGINIYF  126 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~----g~~-~~i~~~~~~~~~~~i~~~~~~~~d~v~  126 (241)
                      +.+|||+||+|.+|...++.+...|.+|+++++++++.+.+.+.+    +.. ...|..+...+.+.+...   ++|+||
T Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---~~d~vi   85 (357)
T 1rkx_A            9 GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF---QPEIVF   85 (357)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH---CCSEEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhc---CCCEEE
Confidence            568999999999999999999889999999998765443332122    111 123444431233333322   589999


Q ss_pred             eCCC
Q 026217          127 ENVG  130 (241)
Q Consensus       127 d~~g  130 (241)
                      ++++
T Consensus        86 h~A~   89 (357)
T 1rkx_A           86 HMAA   89 (357)
T ss_dssp             ECCS
T ss_pred             ECCC
Confidence            9998

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=97.28  E-value=0.0012  Score=52.62  Aligned_cols=91  Identities=16%  Similarity=0.124  Sum_probs=58.5

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe-eecCCCchhHHHHHHHHCCCCccEEEeCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFENV  129 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~i~~~~~~~~d~v~d~~  129 (241)
                      ++.+|||+||+|.+|..+++.+...|.+|+++++++++       .+... ..|..+...+.+.+.     ++|+|+.++
T Consensus        18 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-------~~~~~~~~Dl~d~~~~~~~~~-----~~d~vih~A   85 (347)
T 4id9_A           18 GSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-------TGGEEVVGSLEDGQALSDAIM-----GVSAVLHLG   85 (347)
T ss_dssp             ---CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-------SCCSEEESCTTCHHHHHHHHT-----TCSEEEECC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-------CCccEEecCcCCHHHHHHHHh-----CCCEEEECC
Confidence            45689999999999999999999999999999987654       12221 234444312322222     599999988


Q ss_pred             Cch-----h-----------HHHHHHhhccC--CEEEEEeee
Q 026217          130 GGK-----M-----------LDAVLLNMRIQ--GRITLCGMI  153 (241)
Q Consensus       130 g~~-----~-----------~~~~~~~l~~~--G~~v~~g~~  153 (241)
                      +..     .           ...+++.+...  ++++.++..
T Consensus        86 ~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~  127 (347)
T 4id9_A           86 AFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSG  127 (347)
T ss_dssp             CCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEG
T ss_pred             cccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCH
Confidence            621     1           12344444433  488888773

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.28  E-value=0.0025  Score=50.19  Aligned_cols=75  Identities=13%  Similarity=0.159  Sum_probs=51.4

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC---HHHHHHHHHHcC----CC-eeecCCCchhHHHHHHHHCCCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGS---KDKVDLLKNKFG----FD-EAFNYKEEPDLDAALKRYFPEG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~---~~~~~~~~~~~g----~~-~~i~~~~~~~~~~~i~~~~~~~  121 (241)
                      .+.+++|+|+ |++|.+++..+...|+ +|+++.|+   .++.+.+.++++    .. .+++..+...+.+.+.     .
T Consensus       147 ~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~-----~  220 (312)
T 3t4e_A          147 RGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALA-----S  220 (312)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH-----H
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhcc-----C
Confidence            5789999996 9999999999999999 89999999   666655543443    21 2333332101123333     3


Q ss_pred             ccEEEeCCCc
Q 026217          122 INIYFENVGG  131 (241)
Q Consensus       122 ~d~v~d~~g~  131 (241)
                      +|+|++|++.
T Consensus       221 ~DiIINaTp~  230 (312)
T 3t4e_A          221 ADILTNGTKV  230 (312)
T ss_dssp             CSEEEECSST
T ss_pred             ceEEEECCcC
Confidence            8999999974

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=97.28  E-value=0.0012  Score=51.62  Aligned_cols=73  Identities=21%  Similarity=0.125  Sum_probs=50.7

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHH--HHHHHHcCCCe-eecCCCchhHHHHHHHHCCCCccEEEe
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKDKV--DLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFE  127 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g-~~v~~~~~~~~~~--~~~~~~~g~~~-~i~~~~~~~~~~~i~~~~~~~~d~v~d  127 (241)
                      ..+|+|+||+|.+|...++.+...| .+|+++++++++.  ..+. ..+... ..|..+...+...+    . ++|.||.
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~-~~~~~~~~~D~~d~~~l~~~~----~-~~d~vi~   78 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELR-LQGAEVVQGDQDDQVIMELAL----N-GAYATFI   78 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHH-HTTCEEEECCTTCHHHHHHHH----T-TCSEEEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHH-HCCCEEEEecCCCHHHHHHHH----h-cCCEEEE
Confidence            4689999999999999998888888 8999999886653  2333 345432 23444431232222    2 5999999


Q ss_pred             CCC
Q 026217          128 NVG  130 (241)
Q Consensus       128 ~~g  130 (241)
                      +++
T Consensus        79 ~a~   81 (299)
T 2wm3_A           79 VTN   81 (299)
T ss_dssp             CCC
T ss_pred             eCC
Confidence            987

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=97.27  E-value=0.0017  Score=50.49  Aligned_cols=64  Identities=9%  Similarity=0.135  Sum_probs=45.1

Q ss_pred             CCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeC
Q 026217           49 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFEN  128 (241)
Q Consensus        49 ~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~  128 (241)
                      -.+..+|||+||+|.+|...++.+...|.+|++++++.               .|..+...+.+.+...   ++|+||++
T Consensus         9 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~---------------~Dl~d~~~~~~~~~~~---~~d~vih~   70 (292)
T 1vl0_A            9 HHHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQD---------------LDITNVLAVNKFFNEK---KPNVVINC   70 (292)
T ss_dssp             ---CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT---------------CCTTCHHHHHHHHHHH---CCSEEEEC
T ss_pred             ccccceEEEECCCChHHHHHHHHHHhCCCeEEeccCcc---------------CCCCCHHHHHHHHHhc---CCCEEEEC
Confidence            34667899999999999999999988899999999751               1233321333333322   58999998


Q ss_pred             CC
Q 026217          129 VG  130 (241)
Q Consensus       129 ~g  130 (241)
                      ++
T Consensus        71 A~   72 (292)
T 1vl0_A           71 AA   72 (292)
T ss_dssp             CC
T ss_pred             Cc
Confidence            87

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=97.27  E-value=0.00048  Score=52.57  Aligned_cols=80  Identities=18%  Similarity=0.247  Sum_probs=49.7

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHH---cCCC-e--eecCCCchhHH---HHHHHHC--
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGS-AGSKDKVDLLKNK---FGFD-E--AFNYKEEPDLD---AALKRYF--  118 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~-~~~~~~~~~~~~~---~g~~-~--~i~~~~~~~~~---~~i~~~~--  118 (241)
                      .+.+++|+||++++|.+.++.+...|++|+++ .+++++.+.+.++   .+.. .  ..|..+..+..   +.+.+..  
T Consensus         6 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (255)
T 3icc_A            6 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN   85 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhcc
Confidence            57899999999999999999999999999886 4554444333222   2321 1  12333321222   2222211  


Q ss_pred             ---CCCccEEEeCCC
Q 026217          119 ---PEGINIYFENVG  130 (241)
Q Consensus       119 ---~~~~d~v~d~~g  130 (241)
                         .+++|++++++|
T Consensus        86 ~~~~~~id~lv~nAg  100 (255)
T 3icc_A           86 RTGSTKFDILINNAG  100 (255)
T ss_dssp             HHSSSCEEEEEECCC
T ss_pred             cccCCcccEEEECCC
Confidence               125999999987

>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*

Probab=97.27  E-value=0.002  Score=46.49  Aligned_cols=98  Identities=16%  Similarity=0.180  Sum_probs=66.4

Q ss_pred             cCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC--eeecCCCchhHHHHHHHHCCCC
Q 026217           47 CSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD--EAFNYKEEPDLDAALKRYFPEG  121 (241)
Q Consensus        47 ~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~--~~i~~~~~~~~~~~i~~~~~~~  121 (241)
                      ..++++++||=.|  .|.|..+..+++. +.+|++++.+++..+.+++.+   |.+  .++. .+   . ..+....++.
T Consensus        18 ~~~~~~~~vLDiG--cG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~-~~---~-~~l~~~~~~~   89 (185)
T 3mti_A           18 EVLDDESIVVDAT--MGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGIENTELIL-DG---H-ENLDHYVREP   89 (185)
T ss_dssp             TTCCTTCEEEESC--CTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEE-SC---G-GGGGGTCCSC
T ss_pred             HhCCCCCEEEEEc--CCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe-Cc---H-HHHHhhccCC
Confidence            4678999999988  4558888888887 889999999999888777432   332  2222 11   1 1122233447


Q ss_pred             ccEEEeCCCc----------------hhHHHHHHhhccCCEEEEEee
Q 026217          122 INIYFENVGG----------------KMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       122 ~d~v~d~~g~----------------~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      ||+|+-..+-                ..+..+.+.|+++|+++.+..
T Consensus        90 fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~  136 (185)
T 3mti_A           90 IRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIY  136 (185)
T ss_dssp             EEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             cCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEe
Confidence            9998765321                234778889999999988754

>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*

Probab=97.27  E-value=0.00054  Score=53.27  Aligned_cols=102  Identities=11%  Similarity=0.042  Sum_probs=69.3

Q ss_pred             HHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCCeeecCCCchhHHHHHHHHCC
Q 026217           43 FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEPDLDAALKRYFP  119 (241)
Q Consensus        43 l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~~~i~~~~~~~~~~~i~~~~~  119 (241)
                      +.+...+.++.+||-.|  .|.|..+..+++..|.+|++++.+++..+.+++.+   |...-+..... ++    .+.. 
T Consensus        56 ~~~~~~~~~~~~vLDiG--cG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~-d~----~~~~-  127 (287)
T 1kpg_A           56 ALGKLGLQPGMTLLDVG--CGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLA-GW----EQFD-  127 (287)
T ss_dssp             HHTTTTCCTTCEEEEET--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEES-CG----GGCC-
T ss_pred             HHHHcCCCCcCEEEEEC--CcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEEC-Ch----hhCC-
Confidence            33445688999999999  44588888999888999999999999888887432   32111111111 22    1121 


Q ss_pred             CCccEEEeCC-----C----chhHHHHHHhhccCCEEEEEee
Q 026217          120 EGINIYFENV-----G----GKMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       120 ~~~d~v~d~~-----g----~~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      +.+|+|+..-     +    ...+..+.++|+|+|+++....
T Consensus       128 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  169 (287)
T 1kpg_A          128 EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTI  169 (287)
T ss_dssp             CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred             CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence            5799998642     2    1357788889999999987654

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=97.27  E-value=0.0011  Score=55.17  Aligned_cols=90  Identities=19%  Similarity=0.156  Sum_probs=67.7

Q ss_pred             CCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeC
Q 026217           49 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFEN  128 (241)
Q Consensus        49 ~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~  128 (241)
                      --.|.+|+|.|. |.+|..+++.++.+|++|+++++++.+...+. ..|.. +.      ++.+.+.     ..|+|+.+
T Consensus       254 ~l~GktVgIIG~-G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~-~~g~~-~~------~l~ell~-----~aDiVi~~  319 (479)
T 1v8b_A          254 LISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPICAIQAV-MEGFN-VV------TLDEIVD-----KGDFFITC  319 (479)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH-TTTCE-EC------CHHHHTT-----TCSEEEEC
T ss_pred             ccCCCEEEEEee-CHHHHHHHHHHHhCcCEEEEEeCChhhHHHHH-HcCCE-ec------CHHHHHh-----cCCEEEEC
Confidence            357889999995 99999999999999999999999887654444 55552 21      3333332     49999998


Q ss_pred             CCchh-H-HHHHHhhccCCEEEEEee
Q 026217          129 VGGKM-L-DAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       129 ~g~~~-~-~~~~~~l~~~G~~v~~g~  152 (241)
                      ++... + ...+..|+++..++.+|.
T Consensus       320 ~~t~~lI~~~~l~~MK~gailiNvgr  345 (479)
T 1v8b_A          320 TGNVDVIKLEHLLKMKNNAVVGNIGH  345 (479)
T ss_dssp             CSSSSSBCHHHHTTCCTTCEEEECSS
T ss_pred             CChhhhcCHHHHhhcCCCcEEEEeCC
Confidence            87532 2 467788999999998875

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=97.26  E-value=0.0011  Score=52.08  Aligned_cols=91  Identities=13%  Similarity=0.115  Sum_probs=59.4

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe-eecCCCchhHHHHHHHHCCCCccEEEeCCCc
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFENVGG  131 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~  131 (241)
                      .+|||+||+|.+|...++.+...|.+|+++++++...+ +.   +... ..|.    . .+.+.+... ++|+||++++.
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~---~~~~~~~Dl----~-~~~~~~~~~-~~d~Vih~a~~   72 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-IN---DYEYRVSDY----T-LEDLINQLN-DVDAVVHLAAT   72 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC---------CCEEEECCC----C-HHHHHHHTT-TCSEEEECCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-CC---ceEEEEccc----c-HHHHHHhhc-CCCEEEEcccc
Confidence            57999999999999999999999999999999855444 43   3322 2233    3 344444443 69999999873


Q ss_pred             h--------------hHHHHHHhhccC--CEEEEEeee
Q 026217          132 K--------------MLDAVLLNMRIQ--GRITLCGMI  153 (241)
Q Consensus       132 ~--------------~~~~~~~~l~~~--G~~v~~g~~  153 (241)
                      .              ....+++.+...  .+++.++..
T Consensus        73 ~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~  110 (311)
T 3m2p_A           73 RGSQGKISEFHDNEILTQNLYDACYENNISNIVYASTI  110 (311)
T ss_dssp             CCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEG
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccH
Confidence            1              123444444443  468887763

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=97.26  E-value=0.0028  Score=52.92  Aligned_cols=94  Identities=15%  Similarity=0.161  Sum_probs=61.4

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHcCCCe-eecCCCchhHHHHHHHHCCCCccEEEeC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFEN  128 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~-g~~v~~~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~i~~~~~~~~d~v~d~  128 (241)
                      ++.+|+|+|+ |++|.+++..+... +.+|+++++++++.+.+.+..+... .+|..+..++.+.+.     ++|+|++|
T Consensus        22 ~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~-----~~DvVIn~   95 (467)
T 2axq_A           22 MGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLA-----DNDVVISL   95 (467)
T ss_dssp             -CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHH-----TSSEEEEC
T ss_pred             CCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHc-----CCCEEEEC
Confidence            3568999997 99999998888877 6799999999888776653334321 234433212333332     59999999


Q ss_pred             CCchh-HHHHHHhhccCCEEEEE
Q 026217          129 VGGKM-LDAVLLNMRIQGRITLC  150 (241)
Q Consensus       129 ~g~~~-~~~~~~~l~~~G~~v~~  150 (241)
                      ++... ......++..+-.++..
T Consensus        96 tp~~~~~~v~~a~l~~g~~vvd~  118 (467)
T 2axq_A           96 IPYTFHPNVVKSAIRTKTDVVTS  118 (467)
T ss_dssp             SCGGGHHHHHHHHHHHTCEEEEC
T ss_pred             CchhhhHHHHHHHHhcCCEEEEe
Confidence            99642 22334455666555553

>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}

Probab=97.25  E-value=0.0016  Score=47.53  Aligned_cols=102  Identities=18%  Similarity=0.190  Sum_probs=67.2

Q ss_pred             cCCCCCcEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHH---cCCCeeecCCCchhHHHHHHHHCCCC
Q 026217           47 CSPKQGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRYFPEG  121 (241)
Q Consensus        47 ~~~~~~~~vlI~ga~g~~G~~avqla~~~g--~~v~~~~~~~~~~~~~~~~---~g~~~~i~~~~~~~~~~~i~~~~~~~  121 (241)
                      ..++++++||-.|  .|.|..+..+++..+  .+|++++.+++..+.+++.   .|...-+..... ++. .+....++.
T Consensus        18 ~~~~~~~~vLDlG--cG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~~-~~~~~~~~~   93 (197)
T 3eey_A           18 MFVKEGDTVVDAT--CGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKD-GHQ-NMDKYIDCP   93 (197)
T ss_dssp             HHCCTTCEEEESC--CTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECS-CGG-GGGGTCCSC
T ss_pred             hcCCCCCEEEEcC--CCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEEC-CHH-HHhhhccCC
Confidence            4678999999998  344888888998864  5999999999988877743   233111111111 211 111123347


Q ss_pred             ccEEEeCCCc----------------hhHHHHHHhhccCCEEEEEee
Q 026217          122 INIYFENVGG----------------KMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       122 ~d~v~d~~g~----------------~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      +|+|+...+-                ..+..+.+.|+++|+++....
T Consensus        94 fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~  140 (197)
T 3eey_A           94 VKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIY  140 (197)
T ss_dssp             EEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             ceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEc
Confidence            9999865421                367888899999999988754

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=97.25  E-value=0.0015  Score=55.39  Aligned_cols=82  Identities=11%  Similarity=0.005  Sum_probs=53.4

Q ss_pred             CCCCCcEEEEEcCCchHHHHHHHHHHHcCCE-EEEE-eCCH-------------HH----HHHHHHHcCCCe---eecCC
Q 026217           48 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-VVGS-AGSK-------------DK----VDLLKNKFGFDE---AFNYK  105 (241)
Q Consensus        48 ~~~~~~~vlI~ga~g~~G~~avqla~~~g~~-v~~~-~~~~-------------~~----~~~~~~~~g~~~---~i~~~  105 (241)
                      .++++.++||+||+|++|...++.+...|++ |+.+ .++.             ++    .+.++ ..|...   ..|..
T Consensus       247 ~~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~-~~g~~v~~~~~Dvt  325 (525)
T 3qp9_A          247 WWQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELA-DLGATATVVTCDLT  325 (525)
T ss_dssp             SSCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHH-HHTCEEEEEECCTT
T ss_pred             eecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHH-hcCCEEEEEECCCC
Confidence            3567899999999999999988888888985 6666 6662             22    23333 446532   23444


Q ss_pred             CchhHHHHHHHHCC-CCccEEEeCCC
Q 026217          106 EEPDLDAALKRYFP-EGINIYFENVG  130 (241)
Q Consensus       106 ~~~~~~~~i~~~~~-~~~d~v~d~~g  130 (241)
                      +...+...+..... +++|.||+++|
T Consensus       326 d~~~v~~~~~~i~~~g~id~vVh~AG  351 (525)
T 3qp9_A          326 DAEAAARLLAGVSDAHPLSAVLHLPP  351 (525)
T ss_dssp             SHHHHHHHHHTSCTTSCEEEEEECCC
T ss_pred             CHHHHHHHHHHHHhcCCCcEEEECCc
Confidence            44234444444332 37999999998

>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13

Probab=97.25  E-value=0.0017  Score=50.17  Aligned_cols=104  Identities=17%  Similarity=0.157  Sum_probs=71.2

Q ss_pred             HHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHc----C--CCeeecCCCchhHHHHH
Q 026217           43 FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKNKF----G--FDEAFNYKEEPDLDAAL  114 (241)
Q Consensus        43 l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~--g~~v~~~~~~~~~~~~~~~~~----g--~~~~i~~~~~~~~~~~i  114 (241)
                      +.....+.++++||..|+ | .|..+..+++..  +.+|++++.+++..+.+++.+    |  .+.+ ..... ++.+. 
T Consensus        91 i~~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v-~~~~~-d~~~~-  165 (280)
T 1i9g_A           91 IVHEGDIFPGARVLEAGA-G-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNW-RLVVS-DLADS-  165 (280)
T ss_dssp             HHHHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTE-EEECS-CGGGC-
T ss_pred             HHHHcCCCCCCEEEEEcc-c-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcE-EEEEC-chHhc-
Confidence            334567899999999993 4 888899999876  469999999999888887433    4  2211 11111 11111 


Q ss_pred             HHHCCCCccEEEeCCCc--hhHHHHHHhhccCCEEEEEee
Q 026217          115 KRYFPEGINIYFENVGG--KMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       115 ~~~~~~~~d~v~d~~g~--~~~~~~~~~l~~~G~~v~~g~  152 (241)
                       ...++.+|+|+.....  ..+..+.+.|+++|+++....
T Consensus       166 -~~~~~~~D~v~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  204 (280)
T 1i9g_A          166 -ELPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYVA  204 (280)
T ss_dssp             -CCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred             -CCCCCceeEEEECCcCHHHHHHHHHHhCCCCCEEEEEeC
Confidence             0112379999876553  578889999999999988653

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=97.24  E-value=0.0004  Score=55.32  Aligned_cols=96  Identities=16%  Similarity=0.115  Sum_probs=60.2

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe-eecCCCchhHHHHHHHHCCCCccEEEeCCCc
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFENVGG  131 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~  131 (241)
                      -+|||+||+|.+|...++.+...|.+|+++++++++.+.+. ..+... ..|..+.    +.+.+... ++|+||++++.
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-~~~~~~~~~Dl~d~----~~~~~~~~-~~d~vih~a~~   87 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLA-YLEPECRVAEMLDH----AGLERALR-GLDGVIFSAGY   87 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGG-GGCCEEEECCTTCH----HHHHHHTT-TCSEEEEC---
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhc-cCCeEEEEecCCCH----HHHHHHHc-CCCEEEECCcc
Confidence            37999999999999999999899999999998876544333 323322 2244333    23333332 59999999873


Q ss_pred             hh----------------HHHHHHhhcc-C-CEEEEEeeec
Q 026217          132 KM----------------LDAVLLNMRI-Q-GRITLCGMIS  154 (241)
Q Consensus       132 ~~----------------~~~~~~~l~~-~-G~~v~~g~~~  154 (241)
                      ..                ...+++.+.+ + ++++.++...
T Consensus        88 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~  128 (342)
T 2x4g_A           88 YPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAY  128 (342)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGG
T ss_pred             CcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHH
Confidence            11                1233444433 3 6899887654

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=97.24  E-value=0.0014  Score=51.34  Aligned_cols=92  Identities=16%  Similarity=0.217  Sum_probs=58.6

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC------HHHHHHHHH--HcCCCe-eecCCCchhHHHHHHHHCCCCc
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS------KDKVDLLKN--KFGFDE-AFNYKEEPDLDAALKRYFPEGI  122 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~------~~~~~~~~~--~~g~~~-~i~~~~~~~~~~~i~~~~~~~~  122 (241)
                      ..+|+|+||+|.+|...++.+...|.+|++++|+      +++.+.+++  ..|+.. ..|..+...+.+.++     ++
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~-----~~   78 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK-----NV   78 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH-----TC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHc-----CC
Confidence            3579999999999999999999999999999986      334333330  234432 235544313333332     49


Q ss_pred             cEEEeCCCch---hHHHHHHhhcc-C--CEEE
Q 026217          123 NIYFENVGGK---MLDAVLLNMRI-Q--GRIT  148 (241)
Q Consensus       123 d~v~d~~g~~---~~~~~~~~l~~-~--G~~v  148 (241)
                      |+||.+++..   ....+++.+.. +  .+++
T Consensus        79 d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v  110 (308)
T 1qyc_A           79 DVVISTVGSLQIESQVNIIKAIKEVGTVKRFF  110 (308)
T ss_dssp             SEEEECCCGGGSGGGHHHHHHHHHHCCCSEEE
T ss_pred             CEEEECCcchhhhhHHHHHHHHHhcCCCceEe
Confidence            9999999842   23444454443 2  4665

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=97.23  E-value=0.0015  Score=52.20  Aligned_cols=91  Identities=23%  Similarity=0.205  Sum_probs=59.3

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH----HHHHHHHH--HcCCCe-eecCCCchhHHHHHHHHCCCCccE
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK----DKVDLLKN--KFGFDE-AFNYKEEPDLDAALKRYFPEGINI  124 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~----~~~~~~~~--~~g~~~-~i~~~~~~~~~~~i~~~~~~~~d~  124 (241)
                      ..+|+|+||+|.+|...++.+...|.+|++++|++    ++.+.+.+  ..+... ..|..+...+.+.+.+   .++|+
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~---~~~d~   86 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKE---HEIDI   86 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHH---TTCCE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhh---CCCCE
Confidence            35799999999999999999999999999999876    44443330  234432 2344443234444432   26999


Q ss_pred             EEeCCCc---hhHHHHHHhhccCC
Q 026217          125 YFENVGG---KMLDAVLLNMRIQG  145 (241)
Q Consensus       125 v~d~~g~---~~~~~~~~~l~~~G  145 (241)
                      ||.+++.   .....+++.++..|
T Consensus        87 Vi~~a~~~n~~~~~~l~~aa~~~g  110 (346)
T 3i6i_A           87 VVSTVGGESILDQIALVKAMKAVG  110 (346)
T ss_dssp             EEECCCGGGGGGHHHHHHHHHHHC
T ss_pred             EEECCchhhHHHHHHHHHHHHHcC
Confidence            9999984   23345555555444

>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=97.22  E-value=0.0003  Score=53.24  Aligned_cols=96  Identities=6%  Similarity=-0.022  Sum_probs=66.8

Q ss_pred             CCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC-----eeecCCCchhHHHHHHHHCCCCcc
Q 026217           49 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-----EAFNYKEEPDLDAALKRYFPEGIN  123 (241)
Q Consensus        49 ~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~-----~~i~~~~~~~~~~~i~~~~~~~~d  123 (241)
                      ..+|.+||-+|  .|+|..+..+++..+.+|++++.+++-.+.++ +....     .++.   . +.........++.||
T Consensus        58 ~~~G~rVLdiG--~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~-~~~~~~~~~~~~~~---~-~a~~~~~~~~~~~FD  130 (236)
T 3orh_A           58 SSKGGRVLEVG--FGMAIAASKVQEAPIDEHWIIECNDGVFQRLR-DWAPRQTHKVIPLK---G-LWEDVAPTLPDGHFD  130 (236)
T ss_dssp             TTTCEEEEEEC--CTTSHHHHHHTTSCEEEEEEEECCHHHHHHHH-HHGGGCSSEEEEEE---S-CHHHHGGGSCTTCEE
T ss_pred             ccCCCeEEEEC--CCccHHHHHHHHhCCcEEEEEeCCHHHHHHHH-HHHhhCCCceEEEe---e-hHHhhcccccccCCc
Confidence            46899999999  55788888888877779999999999999988 43321     1221   1 333334444445899


Q ss_pred             EE-EeCCCc-----------hhHHHHHHhhccCCEEEEEe
Q 026217          124 IY-FENVGG-----------KMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       124 ~v-~d~~g~-----------~~~~~~~~~l~~~G~~v~~g  151 (241)
                      .+ +|+...           ..+..+.++|+|||+++.+.
T Consensus       131 ~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~  170 (236)
T 3orh_A          131 GILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN  170 (236)
T ss_dssp             EEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred             eEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence            87 565431           13566888999999998753

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.22  E-value=0.0087  Score=41.77  Aligned_cols=94  Identities=11%  Similarity=0.031  Sum_probs=58.5

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHHc--CCCeee-cCCCchhHHHHHHHHCCCCccEEEe
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS-KDKVDLLKNKF--GFDEAF-NYKEEPDLDAALKRYFPEGINIYFE  127 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~-~~~~~~~~~~~--g~~~~i-~~~~~~~~~~~i~~~~~~~~d~v~d  127 (241)
                      ..+++|.|+ |.+|...++.+...|.+|++++++ +++.+.+.+.+  |...+. |..+.    +.+.+..-.++|.|+-
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~----~~l~~a~i~~ad~vi~   77 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDS----SVLKKAGIDRCRAILA   77 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSH----HHHHHHTTTTCSEEEE
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCH----HHHHHcChhhCCEEEE
Confidence            467899996 999999999999999999999986 45555554233  333221 22222    2333332236999999


Q ss_pred             CCCchhHH----HHHHhhccCCEEEEE
Q 026217          128 NVGGKMLD----AVLLNMRIQGRITLC  150 (241)
Q Consensus       128 ~~g~~~~~----~~~~~l~~~G~~v~~  150 (241)
                      +++.+...    ...+.+.+..+++..
T Consensus        78 ~~~~d~~n~~~~~~a~~~~~~~~ii~~  104 (153)
T 1id1_A           78 LSDNDADNAFVVLSAKDMSSDVKTVLA  104 (153)
T ss_dssp             CSSCHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred             ecCChHHHHHHHHHHHHHCCCCEEEEE
Confidence            99864322    233334344566553

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=97.22  E-value=0.00044  Score=54.99  Aligned_cols=102  Identities=7%  Similarity=-0.043  Sum_probs=61.8

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC-CC-eeecCCCchhHHHHHHHHCCCCccEEEeC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFG-FD-EAFNYKEEPDLDAALKRYFPEGINIYFEN  128 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g-~~-~~i~~~~~~~~~~~i~~~~~~~~d~v~d~  128 (241)
                      .+.+|||+||+|.+|..+++.+...|.+|+++++++.....+.+.+. .. ...|..+...+.+.+.+.   ++|+||++
T Consensus        19 ~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~---~~D~vih~   95 (330)
T 2pzm_A           19 SHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSF---KPTHVVHS   95 (330)
T ss_dssp             TCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHH---CCSEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhc---CCCEEEEC
Confidence            35689999999999999999988889999999986433221110221 11 123444431333334322   59999999


Q ss_pred             CCchh---------------HHHHHHhhc-c-CCEEEEEeeecc
Q 026217          129 VGGKM---------------LDAVLLNMR-I-QGRITLCGMISQ  155 (241)
Q Consensus       129 ~g~~~---------------~~~~~~~l~-~-~G~~v~~g~~~~  155 (241)
                      +|...               ...+++.+. . .++++.++....
T Consensus        96 A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~  139 (330)
T 2pzm_A           96 AAAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQTALC  139 (330)
T ss_dssp             CCCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEEGGG
T ss_pred             CccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecCHHH
Confidence            97311               122333332 2 368998887543

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=97.21  E-value=0.0018  Score=54.12  Aligned_cols=89  Identities=17%  Similarity=0.167  Sum_probs=67.1

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCC
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV  129 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~  129 (241)
                      -.|.+|+|.|. |.+|..+++.++.+|++|+++++++.+..... ..|.. +.      ++.+.++     ..|+|+.++
T Consensus       275 L~GktVgIIG~-G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~-~~G~~-~~------~l~ell~-----~aDiVi~~~  340 (494)
T 3d64_A          275 IAGKIAVVAGY-GDVGKGCAQSLRGLGATVWVTEIDPICALQAA-MEGYR-VV------TMEYAAD-----KADIFVTAT  340 (494)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSCHHHHHHHH-TTTCE-EC------CHHHHTT-----TCSEEEECS
T ss_pred             cCCCEEEEEcc-CHHHHHHHHHHHHCCCEEEEEeCChHhHHHHH-HcCCE-eC------CHHHHHh-----cCCEEEECC
Confidence            47889999995 99999999999999999999999887654444 44543 21      3333332     499999998


Q ss_pred             Cch-hH-HHHHHhhccCCEEEEEee
Q 026217          130 GGK-ML-DAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       130 g~~-~~-~~~~~~l~~~G~~v~~g~  152 (241)
                      +.. .+ ...+..++++..++.++.
T Consensus       341 ~t~~lI~~~~l~~MK~gAilINvgr  365 (494)
T 3d64_A          341 GNYHVINHDHMKAMRHNAIVCNIGH  365 (494)
T ss_dssp             SSSCSBCHHHHHHCCTTEEEEECSS
T ss_pred             CcccccCHHHHhhCCCCcEEEEcCC
Confidence            753 22 467788999998888876

>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}

Probab=97.21  E-value=0.001  Score=50.11  Aligned_cols=99  Identities=13%  Similarity=0.150  Sum_probs=67.6

Q ss_pred             HhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHcCC-C--eee--cCCCchhHHHHHHHH
Q 026217           45 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDKVDLLKNKFGF-D--EAF--NYKEEPDLDAALKRY  117 (241)
Q Consensus        45 ~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~--~v~~~~~~~~~~~~~~~~~g~-~--~~i--~~~~~~~~~~~i~~~  117 (241)
                      ....++||++||=.|  .+.|..+..+|+..|-  +|++++.+++..+.+++.... .  ..+  +....    ... ..
T Consensus        71 ~~l~ikpG~~VldlG--~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p----~~~-~~  143 (233)
T 4df3_A           71 IELPVKEGDRILYLG--IASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFP----EKY-RH  143 (233)
T ss_dssp             SCCCCCTTCEEEEET--CTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCG----GGG-TT
T ss_pred             hhcCCCCCCEEEEec--CcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCc----ccc-cc
Confidence            335799999999999  5678889999999875  899999999988888733321 1  111  11211    011 11


Q ss_pred             CCCCccEEEeCCCc-----hhHHHHHHhhccCCEEEEE
Q 026217          118 FPEGINIYFENVGG-----KMLDAVLLNMRIQGRITLC  150 (241)
Q Consensus       118 ~~~~~d~v~d~~g~-----~~~~~~~~~l~~~G~~v~~  150 (241)
                      ..+.+|+||....-     ..+..+.+.|+++|++++.
T Consensus       144 ~~~~vDvVf~d~~~~~~~~~~l~~~~r~LKpGG~lvI~  181 (233)
T 4df3_A          144 LVEGVDGLYADVAQPEQAAIVVRNARFFLRDGGYMLMA  181 (233)
T ss_dssp             TCCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ccceEEEEEEeccCChhHHHHHHHHHHhccCCCEEEEE
Confidence            12379988865542     2566778899999999875

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=97.20  E-value=0.003  Score=50.60  Aligned_cols=48  Identities=23%  Similarity=0.318  Sum_probs=40.4

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD   99 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~   99 (241)
                      -+|.+|.|.| .|.+|+.+++.++.+|++|++.+.++++.+..+ ++|+.
T Consensus       173 L~GktV~I~G-~GnVG~~~A~~l~~~GakVvvsD~~~~~~~~a~-~~ga~  220 (355)
T 1c1d_A          173 LDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHAV-ALGHT  220 (355)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCE
T ss_pred             CCCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHH-hcCCE
Confidence            4789999999 599999999999999999998887776655555 77764

>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*

Probab=97.20  E-value=0.0024  Score=50.32  Aligned_cols=102  Identities=11%  Similarity=0.075  Sum_probs=69.8

Q ss_pred             HhcC-CCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCC---eeecCCCchhHHHHHHHH
Q 026217           45 EVCS-PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFD---EAFNYKEEPDLDAALKRY  117 (241)
Q Consensus        45 ~~~~-~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~---~g~~---~~i~~~~~~~~~~~i~~~  117 (241)
                      +... ++++++||-.|  .|.|..+..+++..|++|++++.+++..+.+++.   .|..   .++..+-. ++     ..
T Consensus       110 ~~l~~~~~~~~vLDiG--cG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~-----~~  181 (312)
T 3vc1_A          110 DHLGQAGPDDTLVDAG--CGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNML-DT-----PF  181 (312)
T ss_dssp             TTSCCCCTTCEEEEES--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT-SC-----CC
T ss_pred             HHhccCCCCCEEEEec--CCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChh-cC-----CC
Confidence            3344 78999999998  4568888888888899999999999988877733   3332   11111111 11     01


Q ss_pred             CCCCccEEEeCCC------chhHHHHHHhhccCCEEEEEeeec
Q 026217          118 FPEGINIYFENVG------GKMLDAVLLNMRIQGRITLCGMIS  154 (241)
Q Consensus       118 ~~~~~d~v~d~~g------~~~~~~~~~~l~~~G~~v~~g~~~  154 (241)
                      .++.+|+|+..-.      ...+..+.++|+++|+++......
T Consensus       182 ~~~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~~~~  224 (312)
T 3vc1_A          182 DKGAVTASWNNESTMYVDLHDLFSEHSRFLKVGGRYVTITGCW  224 (312)
T ss_dssp             CTTCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred             CCCCEeEEEECCchhhCCHHHHHHHHHHHcCCCcEEEEEEccc
Confidence            2347999986432      246788899999999999876543

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=97.19  E-value=0.0031  Score=50.65  Aligned_cols=97  Identities=18%  Similarity=0.163  Sum_probs=61.1

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHH--HHHHHHc-CCCe-eec-CCCchhHHHHHHHHCCCCccEEE
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKV--DLLKNKF-GFDE-AFN-YKEEPDLDAALKRYFPEGINIYF  126 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~--~~~~~~~-g~~~-~i~-~~~~~~~~~~i~~~~~~~~d~v~  126 (241)
                      +.+|+|+||+|.+|...++.+...|.+|+++++++++.  +.+. .. +... ..| ..+..++...+     .++|.||
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~-~~~~v~~v~~D~l~d~~~l~~~~-----~~~d~Vi   78 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQ-AIPNVTLFQGPLLNNVPLMDTLF-----EGAHLAF   78 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHH-TSTTEEEEESCCTTCHHHHHHHH-----TTCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHh-hcCCcEEEECCccCCHHHHHHHH-----hcCCEEE
Confidence            45799999999999999998888899999999876654  3333 22 2221 234 44431233222     2489999


Q ss_pred             eCCCch------hHHHHHHhhcc-C--CEEEEEeeec
Q 026217          127 ENVGGK------MLDAVLLNMRI-Q--GRITLCGMIS  154 (241)
Q Consensus       127 d~~g~~------~~~~~~~~l~~-~--G~~v~~g~~~  154 (241)
                      .+.+..      ....+++.+.. +  ++++.++...
T Consensus        79 ~~a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~  115 (352)
T 1xgk_A           79 INTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPD  115 (352)
T ss_dssp             ECCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECCC
T ss_pred             EcCCCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCcc
Confidence            776531      12344444443 3  5888887653

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=97.19  E-value=0.0017  Score=51.71  Aligned_cols=87  Identities=15%  Similarity=0.208  Sum_probs=64.0

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      .|.+|.|+| .|.+|...++.++..|.+|++.+++.++ +.+. ++|+...       ++.+.+.     ..|+|+.++.
T Consensus       164 ~g~tvgIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~~-~~g~~~~-------~l~ell~-----~aDvV~l~~P  228 (335)
T 2g76_A          164 NGKTLGILG-LGRIGREVATRMQSFGMKTIGYDPIISP-EVSA-SFGVQQL-------PLEEIWP-----LCDFITVHTP  228 (335)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSSCH-HHHH-HTTCEEC-------CHHHHGG-----GCSEEEECCC
T ss_pred             CcCEEEEEe-ECHHHHHHHHHHHHCCCEEEEECCCcch-hhhh-hcCceeC-------CHHHHHh-----cCCEEEEecC
Confidence            577999999 5999999999999999999999987655 3555 6776421       3333332     4899998876


Q ss_pred             c-h----hH-HHHHHhhccCCEEEEEee
Q 026217          131 G-K----ML-DAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       131 ~-~----~~-~~~~~~l~~~G~~v~~g~  152 (241)
                      . +    .+ ...+..+++++.++.++.
T Consensus       229 ~t~~t~~li~~~~l~~mk~gailIN~ar  256 (335)
T 2g76_A          229 LLPSTTGLLNDNTFAQCKKGVRVVNCAR  256 (335)
T ss_dssp             CCTTTTTSBCHHHHTTSCTTEEEEECSC
T ss_pred             CCHHHHHhhCHHHHhhCCCCcEEEECCC
Confidence            3 1    12 467778888888888765

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=97.18  E-value=0.0015  Score=50.64  Aligned_cols=83  Identities=7%  Similarity=0.071  Sum_probs=55.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCchh
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKM  133 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~  133 (241)
                      +|||+||+|.+|...++.+...|.+|+++++.         .      .|..+...+.+.+.+.   ++|+|+++++...
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------~------~D~~d~~~~~~~~~~~---~~d~vi~~a~~~~   68 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK---------L------LDITNISQVQQVVQEI---RPHIIIHCAAYTK   68 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT---------T------SCTTCHHHHHHHHHHH---CCSEEEECCCCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc---------c------cCCCCHHHHHHHHHhc---CCCEEEECCcccC
Confidence            79999999999999999988889999999972         1      1233321333333322   5899999887311


Q ss_pred             ------------------HHHHHHhhcc-CCEEEEEeeec
Q 026217          134 ------------------LDAVLLNMRI-QGRITLCGMIS  154 (241)
Q Consensus       134 ------------------~~~~~~~l~~-~G~~v~~g~~~  154 (241)
                                        ...+++.+.. +.+++.++...
T Consensus        69 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~SS~~  108 (287)
T 3sc6_A           69 VDQAEKERDLAYVINAIGARNVAVASQLVGAKLVYISTDY  108 (287)
T ss_dssp             HHHHTTCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGG
T ss_pred             hHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchhh
Confidence                              1234444433 56888887643

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=97.18  E-value=0.002  Score=49.69  Aligned_cols=94  Identities=18%  Similarity=0.125  Sum_probs=63.3

Q ss_pred             CchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHH
Q 026217           33 GMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDA  112 (241)
Q Consensus        33 ~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~  112 (241)
                      ||....+...+.+..---.|.+++|.|+++.+|..+.+++...|++|++..+.                    .. ++.+
T Consensus       142 PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~--------------------t~-~L~~  200 (285)
T 3l07_A          142 SCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRF--------------------TT-DLKS  200 (285)
T ss_dssp             CHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT--------------------CS-SHHH
T ss_pred             CCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC--------------------ch-hHHH
Confidence            33334444444332223478999999986779999999999999998777532                    11 4444


Q ss_pred             HHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeee
Q 026217          113 ALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI  153 (241)
Q Consensus       113 ~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~  153 (241)
                      .++     .+|+|+.++|...+ --.+.++++..++.+|..
T Consensus       201 ~~~-----~ADIVI~Avg~p~~-I~~~~vk~GavVIDvgi~  235 (285)
T 3l07_A          201 HTT-----KADILIVAVGKPNF-ITADMVKEGAVVIDVGIN  235 (285)
T ss_dssp             HHT-----TCSEEEECCCCTTC-BCGGGSCTTCEEEECCCE
T ss_pred             hcc-----cCCEEEECCCCCCC-CCHHHcCCCcEEEEeccc
Confidence            444     38999999996432 123457888888888764

>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}

Probab=97.17  E-value=0.001  Score=48.90  Aligned_cols=93  Identities=14%  Similarity=0.160  Sum_probs=61.8

Q ss_pred             CCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH---cCCC--eeecCCCchhHHHHHHHHCCCCc
Q 026217           49 PKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNK---FGFD--EAFNYKEEPDLDAALKRYFPEGI  122 (241)
Q Consensus        49 ~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~---~g~~--~~i~~~~~~~~~~~i~~~~~~~~  122 (241)
                      +.++.+||-.|. |. |..+..+++ .+. +|++++.+++..+.+++.   .+..  .++..    ++.    +...+.+
T Consensus        58 ~~~~~~vLDiG~-G~-G~~~~~l~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~----d~~----~~~~~~f  126 (205)
T 3grz_A           58 MVKPLTVADVGT-GS-GILAIAAHK-LGAKSVLATDISDESMTAAEENAALNGIYDIALQKT----SLL----ADVDGKF  126 (205)
T ss_dssp             CSSCCEEEEETC-TT-SHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEES----STT----TTCCSCE
T ss_pred             ccCCCEEEEECC-CC-CHHHHHHHH-CCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEec----ccc----ccCCCCc
Confidence            678899999993 43 777777776 455 999999999988888743   2332  12221    111    1123479


Q ss_pred             cEEEeCCCch----hHHHHHHhhccCCEEEEEee
Q 026217          123 NIYFENVGGK----MLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       123 d~v~d~~g~~----~~~~~~~~l~~~G~~v~~g~  152 (241)
                      |+|+....-.    .+..+.+.|+++|+++..+.
T Consensus       127 D~i~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  160 (205)
T 3grz_A          127 DLIVANILAEILLDLIPQLDSHLNEDGQVIFSGI  160 (205)
T ss_dssp             EEEEEESCHHHHHHHGGGSGGGEEEEEEEEEEEE
T ss_pred             eEEEECCcHHHHHHHHHHHHHhcCCCCEEEEEec
Confidence            9998765533    35566678889999988654

>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21

Probab=97.16  E-value=0.00076  Score=51.40  Aligned_cols=101  Identities=12%  Similarity=0.057  Sum_probs=68.8

Q ss_pred             HHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCC---eeecCCCchhHHHHHHH
Q 026217           43 FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFD---EAFNYKEEPDLDAALKR  116 (241)
Q Consensus        43 l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~---~g~~---~~i~~~~~~~~~~~i~~  116 (241)
                      +.....+.++.+||-.|  .|.|..+..+++..|.+|++++.+++..+.+++.   .|..   .++..+.. ++.     
T Consensus        28 l~~~~~~~~~~~VLDiG--cG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~-~~~-----   99 (256)
T 1nkv_A           28 LGRVLRMKPGTRILDLG--SGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAA-GYV-----   99 (256)
T ss_dssp             HHHHTCCCTTCEEEEET--CTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCT-TCC-----
T ss_pred             HHHhcCCCCCCEEEEEC--CCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChH-hCC-----
Confidence            33556788999999999  3448888999998899999999999888777633   2432   12111111 110     


Q ss_pred             HCCCCccEEEeCCC-------chhHHHHHHhhccCCEEEEEee
Q 026217          117 YFPEGINIYFENVG-------GKMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       117 ~~~~~~d~v~d~~g-------~~~~~~~~~~l~~~G~~v~~g~  152 (241)
                       .++.||+|+....       ...+..+.++|+++|+++....
T Consensus       100 -~~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~  141 (256)
T 1nkv_A          100 -ANEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEP  141 (256)
T ss_dssp             -CSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEE
T ss_pred             -cCCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecC
Confidence             1347999985322       1357788889999999987643

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=97.15  E-value=0.00032  Score=55.34  Aligned_cols=36  Identities=11%  Similarity=0.124  Sum_probs=32.7

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD   87 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~   87 (241)
                      +.+|||+||+|.+|..+++.+...|.+|+++++++.
T Consensus         7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   42 (321)
T 3vps_A            7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV   42 (321)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred             CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence            578999999999999999999999999999998754

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=97.15  E-value=0.0058  Score=50.10  Aligned_cols=93  Identities=14%  Similarity=0.080  Sum_probs=63.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHcC------CC-eeecCCCchhHHHHHHHHCCCCcc
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVG---CYVVGSAGSKDKVDLLKNKFG------FD-EAFNYKEEPDLDAALKRYFPEGIN  123 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g---~~v~~~~~~~~~~~~~~~~~g------~~-~~i~~~~~~~~~~~i~~~~~~~~d  123 (241)
                      +|+|+|| |++|..+++.+...|   .+|++.+++.++.+.+.++++      .. ..+|..+..++.+.+.+.   ++|
T Consensus         3 kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~---~~D   78 (405)
T 4ina_A            3 KVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV---KPQ   78 (405)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH---CCS
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh---CCC
Confidence            6899998 999999999888887   489999999988776664543      21 123444431344444432   589


Q ss_pred             EEEeCCCc-hhHHHHHHhhccCCEEEEE
Q 026217          124 IYFENVGG-KMLDAVLLNMRIQGRITLC  150 (241)
Q Consensus       124 ~v~d~~g~-~~~~~~~~~l~~~G~~v~~  150 (241)
                      +|++|++. .....+..++..+-.++.+
T Consensus        79 vVin~ag~~~~~~v~~a~l~~g~~vvD~  106 (405)
T 4ina_A           79 IVLNIALPYQDLTIMEACLRTGVPYLDT  106 (405)
T ss_dssp             EEEECSCGGGHHHHHHHHHHHTCCEEES
T ss_pred             EEEECCCcccChHHHHHHHHhCCCEEEe
Confidence            99999985 3444455566666666654

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=97.14  E-value=0.0012  Score=52.62  Aligned_cols=76  Identities=17%  Similarity=0.216  Sum_probs=49.4

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH----------HHHHHHHHHcCC--C-eeecCCCchhHHHHHHHHC
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK----------DKVDLLKNKFGF--D-EAFNYKEEPDLDAALKRYF  118 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~----------~~~~~~~~~~g~--~-~~i~~~~~~~~~~~i~~~~  118 (241)
                      +.+|||+||+|.+|..+++.+...|.+|++++++.          +..+.+.+..+.  . ...|..+...+.+.+... 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~-   80 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY-   80 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc-
Confidence            35799999999999999998888899999998642          333444311232  2 123444431233333321 


Q ss_pred             CCCccEEEeCCC
Q 026217          119 PEGINIYFENVG  130 (241)
Q Consensus       119 ~~~~d~v~d~~g  130 (241)
                        ++|+||++++
T Consensus        81 --~~d~vih~A~   90 (348)
T 1ek6_A           81 --SFMAVIHFAG   90 (348)
T ss_dssp             --CEEEEEECCS
T ss_pred             --CCCEEEECCC
Confidence              6999999987

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=97.14  E-value=0.0079  Score=49.39  Aligned_cols=94  Identities=17%  Similarity=0.248  Sum_probs=66.4

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeee-cCCCchhHHHHHHHHCCCCccEEEeCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAF-NYKEEPDLDAALKRYFPEGINIYFENV  129 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i-~~~~~~~~~~~i~~~~~~~~d~v~d~~  129 (241)
                      .+.+|+|.|. |.+|+.+++.++..|..|++++.++++.+.++ ..|...++ |..+.    +.++...-..+|.|+-++
T Consensus         3 ~~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~-~~g~~vi~GDat~~----~~L~~agi~~A~~viv~~   76 (413)
T 3l9w_A            3 HGMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLR-KFGMKVFYGDATRM----DLLESAGAAKAEVLINAI   76 (413)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHH-HTTCCCEESCTTCH----HHHHHTTTTTCSEEEECC
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH-hCCCeEEEcCCCCH----HHHHhcCCCccCEEEECC
Confidence            3467999996 99999999999999999999999999999999 88875332 33332    233333223799999999


Q ss_pred             Cch-h---HHHHHHhhccCCEEEEE
Q 026217          130 GGK-M---LDAVLLNMRIQGRITLC  150 (241)
Q Consensus       130 g~~-~---~~~~~~~l~~~G~~v~~  150 (241)
                      +.. .   +....+.+.+..+++.-
T Consensus        77 ~~~~~n~~i~~~ar~~~p~~~Iiar  101 (413)
T 3l9w_A           77 DDPQTNLQLTEMVKEHFPHLQIIAR  101 (413)
T ss_dssp             SSHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred             CChHHHHHHHHHHHHhCCCCeEEEE
Confidence            863 2   23334445566566654

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.14  E-value=0.0029  Score=49.16  Aligned_cols=70  Identities=11%  Similarity=0.098  Sum_probs=52.0

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCC---CeeecCCCchhHHHHHHHHCCCCccEEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGF---DEAFNYKEEPDLDAALKRYFPEGINIYF  126 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~g~---~~~i~~~~~~~~~~~i~~~~~~~~d~v~  126 (241)
                      .+.+++|+|+ |++|.+++..+...|+ +|+++.|++++.+.+.++++.   ..+.+..+   +       . ..+|+|+
T Consensus       125 ~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~---l-------~-~~aDiII  192 (281)
T 3o8q_A          125 KGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQ---L-------K-QSYDVII  192 (281)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG---C-------C-SCEEEEE
T ss_pred             cCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHH---h-------c-CCCCEEE
Confidence            5789999996 9999999998888997 999999999887766646653   12222211   1       1 3699999


Q ss_pred             eCCCch
Q 026217          127 ENVGGK  132 (241)
Q Consensus       127 d~~g~~  132 (241)
                      +|++..
T Consensus       193 naTp~g  198 (281)
T 3o8q_A          193 NSTSAS  198 (281)
T ss_dssp             ECSCCC
T ss_pred             EcCcCC
Confidence            999753

>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13

Probab=97.14  E-value=0.00075  Score=53.87  Aligned_cols=102  Identities=18%  Similarity=0.205  Sum_probs=66.6

Q ss_pred             HhcCCCCCcEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHcC--------------CC--eeecCCC
Q 026217           45 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKNKFG--------------FD--EAFNYKE  106 (241)
Q Consensus        45 ~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g--~~v~~~~~~~~~~~~~~~~~g--------------~~--~~i~~~~  106 (241)
                      ....+.++++||-.|. |+ |..++.+++..|  .+|++++.++...+.+++.+.              .+  .++..  
T Consensus        99 ~~l~~~~g~~VLDiG~-G~-G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~--  174 (336)
T 2b25_A           99 SMMDINPGDTVLEAGS-GS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHK--  174 (336)
T ss_dssp             HHHTCCTTCEEEEECC-TT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEES--
T ss_pred             HhcCCCCCCEEEEeCC-Cc-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEEC--
Confidence            4457899999999993 44 888888888876  699999999998888774321              01  11111  


Q ss_pred             chhHHHHHHHHCCCCccEEEeCCCc--hhHHHHHHhhccCCEEEEEee
Q 026217          107 EPDLDAALKRYFPEGINIYFENVGG--KMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       107 ~~~~~~~i~~~~~~~~d~v~d~~g~--~~~~~~~~~l~~~G~~v~~g~  152 (241)
                        +..+......++.+|.|+-....  ..+..+.++|+++|+++....
T Consensus       175 --d~~~~~~~~~~~~fD~V~~~~~~~~~~l~~~~~~LkpgG~lv~~~~  220 (336)
T 2b25_A          175 --DISGATEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYVV  220 (336)
T ss_dssp             --CTTCCC-------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEES
T ss_pred             --ChHHcccccCCCCeeEEEECCCCHHHHHHHHHHhcCCCcEEEEEeC
Confidence              11111111122369988865543  467889999999999997643

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.13  E-value=0.0026  Score=49.14  Aligned_cols=89  Identities=12%  Similarity=0.018  Sum_probs=60.2

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCC--CeeecCCCchhHHHHHHHHCCCCccEEEe
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGF--DEAFNYKEEPDLDAALKRYFPEGINIYFE  127 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~g~--~~~i~~~~~~~~~~~i~~~~~~~~d~v~d  127 (241)
                      .+.+++|+|+ |++|.+++..+...|+ +|+++.|+.++.+.+.++++.  ..++.+.   ++.    .   ..+|+|++
T Consensus       119 ~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~---~l~----~---~~~DivIn  187 (272)
T 3pwz_A          119 RNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYE---ALE----G---QSFDIVVN  187 (272)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSG---GGT----T---CCCSEEEE
T ss_pred             cCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHH---Hhc----c---cCCCEEEE
Confidence            5789999996 9999999998889997 999999999887776657654  1222221   111    1   36999999


Q ss_pred             CCCchhHH----HHHHhhccCCEEEEE
Q 026217          128 NVGGKMLD----AVLLNMRIQGRITLC  150 (241)
Q Consensus       128 ~~g~~~~~----~~~~~l~~~G~~v~~  150 (241)
                      |++.....    ...+.++++..++.+
T Consensus       188 aTp~gm~~~~~~i~~~~l~~~~~V~Dl  214 (272)
T 3pwz_A          188 ATSASLTADLPPLPADVLGEAALAYEL  214 (272)
T ss_dssp             CSSGGGGTCCCCCCGGGGTTCSEEEES
T ss_pred             CCCCCCCCCCCCCCHHHhCcCCEEEEe
Confidence            99743211    012345555555544

>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*

Probab=97.13  E-value=0.0042  Score=44.74  Aligned_cols=101  Identities=17%  Similarity=0.229  Sum_probs=68.2

Q ss_pred             HhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCCeeecCCCchhHHHHHHHHCCCC
Q 026217           45 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRYFPEG  121 (241)
Q Consensus        45 ~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~---~g~~~~i~~~~~~~~~~~i~~~~~~~  121 (241)
                      ....+.++++||-.|+ |. |..+..+++.. .+|++++.+++..+.+++.   .+...-+..... ++.+.+...  +.
T Consensus        27 ~~~~~~~~~~vldiG~-G~-G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~-d~~~~~~~~--~~  100 (192)
T 1l3i_A           27 CLAEPGKNDVAVDVGC-GT-GGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEG-DAPEALCKI--PD  100 (192)
T ss_dssp             HHHCCCTTCEEEEESC-TT-SHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEES-CHHHHHTTS--CC
T ss_pred             HhcCCCCCCEEEEECC-CC-CHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEec-CHHHhcccC--CC
Confidence            4457889999999994 44 88888887766 8999999999988888742   343111111111 343322211  36


Q ss_pred             ccEEEeCCC----chhHHHHHHhhccCCEEEEEe
Q 026217          122 INIYFENVG----GKMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       122 ~d~v~d~~g----~~~~~~~~~~l~~~G~~v~~g  151 (241)
                      +|+|+....    ...+..+.+.|+++|.++...
T Consensus       101 ~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~  134 (192)
T 1l3i_A          101 IDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTA  134 (192)
T ss_dssp             EEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             CCEEEECCchHHHHHHHHHHHHhcCCCcEEEEEe
Confidence            999987654    246777888999999998764

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=97.13  E-value=0.00025  Score=53.88  Aligned_cols=76  Identities=16%  Similarity=0.106  Sum_probs=49.1

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHH-cCCEEEEEeCCHH-HHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKL-VGCYVVGSAGSKD-KVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFEN  128 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~-~g~~v~~~~~~~~-~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~  128 (241)
                      .+.+++|+||++++|.+.++.+.. .|++|+++.++++ ..+.+.     ....|..+..++...+.....+++|+++++
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~~~~~-----~~~~Dv~~~~~v~~~~~~~~~~~id~lv~n   77 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAENLK-----FIKADLTKQQDITNVLDIIKNVSFDGIFLN   77 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCCTTEE-----EEECCTTCHHHHHHHHHHTTTCCEEEEEEC
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccccccce-----EEecCcCCHHHHHHHHHHHHhCCCCEEEEC
Confidence            467899999999999998877766 7889999887643 111110     012344444234444433333389999999


Q ss_pred             CCc
Q 026217          129 VGG  131 (241)
Q Consensus       129 ~g~  131 (241)
                      +|.
T Consensus        78 Ag~   80 (244)
T 4e4y_A           78 AGI   80 (244)
T ss_dssp             CCC
T ss_pred             Ccc
Confidence            983

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=97.13  E-value=0.0028  Score=48.94  Aligned_cols=95  Identities=16%  Similarity=0.050  Sum_probs=64.8

Q ss_pred             cCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHH
Q 026217           32 LGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLD  111 (241)
Q Consensus        32 l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~  111 (241)
                      +||....+...+.+..---.|.+++|.|+++.+|..+..++...|++|++..+..                    . ++.
T Consensus       141 ~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T--------------------~-~L~  199 (286)
T 4a5o_A          141 RPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT--------------------R-DLA  199 (286)
T ss_dssp             CCHHHHHHHHHHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC--------------------S-CHH
T ss_pred             CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC--------------------c-CHH
Confidence            3444444444443322234789999999877799999999999999998876321                    1 444


Q ss_pred             HHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeee
Q 026217          112 AALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI  153 (241)
Q Consensus       112 ~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~  153 (241)
                      +.++     .+|+|+.++|...+ --.+.++++..++.+|..
T Consensus       200 ~~~~-----~ADIVI~Avg~p~~-I~~~~vk~GavVIDvgi~  235 (286)
T 4a5o_A          200 DHVS-----RADLVVVAAGKPGL-VKGEWIKEGAIVIDVGIN  235 (286)
T ss_dssp             HHHH-----TCSEEEECCCCTTC-BCGGGSCTTCEEEECCSC
T ss_pred             HHhc-----cCCEEEECCCCCCC-CCHHHcCCCeEEEEeccc
Confidence            4554     38999999996432 122457888888888864

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=97.13  E-value=0.0021  Score=49.61  Aligned_cols=96  Identities=14%  Similarity=0.033  Sum_probs=64.6

Q ss_pred             cCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHH
Q 026217           32 LGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLD  111 (241)
Q Consensus        32 l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~  111 (241)
                      +||....+...+.+..---.|.+++|.|+++.+|..+..++...|++|++..+..                    . ++.
T Consensus       140 ~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t--------------------~-~L~  198 (285)
T 3p2o_A          140 LPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT--------------------K-DLS  198 (285)
T ss_dssp             CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC--------------------S-CHH
T ss_pred             CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc--------------------h-hHH
Confidence            3444444444443332234789999999877799999999999999988876421                    1 344


Q ss_pred             HHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeeec
Q 026217          112 AALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMIS  154 (241)
Q Consensus       112 ~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  154 (241)
                      +.++     .+|+|+.++|...+ --.+.++++..++.+|...
T Consensus       199 ~~~~-----~ADIVI~Avg~p~~-I~~~~vk~GavVIDVgi~~  235 (285)
T 3p2o_A          199 LYTR-----QADLIIVAAGCVNL-LRSDMVKEGVIVVDVGINR  235 (285)
T ss_dssp             HHHT-----TCSEEEECSSCTTC-BCGGGSCTTEEEEECCCEE
T ss_pred             HHhh-----cCCEEEECCCCCCc-CCHHHcCCCeEEEEeccCc
Confidence            4443     38999999996432 1234578888888887643

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=97.13  E-value=0.00076  Score=54.47  Aligned_cols=74  Identities=12%  Similarity=0.108  Sum_probs=50.9

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHcCCCe-eecCC-CchhHHHHHHHHCCCCccEEEeC
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKFGFDE-AFNYK-EEPDLDAALKRYFPEGINIYFEN  128 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~-g~~v~~~~~~~~~~~~~~~~~g~~~-~i~~~-~~~~~~~~i~~~~~~~~d~v~d~  128 (241)
                      +.+|||+||+|.+|...++.+... |.+|+++++++++...+.+..+... ..|.. +...+.+.+.     ++|+||++
T Consensus        24 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~-----~~d~Vih~   98 (372)
T 3slg_A           24 AKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVK-----KCDVILPL   98 (372)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHH-----HCSEEEEC
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhc-----cCCEEEEc
Confidence            468999999999999999988887 8999999998766554431122221 23444 4312333333     59999998


Q ss_pred             CC
Q 026217          129 VG  130 (241)
Q Consensus       129 ~g  130 (241)
                      ++
T Consensus        99 A~  100 (372)
T 3slg_A           99 VA  100 (372)
T ss_dssp             BC
T ss_pred             Cc
Confidence            87

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=97.12  E-value=0.003  Score=49.13  Aligned_cols=95  Identities=13%  Similarity=0.011  Sum_probs=63.9

Q ss_pred             cCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHH
Q 026217           32 LGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLD  111 (241)
Q Consensus        32 l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~  111 (241)
                      +||....+...+.+..---.|.+++|.|+++.+|..+..++...|++|++..+...                     ++.
T Consensus       145 ~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~---------------------~l~  203 (300)
T 4a26_A          145 TPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTS---------------------TED  203 (300)
T ss_dssp             CCHHHHHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSC---------------------HHH
T ss_pred             CCCCHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCC---------------------Cch
Confidence            34444444444533323347899999998677999999999999999988875221                     222


Q ss_pred             --HHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeee
Q 026217          112 --AALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI  153 (241)
Q Consensus       112 --~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~  153 (241)
                        +.++     .+|+|+.++|...+ --.+.++++..++.+|..
T Consensus       204 l~~~~~-----~ADIVI~Avg~p~~-I~~~~vk~GavVIDvgi~  241 (300)
T 4a26_A          204 MIDYLR-----TADIVIAAMGQPGY-VKGEWIKEGAAVVDVGTT  241 (300)
T ss_dssp             HHHHHH-----TCSEEEECSCCTTC-BCGGGSCTTCEEEECCCE
T ss_pred             hhhhhc-----cCCEEEECCCCCCC-CcHHhcCCCcEEEEEecc
Confidence              3333     38999999986422 122457888888888864

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=97.12  E-value=0.0034  Score=49.61  Aligned_cols=88  Identities=18%  Similarity=0.138  Sum_probs=64.3

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCC
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV  129 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~  129 (241)
                      -.|.+|.|+|. |.+|...++.++..|.+|++.++++++. .+. ++|....       ++.+.+.     ..|+|+.++
T Consensus       140 l~g~~vgIIG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~-~~g~~~~-------~l~ell~-----~aDvVvl~~  204 (313)
T 2ekl_A          140 LAGKTIGIVGF-GRIGTKVGIIANAMGMKVLAYDILDIRE-KAE-KINAKAV-------SLEELLK-----NSDVISLHV  204 (313)
T ss_dssp             CTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSCCHH-HHH-HTTCEEC-------CHHHHHH-----HCSEEEECC
T ss_pred             CCCCEEEEEee-CHHHHHHHHHHHHCCCEEEEECCCcchh-HHH-hcCceec-------CHHHHHh-----hCCEEEEec
Confidence            35789999995 9999999999999999999999877654 355 6776421       3333443     389999888


Q ss_pred             Cc-h----hH-HHHHHhhccCCEEEEEee
Q 026217          130 GG-K----ML-DAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       130 g~-~----~~-~~~~~~l~~~G~~v~~g~  152 (241)
                      .. .    .+ ...+..+++++.++.++.
T Consensus       205 P~~~~t~~li~~~~l~~mk~ga~lIn~ar  233 (313)
T 2ekl_A          205 TVSKDAKPIIDYPQFELMKDNVIIVNTSR  233 (313)
T ss_dssp             CCCTTSCCSBCHHHHHHSCTTEEEEESSC
T ss_pred             cCChHHHHhhCHHHHhcCCCCCEEEECCC
Confidence            63 1    12 456677888888877765

>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}

Probab=97.12  E-value=0.034  Score=44.36  Aligned_cols=89  Identities=15%  Similarity=0.256  Sum_probs=59.6

Q ss_pred             cEEEEEcCCchHHHHHHHHHH-Hc-CCEEEE-EeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCC
Q 026217           53 EYVFVSAASGAVGQLVGQFAK-LV-GCYVVG-SAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV  129 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~-~~-g~~v~~-~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~  129 (241)
                      -+|.|+|+ |.+|...++.++ .. ++++++ .++++++.+.+.+++|...+++     ++.+.+.   +..+|+|+.|+
T Consensus         9 ~~v~iiG~-G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~-----~~~~~l~---~~~~D~V~i~t   79 (346)
T 3cea_A            9 LRAAIIGL-GRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYT-----NYKDMID---TENIDAIFIVA   79 (346)
T ss_dssp             EEEEEECC-STTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEES-----CHHHHHT---TSCCSEEEECS
T ss_pred             ceEEEEcC-CHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccC-----CHHHHhc---CCCCCEEEEeC
Confidence            47999995 999998888776 54 677655 4666777766554778754432     3333332   12699999999


Q ss_pred             Cc-hhHHHHHHhhccCCEEEEEe
Q 026217          130 GG-KMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       130 g~-~~~~~~~~~l~~~G~~v~~g  151 (241)
                      .. .+...+..+++.| +-+.+.
T Consensus        80 p~~~h~~~~~~al~~G-~~v~~e  101 (346)
T 3cea_A           80 PTPFHPEMTIYAMNAG-LNVFCE  101 (346)
T ss_dssp             CGGGHHHHHHHHHHTT-CEEEEC
T ss_pred             ChHhHHHHHHHHHHCC-CEEEEc
Confidence            86 5667777777764 544443

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=97.09  E-value=0.0011  Score=53.40  Aligned_cols=74  Identities=11%  Similarity=0.166  Sum_probs=44.4

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHH--HHHHHHc-------CCC-e--eecCCCchhHHHHHHHHCCC
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKV--DLLKNKF-------GFD-E--AFNYKEEPDLDAALKRYFPE  120 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~--~~~~~~~-------g~~-~--~i~~~~~~~~~~~i~~~~~~  120 (241)
                      .+|+|+||+|.+|..+++.+...|.+|+++++++++.  +.+. .+       +.. .  ..|..+...+.+.+...   
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (372)
T 1db3_A            2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVD-HIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---   77 (372)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC----------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHH-HHhhccccCCCceEEEECCCCCHHHHHHHHHhc---
Confidence            4799999999999999998888999999999876531  2222 21       111 1  12343331233333322   


Q ss_pred             CccEEEeCCC
Q 026217          121 GINIYFENVG  130 (241)
Q Consensus       121 ~~d~v~d~~g  130 (241)
                      ++|+||++++
T Consensus        78 ~~d~vih~A~   87 (372)
T 1db3_A           78 QPDEVYNLGA   87 (372)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCc
Confidence            5899999987

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.09  E-value=0.0036  Score=48.20  Aligned_cols=100  Identities=15%  Similarity=0.138  Sum_probs=66.2

Q ss_pred             HHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHH
Q 026217           37 MTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKR  116 (241)
Q Consensus        37 ~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~  116 (241)
                      -|=+.++.+...-..+.+++|+|+ |++|.+++..+...|.+|+++.|+.++.+.+. +++.. +..+.+-         
T Consensus       103 NTD~~Gf~~~L~~~~~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~~~-~~~~~~l---------  170 (269)
T 3phh_A          103 NTDALGFYLSLKQKNYQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLGCD-CFMEPPK---------  170 (269)
T ss_dssp             CCHHHHHHHHCC---CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHTCE-EESSCCS---------
T ss_pred             cChHHHHHHHHHHcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCe-EecHHHh---------
Confidence            344444433222112889999996 99999999999999999999999999888887 78753 3333221         


Q ss_pred             HCCCCccEEEeCCCch-----hH--HHHHHhhccCCEEEEEe
Q 026217          117 YFPEGINIYFENVGGK-----ML--DAVLLNMRIQGRITLCG  151 (241)
Q Consensus       117 ~~~~~~d~v~d~~g~~-----~~--~~~~~~l~~~G~~v~~g  151 (241)
                       .  .+|+|++|++..     .+  ......++++..++.+.
T Consensus       171 -~--~~DiVInaTp~Gm~~~~~l~~~~l~~~l~~~~~v~D~v  209 (269)
T 3phh_A          171 -S--AFDLIINATSASLHNELPLNKEVLKGYFKEGKLAYDLA  209 (269)
T ss_dssp             -S--CCSEEEECCTTCCCCSCSSCHHHHHHHHHHCSEEEESC
T ss_pred             -c--cCCEEEEcccCCCCCCCCCChHHHHhhCCCCCEEEEeC
Confidence             0  599999998732     12  11222566776666553

>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13

Probab=97.08  E-value=0.0024  Score=49.44  Aligned_cols=103  Identities=7%  Similarity=0.064  Sum_probs=69.0

Q ss_pred             HHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHc----CCCeeecCCCchhHHHHHHH
Q 026217           43 FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKNKF----GFDEAFNYKEEPDLDAALKR  116 (241)
Q Consensus        43 l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~--g~~v~~~~~~~~~~~~~~~~~----g~~~~i~~~~~~~~~~~i~~  116 (241)
                      +.....++++++||-.|  .|.|..+..+++..  +.+|++++.+++..+.+++.+    |.+.+ ..... ++.+   .
T Consensus       102 ~~~~~~~~~~~~VLD~G--~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v-~~~~~-d~~~---~  174 (275)
T 1yb2_A          102 IIMRCGLRPGMDILEVG--VGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNV-RTSRS-DIAD---F  174 (275)
T ss_dssp             ----CCCCTTCEEEEEC--CTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTE-EEECS-CTTT---C
T ss_pred             HHHHcCCCCcCEEEEec--CCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcE-EEEEC-chhc---c
Confidence            33446788999999998  34788888888874  579999999999888887443    43321 11111 2211   1


Q ss_pred             HCCCCccEEEeCCCc--hhHHHHHHhhccCCEEEEEee
Q 026217          117 YFPEGINIYFENVGG--KMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       117 ~~~~~~d~v~d~~g~--~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      ..++.+|+|+.....  ..+..+.+.|+++|+++....
T Consensus       175 ~~~~~fD~Vi~~~~~~~~~l~~~~~~LkpgG~l~i~~~  212 (275)
T 1yb2_A          175 ISDQMYDAVIADIPDPWNHVQKIASMMKPGSVATFYLP  212 (275)
T ss_dssp             CCSCCEEEEEECCSCGGGSHHHHHHTEEEEEEEEEEES
T ss_pred             CcCCCccEEEEcCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence            122379999875553  578889999999999988653

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=97.08  E-value=0.0034  Score=48.17  Aligned_cols=93  Identities=11%  Similarity=-0.020  Sum_probs=65.8

Q ss_pred             cCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHH
Q 026217           32 LGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLD  111 (241)
Q Consensus        32 l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~  111 (241)
                      +||.......++.+. + -.|.+++|.|+++.+|..+..++...|++|++..+.                    .. ++.
T Consensus       132 ~PcTp~gv~~lL~~~-~-l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~--------------------t~-~L~  188 (276)
T 3ngx_A          132 VPATPRAVIDIMDYY-G-YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK--------------------TK-DIG  188 (276)
T ss_dssp             CCHHHHHHHHHHHHH-T-CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT--------------------CS-CHH
T ss_pred             CCCcHHHHHHHHHHh-C-cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC--------------------cc-cHH
Confidence            344444555555443 4 689999999987779999999999999999887642                    12 555


Q ss_pred             HHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeee
Q 026217          112 AALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI  153 (241)
Q Consensus       112 ~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~  153 (241)
                      +.+++     +|+++.++|...+ ---+.++++..++.+|..
T Consensus       189 ~~~~~-----ADIVI~Avg~p~~-I~~~~vk~GavVIDvgi~  224 (276)
T 3ngx_A          189 SMTRS-----SKIVVVAVGRPGF-LNREMVTPGSVVIDVGIN  224 (276)
T ss_dssp             HHHHH-----SSEEEECSSCTTC-BCGGGCCTTCEEEECCCE
T ss_pred             Hhhcc-----CCEEEECCCCCcc-ccHhhccCCcEEEEeccC
Confidence            56654     8999999996422 112457888888888764

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=97.08  E-value=0.0051  Score=46.67  Aligned_cols=76  Identities=17%  Similarity=0.181  Sum_probs=52.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           54 YVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~-g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      +|+|.|++|.+|+..++.+... +.+++++....+..+.+. ..+.|.++|...+....+.+......++++|+.++|
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~-~~~~DvvIDfT~p~a~~~~~~~a~~~g~~~VigTTG   78 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLT-DGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTG   78 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHH-HTTCCEEEECSCTTTHHHHHHHHHHTTCEEEECCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHh-ccCCcEEEEccChHHHHHHHHHHHHcCCCEEEcCCC
Confidence            5899999999999999988766 888887775544444444 335677777776533444444333346888888887

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=97.08  E-value=0.00032  Score=54.07  Aligned_cols=95  Identities=14%  Similarity=0.090  Sum_probs=59.9

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC-eeecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~-~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      +.+|+|+||+|++|..+++.+...|++|+++++++.+..    ..+.. ...|..+. +   .+.+... ++|+|++++|
T Consensus         3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~----~~~~~~~~~Dl~d~-~---~~~~~~~-~~D~vi~~Ag   73 (267)
T 3rft_A            3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA----GPNEECVQCDLADA-N---AVNAMVA-GCDGIVHLGG   73 (267)
T ss_dssp             EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC----CTTEEEEECCTTCH-H---HHHHHHT-TCSEEEECCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc----CCCCEEEEcCCCCH-H---HHHHHHc-CCCEEEECCC
Confidence            468999999999999999998889999999998764332    11111 12344443 2   2222222 5999999987


Q ss_pred             c---hhHH-----------HHHHhhcc--CCEEEEEeeecc
Q 026217          131 G---KMLD-----------AVLLNMRI--QGRITLCGMISQ  155 (241)
Q Consensus       131 ~---~~~~-----------~~~~~l~~--~G~~v~~g~~~~  155 (241)
                      .   ..+.           .+++.+..  .++++.+++...
T Consensus        74 ~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~  114 (267)
T 3rft_A           74 ISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHT  114 (267)
T ss_dssp             CCSCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGG
T ss_pred             CcCcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHH
Confidence            3   1111           22333333  368998887543

>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}

Probab=97.07  E-value=0.0033  Score=47.43  Aligned_cols=95  Identities=14%  Similarity=0.057  Sum_probs=65.6

Q ss_pred             CCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEe
Q 026217           48 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFE  127 (241)
Q Consensus        48 ~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d  127 (241)
                      .++++.+||-.|  .|.|..+..+++. |.+|++++.+++..+.++ +. . .++.   . +..+.+....++.+|+|+.
T Consensus        38 ~~~~~~~vLDiG--cG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~-~~-~-~~~~---~-d~~~~~~~~~~~~fD~i~~  107 (240)
T 3dli_A           38 YFKGCRRVLDIG--CGRGEFLELCKEE-GIESIGVDINEDMIKFCE-GK-F-NVVK---S-DAIEYLKSLPDKYLDGVMI  107 (240)
T ss_dssp             GTTTCSCEEEET--CTTTHHHHHHHHH-TCCEEEECSCHHHHHHHH-TT-S-EEEC---S-CHHHHHHTSCTTCBSEEEE
T ss_pred             hhcCCCeEEEEe--CCCCHHHHHHHhC-CCcEEEEECCHHHHHHHH-hh-c-ceee---c-cHHHHhhhcCCCCeeEEEE
Confidence            467889999998  4566666666665 889999999999999998 43 2 2221   1 3333333334458999986


Q ss_pred             CCC---------chhHHHHHHhhccCCEEEEEee
Q 026217          128 NVG---------GKMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       128 ~~g---------~~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      ...         ...+..+.++|+++|.++....
T Consensus       108 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  141 (240)
T 3dli_A          108 SHFVEHLDPERLFELLSLCYSKMKYSSYIVIESP  141 (240)
T ss_dssp             ESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEE
T ss_pred             CCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeC
Confidence            432         1356788889999999987543

>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*

Probab=97.07  E-value=0.002  Score=47.65  Aligned_cols=95  Identities=15%  Similarity=0.086  Sum_probs=66.7

Q ss_pred             cCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe--eecCCCchhHHHHHHHHCCCCccE
Q 026217           47 CSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFPEGINI  124 (241)
Q Consensus        47 ~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~--~i~~~~~~~~~~~i~~~~~~~~d~  124 (241)
                      ..+.++.+||-.|  .|.|..+..+++. |.+|++++.++...+.++ +.+...  ++..    ++.+ +  ..++.+|+
T Consensus        42 ~~~~~~~~vLdiG--~G~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~-~~~~~~~~~~~~----d~~~-~--~~~~~~D~  110 (218)
T 3ou2_A           42 RAGNIRGDVLELA--SGTGYWTRHLSGL-ADRVTALDGSAEMIAEAG-RHGLDNVEFRQQ----DLFD-W--TPDRQWDA  110 (218)
T ss_dssp             TTTTSCSEEEEES--CTTSHHHHHHHHH-SSEEEEEESCHHHHHHHG-GGCCTTEEEEEC----CTTS-C--CCSSCEEE
T ss_pred             hcCCCCCeEEEEC--CCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHH-hcCCCCeEEEec----cccc-C--CCCCceeE
Confidence            3478889999998  3457788888877 889999999999999998 565332  2211    1111 1  22348999


Q ss_pred             EEeCCC---------chhHHHHHHhhccCCEEEEEee
Q 026217          125 YFENVG---------GKMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       125 v~d~~g---------~~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      |+....         ...+..+.+.|+++|.++....
T Consensus       111 v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  147 (218)
T 3ou2_A          111 VFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDV  147 (218)
T ss_dssp             EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             EEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence            986543         1246778889999999988765

>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18

Probab=97.06  E-value=0.0044  Score=48.29  Aligned_cols=98  Identities=5%  Similarity=-0.030  Sum_probs=67.9

Q ss_pred             CCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCC---eeecCCCchhHHHHHHHHCCCC
Q 026217           48 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFD---EAFNYKEEPDLDAALKRYFPEG  121 (241)
Q Consensus        48 ~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~---~g~~---~~i~~~~~~~~~~~i~~~~~~~  121 (241)
                      .+.++.+||-.|  .|.|..+..+++..|++|++++.++...+.+++.   .|..   .++..+-. ++     ...++.
T Consensus        79 ~~~~~~~vLDiG--cG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~-~~-----~~~~~~  150 (297)
T 2o57_A           79 VLQRQAKGLDLG--AGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFL-EI-----PCEDNS  150 (297)
T ss_dssp             CCCTTCEEEEET--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTT-SC-----SSCTTC
T ss_pred             CCCCCCEEEEeC--CCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcc-cC-----CCCCCC
Confidence            778999999998  4578888889888899999999999888777633   2331   12211111 11     012247


Q ss_pred             ccEEEeCCC-------chhHHHHHHhhccCCEEEEEeee
Q 026217          122 INIYFENVG-------GKMLDAVLLNMRIQGRITLCGMI  153 (241)
Q Consensus       122 ~d~v~d~~g-------~~~~~~~~~~l~~~G~~v~~g~~  153 (241)
                      +|+|+....       ...+..+.++|+++|+++.....
T Consensus       151 fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~  189 (297)
T 2o57_A          151 YDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPM  189 (297)
T ss_dssp             EEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred             EeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEec
Confidence            999986543       13578888999999999887643

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=97.06  E-value=0.0018  Score=51.10  Aligned_cols=91  Identities=12%  Similarity=0.120  Sum_probs=58.4

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHH--HHcCCCe-eecCCCchhHHHHHHHHCCCCccEEEeC
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD-KVDLLK--NKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFEN  128 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~-~~~~~~--~~~g~~~-~i~~~~~~~~~~~i~~~~~~~~d~v~d~  128 (241)
                      .+|+|+||+|.+|...++.+...|.+|++++|+++ +.+.+.  +..++.. ..|..+..++...+    . ++|+||.+
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~----~-~~d~vi~~   86 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELM----K-KVDVVISA   86 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHH----T-TCSEEEEC
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHH----c-CCCEEEEC
Confidence            46999999999999999999999999999998764 333222  0345432 23554431233333    2 59999999


Q ss_pred             CCch---hHHHHHHhhccC---CEEE
Q 026217          129 VGGK---MLDAVLLNMRIQ---GRIT  148 (241)
Q Consensus       129 ~g~~---~~~~~~~~l~~~---G~~v  148 (241)
                      ++..   ....+++.+...   .+++
T Consensus        87 a~~~~~~~~~~l~~aa~~~g~v~~~v  112 (318)
T 2r6j_A           87 LAFPQILDQFKILEAIKVAGNIKRFL  112 (318)
T ss_dssp             CCGGGSTTHHHHHHHHHHHCCCCEEE
T ss_pred             CchhhhHHHHHHHHHHHhcCCCCEEE
Confidence            9842   334455555432   3665

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=97.05  E-value=0.0062  Score=48.68  Aligned_cols=74  Identities=12%  Similarity=0.166  Sum_probs=49.1

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH----HHHHHHHHc------CCCe-eecCCCchhHHHHHHHHCCC
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD----KVDLLKNKF------GFDE-AFNYKEEPDLDAALKRYFPE  120 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~----~~~~~~~~~------g~~~-~i~~~~~~~~~~~i~~~~~~  120 (241)
                      +.+|||+||+|.+|..+++.+...|.+|+++++++.    +.+.+.+.+      +... ..|..+. +   .+.+... 
T Consensus        27 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~---~~~~~~~-  101 (352)
T 1sb8_A           27 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNL-D---DCNNACA-  101 (352)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSH-H---HHHHHHT-
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCH-H---HHHHHhc-
Confidence            468999999999999999999889999999998642    333333222      1111 2244333 2   2222222 


Q ss_pred             CccEEEeCCC
Q 026217          121 GINIYFENVG  130 (241)
Q Consensus       121 ~~d~v~d~~g  130 (241)
                      ++|+||++++
T Consensus       102 ~~d~vih~A~  111 (352)
T 1sb8_A          102 GVDYVLHQAA  111 (352)
T ss_dssp             TCSEEEECCS
T ss_pred             CCCEEEECCc
Confidence            5999999998

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=97.05  E-value=0.0012  Score=53.50  Aligned_cols=36  Identities=17%  Similarity=0.255  Sum_probs=32.2

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK   88 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~   88 (241)
                      .+|||+||+|.+|..+++.+...|.+|+++++++++
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~   64 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSN   64 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSS
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCcc
Confidence            579999999999999999998899999999987543

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=97.04  E-value=0.0021  Score=51.09  Aligned_cols=74  Identities=24%  Similarity=0.238  Sum_probs=47.8

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH---HHHHHcC-----CCe-eecCCCchhHHHHHHHHCCCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVD---LLKNKFG-----FDE-AFNYKEEPDLDAALKRYFPEG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~---~~~~~~g-----~~~-~i~~~~~~~~~~~i~~~~~~~  121 (241)
                      .+.+|||+||+|.+|..+++.+...|.+|++++++++..+   .+. .+.     ... ..|..+...+...+.     +
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----~   77 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLL-DLPKAETHLTLWKADLADEGSFDEAIK-----G   77 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHH-TSTTHHHHEEEEECCTTSTTTTHHHHT-----T
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHH-hcccCCCeEEEEEcCCCCHHHHHHHHc-----C
Confidence            4678999999999999999988889999999988765332   222 221     111 123333313333332     5


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|+||.+++
T Consensus        78 ~d~Vih~A~   86 (337)
T 2c29_D           78 CTGVFHVAT   86 (337)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEEecc
Confidence            899999875

>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}

Probab=97.04  E-value=0.0044  Score=48.88  Aligned_cols=96  Identities=9%  Similarity=0.096  Sum_probs=66.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHcCCC--eeecCCCchhHHHHHHHHCCCCccEEEeCC-
Q 026217           54 YVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKFGFD--EAFNYKEEPDLDAALKRYFPEGINIYFENV-  129 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~-g~~v~~~~~~~~~~~~~~~~~g~~--~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~-  129 (241)
                      +||++|  +|.|..+..+++.+ +.+|+++..+++-.+.+++.++..  .-+..... +..+.+....++.+|+|+--. 
T Consensus        92 rVLdIG--~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~-Da~~~l~~~~~~~fDvIi~D~~  168 (317)
T 3gjy_A           92 RITHLG--GGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVD-DARMVAESFTPASRDVIIRDVF  168 (317)
T ss_dssp             EEEEES--CGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEES-CHHHHHHTCCTTCEEEEEECCS
T ss_pred             EEEEEE--CCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEEC-cHHHHHhhccCCCCCEEEECCC
Confidence            899999  67788888888866 779999999999999999666532  10111111 444445444345899887522 


Q ss_pred             C----------chhHHHHHHhhccCCEEEEEee
Q 026217          130 G----------GKMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       130 g----------~~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      .          .+.+..+.++|+++|.++.-..
T Consensus       169 ~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~  201 (317)
T 3gjy_A          169 AGAITPQNFTTVEFFEHCHRGLAPGGLYVANCG  201 (317)
T ss_dssp             TTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             CccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence            1          1357788899999999886543

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=97.03  E-value=0.0026  Score=54.97  Aligned_cols=78  Identities=19%  Similarity=0.250  Sum_probs=50.1

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC--HHHHHHHHHHcCCCeeecCCCc-hh---HHHHHHHHCCCCccE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS--KDKVDLLKNKFGFDEAFNYKEE-PD---LDAALKRYFPEGINI  124 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~--~~~~~~~~~~~g~~~~i~~~~~-~~---~~~~i~~~~~~~~d~  124 (241)
                      .|.+++|+||++++|++.++.+...|++|++.++.  ++-.+.++ +.|...+....+- .+   +.+.+.+.. |++|+
T Consensus       321 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~-~~g~~~~~~~~Dv~~~~~~~~~~~~~~~-G~iDi  398 (604)
T 2et6_A          321 KDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIK-AAGGEAWPDQHDVAKDSEAIIKNVIDKY-GTIDI  398 (604)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHH-HTTCEEEEECCCHHHHHHHHHHHHHHHH-SCCCE
T ss_pred             CCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHH-hcCCeEEEEEcChHHHHHHHHHHHHHhc-CCCCE
Confidence            36789999999999999999999999999998743  22234444 4454322222111 02   222232222 47999


Q ss_pred             EEeCCC
Q 026217          125 YFENVG  130 (241)
Q Consensus       125 v~d~~g  130 (241)
                      +++++|
T Consensus       399 LVnNAG  404 (604)
T 2et6_A          399 LVNNAG  404 (604)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999988

>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7

Probab=97.02  E-value=0.0019  Score=48.42  Aligned_cols=101  Identities=12%  Similarity=0.068  Sum_probs=68.4

Q ss_pred             HHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC---eeecCCCchhHHHHHHHHCC
Q 026217           43 FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEPDLDAALKRYFP  119 (241)
Q Consensus        43 l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~---~~i~~~~~~~~~~~i~~~~~  119 (241)
                      +.+...+.++++||-.|. | .|..+..+++.. .+|++++.+++..+.+++.+...   .++..    +..+...  ..
T Consensus        62 ~~~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~----d~~~~~~--~~  132 (231)
T 1vbf_A           62 MLDELDLHKGQKVLEIGT-G-IGYYTALIAEIV-DKVVSVEINEKMYNYASKLLSYYNNIKLILG----DGTLGYE--EE  132 (231)
T ss_dssp             HHHHTTCCTTCEEEEECC-T-TSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTCSSEEEEES----CGGGCCG--GG
T ss_pred             HHHhcCCCCCCEEEEEcC-C-CCHHHHHHHHHc-CEEEEEeCCHHHHHHHHHHHhhcCCeEEEEC----Ccccccc--cC
Confidence            335567889999999993 4 488888888764 89999999999999888444321   12221    1111011  12


Q ss_pred             CCccEEEeCCCc-hhHHHHHHhhccCCEEEEEee
Q 026217          120 EGINIYFENVGG-KMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       120 ~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      +.+|+|+....- .....+.+.|+++|+++..-.
T Consensus       133 ~~fD~v~~~~~~~~~~~~~~~~L~pgG~l~~~~~  166 (231)
T 1vbf_A          133 KPYDRVVVWATAPTLLCKPYEQLKEGGIMILPIG  166 (231)
T ss_dssp             CCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEEC
T ss_pred             CCccEEEECCcHHHHHHHHHHHcCCCcEEEEEEc
Confidence            479999876653 345678889999999987643

>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...

Probab=97.02  E-value=0.0034  Score=46.81  Aligned_cols=101  Identities=11%  Similarity=0.088  Sum_probs=64.1

Q ss_pred             hcCCCCCcEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHH---cCCCeeecCCCchhHHHHHHHHCC-
Q 026217           46 VCSPKQGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRYFP-  119 (241)
Q Consensus        46 ~~~~~~~~~vlI~ga~g~~G~~avqla~~~--g~~v~~~~~~~~~~~~~~~~---~g~~~~i~~~~~~~~~~~i~~~~~-  119 (241)
                      .....++.+||-.|  .+.|..++.+++.+  +.+|++++.+++..+.+++.   .|...-+..... +..+.+..... 
T Consensus        53 l~~~~~~~~vLdiG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~l~~~~~~  129 (221)
T 3u81_A           53 VIREYSPSLVLELG--AYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNG-ASQDLIPQLKKK  129 (221)
T ss_dssp             HHHHHCCSEEEEEC--CTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEES-CHHHHGGGTTTT
T ss_pred             HHHhcCCCEEEEEC--CCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEEC-CHHHHHHHHHHh
Confidence            34456788999998  56788888888875  67999999999988887742   344321222122 44343433332 


Q ss_pred             ---CCccEEEeCCCchh-------HHHHHHhhccCCEEEEE
Q 026217          120 ---EGINIYFENVGGKM-------LDAVLLNMRIQGRITLC  150 (241)
Q Consensus       120 ---~~~d~v~d~~g~~~-------~~~~~~~l~~~G~~v~~  150 (241)
                         +.||+|+-......       +..+ +.|+++|.++.-
T Consensus       130 ~~~~~fD~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~  169 (221)
T 3u81_A          130 YDVDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLAD  169 (221)
T ss_dssp             SCCCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEES
T ss_pred             cCCCceEEEEEcCCcccchHHHHHHHhc-cccCCCeEEEEe
Confidence               47999875443221       1222 789999988764

>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*

Probab=97.01  E-value=0.0019  Score=50.22  Aligned_cols=96  Identities=16%  Similarity=0.141  Sum_probs=64.2

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHc----CC--------CeeecCCCchhHHHHHHH
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKF----GF--------DEAFNYKEEPDLDAALKR  116 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~----g~--------~~~i~~~~~~~~~~~i~~  116 (241)
                      .++.+||+.|  +|.|..+..++++ +. +|++++.+++-.+.+++.+    +.        +.-+..... +..+.+..
T Consensus        74 ~~~~~VLdiG--~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~-D~~~~l~~  149 (281)
T 1mjf_A           74 PKPKRVLVIG--GGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIG-DGFEFIKN  149 (281)
T ss_dssp             SCCCEEEEEE--CTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEES-CHHHHHHH
T ss_pred             CCCCeEEEEc--CCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEEC-chHHHhcc
Confidence            4568999999  5567777788877 65 9999999999999998555    21        110111111 33333443


Q ss_pred             HCCCCccEEEeCCC-----------chhHHHHHHhhccCCEEEEEe
Q 026217          117 YFPEGINIYFENVG-----------GKMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       117 ~~~~~~d~v~d~~g-----------~~~~~~~~~~l~~~G~~v~~g  151 (241)
                        ++.+|+|+-...           .+.+..+.+.|+++|.++...
T Consensus       150 --~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~  193 (281)
T 1mjf_A          150 --NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA  193 (281)
T ss_dssp             --CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred             --cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence              457998874322           235778889999999998753

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=97.00  E-value=0.006  Score=48.65  Aligned_cols=86  Identities=14%  Similarity=0.193  Sum_probs=61.6

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      .+.+|.|+|. |.+|...++.++..|.+|++.++++++ +.+. ++|...    .   ++.+.+.+     .|+|+.++.
T Consensus       149 ~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~-~~g~~~----~---~l~~~l~~-----aDvVil~vp  213 (334)
T 2dbq_A          149 YGKTIGIIGL-GRIGQAIAKRAKGFNMRILYYSRTRKE-EVER-ELNAEF----K---PLEDLLRE-----SDFVVLAVP  213 (334)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCH-HHHH-HHCCEE----C---CHHHHHHH-----CSEEEECCC
T ss_pred             CCCEEEEEcc-CHHHHHHHHHHHhCCCEEEEECCCcch-hhHh-hcCccc----C---CHHHHHhh-----CCEEEECCC
Confidence            4679999995 999999999999999999999988766 5555 666521    1   33334433     788888876


Q ss_pred             c-h----hH-HHHHHhhccCCEEEEEe
Q 026217          131 G-K----ML-DAVLLNMRIQGRITLCG  151 (241)
Q Consensus       131 ~-~----~~-~~~~~~l~~~G~~v~~g  151 (241)
                      . .    .+ ...+..++++..++.++
T Consensus       214 ~~~~t~~~i~~~~~~~mk~~ailIn~s  240 (334)
T 2dbq_A          214 LTRETYHLINEERLKLMKKTAILINIA  240 (334)
T ss_dssp             CCTTTTTCBCHHHHHHSCTTCEEEECS
T ss_pred             CChHHHHhhCHHHHhcCCCCcEEEECC
Confidence            3 1    12 35566777777777665

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=96.99  E-value=0.005  Score=54.94  Aligned_cols=81  Identities=20%  Similarity=0.212  Sum_probs=55.7

Q ss_pred             CCCCcEEEEEcCCchHHHHHHHHHH-HcCC-EEEEEeCCHH-------HHHHHHHHcCCCe---eecCCCchhHHHHHHH
Q 026217           49 PKQGEYVFVSAASGAVGQLVGQFAK-LVGC-YVVGSAGSKD-------KVDLLKNKFGFDE---AFNYKEEPDLDAALKR  116 (241)
Q Consensus        49 ~~~~~~vlI~ga~g~~G~~avqla~-~~g~-~v~~~~~~~~-------~~~~~~~~~g~~~---~i~~~~~~~~~~~i~~  116 (241)
                      +.++.+++|+||+|++|++.++.+. ..|+ +|+.+.++..       -.+.++ ..|...   ..|..+..++...+.+
T Consensus       527 ~~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~-~~G~~v~~~~~Dvsd~~~v~~~~~~  605 (795)
T 3slk_A          527 WDAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLT-AYGAEVSLQACDVADRETLAKVLAS  605 (795)
T ss_dssp             CCTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHH-HTTCEEEEEECCTTCHHHHHHHHHT
T ss_pred             cccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHH-hcCCcEEEEEeecCCHHHHHHHHHH
Confidence            4678999999999999999888776 7899 6899888732       123333 456532   2344554244444544


Q ss_pred             HCCC-CccEEEeCCC
Q 026217          117 YFPE-GINIYFENVG  130 (241)
Q Consensus       117 ~~~~-~~d~v~d~~g  130 (241)
                      .... ++|.+++++|
T Consensus       606 ~~~~~~id~lVnnAG  620 (795)
T 3slk_A          606 IPDEHPLTAVVHAAG  620 (795)
T ss_dssp             SCTTSCEEEEEECCC
T ss_pred             HHHhCCCEEEEECCC
Confidence            4333 7999999987

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=96.99  E-value=0.00059  Score=54.30  Aligned_cols=100  Identities=13%  Similarity=0.123  Sum_probs=60.7

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHHc-CCC-eeecCCCchhHHHHHHHHCCCCccEEEe
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKV-DLLKNKF-GFD-EAFNYKEEPDLDAALKRYFPEGINIYFE  127 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~-~~~~~~~-g~~-~~i~~~~~~~~~~~i~~~~~~~~d~v~d  127 (241)
                      .+.+|||+||+|.+|..+++.+...|.+|+++++++... +.+. .+ +.. ...|..+...+.+.+..   +.+|+||+
T Consensus        20 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~-~~~~~~~~~~Dl~d~~~~~~~~~~---~~~D~vih   95 (333)
T 2q1w_A           20 HMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLK-DHPNLTFVEGSIADHALVNQLIGD---LQPDAVVH   95 (333)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSC-CCTTEEEEECCTTCHHHHHHHHHH---HCCSEEEE
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHh-hcCCceEEEEeCCCHHHHHHHHhc---cCCcEEEE
Confidence            356899999999999999999988999999999864321 1121 11 111 12244443123333322   25999999


Q ss_pred             CCCch-h--------------HHHHHHhhcc-C-CEEEEEeeec
Q 026217          128 NVGGK-M--------------LDAVLLNMRI-Q-GRITLCGMIS  154 (241)
Q Consensus       128 ~~g~~-~--------------~~~~~~~l~~-~-G~~v~~g~~~  154 (241)
                      +++.. .              ...+++.+.+ + ++++.++...
T Consensus        96 ~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~  139 (333)
T 2q1w_A           96 TAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTAL  139 (333)
T ss_dssp             CCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGG
T ss_pred             CceecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECcHH
Confidence            98731 1              1233344433 3 6899887644

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=96.99  E-value=0.0057  Score=47.61  Aligned_cols=86  Identities=6%  Similarity=0.084  Sum_probs=55.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCchh
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKM  133 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~  133 (241)
                      +|+|+||+|.+|...++.+. .|.+|+++++++.       .+    ..|..+...+.+.+...   ++|+||++++...
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-------~~----~~D~~d~~~~~~~~~~~---~~d~vih~a~~~~   66 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-------EF----CGDFSNPKGVAETVRKL---RPDVIVNAAAHTA   66 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-------SS----CCCTTCHHHHHHHHHHH---CCSEEEECCCCCC
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-------cc----cccCCCHHHHHHHHHhc---CCCEEEECcccCC
Confidence            69999999999999998888 7999999997641       11    12333331333333322   5999999987311


Q ss_pred             ------------------HHHHHHhhcc-CCEEEEEeeec
Q 026217          134 ------------------LDAVLLNMRI-QGRITLCGMIS  154 (241)
Q Consensus       134 ------------------~~~~~~~l~~-~G~~v~~g~~~  154 (241)
                                        ...+++.+.. +.+++.++...
T Consensus        67 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~  106 (299)
T 1n2s_A           67 VDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDY  106 (299)
T ss_dssp             HHHHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEGG
T ss_pred             HhhhhcCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEeccc
Confidence                              2334444444 45888877643

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=96.96  E-value=0.0034  Score=50.80  Aligned_cols=73  Identities=14%  Similarity=0.009  Sum_probs=48.9

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHc--CCC-ee--ecCCCchhHHHHHHHHCCCCccE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKDKVDLLKNKF--GFD-EA--FNYKEEPDLDAALKRYFPEGINI  124 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g-~~v~~~~~~~~~~~~~~~~~--g~~-~~--i~~~~~~~~~~~i~~~~~~~~d~  124 (241)
                      .+.+|||+||+|.+|..+++.+...| .+|+++++++.+..  . .+  ... .+  .|..+.    +.+.+... ++|+
T Consensus        31 ~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~-~l~~~~~v~~~~~Dl~d~----~~l~~~~~-~~d~  102 (377)
T 2q1s_A           31 ANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEK--I-NVPDHPAVRFSETSITDD----ALLASLQD-EYDY  102 (377)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCG--G-GSCCCTTEEEECSCTTCH----HHHHHCCS-CCSE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCch--h-hccCCCceEEEECCCCCH----HHHHHHhh-CCCE
Confidence            35689999999999999999999999 99999998754321  1 11  111 12  233332    23443333 6999


Q ss_pred             EEeCCCc
Q 026217          125 YFENVGG  131 (241)
Q Consensus       125 v~d~~g~  131 (241)
                      ||.+++.
T Consensus       103 Vih~A~~  109 (377)
T 2q1s_A          103 VFHLATY  109 (377)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            9999873

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=96.96  E-value=0.0028  Score=49.03  Aligned_cols=90  Identities=10%  Similarity=0.170  Sum_probs=63.4

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCee-ecCCCchhHHHHHHHHCCCCccEEEeCCCc
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEA-FNYKEEPDLDAALKRYFPEGINIYFENVGG  131 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~-i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~  131 (241)
                      .+|||+|| |.+|...++.+...|.+|+++++++++.+.+. ..+...+ .|..+. +         -.++|+||.+++.
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~d~-~---------~~~~d~vi~~a~~   73 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIR-ASGAEPLLWPGEEP-S---------LDGVTHLLISTAP   73 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHH-HTTEEEEESSSSCC-C---------CTTCCEEEECCCC
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHh-hCCCeEEEeccccc-c---------cCCCCEEEECCCc
Confidence            47999998 99999999999889999999999998887776 5554322 233221 1         1369999999973


Q ss_pred             -----hhHHHHHHhhcc----CCEEEEEeeec
Q 026217          132 -----KMLDAVLLNMRI----QGRITLCGMIS  154 (241)
Q Consensus       132 -----~~~~~~~~~l~~----~G~~v~~g~~~  154 (241)
                           ......++.++.    -.+++.++...
T Consensus        74 ~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss~~  105 (286)
T 3ius_A           74 DSGGDPVLAALGDQIAARAAQFRWVGYLSTTA  105 (286)
T ss_dssp             BTTBCHHHHHHHHHHHHTGGGCSEEEEEEEGG
T ss_pred             cccccHHHHHHHHHHHhhcCCceEEEEeecce
Confidence                 123444444433    36888887643

>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}

Probab=96.96  E-value=0.009  Score=44.52  Aligned_cols=101  Identities=15%  Similarity=0.142  Sum_probs=67.6

Q ss_pred             CCCCCcEEEEEcCCchHHHHHHHHHHHcC------CEEEEEeCCHHHHHHHHHHc---C-----CC--eeecCCCchhHH
Q 026217           48 SPKQGEYVFVSAASGAVGQLVGQFAKLVG------CYVVGSAGSKDKVDLLKNKF---G-----FD--EAFNYKEEPDLD  111 (241)
Q Consensus        48 ~~~~~~~vlI~ga~g~~G~~avqla~~~g------~~v~~~~~~~~~~~~~~~~~---g-----~~--~~i~~~~~~~~~  111 (241)
                      .++++++||-.|. |. |..+..+++..+      .+|++++.+++..+.+++.+   +     .+  .++..+....+.
T Consensus        77 ~~~~~~~VLdiG~-G~-G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~  154 (227)
T 2pbf_A           77 VLKPGSRAIDVGS-GS-GYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNE  154 (227)
T ss_dssp             TSCTTCEEEEESC-TT-SHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCH
T ss_pred             hCCCCCEEEEECC-CC-CHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhccc
Confidence            5889999999993 44 888899998876      59999999998888777332   3     11  122111110110


Q ss_pred             HHHHHHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEee
Q 026217          112 AALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       112 ~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      .....  .+.+|+|+..... .....+.+.|+++|+++..-.
T Consensus       155 ~~~~~--~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lv~~~~  194 (227)
T 2pbf_A          155 EEKKE--LGLFDAIHVGASASELPEILVDLLAENGKLIIPIE  194 (227)
T ss_dssp             HHHHH--HCCEEEEEECSBBSSCCHHHHHHEEEEEEEEEEEE
T ss_pred             ccCcc--CCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEEc
Confidence            00011  2369999877663 566888999999999887644

>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}

Probab=96.96  E-value=0.048  Score=43.17  Aligned_cols=88  Identities=13%  Similarity=0.167  Sum_probs=55.9

Q ss_pred             EEEEEcCCchHHHHH-HHHHHHcCCEEEE-EeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCc
Q 026217           54 YVFVSAASGAVGQLV-GQFAKLVGCYVVG-SAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG  131 (241)
Q Consensus        54 ~vlI~ga~g~~G~~a-vqla~~~g~~v~~-~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~  131 (241)
                      +|.|+|+ |.+|... +...+..+.++++ .++++++.+.+.+++|...+++     ++.+.+.   ...+|+|+.|+..
T Consensus         2 ~vgiiG~-G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~~~-----~~~~~l~---~~~~D~V~i~tp~   72 (332)
T 2glx_A            2 RWGLIGA-STIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKSVT-----SVEELVG---DPDVDAVYVSTTN   72 (332)
T ss_dssp             EEEEESC-CHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCCBS-----CHHHHHT---CTTCCEEEECSCG
T ss_pred             eEEEEcc-cHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCcccC-----CHHHHhc---CCCCCEEEEeCCh
Confidence            5889995 9999876 5444447787764 4566666666554777643321     3333332   1269999999986


Q ss_pred             -hhHHHHHHhhccCCEEEEEe
Q 026217          132 -KMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       132 -~~~~~~~~~l~~~G~~v~~g  151 (241)
                       .+...+..++.. |+-+.+.
T Consensus        73 ~~h~~~~~~al~~-Gk~v~~e   92 (332)
T 2glx_A           73 ELHREQTLAAIRA-GKHVLCE   92 (332)
T ss_dssp             GGHHHHHHHHHHT-TCEEEEC
T ss_pred             hHhHHHHHHHHHC-CCeEEEe
Confidence             456666666666 5544443

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=96.96  E-value=0.0043  Score=49.39  Aligned_cols=88  Identities=10%  Similarity=0.050  Sum_probs=59.7

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      .|.+|.|+|. |.+|...++.++..|.+|++.++++++.+.+. ++|....       ++.+.+.     .+|+|+.++.
T Consensus       154 ~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~-~~g~~~~-------~l~e~l~-----~aDvVi~~vp  219 (330)
T 2gcg_A          154 TQSTVGIIGL-GRIGQAIARRLKPFGVQRFLYTGRQPRPEEAA-EFQAEFV-------STPELAA-----QSDFIVVACS  219 (330)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGTCCEEEEESSSCCHHHHH-TTTCEEC-------CHHHHHH-----HCSEEEECCC
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCcchhHHH-hcCceeC-------CHHHHHh-----hCCEEEEeCC
Confidence            4678999995 99999999999999999999998766555555 5554321       2233333     2788888776


Q ss_pred             ch-----hH-HHHHHhhccCCEEEEEee
Q 026217          131 GK-----ML-DAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       131 ~~-----~~-~~~~~~l~~~G~~v~~g~  152 (241)
                      ..     .+ ...+..++++..++.++.
T Consensus       220 ~~~~t~~~i~~~~~~~mk~gailIn~sr  247 (330)
T 2gcg_A          220 LTPATEGLCNKDFFQKMKETAVFINISR  247 (330)
T ss_dssp             CCTTTTTCBSHHHHHHSCTTCEEEECSC
T ss_pred             CChHHHHhhCHHHHhcCCCCcEEEECCC
Confidence            31     12 345566777766665543

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=96.94  E-value=0.00073  Score=53.85  Aligned_cols=72  Identities=14%  Similarity=0.122  Sum_probs=47.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHcCCCe-eecCCCchh-HHHHHHHHCCCCccEEEeCCC
Q 026217           54 YVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPD-LDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~-g~~v~~~~~~~~~~~~~~~~~g~~~-~i~~~~~~~-~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      +|||+||+|.+|..+++.+... |.+|+++++++++.+.+.+..+... ..|..+..+ +.+.+.     ++|+||++++
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~d~vih~A~   76 (345)
T 2bll_A            2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVK-----KCDVVLPLVA   76 (345)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHH-----HCSEEEECBC
T ss_pred             eEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhcc-----CCCEEEEccc
Confidence            6999999999999999988887 8999999988765443220112211 123333102 323332     4899999887

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=96.94  E-value=0.004  Score=62.58  Aligned_cols=83  Identities=16%  Similarity=0.082  Sum_probs=58.1

Q ss_pred             CCCCcEEEEEcCCch-HHHHHHHHHHHcCCEEEEEeCCHHH-----HHHHHHHcCC---C---eeecCCCchhHHHHHHH
Q 026217           49 PKQGEYVFVSAASGA-VGQLVGQFAKLVGCYVVGSAGSKDK-----VDLLKNKFGF---D---EAFNYKEEPDLDAALKR  116 (241)
Q Consensus        49 ~~~~~~vlI~ga~g~-~G~~avqla~~~g~~v~~~~~~~~~-----~~~~~~~~g~---~---~~i~~~~~~~~~~~i~~  116 (241)
                      .-.|.+++|+||++| +|.+.++.+...|++|++++++.++     .+.+.++++.   .   ...|..+..++...+..
T Consensus      2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~ 2212 (3089)
T 3zen_D         2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEW 2212 (3089)
T ss_dssp             CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHH
Confidence            347899999999999 9999999999999999999987655     3444335432   1   12355554244444444


Q ss_pred             HCC------CCccEEEeCCCc
Q 026217          117 YFP------EGINIYFENVGG  131 (241)
Q Consensus       117 ~~~------~~~d~v~d~~g~  131 (241)
                      ...      |++|++++++|.
T Consensus      2213 i~~~~~~~fG~IDILVNNAGi 2233 (3089)
T 3zen_D         2213 VGTEQTESLGPQSIHLKDAQT 2233 (3089)
T ss_dssp             HTSCCEEEESSSEEEECCCCC
T ss_pred             HHhhhhhhcCCCCEEEECCCc
Confidence            443      479999998874

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=96.94  E-value=0.0011  Score=53.85  Aligned_cols=73  Identities=16%  Similarity=0.167  Sum_probs=49.1

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe-eecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      ..+|||+||+|.+|...++.+...|.+|+++++++.+..... ..+... ..|..+...+.+.+     .++|+||++++
T Consensus        29 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~v~~~~~Dl~d~~~~~~~~-----~~~d~Vih~A~  102 (379)
T 2c5a_A           29 NLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED-MFCDEFHLVDLRVMENCLKVT-----EGVDHVFNLAA  102 (379)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGG-GTCSEEEECCTTSHHHHHHHH-----TTCSEEEECCC
T ss_pred             CCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhc-cCCceEEECCCCCHHHHHHHh-----CCCCEEEECce
Confidence            468999999999999999998889999999998765432221 122221 23444431222222     25999999987

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=96.94  E-value=0.01  Score=46.27  Aligned_cols=85  Identities=11%  Similarity=0.034  Sum_probs=58.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCc-h
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG-K  132 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~  132 (241)
                      +|.|+|+ |.+|...+..+...|.+|++.++++++.+.++ +.|...   ..   +..+.+.     .+|+|+.|+.. .
T Consensus         7 ~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~-~~g~~~---~~---~~~~~~~-----~~D~vi~~v~~~~   73 (299)
T 1vpd_A            7 KVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVI-AAGAET---AS---TAKAIAE-----QCDVIITMLPNSP   73 (299)
T ss_dssp             EEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCEE---CS---SHHHHHH-----HCSEEEECCSSHH
T ss_pred             eEEEECc-hHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH-HCCCee---cC---CHHHHHh-----CCCEEEEECCCHH
Confidence            6999995 99999988888888999999999999888887 556421   11   3333333     37888888873 4


Q ss_pred             hHHHHH-------HhhccCCEEEEEe
Q 026217          133 MLDAVL-------LNMRIQGRITLCG  151 (241)
Q Consensus       133 ~~~~~~-------~~l~~~G~~v~~g  151 (241)
                      .....+       ..++++..++.++
T Consensus        74 ~~~~~~~~~~~l~~~l~~~~~vv~~s   99 (299)
T 1vpd_A           74 HVKEVALGENGIIEGAKPGTVLIDMS   99 (299)
T ss_dssp             HHHHHHHSTTCHHHHCCTTCEEEECS
T ss_pred             HHHHHHhCcchHhhcCCCCCEEEECC
Confidence            444443       3455555555543

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=96.94  E-value=0.0033  Score=51.19  Aligned_cols=39  Identities=15%  Similarity=0.053  Sum_probs=31.6

Q ss_pred             CCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 026217           49 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD   87 (241)
Q Consensus        49 ~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~   87 (241)
                      ...+.+|||+||+|.+|..++..+...|.+|+++++...
T Consensus         8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~   46 (404)
T 1i24_A            8 HHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVR   46 (404)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHH
T ss_pred             ccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCc
Confidence            356789999999999999999988889999999987643

>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*

Probab=96.94  E-value=0.0013  Score=50.54  Aligned_cols=97  Identities=13%  Similarity=0.218  Sum_probs=65.1

Q ss_pred             CCCCcEEEEEcCCchHHHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHc---CCCeeecCCCchhHHHHHHHHCCCCc
Q 026217           49 PKQGEYVFVSAASGAVGQLVGQFAKLV---GCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEPDLDAALKRYFPEGI  122 (241)
Q Consensus        49 ~~~~~~vlI~ga~g~~G~~avqla~~~---g~~v~~~~~~~~~~~~~~~~~---g~~~~i~~~~~~~~~~~i~~~~~~~~  122 (241)
                      ++||.+||-.|  .|.|..+..+++..   |++|++++.+++-.+.+++.+   +...-+..... +    +.++..+.+
T Consensus        68 ~~~~~~vLDlG--cGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~-D----~~~~~~~~~  140 (261)
T 4gek_A           68 VQPGTQVYDLG--CSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEG-D----IRDIAIENA  140 (261)
T ss_dssp             CCTTCEEEEET--CTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEES-C----TTTCCCCSE
T ss_pred             CCCCCEEEEEe--CCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeec-c----ccccccccc
Confidence            78999999999  56788888888875   679999999999888887443   32211111111 1    112222368


Q ss_pred             cEEEeCCC-----c----hhHHHHHHhhccCCEEEEEee
Q 026217          123 NIYFENVG-----G----KMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       123 d~v~d~~g-----~----~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      |+|+....     .    ..+..+.+.|+|||+++....
T Consensus       141 d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~  179 (261)
T 4gek_A          141 SMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEK  179 (261)
T ss_dssp             EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEec
Confidence            88875432     1    246788899999999988644

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=96.93  E-value=0.0027  Score=50.01  Aligned_cols=73  Identities=16%  Similarity=0.188  Sum_probs=46.5

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHH---HHHHHHHcCC--C--ee--ecCCCchhHHHHHHHHCCCC
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKDK---VDLLKNKFGF--D--EA--FNYKEEPDLDAALKRYFPEG  121 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~-~~~~---~~~~~~~~g~--~--~~--i~~~~~~~~~~~i~~~~~~~  121 (241)
                      |.+|||+||+|.+|...++.+...|.+|+++++ +++.   .+.+. .+..  .  .+  .|..+...+...+.     +
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----~   74 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLT-NLPGASEKLHFFNADLSNPDSFAAAIE-----G   74 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHH-TSTTHHHHEEECCCCTTCGGGGHHHHT-----T
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHH-hhhccCCceEEEecCCCCHHHHHHHHc-----C
Confidence            468999999999999999999899999999887 5432   22222 2210  0  11  23444313333332     5


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|+||++++
T Consensus        75 ~d~vih~A~   83 (322)
T 2p4h_X           75 CVGIFHTAS   83 (322)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEEcCC
Confidence            899999885

>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*

Probab=96.93  E-value=0.0035  Score=47.66  Aligned_cols=103  Identities=9%  Similarity=0.079  Sum_probs=69.3

Q ss_pred             HHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCC---eeecCCCchhHHHHHH
Q 026217           42 GFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFD---EAFNYKEEPDLDAALK  115 (241)
Q Consensus        42 ~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~---~g~~---~~i~~~~~~~~~~~i~  115 (241)
                      .+.....+.++.+||-.|  .|.|..+..+++..+.+|++++.++...+.+++.   .|..   .++..+.. ++     
T Consensus        37 ~l~~l~~~~~~~~vLDiG--~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~-~~-----  108 (257)
T 3f4k_A           37 AVSFINELTDDAKIADIG--CGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMD-NL-----  108 (257)
T ss_dssp             HHTTSCCCCTTCEEEEET--CTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT-SC-----
T ss_pred             HHHHHhcCCCCCeEEEeC--CCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChh-hC-----
Confidence            343334678899999999  4568899999999878999999999888877633   2332   12111111 11     


Q ss_pred             HHCCCCccEEEeCCC------chhHHHHHHhhccCCEEEEEee
Q 026217          116 RYFPEGINIYFENVG------GKMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       116 ~~~~~~~d~v~d~~g------~~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      ...++.+|+|+....      ...+..+.++|+|+|+++....
T Consensus       109 ~~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~  151 (257)
T 3f4k_A          109 PFQNEELDLIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSEA  151 (257)
T ss_dssp             SSCTTCEEEEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred             CCCCCCEEEEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEEe
Confidence            012247999975332      2467888889999999988753

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=96.92  E-value=0.003  Score=48.44  Aligned_cols=89  Identities=12%  Similarity=0.148  Sum_probs=56.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCchh
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKM  133 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~  133 (241)
                      +|+|+||+|.+|...++.+.. |.+|++++++++. +  .   +  ...|..+...+...+...   ++|+|++++|...
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~-~--~---~--~~~Dl~~~~~~~~~~~~~---~~d~vi~~a~~~~   69 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEI-Q--G---G--YKLDLTDFPRLEDFIIKK---RPDVIINAAAMTD   69 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCC-T--T---C--EECCTTSHHHHHHHHHHH---CCSEEEECCCCCC
T ss_pred             EEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcC-C--C---C--ceeccCCHHHHHHHHHhc---CCCEEEECCcccC
Confidence            489999999999998888774 8999999987532 1  1   2  334444431333333322   5999999997311


Q ss_pred             ------------------HHHHHHhhc-cCCEEEEEeeec
Q 026217          134 ------------------LDAVLLNMR-IQGRITLCGMIS  154 (241)
Q Consensus       134 ------------------~~~~~~~l~-~~G~~v~~g~~~  154 (241)
                                        ...+++.+. .+++++.++...
T Consensus        70 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~iv~~SS~~  109 (273)
T 2ggs_A           70 VDKCEIEKEKAYKINAEAVRHIVRAGKVIDSYIVHISTDY  109 (273)
T ss_dssp             HHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGG
T ss_pred             hhhhhhCHHHHHHHhHHHHHHHHHHHHHhCCeEEEEecce
Confidence                              122333333 357888887654

>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17

Probab=96.92  E-value=0.0042  Score=49.09  Aligned_cols=98  Identities=12%  Similarity=0.090  Sum_probs=65.2

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHcCC------CeeecCCCchhHHHHHHHHCCCCc
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKDKVDLLKNKFGF------DEAFNYKEEPDLDAALKRYFPEGI  122 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g-~~v~~~~~~~~~~~~~~~~~g~------~~~i~~~~~~~~~~~i~~~~~~~~  122 (241)
                      .++.+||+.|  +|.|..+..++++.+ .+|++++.+++-.+.+++.+..      +.-+..... +..+.+.. .++.+
T Consensus       107 ~~~~~VLdIG--~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~-D~~~~l~~-~~~~f  182 (314)
T 2b2c_A          107 PDPKRVLIIG--GGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCG-DGFEFLKN-HKNEF  182 (314)
T ss_dssp             SSCCEEEEES--CTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECS-CHHHHHHH-CTTCE
T ss_pred             CCCCEEEEEc--CCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEC-hHHHHHHh-cCCCc
Confidence            4567999999  566778888887764 5999999999999999855531      111111122 44444443 34479


Q ss_pred             cEEEeCCC-----------chhHHHHHHhhccCCEEEEEe
Q 026217          123 NIYFENVG-----------GKMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       123 d~v~d~~g-----------~~~~~~~~~~l~~~G~~v~~g  151 (241)
                      |+|+-...           .+.+..+.+.|+++|.++.-.
T Consensus       183 D~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~  222 (314)
T 2b2c_A          183 DVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG  222 (314)
T ss_dssp             EEEEECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred             eEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence            99874331           245678889999999998753

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=96.92  E-value=0.0049  Score=49.03  Aligned_cols=74  Identities=15%  Similarity=0.244  Sum_probs=48.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH--HH---HHHHHHHcC-CCe-eecCCCchhHHHHHHHHCCCCccEEE
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK--DK---VDLLKNKFG-FDE-AFNYKEEPDLDAALKRYFPEGINIYF  126 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~--~~---~~~~~~~~g-~~~-~i~~~~~~~~~~~i~~~~~~~~d~v~  126 (241)
                      +|||+||+|.+|..+++.+...|.+|++++++.  ..   .+.+. ..+ ... ..|..+...+.+.+..   .++|+||
T Consensus         3 ~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~-~~~~~~~~~~Dl~d~~~~~~~~~~---~~~d~vi   78 (347)
T 1orr_A            3 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLS-SLGNFEFVHGDIRNKNDVTRLITK---YMPDSCF   78 (347)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHH-TTCCCEEEECCTTCHHHHHHHHHH---HCCSEEE
T ss_pred             EEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhc-cCCceEEEEcCCCCHHHHHHHHhc---cCCCEEE
Confidence            699999999999999999988999999998632  11   22233 222 211 2344443133333332   1599999


Q ss_pred             eCCCc
Q 026217          127 ENVGG  131 (241)
Q Consensus       127 d~~g~  131 (241)
                      ++++.
T Consensus        79 h~A~~   83 (347)
T 1orr_A           79 HLAGQ   83 (347)
T ss_dssp             ECCCC
T ss_pred             ECCcc
Confidence            99983

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=96.91  E-value=0.0023  Score=50.93  Aligned_cols=88  Identities=9%  Similarity=0.016  Sum_probs=59.5

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      .|.+|.|+| .|.+|...++.++..|++|++.++++.+.+... .+|....       ++.+.+.+     .|+|+-++.
T Consensus       144 ~g~tvGIIG-~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~-~~g~~~~-------~l~ell~~-----aDvV~l~~P  209 (330)
T 4e5n_A          144 DNATVGFLG-MGAIGLAMADRLQGWGATLQYHEAKALDTQTEQ-RLGLRQV-------ACSELFAS-----SDFILLALP  209 (330)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHTTTSCCEEEEECSSCCCHHHHH-HHTEEEC-------CHHHHHHH-----CSEEEECCC
T ss_pred             CCCEEEEEe-eCHHHHHHHHHHHHCCCEEEEECCCCCcHhHHH-hcCceeC-------CHHHHHhh-----CCEEEEcCC
Confidence            467999999 599999999999999999999998764445555 5564211       33333432     677777665


Q ss_pred             c--h----hHHHHHHhhccCCEEEEEee
Q 026217          131 G--K----MLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       131 ~--~----~~~~~~~~l~~~G~~v~~g~  152 (241)
                      .  +    .....+..++++..++.++.
T Consensus       210 ~t~~t~~li~~~~l~~mk~gailIN~ar  237 (330)
T 4e5n_A          210 LNADTLHLVNAELLALVRPGALLVNPCR  237 (330)
T ss_dssp             CSTTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred             CCHHHHHHhCHHHHhhCCCCcEEEECCC
Confidence            2  1    12355666777766666653

>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1

Probab=96.91  E-value=0.0022  Score=50.78  Aligned_cols=103  Identities=18%  Similarity=0.252  Sum_probs=68.3

Q ss_pred             HHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHc---CCCeeecCCCchhHHHHHHHH
Q 026217           43 FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEPDLDAALKRY  117 (241)
Q Consensus        43 l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g--~~v~~~~~~~~~~~~~~~~~---g~~~~i~~~~~~~~~~~i~~~  117 (241)
                      +.+...++++++||-.|. |. |..+..+++..+  .+|++++.+++..+.+++.+   |...+ ..... +..+...  
T Consensus        67 l~~~l~~~~~~~VLDiGc-G~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v-~~~~~-d~~~~~~--  140 (317)
T 1dl5_A           67 FMEWVGLDKGMRVLEIGG-GT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENV-IFVCG-DGYYGVP--  140 (317)
T ss_dssp             HHHHTTCCTTCEEEEECC-TT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSE-EEEES-CGGGCCG--
T ss_pred             HHHhcCCCCcCEEEEecC-Cc-hHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCe-EEEEC-Chhhccc--
Confidence            345568899999999993 44 888888888754  47999999999888887432   43321 11111 1111111  


Q ss_pred             CCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEe
Q 026217          118 FPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       118 ~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g  151 (241)
                      ..+.+|+|+....- .....+.+.|+++|+++..-
T Consensus       141 ~~~~fD~Iv~~~~~~~~~~~~~~~LkpgG~lvi~~  175 (317)
T 1dl5_A          141 EFSPYDVIFVTVGVDEVPETWFTQLKEGGRVIVPI  175 (317)
T ss_dssp             GGCCEEEEEECSBBSCCCHHHHHHEEEEEEEEEEB
T ss_pred             cCCCeEEEEEcCCHHHHHHHHHHhcCCCcEEEEEE
Confidence            12479999877663 33467788999999988753

>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}

Probab=96.90  E-value=0.0037  Score=47.98  Aligned_cols=99  Identities=11%  Similarity=0.025  Sum_probs=64.6

Q ss_pred             HhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC-eeecCCCchhHHHHHHHHCCCCcc
Q 026217           45 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEPDLDAALKRYFPEGIN  123 (241)
Q Consensus        45 ~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~-~~i~~~~~~~~~~~i~~~~~~~~d  123 (241)
                      ....+.++.+||=.|  .|.|..+..+++. |.+|++++.+++-.+.+++..... ...+..+. +.  .......+.||
T Consensus        39 ~~l~l~~g~~VLDlG--cGtG~~a~~La~~-g~~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~-~~--~~~~~~~~~fD  112 (261)
T 3iv6_A           39 FLENIVPGSTVAVIG--ASTRFLIEKALER-GASVTVFDFSQRMCDDLAEALADRCVTIDLLDI-TA--EIPKELAGHFD  112 (261)
T ss_dssp             HTTTCCTTCEEEEEC--TTCHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTSSSCCEEEECCT-TS--CCCGGGTTCCS
T ss_pred             HhcCCCCcCEEEEEe--CcchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHhccceeeeeec-cc--ccccccCCCcc
Confidence            456788999999998  5678888888765 789999999999999998554332 11111111 11  00001124799


Q ss_pred             EEEeCCC-----c----hhHHHHHHhhccCCEEEEE
Q 026217          124 IYFENVG-----G----KMLDAVLLNMRIQGRITLC  150 (241)
Q Consensus       124 ~v~d~~g-----~----~~~~~~~~~l~~~G~~v~~  150 (241)
                      +|+.+..     .    ..+..+.+++ |+|+++..
T Consensus       113 ~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS  147 (261)
T 3iv6_A          113 FVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRAS  147 (261)
T ss_dssp             EEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEE
T ss_pred             EEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEE
Confidence            9986432     1    2466677788 99998854

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=96.90  E-value=0.0046  Score=48.09  Aligned_cols=77  Identities=16%  Similarity=0.133  Sum_probs=57.5

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCC
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV  129 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~  129 (241)
                      -.|.+++|.|++..+|.-+.+++...|++|++..+.                    .. ++.+.++     .+|+|+.++
T Consensus       163 l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~--------------------t~-~L~~~~~-----~ADIVI~Av  216 (301)
T 1a4i_A          163 IAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK--------------------TA-HLDEEVN-----KGDILVVAT  216 (301)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT--------------------CS-SHHHHHT-----TCSEEEECC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECC--------------------cc-cHHHHhc-----cCCEEEECC
Confidence            478899999986679999999999999998887532                    12 4555554     399999999


Q ss_pred             CchhHHHHHHhhccCCEEEEEeee
Q 026217          130 GGKMLDAVLLNMRIQGRITLCGMI  153 (241)
Q Consensus       130 g~~~~~~~~~~l~~~G~~v~~g~~  153 (241)
                      |...+ ---+.++++..++.+|..
T Consensus       217 g~p~~-I~~~~vk~GavVIDVgi~  239 (301)
T 1a4i_A          217 GQPEM-VKGEWIKPGAIVIDCGIN  239 (301)
T ss_dssp             CCTTC-BCGGGSCTTCEEEECCCB
T ss_pred             CCccc-CCHHHcCCCcEEEEccCC
Confidence            96432 222347888888888874

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=96.90  E-value=0.005  Score=47.56  Aligned_cols=94  Identities=14%  Similarity=0.046  Sum_probs=64.0

Q ss_pred             CchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHH
Q 026217           33 GMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDA  112 (241)
Q Consensus        33 ~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~  112 (241)
                      ||........+.+...--.|.+++|.|++..+|.-+.+++...|++|++..+..                    . ++.+
T Consensus       140 PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t--------------------~-~L~~  198 (288)
T 1b0a_A          140 PCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT--------------------K-NLRH  198 (288)
T ss_dssp             CHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC--------------------S-CHHH
T ss_pred             CCcHHHHHHHHHHcCCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc--------------------h-hHHH
Confidence            333333344443322234788999999866789999999999999998886331                    2 5556


Q ss_pred             HHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeee
Q 026217          113 ALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI  153 (241)
Q Consensus       113 ~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~  153 (241)
                      .+++     +|+|+.++|...+ ---+.++++..++.+|..
T Consensus       199 ~~~~-----ADIVI~Avg~p~l-I~~~~vk~GavVIDVgi~  233 (288)
T 1b0a_A          199 HVEN-----ADLLIVAVGKPGF-IPGDWIKEGAIVIDVGIN  233 (288)
T ss_dssp             HHHH-----CSEEEECSCCTTC-BCTTTSCTTCEEEECCCE
T ss_pred             Hhcc-----CCEEEECCCCcCc-CCHHHcCCCcEEEEccCC
Confidence            6664     8999999996532 122346888888888874

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=96.89  E-value=0.0014  Score=51.44  Aligned_cols=73  Identities=14%  Similarity=0.074  Sum_probs=48.7

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHcCCCe-eecCCCchhHHHHHHHHCCCCccEEEeCC
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFENV  129 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~--g~~v~~~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~i~~~~~~~~d~v~d~~  129 (241)
                      .+|||+||+|.+|...++.+...  |.+|+++++++.+.+...   +... ..|..+...+.+.+.+.   ++|+||+++
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~---~~~~~~~D~~d~~~~~~~~~~~---~~d~vih~a   76 (312)
T 2yy7_A            3 PKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVN---SGPFEVVNALDFNQIEHLVEVH---KITDIYLMA   76 (312)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCHHHH---SSCEEECCTTCHHHHHHHHHHT---TCCEEEECC
T ss_pred             ceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccccccC---CCceEEecCCCHHHHHHHHhhc---CCCEEEECC
Confidence            46999999999999988888777  789999998765533222   2221 23444431333333321   699999998


Q ss_pred             Cc
Q 026217          130 GG  131 (241)
Q Consensus       130 g~  131 (241)
                      +.
T Consensus        77 ~~   78 (312)
T 2yy7_A           77 AL   78 (312)
T ss_dssp             CC
T ss_pred             cc
Confidence            73

>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*

Probab=96.89  E-value=0.003  Score=49.69  Aligned_cols=100  Identities=13%  Similarity=0.047  Sum_probs=65.7

Q ss_pred             CCCCcEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHcC-------CCeeecCCCchhHHHHHHHHCCC
Q 026217           49 PKQGEYVFVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKDKVDLLKNKFG-------FDEAFNYKEEPDLDAALKRYFPE  120 (241)
Q Consensus        49 ~~~~~~vlI~ga~g~~G~~avqla~~~g-~~v~~~~~~~~~~~~~~~~~g-------~~~~i~~~~~~~~~~~i~~~~~~  120 (241)
                      ..++.+||+.|  +|.|..+..+++..+ .+|++++.+++-.+.+++.+.       ...+ ..... +..+.+....++
T Consensus        93 ~~~~~~VLdiG--~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v-~~~~~-D~~~~~~~~~~~  168 (304)
T 3bwc_A           93 HPKPERVLIIG--GGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRA-TVRVG-DGLAFVRQTPDN  168 (304)
T ss_dssp             SSSCCEEEEEE--CTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTE-EEEES-CHHHHHHSSCTT
T ss_pred             CCCCCeEEEEc--CCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcE-EEEEC-cHHHHHHhccCC
Confidence            35678999999  566777888887754 599999999998888884441       1111 11111 343333322344


Q ss_pred             CccEEEeCCC-----------chhHHHHHHhhccCCEEEEEee
Q 026217          121 GINIYFENVG-----------GKMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       121 ~~d~v~d~~g-----------~~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      .+|+|+-...           .+.+..+.++|+++|.++....
T Consensus       169 ~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~  211 (304)
T 3bwc_A          169 TYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGE  211 (304)
T ss_dssp             CEEEEEEECC---------CCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             ceeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence            7998875331           2457788899999999988643

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=96.87  E-value=0.014  Score=43.41  Aligned_cols=75  Identities=7%  Similarity=-0.071  Sum_probs=54.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeee-cCCCchhHHHHHHHHCCCCccEEEeCCCch
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAF-NYKEEPDLDAALKRYFPEGINIYFENVGGK  132 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i-~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~  132 (241)
                      +|+|.|+ |.+|...++.+...|..|+++++++++.+.+.+..+...+. |..+.    +.+++..-.++|.++-+++.+
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~----~~l~~a~i~~ad~vi~~~~~d   76 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHK----EILRDAEVSKNDVVVILTPRD   76 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSH----HHHHHHTCCTTCEEEECCSCH
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCH----HHHHhcCcccCCEEEEecCCc
Confidence            4889996 99999999999999999999999999988876456654222 22222    233333223799999999975


Q ss_pred             h
Q 026217          133 M  133 (241)
Q Consensus       133 ~  133 (241)
                      .
T Consensus        77 ~   77 (218)
T 3l4b_C           77 E   77 (218)
T ss_dssp             H
T ss_pred             H
Confidence            3

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=96.87  E-value=0.0038  Score=50.06  Aligned_cols=89  Identities=21%  Similarity=0.212  Sum_probs=62.7

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      .|.+|.|+|. |.+|...++.++.+|++|++.++++...+.+. +.|...+    +  ++.+.+.     ..|+|+-++.
T Consensus       163 ~gktvGIIG~-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~-~~g~~~~----~--~l~ell~-----~aDvV~l~~P  229 (351)
T 3jtm_A          163 EGKTIGTVGA-GRIGKLLLQRLKPFGCNLLYHDRLQMAPELEK-ETGAKFV----E--DLNEMLP-----KCDVIVINMP  229 (351)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGCCEEEEECSSCCCHHHHH-HHCCEEC----S--CHHHHGG-----GCSEEEECSC
T ss_pred             cCCEEeEEEe-CHHHHHHHHHHHHCCCEEEEeCCCccCHHHHH-hCCCeEc----C--CHHHHHh-----cCCEEEECCC
Confidence            5789999995 99999999999999999999998765566666 6675322    1  3433333     3788887765


Q ss_pred             c--h----hHHHHHHhhccCCEEEEEee
Q 026217          131 G--K----MLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       131 ~--~----~~~~~~~~l~~~G~~v~~g~  152 (241)
                      .  +    .....+..|+++..++.++.
T Consensus       230 lt~~t~~li~~~~l~~mk~gailIN~aR  257 (351)
T 3jtm_A          230 LTEKTRGMFNKELIGKLKKGVLIVNNAR  257 (351)
T ss_dssp             CCTTTTTCBSHHHHHHSCTTEEEEECSC
T ss_pred             CCHHHHHhhcHHHHhcCCCCCEEEECcC
Confidence            2  1    12456667777777776653

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=96.87  E-value=0.0015  Score=52.48  Aligned_cols=74  Identities=9%  Similarity=0.147  Sum_probs=46.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCH--HHHHHHHHHc----CCC-eeecCCCchhHHHHHHHHCCCCccEE
Q 026217           54 YVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSK--DKVDLLKNKF----GFD-EAFNYKEEPDLDAALKRYFPEGINIY  125 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~-g~~v~~~~~~~--~~~~~~~~~~----g~~-~~i~~~~~~~~~~~i~~~~~~~~d~v  125 (241)
                      +|||+||+|.+|..+++.+... |.+|+++++++  .+.+.+. ++    +.. ...|..+...+...+.+   +++|+|
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~~~d~v   77 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLS-DISESNRYNFEHADICDSAEITRIFEQ---YQPDAV   77 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGT-TTTTCTTEEEEECCTTCHHHHHHHHHH---HCCSEE
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhh-hhhcCCCeEEEECCCCCHHHHHHHHhh---cCCCEE
Confidence            5899999999999988877776 78999998754  1222222 22    111 12244443123333332   269999


Q ss_pred             EeCCCc
Q 026217          126 FENVGG  131 (241)
Q Consensus       126 ~d~~g~  131 (241)
                      |++++.
T Consensus        78 ih~A~~   83 (361)
T 1kew_A           78 MHLAAE   83 (361)
T ss_dssp             EECCSC
T ss_pred             EECCCC
Confidence            999873

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.87  E-value=0.011  Score=45.89  Aligned_cols=66  Identities=17%  Similarity=0.189  Sum_probs=49.2

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCc
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG  131 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~  131 (241)
                      .+|.|+|. |.+|....+.+...|.+|++.++++++.+.+. +.|....   .   +..+.+.+     .|+|+-|+..
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~-~~g~~~~---~---~~~~~~~~-----aDvvi~~vp~   67 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELA-ALGAERA---A---TPCEVVES-----CPVTFAMLAD   67 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHH-HTTCEEC---S---SHHHHHHH-----CSEEEECCSS
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHH-HCCCeec---C---CHHHHHhc-----CCEEEEEcCC
Confidence            46899995 99999999999999999999999999888887 6665311   1   33333432     6777777763

>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*

Probab=96.86  E-value=0.0059  Score=49.22  Aligned_cols=112  Identities=16%  Similarity=0.145  Sum_probs=71.0

Q ss_pred             hhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC----HHH---------HHHHHH
Q 026217           29 TGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGS----KDK---------VDLLKN   94 (241)
Q Consensus        29 ~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~----~~~---------~~~~~~   94 (241)
                      ..+....++..+.++.....--++.+|+|.|| |..|..+++++..+|+ +|++++++    .++         ..+++ 
T Consensus       169 qGTasV~lAal~~A~~i~g~~l~~~kVVv~GA-GaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~-  246 (388)
T 1vl6_A          169 QGTAVVVSAAFLNALKLTEKKIEEVKVVVNGI-GAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIAR-  246 (388)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCTTTCEEEEECC-SHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHH-
T ss_pred             ccHHHHHHHHHHHHHHHhCCCCCCcEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHH-
Confidence            34444445555555533222236678999997 9999999999999999 89999987    433         33333 


Q ss_pred             HcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCch-hHHHHHHhhccCCEEEEEee
Q 026217           95 KFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGK-MLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus        95 ~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~  152 (241)
                      +...   . .+.. ++.+.++     ++|+++-+++.. .-+..++.|+++..++.++.
T Consensus       247 ~~~~---~-~~~~-~L~eav~-----~ADVlIG~Sap~l~t~emVk~Ma~~pIIfalSN  295 (388)
T 1vl6_A          247 ITNP---E-RLSG-DLETALE-----GADFFIGVSRGNILKPEWIKKMSRKPVIFALAN  295 (388)
T ss_dssp             TSCT---T-CCCS-CHHHHHT-----TCSEEEECSCSSCSCHHHHTTSCSSCEEEECCS
T ss_pred             hhhc---c-Cchh-hHHHHHc-----cCCEEEEeCCCCccCHHHHHhcCCCCEEEEcCC
Confidence            2221   1 1122 5666665     389999988742 34566777887665544433

>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}

Probab=96.86  E-value=0.0032  Score=48.40  Aligned_cols=102  Identities=15%  Similarity=0.224  Sum_probs=69.2

Q ss_pred             HHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC---eeecCCCchhHHHHHHH
Q 026217           43 FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEPDLDAALKR  116 (241)
Q Consensus        43 l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~~i~~~~~~~~~~~i~~  116 (241)
                      +.+...+.++.+||-.|  .|.|..+..+++..+.+|++++.++...+.+++..   |..   .++..+.. ++     .
T Consensus        53 l~~~~~~~~~~~vLDiG--cG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~-~~-----~  124 (273)
T 3bus_A           53 MIALLDVRSGDRVLDVG--CGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAM-DL-----P  124 (273)
T ss_dssp             HHHHSCCCTTCEEEEES--CTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT-SC-----C
T ss_pred             HHHhcCCCCCCEEEEeC--CCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccc-cC-----C
Confidence            44556788999999998  45588888999888999999999998888777332   321   12211111 11     0


Q ss_pred             HCCCCccEEEeCCC-------chhHHHHHHhhccCCEEEEEee
Q 026217          117 YFPEGINIYFENVG-------GKMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       117 ~~~~~~d~v~d~~g-------~~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      ..++.+|+|+..-.       ...+..+.++|+++|+++....
T Consensus       125 ~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~  167 (273)
T 3bus_A          125 FEDASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADF  167 (273)
T ss_dssp             SCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred             CCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEe
Confidence            12247999975322       1357788889999999987654

>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A

Probab=96.85  E-value=0.0022  Score=51.13  Aligned_cols=99  Identities=20%  Similarity=0.150  Sum_probs=65.7

Q ss_pred             CCCCcEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHcC-----C-CeeecCCCchhHHHHHHHHCCCC
Q 026217           49 PKQGEYVFVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKDKVDLLKNKFG-----F-DEAFNYKEEPDLDAALKRYFPEG  121 (241)
Q Consensus        49 ~~~~~~vlI~ga~g~~G~~avqla~~~g-~~v~~~~~~~~~~~~~~~~~g-----~-~~~i~~~~~~~~~~~i~~~~~~~  121 (241)
                      ..++.+||++|  +|.|..+..++++.+ .+|++++.+++-.+.+++.+.     . +.-+..... +..+.+....++.
T Consensus       118 ~~~~~~VLdIG--~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~-D~~~~l~~~~~~~  194 (334)
T 1xj5_A          118 IPNPKKVLVIG--GGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIG-DGVAFLKNAAEGS  194 (334)
T ss_dssp             SSCCCEEEEET--CSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEES-CHHHHHHTSCTTC
T ss_pred             CCCCCEEEEEC--CCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEC-CHHHHHHhccCCC
Confidence            45678999999  566777888888764 599999999998888884431     1 100111112 4444444333347


Q ss_pred             ccEEEe-CC---C-------chhHHHHHHhhccCCEEEEE
Q 026217          122 INIYFE-NV---G-------GKMLDAVLLNMRIQGRITLC  150 (241)
Q Consensus       122 ~d~v~d-~~---g-------~~~~~~~~~~l~~~G~~v~~  150 (241)
                      +|+|+- ..   +       ...+..+.+.|+++|.++.-
T Consensus       195 fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~  234 (334)
T 1xj5_A          195 YDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ  234 (334)
T ss_dssp             EEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred             ccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence            998874 32   1       13567888999999999875

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=96.85  E-value=0.0087  Score=48.01  Aligned_cols=88  Identities=19%  Similarity=0.221  Sum_probs=64.0

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      .|.+|.|+| .|.+|..+++.++..|.+|++.+++. +.+.+. ..|...+     . ++.+.+.+     .|+|+-++.
T Consensus       159 ~g~tvGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~~~-~~g~~~~-----~-~l~ell~~-----aDiV~l~~P  224 (352)
T 3gg9_A          159 KGQTLGIFG-YGKIGQLVAGYGRAFGMNVLVWGREN-SKERAR-ADGFAVA-----E-SKDALFEQ-----SDVLSVHLR  224 (352)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSHH-HHHHHH-HTTCEEC-----S-SHHHHHHH-----CSEEEECCC
T ss_pred             CCCEEEEEe-ECHHHHHHHHHHHhCCCEEEEECCCC-CHHHHH-hcCceEe-----C-CHHHHHhh-----CCEEEEecc
Confidence            467999999 49999999999999999999999765 345555 6676422     1 44444543     889988775


Q ss_pred             c-h-----hHHHHHHhhccCCEEEEEee
Q 026217          131 G-K-----MLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       131 ~-~-----~~~~~~~~l~~~G~~v~~g~  152 (241)
                      . +     .....+..++++..++.++.
T Consensus       225 lt~~t~~li~~~~l~~mk~gailIN~aR  252 (352)
T 3gg9_A          225 LNDETRSIITVADLTRMKPTALFVNTSR  252 (352)
T ss_dssp             CSTTTTTCBCHHHHTTSCTTCEEEECSC
T ss_pred             CcHHHHHhhCHHHHhhCCCCcEEEECCC
Confidence            2 1     12466778888888888873

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=96.85  E-value=0.012  Score=44.96  Aligned_cols=85  Identities=8%  Similarity=0.105  Sum_probs=60.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCchh
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKM  133 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~  133 (241)
                      +|.|+| .|.+|...+..+...|..|.+.++++++.+.+.+++|...   +.   +..+.+.     .+|+|+.|+....
T Consensus         5 ~i~iiG-~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~---~~---~~~~~~~-----~~D~Vi~~v~~~~   72 (259)
T 2ahr_A            5 KIGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPY---AM---SHQDLID-----QVDLVILGIKPQL   72 (259)
T ss_dssp             EEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCB---CS---SHHHHHH-----TCSEEEECSCGGG
T ss_pred             EEEEEC-CCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEe---eC---CHHHHHh-----cCCEEEEEeCcHh
Confidence            689999 4999999888887788899999999888887774667531   11   3333333     3899999998766


Q ss_pred             HHHHHHhhccCCEEEEE
Q 026217          134 LDAVLLNMRIQGRITLC  150 (241)
Q Consensus       134 ~~~~~~~l~~~G~~v~~  150 (241)
                      ....+..+.++..++..
T Consensus        73 ~~~v~~~l~~~~~vv~~   89 (259)
T 2ahr_A           73 FETVLKPLHFKQPIISM   89 (259)
T ss_dssp             HHHHHTTSCCCSCEEEC
T ss_pred             HHHHHHHhccCCEEEEe
Confidence            66666666655544444

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=96.84  E-value=0.013  Score=46.34  Aligned_cols=87  Identities=10%  Similarity=0.092  Sum_probs=60.5

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHcCCC-eeecCCCchhHHH-HHHHHCCCCccEEEeC
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEPDLDA-ALKRYFPEGINIYFEN  128 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~--~v~~~~~~~~~~~~~~~~~g~~-~~i~~~~~~~~~~-~i~~~~~~~~d~v~d~  128 (241)
                      .+|.|+| .|.+|...++.++..|.  +|++.++++++.+.++ +.|.. ...+     +..+ .+     ..+|+||-|
T Consensus        34 ~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~-~~G~~~~~~~-----~~~~~~~-----~~aDvVila  101 (314)
T 3ggo_A           34 QNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV-DLGIIDEGTT-----SIAKVED-----FSPDFVMLS  101 (314)
T ss_dssp             SEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH-HTTSCSEEES-----CTTGGGG-----GCCSEEEEC
T ss_pred             CEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-HCCCcchhcC-----CHHHHhh-----ccCCEEEEe
Confidence            6899999 59999999999999998  9999999999999888 88763 2211     1111 11     148888888


Q ss_pred             CCchh----HHHHHHhhccCCEEEEEe
Q 026217          129 VGGKM----LDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       129 ~g~~~----~~~~~~~l~~~G~~v~~g  151 (241)
                      +....    +..+...++++..++.++
T Consensus       102 vp~~~~~~vl~~l~~~l~~~~iv~d~~  128 (314)
T 3ggo_A          102 SPVRTFREIAKKLSYILSEDATVTDQG  128 (314)
T ss_dssp             SCGGGHHHHHHHHHHHSCTTCEEEECC
T ss_pred             CCHHHHHHHHHHHhhccCCCcEEEECC
Confidence            87543    333444455555555544

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=96.84  E-value=0.0031  Score=50.91  Aligned_cols=89  Identities=12%  Similarity=0.085  Sum_probs=61.4

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV  129 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~-v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~  129 (241)
                      .|.+|.|+| .|.+|...++.++.+|++ |++.++++.+.+.+. ++|+..+     . ++.+.+.     ..|+|+.++
T Consensus       163 ~g~tvgIIG-~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~-~~g~~~~-----~-~l~ell~-----~aDvV~l~~  229 (364)
T 2j6i_A          163 EGKTIATIG-AGRIGYRVLERLVPFNPKELLYYDYQALPKDAEE-KVGARRV-----E-NIEELVA-----QADIVTVNA  229 (364)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHH-HTTEEEC-----S-SHHHHHH-----TCSEEEECC
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHhCCCcEEEEECCCccchhHHH-hcCcEec-----C-CHHHHHh-----cCCEEEECC
Confidence            578999999 599999999999999997 999998765555555 6665321     1 3333333     378888777


Q ss_pred             Cch-----hH-HHHHHhhccCCEEEEEee
Q 026217          130 GGK-----ML-DAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       130 g~~-----~~-~~~~~~l~~~G~~v~~g~  152 (241)
                      ...     .+ ...+..|++++.++.++.
T Consensus       230 P~t~~t~~li~~~~l~~mk~ga~lIn~ar  258 (364)
T 2j6i_A          230 PLHAGTKGLINKELLSKFKKGAWLVNTAR  258 (364)
T ss_dssp             CCSTTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred             CCChHHHHHhCHHHHhhCCCCCEEEECCC
Confidence            631     12 345666777777766654

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=96.84  E-value=0.0035  Score=49.79  Aligned_cols=74  Identities=16%  Similarity=0.150  Sum_probs=47.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC----HHHHHHHHHHcCCC-e--eecCCCchhHHHHHHHHCCCCccEEE
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS----KDKVDLLKNKFGFD-E--AFNYKEEPDLDAALKRYFPEGINIYF  126 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~----~~~~~~~~~~~g~~-~--~i~~~~~~~~~~~i~~~~~~~~d~v~  126 (241)
                      +|||+||+|.+|..+++.+...|.+|+++++.    ++..+.+.+..+.. .  ..|..+...+.+.+..   .++|+||
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~~~D~vi   78 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHD---HAIDTVI   78 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHH---TTCSEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhc---cCCCEEE
Confidence            58999999999999999998899999998743    22333333112321 1  2244443123333332   1599999


Q ss_pred             eCCC
Q 026217          127 ENVG  130 (241)
Q Consensus       127 d~~g  130 (241)
                      +++|
T Consensus        79 h~A~   82 (338)
T 1udb_A           79 HFAG   82 (338)
T ss_dssp             ECCS
T ss_pred             ECCc
Confidence            9987

>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41

Probab=96.84  E-value=0.0059  Score=46.57  Aligned_cols=101  Identities=18%  Similarity=0.251  Sum_probs=67.1

Q ss_pred             HHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC--eeecCCCchhHHHHHHHH
Q 026217           43 FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD--EAFNYKEEPDLDAALKRY  117 (241)
Q Consensus        43 l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~--~~i~~~~~~~~~~~i~~~  117 (241)
                      +.....+.++.+||-.|.  |.|..+..+++.. .+|++++.+++..+.+++.+   |..  ..+..+.. ++     ..
T Consensus        29 l~~~l~~~~~~~vLDiGc--G~G~~~~~l~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~-~l-----~~   99 (260)
T 1vl5_A           29 LMQIAALKGNEEVLDVAT--GGGHVANAFAPFV-KKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAE-QM-----PF   99 (260)
T ss_dssp             HHHHHTCCSCCEEEEETC--TTCHHHHHHGGGS-SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC--CC-----CS
T ss_pred             HHHHhCCCCCCEEEEEeC--CCCHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHH-hC-----CC
Confidence            334457789999999993  4777777777664 59999999998888877332   322  11111111 11     11


Q ss_pred             CCCCccEEEeCCCc-------hhHHHHHHhhccCCEEEEEee
Q 026217          118 FPEGINIYFENVGG-------KMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       118 ~~~~~d~v~d~~g~-------~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      .++.||+|+....-       ..+..+.++|+++|+++....
T Consensus       100 ~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~  141 (260)
T 1vl5_A          100 TDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDN  141 (260)
T ss_dssp             CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             CCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence            22479999876432       467888999999999988654

>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}

Probab=96.83  E-value=0.0058  Score=48.68  Aligned_cols=45  Identities=16%  Similarity=0.164  Sum_probs=37.0

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF   98 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~   98 (241)
                      .|.+|.|+|. |.+|...++.++..|.+|++.++++++ +... ++|.
T Consensus       145 ~g~~vgIIG~-G~iG~~vA~~l~~~G~~V~~~d~~~~~-~~~~-~~g~  189 (333)
T 2d0i_A          145 YGKKVGILGM-GAIGKAIARRLIPFGVKLYYWSRHRKV-NVEK-ELKA  189 (333)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCH-HHHH-HHTE
T ss_pred             CcCEEEEEcc-CHHHHHHHHHHHHCCCEEEEECCCcch-hhhh-hcCc
Confidence            4679999995 999999999999999999999987765 4444 5553

>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*

Probab=96.83  E-value=0.027  Score=46.02  Aligned_cols=114  Identities=19%  Similarity=0.228  Sum_probs=74.5

Q ss_pred             hcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH----------HcCC-
Q 026217           31 ILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKN----------KFGF-   98 (241)
Q Consensus        31 ~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~----------~~g~-   98 (241)
                      .........+..+.....++++++|+=+|  .|+|..++++|+..|+ +|++++.++.-.+.+++          .+|. 
T Consensus       153 vYGEt~~~~i~~il~~l~l~~gd~VLDLG--CGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~  230 (438)
T 3uwp_A          153 VYGETSFDLVAQMIDEIKMTDDDLFVDLG--SGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKK  230 (438)
T ss_dssp             GGGGTHHHHHHHHHHHHCCCTTCEEEEES--CTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBC
T ss_pred             ccCCCCHHHHHHHHHhcCCCCCCEEEEeC--CCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            33344445555566677899999999888  7789999999998888 59999999875555542          2343 


Q ss_pred             -Ce--eecC--CCchhHHHHHHHHCCCCccEEEeC-C--Cc---hhHHHHHHhhccCCEEEEEee
Q 026217           99 -DE--AFNY--KEEPDLDAALKRYFPEGINIYFEN-V--GG---KMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus        99 -~~--~i~~--~~~~~~~~~i~~~~~~~~d~v~d~-~--g~---~~~~~~~~~l~~~G~~v~~g~  152 (241)
                       +.  ++.-  .+. ++.+.+.     .+|+|+-. .  ..   ..+...++.|++||+++....
T Consensus       231 ~~rVefi~GD~~~l-p~~d~~~-----~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPGGrIVssE~  289 (438)
T 3uwp_A          231 HAEYTLERGDFLSE-EWRERIA-----NTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSKP  289 (438)
T ss_dssp             CCEEEEEECCTTSH-HHHHHHH-----TCSEEEECCTTCCHHHHHHHHHHHTTSCTTCEEEESSC
T ss_pred             CCCeEEEECcccCC-ccccccC-----CccEEEEcccccCchHHHHHHHHHHcCCCCcEEEEeec
Confidence             22  2221  122 2322221     48998742 2  21   356677889999999998654

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=96.83  E-value=0.011  Score=49.15  Aligned_cols=92  Identities=12%  Similarity=0.123  Sum_probs=57.8

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe--eecCCCchhHHHHHHHHCCCCccEEEeCC
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFPEGINIYFENV  129 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~--~i~~~~~~~~~~~i~~~~~~~~d~v~d~~  129 (241)
                      +.+|+|+| +|++|...++.+...|.+|+++++++++.+.+.+.++...  ..|..+..++.+.+    . ++|+|++|+
T Consensus         3 ~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l----~-~~DvVIn~a   76 (450)
T 1ff9_A            3 TKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEV----A-KHDLVISLI   76 (450)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHH----T-TSSEEEECC
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHH----c-CCcEEEECC
Confidence            46799998 6999999998888889999999998877765553443211  12333321222222    1 599999999


Q ss_pred             Cch-hHHHHHHhhccCCEEEE
Q 026217          130 GGK-MLDAVLLNMRIQGRITL  149 (241)
Q Consensus       130 g~~-~~~~~~~~l~~~G~~v~  149 (241)
                      +.. .......++.++..++.
T Consensus        77 ~~~~~~~i~~a~l~~g~~vvd   97 (450)
T 1ff9_A           77 PYTFHATVIKSAIRQKKHVVT   97 (450)
T ss_dssp             C--CHHHHHHHHHHHTCEEEE
T ss_pred             ccccchHHHHHHHhCCCeEEE
Confidence            853 22233444555555543

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=96.82  E-value=0.0072  Score=47.88  Aligned_cols=88  Identities=10%  Similarity=0.052  Sum_probs=61.5

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV  129 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~-~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~  129 (241)
                      .|.+|.|+|. |.+|...++.++..|.+|++.++ ++++ +.+. ++|... .   +  ++.+.+.     ..|+|+.++
T Consensus       145 ~g~~vgIIG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~-~~g~~~-~---~--~l~ell~-----~aDvVil~~  210 (320)
T 1gdh_A          145 DNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRASS-SDEA-SYQATF-H---D--SLDSLLS-----VSQFFSLNA  210 (320)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCCH-HHHH-HHTCEE-C---S--SHHHHHH-----HCSEEEECC
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCcCh-hhhh-hcCcEE-c---C--CHHHHHh-----hCCEEEEec
Confidence            5679999995 99999999999999999999998 6655 3455 667632 1   1  3333343     278888877


Q ss_pred             Cc-h----hH-HHHHHhhccCCEEEEEee
Q 026217          130 GG-K----ML-DAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       130 g~-~----~~-~~~~~~l~~~G~~v~~g~  152 (241)
                      .. .    .+ ...+..+++++.++.++.
T Consensus       211 p~~~~t~~~i~~~~l~~mk~gailIn~ar  239 (320)
T 1gdh_A          211 PSTPETRYFFNKATIKSLPQGAIVVNTAR  239 (320)
T ss_dssp             CCCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             cCchHHHhhcCHHHHhhCCCCcEEEECCC
Confidence            62 1    12 345677788777777654

>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*

Probab=96.81  E-value=0.0067  Score=46.49  Aligned_cols=97  Identities=12%  Similarity=0.125  Sum_probs=66.2

Q ss_pred             CCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCC---eeecCCCchhHHHHHHHHCCCC
Q 026217           48 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFD---EAFNYKEEPDLDAALKRYFPEG  121 (241)
Q Consensus        48 ~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~---~g~~---~~i~~~~~~~~~~~i~~~~~~~  121 (241)
                      .+.++.+||-.|  .|.|..+..+++..+.+|++++.++...+.+++.   .|..   .++..+-. ++     ...++.
T Consensus        43 ~~~~~~~vLDiG--cG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~-----~~~~~~  114 (267)
T 3kkz_A           43 NLTEKSLIADIG--CGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMD-DL-----PFRNEE  114 (267)
T ss_dssp             CCCTTCEEEEET--CTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT-SC-----CCCTTC
T ss_pred             cCCCCCEEEEeC--CCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChh-hC-----CCCCCC
Confidence            478999999999  4568888888888566999999999988877733   2332   12211111 11     012247


Q ss_pred             ccEEEeCCC------chhHHHHHHhhccCCEEEEEee
Q 026217          122 INIYFENVG------GKMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       122 ~d~v~d~~g------~~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      +|+|+....      ...+..+.+.|+++|.++....
T Consensus       115 fD~i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  151 (267)
T 3kkz_A          115 LDLIWSEGAIYNIGFERGLNEWRKYLKKGGYLAVSEC  151 (267)
T ss_dssp             EEEEEESSCGGGTCHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred             EEEEEEcCCceecCHHHHHHHHHHHcCCCCEEEEEEe
Confidence            999986443      1357788889999999987654

>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*

Probab=96.81  E-value=0.002  Score=48.17  Aligned_cols=97  Identities=20%  Similarity=0.170  Sum_probs=65.8

Q ss_pred             CCCCCcEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHc---C-----CC--eeecCCCchhHHHHHH
Q 026217           48 SPKQGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKNKF---G-----FD--EAFNYKEEPDLDAALK  115 (241)
Q Consensus        48 ~~~~~~~vlI~ga~g~~G~~avqla~~~g--~~v~~~~~~~~~~~~~~~~~---g-----~~--~~i~~~~~~~~~~~i~  115 (241)
                      .++++++||-.|+ | .|..+..+++..|  .+|++++.++...+.+++.+   +     .+  .++..    +..... 
T Consensus        74 ~~~~~~~vLDiG~-G-~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~----d~~~~~-  146 (226)
T 1i1n_A           74 QLHEGAKALDVGS-G-SGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVG----DGRMGY-  146 (226)
T ss_dssp             TSCTTCEEEEETC-T-TSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEES----CGGGCC-
T ss_pred             hCCCCCEEEEEcC-C-cCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEEC----CcccCc-
Confidence            3789999999994 4 4888888888876  59999999998888776332   2     11  11111    111000 


Q ss_pred             HHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEee
Q 026217          116 RYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       116 ~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~  152 (241)
                       ...+.+|+|+....- .....+.+.|+++|+++..-.
T Consensus       147 -~~~~~fD~i~~~~~~~~~~~~~~~~LkpgG~lv~~~~  183 (226)
T 1i1n_A          147 -AEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILPVG  183 (226)
T ss_dssp             -GGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEEES
T ss_pred             -ccCCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEEe
Confidence             112379999876653 566888999999999987543

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=96.81  E-value=0.011  Score=43.40  Aligned_cols=96  Identities=15%  Similarity=0.119  Sum_probs=63.7

Q ss_pred             hcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC---------------C--eee--cCCC
Q 026217           46 VCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF---------------D--EAF--NYKE  106 (241)
Q Consensus        46 ~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~---------------~--~~i--~~~~  106 (241)
                      ...+.++.+||..|  .|.|..+..+++. |++|++++.+++-.+.++++.+.               .  ..+  |..+
T Consensus        17 ~l~~~~~~~vLD~G--CG~G~~~~~la~~-g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~   93 (203)
T 1pjz_A           17 SLNVVPGARVLVPL--CGKSQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFA   93 (203)
T ss_dssp             HHCCCTTCEEEETT--TCCSHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSS
T ss_pred             hcccCCCCEEEEeC--CCCcHhHHHHHHC-CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECcccc
Confidence            34677899999998  5567777788876 89999999999999988855432               1  111  2211


Q ss_pred             chhHHHHHHHHCCCCccEEEeCCC-----c----hhHHHHHHhhccCCEEEEEe
Q 026217          107 EPDLDAALKRYFPEGINIYFENVG-----G----KMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       107 ~~~~~~~i~~~~~~~~d~v~d~~g-----~----~~~~~~~~~l~~~G~~v~~g  151 (241)
                      . ++.+ .     +.||+|++...     .    ..+..+.+.|+|+|+++.+.
T Consensus        94 l-~~~~-~-----~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~  140 (203)
T 1pjz_A           94 L-TARD-I-----GHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLIT  140 (203)
T ss_dssp             S-THHH-H-----HSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred             C-Cccc-C-----CCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence            1 1111 0     25999997432     1    14567888999999954443

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.81  E-value=0.00046  Score=54.39  Aligned_cols=97  Identities=11%  Similarity=0.031  Sum_probs=60.7

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC-eee---c-CCCchhHHHHHHHHCCCCccE
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-EAF---N-YKEEPDLDAALKRYFPEGINI  124 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~-~~i---~-~~~~~~~~~~i~~~~~~~~d~  124 (241)
                      -.|.+++|.|++..+|..+++++...|++|+++.++..+.....++++.. +..   . .+.. ++.+.+++     +|+
T Consensus       175 l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~-~L~e~l~~-----ADI  248 (320)
T 1edz_A          175 LYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSED-LLKKCSLD-----SDV  248 (320)
T ss_dssp             TTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHH-HHHHHHHH-----CSE
T ss_pred             CCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHh-HHHHHhcc-----CCE
Confidence            36889999997446799999999999999998877633221111133321 100   0 1112 56666665     999


Q ss_pred             EEeCCCchhHHHHHHhhccCCEEEEEee
Q 026217          125 YFENVGGKMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       125 v~d~~g~~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      |+.++|...+----+.++++..++.+|.
T Consensus       249 VIsAtg~p~~vI~~e~vk~GavVIDVgi  276 (320)
T 1edz_A          249 VITGVPSENYKFPTEYIKEGAVCINFAC  276 (320)
T ss_dssp             EEECCCCTTCCBCTTTSCTTEEEEECSS
T ss_pred             EEECCCCCcceeCHHHcCCCeEEEEcCC
Confidence            9999997532111233677767777766

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=96.81  E-value=0.0056  Score=48.75  Aligned_cols=73  Identities=7%  Similarity=0.033  Sum_probs=46.1

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHH--HHHHHHHHcC---CC-eeecCCCchhHHHHHHHHCCCCccE
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKD--KVDLLKNKFG---FD-EAFNYKEEPDLDAALKRYFPEGINI  124 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~--g~~v~~~~~~~~--~~~~~~~~~g---~~-~~i~~~~~~~~~~~i~~~~~~~~d~  124 (241)
                      .+|||+||+|.+|...++.+...  |.+|+++++++.  ..+.+. .+.   .. ...|..+. +   .+.+... ++|+
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~-~---~~~~~~~-~~d~   78 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLE-AILGDRVELVVGDIADA-E---LVDKLAA-KADA   78 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTG-GGCSSSEEEEECCTTCH-H---HHHHHHT-TCSE
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHh-hhccCCeEEEECCCCCH-H---HHHHHhh-cCCE
Confidence            47999999999999998888777  889999997542  112222 221   11 12244443 2   2222222 4799


Q ss_pred             EEeCCCc
Q 026217          125 YFENVGG  131 (241)
Q Consensus       125 v~d~~g~  131 (241)
                      ||++++.
T Consensus        79 vih~A~~   85 (348)
T 1oc2_A           79 IVHYAAE   85 (348)
T ss_dssp             EEECCSC
T ss_pred             EEECCcc
Confidence            9999973

>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}

Probab=96.80  E-value=0.003  Score=47.24  Aligned_cols=95  Identities=8%  Similarity=0.052  Sum_probs=65.6

Q ss_pred             CCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHC-CCCccEEEe
Q 026217           49 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYF-PEGINIYFE  127 (241)
Q Consensus        49 ~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~-~~~~d~v~d  127 (241)
                      +.++.+||-.|  .|.|..+..+++. |.+|++++.++...+.+++......++..+-    .+.+ ... ++.||+|+.
T Consensus        46 ~~~~~~vLDiG--cG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~----~~~~-~~~~~~~fD~v~~  117 (226)
T 3m33_A           46 LTPQTRVLEAG--CGHGPDAARFGPQ-AARWAAYDFSPELLKLARANAPHADVYEWNG----KGEL-PAGLGAPFGLIVS  117 (226)
T ss_dssp             CCTTCEEEEES--CTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHCTTSEEEECCS----CSSC-CTTCCCCEEEEEE
T ss_pred             CCCCCeEEEeC--CCCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHhCCCceEEEcch----hhcc-CCcCCCCEEEEEe
Confidence            46889999998  4557777777776 8899999999999999984422122222111    0001 012 347999998


Q ss_pred             CCC-chhHHHHHHhhccCCEEEEEe
Q 026217          128 NVG-GKMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       128 ~~g-~~~~~~~~~~l~~~G~~v~~g  151 (241)
                      ... ...+..+.+.|+++|+++..+
T Consensus       118 ~~~~~~~l~~~~~~LkpgG~l~~~~  142 (226)
T 3m33_A          118 RRGPTSVILRLPELAAPDAHFLYVG  142 (226)
T ss_dssp             ESCCSGGGGGHHHHEEEEEEEEEEE
T ss_pred             CCCHHHHHHHHHHHcCCCcEEEEeC
Confidence            754 367888999999999999443

>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*

Probab=96.80  E-value=0.1  Score=41.74  Aligned_cols=88  Identities=6%  Similarity=-0.060  Sum_probs=59.3

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHc--CCEEEE-EeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCC
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLV--GCYVVG-SAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV  129 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~--g~~v~~-~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~  129 (241)
                      -+|.|+|. |.+|...+...+..  ++++++ .++++++.+.+.+++|+ .+++     ++.+.+.+   ..+|+|+-|+
T Consensus        14 ~rvgiiG~-G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~-~~~~-----~~~~ll~~---~~~D~V~i~t   83 (354)
T 3q2i_A           14 IRFALVGC-GRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGA-RGHA-----SLTDMLAQ---TDADIVILTT   83 (354)
T ss_dssp             EEEEEECC-STTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCC-EEES-----CHHHHHHH---CCCSEEEECS
T ss_pred             ceEEEEcC-cHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCC-ceeC-----CHHHHhcC---CCCCEEEECC
Confidence            47999995 99998877777766  677764 45666776666557886 3332     44444443   2599999999


Q ss_pred             Cc-hhHHHHHHhhccCCEEEEEe
Q 026217          130 GG-KMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       130 g~-~~~~~~~~~l~~~G~~v~~g  151 (241)
                      .. .+...+..++..+ +-+.+.
T Consensus        84 p~~~h~~~~~~al~~g-k~v~~E  105 (354)
T 3q2i_A           84 PSGLHPTQSIECSEAG-FHVMTE  105 (354)
T ss_dssp             CGGGHHHHHHHHHHTT-CEEEEC
T ss_pred             CcHHHHHHHHHHHHCC-CCEEEe
Confidence            86 4666667766664 445553

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=96.80  E-value=0.0037  Score=47.64  Aligned_cols=34  Identities=15%  Similarity=0.174  Sum_probs=29.6

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCH
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSK   86 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~   86 (241)
                      +.+|+|.|+ |++|..+++.+...|+ +++++++..
T Consensus        31 ~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~   65 (249)
T 1jw9_B           31 DSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDT   65 (249)
T ss_dssp             HCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             CCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence            468999996 9999999999999998 888888765

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=96.80  E-value=0.0013  Score=52.82  Aligned_cols=74  Identities=15%  Similarity=0.220  Sum_probs=46.3

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHc-CCCeeecCCCchhHHHHHHHHCC----CCccE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKDKVDLLKNKF-GFDEAFNYKEEPDLDAALKRYFP----EGINI  124 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g-~~v~~~~~~~~~~~~~~~~~-g~~~~i~~~~~~~~~~~i~~~~~----~~~d~  124 (241)
                      ++.+|||+||+|.+|..+++.+...| .+|++++++++... .. .+ +.....|..+.    +.+.....    +++|+
T Consensus        45 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~-~~~~~~~~~d~~~~----~~~~~~~~~~~~~~~d~  118 (357)
T 2x6t_A           45 EGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-FV-NLVDLNIADYMDKE----DFLIQIMAGEEFGDVEA  118 (357)
T ss_dssp             ---CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG-GG-GTTTSCCSEEEEHH----HHHHHHHTTCCCSSCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch-hh-cccCceEeeecCcH----HHHHHHHhhcccCCCCE
Confidence            34679999999999999999998899 89999997754321 11 22 11111222222    22333222    26999


Q ss_pred             EEeCCC
Q 026217          125 YFENVG  130 (241)
Q Consensus       125 v~d~~g  130 (241)
                      ||++++
T Consensus       119 Vih~A~  124 (357)
T 2x6t_A          119 IFHEGA  124 (357)
T ss_dssp             EEECCS
T ss_pred             EEECCc
Confidence            999987

>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}

Probab=96.79  E-value=0.13  Score=40.61  Aligned_cols=86  Identities=13%  Similarity=0.164  Sum_probs=58.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEE-EeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCc
Q 026217           54 YVFVSAASGAVGQLVGQFAKLV-GCYVVG-SAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG  131 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~-g~~v~~-~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~  131 (241)
                      +|.|+|. |.+|...+..++.. ++++++ .++++++.+.+.+++|..    +.   ++.+.+.+   ..+|+|+.|+..
T Consensus         5 ~vgiiG~-G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~----~~---~~~~~l~~---~~~D~V~i~tp~   73 (331)
T 4hkt_A            5 RFGLLGA-GRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCE----VR---TIDAIEAA---ADIDAVVICTPT   73 (331)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCE----EC---CHHHHHHC---TTCCEEEECSCG
T ss_pred             EEEEECC-CHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCC----cC---CHHHHhcC---CCCCEEEEeCCc
Confidence            6899995 99999888777765 778775 556666666665477764    22   44444432   269999999986


Q ss_pred             -hhHHHHHHhhccCCEEEEEe
Q 026217          132 -KMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       132 -~~~~~~~~~l~~~G~~v~~g  151 (241)
                       .+...+..++..+ +-+.+.
T Consensus        74 ~~h~~~~~~al~~g-k~v~~E   93 (331)
T 4hkt_A           74 DTHADLIERFARAG-KAIFCE   93 (331)
T ss_dssp             GGHHHHHHHHHHTT-CEEEEC
T ss_pred             hhHHHHHHHHHHcC-CcEEEe
Confidence             5666666666664 445553

>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}

Probab=96.79  E-value=0.068  Score=42.35  Aligned_cols=88  Identities=11%  Similarity=0.046  Sum_probs=58.5

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHc-CCEEEEE-eCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLV-GCYVVGS-AGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~-g~~v~~~-~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      -+|.|+|. |.+|...+..++.. +++++++ ++++++.+.+.+++|...+++     ++.+.+.+   ..+|+|+.|+.
T Consensus         6 ~~igiiG~-G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~-----~~~~ll~~---~~~D~V~i~tp   76 (330)
T 3e9m_A            6 IRYGIMST-AQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELAIPVAYG-----SYEELCKD---ETIDIIYIPTY   76 (330)
T ss_dssp             EEEEECSC-CTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTTCCCCBS-----SHHHHHHC---TTCSEEEECCC
T ss_pred             EEEEEECc-hHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcCCCceeC-----CHHHHhcC---CCCCEEEEcCC
Confidence            37899995 99999887777775 6777755 455566665554787644332     44444432   26999999998


Q ss_pred             c-hhHHHHHHhhccCCEEEEE
Q 026217          131 G-KMLDAVLLNMRIQGRITLC  150 (241)
Q Consensus       131 ~-~~~~~~~~~l~~~G~~v~~  150 (241)
                      . .+...+..++..|-. +.+
T Consensus        77 ~~~h~~~~~~al~~gk~-vl~   96 (330)
T 3e9m_A           77 NQGHYSAAKLALSQGKP-VLL   96 (330)
T ss_dssp             GGGHHHHHHHHHHTTCC-EEE
T ss_pred             CHHHHHHHHHHHHCCCe-EEE
Confidence            6 566666777766543 444

>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7

Probab=96.79  E-value=0.0011  Score=49.63  Aligned_cols=96  Identities=15%  Similarity=0.137  Sum_probs=65.5

Q ss_pred             CCCCCcEEEEEcCCchHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHc---C-----CC--eeecCCCchhH
Q 026217           48 SPKQGEYVFVSAASGAVGQLVGQFAKLVG-------CYVVGSAGSKDKVDLLKNKF---G-----FD--EAFNYKEEPDL  110 (241)
Q Consensus        48 ~~~~~~~vlI~ga~g~~G~~avqla~~~g-------~~v~~~~~~~~~~~~~~~~~---g-----~~--~~i~~~~~~~~  110 (241)
                      .++++++||-.|+ | .|..+..+++..+       .+|++++.+++..+.+++.+   +     .+  .++..    +.
T Consensus        81 ~~~~~~~VLdiG~-G-~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~----d~  154 (227)
T 1r18_A           81 HLKPGARILDVGS-G-SGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEG----DG  154 (227)
T ss_dssp             TCCTTCEEEEESC-T-TSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEES----CG
T ss_pred             hCCCCCEEEEECC-C-ccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEEC----Cc
Confidence            5789999999993 4 4888888888776       49999999998887776332   1     11  12211    11


Q ss_pred             HHHHHHHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEe
Q 026217          111 DAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       111 ~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g  151 (241)
                      .+.+..  .+.+|+|+..... .....+.+.|+++|+++..-
T Consensus       155 ~~~~~~--~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lvi~~  194 (227)
T 1r18_A          155 RKGYPP--NAPYNAIHVGAAAPDTPTELINQLASGGRLIVPV  194 (227)
T ss_dssp             GGCCGG--GCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             ccCCCc--CCCccEEEECCchHHHHHHHHHHhcCCCEEEEEE
Confidence            111111  1379999877664 55688899999999988753

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=96.78  E-value=0.003  Score=47.25  Aligned_cols=75  Identities=16%  Similarity=0.175  Sum_probs=50.9

Q ss_pred             CCcEEEEEcC----------------CchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHH
Q 026217           51 QGEYVFVSAA----------------SGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL  114 (241)
Q Consensus        51 ~~~~vlI~ga----------------~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i  114 (241)
                      .|.+|||+||                +|++|.+.++.+...|++|+.+.++. ..+.   ..|. .+++..+..++.+.+
T Consensus         7 ~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~-~l~~---~~g~-~~~dv~~~~~~~~~v   81 (226)
T 1u7z_A            7 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPV-SLPT---PPFV-KRVDVMTALEMEAAV   81 (226)
T ss_dssp             TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSC-CCCC---CTTE-EEEECCSHHHHHHHH
T ss_pred             CCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCc-cccc---CCCC-eEEccCcHHHHHHHH
Confidence            5789999999                58999999999999999999987643 1110   1122 244544422444444


Q ss_pred             HHHCCCCccEEEeCCCc
Q 026217          115 KRYFPEGINIYFENVGG  131 (241)
Q Consensus       115 ~~~~~~~~d~v~d~~g~  131 (241)
                      .+.. +++|+++++++-
T Consensus        82 ~~~~-~~~Dili~~Aav   97 (226)
T 1u7z_A           82 NASV-QQQNIFIGCAAV   97 (226)
T ss_dssp             HHHG-GGCSEEEECCBC
T ss_pred             HHhc-CCCCEEEECCcc
Confidence            4433 369999999984

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=96.78  E-value=0.0088  Score=46.30  Aligned_cols=87  Identities=9%  Similarity=0.106  Sum_probs=58.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHcCCCe-eecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~--~v~~~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      +|.|+|+ |.+|.+.++.++..|.  +|++.++++++.+.++ +.|... ...     +..+.+.    ..+|+|+.|+.
T Consensus         3 ~I~iIG~-G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~-~~g~~~~~~~-----~~~~~~~----~~aDvVilavp   71 (281)
T 2g5c_A            3 NVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV-DLGIIDEGTT-----SIAKVED----FSPDFVMLSSP   71 (281)
T ss_dssp             EEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH-HTTSCSEEES-----CGGGGGG----TCCSEEEECSC
T ss_pred             EEEEEec-CHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHH-HCCCcccccC-----CHHHHhc----CCCCEEEEcCC
Confidence            6899995 9999999999988888  9999999999888888 777631 111     1111121    04899999988


Q ss_pred             chhH----HHHHHhhccCCEEEEEe
Q 026217          131 GKML----DAVLLNMRIQGRITLCG  151 (241)
Q Consensus       131 ~~~~----~~~~~~l~~~G~~v~~g  151 (241)
                      ....    ......++++..++.++
T Consensus        72 ~~~~~~v~~~l~~~l~~~~iv~~~~   96 (281)
T 2g5c_A           72 VRTFREIAKKLSYILSEDATVTDQG   96 (281)
T ss_dssp             HHHHHHHHHHHHHHSCTTCEEEECC
T ss_pred             HHHHHHHHHHHHhhCCCCcEEEECC
Confidence            5433    33334455555555543

>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*

Probab=96.78  E-value=0.0031  Score=49.62  Aligned_cols=99  Identities=12%  Similarity=0.133  Sum_probs=64.8

Q ss_pred             CCCCcEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHcCC------CeeecCCCchhHHHHHHHHCCCC
Q 026217           49 PKQGEYVFVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKDKVDLLKNKFGF------DEAFNYKEEPDLDAALKRYFPEG  121 (241)
Q Consensus        49 ~~~~~~vlI~ga~g~~G~~avqla~~~g-~~v~~~~~~~~~~~~~~~~~g~------~~~i~~~~~~~~~~~i~~~~~~~  121 (241)
                      ..++.+||++|  +|.|..+..++++.+ .+|++++.+++-.+.+++.+..      +.-+..... +..+.+.. .++.
T Consensus        93 ~~~~~~VLdiG--~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~-Da~~~l~~-~~~~  168 (304)
T 2o07_A           93 HPNPRKVLIIG--GGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVG-DGFEFMKQ-NQDA  168 (304)
T ss_dssp             SSSCCEEEEEE--CTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEES-CHHHHHHT-CSSC
T ss_pred             CCCCCEEEEEC--CCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEEC-cHHHHHhh-CCCC
Confidence            35668999999  566777888887764 5999999999988888844321      100111111 33333332 3347


Q ss_pred             ccEEE-eCCC----------chhHHHHHHhhccCCEEEEEe
Q 026217          122 INIYF-ENVG----------GKMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       122 ~d~v~-d~~g----------~~~~~~~~~~l~~~G~~v~~g  151 (241)
                      +|+|+ |...          .+.+..+.++|+++|.++.-.
T Consensus       169 fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~  209 (304)
T 2o07_A          169 FDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG  209 (304)
T ss_dssp             EEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred             ceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence            99887 3332          135788899999999998754

>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}

Probab=96.78  E-value=0.0052  Score=46.21  Aligned_cols=101  Identities=13%  Similarity=0.142  Sum_probs=66.6

Q ss_pred             HHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCC--eeecCCCchhHHHHHHHHC
Q 026217           42 GFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFD--EAFNYKEEPDLDAALKRYF  118 (241)
Q Consensus        42 ~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~g~~--~~i~~~~~~~~~~~i~~~~  118 (241)
                      .+.......++.+||-.|  .|.|..+..+++. |. +|++++.++...+.+++.....  .++..    +..+ + ...
T Consensus        34 ~l~~~~~~~~~~~vLdiG--~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~----d~~~-~-~~~  104 (243)
T 3bkw_A           34 ALRAMLPEVGGLRIVDLG--CGFGWFCRWAHEH-GASYVLGLDLSEKMLARARAAGPDTGITYERA----DLDK-L-HLP  104 (243)
T ss_dssp             HHHHHSCCCTTCEEEEET--CTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSCSSSEEEEEC----CGGG-C-CCC
T ss_pred             HHHHhccccCCCEEEEEc--CcCCHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHhcccCCceEEEc----Chhh-c-cCC
Confidence            444555667889999998  3457777777766 77 9999999999999998433221  11111    1111 0 012


Q ss_pred             CCCccEEEeCCC-------chhHHHHHHhhccCCEEEEEe
Q 026217          119 PEGINIYFENVG-------GKMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       119 ~~~~d~v~d~~g-------~~~~~~~~~~l~~~G~~v~~g  151 (241)
                      ++.+|+|+....       ...+..+.++|+++|+++...
T Consensus       105 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~  144 (243)
T 3bkw_A          105 QDSFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFST  144 (243)
T ss_dssp             TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCCceEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEe
Confidence            347999986543       135678888999999998764

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=96.76  E-value=0.0049  Score=50.14  Aligned_cols=89  Identities=12%  Similarity=0.004  Sum_probs=59.0

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      .|.+|.|+| .|.+|...++.++.+|.+|++.+++....+... ++|+...    .  ++.+.+.     ..|+|+.++.
T Consensus       190 ~gktvGIIG-lG~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~-~~G~~~~----~--~l~ell~-----~aDvV~l~~P  256 (393)
T 2nac_A          190 EAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEK-ELNLTWH----A--TREDMYP-----VCDVVTLNCP  256 (393)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHH-HHTCEEC----S--SHHHHGG-----GCSEEEECSC
T ss_pred             CCCEEEEEe-ECHHHHHHHHHHHhCCCEEEEEcCCccchhhHh-hcCceec----C--CHHHHHh-----cCCEEEEecC
Confidence            578999999 499999999999999999999998765555555 6665321    1  2322222     3677777665


Q ss_pred             c--h---hH-HHHHHhhccCCEEEEEee
Q 026217          131 G--K---ML-DAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       131 ~--~---~~-~~~~~~l~~~G~~v~~g~  152 (241)
                      .  +   .+ ...+..|+++..++.++.
T Consensus       257 lt~~t~~li~~~~l~~mk~gailIN~aR  284 (393)
T 2nac_A          257 LHPETEHMINDETLKLFKRGAYIVNTAR  284 (393)
T ss_dssp             CCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             CchHHHHHhhHHHHhhCCCCCEEEECCC
Confidence            2  1   12 345566666666666553

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.75  E-value=0.0014  Score=50.12  Aligned_cols=67  Identities=18%  Similarity=0.205  Sum_probs=49.3

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV  129 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~  129 (241)
                      .+ +++|+|+ |++|.+++..+...|+ +|+++.|++++.+.+.++++.   ...  . ++.+.+.     .+|+|++|+
T Consensus       108 ~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~---~~~--~-~~~~~~~-----~aDiVInat  174 (253)
T 3u62_A          108 KE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKI---FSL--D-QLDEVVK-----KAKSLFNTT  174 (253)
T ss_dssp             CS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEE---EEG--G-GHHHHHH-----TCSEEEECS
T ss_pred             CC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHccc---CCH--H-HHHhhhc-----CCCEEEECC
Confidence            45 8999996 9999999999999999 999999998877655423331   122  1 3433343     499999998


Q ss_pred             C
Q 026217          130 G  130 (241)
Q Consensus       130 g  130 (241)
                      .
T Consensus       175 p  175 (253)
T 3u62_A          175 S  175 (253)
T ss_dssp             S
T ss_pred             C
Confidence            6

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=96.74  E-value=0.013  Score=45.19  Aligned_cols=90  Identities=12%  Similarity=0.008  Sum_probs=60.5

Q ss_pred             CCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEE
Q 026217           48 SPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYF  126 (241)
Q Consensus        48 ~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~  126 (241)
                      +...+.+++|.|+ |++|.+++..+...|+ +|+++.|+.++.+.+.++++.+  ++. .. .    +     ..+|+|+
T Consensus       115 ~~~~~~~vlvlGa-Ggaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~--~~~-~~-~----~-----~~~DivI  180 (271)
T 1npy_A          115 HLNKNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYA--YIN-SL-E----N-----QQADILV  180 (271)
T ss_dssp             TCCTTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCE--EES-CC-T----T-----CCCSEEE
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCc--cch-hh-h----c-----ccCCEEE
Confidence            3446678999996 9999999988889998 8999999988766665477652  111 11 0    1     2599999


Q ss_pred             eCCCchhH--------HHHHHhhccCCEEEEEe
Q 026217          127 ENVGGKML--------DAVLLNMRIQGRITLCG  151 (241)
Q Consensus       127 d~~g~~~~--------~~~~~~l~~~G~~v~~g  151 (241)
                      +|++....        ......+.++..++.+.
T Consensus       181 naTp~gm~~~~~~~~~~~~~~~l~~~~~v~Dlv  213 (271)
T 1npy_A          181 NVTSIGMKGGKEEMDLAFPKAFIDNASVAFDVV  213 (271)
T ss_dssp             ECSSTTCTTSTTTTSCSSCHHHHHHCSEEEECC
T ss_pred             ECCCCCccCccccCCCCCCHHHcCCCCEEEEee
Confidence            99985321        11123455666565553

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.73  E-value=0.0048  Score=47.85  Aligned_cols=86  Identities=12%  Similarity=0.031  Sum_probs=58.5

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV  129 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~  129 (241)
                      .+.+++|+|+ |++|.+++..+...|+ +|+++.|+.++.+.+.++++   .+      ++. .+.+ .  .+|+|++|+
T Consensus       121 ~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~~---~~------~~~-~l~~-l--~~DivInaT  186 (282)
T 3fbt_A          121 KNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEFK---VI------SYD-ELSN-L--KGDVIINCT  186 (282)
T ss_dssp             TTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTSE---EE------EHH-HHTT-C--CCSEEEECS
T ss_pred             cCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhcC---cc------cHH-HHHh-c--cCCEEEECC
Confidence            5789999996 9999999999999999 99999999888766653332   22      221 2222 2  599999999


Q ss_pred             Cchh------HHHHHHhhccCCEEEEE
Q 026217          130 GGKM------LDAVLLNMRIQGRITLC  150 (241)
Q Consensus       130 g~~~------~~~~~~~l~~~G~~v~~  150 (241)
                      +...      .......++++..++.+
T Consensus       187 p~Gm~~~~~~~pi~~~~l~~~~~v~Dl  213 (282)
T 3fbt_A          187 PKGMYPKEGESPVDKEVVAKFSSAVDL  213 (282)
T ss_dssp             STTSTTSTTCCSSCHHHHTTCSEEEES
T ss_pred             ccCccCCCccCCCCHHHcCCCCEEEEE
Confidence            6321      11233456666655554

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=96.72  E-value=0.0091  Score=48.48  Aligned_cols=35  Identities=17%  Similarity=0.033  Sum_probs=30.9

Q ss_pred             cEEEEEcCCchHHHHHHHHHH-HcCCEEEEEeCCHH
Q 026217           53 EYVFVSAASGAVGQLVGQFAK-LVGCYVVGSAGSKD   87 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~-~~g~~v~~~~~~~~   87 (241)
                      -+|||+||+|.+|..+++.+. ..|.+|++++++..
T Consensus         3 m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~   38 (397)
T 1gy8_A            3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVG   38 (397)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCc
Confidence            479999999999999998888 89999999987644

>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}

Probab=96.72  E-value=0.0081  Score=44.44  Aligned_cols=97  Identities=16%  Similarity=0.111  Sum_probs=64.8

Q ss_pred             HhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC-CCeeecCCCchhHHHHHHHHCCCCcc
Q 026217           45 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFG-FDEAFNYKEEPDLDAALKRYFPEGIN  123 (241)
Q Consensus        45 ~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g-~~~~i~~~~~~~~~~~i~~~~~~~~d  123 (241)
                      +.....++.+||-.|  .|.|..+..+++. +.+|++++.+++..+.+++.+. ...++..+.. ++.     . .+.+|
T Consensus        39 ~~~~~~~~~~vLDiG--cG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~-~~~-----~-~~~fD  108 (220)
T 3hnr_A           39 EDVVNKSFGNVLEFG--VGTGNLTNKLLLA-GRTVYGIEPSREMRMIAKEKLPKEFSITEGDFL-SFE-----V-PTSID  108 (220)
T ss_dssp             HHHHHTCCSEEEEEC--CTTSHHHHHHHHT-TCEEEEECSCHHHHHHHHHHSCTTCCEESCCSS-SCC-----C-CSCCS
T ss_pred             HHhhccCCCeEEEeC--CCCCHHHHHHHhC-CCeEEEEeCCHHHHHHHHHhCCCceEEEeCChh-hcC-----C-CCCeE
Confidence            333445889999998  4557777777766 8899999999999999985544 1112211111 110     1 14699


Q ss_pred             EEEeCCC-----c--h--hHHHHHHhhccCCEEEEEe
Q 026217          124 IYFENVG-----G--K--MLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       124 ~v~d~~g-----~--~--~~~~~~~~l~~~G~~v~~g  151 (241)
                      +|+....     .  .  .+..+.+.|+++|.++...
T Consensus       109 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~  145 (220)
T 3hnr_A          109 TIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFAD  145 (220)
T ss_dssp             EEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             EEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEe
Confidence            9986542     1  1  5678888999999998864

>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*

Probab=96.72  E-value=0.0087  Score=45.67  Aligned_cols=100  Identities=15%  Similarity=0.080  Sum_probs=64.0

Q ss_pred             CCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC-------------------eeecCCCch
Q 026217           48 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-------------------EAFNYKEEP  108 (241)
Q Consensus        48 ~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~-------------------~~i~~~~~~  108 (241)
                      ...++.+||..|  .|.|..+..+++. |++|++++.++.-.+.++++.+..                   .-+..... 
T Consensus        65 ~~~~~~~vLD~G--CG~G~~~~~La~~-G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-  140 (252)
T 2gb4_A           65 KGQSGLRVFFPL--CGKAIEMKWFADR-GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCC-  140 (252)
T ss_dssp             TTCCSCEEEETT--CTTCTHHHHHHHT-TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEES-
T ss_pred             cCCCCCeEEEeC--CCCcHHHHHHHHC-CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEEC-
Confidence            346888999998  4567777777765 899999999999999887455320                   00111011 


Q ss_pred             hHHHHHHHHCCCCccEEEeCCC-----c----hhHHHHHHhhccCCEEEEEee
Q 026217          109 DLDAALKRYFPEGINIYFENVG-----G----KMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       109 ~~~~~i~~~~~~~~d~v~d~~g-----~----~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      ++.+ +.....+.||+|++...     .    ..+..+.+.|+|+|+++.+..
T Consensus       141 D~~~-l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~  192 (252)
T 2gb4_A          141 SIFD-LPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVL  192 (252)
T ss_dssp             CTTT-GGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             cccc-CCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEE
Confidence            1111 11111147999997532     1    246678889999999975543

>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*

Probab=96.72  E-value=0.0049  Score=47.92  Aligned_cols=99  Identities=15%  Similarity=0.177  Sum_probs=65.0

Q ss_pred             CCCCcEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHcCC------CeeecCCCchhHHHHHHHHCCCC
Q 026217           49 PKQGEYVFVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKDKVDLLKNKFGF------DEAFNYKEEPDLDAALKRYFPEG  121 (241)
Q Consensus        49 ~~~~~~vlI~ga~g~~G~~avqla~~~g-~~v~~~~~~~~~~~~~~~~~g~------~~~i~~~~~~~~~~~i~~~~~~~  121 (241)
                      ..++.+||+.|  +|.|..+..++++.+ .+|++++.++.-.+.+++.+..      +.-+..... +..+.+... ++.
T Consensus        76 ~~~~~~VLdiG--~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~-D~~~~l~~~-~~~  151 (283)
T 2i7c_A           76 SKEPKNVLVVG--GGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIE-DASKFLENV-TNT  151 (283)
T ss_dssp             SSSCCEEEEEE--CTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEES-CHHHHHHHC-CSC
T ss_pred             CCCCCeEEEEe--CCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEEC-ChHHHHHhC-CCC
Confidence            34668999999  566777777777764 5999999999999999855532      100111111 343334332 457


Q ss_pred             ccEEEe-CC---C-------chhHHHHHHhhccCCEEEEEe
Q 026217          122 INIYFE-NV---G-------GKMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       122 ~d~v~d-~~---g-------~~~~~~~~~~l~~~G~~v~~g  151 (241)
                      +|+|+- ..   +       .+.+..+.++|+++|.++...
T Consensus       152 fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~  192 (283)
T 2i7c_A          152 YDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC  192 (283)
T ss_dssp             EEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred             ceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence            998874 22   1       145678888999999998764

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=96.71  E-value=0.0073  Score=57.97  Aligned_cols=80  Identities=20%  Similarity=0.245  Sum_probs=52.0

Q ss_pred             CCcEEEEEcCCch-HHHHHHHHHHHcCCEEEEE-eCCHHHHHHHH----HHc---CCC---eeecCCCchhHHHHHHHHC
Q 026217           51 QGEYVFVSAASGA-VGQLVGQFAKLVGCYVVGS-AGSKDKVDLLK----NKF---GFD---EAFNYKEEPDLDAALKRYF  118 (241)
Q Consensus        51 ~~~~vlI~ga~g~-~G~~avqla~~~g~~v~~~-~~~~~~~~~~~----~~~---g~~---~~i~~~~~~~~~~~i~~~~  118 (241)
                      .|.+++|+||+++ +|.++++.+...|++|+++ .+++++.+.+.    +++   |..   ...|..+..++...+....
T Consensus       674 ~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i~  753 (1887)
T 2uv8_A          674 KDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIY  753 (1887)
T ss_dssp             TTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHHH
Confidence            5789999999998 9999999999999999998 45555443322    133   322   1234444323333333221


Q ss_pred             -------CC-CccEEEeCCC
Q 026217          119 -------PE-GINIYFENVG  130 (241)
Q Consensus       119 -------~~-~~d~v~d~~g  130 (241)
                             -| .+|++|+++|
T Consensus       754 ~~~~~~G~G~~LDiLVNNAG  773 (1887)
T 2uv8_A          754 DTEKNGGLGWDLDAIIPFAA  773 (1887)
T ss_dssp             SCTTTTSCCCCCSEEEECCC
T ss_pred             HhccccccCCCCeEEEECCC
Confidence                   13 6999999987

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	241
d1vj1a2	187	c.2.1.1 (A:125-311) Putative zinc-binding alcohol	8e-37
d1v3va2	182	c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehyd	1e-32
d1gu7a2	189	c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yea	2e-20
d1qora2	179	c.2.1.1 (A:113-291) Quinone oxidoreductase {Escher	1e-17
d1pqwa_	183	c.2.1.1 (A:) Putative enoyl reductase domain of po	1e-17
d2fzwa2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	1e-16
d1tt7a2	167	c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bac	2e-16
d2jhfa2	176	c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (	3e-16
d1f8fa2	174	c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {	2e-15
d1o89a2	177	c.2.1.1 (A:116-292) Hypothetical protein YhdH {Esc	2e-15
d1cdoa2	175	c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga	3e-14
d1vj0a2	182	c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T	4e-14
d1xa0a2	176	c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Ba	2e-12
d1h2ba2	172	c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeo	7e-12
d1yb5a2	174	c.2.1.1 (A:121-294) Quinone oxidoreductase {Human	1e-11
d1o8ca2	77	c.2.1.1 (A:116-192) Hypothetical protein YhdH {Esc	2e-10
d1p0fa2	174	c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog	3e-10
d1vj1a1	166	b.35.1.2 (A:-1-124,A:312-351) Putative zinc-bindin	4e-09
d1jqba2	174	c.2.1.1 (A:1140-1313) Bacterial secondary alcohol	7e-09
d1iz0a2	171	c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus	8e-08
d1kola2	195	c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Ps	1e-07
d1v3va1	147	b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hyd	1e-06
d1e3ia2	174	c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (	2e-06
d1d1ta2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	7e-06

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Length = 187

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  126 bits (316), Expect = 8e-37
 Identities = 58/186 (31%), Positives = 84/186 (45%), Gaps = 6/186 (3%)

Query: 25  LSYYTGILGMPGMTAYAGFFEVCSPKQG--EYVFVSAASGAVGQLVGQFAKLVGCYVVGS 82
           LSY+ G +GMPG+T+  G  E      G  + + VS A+GA G L GQ   L+GC  V  
Sbjct: 2   LSYFLGAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVG 61

Query: 83  AGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMR 142
                +  L        +A    +  ++   L+   P G+++YF+NVGG + + V+  M 
Sbjct: 62  ICGTQEKCLFLTSELGFDAAVNYKTGNVAEQLREACPGGVDVYFDNVGGDISNTVISQMN 121

Query: 143 IQGRITLCGMISQYNND----KPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIP 198
               I LCG ISQYN D     P           + I  E F V +Y   +   +  +  
Sbjct: 122 ENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKERNITRERFTVLNYKDKFEPGILQLSQ 181

Query: 199 RIKEGK 204
             KEGK
Sbjct: 182 WFKEGK 187

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

 Score =  115 bits (287), Expect = 1e-32
 Identities = 83/183 (45%), Positives = 113/183 (61%), Gaps = 3/183 (1%)

Query: 23  MPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGS 82
           +PLS   G +GMPG+TAY G  EVC  K GE V VSAA+GAVG +VGQ AKL GC VVG+
Sbjct: 1   LPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGA 60

Query: 83  AGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMR 142
           AGS +K+  LK        FNYK    L+ ALK+  P+G + YF+NVGG+ L+ VL  M+
Sbjct: 61  AGSDEKIAYLKQIGFDAA-FNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMK 119

Query: 143 IQGRITLCGMISQYNND-KPEGVHNLTCLISKRIRMEGFLVPDYF-HLYPKFLEMMIPRI 200
             G+I +CG IS YN   +     +   +I K++R+EGF+V  +   +  K L  ++  +
Sbjct: 120 DFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALRDLMKWV 179

Query: 201 KEG 203
            EG
Sbjct: 180 LEG 182

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 189

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 83.5 bits (205), Expect = 2e-20
 Identities = 31/186 (16%), Positives = 57/186 (30%), Gaps = 18/186 (9%)

Query: 32  LGMPGMTAYAGFFEVCSPKQGEYVFV-SAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVD 90
           + +  +TAY           G+  F+ +  + AVG+   Q  KL+    +     +  +D
Sbjct: 9   ISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLD 68

Query: 91  LL---KNKFGFDEAFNYKEE-----PDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMR 142
            +     + G  +     +              +       +    VGGK    +   + 
Sbjct: 69  EVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLN 128

Query: 143 IQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKF----LEMMIP 198
             G +   G +S      P         I K     GF V +      +     L  +I 
Sbjct: 129 NNGLMLTYGGMSFQPVTIPTS-----LYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIA 183

Query: 199 RIKEGK 204
             +EGK
Sbjct: 184 WYEEGK 189

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 179

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

 Score = 75.8 bits (185), Expect = 1e-17
 Identities = 36/173 (20%), Positives = 70/173 (40%), Gaps = 4/173 (2%)

Query: 32  LGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDL 91
             + G+T Y    +    K  E     AA+G VG +  Q+AK +G  ++G+ G+  K   
Sbjct: 9   SFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQS 68

Query: 92  LKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCG 151
              K G  +  NY+EE  ++   +    + + + +++VG    +  L  ++ +G +   G
Sbjct: 69  AL-KAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFG 127

Query: 152 MISQYNNDKPEGVHNL-TCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEG 203
             S        G+ N    L   R  ++G++         +    +   I  G
Sbjct: 128 NSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTR--EELTEASNELFSLIASG 178

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 183

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 75.8 bits (185), Expect = 1e-17
 Identities = 31/174 (17%), Positives = 67/174 (38%), Gaps = 2/174 (1%)

Query: 32  LGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDL 91
            G+  +TA+    EV     GE V + +A+G VG      AK +    + +    D    
Sbjct: 6   FGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAK-MIGARIYTTAGSDAKRE 64

Query: 92  LKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCG 151
           + ++ G +   + +     D  L+     G+++   ++ G+ +   +  +   GR    G
Sbjct: 65  MLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELG 124

Query: 152 MISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKI 205
               Y +    G+  L    S  +      +      Y + L+ ++  + +GK+
Sbjct: 125 KKDVYADASL-GLAALAKSASFSVVDLDLNLKLQPARYRQLLQHILQHVADGKL 177

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 73.1 bits (178), Expect = 1e-16
 Identities = 27/177 (15%), Positives = 51/177 (28%), Gaps = 11/177 (6%)

Query: 31  ILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVD 90
           +LG    T Y         + G    V    G    ++          ++G   +KDK  
Sbjct: 8   LLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFA 67

Query: 91  LLKNKFGFDEAFNYKEEP-DLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITL 149
             K +FG  E  N ++    +   L      G++  FE +G   +    L    +G    
Sbjct: 68  RAK-EFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVS 126

Query: 150 CGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY--FHLYPKFLEMMIPRIKEGK 204
             +    + ++          +      +G     +      PK +          K
Sbjct: 127 VVVGVAASGEEI---ATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEY----MSKK 176

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 167

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 72.3 bits (176), Expect = 2e-16
 Identities = 32/151 (21%), Positives = 57/151 (37%), Gaps = 11/151 (7%)

Query: 33  GMPGMTAYAGF---FEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKV 89
           G  G TA        +     +   V V+ A+G VG +        G  VV S G+++  
Sbjct: 2   GTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAA 61

Query: 90  DLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITL 149
           D L  + G  E  + ++    D  LK    +      + VGGK L ++L  ++  G + +
Sbjct: 62  DYL-KQLGASEVISREDVY--DGTLKALSKQQWQGAVDPVGGKQLASLLSKIQYGGSVAV 118

Query: 150 CGMISQYNNDKPEGVHNLTCLISKRIRMEGF 180
            G+              +   I + + + G 
Sbjct: 119 SGLTGGGEVPAT-----VYPFILRGVSLLGI 144

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 71.9 bits (175), Expect = 3e-16
 Identities = 22/174 (12%), Positives = 48/174 (27%), Gaps = 5/174 (2%)

Query: 31  ILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVD 90
           ++G    T Y    +V    QG    V    G    ++          ++G   +KDK  
Sbjct: 8   LIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFA 67

Query: 91  LLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLC 150
             K     +       +  +   L      G++  FE +G        L+   +      
Sbjct: 68  KAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSV 127

Query: 151 GMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGK 204
            +         + +     L+      +G +   +       +  ++      K
Sbjct: 128 IV---GVPPDSQNLSMNPMLLLSGRTWKGAIFGGF--KSKDSVPKLVADFMAKK 176

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 69.9 bits (170), Expect = 2e-15
 Identities = 36/183 (19%), Positives = 64/183 (34%), Gaps = 10/183 (5%)

Query: 23  MPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGS 82
           +P+    G LG    T                     A GAVG      AK+ G  ++ +
Sbjct: 1   VPIEL-LGPLGCGIQTGAGACINALKVTPASSFVTWGA-GAVGLSALLAAKVCGASIIIA 58

Query: 83  AGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGK-MLDAVLLNM 141
               +    L  + G     N K + D  AA+K     G+N   E+ G   +L   +  +
Sbjct: 59  VDIVESRLELAKQLGATHVINSKTQ-DPVAAIKEITDGGVNFALESTGSPEILKQGVDAL 117

Query: 142 RIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIK 201
            I G+I + G        +     ++  L+     + G +         KF+  ++   +
Sbjct: 118 GILGKIAVVGAPQLGTTAQ----FDVNDLLLGGKTILGVVEGSG--SPKKFIPELVRLYQ 171

Query: 202 EGK 204
           +GK
Sbjct: 172 QGK 174

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 177

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 69.9 bits (170), Expect = 2e-15
 Identities = 34/153 (22%), Positives = 54/153 (35%), Gaps = 13/153 (8%)

Query: 31  ILGMPGMTAYAGFF---EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD 87
           I+G  G TA        +     Q   + V+ ASG VG         +G  VV  +G + 
Sbjct: 8   IIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRES 67

Query: 88  KVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRI 147
             + LK   G        E  +     K    +      + VG K+L  VL  M   G +
Sbjct: 68  THEYLK-SLGASRVLPRDEFAESRPLEK----QVWAGAIDTVGDKVLAKVLAQMNYGGCV 122

Query: 148 TLCGMISQYNNDKPEGVHNLTCLISKRIRMEGF 180
             CG+   +          +   I + +R++G 
Sbjct: 123 AACGLAGGFTLP-----TTVMPFILRNVRLQGV 150

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 66.6 bits (161), Expect = 3e-14
 Identities = 23/175 (13%), Positives = 48/175 (27%), Gaps = 8/175 (4%)

Query: 31  ILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVD 90
           +LG    T +         + G    V          V          ++    + DK +
Sbjct: 8   LLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFE 67

Query: 91  LLKNKFGFDEAFNYKEEPDL-DAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITL 149
             K  FG  +  N  +  +     L +    G++   E VG   +    L   ++G    
Sbjct: 68  KAK-VFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVS 126

Query: 150 CGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGK 204
             +     +D           +      +G +   +       +  M+    + K
Sbjct: 127 VLVGWTDLHDVA----TRPIQLIAGRTWKGSMFGGF--KGKDGVPKMVKAYLDKK 175

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 66.5 bits (161), Expect = 4e-14
 Identities = 36/170 (21%), Positives = 56/170 (32%), Gaps = 9/170 (5%)

Query: 31  ILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVD 90
           +    G TAY  F E      G+ V +  A G +G      A+ +G   V          
Sbjct: 8   MAMCSGATAYHAFDEYPESFAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRL 66

Query: 91  LLKNKFGFDEAFNYKE---EPDLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGR 146
            L  + G D   N +E   E    A +      G +   E  G  + L      +R  G 
Sbjct: 67  KLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGF 126

Query: 147 ITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMM 196
            ++ G+        P        L+ K    +G  V D  H + K + + 
Sbjct: 127 YSVAGVAV---PQDPVPFKVYEWLVLKNATFKGIWVSDTSH-FVKTVSIT 172

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 61.4 bits (148), Expect = 2e-12
 Identities = 31/152 (20%), Positives = 50/152 (32%), Gaps = 11/152 (7%)

Query: 31  ILGMPGMTAYAGFF---EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD 87
            +G  G TA        E     +   V V+ A+G VG L        G  V  S G   
Sbjct: 8   AIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAA 67

Query: 88  KVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRI 147
           + D L+             E  +   ++    +      + VGG+ L  VL  MR  G +
Sbjct: 68  EHDYLRVLGAK---EVLAREDVMAERIRPLDKQRWAAAVDPVGGRTLATVLSRMRYGGAV 124

Query: 148 TLCGMISQYNNDKPEGVHNLTCLISKRIRMEG 179
            + G+              +   I + + + G
Sbjct: 125 AVSGLTGGAEVPT-----TVHPFILRGVSLLG 151

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 172

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 60.0 bits (144), Expect = 7e-12
 Identities = 32/174 (18%), Positives = 62/174 (35%), Gaps = 14/174 (8%)

Query: 32  LGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDL 91
           L   G+TAY    +                G +G +  Q  K++    V +   K++   
Sbjct: 12  LADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLK 71

Query: 92  LKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNM-RIQGRITLC 150
           L  + G D   + + +P +   ++     G+N+  + VG +        +    GR+ + 
Sbjct: 72  LAERLGADHVVDARRDP-VKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIV 130

Query: 151 GMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGK 204
           G   +              +IS  +  EG LV +Y       L  ++    +GK
Sbjct: 131 GYGGELR-------FPTIRVISSEVSFEGSLVGNYVE-----LHELVTLALQGK 172

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.3 bits (142), Expect = 1e-11
 Identities = 42/172 (24%), Positives = 70/172 (40%), Gaps = 11/172 (6%)

Query: 32  LGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDL 91
           +G+P  TAY         K GE V V  ASG VG    Q A+  G  ++G+AG+++    
Sbjct: 9   IGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQK- 67

Query: 92  LKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCG 151
           +  + G  E FN++E   +D   K    +GI+I  E +    L   L  +   GR+ + G
Sbjct: 68  IVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVG 127

Query: 152 MISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEG 203
                         N    ++K   + G  +   F    +  +     ++ G
Sbjct: 128 SRGTIEI-------NPRDTMAKESSIIGVTL---FSSTKEEFQQYAAALQAG 169

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 77

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 53.4 bits (128), Expect = 2e-10
 Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 3/67 (4%)

Query: 31 ILGMPGMTAYAGFFEV---CSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD 87
          I+G  G TA      +       Q   + V+ ASG VG         +G  VV  +G + 
Sbjct: 8  IIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRES 67

Query: 88 KVDLLKN 94
            + LK+
Sbjct: 68 THEYLKS 74

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 55.2 bits (132), Expect = 3e-10
 Identities = 26/177 (14%), Positives = 55/177 (31%), Gaps = 12/177 (6%)

Query: 31  ILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVD 90
           ++G    T Y           G    V    G VG       K  G   +   G+     
Sbjct: 7   LIGCGFATGYGAAVNTAKVTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKF 65

Query: 91  LLKNKFGFDEAFNYKEEPD-LDAALKRYFPEGINIYFENVGGK--MLDAVLLNMRIQGRI 147
               + G  E  N K+    +   +      G++   E  G    M++A+       G  
Sbjct: 66  PKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVT 125

Query: 148 TLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGK 204
            + G+    + ++   +  L  L  + ++  G +   +     + +  ++    + K
Sbjct: 126 VVLGL---ASPNERLPLDPLLLLTGRSLK--GSVFGGF---KGEEVSRLVDDYMKKK 174

>d1vj1a1 b.35.1.2 (A:-1-124,A:312-351) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Length = 166

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 51.7 bits (123), Expect = 4e-09
 Identities = 10/60 (16%), Positives = 18/60 (30%), Gaps = 2/60 (3%)

Query: 4   WEEYSLVTAPRLFKIQ--HTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAAS 61
           W+  +++    L K+     D      T   G+  M               + V +S  S
Sbjct: 105 WQTKAILDGNGLEKVDPQLVDGLKVKETVAKGLENMGVAFQSMMTGGNVGKQIVCISEDS 164

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 51.5 bits (122), Expect = 7e-09
 Identities = 30/174 (17%), Positives = 53/174 (30%), Gaps = 9/174 (5%)

Query: 32  LGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDL 91
           +     T + G  E+   + G  V V      VG +    AKL G   +   GS+     
Sbjct: 9   ITDMMTTGFHGA-ELADIEMGSSVVVIGIGA-VGLMGIAGAKLRGAGRIIGVGSRPICVE 66

Query: 92  LKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKM-LDAVLLNMRIQGRITLC 150
               +G  +  NYK     D  +K    +G++      GG   L   +  ++  G I+  
Sbjct: 67  AAKFYGATDILNYKNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPGGIISNI 126

Query: 151 GMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGK 204
                 +      V     +  K I+                 E +   +   +
Sbjct: 127 NYHGSGDALLIPRVEWGCGMAHKTIKGGLCPGGRL------RAERLRDMVVYNR 174

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 48.5 bits (114), Expect = 8e-08
 Identities = 36/175 (20%), Positives = 62/175 (35%), Gaps = 16/175 (9%)

Query: 32  LGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDL 91
             +  +TAY         + GE V V AA+GA+G    Q A+ +G  V+ +A   +K+ L
Sbjct: 9   FPVSFLTAYLALKR-AQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLAL 67

Query: 92  LKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCG 151
                  + A   +          R    G       V GK ++  L  +   GR+   G
Sbjct: 68  PLALGAEEAATYAEVPE-------RAKAWGGLDLVLEVRGKEVEESLGLLAHGGRLVYIG 120

Query: 152 MISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFH---LYPKFLEMMIPRIKEG 203
                             L+ + + + GF +        L  + L  ++PR+   
Sbjct: 121 AAEGEVAP-----IPPLRLMRRNLAVLGFWLTPLLREGALVEEALGFLLPRLGRE 170

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 195

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 48.7 bits (115), Expect = 1e-07
 Identities = 32/197 (16%), Positives = 59/197 (29%), Gaps = 30/197 (15%)

Query: 31  ILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVD 90
            L     T Y G         G  V+V+ A G VG      A+L+G  VV          
Sbjct: 6   CLSDILPTGYHGA-VTAGVGPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARL 63

Query: 91  LLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG----------------KML 134
                 GF+ A    + P  +          ++   + VG                  +L
Sbjct: 64  AHAKAQGFEIADLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVL 123

Query: 135 DAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCL-------ISKRIRMEGFLVPDYFH 187
           ++++   R+ G+I + G+    +    +    +  L        +K         P    
Sbjct: 124 NSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQTPV--- 180

Query: 188 LYPKFLEMMIPRIKEGK 204
              K+   ++  I   +
Sbjct: 181 --MKYNRALMQAIMWDR 195

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} Length = 147

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

 Score = 44.6 bits (105), Expect = 1e-06
 Identities = 9/62 (14%), Positives = 17/62 (27%), Gaps = 6/62 (9%)

Query: 1   MTGWEEYSLVTAPRLFKIQH---TDMPLSYYTGILGMPGMT-AYAGFFEVCSPKQGEYVF 56
            +GW  + +     L K+           +     G   M  A+           G+ V 
Sbjct: 88  QSGWTTHFISDGKGLEKLLTEWPDKKIQYHEHVTKGFENMPAAFIEMLNG--ANLGKAVV 145

Query: 57  VS 58
            +
Sbjct: 146 TA 147

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 44.5 bits (104), Expect = 2e-06
 Identities = 25/179 (13%), Positives = 46/179 (25%), Gaps = 17/179 (9%)

Query: 31  ILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVD 90
           ++G    + Y           G    V    G VG       K+ G   + +     +  
Sbjct: 8   LIGCGFSSGYGAAINTAKVTPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKF 66

Query: 91  LLKNKFGFDEAFNYKEEPD-LDAALKRYFPEGINIYFENVGGK--MLDAVLLNMRIQGRI 147
                 G  +  N +E    +   +      G++   +  G    +  AV   +   G  
Sbjct: 67  PKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSC 126

Query: 148 TLCGMISQYNNDKPEGVHNLTCLISKRIR--MEGFLVPDYFHLYPKFLEMMIPRIKEGK 204
           T+ G            V     ++ + I     G          P  +       K  K
Sbjct: 127 TVVGAKVDEMTIPTVDV-----ILGRSINGTFFGGWKSVDS--VPNLVSDY----KNKK 174

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 42.9 bits (100), Expect = 7e-06
 Identities = 28/171 (16%), Positives = 46/171 (26%), Gaps = 11/171 (6%)

Query: 31  ILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVD 90
           ++G    T Y    +    K G    V    G VG  V    K  G   +          
Sbjct: 9   LIGCGFSTGYGAAVKTGKVKPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKF 67

Query: 91  LLKNKFGFDEAFNYKEEPDLDA-ALKRYFPEGINIYFENVGGK--MLDAVLLNMRIQGRI 147
                 G  E  + K+     +  L       +   FE +G    M+DA+       G  
Sbjct: 68  EKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTS 127

Query: 148 TLCGMISQYNNDKPEGVHNLTCLISKRIR--MEGFLVPDYFHLYPKFLEMM 196
            + G+              +     +  +  + G L        PK +   
Sbjct: 128 VVVGVPPSAKMLTY---DPMLLFTGRTWKGCVFGGLKSRDD--VPKLVTEF 173

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	241
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	100.0
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	100.0
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	100.0
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.98
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	99.97
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	99.97
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.97
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.96
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.96
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.96
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.96
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	99.96
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	99.96
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.96
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	99.96
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	99.95
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.95
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.95
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	99.95
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	99.95
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.95
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.95
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.95
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.94
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.94
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.94
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.94
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.93
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	99.72
d1e3ja1	178	Ketose reductase (sorbitol dehydrogenase) {Silverl	98.99
d1xa0a1	152	B. subtilis YhfP homologue {Bacillus stearothermop	98.97
d1gu7a1	175	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	98.8
d1iz0a1	131	Quinone oxidoreductase {Thermus thermophilus [TaxI	98.76
d1yb5a1	150	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	98.71
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	98.66
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	98.63
d1tt7a1	162	Hypothetical protein YhfP {Bacillus subtilis [TaxI	98.6
d1piwa1	192	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	98.57
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	98.57
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	98.51
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	98.5
d1qora1	147	Quinone oxidoreductase {Escherichia coli [TaxId: 5	98.5
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	98.45
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	98.44
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	98.44
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	98.41
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	98.41
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	98.41
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	98.41
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	98.4
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	98.37
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	98.35
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	98.35
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	98.34
d1pl8a1	185	Ketose reductase (sorbitol dehydrogenase) {Human (	98.34
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	98.34
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	98.33
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	98.32
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	98.31
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	98.31
d1o89a1	146	Hypothetical protein YhdH {Escherichia coli [TaxId	98.31
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	98.3
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	98.28
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	98.28
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	98.27
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	98.26
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	98.25
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	98.21
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	98.21
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	98.2
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	98.19
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	98.19
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	98.19
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	98.18
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	98.18
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	98.17
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	98.15
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	98.14
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	98.11
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	98.1
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	98.1
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	98.1
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	98.09
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	98.08
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	98.07
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	98.07
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	98.05
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	98.03
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	98.02
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	97.99
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	97.97
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	97.96
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	97.92
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	97.92
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.92
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	97.89
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	97.87
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	97.86
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	97.86
d1kola1	201	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	97.86
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	97.85
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	97.85
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	97.83
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	97.81
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	97.78
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	97.76
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	97.75
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	97.75
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	97.73
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	97.72
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	97.69
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	97.66
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	97.62
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	97.61
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	97.59
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.55
d2b25a1	324	Hypothetical protein FLJ20628 {Human (Homo sapiens	97.53
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.5
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	97.47
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	97.46
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.46
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	97.46
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	97.46
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	97.45
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.44
d1i9ga_	264	Probable methyltransferase Rv2118c {Mycobacterium	97.43
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	97.41
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.41
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	97.37
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	97.37
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	97.35
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	97.34
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	97.32
d1vj1a1	166	Putative zinc-binding alcohol dehydrogenase {Mouse	97.32
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	97.31
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	97.3
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	97.27
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	97.25
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	97.24
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.17
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	97.17
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	97.16
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	97.09
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	97.08
d1u2za_	406	Catalytic, N-terminal domain of histone methyltran	97.05
d1v3va1	147	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.02
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	97.01
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	96.96
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	96.96
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	96.94
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	96.88
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	96.88
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	96.88
d1nw3a_	328	Catalytic, N-terminal domain of histone methyltran	96.87
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	96.81
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	96.77
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	96.77
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	96.76
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.76
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.76
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	96.76
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	96.75
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	96.75
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.75
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	96.72
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	96.71
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	96.69
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	96.67
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	96.66
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.66
d2avda1	219	COMT domain-containing protein 1, COMTD1 {Human (H	96.58
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.56
d1p91a_	268	rRNA methyltransferase RlmA {Escherichia coli [Tax	96.56
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	96.55
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	96.51
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	96.5
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	96.5
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	96.48
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	96.41
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	96.41
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	96.39
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.38
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	96.38
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.37
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	96.35
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	96.32
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	96.31
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	96.31
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	96.29
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	96.21
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	96.19
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	96.18
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	96.15
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	96.15
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	96.13
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	96.09
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.04
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	96.03
d1xtpa_	254	Hypothetical protein Lmaj004091aaa (LmjF30.0810) {	96.01
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	95.93
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	95.91
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	95.83
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	95.83
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.81
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	95.78
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	95.77
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	95.75
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	95.75
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	95.69
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	95.58
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	95.54
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	95.53
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	95.51
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	95.49
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	95.43
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	95.37
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	95.34
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	95.33
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	95.24
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	95.21
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	95.19
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	95.13
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	95.12
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	95.09
d1xj5a_	290	Spermidine synthase {Thale cress (Arabidopsis thal	95.07
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.05
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	95.03
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	95.0
d2cl5a1	214	Catechol O-methyltransferase, COMT {Rat (Rattus no	94.96
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	94.96
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	94.95
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.95
d1tw3a2	253	Carminomycin 4-O-methyltransferase {Streptomyces p	94.92
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	94.92
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	94.9
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	94.88
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	94.8
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	94.77
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.75
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	94.69
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	94.59
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	94.57
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	94.52
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	94.46
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	94.46
d2b2ca1	312	Spermidine synthase {Caenorhabditis elegans [TaxId	94.42
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	94.39
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	94.37
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	94.36
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	94.32
d1jqea_	280	Histamine methyltransferase {Human (Homo sapiens)	94.27
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	94.14
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	94.11
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	94.11
d2dula1	375	N(2),N(2)-dimethylguanosine tRNA methyltransferase	94.1
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	94.07
d2fcaa1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil	94.06
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	94.06
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	94.03
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	93.96
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	93.93
d2bhsa1	292	O-acetylserine sulfhydrylase (Cysteine synthase) {	93.93
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	93.86
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	93.82
d1uira_	312	Spermidine synthase {Thermus thermophilus [TaxId:	93.76
d2o07a1	285	Spermidine synthase {Human (Homo sapiens) [TaxId:	93.68
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	93.64
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.58
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	93.55
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	93.55
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	93.52
d1qzza2	256	Aclacinomycin-10-hydroxylase RdmB {Streptomyces pu	93.5
d1iy9a_	274	Spermidine synthase {Bacillus subtilis [TaxId: 142	93.49
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	93.46
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	93.45
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	93.38
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.37
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	93.36
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	93.34
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	93.32
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	93.3
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	93.28
d1mjfa_	276	Putative spermidine synthetase PF0127 (SpeE) {Arch	93.28
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	93.22
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	93.16
d1f8fa1	194	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	93.12
d1jqba1	177	Bacterial secondary alcohol dehydrogenase {Clostri	93.05
d2a14a1	257	Indolethylamine N-methyltransferase, INMT {Human (	92.83
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	92.82
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	92.79
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	92.78
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	92.7
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	92.69
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	92.68
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	92.62
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	92.55
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	92.52
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	92.51
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	92.35
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	92.31
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	92.26
d1euca1	130	Succinyl-CoA synthetase, alpha-chain, N-terminal (	92.24
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	92.16
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	91.97
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	91.93
d1jbqa_	355	Cystathionine beta-synthase {Human (Homo sapiens)	91.77
d2g72a1	263	Phenylethanolamine N-methyltransferase, PNMTase {H	91.72
d1oi7a1	121	Succinyl-CoA synthetase, alpha-chain, N-terminal (	91.68
d1vlma_	208	Possible histamine N-methyltransferase TM1293 {The	91.58
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	91.54
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	91.51
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	91.5
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	91.41
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	91.37
d2nu7a1	119	Succinyl-CoA synthetase, alpha-chain, N-terminal (	91.36
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	91.35
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	91.24
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	90.98
d1obfo1	173	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	90.87
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	90.79
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	90.69
d1inla_	295	Spermidine synthase {Thermotoga maritima [TaxId: 2	90.65
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	90.42
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	90.35
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	90.29
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	90.06
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	90.01
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	89.98
d1u8fo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	89.98
d1sqga2	284	Ribosomal RNA small subunit methyltransferase B, R	89.97
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	89.9
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	89.88
d3cmco1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	89.83
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	89.76
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	89.72
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	89.51
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	89.51
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	89.36
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	89.35
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	89.33
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	89.32
d1omoa_	320	Archaeal alanine dehydrogenase {Archaeon Archaeogl	89.27
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	89.16
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	89.1
d1wkva1	382	O-acetylserine sulfhydrylase (Cysteine synthase) {	89.05
d1lvla1	220	Dihydrolipoamide dehydrogenase {Pseudomonas putida	88.99
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	88.93
d1zn7a1	178	Adenine PRTase {Human (Homo sapiens) [TaxId: 9606]	88.9
d1ebda1	223	Dihydrolipoamide dehydrogenase {Bacillus stearothe	88.85
d1ojta1	229	Dihydrolipoamide dehydrogenase {Neisseria meningit	88.77
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	88.74
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	88.67
d1z7wa1	320	O-acetylserine sulfhydrylase (Cysteine synthase) {	88.57
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	88.31
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	88.14
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	88.14
d1gado1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	88.09
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	87.98
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	87.91
d1x7da_	340	Ornithine cyclodeaminase {Pseudomonas putida [TaxI	87.88
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	87.55
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	87.53
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	87.49
d2b4ro1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	87.39
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	87.38
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	87.25
d3grsa1	221	Glutathione reductase {Human (Homo sapiens) [TaxId	87.23
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	87.04
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	87.02
d1ebfa1	168	Homoserine dehydrogenase {Baker's yeast (Saccharom	86.89
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	86.84
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	86.74
d1qo8a2	317	Flavocytochrome c3 (respiratory fumarate reductase	86.65
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	86.31
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	86.15
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	86.13
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	86.06
d1qb7a_	236	Adenine PRTase {Leishmania donovani [TaxId: 5661]}	86.06
d3lada1	229	Dihydrolipoamide dehydrogenase {Azotobacter vinela	85.88
d2nvwa1	237	Galactose/lactose metabolism regulatory protein GA	85.76
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	85.61
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	85.55
d1ixka_	313	Hypothetical methyltransferase PH1374 {Archaeon Py	85.43
d1g2qa_	178	Adenine PRTase {Baker's yeast (Saccharomyces cerev	85.1
d1h6va1	235	Mammalian thioredoxin reductase {Rat (Rattus norve	85.05
d1d4ca2	322	Flavocytochrome c3 (respiratory fumarate reductase	85.04
d1y7la1	310	O-acetylserine sulfhydrylase (Cysteine synthase) {	84.94
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	84.73
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	84.7
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	84.55
d2bs2a2	336	Fumarate reductase {Wolinella succinogenes [TaxId:	84.53
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	84.34
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	84.07
d1yzha1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Strep	84.07
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	83.91
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	83.69
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	83.66
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	83.42
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	83.32
d1hdgo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	83.21
d1qama_	235	rRNA adenine dimethylase {Bacillus subtilis, Ermc'	83.18
d1lqta2	239	Ferredoxin:NADP reductase FprA {Mycobacterium tube	82.64
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	82.27
d1fcja_	302	O-acetylserine sulfhydrylase (Cysteine synthase) {	81.92
d1onfa1	259	Glutathione reductase {Plasmodium falciparum [TaxI	81.88
d1o58a_	293	O-acetylserine sulfhydrylase (Cysteine synthase) {	81.84
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	81.47
d1mo9a1	261	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	81.06
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	81.06
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	80.94
d2cula1	230	GidA-related protein TTHA1897 {Thermus thermophilu	80.78
d2gmha1	380	Electron transfer flavoprotein-ubiquinone oxidored	80.6
d1jsxa_	207	Glucose-inhibited division protein B (GidB) {Esche	80.19

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=4.7e-34  Score=209.78  Aligned_cols=175  Identities=19%  Similarity=0.313  Sum_probs=154.7

Q ss_pred             hhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCc
Q 026217           28 YTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEE  107 (241)
Q Consensus        28 ~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~  107 (241)
                      |||+++++++|||+++.+.+++++||+|||+||+|++|++++|+|+.+|++|+++++++++.+.++ ++|++++++++++
T Consensus         2 eAA~l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~-~~Ga~~vi~~~~~   80 (183)
T d1pqwa_           2 EAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS-RLGVEYVGDSRSV   80 (183)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-TTCCSEEEETTCS
T ss_pred             chhhhhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccccccceeeecccccccccc-cccccccccCCcc
Confidence            589999999999999999889999999999999999999999999999999999999999999999 9999999999998


Q ss_pred             hhHHHHHHHHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCCCCCCccChHHHhhcceEEEEeecccc-
Q 026217          108 PDLDAALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY-  185 (241)
Q Consensus       108 ~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  185 (241)
                       ++.+++++.+++ ++|++|||+|++.++.++++++++|+++.+|..+..     .........+.+++++.++..... 
T Consensus        81 -~~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~l~~~G~~v~~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~  154 (183)
T d1pqwa_          81 -DFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDVY-----ADASLGLAALAKSASFSVVDLDLNL  154 (183)
T ss_dssp             -THHHHHHHHTTTCCEEEEEECCCTHHHHHHHHTEEEEEEEEECSCGGGT-----TTCEEEGGGGTTTCEEEECCHHHHH
T ss_pred             -CHHHHHHHHhCCCCEEEEEecccchHHHHHHHHhcCCCEEEEEccCCCC-----CCcccchHHHhCCcEEEEEEcccee
Confidence             999999999987 999999999999999999999999999999865432     112334455678999998876544 


Q ss_pred             ---cchhHHHHHHHHHHHHcCCceecc
Q 026217          186 ---FHLYPKFLEMMIPRIKEGKIVYVE  209 (241)
Q Consensus       186 ---~~~~~~~~~~~~~~~~~g~~~~~~  209 (241)
                         ++..++.++++.+++.+|+++|++
T Consensus       155 ~~~~~~~~~~~~~v~~~i~~G~i~p~P  181 (183)
T d1pqwa_         155 KLQPARYRQLLQHILQHVADGKLEVLP  181 (183)
T ss_dssp             HHCHHHHHHHHHHHHHHHHTTSSCCCC
T ss_pred             ccCHHHHHHHHHHHHHHHHCCCCceeC
Confidence               455578899999999999999854

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=100.00  E-value=1.2e-32  Score=201.67  Aligned_cols=173  Identities=46%  Similarity=0.753  Sum_probs=150.7

Q ss_pred             hhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCch
Q 026217           29 TGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEP  108 (241)
Q Consensus        29 ~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~  108 (241)
                      .++++++++|||++|.+.+++++||+|||+||+|++|++++|+|+..|++||++++++++.++++ ++|++++++++++ 
T Consensus         7 l~~lg~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~-~~Ga~~vi~~~~~-   84 (182)
T d1v3va2           7 LGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK-QIGFDAAFNYKTV-   84 (182)
T ss_dssp             GTTTSHHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCSEEEETTSC-
T ss_pred             HHHHhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHH-hhhhhhhcccccc-
Confidence            57889999999999999999999999999999999999999999999999999999999999999 9999999999987 


Q ss_pred             hHHHHHHHHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCC-CCCCccChHHHhhcceEEEEeecccc-
Q 026217          109 DLDAALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNND-KPEGVHNLTCLISKRIRMEGFLVPDY-  185 (241)
Q Consensus       109 ~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-  185 (241)
                      ++.+.+.+.+.+ ++|+||||+|++.++.++++++++|+++.+|..+..+.. ......+...++.+++++.|+.+..+ 
T Consensus        85 ~~~~~~~~~~~~~Gvd~v~D~vG~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~l~~k~~ti~g~~~~~~~  164 (182)
T d1v3va2          85 NSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQ  164 (182)
T ss_dssp             SCHHHHHHHHCTTCEEEEEESSCHHHHHHHGGGEEEEEEEEECCCGGGTTCTTSCCBCCCHHHHHHTTCEEEECCGGGCC
T ss_pred             cHHHHHHHHhhcCCCceeEEecCchhhhhhhhhccCCCeEEeecceeeccccccCCCCcchHHHhhcCcEEEEEEEeccC
Confidence            777777766555 999999999999999999999999999999976543222 12234566788999999999988776 


Q ss_pred             cchhHHHHHHHHHHHHcC
Q 026217          186 FHLYPKFLEMMIPRIKEG  203 (241)
Q Consensus       186 ~~~~~~~~~~~~~~~~~g  203 (241)
                      .+...+.++++.+++.+|
T Consensus       165 ~~~~~~~~~~l~~~i~~G  182 (182)
T d1v3va2         165 GDVREKALRDLMKWVLEG  182 (182)
T ss_dssp             HHHHHHHHHHHHHHHHTT
T ss_pred             hHHHHHHHHHHHHHHhCc
Confidence            455667889999999876

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-32  Score=199.49  Aligned_cols=163  Identities=25%  Similarity=0.349  Sum_probs=142.1

Q ss_pred             hhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCc
Q 026217           28 YTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEE  107 (241)
Q Consensus        28 ~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~  107 (241)
                      ++|+++++++|||+++.+.++++||++|||+||+|++|++++|+|+.+|++|+++++++++.+.++ ++|+++++|+++.
T Consensus         5 ~AA~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~-~~Ga~~vi~~~~~   83 (174)
T d1yb5a2           5 QGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL-QNGAHEVFNHREV   83 (174)
T ss_dssp             HHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCSEEEETTST
T ss_pred             HHHHhHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccccccCccccccccccccccccc-ccCcccccccccc
Confidence            488999999999999988889999999999999999999999999999999999999999999999 9999999999998


Q ss_pred             hhHHHHHHHHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCCCCCCccChHHHhhcceEEEEeeccccc
Q 026217          108 PDLDAALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYF  186 (241)
Q Consensus       108 ~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (241)
                       ++.+.+++.+++ ++|+++||+|++.++.++++++++|+++.+|..+       ..+.++..++.+++++.|+.+... 
T Consensus        84 -~~~~~i~~~t~~~g~d~v~d~~g~~~~~~~~~~l~~~G~iv~~G~~~-------~~~~~~~~~~~k~~~i~g~~~~~~-  154 (174)
T d1yb5a2          84 -NYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVGSRG-------TIEINPRDTMAKESSIIGVTLFSS-  154 (174)
T ss_dssp             -THHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHEEEEEEEEECCCCS-------CEEECTHHHHTTTCEEEECCGGGC-
T ss_pred             -cHHHHhhhhhccCCceEEeecccHHHHHHHHhccCCCCEEEEEecCC-------CCCCCHHHHHHCCCEEEEEEecCC-
Confidence             999999998887 9999999999999999999999999999998632       124566788999999999976543 


Q ss_pred             chhHHHHHHHHHHHHc
Q 026217          187 HLYPKFLEMMIPRIKE  202 (241)
Q Consensus       187 ~~~~~~~~~~~~~~~~  202 (241)
                        .++.++++++++++
T Consensus       155 --~~~~~~~~~~~l~~  168 (174)
T d1yb5a2         155 --TKEEFQQYAAALQA  168 (174)
T ss_dssp             --CHHHHHHHHHHHHH
T ss_pred             --CHHHHHHHHHHHHH
Confidence              13444555555443

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.98  E-value=1.5e-31  Score=195.59  Aligned_cols=170  Identities=24%  Similarity=0.281  Sum_probs=142.6

Q ss_pred             hhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCc
Q 026217           28 YTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEE  107 (241)
Q Consensus        28 ~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~  107 (241)
                      ++|+++++++|||++|.+.++++|||+|+|+||+|++|++++|+|+..|++|++++++++++++++ ++|+++++|++++
T Consensus         5 ~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~-~lGa~~vi~~~~~   83 (179)
T d1qora2           5 QAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KAGAWQVINYREE   83 (179)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HHTCSEEEETTTS
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHH-hcCCeEEEECCCC
Confidence            489999999999999998889999999999999999999999999999999999999999999999 9999999999998


Q ss_pred             hhHHHHHHHHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCCCCCCccChHHHhhc-ceEEEEeecccc
Q 026217          108 PDLDAALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISK-RIRMEGFLVPDY  185 (241)
Q Consensus       108 ~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  185 (241)
                       ++.+++++.+++ ++|+++|++|++.+..++++++++|+++.++....     .....+...+..+ .+.+.+..+..+
T Consensus        84 -d~~~~v~~~t~g~g~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~~  157 (179)
T d1qora2          84 -DLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGNSSG-----AVTGVNLGILNQKGSLYVTRPSLQGY  157 (179)
T ss_dssp             -CHHHHHHHHTTTCCEEEEEECSCGGGHHHHHHTEEEEEEEEECCCTTC-----CCCCBCTHHHHHTTSCEEECCCHHHH
T ss_pred             -CHHHHHHHHhCCCCeEEEEeCccHHHHHHHHHHHhcCCeeeecccccC-----CccccchhhhhccceEEEEeeEEeee
Confidence             999999999988 99999999999999999999999999999887443     2223333344333 344443333322


Q ss_pred             ---cchhHHHHHHHHHHHHcCC
Q 026217          186 ---FHLYPKFLEMMIPRIKEGK  204 (241)
Q Consensus       186 ---~~~~~~~~~~~~~~~~~g~  204 (241)
                         ++...+.+.++.+++++|.
T Consensus       158 ~~~~~~~~~~~~~l~~lv~~Gv  179 (179)
T d1qora2         158 ITTREELTEASNELFSLIASGV  179 (179)
T ss_dssp             CCSHHHHHHHHHHHHHHHHTTS
T ss_pred             cCCHHHHHHHHHHHHHHHHCcC
Confidence               4555677788888988874

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=4.8e-31  Score=193.77  Aligned_cols=179  Identities=38%  Similarity=0.656  Sum_probs=145.8

Q ss_pred             cchhhhhcCchhHHHHHHHHHhcCCCCC--cEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCCee
Q 026217           25 LSYYTGILGMPGMTAYAGFFEVCSPKQG--EYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEA  101 (241)
Q Consensus        25 ~~~~~a~l~~~~~ta~~~l~~~~~~~~~--~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~  101 (241)
                      +|+...+++++++|||+++.+.+++++|  ++|||+||+|++|++++|+||.+|+ .|+++++++++...+.+++|++++
T Consensus         2 ~~~~~galg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~v   81 (187)
T d1vj1a2           2 LSYFLGAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAA   81 (187)
T ss_dssp             GGGGGTTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSEE
T ss_pred             ccHHHHHhhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceEE
Confidence            5555668999999999999999999988  8999999999999999999999999 566677777776666548999999


Q ss_pred             ecCCCchhHHHHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCC----CCCCccChHHHhhcceEE
Q 026217          102 FNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNND----KPEGVHNLTCLISKRIRM  177 (241)
Q Consensus       102 i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~----~~~~~~~~~~~~~~~~~~  177 (241)
                      +|++++ ++.+.+++.++.++|+|||++|++.+...+++++++|+++.+|..++....    .+........+..+++++
T Consensus        82 i~~~~~-~~~~~~~~~~~~GvDvv~D~vGg~~~~~~~~~l~~~G~iv~~G~~s~~~~~~~~~~~~~~~~~~~~~~k~i~~  160 (187)
T d1vj1a2          82 VNYKTG-NVAEQLREACPGGVDVYFDNVGGDISNTVISQMNENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKERNITR  160 (187)
T ss_dssp             EETTSS-CHHHHHHHHCTTCEEEEEESSCHHHHHHHHTTEEEEEEEEEC------------CCCCCHHHHHHHHHTTCEE
T ss_pred             eeccch-hHHHHHHHHhccCceEEEecCCchhHHHHhhhccccccEEEeccccccccccccCCchHHHHHHHHHhcceEE
Confidence            999998 999999999877999999999999999999999999999999975542111    111112234466799999


Q ss_pred             EEeecccccchhHHHHHHHHHHHHcCC
Q 026217          178 EGFLVPDYFHLYPKFLEMMIPRIKEGK  204 (241)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~g~  204 (241)
                      .++.+.++.+.+.+.++++.+++.+|+
T Consensus       161 ~g~~~~~~~~~~~e~~~~l~~~i~~Gk  187 (187)
T d1vj1a2         161 ERFTVLNYKDKFEPGILQLSQWFKEGK  187 (187)
T ss_dssp             EECCGGGCGGGHHHHHHHHHHHHHHTS
T ss_pred             EEeEecchHHHHHHHHHHHHHHHHCcC
Confidence            998887777777899999999999885

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.97  E-value=1.6e-31  Score=193.08  Aligned_cols=168  Identities=21%  Similarity=0.263  Sum_probs=133.0

Q ss_pred             hhhhcCchhHHHHHHHH---HhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecC
Q 026217           28 YTGILGMPGMTAYAGFF---EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNY  104 (241)
Q Consensus        28 ~~a~l~~~~~ta~~~l~---~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~  104 (241)
                      ++|+++++++|||++++   +....++|++|||+||+|++|.+++|+|+++|++|+++++++++.++++ ++|+++++|+
T Consensus         5 eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~-~lGa~~vi~~   83 (176)
T d1xa0a2           5 EAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-VLGAKEVLAR   83 (176)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-HTTCSEEEEC
T ss_pred             HHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHH-hcccceeeec
Confidence            59999999999997764   4577889999999999999999999999999999999999999999999 9999999998


Q ss_pred             CCchhHHHHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCCCCCCccChHHHhhcceEEEEeeccc
Q 026217          105 KEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPD  184 (241)
Q Consensus       105 ~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (241)
                      ++  .+.+.++...++++|+|||++|++.+..++++|+++|+++.+|...+     ...+.+.+.++.|+++++|.....
T Consensus        84 ~~--~~~~~~~~~~~~gvD~vid~vgg~~~~~~l~~l~~~Griv~~G~~~g-----~~~~~~~~~~~~k~~~i~Gv~~~~  156 (176)
T d1xa0a2          84 ED--VMAERIRPLDKQRWAAAVDPVGGRTLATVLSRMRYGGAVAVSGLTGG-----AEVPTTVHPFILRGVSLLGIDSVY  156 (176)
T ss_dssp             C-----------CCSCCEEEEEECSTTTTHHHHHHTEEEEEEEEECSCCSS-----SCCCCCSHHHHHTTCEEEECCSSS
T ss_pred             ch--hHHHHHHHhhccCcCEEEEcCCchhHHHHHHHhCCCceEEEeecccC-----cccCCCHHHHHHCCcEEEEEeCCc
Confidence            75  44555554445599999999999999999999999999999998543     344577889999999999976543


Q ss_pred             ccchhHHHHHHHHHHHHcCCcee
Q 026217          185 YFHLYPKFLEMMIPRIKEGKIVY  207 (241)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~g~~~~  207 (241)
                      .+   .+....+.+.+. |.++|
T Consensus       157 ~~---~~~~~~~~~~la-g~lkP  175 (176)
T d1xa0a2         157 CP---MDLRLRIWERLA-GDLKP  175 (176)
T ss_dssp             CC---HHHHHHHHHHHH-TTTCC
T ss_pred             CC---HHHHHHHHHHHh-cccCC
Confidence            21   233333444442 66665

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.97  E-value=1.6e-29  Score=183.50  Aligned_cols=168  Identities=21%  Similarity=0.262  Sum_probs=147.3

Q ss_pred             hhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCCeeecCCC
Q 026217           28 YTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKE  106 (241)
Q Consensus        28 ~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~i~~~~  106 (241)
                      .++.++|++.|||+++.+.++++||++|+|+|+ |++|++++|+|+.+|+ +|++++++++++++++ ++|+++++|+++
T Consensus         5 ~aapl~ca~~Ta~~a~~~~~~~~~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~-~~Ga~~~i~~~~   82 (174)
T d1f8fa2           5 LLGPLGCGIQTGAGACINALKVTPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK-QLGATHVINSKT   82 (174)
T ss_dssp             GTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-HHTCSEEEETTT
T ss_pred             HHHHHhhHHHHHHHHHHHhhCCCCCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHH-HcCCeEEEeCCC
Confidence            388999999999999988899999999999996 9999999999999999 6778888999999999 999999999998


Q ss_pred             chhHHHHHHHHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeecccCCCCCCCccChHHHhhcceEEEEeecccc
Q 026217          107 EPDLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY  185 (241)
Q Consensus       107 ~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (241)
                      + ++.+++++.+++++|+||||+|+ +.++.++++++++|+++.+|....    .....++...++.+++++.|+..+..
T Consensus        83 ~-~~~~~i~~~t~gg~D~vid~~G~~~~~~~~~~~~~~~G~i~~~G~~~~----~~~~~~~~~~~~~k~~~i~Gs~~g~~  157 (174)
T d1f8fa2          83 Q-DPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQL----GTTAQFDVNDLLLGGKTILGVVEGSG  157 (174)
T ss_dssp             S-CHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCST----TCCCCCCHHHHHHTTCEEEECSGGGS
T ss_pred             c-CHHHHHHHHcCCCCcEEEEcCCcHHHHHHHHhcccCceEEEEEeecCC----CcccccCHHHHHHCCCEEEEEEecCC
Confidence            8 99999999998899999999996 678999999999999999987432    12235678889999999999876553


Q ss_pred             cchhHHHHHHHHHHHHcCC
Q 026217          186 FHLYPKFLEMMIPRIKEGK  204 (241)
Q Consensus       186 ~~~~~~~~~~~~~~~~~g~  204 (241)
                      .  .+++++++++++++|+
T Consensus       158 ~--~~~~~~~~~~l~~~Gk  174 (174)
T d1f8fa2         158 S--PKKFIPELVRLYQQGK  174 (174)
T ss_dssp             C--HHHHHHHHHHHHHTTS
T ss_pred             C--hHHHHHHHHHHHHcCC
Confidence            2  2577899999999885

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.96  E-value=3.2e-29  Score=181.52  Aligned_cols=163  Identities=21%  Similarity=0.274  Sum_probs=146.5

Q ss_pred             hhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCCeeecCCC
Q 026217           28 YTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKE  106 (241)
Q Consensus        28 ~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~i~~~~  106 (241)
                      ++|++++++.|||+++ +..+++++|+|+|+|++|++|++++|+++..|. +|+++++++++.++++ ++|+++++++++
T Consensus         5 eAA~l~c~~~Ta~~al-~~~~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~-~~Ga~~~i~~~~   82 (170)
T d1jvba2           5 EAAPLTCSGITTYRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RAGADYVINASM   82 (170)
T ss_dssp             HHGGGGTHHHHHHHHH-HHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HHTCSEEEETTT
T ss_pred             HHHHHHHHHHHHHHHH-HHhCCCCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHH-HcCCceeeccCC
Confidence            5899999999999999 557999999999999889999999999999996 9999999999999999 999999999988


Q ss_pred             chhHHHHHHHHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeecccCCCCCCCccChHHHhhcceEEEEeeccc
Q 026217          107 EPDLDAALKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPD  184 (241)
Q Consensus       107 ~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (241)
                      + ++.+++++.+.+ ++|+++||+|+ ..++.++++++++|+++.+|..+      ....++...++.+++++.|+..++
T Consensus        83 ~-~~~~~~~~~~~~~~~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~------~~~~~~~~~~~~k~i~i~Gs~~~~  155 (170)
T d1jvba2          83 Q-DPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFG------ADLHYHAPLITLSEIQFVGSLVGN  155 (170)
T ss_dssp             S-CHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSC------CCCCCCHHHHHHHTCEEEECCSCC
T ss_pred             c-CHHHHHHHHhhcccchhhhcccccchHHHhhhhhcccCCEEEEecccc------CccccCHHHHHhCCcEEEEEecCC
Confidence            7 899999988877 89999999997 56788999999999999998733      224577788999999999998876


Q ss_pred             ccchhHHHHHHHHHHHHcCC
Q 026217          185 YFHLYPKFLEMMIPRIKEGK  204 (241)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~g~  204 (241)
                           +++++++++++++|+
T Consensus       156 -----~~d~~~~l~lv~~GK  170 (170)
T d1jvba2         156 -----QSDFLGIMRLAEAGK  170 (170)
T ss_dssp             -----HHHHHHHHHHHHTTS
T ss_pred             -----HHHHHHHHHHHHcCC
Confidence                 778999999999885

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.96  E-value=1.1e-29  Score=186.75  Aligned_cols=171  Identities=20%  Similarity=0.277  Sum_probs=140.1

Q ss_pred             hhhhcCchhHHHHHHHHHhcCCCCCcEEEEE-cCCchHHHHHHHHHHHcCCEEEEEeCCHH----HHHHHHHHcCCCeee
Q 026217           28 YTGILGMPGMTAYAGFFEVCSPKQGEYVFVS-AASGAVGQLVGQFAKLVGCYVVGSAGSKD----KVDLLKNKFGFDEAF  102 (241)
Q Consensus        28 ~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~-ga~g~~G~~avqla~~~g~~v~~~~~~~~----~~~~~~~~~g~~~~i  102 (241)
                      ++|+++++++|||+++.+.++++||++++|+ ||+|++|++++|+||.+|++||+++++++    +.+.++ ++|+++++
T Consensus         5 ~AA~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~-~lGad~vi   83 (189)
T d1gu7a2           5 QGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLK-ELGATQVI   83 (189)
T ss_dssp             HHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHH-HHTCSEEE
T ss_pred             HHHHhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhh-hccccEEE
Confidence            4899999999999999988999999988886 77899999999999999999999986644    455677 99999999


Q ss_pred             cCCCc--hhHHHHHHHH---CCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCCCCCCccChHHHhhcceEE
Q 026217          103 NYKEE--PDLDAALKRY---FPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRM  177 (241)
Q Consensus       103 ~~~~~--~~~~~~i~~~---~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (241)
                      ++++.  .++.+.+++.   .++++|++|||+|++.+...+++|+++|+++.+|...+     .....+...++.+++++
T Consensus        84 ~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~~~~~~~~~~l~~~G~~v~~G~~~~-----~~~~~~~~~l~~k~~~i  158 (189)
T d1gu7a2          84 TEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSF-----QPVTIPTSLYIFKNFTS  158 (189)
T ss_dssp             EHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHHHHHHHHTSCTTCEEEECCCCSS-----CCEEECHHHHHHSCCEE
T ss_pred             eccccchhHHHHHHHHHHhhccCCceEEEECCCcchhhhhhhhhcCCcEEEEECCccC-----CCccCcHHHHHHCCcEE
Confidence            87542  1344445544   34489999999999999999999999999999987432     33456778889999999


Q ss_pred             EEeecccc----cchhHHHHHHHHHHHHcCC
Q 026217          178 EGFLVPDY----FHLYPKFLEMMIPRIKEGK  204 (241)
Q Consensus       178 ~~~~~~~~----~~~~~~~~~~~~~~~~~g~  204 (241)
                      .|+.+..+    ++...+.+.++.+++++|+
T Consensus       159 ~G~~~~~~~~~~~~~~~~~~~~l~~l~~~Gk  189 (189)
T d1gu7a2         159 AGFWVTELLKNNKELKTSTLNQIIAWYEEGK  189 (189)
T ss_dssp             EECCHHHHHTTCHHHHHHHHHHHHHHHHHTC
T ss_pred             EEEEehHhhhhCHHHHHHHHHHHHHHHHcCC
Confidence            99987654    4455678889999998875

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.96  E-value=2.7e-30  Score=186.95  Aligned_cols=145  Identities=25%  Similarity=0.337  Sum_probs=120.6

Q ss_pred             hhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCc
Q 026217           28 YTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEE  107 (241)
Q Consensus        28 ~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~  107 (241)
                      ++|+++++++|||+++.+ ++++|||+|+|+||+|++|++++|+|+..|++|+++++++++.+.++ ++|+++++|+.+ 
T Consensus         5 eAA~l~~~~~TA~~al~~-~~~~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~-~lGa~~~i~~~~-   81 (171)
T d1iz0a2           5 EAAAFPVSFLTAYLALKR-AQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-ALGAEEAATYAE-   81 (171)
T ss_dssp             HHHTSHHHHHHHHHHHHH-TTCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-HTTCSEEEEGGG-
T ss_pred             HHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEeccccchhhhhhhhccccccccccccccccccccc-ccccceeeehhh-
Confidence            488999999999999955 89999999999999999999999999999999999999999999999 999999998864 


Q ss_pred             hhHHHHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCCCCCCccChHHHhhcceEEEEeecccc
Q 026217          108 PDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY  185 (241)
Q Consensus       108 ~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (241)
                        ..+.+..  ++++|+||||+| +.+..++++++++|+++.+|..++     ...+.+...++.+++++.|+.+..+
T Consensus        82 --~~~~~~~--~~g~D~v~d~~G-~~~~~~~~~l~~~G~~v~~G~~~g-----~~~~~~~~~~~~k~~~i~g~~~~~~  149 (171)
T d1iz0a2          82 --VPERAKA--WGGLDLVLEVRG-KEVEESLGLLAHGGRLVYIGAAEG-----EVAPIPPLRLMRRNLAVLGFWLTPL  149 (171)
T ss_dssp             --HHHHHHH--TTSEEEEEECSC-TTHHHHHTTEEEEEEEEEC------------CCCCTTHHHHTTCEEEECCHHHH
T ss_pred             --hhhhhhc--cccccccccccc-hhHHHHHHHHhcCCcEEEEeCCCC-----CCCCccHHHHHHCCcEEEEEeCcCh
Confidence              2333332  238999999988 578899999999999999987543     2334667788999999999987665

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.96  E-value=1.6e-28  Score=177.12  Aligned_cols=162  Identities=21%  Similarity=0.292  Sum_probs=139.6

Q ss_pred             hhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCc
Q 026217           28 YTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEE  107 (241)
Q Consensus        28 ~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~  107 (241)
                      ++|+++++++|||+++. .+++++|++|+|+|+ |++|++++|++|.+|++|+++++++++++.++ ++|+++++|++++
T Consensus         5 ~aA~l~ca~~Ta~~al~-~~~~~~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~-~~Ga~~~i~~~~~   81 (166)
T d1llua2           5 EIAPILCAGVTVYKGLK-QTNARPGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELAR-KLGASLTVNARQE   81 (166)
T ss_dssp             HHGGGGTHHHHHHHHHH-HHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HTTCSEEEETTTS
T ss_pred             HHHHHHHHHHHHHHHHH-HhCCCCCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhh-ccCccccccccch
Confidence            48999999999999995 589999999999996 99999999999999999999999999999999 9999999999987


Q ss_pred             hhHHHHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCCCCCCccChHHHhhcceEEEEeecccccc
Q 026217          108 PDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFH  187 (241)
Q Consensus       108 ~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (241)
                       +..+.+++.+.+..++++++.+++.+..++++++++|+++.+|...      .....+...++.+++++.|+..+.   
T Consensus        82 -~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~l~~~G~iv~~G~~~------~~~~~~~~~~~~k~~~i~Gs~~~~---  151 (166)
T d1llua2          82 -DPVEAIQRDIGGAHGVLVTAVSNSAFGQAIGMARRGGTIALVGLPP------GDFPTPIFDVVLKGLHIAGSIVGT---  151 (166)
T ss_dssp             -CHHHHHHHHHSSEEEEEECCSCHHHHHHHHTTEEEEEEEEECCCCS------SEEEEEHHHHHHTTCEEEECCSCC---
T ss_pred             -hHHHHHHHhhcCCcccccccccchHHHHHHHHhcCCcEEEEEEecC------CCccCCHHHHHhCCcEEEEEeecC---
Confidence             8888888776554444444445688999999999999999998633      223567888999999999998876   


Q ss_pred             hhHHHHHHHHHHHHcCC
Q 026217          188 LYPKFLEMMIPRIKEGK  204 (241)
Q Consensus       188 ~~~~~~~~~~~~~~~g~  204 (241)
                        ++.++++++++.+|.
T Consensus       152 --~~d~~e~l~l~~~Gl  166 (166)
T d1llua2         152 --RADLQEALDFAGEGL  166 (166)
T ss_dssp             --HHHHHHHHHHHHTTS
T ss_pred             --HHHHHHHHHHHHCcC
Confidence              677899999998874

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.96  E-value=2.2e-28  Score=178.89  Aligned_cols=164  Identities=21%  Similarity=0.282  Sum_probs=138.3

Q ss_pred             hhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCCeeecCCC
Q 026217           28 YTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKE  106 (241)
Q Consensus        28 ~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~i~~~~  106 (241)
                      .+|++.|+++|||+++.+.+++++|++|||+|+ |++|++++|+|+++|+ +|+++++++++++.++ ++|+++++|+++
T Consensus         5 ~~a~~~c~~~ta~~al~~~~~~~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~-~lGa~~vi~~~~   82 (182)
T d1vj0a2           5 VLAMAMCSGATAYHAFDEYPESFAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EIGADLTLNRRE   82 (182)
T ss_dssp             HHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-HTTCSEEEETTT
T ss_pred             HHHHhhcHHHHHHHHHHHHhCCCCCCEEEEECC-Cccchhheecccccccccccccccccccccccc-cccceEEEeccc
Confidence            388999999999999988889999999999996 9999999999999998 8999999999999999 999999999987


Q ss_pred             chhH---HHHHHHHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeecccCCCCCCCccC-hHHHhhcceEEEEe
Q 026217          107 EPDL---DAALKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHN-LTCLISKRIRMEGF  180 (241)
Q Consensus       107 ~~~~---~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  180 (241)
                      . +.   .+.+++.+++ ++|+||||+|+ ..++.++++++++|+++.+|...+    ....+.+ ...++.+++++.|+
T Consensus        83 ~-~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~G~iv~~G~~~~----~~~~~~~~~~~l~~k~l~i~G~  157 (182)
T d1vj0a2          83 T-SVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVP----QDPVPFKVYEWLVLKNATFKGI  157 (182)
T ss_dssp             S-CHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSC----CCCEEECHHHHTTTTTCEEEEC
T ss_pred             c-chHHHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCCCEEEEEeecCC----CCccccccHHHHHHCCcEEEEE
Confidence            6 54   4456777777 99999999997 578999999999999999986432    1112233 34567899999999


Q ss_pred             ecccccchhHHHHHHHHHHHHcC
Q 026217          181 LVPDYFHLYPKFLEMMIPRIKEG  203 (241)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~g  203 (241)
                      ..++     .+.++++++++.++
T Consensus       158 ~~~~-----~~~~~~~~~~i~~~  175 (182)
T d1vj0a2         158 WVSD-----TSHFVKTVSITSRN  175 (182)
T ss_dssp             CCCC-----HHHHHHHHHHHHTC
T ss_pred             EeCC-----HHHHHHHHHHHHHC
Confidence            8876     66677788887764

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.96  E-value=1.7e-28  Score=177.41  Aligned_cols=164  Identities=24%  Similarity=0.279  Sum_probs=145.1

Q ss_pred             hhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCc
Q 026217           28 YTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEE  107 (241)
Q Consensus        28 ~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~  107 (241)
                      ++|+++++++|||+++. ..+++||++|+|+|+ |++|++++|+++..|++|++++++++++++++ ++|++.++++++.
T Consensus         5 eAA~l~~~~~Ta~~al~-~~~~~~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k-~~Ga~~~~~~~~~   81 (168)
T d1rjwa2           5 EAAPIFCAGVTTYKALK-VTGAKPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-ELGADLVVNPLKE   81 (168)
T ss_dssp             HHGGGGTHHHHHHHHHH-HHTCCTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCSEEECTTTS
T ss_pred             HHHHHHHHHHHHHHHHH-HhCCCCCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhhh-hcCcceecccccc
Confidence            48999999999999995 579999999999985 99999999999999999999999999999999 9999999999998


Q ss_pred             hhHHHHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCCCCCCccChHHHhhcceEEEEeecccccc
Q 026217          108 PDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFH  187 (241)
Q Consensus       108 ~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (241)
                       ++...+++.+++..|+++++.+...+..++++++++|+++.+|...      .....+...++.+++++.|+....   
T Consensus        82 -~~~~~~~~~~~~~~~~v~~~~~~~~~~~a~~~l~~~G~i~~~g~~~------~~~~~~~~~~~~~~~~i~gs~~~~---  151 (168)
T d1rjwa2          82 -DAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPP------EEMPIPIFDTVLNGIKIIGSIVGT---  151 (168)
T ss_dssp             -CHHHHHHHHHSSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCS------SEEEEEHHHHHHTTCEEEECCSCC---
T ss_pred             -hhhhhcccccCCCceEEeecCCHHHHHHHHHHhccCCceEeccccc------CCCCCCHHHHHHCCcEEEEEeeCC---
Confidence             9999999988776666666655688999999999999999998743      233567788999999999998766   


Q ss_pred             hhHHHHHHHHHHHHcCCce
Q 026217          188 LYPKFLEMMIPRIKEGKIV  206 (241)
Q Consensus       188 ~~~~~~~~~~~~~~~g~~~  206 (241)
                        +++++++++++++|+++
T Consensus       152 --~~~~~~~l~l~~~Gkik  168 (168)
T d1rjwa2         152 --RKDLQEALQFAAEGKVK  168 (168)
T ss_dssp             --HHHHHHHHHHHHTTSCC
T ss_pred             --HHHHHHHHHHHHhCCCC
Confidence              77899999999999875

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.96  E-value=5.1e-28  Score=175.31  Aligned_cols=161  Identities=22%  Similarity=0.306  Sum_probs=139.7

Q ss_pred             hhhhcCchhHHHHHHHHHhc-CCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCCeeecCC
Q 026217           28 YTGILGMPGMTAYAGFFEVC-SPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYK  105 (241)
Q Consensus        28 ~~a~l~~~~~ta~~~l~~~~-~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~i~~~  105 (241)
                      ++|+++++++|||+++.+.. .++||++|+|+|+ |++|++++|+++++|+ +|+++++++++++.++ ++|++++++++
T Consensus         8 eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~-~~ga~~~i~~~   85 (172)
T d1h2ba2           8 EMAPLADAGITAYRAVKKAARTLYPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RLGADHVVDAR   85 (172)
T ss_dssp             HTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-HTTCSEEEETT
T ss_pred             HHhHHHhHHHHHHHHHHHhhhccCCCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHh-hcccceeecCc
Confidence            58999999999999998766 4899999999996 9999999999999997 8888899999999999 99999999988


Q ss_pred             CchhHHHHHHHHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeecccCCCCCCCccChHHHhhcceEEEEeecc
Q 026217          106 EEPDLDAALKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVP  183 (241)
Q Consensus       106 ~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (241)
                      ++ + .+.+.+.+++ ++|+||||+|+ ..++.++++++++|+++.+|...       ..+.+...++.++++++|+..+
T Consensus        86 ~~-~-~~~~~~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~-------~~~~~~~~l~~k~~~i~Gs~~~  156 (172)
T d1h2ba2          86 RD-P-VKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYGG-------ELRFPTIRVISSEVSFEGSLVG  156 (172)
T ss_dssp             SC-H-HHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEEEEEEEEECCCSS-------CCCCCHHHHHHTTCEEEECCSC
T ss_pred             cc-H-HHHHHHhhCCCCceEEEEecCcchHHHHHHHHHhCCCEEEEEeCcc-------cccCCHHHHHhCCcEEEEEEec
Confidence            74 4 4555566666 99999999997 57899999999999999998622       1346778899999999999887


Q ss_pred             cccchhHHHHHHHHHHHHcCC
Q 026217          184 DYFHLYPKFLEMMIPRIKEGK  204 (241)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~g~  204 (241)
                      +     .+.++++++++.+|+
T Consensus       157 ~-----~~d~~~~l~l~~~GK  172 (172)
T d1h2ba2         157 N-----YVELHELVTLALQGK  172 (172)
T ss_dssp             C-----HHHHHHHHHHHHTTS
T ss_pred             C-----HHHHHHHHHHHHcCC
Confidence            7     667889999999885

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.96  E-value=2.2e-28  Score=177.07  Aligned_cols=166  Identities=19%  Similarity=0.157  Sum_probs=136.4

Q ss_pred             hhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCCeeecCCCc
Q 026217           29 TGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEE  107 (241)
Q Consensus        29 ~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~  107 (241)
                      ++.++++++|||+++ +.+++++||+|+|+|+ |++|++++|+|+.+|+ +|+++++++++++.++ ++|+++++|++++
T Consensus         6 A~~l~~~~~ta~~a~-~~a~~~~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~-~lGa~~~i~~~~~   82 (174)
T d1jqba2           6 AVMITDMMTTGFHGA-ELADIEMGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAK-FYGATDILNYKNG   82 (174)
T ss_dssp             HHTTTTHHHHHHHHH-HHTTCCTTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHH-HHTCSEEECGGGS
T ss_pred             HHHhhhHHHHHHHHH-HHhCCCCCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHH-hhCccccccccch
Confidence            667889999999998 5689999999999986 9999999999999998 8999999999999999 9999999999887


Q ss_pred             hhHHHHHHHHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeecccCCCCCCCccChHHHhhcceEEEEeecccc
Q 026217          108 PDLDAALKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY  185 (241)
Q Consensus       108 ~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (241)
                       ++.+.+++.+++ ++|+||||+|+ ..+++++++++++|+++.+|......  ....+...+....++.++.+......
T Consensus        83 -~~~~~v~~~t~g~G~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~~--~~~~~~~~~~~~~~~~~i~g~~~~~~  159 (174)
T d1jqba2          83 -HIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSGD--ALLIPRVEWGCGMAHKTIKGGLCPGG  159 (174)
T ss_dssp             -CHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSSS--EEEEETTTTGGGTBCCEEEEBCCCCH
T ss_pred             -hHHHHHHHHhhccCcceEEEccCCHHHHHHHHHHHhcCCEEEEEeecCCCC--cCcCcHhHHHHHhCccEEEEecCCCC
Confidence             899999999988 99999999996 67899999999999999998744210  00011122334557788888776441


Q ss_pred             cchhHHHHHHHHHHHHcCC
Q 026217          186 FHLYPKFLEMMIPRIKEGK  204 (241)
Q Consensus       186 ~~~~~~~~~~~~~~~~~g~  204 (241)
                          +..++.+.+++..|+
T Consensus       160 ----r~~~e~l~~li~~gk  174 (174)
T d1jqba2         160 ----RLRAERLRDMVVYNR  174 (174)
T ss_dssp             ----HHHHHHHHHHHHTTS
T ss_pred             ----cccHHHHHHHHHcCC
Confidence                445677788888764

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=2.3e-27  Score=171.14  Aligned_cols=160  Identities=24%  Similarity=0.287  Sum_probs=132.8

Q ss_pred             hhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCc
Q 026217           28 YTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEE  107 (241)
Q Consensus        28 ~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~  107 (241)
                      .+|+++|++.|+|+++ +.++++|||+|+|+|+ |++|++++|+|+.+|+++++++++++++++++ ++|+++++|+.++
T Consensus         8 ~~Apl~Cag~Tay~al-~~~~~~~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~-~lGad~~i~~~~~   84 (168)
T d1uufa2           8 AVAPLLCAGITTYSPL-RHWQAGPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK-ALGADEVVNSRNA   84 (168)
T ss_dssp             HHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HHTCSEEEETTCH
T ss_pred             HHHHHHhHHHHHHHHH-HHhCCCCCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHHh-ccCCcEEEECchh
Confidence            3778999999999999 5689999999999996 99999999999999999999999999999999 9999999998875


Q ss_pred             hhHHHHHHHHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeecccCCCCCCCccChHHHhhcceEEEEeeccccc
Q 026217          108 PDLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYF  186 (241)
Q Consensus       108 ~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (241)
                       +....    ..+++|++|||+|+ ..+..++++++++|+++.+|...     .+....+...++.+++++.|+..+.  
T Consensus        85 -~~~~~----~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~-----~~~~~~~~~~l~~k~~~i~Gs~~~~--  152 (168)
T d1uufa2          85 -DEMAA----HLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPA-----TPHKSPEVFNLIMKRRAIAGSMIGG--  152 (168)
T ss_dssp             -HHHHT----TTTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC------------CHHHHHTTTCEEEECCSCC--
T ss_pred             -hHHHH----hcCCCceeeeeeecchhHHHHHHHHhcCCEEEEeccCC-----CCcccccHHHHHHCCcEEEEEeecC--
Confidence             33221    12379999999996 57999999999999999998743     2333467778889999999998877  


Q ss_pred             chhHHHHHHHHHHHHcCCc
Q 026217          187 HLYPKFLEMMIPRIKEGKI  205 (241)
Q Consensus       187 ~~~~~~~~~~~~~~~~g~~  205 (241)
                         .+.++++++++.++++
T Consensus       153 ---~~d~~e~l~l~a~~~I  168 (168)
T d1uufa2         153 ---IPETQEMLDFCAEHGI  168 (168)
T ss_dssp             ---HHHHHHHHHHHHHHTC
T ss_pred             ---HHHHHHHHHHHHHcCC
Confidence               6778889998887653

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.95  E-value=5.3e-27  Score=170.71  Aligned_cols=169  Identities=19%  Similarity=0.215  Sum_probs=136.3

Q ss_pred             hhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCCeeecCCC
Q 026217           28 YTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKE  106 (241)
Q Consensus        28 ~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~i~~~~  106 (241)
                      ++|.++|++.|||+++.+.++++|||+|+|+|+ |++|++++|+++.+|+ +|++++++++++++++ ++|+++++|+.+
T Consensus         5 ~aa~l~ca~~Tay~al~~~~~~~~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak-~lGa~~~i~~~~   82 (176)
T d2fzwa2           5 KVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EFGATECINPQD   82 (176)
T ss_dssp             HHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HHTCSEEECGGG
T ss_pred             HHhHhhcHHHHHHHHHHHhhCCCCCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHH-HhCCcEEEeCCc
Confidence            489999999999999988899999999999997 8999999999999997 8889998999999999 999999998864


Q ss_pred             c-hhHHHHHHHHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeecccCCCCCCCccChHHHhhcceEEEEeeccc
Q 026217          107 E-PDLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPD  184 (241)
Q Consensus       107 ~-~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (241)
                      . .+..+.++..+++++|++||++|+ ..+..+..+++++|+++.++....    ......+....+.++.++.|+...+
T Consensus        83 ~~~~~~~~~~~~~~~g~D~vid~~G~~~~~~~~~~~~~~g~~~~~v~~~~~----~~~~~~~~~~~~~~~~~i~Gs~~G~  158 (176)
T d2fzwa2          83 FSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAA----SGEEIATRPFQLVTGRTWKGTAFGG  158 (176)
T ss_dssp             CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCC----TTCCEEECTHHHHTTCEEEECSGGG
T ss_pred             hhhHHHHHHHHHcCCCCcEeeecCCCHHHHHHHHHhhcCCceeEEEEeecc----ccccccccHHHHHCCCEEEEEeeeC
Confidence            2 156667777777799999999997 567788888888888887755332    1122233344556788999988766


Q ss_pred             ccchhHHHHHHHHHHHHcCC
Q 026217          185 YFHLYPKFLEMMIPRIKEGK  204 (241)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~g~  204 (241)
                      ...  .+++.++++++.+|+
T Consensus       159 ~~~--~~d~~~li~l~~~GK  176 (176)
T d2fzwa2         159 WKS--VESVPKLVSEYMSKK  176 (176)
T ss_dssp             CCH--HHHHHHHHHHHHTTS
T ss_pred             CcH--HHHHHHHHHHHHcCC
Confidence            432  567888999998875

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.95  E-value=4e-28  Score=175.12  Aligned_cols=160  Identities=18%  Similarity=0.169  Sum_probs=135.1

Q ss_pred             hhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCch
Q 026217           29 TGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEP  108 (241)
Q Consensus        29 ~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~  108 (241)
                      +|++.|++.|||+++. ..+++|||+|+|+|+ |++|++++|+++.+|++|+++++++++.++++ ++|+++++++.+..
T Consensus         6 AApl~cag~Ta~~al~-~~~~~~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~-~lGa~~~i~~~~~~   82 (168)
T d1piwa2           6 AAPLLCGGLTVYSPLV-RNGCGPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-KMGADHYIATLEEG   82 (168)
T ss_dssp             HGGGGTHHHHHHHHHH-HTTCSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HHTCSEEEEGGGTS
T ss_pred             HHHHHHHHHHHHHHHH-HhCcCCCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhh-ccCCcEEeeccchH
Confidence            7899999999999995 579999999999996 99999999999999999999999999999999 99999999876531


Q ss_pred             hHHHHHHHHCCCCccEEEeCCCch---hHHHHHHhhccCCEEEEEeeecccCCCCCCCccChHHHhhcceEEEEeecccc
Q 026217          109 DLDAALKRYFPEGINIYFENVGGK---MLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY  185 (241)
Q Consensus       109 ~~~~~i~~~~~~~~d~v~d~~g~~---~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (241)
                      ++.+    ...+++|+++||+++.   .+..++++++++|+++.+|....      ....+...++.+++++.|+...+ 
T Consensus        83 ~~~~----~~~~~~d~vi~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~k~~~i~Gs~~g~-  151 (168)
T d1piwa2          83 DWGE----KYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQ------HEMLSLKPYGLKAVSISYSALGS-  151 (168)
T ss_dssp             CHHH----HSCSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCS------SCCEEECGGGCBSCEEEECCCCC-
T ss_pred             HHHH----hhhcccceEEEEecCCccchHHHHHHHhhccceEEEeccccc------cccccHHHHHhCCcEEEEEeeCC-
Confidence            3332    2234799999998852   46789999999999999986432      23456667888999999998877 


Q ss_pred             cchhHHHHHHHHHHHHcCCce
Q 026217          186 FHLYPKFLEMMIPRIKEGKIV  206 (241)
Q Consensus       186 ~~~~~~~~~~~~~~~~~g~~~  206 (241)
                          ++.++++++++++|+++
T Consensus       152 ----~~~~~e~l~li~~gkIk  168 (168)
T d1piwa2         152 ----IKELNQLLKLVSEKDIK  168 (168)
T ss_dssp             ----HHHHHHHHHHHHHTTCC
T ss_pred             ----HHHHHHHHHHHHhCCCC
Confidence                77889999999999875

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=1.2e-28  Score=178.27  Aligned_cols=167  Identities=20%  Similarity=0.241  Sum_probs=134.9

Q ss_pred             cchhhhhcCchhHHHHHHHHH---hcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCee
Q 026217           25 LSYYTGILGMPGMTAYAGFFE---VCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEA  101 (241)
Q Consensus        25 ~~~~~a~l~~~~~ta~~~l~~---~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~  101 (241)
                      +. ++|++++++.|||++++.   .....++++|||+||+|++|++++|+||++|++||++++++++.+.++ ++|++++
T Consensus         3 ~~-~Aa~lg~aGlTA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~-~lGad~v   80 (177)
T d1o89a2           3 AR-KAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK-SLGASRV   80 (177)
T ss_dssp             HH-HHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH-HHTEEEE
T ss_pred             HH-HHHHcccHHHHHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHH-hhccccc
Confidence            44 599999999999987643   233445669999999999999999999999999999999999999999 9999999


Q ss_pred             ecCCCchhHHHHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCCCCCCccChHHHhhcceEEEEee
Q 026217          102 FNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFL  181 (241)
Q Consensus       102 i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (241)
                      +|+++. ++.+   .+.+...|.++|++|+..+...+++++++|+++.+|..++     ...+.+...++.+++++.|++
T Consensus        81 i~~~~~-~~~~---~l~~~~~~~vvD~Vgg~~~~~~l~~l~~~Griv~~G~~~~-----~~~~~~~~~~~~k~~~i~G~~  151 (177)
T d1o89a2          81 LPRDEF-AESR---PLEKQVWAGAIDTVGDKVLAKVLAQMNYGGCVAACGLAGG-----FTLPTTVMPFILRNVRLQGVD  151 (177)
T ss_dssp             EEGGGS-SSCC---SSCCCCEEEEEESSCHHHHHHHHHTEEEEEEEEECCCTTC-----SCCCCCSHHHHHHCCEEEECC
T ss_pred             cccccH-HHHH---HHHhhcCCeeEEEcchHHHHHHHHHhccccceEeecccCC-----ccccccHHHHHHCCCeEEEEe
Confidence            998765 4432   2333468999999999999999999999999999998543     334566788999999999986


Q ss_pred             cccc-cchhHHHHHHHHHHHHc
Q 026217          182 VPDY-FHLYPKFLEMMIPRIKE  202 (241)
Q Consensus       182 ~~~~-~~~~~~~~~~~~~~~~~  202 (241)
                      .... ++...+.|+++.+.+.+
T Consensus       152 ~~~~~~~~~~~~~~~L~~~l~~  173 (177)
T d1o89a2         152 SVMTPPERRAQAWQRLVADLPE  173 (177)
T ss_dssp             SSSCCHHHHHHHHHHHHHHSCH
T ss_pred             cccCCHHHHHHHHHHHHHhccc
Confidence            6443 55556667776665543

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=4e-27  Score=170.43  Aligned_cols=165  Identities=18%  Similarity=0.203  Sum_probs=137.8

Q ss_pred             chhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCCeeecC
Q 026217           26 SYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNY  104 (241)
Q Consensus        26 ~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~i~~  104 (241)
                      |++.|++..++++||+++ +.+++++||+|+|+|+ |++|++++|+++++|+ +|+++++++++++.++ ++|+++++++
T Consensus         2 S~e~Aal~epla~a~~a~-~~~~~~~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~-~~Ga~~~~~~   78 (171)
T d1pl8a2           2 TFEEGALIEPLSVGIHAC-RRGGVTLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EIGADLVLQI   78 (171)
T ss_dssp             CHHHHHHHHHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HTTCSEEEEC
T ss_pred             CHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHH-HhCCcccccc
Confidence            456677889999999999 4579999999999996 9999999999999999 8999999999999999 9999998888


Q ss_pred             CCchhHHHHHHH---HCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeecccCCCCCCCccChHHHhhcceEEEEe
Q 026217          105 KEEPDLDAALKR---YFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGF  180 (241)
Q Consensus       105 ~~~~~~~~~i~~---~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (241)
                      ++. +..+..+.   ..+.++|++|||+|+ ..++.++++++++|+++.+|...      ...+.+...++.|++++.|+
T Consensus        79 ~~~-~~~~~~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~gG~iv~~G~~~------~~~~~~~~~~~~k~l~i~Gs  151 (171)
T d1pl8a2          79 SKE-SPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGS------EMTTVPLLHAAIREVDIKGV  151 (171)
T ss_dssp             SSC-CHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCC------SCCCCCHHHHHHTTCEEEEC
T ss_pred             ccc-ccccccccccccCCCCceEEEeccCCchhHHHHHHHhcCCCEEEEEecCC------CCCccCHHHHHHCCcEEEEE
Confidence            765 55444333   334489999999997 57899999999999999999743      22357788999999999998


Q ss_pred             ecccccchhHHHHHHHHHHHHcCCce
Q 026217          181 LVPDYFHLYPKFLEMMIPRIKEGKIV  206 (241)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~g~~~  206 (241)
                      ..+      .+.++++++++++|+++
T Consensus       152 ~~~------~~~~~~al~li~~gkid  171 (171)
T d1pl8a2         152 FRY------CNTWPVAISMLASKSVN  171 (171)
T ss_dssp             CSC------SSCHHHHHHHHHTTSCC
T ss_pred             eCC------HhHHHHHHHHHHcCCCC
Confidence            643      23478889999999874

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.95  E-value=7.8e-27  Score=168.91  Aligned_cols=167  Identities=16%  Similarity=0.162  Sum_probs=133.8

Q ss_pred             hhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCCeeecCCC
Q 026217           28 YTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKE  106 (241)
Q Consensus        28 ~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~i~~~~  106 (241)
                      ++|.+.|++.|||+++.+.++++|||+|+|+|+ |++|++++|+++.+|+ +|++++++++++++++ ++|+++++|+++
T Consensus         4 eaa~lgCa~~Ta~~a~~~~a~~~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~-~lGa~~~i~~~~   81 (174)
T d1p0fa2           4 ESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-ELGATECLNPKD   81 (174)
T ss_dssp             GGGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HTTCSEEECGGG
T ss_pred             HHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHH-HcCCcEEEcCCC
Confidence            488999999999999988899999999999996 9999999999999998 8999999999999999 999999998875


Q ss_pred             chh-HHHHHHHHCCCCccEEEeCCCc-hhHHHHHHhhcc-CCEEEEEeeecccCCCCCCCccChHHHhhcceEEEEeecc
Q 026217          107 EPD-LDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRI-QGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVP  183 (241)
Q Consensus       107 ~~~-~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~-~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (241)
                      ... ..+..+..+++++|++||++|+ ..+..++..+.+ +|+++.+|....    ....+.++.. +.++.++.|+.+.
T Consensus        82 ~d~~~~~~~~~~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~----~~~~~~~~~~-~~~~~~i~Gs~~G  156 (174)
T d1p0fa2          82 YDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASP----NERLPLDPLL-LLTGRSLKGSVFG  156 (174)
T ss_dssp             CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCT----TCCEEECTHH-HHTTCEEEECSGG
T ss_pred             chhHHHHHHHHhcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecC----ccccccCHHH-HhCCCEEEEEEeC
Confidence            412 4555555666699999999997 577788888876 599999997432    1122233333 4467899999876


Q ss_pred             cccchhHHHHHHHHHHHHcCC
Q 026217          184 DYFHLYPKFLEMMIPRIKEGK  204 (241)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~g~  204 (241)
                      ++.   .+++.++++++.+|+
T Consensus       157 ~~~---~~d~~~lidl~~~gK  174 (174)
T d1p0fa2         157 GFK---GEEVSRLVDDYMKKK  174 (174)
T ss_dssp             GCC---GGGHHHHHHHHHTTS
T ss_pred             CCC---HHHHHHHHHHHHcCC
Confidence            542   346788889988875

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.95  E-value=1.3e-26  Score=167.73  Aligned_cols=164  Identities=20%  Similarity=0.220  Sum_probs=134.2

Q ss_pred             chhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCC
Q 026217           26 SYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYK  105 (241)
Q Consensus        26 ~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~  105 (241)
                      |++.|++..++++||+++ +.+++++||+|+|+| +|++|++++|+++.+|++|++++++++++++++ ++|++..++++
T Consensus         2 S~e~Aal~ePla~a~~a~-~~~~~~~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~-~~ga~~~~~~~   78 (170)
T d1e3ja2           2 SLEEGALLEPLSVGVHAC-RRAGVQLGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK-NCGADVTLVVD   78 (170)
T ss_dssp             CHHHHHTHHHHHHHHHHH-HHHTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HTTCSEEEECC
T ss_pred             CHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHH-HcCCcEEEecc
Confidence            456778888999999999 557999999999998 599999999999999999999999999999999 99998765443


Q ss_pred             C--c--hhHHHHHHHHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeecccCCCCCCCccChHHHhhcceEEEEe
Q 026217          106 E--E--PDLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGF  180 (241)
Q Consensus       106 ~--~--~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (241)
                      .  .  .+..+.+++..++++|+||||+|+ ..+..++++++++|+++.+|...      .....+...++.+++++.|+
T Consensus        79 ~~~~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~------~~~~~~~~~~~~k~i~i~gs  152 (170)
T d1e3ja2          79 PAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGS------QMVTVPLVNACAREIDIKSV  152 (170)
T ss_dssp             TTTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCS------SCCCCCHHHHHTTTCEEEEC
T ss_pred             ccccccchhhhhhhcccccCCceeeecCCChHHHHHHHHHHhcCCceEEEecCC------CCCCcCHHHHHHCCCEEEEE
Confidence            2  1  134456666666699999999997 57899999999999999999743      22346778899999999998


Q ss_pred             ecccccchhHHHHHHHHHHHHcCC
Q 026217          181 LVPDYFHLYPKFLEMMIPRIKEGK  204 (241)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~g~  204 (241)
                      ..+.      +.++++++++++|+
T Consensus       153 ~~~~------~~~~~ai~li~~Gk  170 (170)
T d1e3ja2         153 FRYC------NDYPIALEMVASGR  170 (170)
T ss_dssp             CSCS------SCHHHHHHHHHTTS
T ss_pred             ECCH------HHHHHHHHHHHcCC
Confidence            6432      24677888888875

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.95  E-value=6.3e-27  Score=169.12  Aligned_cols=166  Identities=16%  Similarity=0.174  Sum_probs=133.9

Q ss_pred             hhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCCeeecCCC
Q 026217           28 YTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKE  106 (241)
Q Consensus        28 ~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~i~~~~  106 (241)
                      ++|.++|++.|+|+++.+.+++++||+|+|+|+ |++|++++|+++.+|+ +|++++.++++++.++ ++|++++++++.
T Consensus         5 ~aa~l~Ca~~T~~~a~~~~a~v~~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~-~~Ga~~~i~~~~   82 (174)
T d1e3ia2           5 RVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK-ALGATDCLNPRE   82 (174)
T ss_dssp             HHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTTCSEEECGGG
T ss_pred             HHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHHH-HhCCCcccCCcc
Confidence            488999999999999988899999999999985 9999999999999999 7999999999999999 999999988754


Q ss_pred             ch-hHHHHHHHHCCCCccEEEeCCCc-hhHHHHHHhhccC-CEEEEEeeecccCCCCCCCccChHHHhhcceEEEEeecc
Q 026217          107 EP-DLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQ-GRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVP  183 (241)
Q Consensus       107 ~~-~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (241)
                      .. ......+...++++|++|||+|+ ..+..++++++++ |+++.+|...      +...++...++. +.++.|+...
T Consensus        83 ~~~~~~~~~~~~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~------~~~~i~~~~~~~-~k~i~Gs~~G  155 (174)
T d1e3ia2          83 LDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKV------DEMTIPTVDVIL-GRSINGTFFG  155 (174)
T ss_dssp             CSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSS------SEEEEEHHHHHT-TCEEEECSGG
T ss_pred             chhhhhhhHhhhhcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCC------CccccchHHHhc-cCEEEEEEee
Confidence            31 34444444455599999999997 6889999999996 9999998733      222344444443 5678888776


Q ss_pred             cccchhHHHHHHHHHHHHcCC
Q 026217          184 DYFHLYPKFLEMMIPRIKEGK  204 (241)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~g~  204 (241)
                      ++.  ..+++.++++++.+|+
T Consensus       156 s~~--~~~d~p~li~l~~~GK  174 (174)
T d1e3ia2         156 GWK--SVDSVPNLVSDYKNKK  174 (174)
T ss_dssp             GCC--HHHHHHHHHHHHHTTS
T ss_pred             CCC--hHHHHHHHHHHHHCcC
Confidence            542  2567888999988875

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.94  E-value=4.5e-26  Score=165.62  Aligned_cols=171  Identities=18%  Similarity=0.200  Sum_probs=135.6

Q ss_pred             cchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCCeeec
Q 026217           25 LSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFN  103 (241)
Q Consensus        25 ~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~i~  103 (241)
                      ++ ++|.++|++.|||+++.+.++++|||+|+|+|+ |++|++++|+++..|+ +|++++++++++++++ ++|++++++
T Consensus         3 le-~aa~l~ca~~Tay~al~~~~~vk~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~-~~Ga~~~i~   79 (176)
T d2jhfa2           3 LE-KVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK-EVGATECVN   79 (176)
T ss_dssp             HH-HHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTTCSEEEC
T ss_pred             HH-HHhHhhcHHHHHHHHHHHhhCCCCCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHH-HhCCeeEEe
Confidence            44 489999999999999988899999999999997 8999999999999986 9999999999999999 999999887


Q ss_pred             CCCch-hHHHHHHHHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeecccCCCCCCCccChHHHhhcceEEEEee
Q 026217          104 YKEEP-DLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFL  181 (241)
Q Consensus       104 ~~~~~-~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (241)
                      +.+.. .....++...++++|++||++|. ..+..++..++++|+.+.++...+    ..........++.+++++.|+.
T Consensus        80 ~~~~~~~~~~~~~~~~~~G~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~i~Gs~  155 (176)
T d2jhfa2          80 PQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPP----DSQNLSMNPMLLLSGRTWKGAI  155 (176)
T ss_dssp             GGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCC----TTCCEEECTHHHHTTCEEEECS
T ss_pred             cCCchhHHHHHHHHHhcCCCCEEEecCCchhHHHHHHHHHhcCCcceEEecCCC----CcccccccHHHHhCCCEEEEEE
Confidence            75421 35555666666699999999997 567888999988765555554221    1222233346677999999997


Q ss_pred             cccccchhHHHHHHHHHHHHcCC
Q 026217          182 VPDYFHLYPKFLEMMIPRIKEGK  204 (241)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~g~  204 (241)
                      ..++.  .++++.++++++.+|+
T Consensus       156 ~G~~~--~~~~~~~li~~~~~GK  176 (176)
T d2jhfa2         156 FGGFK--SKDSVPKLVADFMAKK  176 (176)
T ss_dssp             GGGCC--HHHHHHHHHHHHHTTS
T ss_pred             EeCCC--HHHHHHHHHHHHHCcC
Confidence            76542  2667888999998875

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.94  E-value=8.4e-26  Score=164.11  Aligned_cols=170  Identities=15%  Similarity=0.133  Sum_probs=134.5

Q ss_pred             cchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCCeeec
Q 026217           25 LSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFN  103 (241)
Q Consensus        25 ~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~i~  103 (241)
                      ++ ++|.++|++.|+|+++.+.+++++||+|+|+|+ |++|+.+++++++.|+ +|+++++++++++.++ ++|+++++|
T Consensus         3 ~e-~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~-~~GAd~~in   79 (175)
T d1cdoa2           3 LD-TVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VFGATDFVN   79 (175)
T ss_dssp             HH-HHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTTCCEEEC
T ss_pred             HH-HHHHhhcHHHHHHHHHHHhhCCCCCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHH-HcCCcEEEc
Confidence            44 488999999999999988899999999999996 9999999999999987 8999999999999999 999999999


Q ss_pred             CCCchhHHHHHHHHC-CCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeecccCCCCCCCccChHHHhhcceEEEEee
Q 026217          104 YKEEPDLDAALKRYF-PEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFL  181 (241)
Q Consensus       104 ~~~~~~~~~~i~~~~-~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (241)
                      ++++.+..++++..+ ++++|+++|++|+ ..+..+..++.++|.++.++...     ......+....+.++.++.|+.
T Consensus        80 ~~~~~~~~~~~~~~~~~~G~d~vid~~G~~~~~~~a~~~~~~g~~~~~~~g~~-----~~~~~~~~~~~~~~~~~i~Gs~  154 (175)
T d1cdoa2          80 PNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWT-----DLHDVATRPIQLIAGRTWKGSM  154 (175)
T ss_dssp             GGGCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCC-----SSSCEEECHHHHHTTCEEEECS
T ss_pred             CCCcchhHHHHHHhhccCCcceeeeecCCHHHHHHHHHHhhCCCcceeEEEec-----CCcccCccHHHHHCCcEEEEEE
Confidence            876423445555554 4499999999997 56778888877776555544322     1222344556677888999988


Q ss_pred             cccccchhHHHHHHHHHHHHcCC
Q 026217          182 VPDYFHLYPKFLEMMIPRIKEGK  204 (241)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~g~  204 (241)
                      .+++.  .++++.++++++.+|+
T Consensus       155 ~G~~~--~~~d~~~~i~l~~~gK  175 (175)
T d1cdoa2         155 FGGFK--GKDGVPKMVKAYLDKK  175 (175)
T ss_dssp             GGGCC--HHHHHHHHHHHHHTTS
T ss_pred             EeCCc--HHHHHHHHHHHHHcCC
Confidence            76542  2678889999998875

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.94  E-value=9.5e-26  Score=163.36  Aligned_cols=166  Identities=16%  Similarity=0.162  Sum_probs=130.1

Q ss_pred             hhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCCeeecCCC
Q 026217           28 YTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKE  106 (241)
Q Consensus        28 ~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~i~~~~  106 (241)
                      .+|.++|++.|+|+++.+.+++++||+|+|+|+ |++|+.++|+++.+|+ +|++++.++++++.++ ++|+++++|+++
T Consensus         6 ~aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak-~~GA~~~in~~~   83 (176)
T d1d1ta2           6 KVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAM-AVGATECISPKD   83 (176)
T ss_dssp             HHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HHTCSEEECGGG
T ss_pred             HHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHH-hcCCcEEECccc
Confidence            489999999999999988889999999999996 9999999999999997 8999999999999999 999999999876


Q ss_pred             chhHHHHHHHHCCC-CccEEEeCCCc-hhHHHHHHhhccC-CEEEEEeeecccCCCCCCCccChHHHhhcceEEEEeecc
Q 026217          107 EPDLDAALKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQ-GRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVP  183 (241)
Q Consensus       107 ~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (241)
                      .....+.+.+.+.+ ++|+++|++|+ ..+..++..+.++ |+++.+|....    ......++ ..+.++.++.|+...
T Consensus        84 ~~~~~~~~~~~~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~----~~~~~~~~-~~~~~~~~i~Gs~~G  158 (176)
T d1d1ta2          84 STKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPS----AKMLTYDP-MLLFTGRTWKGCVFG  158 (176)
T ss_dssp             CSSCHHHHHHHHHTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCT----TCCEEECT-HHHHTTCEEEECSGG
T ss_pred             cchHHHHHHHHhccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEcccc----ccccCCCH-HHHhCCCEEEEEEEe
Confidence            41334555555544 99999999997 4677777777654 99999997432    11122233 344567899998876


Q ss_pred             cccchhHHHHHHHHHHHHc
Q 026217          184 DYFHLYPKFLEMMIPRIKE  202 (241)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~  202 (241)
                      +...  ++++.++++++.+
T Consensus       159 ~~~~--~~dip~li~~~~~  175 (176)
T d1d1ta2         159 GLKS--RDDVPKLVTEFLA  175 (176)
T ss_dssp             GCCH--HHHHHHHHHHHTT
T ss_pred             CCCc--HHHHHHHHHHHhC
Confidence            5422  5667777776543

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.94  E-value=1.6e-27  Score=170.69  Aligned_cols=144  Identities=23%  Similarity=0.311  Sum_probs=117.6

Q ss_pred             chhHHHHHH---HHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhH
Q 026217           34 MPGMTAYAG---FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDL  110 (241)
Q Consensus        34 ~~~~ta~~~---l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~  110 (241)
                      +++.|||.+   |.+....+++++|||+||+|++|++++|+||.+|++|+++++++++.++++ ++|+++++++++  ..
T Consensus         3 ~aGlTA~~a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~-~lGad~vi~~~~--~~   79 (167)
T d1tt7a2           3 TAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK-QLGASEVISRED--VY   79 (167)
T ss_dssp             HHHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH-HHTCSEEEEHHH--HC
T ss_pred             ChHHHHHHHHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHH-hhcccceEeccc--hh
Confidence            456677755   444455677889999999999999999999999999999999999999999 999999987743  22


Q ss_pred             HHHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeeecccCCCCCCCccChHHHhhcceEEEEeecccc
Q 026217          111 DAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY  185 (241)
Q Consensus       111 ~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (241)
                      .+.++...++++|+|+|++|++.+..++++++++|+++.+|...+     ...+.+...++.++++++|+.....
T Consensus        80 ~~~~~~~~~~gvd~vid~vgg~~~~~~~~~l~~~G~iv~~G~~~g-----~~~~~~~~~l~~k~~~i~G~~~~~~  149 (167)
T d1tt7a2          80 DGTLKALSKQQWQGAVDPVGGKQLASLLSKIQYGGSVAVSGLTGG-----GEVPATVYPFILRGVSLLGIDSVYC  149 (167)
T ss_dssp             SSCCCSSCCCCEEEEEESCCTHHHHHHHTTEEEEEEEEECCCSSC-----SCEEECSHHHHTSCCEEEECCSSSC
T ss_pred             chhhhcccCCCceEEEecCcHHHHHHHHHHhccCceEEEeeccCC-----CcccCCHHHHHHCCcEEEEEecCCC
Confidence            223333334499999999999999999999999999999998543     3445678889999999999875443

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.93  E-value=6.4e-25  Score=161.39  Aligned_cols=167  Identities=19%  Similarity=0.183  Sum_probs=136.9

Q ss_pred             hhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCCeeecCCCc
Q 026217           29 TGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEE  107 (241)
Q Consensus        29 ~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~  107 (241)
                      .++|+..+.|||+++ +.+++++||+|+|+|+ |++|++++|+++..|+ +|++++.++++++.++ ++|+++++++.+.
T Consensus         4 ~~~l~d~~~ta~~a~-~~a~v~~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~-~~Ga~~~~~~~~~   80 (195)
T d1kola2           4 LTCLSDILPTGYHGA-VTAGVGPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK-AQGFEIADLSLDT   80 (195)
T ss_dssp             HGGGGTHHHHHHHHH-HHTTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HTTCEEEETTSSS
T ss_pred             HHhcccHHHHHHHHH-HHhCCCCCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhh-hccccEEEeCCCc
Confidence            688999999999998 5689999999999996 9999999999999998 8999999999999999 9999999999887


Q ss_pred             hhHHHHHHHHCCC-CccEEEeCCCc----------------hhHHHHHHhhccCCEEEEEeeecccCC-C------CCCC
Q 026217          108 PDLDAALKRYFPE-GINIYFENVGG----------------KMLDAVLLNMRIQGRITLCGMISQYNN-D------KPEG  163 (241)
Q Consensus       108 ~~~~~~i~~~~~~-~~d~v~d~~g~----------------~~~~~~~~~l~~~G~~v~~g~~~~~~~-~------~~~~  163 (241)
                       ++.+++.+.+++ ++|++|||+|.                +.++.++++++++|+++.+|...+... .      ....
T Consensus        81 -~~~~~i~~~t~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~gG~v~~~G~~~~~~~~~~~~~~~~~~~  159 (195)
T d1kola2          81 -PLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKIGSL  159 (195)
T ss_dssp             -CHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCTTCSSHHHHTTCC
T ss_pred             -CHHHHHHHHhCCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcCCEEEEeeecCCCcccchhhhhhcCce
Confidence             999999999888 99999999983                478999999999999999997443210 0      0112


Q ss_pred             ccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcCC
Q 026217          164 VHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGK  204 (241)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  204 (241)
                      ..++...+.++.++.+-..     ..++.++++++++.+++
T Consensus       160 ~~~~~~~~~k~~~i~~g~~-----~v~~~~~~Ll~~I~~~k  195 (195)
T d1kola2         160 SIRFGLGWAKSHSFHTGQT-----PVMKYNRALMQAIMWDR  195 (195)
T ss_dssp             CCCHHHHHHTTCEEEESSC-----CHHHHHHHHHHHHHTTS
T ss_pred             eeeHHHHHhhcceeccCCC-----chHHHHHHHHHHHHcCC
Confidence            3444556778888765332     22566788888887764

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.72  E-value=4.4e-18  Score=103.89  Aligned_cols=70  Identities=27%  Similarity=0.369  Sum_probs=64.0

Q ss_pred             hhhhcCchhHHHHHHHHHh---cCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC
Q 026217           28 YTGILGMPGMTAYAGFFEV---CSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF   98 (241)
Q Consensus        28 ~~a~l~~~~~ta~~~l~~~---~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~   98 (241)
                      +++++++++.|||++++..   ...+++++|+|+||+|++|.+++|+++.+|++|++++++++++++++ ++|+
T Consensus         5 eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~-~lGA   77 (77)
T d1o8ca2           5 KAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK-SLGA   77 (77)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH-HHTE
T ss_pred             HHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHH-HCCC
Confidence            5899999999999887643   45789999999999999999999999999999999999999999999 8874

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=98.99  E-value=5.7e-11  Score=85.00  Aligned_cols=58  Identities=12%  Similarity=0.043  Sum_probs=51.3

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCC
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAAS   61 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~   61 (241)
                      +|+||||+++|++.++++ |++++.. ++|++++++.|||+++ +.+++++|++|+|+||+
T Consensus       119 ~G~~aey~~v~~~~~~~i-P~~~~~~-~aa~~~~~~~ta~~a~-~~~~~~~g~~VlVig~C  176 (178)
T d1e3ja1         119 DGNLARYYVHAADFCHKL-PDNCNVK-QLVTHSFKLEQTVDAF-EAARKKADNTIKVMISC  176 (178)
T ss_dssp             CCSCBSEEEEEGGGEEEC-CTTCCCG-GGEEEEEEGGGHHHHH-HHHHHCCTTCSEEEEEC
T ss_pred             ccccceeeeecccceeeC-CCCCCHH-HHHHHHhHHHHHHHHH-HHhCCCCCCEEEEEccc
Confidence            489999999999999999 9995555 4788889999999998 56899999999999974

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.97  E-value=1.7e-10  Score=80.19  Aligned_cols=55  Identities=15%  Similarity=0.170  Sum_probs=49.0

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEc
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSA   59 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~g   59 (241)
                      +|+||||+.+|++.++++ |++  ++.++|+++++.+|||.++.....++ |++|||+|
T Consensus        98 ~G~~aEy~~v~~~~~~~i-P~~--l~~~aa~l~~a~~ta~~~~~~~~~~~-G~tVL~l~  152 (152)
T d1xa0a1          98 FGGYSEYARLHGEWLVPL-PKG--LERIAQEISLAELPQALKRILRGELR-GRTVVRLA  152 (152)
T ss_dssp             CCSSBSEEEECGGGCEEC-CTT--HHHHEEEEEGGGHHHHHHHHHHTCCC-SEEEEECC
T ss_pred             CCCcceeeeehhhccccC-CCC--CCHHHHHHHHHHHHHHHHHHHhcCCC-CCEEEEcC
Confidence            489999999999999999 999  55568899999999999998888875 99999975

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=98.80  E-value=2.7e-12  Score=91.86  Aligned_cols=66  Identities=12%  Similarity=0.083  Sum_probs=55.2

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHH-hcCCCCCcEEEEEc-CCchHHHHHHH
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFE-VCSPKQGEYVFVSA-ASGAVGQLVGQ   70 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~-~~~~~~~~~vlI~g-a~g~~G~~avq   70 (241)
                      +|+|+||+++++++++++ |++  ++ ++++++...+|||+++.. ..++++|++|+|+| |+|++|++++|
T Consensus       107 ~g~~aey~~v~~~~~~~i-P~~--~~-~~~a~~~~~~ta~~~l~~~~~~~~~g~~vli~gaa~~gvG~~~iQ  174 (175)
T d1gu7a1         107 FGTWRTHALGNDDDFIKL-PNP--AQ-SKANGKPNGLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLIT  174 (175)
T ss_dssp             CCCSBSEEEEEGGGEEEE-CCH--HH-HHHTTCSCCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEE
T ss_pred             cccccceeeehhhhccCC-Ccc--ch-hhhhccchHHHHHHHHHHHhcCCCCCCEEEEECccchhhhheEEe
Confidence            478999999999999999 988  66 355667788999999864 35799999999998 55789998776

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=98.76  E-value=1.7e-09  Score=72.88  Aligned_cols=54  Identities=15%  Similarity=0.120  Sum_probs=46.5

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEE
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVS   58 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~   58 (241)
                      +|+|+||++++++.++++ |++++.. ++|++++++.|||+++.+.+  +.|++||+.
T Consensus        78 ~G~~aey~~v~~~~~~~~-P~~~~~~-~aa~~~~~~~Ta~~al~~~g--~~g~tvl~l  131 (131)
T d1iz0a1          78 QGGLAERVAVPKGALLPL-PEGRPVV-GPVFPFAEAEAAFRALLDRG--HTGKVVVRL  131 (131)
T ss_dssp             SCCSBSEEEEEGGGCEEC-CTTCCCE-EEEEEGGGHHHHHHHTTCTT--CCBEEEEEC
T ss_pred             cCccceeeeeCHHHeEEc-cCCCCHH-HHHHHHHHHHHHHHHHHhcc--cCCCEEEEC
Confidence            489999999999999999 9996655 48899999999999997755  569999873

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=5.4e-09  Score=72.25  Aligned_cols=56  Identities=13%  Similarity=0.201  Sum_probs=50.2

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEE
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVS   58 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~   58 (241)
                      +|+||||++++++.++++ |++++.. ++|+++++++|+|+++...+...+|+++||+
T Consensus        95 ~G~~ae~~~v~~~~~~~i-P~~ls~~-~Aa~~~~~~~ta~~~~~~~g~~~~G~~vliL  150 (150)
T d1yb5a1          95 SGGYAEYALAADHTVYKL-PEKLKPV-IGSQYPLEKVAEAHENIIHGSGATGKMILLL  150 (150)
T ss_dssp             SCSSBSEEEEEGGGEEEC-CTTCCCC-EEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             cccccccccccccccccc-cCCCCHH-HHHHhhhhhhhehhhheEEcCcccCCEEEEC
Confidence            489999999999999999 9995555 4889999999999999888899999999984

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=98.66  E-value=1.9e-07  Score=64.40  Aligned_cols=102  Identities=16%  Similarity=0.174  Sum_probs=78.0

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC-eeecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~-~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      .-+|+|.|+ |..|+.|+..|+.+|++|.+.+.+.++++.++..++.. .....+.. .+.+.+++     +|+|+.++-
T Consensus        32 pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~-~l~~~~~~-----aDivI~aal  104 (168)
T d1pjca1          32 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSA-EIETAVAE-----ADLLIGAVL  104 (168)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHH-HHHHHHHT-----CSEEEECCC
T ss_pred             CcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceeehhhhh-hHHHhhcc-----CcEEEEeee
Confidence            456999996 99999999999999999999999999999998444432 22222222 56666653     999999884


Q ss_pred             ---ch----hHHHHHHhhccCCEEEEEeeecccCCCC
Q 026217          131 ---GK----MLDAVLLNMRIQGRITLCGMISQYNNDK  160 (241)
Q Consensus       131 ---~~----~~~~~~~~l~~~G~~v~~g~~~~~~~~~  160 (241)
                         ..    .-+.+++.|++++.++.+....+.+++.
T Consensus       105 ipG~~aP~lIt~~mv~~Mk~GSVIVDvaidqGG~~Et  141 (168)
T d1pjca1         105 VPGRRAPILVPASLVEQMRTGSVIVDVAVDQGGCVET  141 (168)
T ss_dssp             CTTSSCCCCBCHHHHTTSCTTCEEEETTCTTCCSBTT
T ss_pred             cCCcccCeeecHHHHhhcCCCcEEEEeecCCCCcccc
Confidence               21    3578899999999999998766655443

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=98.63  E-value=1.4e-07  Score=70.40  Aligned_cols=182  Identities=18%  Similarity=0.204  Sum_probs=106.0

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC---eeecCCCchhHHHHHHHHC--CCCccEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEPDLDAALKRYF--PEGINIY  125 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~---~~i~~~~~~~~~~~i~~~~--~~~~d~v  125 (241)
                      +|.+++|+||++++|.+.++.+...|++|+++++++++.+.+.++++..   ...|..++.+..+.+.+..  -+++|++
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   82 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDIL   82 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCccee
Confidence            5789999999999999999999999999999999999988887677643   2345555323333333322  1479999


Q ss_pred             EeCCCch--------------------------hHHHHHHhhc--cCCEEEEEeeeccc-CCCCCC------------Cc
Q 026217          126 FENVGGK--------------------------MLDAVLLNMR--IQGRITLCGMISQY-NNDKPE------------GV  164 (241)
Q Consensus       126 ~d~~g~~--------------------------~~~~~~~~l~--~~G~~v~~g~~~~~-~~~~~~------------~~  164 (241)
                      ++++|..                          ..+.+++.+.  .+|+++.+++..+. +.+...            ..
T Consensus        83 VnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~~lt~  162 (243)
T d1q7ba_          83 VNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSK  162 (243)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHH
T ss_pred             hhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCCHHHHHHHHHHHHHHH
Confidence            9998731                          0234555553  36899999875542 111100            00


Q ss_pred             cChHHHhhcceEEEEeecccccchh-HHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCC---CcceEE
Q 026217          165 HNLTCLISKRIRMEGFLVPDYFHLY-PKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGR---NVGKQV  235 (241)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~---~~gk~v  235 (241)
                      .....+-.+++++.....+...... .....+..+.+.+.   .+..+.-.-+|+.++..+|.+.+   ..|.++
T Consensus       163 ~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~---~pl~R~~~pedvA~~v~fL~S~~s~~itGq~i  234 (243)
T d1q7ba_         163 SLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQ---VPAGRLGGAQEIANAVAFLASDEAAYITGETL  234 (243)
T ss_dssp             HHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHTT---CTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHhCccCeEEEEEecceEechhhhhhhhhHHHHHHhc---CCCCCCCCHHHHHHHHHHHhCchhcCCcCCeE
Confidence            0112333456777666655442111 11112222222221   11112234678888888887643   345543

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=98.60  E-value=6.5e-11  Score=83.34  Aligned_cols=61  Identities=16%  Similarity=0.177  Sum_probs=50.3

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchH
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAV   64 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~   64 (241)
                      +|+||||+++|++.++++ |++++.. +||+++..++|||.++.. .....+++|||.|++|++
T Consensus        98 ~G~~aey~~v~~~~l~~i-P~~ls~~-~Aa~~~~~~~ta~~~~~~-~~~~~~~~Vli~ga~G~v  158 (162)
T d1tt7a1          98 DGGLSEYASVPGDWLVPL-PQNLSLK-EAMVDQLLTIVDREVSLE-ETPGALKDILQNRIQGRV  158 (162)
T ss_dssp             CCSSBSSEEECGGGEEEC-CTTCCHH-HHHHSCSTTSEEEEECST-THHHHHHHTTTTCCSSEE
T ss_pred             ccccceEEEecHHHEEEC-CCCCCHH-HHHHHHHHHHHHHHHHHh-cCCCCCCEEEEECCcceE
Confidence            489999999999999999 9995555 489999999999988744 345566889999887754

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.57  E-value=1.2e-08  Score=73.39  Aligned_cols=55  Identities=15%  Similarity=0.049  Sum_probs=46.0

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCch-hHHHHHHHHHhcCCCCCcEEEEEc
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMP-GMTAYAGFFEVCSPKQGEYVFVSA   59 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~-~~ta~~~l~~~~~~~~~~~vlI~g   59 (241)
                      +|+||||+++++.+++++ |++++  .+.|++.++ +.|||+++ +.++++++++|+|..
T Consensus       132 ~Ggfaey~~v~~~~~~~i-P~~l~--~e~Aal~~~~~~ta~~~l-~~~~vk~g~~Vvv~~  187 (192)
T d1piwa1         132 QGGYANYVRVHEHFVVPI-PENIW--VETLPVGEAGVHEAFERM-EKGDVRYRFTLVGYD  187 (192)
T ss_dssp             CCSSBSEEEEEGGGEEEC-CTTCC--EEEEESSHHHHHHHHHHH-HHTCCSSEEEEECCH
T ss_pred             ccceeeEEEeehHHeEEC-CCCCC--HHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEEC
Confidence            489999999999999999 99954  445666665 67999999 568999999999864

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.57  E-value=9e-07  Score=66.14  Aligned_cols=182  Identities=14%  Similarity=0.093  Sum_probs=102.9

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----HcCCCe---eecCCCchhHHHHHHHHCC--CC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN----KFGFDE---AFNYKEEPDLDAALKRYFP--EG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~----~~g~~~---~i~~~~~~~~~~~i~~~~~--~~  121 (241)
                      +|.+++|+||++++|++.++.+...|++|+++++++++.+.+.+    +.|...   ..|-.++.++...+.+...  |+
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   83 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGK   83 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999999887654432    445432   2355454233333333221  37


Q ss_pred             ccEEEeCCCch--------------------------hHHHHHHhhcc--CCEEEEEeeecccCCCCCCCc---------
Q 026217          122 INIYFENVGGK--------------------------MLDAVLLNMRI--QGRITLCGMISQYNNDKPEGV---------  164 (241)
Q Consensus       122 ~d~v~d~~g~~--------------------------~~~~~~~~l~~--~G~~v~~g~~~~~~~~~~~~~---------  164 (241)
                      +|++++++|..                          ..+.++..|..  +|+++.++.........+...         
T Consensus        84 iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~~~Y~asKaal  163 (251)
T d1vl8a_          84 LDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGV  163 (251)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCccccchHHHHHhH
Confidence            99999999731                          02445556643  589999876443211111000         


Q ss_pred             -----cChHHHhhcceEEEEeecccccchh-HHHH--HHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCC---Ccce
Q 026217          165 -----HNLTCLISKRIRMEGFLVPDYFHLY-PKFL--EMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGR---NVGK  233 (241)
Q Consensus       165 -----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~---~~gk  233 (241)
                           .....+-.+++++.....+...... ...+  .+..+.+.+.   .+..+.-.-+|+.++..+|.+.+   ..|.
T Consensus       164 ~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~---~pl~R~~~pedvA~~v~fL~S~~a~~itG~  240 (251)
T d1vl8a_         164 ASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKR---IPLGRTGVPEDLKGVAVFLASEEAKYVTGQ  240 (251)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHT---CTTSSCBCGGGGHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhc---CCCCCCCCHHHHHHHHHHHhCchhCCCcCc
Confidence                 0112233456777776665442111 1111  1122222211   11222334678999999887643   3455


Q ss_pred             EE
Q 026217          234 QV  235 (241)
Q Consensus       234 ~v  235 (241)
                      ++
T Consensus       241 ~i  242 (251)
T d1vl8a_         241 II  242 (251)
T ss_dssp             EE
T ss_pred             EE
Confidence            44

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=98.51  E-value=2.8e-07  Score=68.60  Aligned_cols=80  Identities=9%  Similarity=0.172  Sum_probs=61.1

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe-eecCCCchhHHHHHHHHCC--CCccEEEe
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFP--EGINIYFE  127 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~i~~~~~--~~~d~v~d  127 (241)
                      .|.+++|+||++++|++.++.+...|++|+.+++++++.+.+.++++... ..|..++.++.+.+.+...  +++|++++
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVn   83 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH   83 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEEEE
Confidence            57899999999999999999999999999999999999888886777642 3455554233333332221  37999999


Q ss_pred             CCC
Q 026217          128 NVG  130 (241)
Q Consensus       128 ~~g  130 (241)
                      ++|
T Consensus        84 nAG   86 (242)
T d1ulsa_          84 YAG   86 (242)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            987

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=98.50  E-value=5.5e-07  Score=64.49  Aligned_cols=78  Identities=19%  Similarity=0.158  Sum_probs=58.7

Q ss_pred             CCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC-----CeeecCCCchhHHHHHHHHCCCCcc
Q 026217           49 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF-----DEAFNYKEEPDLDAALKRYFPEGIN  123 (241)
Q Consensus        49 ~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~-----~~~i~~~~~~~~~~~i~~~~~~~~d  123 (241)
                      --+|.+++|+||+|++|..+++.+...|++|+++++++++.+.+.+++..     ....|..+.    +.+.+.. +++|
T Consensus        20 ~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~----~~~~~~~-~~iD   94 (191)
T d1luaa1          20 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADD----ASRAEAV-KGAH   94 (191)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSH----HHHHHHT-TTCS
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccH----HHHHHHh-cCcC
Confidence            45889999999999999999999999999999999999888777644432     123444443    2333333 3599


Q ss_pred             EEEeCCCc
Q 026217          124 IYFENVGG  131 (241)
Q Consensus       124 ~v~d~~g~  131 (241)
                      ++|+++|.
T Consensus        95 ilin~Ag~  102 (191)
T d1luaa1          95 FVFTAGAI  102 (191)
T ss_dssp             EEEECCCT
T ss_pred             eeeecCcc
Confidence            99999873

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=98.50  E-value=5.3e-08  Score=66.91  Aligned_cols=55  Identities=7%  Similarity=0.126  Sum_probs=46.2

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchh-hhhcCchhHHHHHHHHHhcCCCCCcEEEE
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYY-TGILGMPGMTAYAGFFEVCSPKQGEYVFV   57 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~-~a~l~~~~~ta~~~l~~~~~~~~~~~vlI   57 (241)
                      .|+|+||++++.+.++++ |++++++.. +++++....++++++.+ .++++|++|||
T Consensus        91 ~G~~ae~~~v~~~~~~~~-P~~~~~~~a~a~~~~~~~~~~~~~l~~-~~~~~G~~VLI  146 (147)
T d1qora1          91 LGAYSSVHNIIADKAAIL-PAAIKVDVAEQQKYPLKDAQRAHEILE-SRATQGSSLLI  146 (147)
T ss_dssp             SCCSBSEEEEEGGGEEEC-CTTSCCCCCGGGEEEGGGHHHHHHHHH-TTCCCBCCEEE
T ss_pred             cccceeEEEEehHHeEEc-CcccchHHHHHHHHHHHHHHHHHHHHH-hCCCCCCEEEe
Confidence            489999999999999999 999766643 45677888888888865 68999999998

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.45  E-value=7.4e-07  Score=66.32  Aligned_cols=78  Identities=15%  Similarity=0.155  Sum_probs=60.4

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC--eeecCCCchhHHHHHHHHCCCCccEEEeC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD--EAFNYKEEPDLDAALKRYFPEGINIYFEN  128 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~--~~i~~~~~~~~~~~i~~~~~~~~d~v~d~  128 (241)
                      .|.++||+||++++|.+.++.+...|++|+++++++++.+.+.++++..  ...|..+. +-.+++.+.. +++|+++++
T Consensus         6 ~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~-g~iDilVnn   83 (244)
T d1pr9a_           6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDW-EATERALGSV-GPVDLLVNN   83 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCH-HHHHHHHTTC-CCCCEEEEC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCH-HHHHHHHHHh-CCceEEEec
Confidence            6899999999999999999999999999999999999988887676543  24455554 3223332222 379999998


Q ss_pred             CC
Q 026217          129 VG  130 (241)
Q Consensus       129 ~g  130 (241)
                      +|
T Consensus        84 Ag   85 (244)
T d1pr9a_          84 AA   85 (244)
T ss_dssp             CC
T ss_pred             cc
Confidence            87

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=98.44  E-value=4.3e-07  Score=68.17  Aligned_cols=80  Identities=13%  Similarity=0.240  Sum_probs=61.4

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe---eecCCCchhHHHHHHHHCC--CCccEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGINIY  125 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~---~i~~~~~~~~~~~i~~~~~--~~~d~v  125 (241)
                      +|.+++|+||++++|++.++.+...|++|+++++++++.+.+.+++|...   ..|..++.++...+.+...  |++|++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDil   83 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDIL   83 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccEE
Confidence            57899999999999999999999999999999999998888877887642   3355554233333333222  479999


Q ss_pred             EeCCC
Q 026217          126 FENVG  130 (241)
Q Consensus       126 ~d~~g  130 (241)
                      ++++|
T Consensus        84 VnnAg   88 (256)
T d1k2wa_          84 VNNAA   88 (256)
T ss_dssp             EECCC
T ss_pred             Eeecc
Confidence            99987

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.44  E-value=4.7e-07  Score=67.40  Aligned_cols=81  Identities=15%  Similarity=0.172  Sum_probs=60.8

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe---eecCCCchhHHHHHHHHCC--CCccEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGINIY  125 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~---~i~~~~~~~~~~~i~~~~~--~~~d~v  125 (241)
                      +|.+++|+||++++|++.++.+...|++|+.+++++++.+.+.++++...   ..|..++.++.+.+.+...  +++|++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idil   84 (244)
T d1nffa_           5 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL   84 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeEE
Confidence            67899999999999999999999999999999999999888876776421   2344443233333333222  379999


Q ss_pred             EeCCCc
Q 026217          126 FENVGG  131 (241)
Q Consensus       126 ~d~~g~  131 (241)
                      ++++|.
T Consensus        85 innAG~   90 (244)
T d1nffa_          85 VNNAGI   90 (244)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            999973

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=98.41  E-value=5.4e-07  Score=67.45  Aligned_cols=105  Identities=15%  Similarity=0.159  Sum_probs=73.5

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC---eeecCCCchhHHHHHHHHCC--CCccEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEPDLDAALKRYFP--EGINIY  125 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~---~~i~~~~~~~~~~~i~~~~~--~~~d~v  125 (241)
                      +|.+++|+||++++|++.++.+...|++|+.+++++++.+.+.++++..   ...|..++.++.+.+.+...  +++|++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   83 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL   83 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccEE
Confidence            5889999999999999999999999999999999999888877677643   23344443233333322211  379999


Q ss_pred             EeCCCch-----------h---------------HHHHHHhhc--cCCEEEEEeeecc
Q 026217          126 FENVGGK-----------M---------------LDAVLLNMR--IQGRITLCGMISQ  155 (241)
Q Consensus       126 ~d~~g~~-----------~---------------~~~~~~~l~--~~G~~v~~g~~~~  155 (241)
                      ++++|..           .               .+.++..+.  .+|+++.+++..+
T Consensus        84 VnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~  141 (254)
T d1hdca_          84 VNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAG  141 (254)
T ss_dssp             EECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             EecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchh
Confidence            9998731           0               133334333  3699999987664

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.41  E-value=1.2e-06  Score=65.16  Aligned_cols=78  Identities=13%  Similarity=0.098  Sum_probs=59.1

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC--eeecCCCchhHHHHHHHHCCCCccEEEeC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD--EAFNYKEEPDLDAALKRYFPEGINIYFEN  128 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~--~~i~~~~~~~~~~~i~~~~~~~~d~v~d~  128 (241)
                      .|.++||+||++++|.+.++.+...|++|+++++++++.+.+.++++..  ...|..+. +..+++.+.. |++|+++++
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~-g~iDilVnn   81 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDW-DATEKALGGI-GPVDLLVNN   81 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCH-HHHHHHHTTC-CCCSEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCH-HHHHHHHHHc-CCCeEEEEC
Confidence            5889999999999999999999999999999999999888777566542  23455554 3222222211 479999999


Q ss_pred             CC
Q 026217          129 VG  130 (241)
Q Consensus       129 ~g  130 (241)
                      +|
T Consensus        82 Ag   83 (242)
T d1cyda_          82 AA   83 (242)
T ss_dssp             CC
T ss_pred             Cc
Confidence            87

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=98.41  E-value=1.2e-06  Score=61.26  Aligned_cols=106  Identities=13%  Similarity=0.068  Sum_probs=76.0

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeee-cCCC-c-----------------hhHHH
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAF-NYKE-E-----------------PDLDA  112 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i-~~~~-~-----------------~~~~~  112 (241)
                      .-+|+|+|| |..|+.|+..|+.+|++|.+.+.++++++.++ +++...+- +... .                 ....+
T Consensus        29 pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~-~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~  106 (183)
T d1l7da1          29 PARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVE-SLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  106 (183)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHH-HTTCEECCC-----------------------CCHHH
T ss_pred             CcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHH-HhhcceEEEeccccccccccccchhhcCHHHHHHHHH
Confidence            346999997 99999999999999999999999999999999 88764321 0000 0                 01112


Q ss_pred             HHHHHCCCCccEEEeCCC---ch----hHHHHHHhhccCCEEEEEeeecccCCCC
Q 026217          113 ALKRYFPEGINIYFENVG---GK----MLDAVLLNMRIQGRITLCGMISQYNNDK  160 (241)
Q Consensus       113 ~i~~~~~~~~d~v~d~~g---~~----~~~~~~~~l~~~G~~v~~g~~~~~~~~~  160 (241)
                      .+.+... ..|+|+-++-   ..    .-+.+++.|++|+.++.+....+.+++.
T Consensus       107 ~l~~~l~-~aDlVI~talipG~~aP~lit~~mv~~Mk~GSVIVDvaidqGGn~Et  160 (183)
T d1l7da1         107 AVLKELV-KTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPL  160 (183)
T ss_dssp             HHHHHHT-TCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTCSSTT
T ss_pred             HHHHHHH-hhhhheeeeecCCcccceeehHHHHHhcCCCcEEEEEeecCCCcccc
Confidence            2222111 4999999873   22    3578999999999999998877665553

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=98.41  E-value=5e-07  Score=68.59  Aligned_cols=80  Identities=19%  Similarity=0.235  Sum_probs=60.1

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe---eecCCCchhHHHHHHHHCC--CCccEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGINIY  125 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~---~i~~~~~~~~~~~i~~~~~--~~~d~v  125 (241)
                      .|.+++|+||++++|++.++.+...|++|+++++++++.+.+.+++|...   ..|..+..+..+.+.+...  +++|++
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idil   83 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTL   83 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCcccc
Confidence            58999999999999999999999999999999999999887776776532   2344443233333332221  379999


Q ss_pred             EeCCC
Q 026217          126 FENVG  130 (241)
Q Consensus       126 ~d~~g  130 (241)
                      ++++|
T Consensus        84 vnnAG   88 (276)
T d1bdba_          84 IPNAG   88 (276)
T ss_dssp             ECCCC
T ss_pred             ccccc
Confidence            99887

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.40  E-value=7.6e-07  Score=66.49  Aligned_cols=105  Identities=15%  Similarity=0.147  Sum_probs=74.1

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe--eecCCCchhHHHHHHHHCC--CCccEEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFP--EGINIYF  126 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~--~i~~~~~~~~~~~i~~~~~--~~~d~v~  126 (241)
                      .|.+++|+||++++|.+.++.+...|++|+++++++++.+.+.++++...  ..|..+..++.+.+.+...  +++|+++
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilV   84 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV   84 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            58899999999999999999999999999999999999988885665422  2344443233333333222  4799999


Q ss_pred             eCCCc-h---h-----------------------HHHHHHhhcc-CCEEEEEeeecc
Q 026217          127 ENVGG-K---M-----------------------LDAVLLNMRI-QGRITLCGMISQ  155 (241)
Q Consensus       127 d~~g~-~---~-----------------------~~~~~~~l~~-~G~~v~~g~~~~  155 (241)
                      +++|. .   .                       .+.++..|+. +|+++.+++..+
T Consensus        85 nnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~  141 (250)
T d1ydea1          85 NNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVG  141 (250)
T ss_dssp             ECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHH
T ss_pred             ecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccc
Confidence            99872 1   0                       1334445544 689999887554

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=98.37  E-value=1e-06  Score=66.51  Aligned_cols=80  Identities=19%  Similarity=0.312  Sum_probs=59.6

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC---e--eecCCCchhHHHHHHHHCC--CCcc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD---E--AFNYKEEPDLDAALKRYFP--EGIN  123 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~---~--~i~~~~~~~~~~~i~~~~~--~~~d  123 (241)
                      .|.++||+||++++|++.++.+...|++|+++++++++.+.+.++++..   .  ..|..++.++...+.+...  +++|
T Consensus         5 ~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   84 (268)
T d2bgka1           5 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLD   84 (268)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCcc
Confidence            6889999999999999999999999999999999999888887676542   1  2244443233333332221  4799


Q ss_pred             EEEeCCC
Q 026217          124 IYFENVG  130 (241)
Q Consensus       124 ~v~d~~g  130 (241)
                      ++++++|
T Consensus        85 ~lVnnAG   91 (268)
T d2bgka1          85 IMFGNVG   91 (268)
T ss_dssp             EEEECCC
T ss_pred             eeccccc
Confidence            9999887

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=98.35  E-value=8.9e-07  Score=66.24  Aligned_cols=105  Identities=19%  Similarity=0.172  Sum_probs=75.0

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCee---ecCCCchhHHHHHHHHCC--CCccEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEA---FNYKEEPDLDAALKRYFP--EGINIY  125 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~---i~~~~~~~~~~~i~~~~~--~~~d~v  125 (241)
                      +|.+++|+||++++|.+.++.+...|++|+.+++++++.+.+.++++....   .|..+..+....+.....  +++|++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDil   84 (253)
T d1hxha_           5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL   84 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCeE
Confidence            678999999999999999999999999999999999998888778875432   233443133322222221  479999


Q ss_pred             EeCCCch-----------h---------------HHHHHHhhc-cCCEEEEEeeecc
Q 026217          126 FENVGGK-----------M---------------LDAVLLNMR-IQGRITLCGMISQ  155 (241)
Q Consensus       126 ~d~~g~~-----------~---------------~~~~~~~l~-~~G~~v~~g~~~~  155 (241)
                      ++++|..           .               .+.++..|+ .+|+++.+++..+
T Consensus        85 VnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~  141 (253)
T d1hxha_          85 VNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSS  141 (253)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGG
T ss_pred             EecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhh
Confidence            9999831           0               234455564 4799999987654

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=98.35  E-value=8.4e-07  Score=66.17  Aligned_cols=105  Identities=13%  Similarity=0.113  Sum_probs=74.1

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe-eecCCCchhHHHHHHHHCC--CCccEEE
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFP--EGINIYF  126 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~i~~~~~--~~~d~v~  126 (241)
                      -+|.++||+||++++|++.++.+...|++|++++++++..+.++ +.+... ..|-.+..+..+.+.+...  |++|+++
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLV   81 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAE-AIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLV   81 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHH-HHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEE
Confidence            36889999999999999999999999999999999988877776 777642 2344443233333333222  4799999


Q ss_pred             eCCCch-----------h---------------HHHHHHhhcc--CCEEEEEeeecc
Q 026217          127 ENVGGK-----------M---------------LDAVLLNMRI--QGRITLCGMISQ  155 (241)
Q Consensus       127 d~~g~~-----------~---------------~~~~~~~l~~--~G~~v~~g~~~~  155 (241)
                      +++|..           .               .+.++..|.+  +|+++.++....
T Consensus        82 nnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~  138 (248)
T d2d1ya1          82 NNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQG  138 (248)
T ss_dssp             ECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGG
T ss_pred             EeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccc
Confidence            998731           1               2344455644  589998887554

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=98.34  E-value=1.1e-06  Score=65.66  Aligned_cols=80  Identities=14%  Similarity=0.164  Sum_probs=59.5

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC-----eeecCCCchhHH---HHHHHHCCCCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-----EAFNYKEEPDLD---AALKRYFPEGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~-----~~i~~~~~~~~~---~~i~~~~~~~~  122 (241)
                      .|.+++|+||++++|++.++.+...|++|+++++++++.+.+.++++..     ...|..++.+..   +.+.+.. |++
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-G~i   83 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAF-GPV   83 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHH-SSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHh-CCc
Confidence            5889999999999999999999999999999999999888877666532     123444432222   3333222 479


Q ss_pred             cEEEeCCCc
Q 026217          123 NIYFENVGG  131 (241)
Q Consensus       123 d~v~d~~g~  131 (241)
                      |++++++|.
T Consensus        84 DiLVnnAg~   92 (251)
T d1zk4a1          84 STLVNNAGI   92 (251)
T ss_dssp             CEEEECCCC
T ss_pred             eEEEecccc
Confidence            999999973

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.34  E-value=2e-07  Score=66.44  Aligned_cols=54  Identities=13%  Similarity=0.116  Sum_probs=42.0

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEc
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSA   59 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~g   59 (241)
                      +|+|+||++++.++++++ |++  ++++.|+ ..++++|++++ +..++++|++|+|..
T Consensus       125 ~G~~aey~~~~~~~~~~l-P~~--~~~~~aa-~~pl~~a~~a~-~~~~~~~G~~VlIg~  178 (185)
T d1pl8a1         125 DGNLCRFYKHNAAFCYKL-PDN--VKPLVTH-RFPLEKALEAF-ETFKKGLGLKIMLKC  178 (185)
T ss_dssp             CCSCBSEEEEEGGGEEEC-CTT--CGGGEEE-EEEGGGHHHHH-HHHHTTCCSEEEEEC
T ss_pred             cccceEEEEEchHHEEEC-CCC--CCHHHHH-HHHHHHHHHHH-HHhCCCCCCEEEEEe
Confidence            478999999999999999 999  4544333 24566788887 456889999999943

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=98.34  E-value=1.8e-06  Score=64.73  Aligned_cols=81  Identities=17%  Similarity=0.245  Sum_probs=59.9

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCCe---eecCCCchh---HHHHHHHHCCCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDE---AFNYKEEPD---LDAALKRYFPEG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~---~g~~~---~i~~~~~~~---~~~~i~~~~~~~  121 (241)
                      +|.++||+||++++|.+.++.+...|++|+.+++++++.+.+.++   .+...   ..|..+..+   +.+++.+..++.
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~   84 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK   84 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            688999999999999999999999999999999998876665533   33322   235554312   334444555567


Q ss_pred             ccEEEeCCCc
Q 026217          122 INIYFENVGG  131 (241)
Q Consensus       122 ~d~v~d~~g~  131 (241)
                      +|++++++|.
T Consensus        85 idilinnag~   94 (258)
T d1ae1a_          85 LNILVNNAGV   94 (258)
T ss_dssp             CCEEEECCCC
T ss_pred             cEEEeccccc
Confidence            9999998873

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.33  E-value=8.6e-07  Score=65.93  Aligned_cols=81  Identities=19%  Similarity=0.199  Sum_probs=58.8

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC---eeecCCCchhHHHHHHHHC--CCCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEPDLDAALKRYF--PEGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~~i~~~~~~~~~~~i~~~~--~~~~  122 (241)
                      .|.+++|+||++++|...+..+...|++|+++++++++.+.+.+++   |..   ...|..+..+....++...  -|.+
T Consensus         6 ~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i   85 (244)
T d1yb1a_           6 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDV   85 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            6899999999999999999999999999999999999877665443   322   2345555423333333321  2379


Q ss_pred             cEEEeCCCc
Q 026217          123 NIYFENVGG  131 (241)
Q Consensus       123 d~v~d~~g~  131 (241)
                      |++++++|.
T Consensus        86 dilinnag~   94 (244)
T d1yb1a_          86 SILVNNAGV   94 (244)
T ss_dssp             SEEEECCCC
T ss_pred             ceeEeeccc
Confidence            999999983

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=98.32  E-value=1.4e-06  Score=64.66  Aligned_cols=80  Identities=10%  Similarity=0.144  Sum_probs=61.2

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe---eecCCCchhHHHHHHHHCC--CCccEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGINIY  125 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~---~i~~~~~~~~~~~i~~~~~--~~~d~v  125 (241)
                      .|.+++|+||++++|.+.++-+...|++|+.+.++.++.+.+.++++...   ..|.+++.++.+.+.+...  +++|++
T Consensus         4 ~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDiL   83 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV   83 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEe
Confidence            68899999999999999999999999999999999998888876787542   2345544233333333322  379999


Q ss_pred             EeCCC
Q 026217          126 FENVG  130 (241)
Q Consensus       126 ~d~~g  130 (241)
                      ++++|
T Consensus        84 innAg   88 (241)
T d2a4ka1          84 AHFAG   88 (241)
T ss_dssp             EEGGG
T ss_pred             ccccc
Confidence            99887

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.31  E-value=9.6e-07  Score=65.76  Aligned_cols=78  Identities=17%  Similarity=0.290  Sum_probs=60.7

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC-eeecCCCchhHHHHHHHHCCCCccEEEeCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEPDLDAALKRYFPEGINIYFENV  129 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~-~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~  129 (241)
                      .|.++||+||++++|.+.++.+...|++|+++++++++.+.+.+..+.. ...|.... +..+...+.. +++|+++++.
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~-~~id~lVn~a   82 (245)
T d2ag5a1           5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKK-KQIDQFANEV-ERLDVLFNVA   82 (245)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCH-HHHHHHHHHC-SCCSEEEECC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeecccc-cccccccccc-ccceeEEecc
Confidence            6789999999999999999999999999999999999888877444442 24444444 4555554443 3699999998


Q ss_pred             C
Q 026217          130 G  130 (241)
Q Consensus       130 g  130 (241)
                      |
T Consensus        83 g   83 (245)
T d2ag5a1          83 G   83 (245)
T ss_dssp             C
T ss_pred             c
Confidence            7

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.31  E-value=1.8e-06  Score=64.64  Aligned_cols=105  Identities=16%  Similarity=0.137  Sum_probs=72.0

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC----C----eeecCCCchhHHHHHHHHCC--C
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF----D----EAFNYKEEPDLDAALKRYFP--E  120 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~----~----~~i~~~~~~~~~~~i~~~~~--~  120 (241)
                      .|.+++|+||++++|++.++.+...|++|+++++++++.+.+.+++..    .    ...|..+..++.+.+.+...  |
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            478999999999999999999999999999999999887766545421    1    12355554233333333322  3


Q ss_pred             CccEEEeCCCc---hh---------------HHHHHHhhcc-----CCEEEEEeeecc
Q 026217          121 GINIYFENVGG---KM---------------LDAVLLNMRI-----QGRITLCGMISQ  155 (241)
Q Consensus       121 ~~d~v~d~~g~---~~---------------~~~~~~~l~~-----~G~~v~~g~~~~  155 (241)
                      ++|++++++|.   ..               ...++..+.+     +|+++.+++..+
T Consensus        82 ~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~  139 (254)
T d2gdza1          82 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAG  139 (254)
T ss_dssp             CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG
T ss_pred             CcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhh
Confidence            79999999983   11               1334444533     478999887654

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=98.31  E-value=1.9e-07  Score=63.83  Aligned_cols=41  Identities=12%  Similarity=0.048  Sum_probs=35.9

Q ss_pred             CCccceEEeecCCceeeecCCCCCcchhhhhcCchhHHHHHHH
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGF   43 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l   43 (241)
                      +|+||||+++|+++++++ |+++++. ++|++++++.||+.++
T Consensus        95 ~G~~Aey~~v~~~~vv~l-P~~ls~~-eAA~l~~a~~tA~~~~  135 (146)
T d1o89a1          95 WGGLAEQARVKGDWLVAM-PQGQAAK-EISLSEAPNFAEAIIN  135 (146)
T ss_dssp             CCSSBSEEEECGGGCEEC-CTTSCCE-EECGGGHHHHHHHHHT
T ss_pred             CCcceeeeeeeeeeEEEC-CCCCCHH-HHHHHHHHHHHHHHHH
Confidence            599999999999999999 9996666 4889999999987666

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=98.30  E-value=1.4e-06  Score=65.36  Aligned_cols=80  Identities=15%  Similarity=0.245  Sum_probs=57.9

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC---eeecCCCchhHHHHHHHHCC--CCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEPDLDAALKRYFP--EGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~~i~~~~~~~~~~~i~~~~~--~~~  122 (241)
                      .|.+++|+||++++|++.++.+...|++|+++++++++.+.+.+++   |..   ...|..++.++.+.+.....  |++
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI   83 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            5889999999999999999999999999999999998877665444   332   12344443233333333221  479


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |++++++|
T Consensus        84 DilVnnaG   91 (260)
T d1zema1          84 DFLFNNAG   91 (260)
T ss_dssp             CEEEECCC
T ss_pred             Ceehhhhc
Confidence            99999887

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.28  E-value=1e-06  Score=66.75  Aligned_cols=101  Identities=19%  Similarity=0.317  Sum_probs=66.6

Q ss_pred             CcEE-EEEcCCchHHHHHHH-HHHHcCCEEEEEeCCHHHHHHHHHHc---CCC-e--eecCCCchh---HHHHHHHHCCC
Q 026217           52 GEYV-FVSAASGAVGQLVGQ-FAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEPD---LDAALKRYFPE  120 (241)
Q Consensus        52 ~~~v-lI~ga~g~~G~~avq-la~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~--~i~~~~~~~---~~~~i~~~~~~  120 (241)
                      |.+| ||+||++|+|+++++ +++..|++|+.+++++++.+.+.+++   +.. .  ..|..+..+   +.+++.+.. +
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~-g   80 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY-G   80 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhc-C
Confidence            4455 899999999998776 45556999999999998877665444   322 1  234444312   333343322 3


Q ss_pred             CccEEEeCCCch-----------h---------------HHHHHHhhccCCEEEEEeee
Q 026217          121 GINIYFENVGGK-----------M---------------LDAVLLNMRIQGRITLCGMI  153 (241)
Q Consensus       121 ~~d~v~d~~g~~-----------~---------------~~~~~~~l~~~G~~v~~g~~  153 (241)
                      ++|++++++|-.           .               .+..+..|++.|+++.++..
T Consensus        81 ~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~  139 (275)
T d1wmaa1          81 GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSI  139 (275)
T ss_dssp             SEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCH
T ss_pred             CcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccc
Confidence            799999999831           1               23345566778999988764

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.28  E-value=1.3e-06  Score=65.47  Aligned_cols=81  Identities=23%  Similarity=0.388  Sum_probs=58.0

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CC-Ce----eecCCCchhHHHHHHHHCC--C
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GF-DE----AFNYKEEPDLDAALKRYFP--E  120 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~-~~----~i~~~~~~~~~~~i~~~~~--~  120 (241)
                      +|.++||+||++++|++.++.+...|++|+.+.+++++.+.+.+++   +. ..    ..|-.++.+..+.+.....  +
T Consensus         9 k~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g   88 (257)
T d1xg5a_           9 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS   88 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            5789999999999999999999999999999999998877765343   22 12    2344554233333333221  4


Q ss_pred             CccEEEeCCCc
Q 026217          121 GINIYFENVGG  131 (241)
Q Consensus       121 ~~d~v~d~~g~  131 (241)
                      ++|++++++|.
T Consensus        89 ~iD~lVnnAg~   99 (257)
T d1xg5a_          89 GVDICINNAGL   99 (257)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEecccc
Confidence            79999999873

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=98.27  E-value=3.2e-06  Score=63.33  Aligned_cols=105  Identities=14%  Similarity=0.209  Sum_probs=72.0

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC---eeecCCCchhHH---HHHHHHCCCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEPDLD---AALKRYFPEG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~~i~~~~~~~~~---~~i~~~~~~~  121 (241)
                      .|.+++|+||++++|++.++.+...|++|+++++++++.+.+.+++   |..   ...|..++.+..   +++.+..+++
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~   86 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK   86 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCC
Confidence            6889999999999999999999999999999999998877665443   322   123444432333   3333333447


Q ss_pred             ccEEEeCCCch-----------h---------------HHHHHHhhc--cCCEEEEEeeecc
Q 026217          122 INIYFENVGGK-----------M---------------LDAVLLNMR--IQGRITLCGMISQ  155 (241)
Q Consensus       122 ~d~v~d~~g~~-----------~---------------~~~~~~~l~--~~G~~v~~g~~~~  155 (241)
                      +|++++++|..           .               .+.+...+.  .+|+++.+++..+
T Consensus        87 idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~  148 (259)
T d2ae2a_          87 LNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSG  148 (259)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGG
T ss_pred             ceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccccc
Confidence            99999998731           0               133444443  3689999987654

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=98.26  E-value=1.5e-06  Score=65.66  Aligned_cols=80  Identities=15%  Similarity=0.272  Sum_probs=57.6

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CC--C----eeecCCCchhHHHHHHHHCC--
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GF--D----EAFNYKEEPDLDAALKRYFP--  119 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~--~----~~i~~~~~~~~~~~i~~~~~--  119 (241)
                      +|.+++|+||++++|.+.++.+...|++|+++++++++.+.+.+++   +.  .    ...|..++.++...+.....  
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~   83 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF   83 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            5789999999999999999999999999999999998877766443   22  1    12344444233333333222  


Q ss_pred             CCccEEEeCCC
Q 026217          120 EGINIYFENVG  130 (241)
Q Consensus       120 ~~~d~v~d~~g  130 (241)
                      |++|++++++|
T Consensus        84 g~iDilvnnAG   94 (272)
T d1xkqa_          84 GKIDVLVNNAG   94 (272)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCceEEEeCCc
Confidence            47999999987

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.25  E-value=2e-06  Score=64.53  Aligned_cols=81  Identities=16%  Similarity=0.325  Sum_probs=58.7

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC---eeecCCCchhHH---HHHHHHCCCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEPDLD---AALKRYFPEG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~~i~~~~~~~~~---~~i~~~~~~~  121 (241)
                      +|.+++|+||++++|++.++.+...|++|+.+++++++.+.+.+++   +..   ...|..++.+..   +.+.+..++.
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~   86 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK   86 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCC
Confidence            5889999999999999999999999999999999998877665443   221   233444432332   3333333457


Q ss_pred             ccEEEeCCCc
Q 026217          122 INIYFENVGG  131 (241)
Q Consensus       122 ~d~v~d~~g~  131 (241)
                      +|++++++|.
T Consensus        87 idilvnnAG~   96 (259)
T d1xq1a_          87 LDILINNLGA   96 (259)
T ss_dssp             CSEEEEECCC
T ss_pred             cccccccccc
Confidence            9999999873

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.21  E-value=1.5e-06  Score=65.03  Aligned_cols=81  Identities=20%  Similarity=0.307  Sum_probs=57.3

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCCe---eecCCCchhHHHHHHHHCC--CCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDE---AFNYKEEPDLDAALKRYFP--EGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~---~g~~~---~i~~~~~~~~~~~i~~~~~--~~~  122 (241)
                      +|.+++|+||++++|.+.++.+...|++|+++++++++.+.+.++   .|...   ..|..++.++...+.....  +++
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~i   89 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKV   89 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            688999999999999999999999999999999998877665433   34321   2344443133222222211  379


Q ss_pred             cEEEeCCCc
Q 026217          123 NIYFENVGG  131 (241)
Q Consensus       123 d~v~d~~g~  131 (241)
                      |++++++|.
T Consensus        90 DilvnnAG~   98 (255)
T d1fmca_          90 DILVNNAGG   98 (255)
T ss_dssp             CEEEECCCC
T ss_pred             CEeeeCCcC
Confidence            999999873

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=98.21  E-value=4.1e-06  Score=62.71  Aligned_cols=80  Identities=15%  Similarity=0.199  Sum_probs=56.6

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CC-Ce----eecCCCchhHHHHHHHHCC--C
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GF-DE----AFNYKEEPDLDAALKRYFP--E  120 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~-~~----~i~~~~~~~~~~~i~~~~~--~  120 (241)
                      .|.+++|+||++++|++.++.+...|++|+++++++++.+.+.+++   +. ..    ..|..++.++...+.+...  |
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   82 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG   82 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhC
Confidence            5789999999999999999999999999999999988776654332   21 12    2355554233333333222  3


Q ss_pred             CccEEEeCCC
Q 026217          121 GINIYFENVG  130 (241)
Q Consensus       121 ~~d~v~d~~g  130 (241)
                      ++|++++++|
T Consensus        83 ~iDiLVnnAG   92 (258)
T d1iy8a_          83 RIDGFFNNAG   92 (258)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCc
Confidence            7999999887

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=98.20  E-value=6.2e-05  Score=51.70  Aligned_cols=79  Identities=16%  Similarity=0.188  Sum_probs=59.7

Q ss_pred             HHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCc
Q 026217           44 FEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGI  122 (241)
Q Consensus        44 ~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~  122 (241)
                      .+..+--.+.+|||.|+ |.+|..+++.+...|+ +++++.|+.++.+.+.+++|.. +++++   ++.+.+.     .+
T Consensus        16 ~~~~~~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~-~~~~~---~~~~~l~-----~~   85 (159)
T d1gpja2          16 ERELGSLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-AVRFD---ELVDHLA-----RS   85 (159)
T ss_dssp             HHHHSCCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-ECCGG---GHHHHHH-----TC
T ss_pred             HHHhCCcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcc-cccch---hHHHHhc-----cC
Confidence            34444447788999997 9999999999999998 7999999987776555588853 44443   5555555     49


Q ss_pred             cEEEeCCCch
Q 026217          123 NIYFENVGGK  132 (241)
Q Consensus       123 d~v~d~~g~~  132 (241)
                      |+||.|+++.
T Consensus        86 Divi~atss~   95 (159)
T d1gpja2          86 DVVVSATAAP   95 (159)
T ss_dssp             SEEEECCSSS
T ss_pred             CEEEEecCCC
Confidence            9999999853

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.19  E-value=7.7e-06  Score=61.68  Aligned_cols=104  Identities=20%  Similarity=0.288  Sum_probs=69.4

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHH---HcCCCe---eecCCCchhHHHHHHHHCC--CC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS-KDKVDLLKN---KFGFDE---AFNYKEEPDLDAALKRYFP--EG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~-~~~~~~~~~---~~g~~~---~i~~~~~~~~~~~i~~~~~--~~  121 (241)
                      .|.+++|+||++++|.+.++.+...|++|++++++ ++..+.+.+   +.|.+.   ..|..++.++...+.+...  ++
T Consensus        17 ~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   96 (272)
T d1g0oa_          17 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGK   96 (272)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            47899999999999999999999999999998866 343333321   445432   2344443234433333322  37


Q ss_pred             ccEEEeCCCch--------------------------hHHHHHHhhccCCEEEEEeeec
Q 026217          122 INIYFENVGGK--------------------------MLDAVLLNMRIQGRITLCGMIS  154 (241)
Q Consensus       122 ~d~v~d~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~  154 (241)
                      +|+++++.|..                          ..+.+...|..+|+++.++...
T Consensus        97 idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~  155 (272)
T d1g0oa_          97 LDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSIT  155 (272)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGG
T ss_pred             CCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccc
Confidence            99999988731                          1245666777889988887543

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=98.19  E-value=2.5e-06  Score=63.85  Aligned_cols=79  Identities=15%  Similarity=0.281  Sum_probs=56.2

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCC---eeecCCCchhHHHHHHHHCC--CCcc
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFD---EAFNYKEEPDLDAALKRYFP--EGIN  123 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~---~g~~---~~i~~~~~~~~~~~i~~~~~--~~~d  123 (241)
                      |..+||+||++++|++.++.+...|++|+++++++++.+.+.++   .|..   ...|-.++.++...+.....  +++|
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD   81 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD   81 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            56789999999999999999999999999999998877665533   3432   12344444233333333221  4799


Q ss_pred             EEEeCCC
Q 026217          124 IYFENVG  130 (241)
Q Consensus       124 ~v~d~~g  130 (241)
                      ++++++|
T Consensus        82 ilVnnAG   88 (257)
T d2rhca1          82 VLVNNAG   88 (257)
T ss_dssp             EEEECCC
T ss_pred             EEEeccc
Confidence            9999987

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=98.19  E-value=2.1e-06  Score=64.60  Aligned_cols=80  Identities=13%  Similarity=0.253  Sum_probs=57.4

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC------eeecCCCchhHHHHHHHHCC--
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD------EAFNYKEEPDLDAALKRYFP--  119 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~------~~i~~~~~~~~~~~i~~~~~--  119 (241)
                      +|.+++|+||++++|++.++.+...|++|+++++++++.+.+.+++   +..      ...|..+..+..+.+.....  
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   83 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF   83 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            6789999999999999999999999999999999998877665443   221      12355444233333333221  


Q ss_pred             CCccEEEeCCC
Q 026217          120 EGINIYFENVG  130 (241)
Q Consensus       120 ~~~d~v~d~~g  130 (241)
                      +++|++++++|
T Consensus        84 g~iDilvnnAG   94 (264)
T d1spxa_          84 GKLDILVNNAG   94 (264)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEeecccc
Confidence            47999999987

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.18  E-value=2.6e-06  Score=65.15  Aligned_cols=82  Identities=17%  Similarity=0.242  Sum_probs=57.7

Q ss_pred             CCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc--------CCC---eeecCCCchhHHHHHHHH
Q 026217           49 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF--------GFD---EAFNYKEEPDLDAALKRY  117 (241)
Q Consensus        49 ~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~--------g~~---~~i~~~~~~~~~~~i~~~  117 (241)
                      .-+|.+++|+||++++|++.++.+...|++|+++++++++.+.+.+++        +..   ...|..+..++...+.+.
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~   88 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   88 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence            347899999999999999999999999999999999988776554343        111   123444432333333332


Q ss_pred             CC--CCccEEEeCCC
Q 026217          118 FP--EGINIYFENVG  130 (241)
Q Consensus       118 ~~--~~~d~v~d~~g  130 (241)
                      ..  +++|++++++|
T Consensus        89 ~~~~G~iDiLVnnAg  103 (297)
T d1yxma1          89 LDTFGKINFLVNNGG  103 (297)
T ss_dssp             HHHHSCCCEEEECCC
T ss_pred             HHHhCCeEEEEeecc
Confidence            21  37999999987

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.18  E-value=4.2e-07  Score=67.39  Aligned_cols=99  Identities=14%  Similarity=0.192  Sum_probs=64.1

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCC--c---hhHHHHHHHHCCC-CccE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKE--E---PDLDAALKRYFPE-GINI  124 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~--~---~~~~~~i~~~~~~-~~d~  124 (241)
                      +|.+|||+||++++|++.++.+...|++|+.+++++.+...      ....+....  .   ..+...+.+..+. ++|+
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~   74 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEAS------ASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDA   74 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSS------EEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc------ccceeecccCcHHHHHHHHHHHHHHhCCCCceE
Confidence            47899999999999999999999999999999876432110      011111111  1   0223333333333 7999


Q ss_pred             EEeCCCc----h--------h---------------HHHHHHhhccCCEEEEEeeecc
Q 026217          125 YFENVGG----K--------M---------------LDAVLLNMRIQGRITLCGMISQ  155 (241)
Q Consensus       125 v~d~~g~----~--------~---------------~~~~~~~l~~~G~~v~~g~~~~  155 (241)
                      +++++|.    .        .               .+.++..++++|+++.++....
T Consensus        75 lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~  132 (236)
T d1dhra_          75 ILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAA  132 (236)
T ss_dssp             EEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred             EEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHH
Confidence            9999872    1        0               1335556788899999987654

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=98.17  E-value=2.3e-06  Score=64.73  Aligned_cols=80  Identities=19%  Similarity=0.334  Sum_probs=57.1

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC--e----eecCCCchhHHHHHHHHCC--
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD--E----AFNYKEEPDLDAALKRYFP--  119 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~--~----~i~~~~~~~~~~~i~~~~~--  119 (241)
                      +|.+++|+||++++|++.++.+...|++|+++++++++.+.+.+++   |..  .    ..|..++.++.+.+.....  
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF   82 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            5889999999999999999999999999999999988877665333   321  1    2354444233333332221  


Q ss_pred             CCccEEEeCCC
Q 026217          120 EGINIYFENVG  130 (241)
Q Consensus       120 ~~~d~v~d~~g  130 (241)
                      |++|++++++|
T Consensus        83 G~iDilVnnAG   93 (274)
T d1xhla_          83 GKIDILVNNAG   93 (274)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCceEEEeecc
Confidence            37999999887

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=98.15  E-value=3.1e-06  Score=63.11  Aligned_cols=182  Identities=14%  Similarity=0.141  Sum_probs=101.6

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC---eeecCCCchhHHHHHHHHC--CCCc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEPDLDAALKRYF--PEGI  122 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~~i~~~~~~~~~~~i~~~~--~~~~  122 (241)
                      ++..++|+||++++|++.++.+...|++|+++++++++.+.+.+++   |..   ...|..++.++...+.+..  -|++
T Consensus         9 enKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~i   88 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV   88 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Confidence            4788999999999999999999999999999999988876665443   432   2335555423333333221  1479


Q ss_pred             cEEEeCCCch-----------h---------------HHHHHHhhc--cCCEEEEEeeecccCCCCCCCc----------
Q 026217          123 NIYFENVGGK-----------M---------------LDAVLLNMR--IQGRITLCGMISQYNNDKPEGV----------  164 (241)
Q Consensus       123 d~v~d~~g~~-----------~---------------~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~----------  164 (241)
                      |+++++.|..           .               .+.++..+.  .+|+++.+++..+.........          
T Consensus        89 Dilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~  168 (251)
T d2c07a1          89 DILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIG  168 (251)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHH
T ss_pred             eeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCCHHHHHHHHHHHH
Confidence            9999988731           1               133444443  3699999987554211111000          


Q ss_pred             ---cChHHHhhcceEEEEeecccccch-hHHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhhcCC---CcceEE
Q 026217          165 ---HNLTCLISKRIRMEGFLVPDYFHL-YPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGR---NVGKQV  235 (241)
Q Consensus       165 ---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~~~~---~~gk~v  235 (241)
                         .....+-.+++++.....+..... ..+..++..+.+.+..   +..+.-.-+|+.++..+|.+.+   ..|.++
T Consensus       169 ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~---pl~R~~~pedvA~~v~fL~S~~s~~itG~~i  243 (251)
T d2c07a1         169 FTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNI---PAGRMGTPEEVANLACFLSSDKSGYINGRVF  243 (251)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHTTC---TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHhhhhCeEEEEEccCCEecccccccCHHHHHHHHhcC---CCCCCcCHHHHHHHHHHHhCchhCCCcCcEE
Confidence               011223455677766665544211 1112223333333221   1112234567888888887643   345544

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=98.14  E-value=3.1e-06  Score=63.53  Aligned_cols=80  Identities=13%  Similarity=0.133  Sum_probs=56.4

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----HcCCC---eeecCCCchhHHHHHHHHC--CCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN----KFGFD---EAFNYKEEPDLDAALKRYF--PEG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~----~~g~~---~~i~~~~~~~~~~~i~~~~--~~~  121 (241)
                      +|.++||+||++++|++.++.+...|++|+++++++++.+.+.+    +.|..   ...|..++.++...+.+..  -++
T Consensus         8 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   87 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP   87 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            57899999999999999999999999999999998776544332    44543   2335555423333333222  147


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|++++++|
T Consensus        88 iDilVnnAg   96 (260)
T d1h5qa_          88 ISGLIANAG   96 (260)
T ss_dssp             EEEEEECCC
T ss_pred             CcEeccccc
Confidence            999999987

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=98.11  E-value=3.8e-06  Score=64.16  Aligned_cols=80  Identities=15%  Similarity=0.236  Sum_probs=56.1

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----cCCCe-e--ecCCCchhHHHHHHHHC--CCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK----FGFDE-A--FNYKEEPDLDAALKRYF--PEG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~----~g~~~-~--i~~~~~~~~~~~i~~~~--~~~  121 (241)
                      .|.+++|+||++++|.+.++.+...|++|+++++++++.+.+.++    .|... .  .|..+..+....+....  .++
T Consensus        24 ~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  103 (294)
T d1w6ua_          24 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGH  103 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhccc
Confidence            578999999999999999999999999999999998876544433    34322 2  34444312322222221  247


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|++++++|
T Consensus       104 iDilvnnAg  112 (294)
T d1w6ua_         104 PNIVINNAA  112 (294)
T ss_dssp             CSEEEECCC
T ss_pred             cchhhhhhh
Confidence            999999987

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=98.10  E-value=1.2e-05  Score=55.95  Aligned_cols=72  Identities=15%  Similarity=0.133  Sum_probs=56.1

Q ss_pred             HhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCcc
Q 026217           45 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGIN  123 (241)
Q Consensus        45 ~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d  123 (241)
                      +...+.++.+|+|.|+ ||.+.+++.-++..|+ +|+++.|+.++.+.+.+.++...+-....             ..+|
T Consensus        10 ~~~~~~~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~~~~~~~-------------~~~D   75 (167)
T d1npya1          10 EKYHLNKNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSLEN-------------QQAD   75 (167)
T ss_dssp             HHTTCCTTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESCCTT-------------CCCS
T ss_pred             HHcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhhhhcccc-------------cchh
Confidence            4456677889999996 9999999999999998 89999999998888875676543211111             2589


Q ss_pred             EEEeCCC
Q 026217          124 IYFENVG  130 (241)
Q Consensus       124 ~v~d~~g  130 (241)
                      ++++|+.
T Consensus        76 liINaTp   82 (167)
T d1npya1          76 ILVNVTS   82 (167)
T ss_dssp             EEEECSS
T ss_pred             hheeccc
Confidence            9999986

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=98.10  E-value=6.3e-07  Score=66.36  Aligned_cols=98  Identities=16%  Similarity=0.143  Sum_probs=62.7

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCC--c---hhHHHHHHHH-CCCCccEE
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKE--E---PDLDAALKRY-FPEGINIY  125 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~--~---~~~~~~i~~~-~~~~~d~v  125 (241)
                      +.+|+|+||++++|.+.++.+...|++|+.+++++++....      ...+....  .   ....+.+... ..+++|++
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~l   75 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADS------NILVDGNKNWTEQEQSILEQTASSLQGSQVDGV   75 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSSE------EEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcccc------cceeccccCchhHHHHHHHHHHHHhcCCCeeEE
Confidence            45799999999999999999999999999999875432110      01111111  0   0122222222 33589999


Q ss_pred             EeCCCc----h--------h---------------HHHHHHhhccCCEEEEEeeecc
Q 026217          126 FENVGG----K--------M---------------LDAVLLNMRIQGRITLCGMISQ  155 (241)
Q Consensus       126 ~d~~g~----~--------~---------------~~~~~~~l~~~G~~v~~g~~~~  155 (241)
                      ++++|.    .        .               .+..+..++++|+++.++....
T Consensus        76 innAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~  132 (235)
T d1ooea_          76 FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAA  132 (235)
T ss_dssp             EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred             EECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHh
Confidence            999872    1        0               1344556778899999987554

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.10  E-value=1.3e-05  Score=59.03  Aligned_cols=72  Identities=25%  Similarity=0.324  Sum_probs=52.7

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe-eecCCCchhHHHHHHHHCCCCccEEEeCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFENV  129 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~i~~~~~~~~d~v~d~~  129 (241)
                      +|.++||+||++++|.+.++.+...|++|++++++++..+    +.+... ..|.++  .+. .+.+.. +.+|++++++
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~----~~~~~~~~~Dv~~--~~~-~~~~~~-g~iD~lVnnA   74 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK----RSGHRYVVCDLRK--DLD-LLFEKV-KEVDILVLNA   74 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH----HTCSEEEECCTTT--CHH-HHHHHS-CCCSEEEECC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH----hcCCcEEEcchHH--HHH-HHHHHh-CCCcEEEecc
Confidence            5789999999999999999999999999999999876554    444432 223332  232 333332 3699999998


Q ss_pred             C
Q 026217          130 G  130 (241)
Q Consensus       130 g  130 (241)
                      |
T Consensus        75 G   75 (234)
T d1o5ia_          75 G   75 (234)
T ss_dssp             C
T ss_pred             c
Confidence            7

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=98.09  E-value=5.6e-06  Score=62.05  Aligned_cols=80  Identities=18%  Similarity=0.223  Sum_probs=54.3

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHH---HcCCCe---eecCCCchhHHHHHHHHCC--CC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD-KVDLLKN---KFGFDE---AFNYKEEPDLDAALKRYFP--EG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~-~~~~~~~---~~g~~~---~i~~~~~~~~~~~i~~~~~--~~  121 (241)
                      +|.+++|+||++++|++.++.+...|++|+++.++++ ..+.+.+   +.|...   ..|..++.++.+.+.+...  |+
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~   85 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK   85 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5789999999999999999999999999999998743 3333321   445431   2344444233333332221  37


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|++++++|
T Consensus        86 iDiLVnnAG   94 (261)
T d1geea_          86 LDVMINNAG   94 (261)
T ss_dssp             CCEEEECCC
T ss_pred             CCEeeccce
Confidence            999999987

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=98.08  E-value=5.1e-06  Score=60.23  Aligned_cols=112  Identities=15%  Similarity=0.218  Sum_probs=75.5

Q ss_pred             hcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCCeeecCCCc
Q 026217           31 ILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEE  107 (241)
Q Consensus        31 ~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~---~~g~~~~i~~~~~  107 (241)
                      .+..+.+.|. .+ +..++++|++||..|  ++.|..++.+++..|.+|+++...++-.+.+++   ++|.+.+..... 
T Consensus        60 ~is~P~~~a~-ml-~~L~l~~g~~VLeIG--sGsGY~taila~l~g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~g-  134 (215)
T d1jg1a_          60 TVSAPHMVAI-ML-EIANLKPGMNILEVG--TGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILG-  134 (215)
T ss_dssp             EECCHHHHHH-HH-HHHTCCTTCCEEEEC--CTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEES-
T ss_pred             hhhhhhhHHH-HH-HhhccCccceEEEec--CCCChhHHHHHHhhCceeEEEeccHHHHHHHHHHHHHcCCceeEEEEC-
Confidence            4444554454 34 567999999999999  788999999998889889999988775555542   456554322221 


Q ss_pred             hhHHHHHHHHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEE
Q 026217          108 PDLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLC  150 (241)
Q Consensus       108 ~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~  150 (241)
                       +.....  ...+.||.++-+.+- ......++.|++||+++..
T Consensus       135 -d~~~g~--~~~~pfD~Iiv~~a~~~ip~~l~~qL~~gGrLv~p  175 (215)
T d1jg1a_         135 -DGSKGF--PPKAPYDVIIVTAGAPKIPEPLIEQLKIGGKLIIP  175 (215)
T ss_dssp             -CGGGCC--GGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             -ccccCC--cccCcceeEEeecccccCCHHHHHhcCCCCEEEEE
Confidence             111000  112379998876663 4557788999999999874

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=98.07  E-value=9.8e-06  Score=60.18  Aligned_cols=104  Identities=13%  Similarity=0.175  Sum_probs=68.9

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH-HH-HHHHHHcCCCe---eecCCCchhHHHHHHHHCC--CCcc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD-KV-DLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGIN  123 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~-~~-~~~~~~~g~~~---~i~~~~~~~~~~~i~~~~~--~~~d  123 (241)
                      +|.+++|+||++++|++.++.+...|++|+++++++. .. +.++ +.|...   ..|-.++.++...+.+...  |++|
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~-~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iD   82 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIR-NLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD   82 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHH-HTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHH-HcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence            5789999999999999999999999999999998653 22 3334 666532   3344544233333332222  4799


Q ss_pred             EEEeCCCch-----------h---------------HHHHHHhhcc--CCEEEEEeeecc
Q 026217          124 IYFENVGGK-----------M---------------LDAVLLNMRI--QGRITLCGMISQ  155 (241)
Q Consensus       124 ~v~d~~g~~-----------~---------------~~~~~~~l~~--~G~~v~~g~~~~  155 (241)
                      ++++++|..           .               .+..+..+..  +|+++.+++..+
T Consensus        83 ilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~  142 (247)
T d2ew8a1          83 ILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTY  142 (247)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             EEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchh
Confidence            999998731           1               1234444533  589999887654

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=98.07  E-value=5.8e-06  Score=61.57  Aligned_cols=79  Identities=15%  Similarity=0.133  Sum_probs=56.2

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHcCCC---eeecCCCchh---HHHHHHHHCCC-Cc
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEPD---LDAALKRYFPE-GI  122 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~--~v~~~~~~~~~~~~~~~~~g~~---~~i~~~~~~~---~~~~i~~~~~~-~~  122 (241)
                      ..+|||+||++|+|++.++.+...|+  +|+.++|+.++.+.+++..+..   ...|..+..+   +.+.+.+..+. ++
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~i   82 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL   82 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCe
Confidence            47899999999999999888888885  7999999999888888333332   1234444312   33444443333 69


Q ss_pred             cEEEeCCC
Q 026217          123 NIYFENVG  130 (241)
Q Consensus       123 d~v~d~~g  130 (241)
                      |++++++|
T Consensus        83 dilinnAG   90 (250)
T d1yo6a1          83 SLLINNAG   90 (250)
T ss_dssp             CEEEECCC
T ss_pred             EEEEEcCc
Confidence            99999998

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=98.05  E-value=6.9e-06  Score=61.33  Aligned_cols=77  Identities=14%  Similarity=0.176  Sum_probs=54.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCCe---eecCCCchhHHHHHHHHCC--CCccEE
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDE---AFNYKEEPDLDAALKRYFP--EGINIY  125 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~---~g~~~---~i~~~~~~~~~~~i~~~~~--~~~d~v  125 (241)
                      .++|+||++++|++.++.+...|++|+.+++++++.+.+.++   .|...   ..|..++.++...+.+...  |++|++
T Consensus         3 ValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   82 (255)
T d1gega_           3 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVI   82 (255)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCEE
T ss_pred             EEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccEE
Confidence            579999999999999999999999999999999887666533   34321   2355544233333332221  479999


Q ss_pred             EeCCC
Q 026217          126 FENVG  130 (241)
Q Consensus       126 ~d~~g  130 (241)
                      ++++|
T Consensus        83 VnnAG   87 (255)
T d1gega_          83 VNNAG   87 (255)
T ss_dssp             EECCC
T ss_pred             Eeccc
Confidence            99987

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=98.03  E-value=1e-05  Score=60.57  Aligned_cols=105  Identities=15%  Similarity=0.214  Sum_probs=68.4

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHH----HcCCCe---eecCCCchhHHHHHHHHCC--C
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK-DKVDLLKN----KFGFDE---AFNYKEEPDLDAALKRYFP--E  120 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~-~~~~~~~~----~~g~~~---~i~~~~~~~~~~~i~~~~~--~  120 (241)
                      +|.+++|+||++++|++.++.+...|++|+++.+++ +..+.+.+    ..|...   ..|..+..++.+.+.+...  |
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   82 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG   82 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            678999999999999999999999999999999863 44444332    334332   2344443233333322221  4


Q ss_pred             CccEEEeCCCch-----------h---------------HHHHHHhhcc--CCEEEEEeeecc
Q 026217          121 GINIYFENVGGK-----------M---------------LDAVLLNMRI--QGRITLCGMISQ  155 (241)
Q Consensus       121 ~~d~v~d~~g~~-----------~---------------~~~~~~~l~~--~G~~v~~g~~~~  155 (241)
                      ++|++++++|..           .               .+.+++.+..  +|+++.+++..+
T Consensus        83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~  145 (260)
T d1x1ta1          83 RIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHG  145 (260)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             CCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccc
Confidence            799999998731           0               1334445543  589999887655

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=98.02  E-value=1.3e-05  Score=59.34  Aligned_cols=170  Identities=17%  Similarity=0.106  Sum_probs=93.8

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHH---HcCCC---eeecCCCchhHH---HHHHHHCCCCc
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSA-GSKDKVDLLKN---KFGFD---EAFNYKEEPDLD---AALKRYFPEGI  122 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~~-~~~~~~~~~~~---~~g~~---~~i~~~~~~~~~---~~i~~~~~~~~  122 (241)
                      ..+||+||++++|++.++.+...|++|++++ ++++..+.+.+   ..|..   ...|..+..++.   +.+.+.. +++
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~i   80 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAW-GTI   80 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHS-SCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHc-CCC
Confidence            3689999999999999999999999998875 45555554442   34432   123444432333   3333333 479


Q ss_pred             cEEEeCCCch-----------h---------------HHHHHHhh--ccCCEEEEEeeeccc-CCCCCC-----------
Q 026217          123 NIYFENVGGK-----------M---------------LDAVLLNM--RIQGRITLCGMISQY-NNDKPE-----------  162 (241)
Q Consensus       123 d~v~d~~g~~-----------~---------------~~~~~~~l--~~~G~~v~~g~~~~~-~~~~~~-----------  162 (241)
                      |++++++|..           .               .+.+++.|  +.+|+++.+++..+. +.....           
T Consensus        81 DiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~  160 (244)
T d1edoa_          81 DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIG  160 (244)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHH
T ss_pred             CccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCCHHHHHHHHHHHH
Confidence            9999998731           0               23445555  347999999875542 111100           


Q ss_pred             -CccChHHHhhcceEEEEeecccccchh-HHHHHHHHHHHHcCCceeccceeecCCcHHHHHHHhh
Q 026217          163 -GVHNLTCLISKRIRMEGFLVPDYFHLY-PKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLF  226 (241)
Q Consensus       163 -~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~l~  226 (241)
                       .......+-.+++++.....+.....+ .+..++..+.+.+.   .+..+.-.-+|+.++..+|.
T Consensus       161 ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~---~pl~R~~~p~dvA~~v~fLa  223 (244)
T d1edoa_         161 FSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGT---IPLGRTGQPENVAGLVEFLA  223 (244)
T ss_dssp             HHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHHHHTS---CTTCSCBCHHHHHHHHHHHH
T ss_pred             ChHHHHHHHhhhCcEEEEEecceeccHHHHHhhHHHHHHHHhc---CCCCCCcCHHHHHHHHHHHH
Confidence             000112333456777666655442111 11122222333221   11122234578888888884

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.99  E-value=1e-05  Score=60.47  Aligned_cols=105  Identities=20%  Similarity=0.270  Sum_probs=68.4

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHH---HcCCCe---eecCCCchhHHHHHHHHCC--C
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKDKVDLLKN---KFGFDE---AFNYKEEPDLDAALKRYFP--E  120 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~-~~~~~~~~~~---~~g~~~---~i~~~~~~~~~~~i~~~~~--~  120 (241)
                      -.|+++||+||++++|.+.++.+...|++|+++.+ +++..+.+.+   +.|.+.   ..|..+..+..+.+.....  +
T Consensus         4 L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g   83 (259)
T d1ja9a_           4 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFG   83 (259)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcC
Confidence            36899999999999999999999999999988754 4444444332   455432   2344443233333332221  3


Q ss_pred             CccEEEeCCCch--------------------------hHHHHHHhhccCCEEEEEeeec
Q 026217          121 GINIYFENVGGK--------------------------MLDAVLLNMRIQGRITLCGMIS  154 (241)
Q Consensus       121 ~~d~v~d~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~  154 (241)
                      ++|++++++|..                          ..+..+..++++|+++.+....
T Consensus        84 ~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~  143 (259)
T d1ja9a_          84 GLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIA  143 (259)
T ss_dssp             CEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGG
T ss_pred             CCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCccccccccc
Confidence            799999999731                          1245566677788888776544

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.97  E-value=9.7e-06  Score=61.01  Aligned_cols=45  Identities=29%  Similarity=0.355  Sum_probs=40.7

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN   94 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~   94 (241)
                      -+|.+++|+||++|+|++.++.+...|++|+.+++++++.+.+.+
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~   56 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVS   56 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence            368999999999999999999999999999999999998877653

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.96  E-value=2.3e-06  Score=62.20  Aligned_cols=108  Identities=19%  Similarity=0.232  Sum_probs=72.0

Q ss_pred             hhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHc---CCCeeecCCCchh
Q 026217           35 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEPD  109 (241)
Q Consensus        35 ~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~--~v~~~~~~~~~~~~~~~~~---g~~~~i~~~~~~~  109 (241)
                      +...|. .+ +..++++|++||-.|  .|.|..++.+++..|.  +|++++.+++..+.+++.+   +.+.+.-...  +
T Consensus        61 P~~~a~-~l-~~l~l~~g~~VLdiG--~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~--d  134 (213)
T d1dl5a1          61 PSLMAL-FM-EWVGLDKGMRVLEIG--GGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCG--D  134 (213)
T ss_dssp             HHHHHH-HH-HHTTCCTTCEEEEEC--CTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES--C
T ss_pred             chhhHH-HH-HhhhccccceEEEec--CccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccC--c
Confidence            444444 34 667899999999999  5558889999998764  8999999998887777432   3322111111  1


Q ss_pred             HHHHHHHHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEE
Q 026217          110 LDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLC  150 (241)
Q Consensus       110 ~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~  150 (241)
                      ..+..  ...+.||.|+.+.+- ......++.|++||+++..
T Consensus       135 ~~~~~--~~~~~fD~I~~~~~~~~~p~~l~~~LkpGG~lv~p  174 (213)
T d1dl5a1         135 GYYGV--PEFSPYDVIFVTVGVDEVPETWFTQLKEGGRVIVP  174 (213)
T ss_dssp             GGGCC--GGGCCEEEEEECSBBSCCCHHHHHHEEEEEEEEEE
T ss_pred             hHHcc--ccccchhhhhhhccHHHhHHHHHHhcCCCcEEEEE
Confidence            11000  111369999987764 4456788999999999873

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=97.92  E-value=1.5e-05  Score=58.07  Aligned_cols=108  Identities=8%  Similarity=0.034  Sum_probs=71.4

Q ss_pred             cCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC---eeecCCCch
Q 026217           32 LGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEP  108 (241)
Q Consensus        32 l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~---~~i~~~~~~  108 (241)
                      ++.+...|. .+ +...+++|++||-.|  +|.|..++.+++. +.+|+++..+++-.+.+++.+...   .++. .+  
T Consensus        53 ~~~p~~~a~-ml-~~L~l~~g~~VLdIG--~GsGy~ta~La~l-~~~V~aiE~~~~~~~~A~~~~~~~~nv~~~~-~d--  124 (224)
T d1vbfa_          53 TTALNLGIF-ML-DELDLHKGQKVLEIG--TGIGYYTALIAEI-VDKVVSVEINEKMYNYASKLLSYYNNIKLIL-GD--  124 (224)
T ss_dssp             ECCHHHHHH-HH-HHTTCCTTCEEEEEC--CTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTCSSEEEEE-SC--
T ss_pred             eehhhhHHH-HH-HHhhhcccceEEEec--CCCCHHHHHHHHH-hcccccccccHHHHHHHHHHHhccccccccc-Cc--
Confidence            344444454 33 667899999999999  5678888777764 679999999999888888443321   1211 11  


Q ss_pred             hHHHHHHHHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEE
Q 026217          109 DLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLC  150 (241)
Q Consensus       109 ~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~  150 (241)
                       ......  ..+.||.++-+.+. ......++.|++||+++..
T Consensus       125 -~~~g~~--~~~pfD~Iiv~~a~~~ip~~l~~qLk~GGrLV~p  164 (224)
T d1vbfa_         125 -GTLGYE--EEKPYDRVVVWATAPTLLCKPYEQLKEGGIMILP  164 (224)
T ss_dssp             -GGGCCG--GGCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             -hhhcch--hhhhHHHHHhhcchhhhhHHHHHhcCCCCEEEEE
Confidence             110001  11369988866553 4556778999999999875

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.92  E-value=5.3e-05  Score=57.38  Aligned_cols=104  Identities=11%  Similarity=0.020  Sum_probs=71.9

Q ss_pred             HHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCCeeecCCCchhHHHHHHH
Q 026217           40 YAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKR  116 (241)
Q Consensus        40 ~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~---~~g~~~~i~~~~~~~~~~~i~~  116 (241)
                      +.-+.+.+++++|++||=+|  .|.|-.+..+|+..|++|++++.+++..+.+++   ..|....+..... +.     .
T Consensus        50 ~~~~~~~l~l~~G~~VLDiG--CG~G~~~~~~a~~~g~~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~~-d~-----~  121 (291)
T d1kpia_          50 RKLALDKLNLEPGMTLLDIG--CGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQ-GW-----E  121 (291)
T ss_dssp             HHHHHHTTCCCTTCEEEEET--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHSCCSSCEEEEEC-CG-----G
T ss_pred             HHHHHHhcCCCCCCEEEEec--CcchHHHHHHHHhcCcceeeccchHHHHHHHHHHHHhhccchhhhhhhh-cc-----c
Confidence            44455668999999999999  667778889999999999999999998776652   3454322211111 11     1


Q ss_pred             HCCCCccEEEeCC-----Cc-----------hhHHHHHHhhccCCEEEEEe
Q 026217          117 YFPEGINIYFENV-----GG-----------KMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       117 ~~~~~~d~v~d~~-----g~-----------~~~~~~~~~l~~~G~~v~~g  151 (241)
                      ..++.||.|+..-     +.           ..++.+.++|+|+|+++.-.
T Consensus       122 ~~~~~fD~i~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~LkpgG~~~l~~  172 (291)
T d1kpia_         122 EFDEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT  172 (291)
T ss_dssp             GCCCCCSEEEEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred             ccccccceEeechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCCCceEEEE
Confidence            2235799886422     21           24778899999999998644

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.92  E-value=6.4e-05  Score=52.26  Aligned_cols=83  Identities=11%  Similarity=0.131  Sum_probs=56.5

Q ss_pred             HHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC
Q 026217           41 AGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE  120 (241)
Q Consensus        41 ~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~  120 (241)
                      .+|.+..-..+|.+|+|.|+ ||.+.+++..+...|++|+++.|+.++.+.+.+.+.....+..-.   +.    +....
T Consensus         7 ~~l~~~~~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~---~~----~~~~~   78 (170)
T d1nyta1           7 SDLERLSFIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALS---MD----ELEGH   78 (170)
T ss_dssp             HHHHHHTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECC---SG----GGTTC
T ss_pred             HHHHHcCCCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcccccccc---cc----ccccc
Confidence            34544333457889999996 999999999999999999999999998877774554211111111   10    11113


Q ss_pred             CccEEEeCCCc
Q 026217          121 GINIYFENVGG  131 (241)
Q Consensus       121 ~~d~v~d~~g~  131 (241)
                      .+|++++|+..
T Consensus        79 ~~dliIN~Tp~   89 (170)
T d1nyta1          79 EFDLIINATSS   89 (170)
T ss_dssp             CCSEEEECCSC
T ss_pred             ccceeeccccc
Confidence            69999999963

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.89  E-value=2.8e-05  Score=59.39  Aligned_cols=105  Identities=22%  Similarity=0.221  Sum_probs=67.5

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC---------HHHHHHHHHHc---CCCeeecCCCchhHHHHHHHHC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS---------KDKVDLLKNKF---GFDEAFNYKEEPDLDAALKRYF  118 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~---------~~~~~~~~~~~---g~~~~i~~~~~~~~~~~i~~~~  118 (241)
                      .|.+++|+||++++|++.++.+...|++|++++++         .+..+.+.+++   +.....|..+..+..+.+....
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~   85 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL   85 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHH
Confidence            58899999999999999999999999999998643         33333332232   3333444444323333333321


Q ss_pred             --CCCccEEEeCCCch-----------h---------------HHHHHHhhc--cCCEEEEEeeecc
Q 026217          119 --PEGINIYFENVGGK-----------M---------------LDAVLLNMR--IQGRITLCGMISQ  155 (241)
Q Consensus       119 --~~~~d~v~d~~g~~-----------~---------------~~~~~~~l~--~~G~~v~~g~~~~  155 (241)
                        -|++|++++++|..           .               .+.++..|.  .+|+++.+++..+
T Consensus        86 ~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~  152 (302)
T d1gz6a_          86 DTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASG  152 (302)
T ss_dssp             HHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHH
T ss_pred             HHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhh
Confidence              24799999998731           1               234455554  3589999987554

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.87  E-value=9.6e-06  Score=58.39  Aligned_cols=97  Identities=12%  Similarity=0.102  Sum_probs=64.0

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe-eecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      ..+|+|+||+|.+|...+..+...|.+|++++|++++..... ..++.. ..|..+..++.+.+.     ++|+||.++|
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~-~~~~~~~~gD~~d~~~l~~al~-----~~d~vi~~~g   76 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG-PRPAHVVVGDVLQAADVDKTVA-----GQDAVIVLLG   76 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS-CCCSEEEESCTTSHHHHHHHHT-----TCSEEEECCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccccc-ccccccccccccchhhHHHHhc-----CCCEEEEEec
Confidence            467999999999999999999999999999999988765443 333332 224444312222222     5899999997


Q ss_pred             ch-----------hHHHHHHhhccC--CEEEEEeeec
Q 026217          131 GK-----------MLDAVLLNMRIQ--GRITLCGMIS  154 (241)
Q Consensus       131 ~~-----------~~~~~~~~l~~~--G~~v~~g~~~  154 (241)
                      ..           .....++.++..  .+++.++...
T Consensus        77 ~~~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~  113 (205)
T d1hdoa_          77 TRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAF  113 (205)
T ss_dssp             CTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGG
T ss_pred             cCCchhhhhhhHHHHHHHHHHHHhcCCCeEEEEeeee
Confidence            41           123445555543  4777776533

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.86  E-value=3.3e-06  Score=62.44  Aligned_cols=75  Identities=15%  Similarity=0.143  Sum_probs=52.7

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCC--CCccEEEeC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFP--EGINIYFEN  128 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~--~~~d~v~d~  128 (241)
                      .|.+++|+||++++|++.++.+...|++|+++.++++..+.+. .    ...|..+..++.+.+.+...  +++|+++++
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~-~----~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnn   80 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF-G----VEVDVTDSDAVDRAFTAVEEHQGPVEVLVSN   80 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE-E----EECCTTCHHHHHHHHHHHHHHHSSCSEEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhcCce-E----EEEecCCHHHHHHHHHHHHHhcCCceEEEee
Confidence            5789999999999999999999999999999998865544222 1    23344443233322222221  379999999


Q ss_pred             CC
Q 026217          129 VG  130 (241)
Q Consensus       129 ~g  130 (241)
                      +|
T Consensus        81 AG   82 (237)
T d1uzma1          81 AG   82 (237)
T ss_dssp             CS
T ss_pred             ec
Confidence            87

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=97.86  E-value=2.3e-05  Score=57.96  Aligned_cols=101  Identities=7%  Similarity=0.024  Sum_probs=68.9

Q ss_pred             HhcCCCCCcEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHc---CCCeeecCCCchhHHHHHHHHCC
Q 026217           45 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEPDLDAALKRYFP  119 (241)
Q Consensus        45 ~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g--~~v~~~~~~~~~~~~~~~~~---g~~~~i~~~~~~~~~~~i~~~~~  119 (241)
                      ..++++||++||-.|  .|.|.+++.+|+..|  .+|++++.+++..+.+++.+   +...-+..... ++.+.   ..+
T Consensus        79 ~~l~i~pG~rVLEiG--~GsG~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~-Di~~~---~~~  152 (250)
T d1yb2a1          79 MRCGLRPGMDILEVG--VGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRS-DIADF---ISD  152 (250)
T ss_dssp             --CCCCTTCEEEEEC--CTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECS-CTTTC---CCS
T ss_pred             HHcCCCCcCEEEEee--eeCcHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEEe-eeecc---ccc
Confidence            447899999999998  455788888898875  48999999999888887543   22111111111 22211   122


Q ss_pred             CCccEEEeCCCc--hhHHHHHHhhccCCEEEEEe
Q 026217          120 EGINIYFENVGG--KMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       120 ~~~d~v~d~~g~--~~~~~~~~~l~~~G~~v~~g  151 (241)
                      +.||.|+--...  ..+..+.+.|++||+++.+.
T Consensus       153 ~~fD~V~ld~p~p~~~l~~~~~~LKpGG~lv~~~  186 (250)
T d1yb2a1         153 QMYDAVIADIPDPWNHVQKIASMMKPGSVATFYL  186 (250)
T ss_dssp             CCEEEEEECCSCGGGSHHHHHHTEEEEEEEEEEE
T ss_pred             ceeeeeeecCCchHHHHHHHHHhcCCCceEEEEe
Confidence            379988744442  57899999999999998763

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=97.86  E-value=4.1e-09  Score=76.37  Aligned_cols=69  Identities=17%  Similarity=0.084  Sum_probs=51.9

Q ss_pred             CCccceEEeecCC--ceeeecCCCCCcchhhhhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC
Q 026217            1 MTGWEEYSLVTAP--RLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC   77 (241)
Q Consensus         1 ~G~~ae~~~v~~~--~~~~i~P~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~   77 (241)
                      .|+|+||+++|..  .++++ |++. ++.+++++..++.++++++.+ ...+.++    +| +|++|+.++|.||.+|+
T Consensus       131 ~Gg~aeyv~vp~~~~~l~~i-Pd~~-~~~~~~~~~~~~~~~~~a~~~-~~~~~g~----~g-~G~vG~~~i~~ak~~GA  201 (201)
T d1kola1         131 TGGQAEYVLVPYADFNLLKL-PDRD-KAMEKINIAEVVGVQVISLDD-APRGYGE----FD-AGVPKKFVIDPHKTFSA  201 (201)
T ss_dssp             CCCSBSEEEESSHHHHCEEC-SCHH-HHHHTCCHHHHHTEEEECGGG-HHHHHHH----HH-HTCSCEEEECTTCSSCC
T ss_pred             ccccccEEEeehHHCeEEEC-CCCC-ChHHHHHHHHHHHHHHHHHHh-CCCCCeE----Ee-eCHHHHHHHHHHHHcCC
Confidence            4899999999853  59999 9862 222467777888888888744 4444454    46 59999999999999885

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=97.85  E-value=7.7e-05  Score=55.51  Aligned_cols=82  Identities=17%  Similarity=0.212  Sum_probs=54.8

Q ss_pred             CCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHH-------HHHHHHHcCCCe---eecCCCchhHHHHHHH
Q 026217           48 SPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDK-------VDLLKNKFGFDE---AFNYKEEPDLDAALKR  116 (241)
Q Consensus        48 ~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~-------~~~~~~~~g~~~---~i~~~~~~~~~~~i~~  116 (241)
                      .++|+.++||+||++++|++.++.+...|+ +|+.+.|+..+       .+.++ ..|...   ..|..+..++...+..
T Consensus         5 ~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~-~~g~~v~~~~~Dv~d~~~~~~~~~~   83 (259)
T d2fr1a1           5 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELE-ALGARTTVAACDVTDRESVRELLGG   83 (259)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHH-HTTCEEEEEECCTTCHHHHHHHHHT
T ss_pred             ccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHH-hccccccccccccchHHHHHHhhcc
Confidence            468999999999999999999998888898 68878776322       22333 455532   2355554233333333


Q ss_pred             HCCC-CccEEEeCCC
Q 026217          117 YFPE-GINIYFENVG  130 (241)
Q Consensus       117 ~~~~-~~d~v~d~~g  130 (241)
                      .... ++|.++++.|
T Consensus        84 i~~~~~i~~vv~~ag   98 (259)
T d2fr1a1          84 IGDDVPLSAVFHAAA   98 (259)
T ss_dssp             SCTTSCEEEEEECCC
T ss_pred             ccccccccccccccc
Confidence            3333 7999999887

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=97.85  E-value=9.1e-06  Score=60.62  Aligned_cols=105  Identities=14%  Similarity=0.083  Sum_probs=65.0

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH---HHcCCCe----eecCC-CchhHHHHHHHHCC--C
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK---NKFGFDE----AFNYK-EEPDLDAALKRYFP--E  120 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~---~~~g~~~----~i~~~-~~~~~~~~i~~~~~--~  120 (241)
                      +|.+++|+||++++|++.+......|++|++++++.++.+.+.   ...+...    ..|.. +..++.+.+.+...  +
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g   83 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcC
Confidence            5889999999999999999999999999988877655443333   1233221    22332 21123222322222  3


Q ss_pred             CccEEEeCCCc---hhH---------------HHHHHhhc-----cCCEEEEEeeecc
Q 026217          121 GINIYFENVGG---KML---------------DAVLLNMR-----IQGRITLCGMISQ  155 (241)
Q Consensus       121 ~~d~v~d~~g~---~~~---------------~~~~~~l~-----~~G~~v~~g~~~~  155 (241)
                      ++|++++++|.   +.+               +..++.+.     ++|+++.++...+
T Consensus        84 ~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~  141 (254)
T d1sbya1          84 TVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTG  141 (254)
T ss_dssp             CCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG
T ss_pred             CCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhh
Confidence            79999999984   222               23333442     2588888876554

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=97.83  E-value=2.1e-05  Score=58.24  Aligned_cols=106  Identities=15%  Similarity=0.132  Sum_probs=72.1

Q ss_pred             HHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCCeeecCCCchhHHHHHHH
Q 026217           40 YAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKR  116 (241)
Q Consensus        40 ~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~---~~g~~~~i~~~~~~~~~~~i~~  116 (241)
                      +..+...++++||++||=+|  .|.|..+..+++..|++|++++.+++..+.+++   ..|...-+..... +..+ +  
T Consensus        22 ~~~l~~~~~l~pg~~VLDiG--CG~G~~~~~la~~~~~~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~-d~~~-~--   95 (245)
T d1nkva_          22 YATLGRVLRMKPGTRILDLG--SGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHN-DAAG-Y--   95 (245)
T ss_dssp             HHHHHHHTCCCTTCEEEEET--CTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES-CCTT-C--
T ss_pred             HHHHHHHcCCCCCCEEEEEc--CCCCHHHHHHHHhcCCEEEEEecccchhhHHHHHHHHhhccccchhhhh-HHhh-c--
Confidence            44566778999999999998  566777888888889999999999988877763   2354321111111 1111 1  


Q ss_pred             HCCCCccEEEeCCC-------chhHHHHHHhhccCCEEEEEe
Q 026217          117 YFPEGINIYFENVG-------GKMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       117 ~~~~~~d~v~d~~g-------~~~~~~~~~~l~~~G~~v~~g  151 (241)
                      ..++.||.|+..-.       ...+..+.+.|+|||+++...
T Consensus        96 ~~~~~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPGG~l~i~~  137 (245)
T d1nkva_          96 VANEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE  137 (245)
T ss_dssp             CCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred             cccCceeEEEEEehhhccCCHHHHHHHHHHHcCcCcEEEEEe
Confidence            12348998875332       246778888999999998753

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=97.81  E-value=2.8e-05  Score=57.36  Aligned_cols=102  Identities=13%  Similarity=0.159  Sum_probs=68.0

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCE-------EEEEeCCHHHHHHHHHHc---CCC---eeecCCCchhHHH---HHHH
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCY-------VVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEPDLDA---ALKR  116 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~-------v~~~~~~~~~~~~~~~~~---g~~---~~i~~~~~~~~~~---~i~~  116 (241)
                      +.|||+||++++|++.++.+...|++       |+..++++++.+.+.+++   |..   ...|..+..++.+   .+.+
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            45899999999999999988888886       899999988877665443   332   1235555423332   3333


Q ss_pred             HCCCCccEEEeCCCch-----------h---------------HHHHHHhhcc--CCEEEEEeeecc
Q 026217          117 YFPEGINIYFENVGGK-----------M---------------LDAVLLNMRI--QGRITLCGMISQ  155 (241)
Q Consensus       117 ~~~~~~d~v~d~~g~~-----------~---------------~~~~~~~l~~--~G~~v~~g~~~~  155 (241)
                      .. |++|++++++|..           .               .+.++..|+.  +|+++.+++..+
T Consensus        82 ~~-g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~  147 (240)
T d2bd0a1          82 RY-GHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAA  147 (240)
T ss_dssp             HT-SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             Hc-CCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhh
Confidence            22 3799999998731           1               2345555543  689999887554

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.78  E-value=7.4e-06  Score=61.05  Aligned_cols=75  Identities=16%  Similarity=0.086  Sum_probs=52.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC----CCeeecCCCchhHHHHHHHHCCCCccEEEeCC
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFG----FDEAFNYKEEPDLDAALKRYFPEGINIYFENV  129 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g----~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~  129 (241)
                      +++|+||++++|++.++.+...|++|++++++.++.+.++ ..+    ...+.+..+...+.+.+.+.. |++|++++++
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~-~~~~~~~~~dv~~~~~~~~~~~~~~~~~-G~iDiLVnNA   79 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELE-AFAETYPQLKPMSEQEPAELIEAVTSAY-GQVDVLVSND   79 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHH-HHHHHCTTSEECCCCSHHHHHHHHHHHH-SCCCEEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hhhCcEEEeccCCHHHHHHHHHHHHHHc-CCCCEEEECC
Confidence            7899999999999999999999999999998888777665 332    222333332213333343332 3799999877


Q ss_pred             C
Q 026217          130 G  130 (241)
Q Consensus       130 g  130 (241)
                      |
T Consensus        80 g   80 (252)
T d1zmta1          80 I   80 (252)
T ss_dssp             C
T ss_pred             c
Confidence            5

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.76  E-value=2.7e-05  Score=58.03  Aligned_cols=80  Identities=15%  Similarity=0.151  Sum_probs=52.8

Q ss_pred             CCcEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH---HHcCCCee--ecCCCchhHHHHHHHHC--CCC
Q 026217           51 QGEYVFVSAASG--AVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK---NKFGFDEA--FNYKEEPDLDAALKRYF--PEG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g--~~G~~avqla~~~g~~v~~~~~~~~~~~~~~---~~~g~~~~--i~~~~~~~~~~~i~~~~--~~~  121 (241)
                      +|.+++|+||+|  ++|++.++.+...|++|+++.++++..+.+.   +..+....  .|..+..+....+....  -++
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG   86 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcCC
Confidence            688999999987  8999999999999999999998866544333   12333222  23444313322222221  147


Q ss_pred             ccEEEeCCC
Q 026217          122 INIYFENVG  130 (241)
Q Consensus       122 ~d~v~d~~g  130 (241)
                      +|++++++|
T Consensus        87 iDilVnnag   95 (256)
T d1ulua_          87 LDYLVHAIA   95 (256)
T ss_dssp             EEEEEECCC
T ss_pred             ceEEEeccc
Confidence            999999886

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.75  E-value=0.00013  Score=54.95  Aligned_cols=104  Identities=11%  Similarity=0.048  Sum_probs=71.3

Q ss_pred             HHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCCeeecCCCchhHHHHHHHH
Q 026217           41 AGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRY  117 (241)
Q Consensus        41 ~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~---~g~~~~i~~~~~~~~~~~i~~~  117 (241)
                      ..+.+..+++||++||=+|  .|.|..++.+|+..|++|++++.|+++.+.+++.   .|...-+..... ++    +..
T Consensus        52 ~~~~~~l~l~~G~~VLDiG--CG~G~~a~~~a~~~g~~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~~-d~----~~~  124 (285)
T d1kpga_          52 DLALGKLGLQPGMTLLDVG--CGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLA-GW----EQF  124 (285)
T ss_dssp             HHHHTTTTCCTTCEEEEET--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEES-CG----GGC
T ss_pred             HHHHHHcCCCCCCEEEEec--CcchHHHHHHHhcCCcceEEEeccHHHHHHHHHHHHhhhhhhhhHHHHh-hh----hcc
Confidence            4455667899999999999  7788999999999999999999999998888733   222111111111 11    111


Q ss_pred             CCCCccEEEe-----CCCc----hhHHHHHHhhccCCEEEEEee
Q 026217          118 FPEGINIYFE-----NVGG----KMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       118 ~~~~~d~v~d-----~~g~----~~~~~~~~~l~~~G~~v~~g~  152 (241)
                       ++.+|.++.     .++.    ..++.+.++|+|+|+++.-..
T Consensus       125 -~~~fD~i~si~~~eh~~~~~~~~~~~~~~r~LkpgG~~~l~~i  167 (285)
T d1kpga_         125 -DEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTI  167 (285)
T ss_dssp             -CCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred             -cccccceeeehhhhhcCchhHHHHHHHHHhhcCCCCcEEEEEE
Confidence             246887753     3332    246778889999999986443

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.75  E-value=5.6e-05  Score=55.94  Aligned_cols=49  Identities=12%  Similarity=0.096  Sum_probs=43.9

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD   99 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~   99 (241)
                      +|.+++|+||++++|.+.++.+...|++|+++++++++.+.+.++++..
T Consensus         4 kGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~   52 (248)
T d2o23a1           4 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNN   52 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC
Confidence            6889999999999999999999999999999999988887777677653

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=97.73  E-value=0.0001  Score=55.06  Aligned_cols=112  Identities=18%  Similarity=0.290  Sum_probs=75.8

Q ss_pred             hcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHH---cCCCeeecCC
Q 026217           31 ILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKNK---FGFDEAFNYK  105 (241)
Q Consensus        31 ~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g--~~v~~~~~~~~~~~~~~~~---~g~~~~i~~~  105 (241)
                      ....+--.++  +...++++||++||=.|  .|.|..++.+|+..|  .+|++++.+++..+.+++.   +|....+...
T Consensus        85 qiiypkd~~~--Ii~~l~i~pG~~VLDiG--~GsG~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~  160 (266)
T d1o54a_          85 QIVYPKDSSF--IAMMLDVKEGDRIIDTG--VGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIK  160 (266)
T ss_dssp             CCCCHHHHHH--HHHHTTCCTTCEEEEEC--CTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEE
T ss_pred             cccchHHHHH--HHHhhCCCCCCEEEECC--CCCCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEE
Confidence            3344433333  33568999999999998  455888889999875  5999999999988887643   4442222111


Q ss_pred             CchhHHHHHHHHCCC-CccEEEeCCCc--hhHHHHHHhhccCCEEEEEe
Q 026217          106 EEPDLDAALKRYFPE-GINIYFENVGG--KMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       106 ~~~~~~~~i~~~~~~-~~d~v~d~~g~--~~~~~~~~~l~~~G~~v~~g  151 (241)
                      .. ++    ....+. .+|.|+--...  ..+..+.++|+|||+++.+.
T Consensus       161 ~~-d~----~~~~~~~~~D~V~~d~p~p~~~l~~~~~~LKpGG~lv~~~  204 (266)
T d1o54a_         161 VR-DI----SEGFDEKDVDALFLDVPDPWNYIDKCWEALKGGGRFATVC  204 (266)
T ss_dssp             CC-CG----GGCCSCCSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred             ec-cc----cccccccceeeeEecCCCHHHHHHHHHhhcCCCCEEEEEe
Confidence            11 21    112223 78887765553  57899999999999999763

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.72  E-value=9.3e-05  Score=55.74  Aligned_cols=104  Identities=13%  Similarity=0.129  Sum_probs=70.0

Q ss_pred             HHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCCeeecCCCchhHHHHHHH
Q 026217           40 YAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKR  116 (241)
Q Consensus        40 ~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~---~g~~~~i~~~~~~~~~~~i~~  116 (241)
                      +..+.+..+++||++||=+|  .|.|..+..+++..|++|++++.+++..+.+++.   .|....+..... +.    ++
T Consensus        41 ~~~~~~~l~l~~g~~VLDiG--CG~G~~a~~~a~~~g~~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~~-d~----~~  113 (280)
T d2fk8a1          41 VDLNLDKLDLKPGMTLLDIG--CGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQ-GW----ED  113 (280)
T ss_dssp             HHHHHTTSCCCTTCEEEEES--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEES-CG----GG
T ss_pred             HHHHHHHcCCCCCCEEEEec--CCchHHHHHHHHhCceeEEEecchHHHHHHHHHHHHhhccccchhhhhh-hh----hh
Confidence            44455667899999999999  5556677888889999999999999998887743   243211111111 11    11


Q ss_pred             HCCCCccEEEe-----CCCc----hhHHHHHHhhccCCEEEEEe
Q 026217          117 YFPEGINIYFE-----NVGG----KMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       117 ~~~~~~d~v~d-----~~g~----~~~~~~~~~l~~~G~~v~~g  151 (241)
                       .++.+|.|+.     -++.    ..++.+.++|+|+|++++-.
T Consensus       114 -~~~~fD~i~si~~~eh~~~~~~~~~f~~i~~~LkpgG~~~i~~  156 (280)
T d2fk8a1         114 -FAEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQS  156 (280)
T ss_dssp             -CCCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             -hccchhhhhHhhHHHHhhhhhHHHHHHHHHhccCCCceEEEEE
Confidence             1347888853     2232    24778899999999998643

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.69  E-value=0.00021  Score=53.89  Aligned_cols=103  Identities=15%  Similarity=0.184  Sum_probs=62.8

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEE---EEEeCCHHHHHH---HHHHcCC---C---eeecCCCchhHHHHHHHHCCC
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYV---VGSAGSKDKVDL---LKNKFGF---D---EAFNYKEEPDLDAALKRYFPE  120 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v---~~~~~~~~~~~~---~~~~~g~---~---~~i~~~~~~~~~~~i~~~~~~  120 (241)
                      ..|||+||++|+|++.++.+...|++|   +.+.++.+..+.   ..+++..   .   ...|..+..+....+.+...+
T Consensus         3 kVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g   82 (285)
T d1jtva_           3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEG   82 (285)
T ss_dssp             EEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTS
T ss_pred             CEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhcccc
Confidence            357899999999999999888888864   444544333222   2213322   1   134555542444444444456


Q ss_pred             CccEEEeCCCch-----------h---------------HHHHHHhhc--cCCEEEEEeeecc
Q 026217          121 GINIYFENVGGK-----------M---------------LDAVLLNMR--IQGRITLCGMISQ  155 (241)
Q Consensus       121 ~~d~v~d~~g~~-----------~---------------~~~~~~~l~--~~G~~v~~g~~~~  155 (241)
                      .+|+++++.|..           .               .+..+..|.  .+|+++.+++..+
T Consensus        83 ~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g  145 (285)
T d1jtva_          83 RVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGG  145 (285)
T ss_dssp             CCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGG
T ss_pred             chhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhh
Confidence            899999988731           1               133444453  3689999987655

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=97.66  E-value=2.6e-05  Score=57.78  Aligned_cols=78  Identities=13%  Similarity=0.207  Sum_probs=51.4

Q ss_pred             cEEEEEcCCchHHHHHHHHHH---HcCCEEEEEeCCHHHHHHHHH--HcCCC---eeecCCCchh---HHHHHHHHCC-C
Q 026217           53 EYVFVSAASGAVGQLVGQFAK---LVGCYVVGSAGSKDKVDLLKN--KFGFD---EAFNYKEEPD---LDAALKRYFP-E  120 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~---~~g~~v~~~~~~~~~~~~~~~--~~g~~---~~i~~~~~~~---~~~~i~~~~~-~  120 (241)
                      .+|||+||++|+|+++++.+.   ..|++|++++|++++.+.+++  +.+..   ...|..+..+   +.+.++.... +
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~   82 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQ   82 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGGG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhcC
Confidence            479999999999999887654   358899999999876655541  11221   1334444323   3344433333 4


Q ss_pred             CccEEEeCCC
Q 026217          121 GINIYFENVG  130 (241)
Q Consensus       121 ~~d~v~d~~g  130 (241)
                      ++|+++++.|
T Consensus        83 ~iDiLvnNAg   92 (248)
T d1snya_          83 GLNVLFNNAG   92 (248)
T ss_dssp             CCSEEEECCC
T ss_pred             CcceEEeecc
Confidence            7999999886

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=97.62  E-value=0.00027  Score=49.81  Aligned_cols=100  Identities=15%  Similarity=0.050  Sum_probs=67.4

Q ss_pred             HhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCee-----------------ecCCCc
Q 026217           45 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEA-----------------FNYKEE  107 (241)
Q Consensus        45 ~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~-----------------i~~~~~  107 (241)
                      ....+.||.+||..|  .|.|..++.+|++ |++|++++.|++-.+.+++..+....                 +.-+..
T Consensus        14 ~~l~~~~~~rvLd~G--CG~G~~a~~la~~-G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~   90 (201)
T d1pjza_          14 SSLNVVPGARVLVPL--CGKSQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFF   90 (201)
T ss_dssp             HHHCCCTTCEEEETT--TCCSHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCS
T ss_pred             HHcCCCCCCEEEEec--CcCCHHHHHHHHc-CCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceeccccc
Confidence            445789999999999  5678888888864 99999999999999999855432110                 000000


Q ss_pred             hhHHHHHHHHCCCCccEEEeCCCc---------hhHHHHHHhhccCCEEEEEee
Q 026217          108 PDLDAALKRYFPEGINIYFENVGG---------KMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       108 ~~~~~~i~~~~~~~~d~v~d~~g~---------~~~~~~~~~l~~~G~~v~~g~  152 (241)
                       ++.....    ..+|.|++...-         ..+..+.++|+++|+++....
T Consensus        91 -~l~~~~~----~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~LkpgG~l~l~~~  139 (201)
T d1pjza_          91 -ALTARDI----GHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITL  139 (201)
T ss_dssp             -SSTHHHH----HSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEE
T ss_pred             -ccccccc----cceeEEEEEeeeEecchhhhHHHHHHHHHhcCCCcEEEEEEc
Confidence             1111111    158998875431         246778889999999876543

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=97.61  E-value=0.00013  Score=54.68  Aligned_cols=81  Identities=7%  Similarity=0.067  Sum_probs=52.3

Q ss_pred             CCCcEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCHHH---HHHHHHHcCCCe--eecCCCchhHHHHHHHHC--CC
Q 026217           50 KQGEYVFVSAASG--AVGQLVGQFAKLVGCYVVGSAGSKDK---VDLLKNKFGFDE--AFNYKEEPDLDAALKRYF--PE  120 (241)
Q Consensus        50 ~~~~~vlI~ga~g--~~G~~avqla~~~g~~v~~~~~~~~~---~~~~~~~~g~~~--~i~~~~~~~~~~~i~~~~--~~  120 (241)
                      -+|.++||+||+|  ++|.+.++.+...|++|+++.++++.   .+.+.++.+...  ..|..++.+..+.+.+..  -+
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   82 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG   82 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcC
Confidence            3589999999876  79999999999999999999988643   333331222222  223333213332232221  14


Q ss_pred             CccEEEeCCC
Q 026217          121 GINIYFENVG  130 (241)
Q Consensus       121 ~~d~v~d~~g  130 (241)
                      .+|+++++.|
T Consensus        83 ~id~lV~nag   92 (274)
T d2pd4a1          83 SLDFIVHSVA   92 (274)
T ss_dssp             CEEEEEECCC
T ss_pred             CCCeEEeecc
Confidence            7999998887

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.59  E-value=0.00016  Score=52.58  Aligned_cols=96  Identities=20%  Similarity=0.227  Sum_probs=65.6

Q ss_pred             CCCCCcEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHc---CCC-----ee-ecCCCchhHHHHHHH
Q 026217           48 SPKQGEYVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDKVDLLKNKF---GFD-----EA-FNYKEEPDLDAALKR  116 (241)
Q Consensus        48 ~~~~~~~vlI~ga~g~~G~~avqla~~~g~--~v~~~~~~~~~~~~~~~~~---g~~-----~~-i~~~~~~~~~~~i~~  116 (241)
                      .++||++||-.|  .|.|..++.+|+..|.  +|+++..+++-.+.+++.+   +..     .+ +-..   +.....  
T Consensus        73 ~l~~g~~VLdiG--~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~g---D~~~~~--  145 (224)
T d1i1na_          73 QLHEGAKALDVG--SGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVG---DGRMGY--  145 (224)
T ss_dssp             TSCTTCEEEEET--CTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEES---CGGGCC--
T ss_pred             ccCCCCeEEEec--CCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEe---eccccc--
Confidence            789999999999  7788988899988763  8999999988777765333   211     11 0000   110000  


Q ss_pred             HCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEE
Q 026217          117 YFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLC  150 (241)
Q Consensus       117 ~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~  150 (241)
                      ...+.||.|+-+..- ......++.|++||+++..
T Consensus       146 ~~~~~fD~I~~~~~~~~ip~~l~~~LkpGG~LV~p  180 (224)
T d1i1na_         146 AEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILP  180 (224)
T ss_dssp             GGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             chhhhhhhhhhhcchhhcCHHHHhhcCCCcEEEEE
Confidence            011269999877664 5567889999999999874

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.55  E-value=0.00063  Score=47.09  Aligned_cols=95  Identities=12%  Similarity=0.065  Sum_probs=61.5

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCc
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG  131 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~  131 (241)
                      +.+|+|.|| |.+|..+++.+...|.+|+++.++.++.+.+.+.++...+.....  .......... ...|.++.+...
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~--~~~~~~~~~i-~~~~~~i~~~~~   77 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDV--NDDAALDAEV-AKHDLVISLIPY   77 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEEECCT--TCHHHHHHHH-TTSSEEEECSCG
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccccccc--cchhhhHhhh-hccceeEeeccc
Confidence            578999996 999999999998899999999999999998884555422221111  1111111111 147888887775


Q ss_pred             h-hHHHHHHhhccCCEEEEE
Q 026217          132 K-MLDAVLLNMRIQGRITLC  150 (241)
Q Consensus       132 ~-~~~~~~~~l~~~G~~v~~  150 (241)
                      . .......+...+..++.+
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~   97 (182)
T d1e5qa1          78 TFHATVIKSAIRQKKHVVTT   97 (182)
T ss_dssp             GGHHHHHHHHHHHTCEEECS
T ss_pred             hhhhHHHHHHHhhccceeec
Confidence            3 334444455556666554

>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein FLJ20628
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.53  E-value=8.3e-05  Score=57.08  Aligned_cols=104  Identities=15%  Similarity=0.211  Sum_probs=66.7

Q ss_pred             HhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHcCC-------------CeeecCCCchh
Q 026217           45 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDKVDLLKNKFGF-------------DEAFNYKEEPD  109 (241)
Q Consensus        45 ~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~--~v~~~~~~~~~~~~~~~~~g~-------------~~~i~~~~~~~  109 (241)
                      ..++++||++||=.|  .|.|.+++.+|+..|.  +|+.+..+++..+.+++.+..             ..-++.... +
T Consensus        92 ~~l~i~pG~rVLE~G--tGsG~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~~~~~-d  168 (324)
T d2b25a1          92 SMMDINPGDTVLEAG--SGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHK-D  168 (324)
T ss_dssp             HHHTCCTTCEEEEEC--CTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEES-C
T ss_pred             HHhCCCCCCEEEEec--ccccHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhccccceeEEec-c
Confidence            457999999999988  5669999999999875  899999999988887743210             000100000 1


Q ss_pred             HHHHHHHHCCCCccEEE-eCCCc-hhHHHHHHhhccCCEEEEEe
Q 026217          110 LDAALKRYFPEGINIYF-ENVGG-KMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       110 ~~~~i~~~~~~~~d~v~-d~~g~-~~~~~~~~~l~~~G~~v~~g  151 (241)
                      +.........+.+|.|| |.-.. ..+..+.+.|+|||+++.+.
T Consensus       169 i~~~~~~~~~~~fD~V~LD~p~P~~~l~~~~~~LKpGG~lv~~~  212 (324)
T d2b25a1         169 ISGATEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYV  212 (324)
T ss_dssp             TTCCC-------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEE
T ss_pred             hhhcccccCCCCcceEeecCcCHHHHHHHHHHhccCCCEEEEEe
Confidence            11111111123688776 43222 57889999999999999864

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.50  E-value=0.00083  Score=44.24  Aligned_cols=74  Identities=16%  Similarity=0.146  Sum_probs=55.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeee-cCCCchhHHHHHHHHCCCCccEEEeCCCch
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAF-NYKEEPDLDAALKRYFPEGINIYFENVGGK  132 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i-~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~  132 (241)
                      +|+|.|+ |.+|+..++.+...|..|++++.++++.+.++++++...+. |..+.    +.+++..-..+|.++-++..+
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~~vi~Gd~~~~----~~l~~~~i~~a~~vv~~t~~d   76 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKI----KTLEDAGIEDADMYIAVTGKE   76 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSH----HHHHHTTTTTCSEEEECCSCH
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhhhhccCcccch----hhhhhcChhhhhhhcccCCcH
Confidence            5899996 99999999999999999999999999999888566654322 23332    233333223799999988864

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=97.47  E-value=8.5e-05  Score=53.95  Aligned_cols=111  Identities=15%  Similarity=0.180  Sum_probs=67.1

Q ss_pred             hcCchhHHHHHHHHHh--cCCCCCcEEEEEcCCchHHHHHHHHHHHc---C----CEEEEEeCCHHHHHHHHHHc-----
Q 026217           31 ILGMPGMTAYAGFFEV--CSPKQGEYVFVSAASGAVGQLVGQFAKLV---G----CYVVGSAGSKDKVDLLKNKF-----   96 (241)
Q Consensus        31 ~l~~~~~ta~~~l~~~--~~~~~~~~vlI~ga~g~~G~~avqla~~~---g----~~v~~~~~~~~~~~~~~~~~-----   96 (241)
                      .+..+.+.|. .+ +.  ..++|+++||..|  ++.|..++.+++..   |    .+|+.+...++-.+.+++.+     
T Consensus        60 ~is~P~~~a~-~l-~~L~~~l~~g~~VLeIG--tGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~  135 (223)
T d1r18a_          60 TISAPHMHAF-AL-EYLRDHLKPGARILDVG--SGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDR  135 (223)
T ss_dssp             EECCHHHHHH-HH-HHTTTTCCTTCEEEEES--CTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHH
T ss_pred             eeehhhhHHH-HH-HHHhhccCCCCeEEEec--CCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcch
Confidence            3334444443 33 33  3789999999999  56677666666554   4    38999999887666665322     


Q ss_pred             ---CCCee-ecCCCchhHHHHHHHHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEE
Q 026217           97 ---GFDEA-FNYKEEPDLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLC  150 (241)
Q Consensus        97 ---g~~~~-i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~  150 (241)
                         +...+ +...+   ..+..  ...+.||.++-+.+- .......+.|++||+++..
T Consensus       136 ~~~~~~nv~~~~~d---~~~~~--~~~~~fD~Iiv~~a~~~~p~~l~~~Lk~gG~lV~p  189 (223)
T d1r18a_         136 SMLDSGQLLIVEGD---GRKGY--PPNAPYNAIHVGAAAPDTPTELINQLASGGRLIVP  189 (223)
T ss_dssp             HHHHHTSEEEEESC---GGGCC--GGGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEE
T ss_pred             hhcCccEEEEEecc---ccccc--ccccceeeEEEEeechhchHHHHHhcCCCcEEEEE
Confidence               11111 11111   11000  111379988776664 4557788999999999873

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.46  E-value=0.0013  Score=44.73  Aligned_cols=102  Identities=18%  Similarity=0.167  Sum_probs=74.8

Q ss_pred             HHHHHHHHHhcC-CCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHH
Q 026217           37 MTAYAGFFEVCS-PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALK  115 (241)
Q Consensus        37 ~ta~~~l~~~~~-~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~  115 (241)
                      .+.+.++.+..+ .-.|.+++|.| -|-+|.-.++.++.+|++|+++...|-+.-.+. --|.. +.      .+.+.+.
T Consensus         8 ~S~~~~~~r~t~~~l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~-~dG~~-v~------~~~~a~~   78 (163)
T d1li4a1           8 ESLIDGIKRATDVMIAGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPINALQAA-MEGYE-VT------TMDEACQ   78 (163)
T ss_dssp             HHHHHHHHHHHCCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCE-EC------CHHHHTT
T ss_pred             hhHHHHHHHHhCceecCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccchhHHhh-cCceE-ee------ehhhhhh
Confidence            345666666555 45899999999 699999999999999999999998876544443 33432 21      2333332


Q ss_pred             HHCCCCccEEEeCCCch--hHHHHHHhhccCCEEEEEee
Q 026217          116 RYFPEGINIYFENVGGK--MLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       116 ~~~~~~~d~v~d~~g~~--~~~~~~~~l~~~G~~v~~g~  152 (241)
                           ..|+++-++|+.  .-...++.|+++..++.+|-
T Consensus        79 -----~adivvtaTGn~~vI~~eh~~~MKdgaIL~N~Gh  112 (163)
T d1li4a1          79 -----EGNIFVTTTGCIDIILGRHFEQMKDDAIVCNIGH  112 (163)
T ss_dssp             -----TCSEEEECSSCSCSBCHHHHTTCCTTEEEEECSS
T ss_pred             -----hccEEEecCCCccchhHHHHHhccCCeEEEEecc
Confidence                 489999999973  44678888999888888875

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.46  E-value=0.00054  Score=47.76  Aligned_cols=82  Identities=16%  Similarity=0.133  Sum_probs=58.3

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCee-------ecCC---CchhHHHHHHHHCCCCc
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEA-------FNYK---EEPDLDAALKRYFPEGI  122 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~-------i~~~---~~~~~~~~i~~~~~~~~  122 (241)
                      .+|.|.|+ |.+|++....+...|..|++.++++++.+.++ +.+....       ....   .. +..+.+.     .+
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~e~~~-----~a   73 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQ-DRGAIIAEGPGLAGTAHPDLLTS-DIGLAVK-----DA   73 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HHTSEEEESSSCCEEECCSEEES-CHHHHHT-----TC
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HcCCCchhhhhhhhhhhhhhhhh-hhHhHhc-----CC
Confidence            57999996 99999999999999999999999999999888 5543111       0000   11 3344443     49


Q ss_pred             cEEEeCCCchhHHHHHHhhc
Q 026217          123 NIYFENVGGKMLDAVLLNMR  142 (241)
Q Consensus       123 d~v~d~~g~~~~~~~~~~l~  142 (241)
                      |+++-++........++.++
T Consensus        74 D~iii~v~~~~~~~~~~~i~   93 (184)
T d1bg6a2          74 DVILIVVPAIHHASIAANIA   93 (184)
T ss_dssp             SEEEECSCGGGHHHHHHHHG
T ss_pred             CEEEEEEchhHHHHHHHHhh
Confidence            99999998755555544444

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.46  E-value=0.00021  Score=51.95  Aligned_cols=71  Identities=21%  Similarity=0.170  Sum_probs=47.5

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHcCCCe-eecCCCchhHHHHHHHHCCCCccEEEeCC
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFENV  129 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~--~v~~~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~i~~~~~~~~d~v~d~~  129 (241)
                      .+|||+||+|.+|...++.+...|.  .|+...|++++...+.  -+... ..|..+...+.+.+     .++|.|+.++
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~-----~~~d~vi~~a   76 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIG--GEADVFIGDITDADSINPAF-----QGIDALVILT   76 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTT--CCTTEEECCTTSHHHHHHHH-----TTCSEEEECC
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhcc--CCcEEEEeeecccccccccc-----ccceeeEEEE
Confidence            5899999999999999999988885  6777888887766443  12221 22333321222222     2589999887


Q ss_pred             C
Q 026217          130 G  130 (241)
Q Consensus       130 g  130 (241)
                      +
T Consensus        77 ~   77 (252)
T d2q46a1          77 S   77 (252)
T ss_dssp             C
T ss_pred             e
Confidence            5

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.46  E-value=0.00025  Score=52.67  Aligned_cols=80  Identities=21%  Similarity=0.218  Sum_probs=52.3

Q ss_pred             CCcEEEEEcCCchHHHHHHHH-HHH--cCCEEEEEeCCHHHHHHHHHHcC---C-Ce----eecCCCchh---HHHHHHH
Q 026217           51 QGEYVFVSAASGAVGQLVGQF-AKL--VGCYVVGSAGSKDKVDLLKNKFG---F-DE----AFNYKEEPD---LDAALKR  116 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avql-a~~--~g~~v~~~~~~~~~~~~~~~~~g---~-~~----~i~~~~~~~---~~~~i~~  116 (241)
                      .|..++|+||++++|++.++. |+.  .|++|+.+++++++.+.+.+++.   . .+    ..|..++.+   +.+.+.+
T Consensus         5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~   84 (259)
T d1oaaa_           5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE   84 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            577899999999999987665 443  58999999999998877764442   1 11    234444312   2233333


Q ss_pred             HC--CC-CccEEEeCCC
Q 026217          117 YF--PE-GINIYFENVG  130 (241)
Q Consensus       117 ~~--~~-~~d~v~d~~g  130 (241)
                      ..  .+ ..|++++++|
T Consensus        85 ~~~~~~~~~~~lvnnag  101 (259)
T d1oaaa_          85 LPRPEGLQRLLLINNAA  101 (259)
T ss_dssp             SCCCTTCCEEEEEECCC
T ss_pred             hhhhccCceEEEEeccc
Confidence            32  22 6788888765

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=97.45  E-value=0.00035  Score=50.95  Aligned_cols=102  Identities=15%  Similarity=0.176  Sum_probs=69.5

Q ss_pred             HHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCCe--eecCCCchhHHHHHH
Q 026217           41 AGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDE--AFNYKEEPDLDAALK  115 (241)
Q Consensus        41 ~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~---~g~~~--~i~~~~~~~~~~~i~  115 (241)
                      ..+.+.+.++||++||=.|  .|.|..+..+++. +.+|++++.|+.-.+.+++.   .+.+.  .+.-+.. ++     
T Consensus         6 ~~l~~~~~~~~~~rILDiG--cGtG~~~~~la~~-~~~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~-~~-----   76 (234)
T d1xxla_           6 GLMIKTAECRAEHRVLDIG--AGAGHTALAFSPY-VQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAE-SL-----   76 (234)
T ss_dssp             HHHHHHHTCCTTCEEEEES--CTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTT-BC-----
T ss_pred             HHHHHHhCCCCCCEEEEeC--CcCcHHHHHHHHh-CCeEEEEeCChhhhhhhhhhhcccccccccccccccc-cc-----
Confidence            3456778999999999999  5677878887764 68999999999877777633   33321  1111111 10     


Q ss_pred             HHCCCCccEEEeCCCc-------hhHHHHHHhhccCCEEEEEe
Q 026217          116 RYFPEGINIYFENVGG-------KMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       116 ~~~~~~~d~v~d~~g~-------~~~~~~~~~l~~~G~~v~~g  151 (241)
                      ...++.||+|+.+-.-       ..++.+.++|+|+|+++...
T Consensus        77 ~~~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~~~~~~  119 (234)
T d1xxla_          77 PFPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVD  119 (234)
T ss_dssp             CSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cccccccceeeeeceeecccCHHHHHHHHHHeeCCCcEEEEEE
Confidence            1223479999864431       35788899999999988754

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.44  E-value=0.00067  Score=47.44  Aligned_cols=94  Identities=13%  Similarity=0.117  Sum_probs=58.0

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH---HHcC----C-CeeecCCCchhHHHHHHHHCCCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLK---NKFG----F-DEAFNYKEEPDLDAALKRYFPEG  121 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~---~~~g----~-~~~i~~~~~~~~~~~i~~~~~~~  121 (241)
                      .+.+|+|.|+ |+.|.+++..+...|+ +++++.|++++.+.+.   ++++    . ..+.+..+..++.+.+.     .
T Consensus        17 ~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~   90 (182)
T d1vi2a1          17 KGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALA-----S   90 (182)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH-----T
T ss_pred             CCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhc-----c
Confidence            6689999996 9999999988888998 8889998766544332   1222    1 12334443213333332     4


Q ss_pred             ccEEEeCCCchhH-------HHHHHhhccCCEEEEE
Q 026217          122 INIYFENVGGKML-------DAVLLNMRIQGRITLC  150 (241)
Q Consensus       122 ~d~v~d~~g~~~~-------~~~~~~l~~~G~~v~~  150 (241)
                      +|++++|+.-...       ..-...++++..++.+
T Consensus        91 ~diiIN~Tp~G~~~~~~~~~~~~~~~~~~~~~v~Di  126 (182)
T d1vi2a1          91 ADILTNGTKVGMKPLENESLVNDISLLHPGLLVTEC  126 (182)
T ss_dssp             CSEEEECSSTTSTTSCSCCSCCCGGGSCTTCEEEEC
T ss_pred             cceeccccCCccccccchhhhhHHHhhhcchhhHHh
Confidence            9999999863211       1112345666666655

>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Probable methyltransferase Rv2118c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.43  E-value=0.00051  Score=50.93  Aligned_cols=102  Identities=16%  Similarity=0.135  Sum_probs=71.3

Q ss_pred             HHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHcC------CCee-ecCCCchhHHHH
Q 026217           43 FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDKVDLLKNKFG------FDEA-FNYKEEPDLDAA  113 (241)
Q Consensus        43 l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~--~v~~~~~~~~~~~~~~~~~g------~~~~-i~~~~~~~~~~~  113 (241)
                      +...++++||++||=.|  .|.|.+++.+|+..|-  +|+.++.+++..+.+++.+.      .+.+ +...   +..+ 
T Consensus        88 Ii~~l~i~PG~~VLE~G--~GsG~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~~~---d~~~-  161 (264)
T d1i9ga_          88 IVHEGDIFPGARVLEAG--AGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVS---DLAD-  161 (264)
T ss_dssp             HHHHTTCCTTCEEEEEC--CTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECS---CGGG-
T ss_pred             HHHHhCCCCCCEEEecC--cCCcHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEEec---cccc-
Confidence            33557999999999988  6778899999999864  99999999998888874321      1111 1111   1111 


Q ss_pred             HHHHCCCCccEEEeCCCc--hhHHHHHHhhccCCEEEEEe
Q 026217          114 LKRYFPEGINIYFENVGG--KMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       114 i~~~~~~~~d~v~d~~g~--~~~~~~~~~l~~~G~~v~~g  151 (241)
                       ....++.||.||--...  ..+..+.++|+++|+++.+.
T Consensus       162 -~~~~~~~fDaV~ldlp~P~~~l~~~~~~LkpGG~lv~~~  200 (264)
T d1i9ga_         162 -SELPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYV  200 (264)
T ss_dssp             -CCCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             -ccccCCCcceEEEecCCHHHHHHHHHhccCCCCEEEEEe
Confidence             01122379977654443  67889999999999998864

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=97.41  E-value=0.00051  Score=48.24  Aligned_cols=100  Identities=16%  Similarity=0.179  Sum_probs=66.1

Q ss_pred             HhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCC-eeecCCCchhHHHHHHHHCCC
Q 026217           45 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFD-EAFNYKEEPDLDAALKRYFPE  120 (241)
Q Consensus        45 ~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~---~~g~~-~~i~~~~~~~~~~~i~~~~~~  120 (241)
                      ...++++|++||=.|  .|.|..++.+|+. +.+|++++.+++..+.+++   ++|.. .+ ..... +..+...  ..+
T Consensus        27 ~~l~~~~g~~VLDiG--cGsG~~s~~lA~~-~~~V~avD~~~~~l~~a~~n~~~~gl~~~v-~~~~g-da~~~~~--~~~   99 (186)
T d1l3ia_          27 CLAEPGKNDVAVDVG--CGTGGVTLELAGR-VRRVYAIDRNPEAISTTEMNLQRHGLGDNV-TLMEG-DAPEALC--KIP   99 (186)
T ss_dssp             HHHCCCTTCEEEEES--CTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCCTTE-EEEES-CHHHHHT--TSC
T ss_pred             HhcCCCCCCEEEEEE--CCeEccccccccc-ceEEEEecCCHHHHHHHHHHHHHcCCCcce-EEEEC-chhhccc--ccC
Confidence            346899999999998  4556666777664 5699999999998877774   34542 22 11111 3322221  123


Q ss_pred             CccEEEeCCCc----hhHHHHHHhhccCCEEEEEe
Q 026217          121 GINIYFENVGG----KMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       121 ~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~g  151 (241)
                      .+|.|+...+.    +.+..+.+.|+++|+++...
T Consensus       100 ~~D~v~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~  134 (186)
T d1l3ia_         100 DIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTA  134 (186)
T ss_dssp             CEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             CcCEEEEeCccccchHHHHHHHHHhCcCCEEEEEe
Confidence            79988865442    45777888999999988653

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.41  E-value=0.00038  Score=48.26  Aligned_cols=74  Identities=12%  Similarity=0.016  Sum_probs=52.3

Q ss_pred             CCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC-eeecCCCchhHHHHHHHHCCCCccEEEe
Q 026217           49 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEPDLDAALKRYFPEGINIYFE  127 (241)
Q Consensus        49 ~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~-~~i~~~~~~~~~~~i~~~~~~~~d~v~d  127 (241)
                      ..++.+|+|.|+ |+.+.+++..+...+.+|+++.|+.++.+.+.+.++.. .+.....  +      ......+|++++
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~--~------~~~~~~~diiIN   85 (171)
T d1p77a1          15 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSM--D------SIPLQTYDLVIN   85 (171)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEG--G------GCCCSCCSEEEE
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhh--c------cccccccceeee
Confidence            447889999996 99999998887776779999999999888887566431 1111111  0      111136999999


Q ss_pred             CCCc
Q 026217          128 NVGG  131 (241)
Q Consensus       128 ~~g~  131 (241)
                      |++.
T Consensus        86 ~tp~   89 (171)
T d1p77a1          86 ATSA   89 (171)
T ss_dssp             CCCC
T ss_pred             cccc
Confidence            9974

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=97.37  E-value=0.00046  Score=51.20  Aligned_cols=36  Identities=11%  Similarity=0.115  Sum_probs=32.3

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK   88 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~   88 (241)
                      .+.||+||++++|.+.++.+...|++|+.+.++.++
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~   37 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEG   37 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchH
Confidence            467999999999999999999999999999987543

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.37  E-value=0.00013  Score=53.16  Aligned_cols=99  Identities=6%  Similarity=-0.073  Sum_probs=66.5

Q ss_pred             CCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC-eeecCCCchhHHHHHHHHCCCCccEE-E
Q 026217           49 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEPDLDAALKRYFPEGINIY-F  126 (241)
Q Consensus        49 ~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~-~~i~~~~~~~~~~~i~~~~~~~~d~v-~  126 (241)
                      ..+|.+||-+|  .|.|..+..++++.+.+|++++.+++-.+.+++..... ..+..... +.........++.||.+ +
T Consensus        51 ~~~g~~VLdIG--cG~G~~a~~~a~~~~~~v~~id~s~~~~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~fD~i~f  127 (229)
T d1zx0a1          51 SSKGGRVLEVG--FGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKG-LWEDVAPTLPDGHFDGILY  127 (229)
T ss_dssp             TTTCEEEEEEC--CTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEES-CHHHHGGGSCTTCEEEEEE
T ss_pred             ccCCCeEEEee--ccchHHHHHHHHcCCCeEEEeCCCHHHHHHHHHHhhhcccccccccc-cccccccccccccccceee
Confidence            36789999999  67788888888877679999999999999998443221 11111111 33333344444589987 4


Q ss_pred             eCCCc-----------hhHHHHHHhhccCCEEEEE
Q 026217          127 ENVGG-----------KMLDAVLLNMRIQGRITLC  150 (241)
Q Consensus       127 d~~g~-----------~~~~~~~~~l~~~G~~v~~  150 (241)
                      |....           ..+..+.++|+|||+++..
T Consensus       128 D~~~~~~~~~~~~~~~~~~~~~~r~LkpGG~~~~~  162 (229)
T d1zx0a1         128 DTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC  162 (229)
T ss_dssp             CCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred             cccccccccccccCHHHHHHHHHHHcCCCcEEEEE
Confidence            65532           1345678899999999764

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=97.35  E-value=0.00038  Score=50.86  Aligned_cols=92  Identities=17%  Similarity=0.146  Sum_probs=66.5

Q ss_pred             CCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeC
Q 026217           49 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFEN  128 (241)
Q Consensus        49 ~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~  128 (241)
                      +.++.+||=.|  .|.|..+..+++ .|++|++++.+++..+.++ +-+....+..+.. ++     ...++.+|+|+..
T Consensus        40 ~~~~~~vLDiG--cG~G~~~~~l~~-~~~~v~giD~s~~~l~~a~-~~~~~~~~~~~~~-~l-----~~~~~~fD~ii~~  109 (246)
T d2avna1          40 LKNPCRVLDLG--GGTGKWSLFLQE-RGFEVVLVDPSKEMLEVAR-EKGVKNVVEAKAE-DL-----PFPSGAFEAVLAL  109 (246)
T ss_dssp             CCSCCEEEEET--CTTCHHHHHHHT-TTCEEEEEESCHHHHHHHH-HHTCSCEEECCTT-SC-----CSCTTCEEEEEEC
T ss_pred             cCCCCEEEEEC--CCCchhcccccc-cceEEEEeecccccccccc-ccccccccccccc-cc-----ccccccccceeee
Confidence            56788999888  558888888876 5899999999999999999 6555544443332 22     1223479998865


Q ss_pred             CCc--------hhHHHHHHhhccCCEEEEE
Q 026217          129 VGG--------KMLDAVLLNMRIQGRITLC  150 (241)
Q Consensus       129 ~g~--------~~~~~~~~~l~~~G~~v~~  150 (241)
                      ...        ..+..+.++|++||.++..
T Consensus       110 ~~~~~~~~d~~~~l~~i~r~Lk~gG~~ii~  139 (246)
T d2avna1         110 GDVLSYVENKDKAFSEIRRVLVPDGLLIAT  139 (246)
T ss_dssp             SSHHHHCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cchhhhhhhHHHHHHHHHhhcCcCcEEEEE
Confidence            431        3567888999999988764

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=97.34  E-value=0.0016  Score=43.98  Aligned_cols=83  Identities=18%  Similarity=0.231  Sum_probs=57.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCch
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGK  132 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g-~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~  132 (241)
                      +|.+.|+ |.+|.+.++-....| .+|++.++++++.+.+.+++|.. +.+..+.      +     ...|+||=|+-..
T Consensus         2 kI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~-~~~~~~~------v-----~~~Div~lavkP~   68 (152)
T d1yqga2           2 NVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVE-TSATLPE------L-----HSDDVLILAVKPQ   68 (152)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCE-EESSCCC------C-----CTTSEEEECSCHH
T ss_pred             EEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcccc-ccccccc------c-----cccceEEEecCHH
Confidence            4788995 999998877444444 79999999999998888677764 2222111      1     1478888888766


Q ss_pred             hHHHHHHhhccCCEEEE
Q 026217          133 MLDAVLLNMRIQGRITL  149 (241)
Q Consensus       133 ~~~~~~~~l~~~G~~v~  149 (241)
                      .+...++-+.+.++++.
T Consensus        69 ~~~~v~~~l~~~~~~vi   85 (152)
T d1yqga2          69 DMEAACKNIRTNGALVL   85 (152)
T ss_dssp             HHHHHHTTCCCTTCEEE
T ss_pred             HHHHhHHHHhhcccEEe
Confidence            66777766666665543

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=97.32  E-value=0.0007  Score=50.02  Aligned_cols=81  Identities=11%  Similarity=0.208  Sum_probs=52.8

Q ss_pred             CCCcEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCCeee--cCCCchhHHHHHHHHCC--C
Q 026217           50 KQGEYVFVSAASG--AVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDEAF--NYKEEPDLDAALKRYFP--E  120 (241)
Q Consensus        50 ~~~~~vlI~ga~g--~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~---~~g~~~~i--~~~~~~~~~~~i~~~~~--~  120 (241)
                      -.|.++||+||++  ++|.+.+..+...|++|+.+.++++..+.+.+   ..+....+  +..+..+....+.+...  +
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP   82 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhccc
Confidence            3689999999988  78999999999999999999988665544431   23333222  22222123333333322  3


Q ss_pred             CccEEEeCCC
Q 026217          121 GINIYFENVG  130 (241)
Q Consensus       121 ~~d~v~d~~g  130 (241)
                      ..|+++++++
T Consensus        83 ~~d~~v~~a~   92 (258)
T d1qsga_          83 KFDGFVHSIG   92 (258)
T ss_dssp             SEEEEEECCC
T ss_pred             ccceEEEeec
Confidence            7899998765

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=97.31  E-value=0.00011  Score=55.44  Aligned_cols=102  Identities=5%  Similarity=-0.051  Sum_probs=70.0

Q ss_pred             HHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCC---eeecCCCchhHHHHHHH
Q 026217           43 FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFD---EAFNYKEEPDLDAALKR  116 (241)
Q Consensus        43 l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~---~g~~---~~i~~~~~~~~~~~i~~  116 (241)
                      +.....++++++||=+|  .|.|..+..++++.|++|++++.++...+.+++.   .|..   .++..+-. ++     .
T Consensus        59 l~~~~~l~~~~~vLDiG--cG~G~~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~-~l-----~  130 (282)
T d2o57a1          59 LAMTGVLQRQAKGLDLG--AGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFL-EI-----P  130 (282)
T ss_dssp             HHHTTCCCTTCEEEEET--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTT-SC-----S
T ss_pred             HHHhcCCCCCCEEEEeC--CCCcHHHhhhhccCCcEEEEEeccchhhhhhhcccccccccccccccccccc-cc-----c
Confidence            44456799999999999  5577788889988899999999999887777632   2332   12211111 11     1


Q ss_pred             HCCCCccEEEeCCC-------chhHHHHHHhhccCCEEEEEee
Q 026217          117 YFPEGINIYFENVG-------GKMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       117 ~~~~~~d~v~d~~g-------~~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      ..++.||+|+..-.       ...+..+.++|+|+|+++....
T Consensus       131 ~~~~sfD~V~~~~~l~h~~d~~~~l~~~~~~LkpgG~l~~~~~  173 (282)
T d2o57a1         131 CEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDP  173 (282)
T ss_dssp             SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ccccccchhhccchhhhccCHHHHHHHHHHhcCCCcEEEEEEe
Confidence            12247999975332       1367889999999999987654

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=97.30  E-value=0.00065  Score=50.43  Aligned_cols=82  Identities=11%  Similarity=0.208  Sum_probs=55.7

Q ss_pred             CCCCcEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHHcCCCe---eecCCCch---hHHHHHHHHCC
Q 026217           49 PKQGEYVFVSAAS--GAVGQLVGQFAKLVGCYVVGSAGSKDKV-DLLKNKFGFDE---AFNYKEEP---DLDAALKRYFP  119 (241)
Q Consensus        49 ~~~~~~vlI~ga~--g~~G~~avqla~~~g~~v~~~~~~~~~~-~~~~~~~g~~~---~i~~~~~~---~~~~~i~~~~~  119 (241)
                      +-.|.+++|+||+  .++|.+.++-+...|++|+.+.++.++. +.+.++++...   ..|..++.   ++.+.+.+..+
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~   82 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIG   82 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhccc
Confidence            4468899999964  4699999999999999999999877664 44554565431   22333321   33344444322


Q ss_pred             --CCccEEEeCCC
Q 026217          120 --EGINIYFENVG  130 (241)
Q Consensus       120 --~~~d~v~d~~g  130 (241)
                        +.+|++++++|
T Consensus        83 ~~~~ld~~i~~ag   95 (268)
T d2h7ma1          83 AGNKLDGVVHSIG   95 (268)
T ss_dssp             TTCCEEEEEECCC
T ss_pred             cCCCcceeeeccc
Confidence              37999999887

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=97.27  E-value=0.00065  Score=49.16  Aligned_cols=101  Identities=16%  Similarity=0.197  Sum_probs=68.3

Q ss_pred             HHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCCe--eecCCCchhHHHHHHHH
Q 026217           43 FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDE--AFNYKEEPDLDAALKRY  117 (241)
Q Consensus        43 l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~---~g~~~--~i~~~~~~~~~~~i~~~  117 (241)
                      +.+.++++++++||=.|  .|.|..+..+++ .|.+|++++.+++-.+.+++.   .+.+.  ++..+.. ++     ..
T Consensus         7 ll~~~~l~~~~rVLDiG--cG~G~~~~~l~~-~~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~-~l-----~~   77 (231)
T d1vl5a_           7 LMQIAALKGNEEVLDVA--TGGGHVANAFAP-FVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAE-QM-----PF   77 (231)
T ss_dssp             HHHHHTCCSCCEEEEET--CTTCHHHHHHGG-GSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC--CC-----CS
T ss_pred             HHHhcCCCCcCEEEEec--ccCcHHHHHHHH-hCCEEEEEECCHHHHhhhhhcccccccccccccccccc-cc-----cc
Confidence            34668999999999999  447777777764 478999999999877777632   34332  2222111 11     12


Q ss_pred             CCCCccEEEeCCC-------chhHHHHHHhhccCCEEEEEee
Q 026217          118 FPEGINIYFENVG-------GKMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       118 ~~~~~d~v~d~~g-------~~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      .++.||+|+..-.       ...+..+.++|+|||+++....
T Consensus        78 ~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~  119 (231)
T d1vl5a_          78 TDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDN  119 (231)
T ss_dssp             CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             cccccccccccccccccCCHHHHHHHHHHhcCCCcEEEEEeC
Confidence            2347999986543       1357889999999999998643

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=97.25  E-value=0.002  Score=43.47  Aligned_cols=85  Identities=9%  Similarity=0.135  Sum_probs=64.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCchh
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKM  133 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~  133 (241)
                      +|.+.| +|.+|.+.+.-....|.++++..+++++.+.+.+++|....-      +..+.+.     ..|+||=|+-...
T Consensus         2 kIg~IG-~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~~~------~~~~~~~-----~~dvIilavkp~~   69 (152)
T d2ahra2           2 KIGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAM------SHQDLID-----QVDLVILGIKPQL   69 (152)
T ss_dssp             EEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCS------SHHHHHH-----TCSEEEECSCGGG
T ss_pred             EEEEEe-ccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceeeec------hhhhhhh-----ccceeeeecchHh
Confidence            478889 599999888866677889999999999888876578864321      3333343     4899999998777


Q ss_pred             HHHHHHhhccCCEEEEE
Q 026217          134 LDAVLLNMRIQGRITLC  150 (241)
Q Consensus       134 ~~~~~~~l~~~G~~v~~  150 (241)
                      +...+..++++..++.+
T Consensus        70 ~~~vl~~l~~~~~iis~   86 (152)
T d2ahra2          70 FETVLKPLHFKQPIISM   86 (152)
T ss_dssp             HHHHHTTSCCCSCEEEC
T ss_pred             HHHHhhhcccceeEecc
Confidence            88888888877766654

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=97.24  E-value=0.00054  Score=50.59  Aligned_cols=95  Identities=16%  Similarity=0.120  Sum_probs=64.3

Q ss_pred             CCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCC-eeecCCCchhHHHHHHHHCCCCcc
Q 026217           48 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFD-EAFNYKEEPDLDAALKRYFPEGIN  123 (241)
Q Consensus        48 ~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~---~~g~~-~~i~~~~~~~~~~~i~~~~~~~~d  123 (241)
                      ..++|++||=.|  .|.|..++.++ +.|++|++++.++...+.+++   ..|.. .++..    +..+.   ...+.+|
T Consensus       117 ~~~~g~~VLDiG--cGsG~l~i~aa-~~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~----d~~~~---~~~~~fD  186 (254)
T d2nxca1         117 HLRPGDKVLDLG--TGSGVLAIAAE-KLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEG----SLEAA---LPFGPFD  186 (254)
T ss_dssp             HCCTTCEEEEET--CTTSHHHHHHH-HTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEES----CHHHH---GGGCCEE
T ss_pred             hcCccCEEEEcc--cchhHHHHHHH-hcCCEEEEEECChHHHHHHHHHHHHcCCceeEEec----ccccc---ccccccc
Confidence            368999999998  33466666544 578999999999998887773   23443 22211    33222   2224799


Q ss_pred             EEEeCCCc----hhHHHHHHhhccCCEEEEEee
Q 026217          124 IYFENVGG----KMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       124 ~v~d~~g~----~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      +|+.....    ..+..+.++|+|+|+++..|.
T Consensus       187 ~V~ani~~~~l~~l~~~~~~~LkpGG~lilSgi  219 (254)
T d2nxca1         187 LLVANLYAELHAALAPRYREALVPGGRALLTGI  219 (254)
T ss_dssp             EEEEECCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             hhhhccccccHHHHHHHHHHhcCCCcEEEEEec
Confidence            99876553    345677789999999998665

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.17  E-value=0.0025  Score=43.56  Aligned_cols=85  Identities=16%  Similarity=0.155  Sum_probs=57.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC-CeeecCCCchhHHHHHHHHCCCCccEEEeCCCch
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF-DEAFNYKEEPDLDAALKRYFPEGINIYFENVGGK  132 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~-~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~  132 (241)
                      +|.|.|+ |.+|......++..|.+|++.+++++..+.++ +.|. +...+..      +.+     ..+|+|+-|+..+
T Consensus         2 kI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~-~~~~~~~~~~~~------~~~-----~~~DiIilavp~~   68 (165)
T d2f1ka2           2 KIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAV-ERQLVDEAGQDL------SLL-----QTAKIIFLCTPIQ   68 (165)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTSCSEEESCG------GGG-----TTCSEEEECSCHH
T ss_pred             EEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHH-Hhhccceeeeec------ccc-----cccccccccCcHh
Confidence            5889995 99999888888889999999999999999888 7775 3332211      112     1488888888644


Q ss_pred             hHHHHH----HhhccCCEEEEEe
Q 026217          133 MLDAVL----LNMRIQGRITLCG  151 (241)
Q Consensus       133 ~~~~~~----~~l~~~G~~v~~g  151 (241)
                      .....+    +.+.++..++.++
T Consensus        69 ~~~~vl~~l~~~l~~~~iv~~~~   91 (165)
T d2f1ka2          69 LILPTLEKLIPHLSPTAIVTDVA   91 (165)
T ss_dssp             HHHHHHHHHGGGSCTTCEEEECC
T ss_pred             hhhhhhhhhhhhcccccceeecc
Confidence            333333    3344444444443

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=97.17  E-value=0.00053  Score=51.41  Aligned_cols=40  Identities=15%  Similarity=0.144  Sum_probs=32.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHH
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS-KDKVDLLK   93 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~-~~~~~~~~   93 (241)
                      .++|+||++++|++.++.+...|++|+++.++ +++.+.+.
T Consensus         4 VAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~   44 (284)
T d1e7wa_           4 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALS   44 (284)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHH
Confidence            46899999999999999999999999887654 44444443

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=97.16  E-value=0.00052  Score=52.97  Aligned_cols=46  Identities=30%  Similarity=0.296  Sum_probs=40.3

Q ss_pred             CCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 026217           48 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK   93 (241)
Q Consensus        48 ~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~   93 (241)
                      -+.+|.+|||+||+|-+|...++.+...|.+|++++|+.++.+.++
T Consensus         7 ~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~   52 (342)
T d1y1pa1           7 VLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQ   52 (342)
T ss_dssp             SSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred             CCCCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHH
Confidence            4678999999999999999999988888999999999887766654

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.09  E-value=0.0013  Score=43.46  Aligned_cols=76  Identities=16%  Similarity=0.119  Sum_probs=49.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCch
Q 026217           54 YVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGK  132 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~-g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~  132 (241)
                      +|.|.|++|-+|+..++..... ++++++.....+......                         ..++|+++|++-.+
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~~~~~-------------------------~~~~DvvIDFS~p~   55 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLT-------------------------DGNTEVVIDFTHPD   55 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCTHHHH-------------------------TTTCSEEEECCCTT
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCchhhhc-------------------------cccCCEEEEcccHH
Confidence            5899999999999988887665 677776653222111111                         12477777777766


Q ss_pred             hHHHHHHhhccCCEEEEEeeec
Q 026217          133 MLDAVLLNMRIQGRITLCGMIS  154 (241)
Q Consensus       133 ~~~~~~~~l~~~G~~v~~g~~~  154 (241)
                      .....++.+...|.-+.+|.++
T Consensus        56 ~~~~~~~~~~~~~~~~ViGTTG   77 (135)
T d1yl7a1          56 VVMGNLEFLIDNGIHAVVGTTG   77 (135)
T ss_dssp             THHHHHHHHHHTTCEEEECCCC
T ss_pred             HHHHHHHHHHhcCCCEEEeccc
Confidence            6666666666666666666644

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=97.08  E-value=0.013  Score=39.04  Aligned_cols=94  Identities=19%  Similarity=0.167  Sum_probs=60.6

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCH--HHH-HHHHHHcCCCeeecCCCchhHHHHHHH-----------
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSK--DKV-DLLKNKFGFDEAFNYKEEPDLDAALKR-----------  116 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~--g~~v~~~~~~~--~~~-~~~~~~~g~~~~i~~~~~~~~~~~i~~-----------  116 (241)
                      .+|.|.|++|++|..+.++.+..  .++|++.+...  +.+ +.++ +|....++-.++. . ...+..           
T Consensus         3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~-ef~Pk~v~i~d~~-~-~~~l~~~~~~~~~~v~~   79 (150)
T d1r0ka2           3 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAK-RTNAKRAVIADPS-L-YNDLKEALAGSSVEAAA   79 (150)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHH-HTTCSEEEESCGG-G-HHHHHHHTTTCSSEEEE
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHH-hhccccceeccHH-H-HHHHHHHhhhccccccc
Confidence            68999999999999999999887  46877777442  233 3344 7777654433321 1 111111           


Q ss_pred             -------HCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEE
Q 026217          117 -------YFPEGINIYFENVGG-KMLDAVLLNMRIQGRITL  149 (241)
Q Consensus       117 -------~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~  149 (241)
                             .....+|+++.++.+ ..+...+..++.+-++..
T Consensus        80 g~~~l~~~~~~~~D~vv~Ai~G~~GL~~tl~ai~~gk~iaL  120 (150)
T d1r0ka2          80 GADALVEAAMMGADWTMAAIIGCAGLKATLAAIRKGKTVAL  120 (150)
T ss_dssp             SHHHHHHHHTSCCSEEEECCCSGGGHHHHHHHHHTTSEEEE
T ss_pred             CccchheecccccceeeeecCchhHHHHHHHHHhcCCEEEE
Confidence                   111258999988754 677777777777766555

>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.05  E-value=0.0017  Score=51.05  Aligned_cols=102  Identities=22%  Similarity=0.317  Sum_probs=67.6

Q ss_pred             HHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH----------cCCC----ee---ecC
Q 026217           43 FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNK----------FGFD----EA---FNY  104 (241)
Q Consensus        43 l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~----------~g~~----~~---i~~  104 (241)
                      +.+..+++||++++=+|  .|+|..+.++|+..|+ +|++++.++...+.+++.          +|..    ..   .+.
T Consensus       208 Il~~l~Lkpgd~fLDLG--CG~G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~~~~~f  285 (406)
T d1u2za_         208 VYQQCQLKKGDTFMDLG--SGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSF  285 (406)
T ss_dssp             HHHHTTCCTTCEEEEES--CTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCS
T ss_pred             HHHHhCCCCCCEEEeCC--CCCcHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccccceeeeeech
Confidence            33667999999998888  8899999999999987 899999998877766521          1111    11   011


Q ss_pred             CCchhHHHHHHHHCCCCccEEEeCC---Cc---hhHHHHHHhhccCCEEEEEe
Q 026217          105 KEEPDLDAALKRYFPEGINIYFENV---GG---KMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       105 ~~~~~~~~~i~~~~~~~~d~v~d~~---g~---~~~~~~~~~l~~~G~~v~~g  151 (241)
                      ... +..+...    ..+|+++-..   +.   ..+..+.+.|++||+++..-
T Consensus       286 ~~~-~~~d~~~----~~adVV~inn~~f~~~l~~~L~ei~r~LKPGGrIVs~~  333 (406)
T d1u2za_         286 VDN-NRVAELI----PQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLK  333 (406)
T ss_dssp             TTC-HHHHHHG----GGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             hhc-ccccccc----ccceEEEEecccCchHHHHHHHHHHHhcCCCcEEEEec
Confidence            111 2222221    1377776422   11   35678888999999998753

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.02  E-value=0.00052  Score=46.18  Aligned_cols=54  Identities=20%  Similarity=0.279  Sum_probs=38.6

Q ss_pred             CCccceEEeecCCceeeecCCCCCc----chhhhhcCchhHHH-HHHHHHhcCCCCCcEEEE
Q 026217            1 MTGWEEYSLVTAPRLFKIQHTDMPL----SYYTGILGMPGMTA-YAGFFEVCSPKQGEYVFV   57 (241)
Q Consensus         1 ~G~~ae~~~v~~~~~~~i~P~~~~~----~~~~a~l~~~~~ta-~~~l~~~~~~~~~~~vlI   57 (241)
                      +|+|+||.+++...+.++ |...+.    ....+++...++|| |..+.  ...+.|++|++
T Consensus        88 ~~gw~ey~v~~~~~l~kv-~~~~~~~~~~~~~~~~lG~~Gmtaay~gl~--~~~k~Getvv~  146 (147)
T d1v3va1          88 QSGWTTHFISDGKGLEKL-LTEWPDKKIQYHEHVTKGFENMPAAFIEML--NGANLGKAVVT  146 (147)
T ss_dssp             CCCSBSEEEECSSSCEEC-CTTCCTTSSCCCEEEEECGGGHHHHHHHHH--TTCCSSEEEEE
T ss_pred             ccCCEeEEEeccceeeEc-cccccccccchhhhHhccccchHHHHHHhh--CCCCCCCEEEe
Confidence            478999999999999999 654321    11356777788885 44553  34578999987

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=97.01  E-value=0.0016  Score=49.00  Aligned_cols=38  Identities=13%  Similarity=0.184  Sum_probs=33.4

Q ss_pred             CCcEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCHHH
Q 026217           51 QGEYVFVSAASG--AVGQLVGQFAKLVGCYVVGSAGSKDK   88 (241)
Q Consensus        51 ~~~~vlI~ga~g--~~G~~avqla~~~g~~v~~~~~~~~~   88 (241)
                      +|.++||+||+|  |+|++.++.+...|++|+++.++++.
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~   46 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPAL   46 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhh
Confidence            678999999876  89999999999999999999876543

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=96.96  E-value=0.0035  Score=45.22  Aligned_cols=102  Identities=11%  Similarity=0.071  Sum_probs=70.5

Q ss_pred             hcCCCCCcEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHH---cCCCeeecCCCchhHHHHHHHH---
Q 026217           46 VCSPKQGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRY---  117 (241)
Q Consensus        46 ~~~~~~~~~vlI~ga~g~~G~~avqla~~~--g~~v~~~~~~~~~~~~~~~~---~g~~~~i~~~~~~~~~~~i~~~---  117 (241)
                      ........+||-+|  +.+|..++.+|+.+  +.+|+.+..+++..+.+++.   .|...-+..... +..+.+.++   
T Consensus        54 L~~~~~~k~iLEiG--T~~GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~g-~a~~~L~~l~~~  130 (227)
T d1susa1          54 LLKLINAKNTMEIG--VYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREG-PALPVLDEMIKD  130 (227)
T ss_dssp             HHHHHTCCEEEEEC--CGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEES-CHHHHHHHHHHC
T ss_pred             HHHhcCCCcEEEec--chhhhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceeeeeh-HHHHHHHHHHhc
Confidence            34555678899999  88999999999987  46999999999887777633   355432222222 333333333   


Q ss_pred             --CCCCccEEE-eCCCc---hhHHHHHHhhccCCEEEEE
Q 026217          118 --FPEGINIYF-ENVGG---KMLDAVLLNMRIQGRITLC  150 (241)
Q Consensus       118 --~~~~~d~v~-d~~g~---~~~~~~~~~l~~~G~~v~~  150 (241)
                        ..+.||+|| |+--.   ..+..+++++++||.++.-
T Consensus       131 ~~~~~~fD~iFiDa~k~~y~~~~e~~~~ll~~gGiii~D  169 (227)
T d1susa1         131 EKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYD  169 (227)
T ss_dssp             GGGTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEE
T ss_pred             cccCCceeEEEeccchhhhHHHHHHHHhhcCCCcEEEEc
Confidence              234799886 54433   4678899999999988875

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=96.96  E-value=0.0015  Score=49.74  Aligned_cols=73  Identities=18%  Similarity=0.289  Sum_probs=47.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-----CHHHHHHHHHHcCCCee--ecCCCchhHHHHHHHHCCCCccEEE
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAG-----SKDKVDLLKNKFGFDEA--FNYKEEPDLDAALKRYFPEGINIYF  126 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~-----~~~~~~~~~~~~g~~~~--i~~~~~~~~~~~i~~~~~~~~d~v~  126 (241)
                      +|||+||+|-+|...++.+...|.+|+++++     ..++.+.+. ..+.-.+  .|..+...+.+.+...   ++|+|+
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~-~~~~~~~i~~Di~~~~~l~~~~~~~---~~d~Vi   77 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLS-SLGNFEFVHGDIRNKNDVTRLITKY---MPDSCF   77 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHH-TTCCCEEEECCTTCHHHHHHHHHHH---CCSEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhh-ccCCcEEEEcccCCHHHHHHHHHhc---CCceEE
Confidence            6999999999999999999888999999862     122334444 3322122  2334331343333322   689999


Q ss_pred             eCCC
Q 026217          127 ENVG  130 (241)
Q Consensus       127 d~~g  130 (241)
                      .+++
T Consensus        78 h~aa   81 (338)
T d1orra_          78 HLAG   81 (338)
T ss_dssp             ECCC
T ss_pred             eecc
Confidence            9886

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.94  E-value=0.0023  Score=46.23  Aligned_cols=104  Identities=16%  Similarity=0.122  Sum_probs=68.3

Q ss_pred             HhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCee------------ecCCCc-----
Q 026217           45 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEA------------FNYKEE-----  107 (241)
Q Consensus        45 ~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~------------i~~~~~-----  107 (241)
                      +...+.++.+||..|  -|.|..+..+|+ .|++|++++.|+...+.++++.+....            ......     
T Consensus        39 ~~l~~~~~~rvLd~G--CG~G~~a~~LA~-~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  115 (229)
T d2bzga1          39 TFLKGKSGLRVFFPL--CGKAVEMKWFAD-RGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLY  115 (229)
T ss_dssp             HHHTTCCSCEEEETT--CTTCTHHHHHHH-TTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEE
T ss_pred             HhcCCCCCCEEEEeC--CCCcHHHHHHHh-CCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEE
Confidence            445678999999998  455888888876 699999999999999988855543210            000000     


Q ss_pred             -hhHHHHHHHHCCCCccEEEeCCC-----c----hhHHHHHHhhccCCEEEEEee
Q 026217          108 -PDLDAALKRYFPEGINIYFENVG-----G----KMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       108 -~~~~~~i~~~~~~~~d~v~d~~g-----~----~~~~~~~~~l~~~G~~v~~g~  152 (241)
                       .++. .+.....+.+|+|+++..     .    ..+..+.++|+|+|+++....
T Consensus       116 ~~d~~-~l~~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~LkpgG~~~l~~~  169 (229)
T d2bzga1         116 CCSIF-DLPRTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKKFQYLLCVL  169 (229)
T ss_dssp             ESCGG-GGGGSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             Ecchh-hccccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCcceEEEEEc
Confidence             0110 111112237999998663     1    245788999999999876654

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=96.88  E-value=0.011  Score=39.79  Aligned_cols=101  Identities=18%  Similarity=0.162  Sum_probs=74.1

Q ss_pred             HHHHHHHHhcC-CCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHH
Q 026217           38 TAYAGFFEVCS-PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKR  116 (241)
Q Consensus        38 ta~~~l~~~~~-~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~  116 (241)
                      ..+.++.+..+ +-.|.+++|.|= |-+|.-.++-++.+|++|+++...|-+.=++. -=|. ++.      +..+.+. 
T Consensus         8 S~~d~i~r~t~~~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA~-mdGf-~v~------~~~~a~~-   77 (163)
T d1v8ba1           8 SLPDGLMRATDFLISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPICAIQAV-MEGF-NVV------TLDEIVD-   77 (163)
T ss_dssp             HHHHHHHHHHCCCCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH-TTTC-EEC------CHHHHTT-
T ss_pred             hHHHHHHHHhCceecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCchhhHHHH-hcCC-ccC------chhHccc-
Confidence            34456655555 468999999995 99999999999999999999998875433333 2232 221      3333333 


Q ss_pred             HCCCCccEEEeCCCch--hHHHHHHhhccCCEEEEEee
Q 026217          117 YFPEGINIYFENVGGK--MLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       117 ~~~~~~d~v~d~~g~~--~~~~~~~~l~~~G~~v~~g~  152 (241)
                          ..|+++-++|+.  .-...++.|+.+..++.+|-
T Consensus        78 ----~aDi~vTaTGn~~vI~~~h~~~MKdgaIl~N~GH  111 (163)
T d1v8ba1          78 ----KGDFFITCTGNVDVIKLEHLLKMKNNAVVGNIGH  111 (163)
T ss_dssp             ----TCSEEEECCSSSSSBCHHHHTTCCTTCEEEECSS
T ss_pred             ----cCcEEEEcCCCCccccHHHHHHhhCCeEEEeccc
Confidence                489999999974  35678899999999998875

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.88  E-value=0.00019  Score=52.35  Aligned_cols=75  Identities=21%  Similarity=0.221  Sum_probs=46.8

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHcCCC-eeecCCCchhHHHHHHHHCCCCccEEEe
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEPDLDAALKRYFPEGINIYFE  127 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~--~v~~~~~~~~~~~~~~~~~g~~-~~i~~~~~~~~~~~i~~~~~~~~d~v~d  127 (241)
                      .+.+|||+||+|.+|...++.+...|.  +|++++|++.+...-. .-... .+.|..+.    +.+.+.. .++|+++.
T Consensus        13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~-~~~i~~~~~D~~~~----~~~~~~~-~~~d~vi~   86 (232)
T d2bkaa1          13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-YKNVNQEVVDFEKL----DDYASAF-QGHDVGFC   86 (232)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-GGGCEEEECCGGGG----GGGGGGG-SSCSEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccc-cceeeeeeeccccc----ccccccc-cccccccc
Confidence            346899999999999999998888775  8999998654322111 11111 12233221    1122211 25999999


Q ss_pred             CCCc
Q 026217          128 NVGG  131 (241)
Q Consensus       128 ~~g~  131 (241)
                      |+|.
T Consensus        87 ~~~~   90 (232)
T d2bkaa1          87 CLGT   90 (232)
T ss_dssp             CCCC
T ss_pred             cccc
Confidence            9874

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=96.88  E-value=0.00044  Score=53.48  Aligned_cols=77  Identities=19%  Similarity=0.258  Sum_probs=49.8

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC----CCe-eecCCCchhHHHHHHHHCCCCccEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFG----FDE-AFNYKEEPDLDAALKRYFPEGINIY  125 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g----~~~-~i~~~~~~~~~~~i~~~~~~~~d~v  125 (241)
                      .+.+|||+||+|-+|..+++.+...|.+|+++++++.+...+.+...    ... ..|-++...+.+.++.   ..+|++
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~---~~~~~v   83 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIRE---FQPEIV   83 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHH---HCCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhh---chhhhh
Confidence            46899999999999999999999999999999987653322221221    111 1233333122222222   158899


Q ss_pred             EeCCC
Q 026217          126 FENVG  130 (241)
Q Consensus       126 ~d~~g  130 (241)
                      +.+++
T Consensus        84 ~~~aa   88 (356)
T d1rkxa_          84 FHMAA   88 (356)
T ss_dssp             EECCS
T ss_pred             hhhhc
Confidence            98886

>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.87  E-value=0.0067  Score=46.33  Aligned_cols=102  Identities=18%  Similarity=0.217  Sum_probs=69.2

Q ss_pred             HHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH----------cCCC----eee--cC
Q 026217           42 GFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNK----------FGFD----EAF--NY  104 (241)
Q Consensus        42 ~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~----------~g~~----~~i--~~  104 (241)
                      -+.+..+++++++|+=.|  .|.|..+.++|+..++ ++++++.++...+.+++.          +|..    .++  |.
T Consensus       142 ~~~~~~~l~~~~~vlD~G--cG~G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~gd~  219 (328)
T d1nw3a_         142 QMIDEIKMTDDDLFVDLG--SGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDF  219 (328)
T ss_dssp             HHHHHSCCCTTCEEEEET--CTTSHHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEECCT
T ss_pred             HHHHHcCCCCCCEEEEcC--CCCCHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEECcc
Confidence            344667899999999988  7889999999999987 899999998876666521          2221    122  22


Q ss_pred             CCchhHHHHHHHHCCCCccEEEeCCC---c---hhHHHHHHhhccCCEEEEEe
Q 026217          105 KEEPDLDAALKRYFPEGINIYFENVG---G---KMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       105 ~~~~~~~~~i~~~~~~~~d~v~d~~g---~---~~~~~~~~~l~~~G~~v~~g  151 (241)
                      .+. ++.+.+.+     +|+|+-..-   .   ..+..+.+.|++||++++.-
T Consensus       220 ~~~-~~~~~~~~-----advi~~~~~~f~~~~~~~l~e~~r~LKpGg~iv~~~  266 (328)
T d1nw3a_         220 LSE-EWRERIAN-----TSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSK  266 (328)
T ss_dssp             TSH-HHHHHHHH-----CSEEEECCTTTCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             ccc-ccccccCc-----ceEEEEcceecchHHHHHHHHHHHhCCCCcEEEEec
Confidence            222 44444433     677764221   1   34567888899999998753

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.81  E-value=0.0015  Score=45.80  Aligned_cols=43  Identities=14%  Similarity=0.219  Sum_probs=37.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF   96 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~   96 (241)
                      +|.|+||+|++|.+..+.+...|++|++..|++++.+.+.+++
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i   44 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEY   44 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence            5788877899999999999999999999999999877776444

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=96.77  E-value=0.0039  Score=43.91  Aligned_cols=86  Identities=19%  Similarity=0.149  Sum_probs=60.8

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      .|.+|.|+| .|.+|...+++++.+|++|++.++..+.....   .+..      .. ++.+.+++     .|+++-++.
T Consensus        42 ~gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~~~~~~---~~~~------~~-~l~~~l~~-----sDii~~~~p  105 (197)
T d1j4aa1          42 RDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRNPELEK---KGYY------VD-SLDDLYKQ-----ADVISLHVP  105 (197)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCHHHHH---TTCB------CS-CHHHHHHH-----CSEEEECSC
T ss_pred             cCCeEEEec-ccccchhHHHhHhhhcccccccCccccccccc---ceee------ec-cccccccc-----cccccccCC
Confidence            478999999 59999999999999999999998654433221   1211      11 45555554     898888775


Q ss_pred             -ch-----hHHHHHHhhccCCEEEEEee
Q 026217          131 -GK-----MLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       131 -~~-----~~~~~~~~l~~~G~~v~~g~  152 (241)
                       ++     .-...+..|+++..++.++.
T Consensus       106 lt~~T~~li~~~~l~~mk~~a~lIN~sR  133 (197)
T d1j4aa1         106 DVPANVHMINDESIAKMKQDVVIVNVSR  133 (197)
T ss_dssp             CCGGGTTCBSHHHHHHSCTTEEEEECSC
T ss_pred             ccccccccccHHHHhhhCCccEEEecCc
Confidence             21     23567788888888888754

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=96.77  E-value=0.0048  Score=40.40  Aligned_cols=72  Identities=17%  Similarity=0.153  Sum_probs=53.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeee-cCCCchhHHHHHHHHCCCCccEEEeCCCc
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAF-NYKEEPDLDAALKRYFPEGINIYFENVGG  131 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i-~~~~~~~~~~~i~~~~~~~~d~v~d~~g~  131 (241)
                      +++|.|+ |.+|+.+++.+...|..|++++.++++.+.++ ..+...++ |..++ +...+.   .-..+|.++-+++.
T Consensus         2 ~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~-~~~~~~~~gd~~~~-~~l~~a---~i~~a~~vi~~~~~   74 (134)
T d2hmva1           2 QFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA-SYATHAVIANATEE-NELLSL---GIRNFEYVIVAIGA   74 (134)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTT-TTCSEEEECCTTCT-THHHHH---TGGGCSEEEECCCS
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHH-HhCCcceeeecccc-hhhhcc---CCccccEEEEEcCc
Confidence            3678885 99999999999999999999999999999998 77654332 33333 333332   11258888888875

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.76  E-value=0.0014  Score=42.90  Aligned_cols=73  Identities=14%  Similarity=0.071  Sum_probs=51.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCchh
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKM  133 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~  133 (241)
                      +|.|+|++|-+|++..+++...+.++++......           ..        .+         ..+|+++|++..+.
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~-----------~~--------~~---------~~~DVvIDFS~p~~   53 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNG-----------VE--------EL---------DSPDVVIDFSSPEA   53 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTE-----------EE--------EC---------SCCSEEEECSCGGG
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCc-----------HH--------Hh---------ccCCEEEEecCHHH
Confidence            5899999999999999999988887765541100           00        00         14788888888777


Q ss_pred             HHHHHHhhccCCEEEEEeeec
Q 026217          134 LDAVLLNMRIQGRITLCGMIS  154 (241)
Q Consensus       134 ~~~~~~~l~~~G~~v~~g~~~  154 (241)
                      ....++.+...+.-+.+|.++
T Consensus        54 ~~~~l~~~~~~~~p~ViGTTG   74 (128)
T d1vm6a3          54 LPKTVDLCKKYRAGLVLGTTA   74 (128)
T ss_dssp             HHHHHHHHHHHTCEEEECCCS
T ss_pred             HHHHHHHHHhcCCCEEEEcCC
Confidence            777777776667667777654

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.76  E-value=0.0057  Score=42.88  Aligned_cols=40  Identities=28%  Similarity=0.238  Sum_probs=35.1

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK   93 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~   93 (241)
                      .+|.|.|| |.+|...++++...|++|+..+++++.++.++
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~   44 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSK   44 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHH
Confidence            47999996 99999999999999999999999988766554

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.76  E-value=0.0048  Score=43.03  Aligned_cols=40  Identities=13%  Similarity=0.045  Sum_probs=34.3

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK   93 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~   93 (241)
                      .+|.|.|| |.+|...+.++...|.+|+..+++++..+...
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~   44 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGL   44 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhh
Confidence            46899996 99999888888888999999999988766554

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.76  E-value=0.002  Score=50.44  Aligned_cols=32  Identities=19%  Similarity=0.095  Sum_probs=29.3

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEe
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSA   83 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~   83 (241)
                      |.+|||+||+|-+|..++..+...|.+|++++
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iD   32 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVD   32 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEe
Confidence            67899999999999999999999999999986

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=96.75  E-value=0.005  Score=47.10  Aligned_cols=73  Identities=15%  Similarity=0.157  Sum_probs=46.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeC----CHHHHHHHHHHc---CCCe-eecCCCchhHHHHHHHHCCCCccEE
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAG----SKDKVDLLKNKF---GFDE-AFNYKEEPDLDAALKRYFPEGINIY  125 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~----~~~~~~~~~~~~---g~~~-~i~~~~~~~~~~~i~~~~~~~~d~v  125 (241)
                      +|||+||+|-+|...+..+...|.+|+++++    ......... .+   +... ..|-.+...+.+.+++   .++|+|
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~l~~~~~~---~~~d~V   77 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIE-RLGGKHPTFVEGDIRNEALMTEILHD---HAIDTV   77 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHH-HHHTSCCEEEECCTTCHHHHHHHHHH---TTCSEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHH-hhcCCCCEEEEeecCCHHHHHHHHhc---cCCCEE
Confidence            5999999999999999999999999999874    222233322 22   2221 1233343133334432   269999


Q ss_pred             EeCCC
Q 026217          126 FENVG  130 (241)
Q Consensus       126 ~d~~g  130 (241)
                      |.+++
T Consensus        78 iHlAa   82 (338)
T d1udca_          78 IHFAG   82 (338)
T ss_dssp             EECCS
T ss_pred             EECCC
Confidence            99875

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.75  E-value=0.0016  Score=47.13  Aligned_cols=100  Identities=15%  Similarity=0.150  Sum_probs=67.4

Q ss_pred             HhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHcCC---Ceee--cCCCchhHHHHHHHH
Q 026217           45 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDKVDLLKNKFGF---DEAF--NYKEEPDLDAALKRY  117 (241)
Q Consensus        45 ~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~--~v~~~~~~~~~~~~~~~~~g~---~~~i--~~~~~~~~~~~i~~~  117 (241)
                      +...++||++||=.|  .+.|..+..+++..|-  +|++++.+++..+.+++....   ...+  +.+..    .... .
T Consensus        67 ~~l~i~pG~~VLDlG--aGsG~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~~~----~~~~-~  139 (227)
T d1g8aa_          67 KNFPIKPGKSVLYLG--IASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKP----EEYR-A  139 (227)
T ss_dssp             CCCCCCTTCEEEEET--TTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCG----GGGT-T
T ss_pred             cccccCCCCEEEEec--cCCCHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECCCc----cccc-c
Confidence            346799999999999  4668888899998864  899999999988888733321   1111  22221    1111 1


Q ss_pred             CCCCccEEEeCCC-c----hhHHHHHHhhccCCEEEEEe
Q 026217          118 FPEGINIYFENVG-G----KMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       118 ~~~~~d~v~d~~g-~----~~~~~~~~~l~~~G~~v~~g  151 (241)
                      ..+.+|+++.... .    ..+..+.+.|+++|+++++-
T Consensus       140 ~~~~vD~i~~d~~~~~~~~~~l~~~~~~LkpgG~lvi~~  178 (227)
T d1g8aa_         140 LVPKVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIAV  178 (227)
T ss_dssp             TCCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cccceEEEEEEccccchHHHHHHHHHHhcccCCeEEEEE
Confidence            1236888876543 1    25778888999999988753

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.75  E-value=0.01  Score=37.53  Aligned_cols=89  Identities=8%  Similarity=-0.054  Sum_probs=60.2

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH--HHHHHHHHcCCCeeec--CCCchhHHHHHHHHCCCCccEEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD--KVDLLKNKFGFDEAFN--YKEEPDLDAALKRYFPEGINIYF  126 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~--~~~~~~~~~g~~~~i~--~~~~~~~~~~i~~~~~~~~d~v~  126 (241)
                      .|.+|+|.|+ |.+|..-++.+...|++|++++....  -..++. +-+.. ...  +... ++         .++++|+
T Consensus        11 ~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~-~~~i~-~~~~~~~~~-dl---------~~~~lv~   77 (113)
T d1pjqa1          11 RDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFIPQFTVWAN-EGMLT-LVEGPFDET-LL---------DSCWLAI   77 (113)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHT-TTSCE-EEESSCCGG-GG---------TTCSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHh-cCCce-eeccCCCHH-Hh---------CCCcEEe
Confidence            4789999996 99999999999999999888874332  222222 22221 221  1111 11         2589999


Q ss_pred             eCCCchh-HHHHHHhhccCCEEEEEee
Q 026217          127 ENVGGKM-LDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       127 d~~g~~~-~~~~~~~l~~~G~~v~~g~  152 (241)
                      -+++... -......+++.|.+|.+..
T Consensus        78 ~at~d~~~n~~i~~~a~~~~ilVNv~D  104 (113)
T d1pjqa1          78 AATDDDTVNQRVSDAAESRRIFCNVVD  104 (113)
T ss_dssp             ECCSCHHHHHHHHHHHHHTTCEEEETT
T ss_pred             ecCCCHHHHHHHHHHHHHcCCEEEeCC
Confidence            9998754 4577778888999998754

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=96.72  E-value=0.027  Score=37.54  Aligned_cols=95  Identities=18%  Similarity=0.145  Sum_probs=59.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCH--HHH-HHHHHHcCCCeeecCCCc--hhHHH--------------
Q 026217           54 YVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSK--DKV-DLLKNKFGFDEAFNYKEE--PDLDA--------------  112 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~--g~~v~~~~~~~--~~~-~~~~~~~g~~~~i~~~~~--~~~~~--------------  112 (241)
                      +|.|.|++|++|..++.+.++.  .++|++.+...  +.+ +.++ +|....++-.++.  ..+..              
T Consensus         3 ~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~-~f~pk~v~i~d~~~~~~l~~~l~~~~~~~~~~~g   81 (151)
T d1q0qa2           3 QLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCL-EFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSG   81 (151)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHH-HHCCSEEEESSHHHHHHHHHHHHHTTCCCEEEES
T ss_pred             eEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHH-HHhhcccccccHHHHHHHHHHhhhhccccccccC
Confidence            6899999999999999999987  45777776432  232 3333 6776655433321  01111              


Q ss_pred             --HHHHHCC-CCccEEEeCCCc-hhHHHHHHhhccCCEEEE
Q 026217          113 --ALKRYFP-EGINIYFENVGG-KMLDAVLLNMRIQGRITL  149 (241)
Q Consensus       113 --~i~~~~~-~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~  149 (241)
                        .+.++.. ..+|+|+.+..+ ..+...+..++.+-++..
T Consensus        82 ~~~l~~~~~~~~~D~vi~AI~G~aGL~~t~~aik~gk~iaL  122 (151)
T d1q0qa2          82 QQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILL  122 (151)
T ss_dssp             HHHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHTTCEEEE
T ss_pred             hHHHHHHhcCCCCCEEEEecCcccHHHHHHHHHhcCCeEEE
Confidence              1222211 268999998865 667777777777655544

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=96.71  E-value=0.0008  Score=49.04  Aligned_cols=36  Identities=17%  Similarity=0.167  Sum_probs=32.6

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK   88 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~   88 (241)
                      .++||+||++++|++.++.+...|++|++++++++.
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~   37 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRREG   37 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc
Confidence            578999999999999999999999999999987543

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.69  E-value=0.0017  Score=47.45  Aligned_cols=96  Identities=15%  Similarity=0.105  Sum_probs=64.0

Q ss_pred             HHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC-eeecCCCchhHHHHHHHHC
Q 026217           43 FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-EAFNYKEEPDLDAALKRYF  118 (241)
Q Consensus        43 l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~~i~~~~~~~~~~~i~~~~  118 (241)
                      +.......+..+||=.|  .|.|..+..+++ .|++|++++.+++-.+.+++.+   +.. .++..+.        .++.
T Consensus        33 ~~~~~~~~~~~~iLDiG--cGtG~~~~~l~~-~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~--------~~l~  101 (251)
T d1wzna1          33 IFKEDAKREVRRVLDLA--CGTGIPTLELAE-RGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDV--------LEIA  101 (251)
T ss_dssp             HHHHTCSSCCCEEEEET--CTTCHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCG--------GGCC
T ss_pred             HHHHhcCCCCCEEEEeC--CCCCccchhhcc-cceEEEEEeeccccccccccccccccccchheehhh--------hhcc
Confidence            33445667788999999  345887777776 6889999999998888887432   221 2222211        2222


Q ss_pred             -CCCccEEEeCCCc----------hhHHHHHHhhccCCEEEE
Q 026217          119 -PEGINIYFENVGG----------KMLDAVLLNMRIQGRITL  149 (241)
Q Consensus       119 -~~~~d~v~d~~g~----------~~~~~~~~~l~~~G~~v~  149 (241)
                       ++.+|+|+...+.          ..++.+.++|+|||.++.
T Consensus       102 ~~~~fD~I~~~~~~~~~~~~~~~~~~L~~~~~~LkpgG~lii  143 (251)
T d1wzna1         102 FKNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFIT  143 (251)
T ss_dssp             CCSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             cccccchHhhhhhhhhcCChHHHHHHHHHHHHHcCCCcEEEE
Confidence             2379998875431          246778889999998875

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.67  E-value=0.0052  Score=43.83  Aligned_cols=94  Identities=16%  Similarity=0.102  Sum_probs=62.0

Q ss_pred             CCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC-eeecCCCchhHHHHHHHHCCCCcc
Q 026217           48 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-EAFNYKEEPDLDAALKRYFPEGIN  123 (241)
Q Consensus        48 ~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~~i~~~~~~~~~~~i~~~~~~~~d  123 (241)
                      -++++++||-+|  .|.|..+..+++ .|.+|++++.+++..+.+++.+   +.. ..+..+.. ++     ...++.+|
T Consensus        34 ~l~~~~~ILDiG--cG~G~~~~~la~-~~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~-~l-----~~~~~~fD  104 (226)
T d1ve3a1          34 YMKKRGKVLDLA--CGVGGFSFLLED-YGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDAR-KL-----SFEDKTFD  104 (226)
T ss_dssp             SCCSCCEEEEET--CTTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTT-SC-----CSCTTCEE
T ss_pred             hcCCCCEEEEEC--CCcchhhhhHhh-hhcccccccccccchhhhhhhhccccccccccccccc-cc-----cccCcCce
Confidence            367889999999  455778888876 5889999999999888877432   221 11211111 11     01123799


Q ss_pred             EEEeCCC-----c----hhHHHHHHhhccCCEEEEE
Q 026217          124 IYFENVG-----G----KMLDAVLLNMRIQGRITLC  150 (241)
Q Consensus       124 ~v~d~~g-----~----~~~~~~~~~l~~~G~~v~~  150 (241)
                      +|+....     .    ..++.+.++|+|||+++..
T Consensus       105 ~I~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~lii~  140 (226)
T d1ve3a1         105 YVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMY  140 (226)
T ss_dssp             EEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             EEEEecchhhCChhHHHHHHHHHHHHcCcCcEEEEE
Confidence            8875433     1    2467788899999998764

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=96.66  E-value=0.0031  Score=46.64  Aligned_cols=32  Identities=16%  Similarity=0.236  Sum_probs=29.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   85 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~   85 (241)
                      +|||+||+|-+|...+..++..|.+|++++++
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~   34 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQ   34 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeech
Confidence            58999999999999999999999999999865

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.66  E-value=0.0078  Score=41.10  Aligned_cols=88  Identities=11%  Similarity=0.097  Sum_probs=56.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHcCC-CeeecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDKVDLLKNKFGF-DEAFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~--~v~~~~~~~~~~~~~~~~~g~-~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      +|+|.| .|.+|...+..++..|.  +|++.+++++..+.++ +.+. +........         ......|+++-|+.
T Consensus         3 ~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~-~~~~~~~~~~~~~~---------~~~~~~dlIila~p   71 (171)
T d2g5ca2           3 NVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV-DLGIIDEGTTSIAK---------VEDFSPDFVMLSSP   71 (171)
T ss_dssp             EEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH-HTTSCSEEESCGGG---------GGGTCCSEEEECSC
T ss_pred             EEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHH-Hhhcchhhhhhhhh---------hhccccccccccCC
Confidence            589999 49999999988888875  8999999999999999 7765 332221110         00014677777776


Q ss_pred             ch----hHHHHHHhhccCCEEEEEee
Q 026217          131 GK----MLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       131 ~~----~~~~~~~~l~~~G~~v~~g~  152 (241)
                      .+    .+....+.+.++..++.++.
T Consensus        72 ~~~~~~vl~~l~~~~~~~~ii~d~~s   97 (171)
T d2g5ca2          72 VRTFREIAKKLSYILSEDATVTDQGS   97 (171)
T ss_dssp             HHHHHHHHHHHHHHSCTTCEEEECCS
T ss_pred             chhhhhhhhhhhcccccccccccccc
Confidence            43    23334444555555554443

>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: COMT domain-containing protein 1, COMTD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.58  E-value=0.0056  Score=43.88  Aligned_cols=104  Identities=10%  Similarity=0.025  Sum_probs=70.2

Q ss_pred             HhcCCCCCcEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHH---cCCCeeecCCCchhHHHHHHHH--
Q 026217           45 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRY--  117 (241)
Q Consensus        45 ~~~~~~~~~~vlI~ga~g~~G~~avqla~~~--g~~v~~~~~~~~~~~~~~~~---~g~~~~i~~~~~~~~~~~i~~~--  117 (241)
                      .+.......+||-+|  ++.|..++.+|+.+  +.+|+.+..+++..+.+++.   .|....+..... +..+.+.+.  
T Consensus        53 ~L~~~~~~k~vLEiG--t~~GyStl~~a~al~~~g~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~~G-da~e~l~~~~~  129 (219)
T d2avda1          53 NLARLIQAKKALDLG--TFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLK-PALETLDELLA  129 (219)
T ss_dssp             HHHHHTTCCEEEEEC--CTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEES-CHHHHHHHHHH
T ss_pred             HHHHccCCCeEEEEe--chhhHHHHHHHHhCCCCceEEEEeechhHHHHHHHHHHhcCccceEEEEEe-ehhhcchhhhh
Confidence            345556778999999  88899999999887  45999999998877776633   354332322222 333333322  


Q ss_pred             --CCCCccEEEeCCC-c---hhHHHHHHhhccCCEEEEEe
Q 026217          118 --FPEGINIYFENVG-G---KMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       118 --~~~~~d~v~d~~g-~---~~~~~~~~~l~~~G~~v~~g  151 (241)
                        ..+.+|+||--.. .   ..+..+++.|++||.++.-.
T Consensus       130 ~~~~~~fD~ifiD~dk~~y~~~~~~~~~lL~~GGvii~Dn  169 (219)
T d2avda1         130 AGEAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLR  169 (219)
T ss_dssp             TTCTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             hcccCCccEEEEeCCHHHHHHHHHHHHHHhcCCcEEEEeC
Confidence              2347998875443 2   35778999999999887743

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.56  E-value=0.014  Score=39.42  Aligned_cols=86  Identities=12%  Similarity=0.071  Sum_probs=59.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCc-h
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG-K  132 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~  132 (241)
                      +|.|.| .|.+|...++-+...|.+|++.++++++.+.++ +.+.... +     +..+.+++     +|+++-|+.. +
T Consensus         2 kIgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~-~~~~~~~-~-----~~~e~~~~-----~d~ii~~v~~~~   68 (161)
T d1vpda2           2 KVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVI-AAGAETA-S-----TAKAIAEQ-----CDVIITMLPNSP   68 (161)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCEEC-S-----SHHHHHHH-----CSEEEECCSSHH
T ss_pred             EEEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHH-Hhhhhhc-c-----cHHHHHhC-----CCeEEEEcCCHH
Confidence            478899 599999988888889999999999999999998 7776322 1     33334443     8888888864 3


Q ss_pred             hHHHH-------HHhhccCCEEEEEee
Q 026217          133 MLDAV-------LLNMRIQGRITLCGM  152 (241)
Q Consensus       133 ~~~~~-------~~~l~~~G~~v~~g~  152 (241)
                      .....       ...+.++..++.++.
T Consensus        69 ~v~~v~~~~~~~~~~~~~g~iiid~sT   95 (161)
T d1vpda2          69 HVKEVALGENGIIEGAKPGTVLIDMSS   95 (161)
T ss_dssp             HHHHHHHSTTCHHHHCCTTCEEEECSC
T ss_pred             HHHHHHhCCcchhhccCCCCEEEECCC
Confidence            33333       333445545555443

>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA methyltransferase RlmA
domain: rRNA methyltransferase RlmA
species: Escherichia coli [TaxId: 562]

Probab=96.56  E-value=0.0084  Score=44.33  Aligned_cols=96  Identities=9%  Similarity=0.029  Sum_probs=67.8

Q ss_pred             CCCCcEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEe
Q 026217           49 PKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFE  127 (241)
Q Consensus        49 ~~~~~~vlI~ga~g~~G~~avqla~~~-g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d  127 (241)
                      ..++.+||=.|  .|.|..+..+++.. +.++++++.+++..+.+++.......+..+.. ++     ...++.+|+|+.
T Consensus        82 ~~~~~~iLDiG--cG~G~~~~~l~~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~d~~-~l-----~~~~~sfD~v~~  153 (268)
T d1p91a_          82 DDKATAVLDIG--CGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSH-RL-----PFSDTSMDAIIR  153 (268)
T ss_dssp             CTTCCEEEEET--CTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTT-SC-----SBCTTCEEEEEE
T ss_pred             CCCCCEEEEeC--CCCcHHHHHHHHHCCCCEEEEecchHhhhhhhhcccccccceeeehh-hc-----cCCCCCEEEEee
Confidence            46778898888  56677777888776 67999999999999998844332222111111 11     112347999997


Q ss_pred             CCCchhHHHHHHhhccCCEEEEEee
Q 026217          128 NVGGKMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       128 ~~g~~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      .-.-..+..+.++|+|+|.++....
T Consensus       154 ~~~~~~~~e~~rvLkpgG~l~~~~p  178 (268)
T d1p91a_         154 IYAPCKAEELARVVKPGGWVITATP  178 (268)
T ss_dssp             ESCCCCHHHHHHHEEEEEEEEEEEE
T ss_pred             cCCHHHHHHHHHHhCCCcEEEEEee
Confidence            7666778899999999999998754

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.55  E-value=0.0016  Score=45.91  Aligned_cols=101  Identities=13%  Similarity=0.104  Sum_probs=64.3

Q ss_pred             HHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCCe-eecCCCchhHHHHHHHHC
Q 026217           43 FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE-AFNYKEEPDLDAALKRYF  118 (241)
Q Consensus        43 l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~~-~i~~~~~~~~~~~i~~~~  118 (241)
                      +.+.....++++||=.|  .|.|..++.+++ .+.+|++++.++...+.+++.+   +... -+..... ++.+   ...
T Consensus        44 Li~~l~~~~~~~VLDiG--cG~G~~~~~la~-~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~-d~~~---~~~  116 (194)
T d1dusa_          44 LVENVVVDKDDDILDLG--CGYGVIGIALAD-EVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHS-DLYE---NVK  116 (194)
T ss_dssp             HHHHCCCCTTCEEEEET--CTTSHHHHHHGG-GSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEEC-STTT---TCT
T ss_pred             HHHhCCcCCCCeEEEEe--ecCChhHHHHHh-hccccceeeeccccchhHHHHHHHhCCccceEEEEEc-chhh---hhc
Confidence            44566788999999998  566777776665 5679999999999888887422   3211 0111011 1111   122


Q ss_pred             CCCccEEEeCC----Cc----hhHHHHHHhhccCCEEEEE
Q 026217          119 PEGINIYFENV----GG----KMLDAVLLNMRIQGRITLC  150 (241)
Q Consensus       119 ~~~~d~v~d~~----g~----~~~~~~~~~l~~~G~~v~~  150 (241)
                      ++.+|+|+-..    +.    ..+..+.+.|+++|+++.+
T Consensus       117 ~~~fD~Ii~~~p~~~~~~~~~~~l~~~~~~LkpgG~l~i~  156 (194)
T d1dusa_         117 DRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVV  156 (194)
T ss_dssp             TSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cCCceEEEEcccEEecchhhhhHHHHHHHhcCcCcEEEEE
Confidence            34799998632    22    2366778889999998664

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.51  E-value=0.012  Score=44.78  Aligned_cols=39  Identities=5%  Similarity=-0.061  Sum_probs=32.0

Q ss_pred             CcEEEEEcC--CchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Q 026217           52 GEYVFVSAA--SGAVGQLVGQFAKLVGCYVVGSAGSKDKVD   90 (241)
Q Consensus        52 ~~~vlI~ga--~g~~G~~avqla~~~g~~v~~~~~~~~~~~   90 (241)
                      ++..||+||  +.|+|++.++.+...|++|+.+.++.....
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~   42 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNI   42 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHH
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhh
Confidence            567899994  469999999999999999999987665433

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=96.50  E-value=0.025  Score=38.03  Aligned_cols=91  Identities=14%  Similarity=0.145  Sum_probs=54.1

Q ss_pred             cEEEEEcCCchHHH-HHHHHHHHcC-CEEEEEeCC-H--HHHHHHHHHcCCCeeecCCCchhHHHHHHHHCC-CCccEEE
Q 026217           53 EYVFVSAASGAVGQ-LVGQFAKLVG-CYVVGSAGS-K--DKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFP-EGINIYF  126 (241)
Q Consensus        53 ~~vlI~ga~g~~G~-~avqla~~~g-~~v~~~~~~-~--~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~-~~~d~v~  126 (241)
                      =++.|.| +|.+|. ..+++.+... .+++++++. +  ....+++ ++|.....      ...+.+.+..+ .++|+||
T Consensus         5 irvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~-~~~i~~~~------~~~d~l~~~~~~~~iDiVf   76 (157)
T d1nvmb1           5 LKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQ-RMGVTTTY------AGVEGLIKLPEFADIDFVF   76 (157)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHH-HTTCCEES------SHHHHHHHSGGGGGEEEEE
T ss_pred             cEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhh-hcCCcccc------cceeeeeecccccccCEEE
Confidence            4789999 699997 5677877764 478887643 2  3456666 78765321      12223332222 2699999


Q ss_pred             eCCCc-hhHHHH--HHhhccCCEEEEEe
Q 026217          127 ENVGG-KMLDAV--LLNMRIQGRITLCG  151 (241)
Q Consensus       127 d~~g~-~~~~~~--~~~l~~~G~~v~~g  151 (241)
                      .++.. .+....  .+.++.|-.++..+
T Consensus        77 ~ATpag~h~~~~~~~~aa~~G~~VID~s  104 (157)
T d1nvmb1          77 DATSASAHVQNEALLRQAKPGIRLIDLT  104 (157)
T ss_dssp             ECSCHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EcCCchhHHHhHHHHHHHHcCCEEEEcc
Confidence            99885 444433  33344444555443

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.50  E-value=0.0027  Score=48.43  Aligned_cols=33  Identities=18%  Similarity=0.264  Sum_probs=30.5

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   85 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~   85 (241)
                      .++||+||+|-+|...+..+...|.+|+++++.
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~   34 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRR   34 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECC
Confidence            479999999999999999999999999999974

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=96.48  E-value=0.0014  Score=48.24  Aligned_cols=33  Identities=15%  Similarity=0.279  Sum_probs=30.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK   86 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~   86 (241)
                      .|+|+||++++|++.++.+...|++|+++++++
T Consensus         3 VvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~   35 (257)
T d1fjha_           3 IIVISGCATGIGAATRKVLEAAGHQIVGIDIRD   35 (257)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCh
Confidence            589999999999999999999999999999764

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=96.41  E-value=0.0077  Score=44.96  Aligned_cols=36  Identities=11%  Similarity=0.123  Sum_probs=31.8

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK   86 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~   86 (241)
                      +..+|||+||+|-+|...+..+...|.+|++++|++
T Consensus         2 ~k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~   37 (312)
T d1qyda_           2 KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPE   37 (312)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCC
Confidence            345699999999999999999989999999999764

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.41  E-value=0.0035  Score=44.66  Aligned_cols=101  Identities=12%  Similarity=0.126  Sum_probs=63.6

Q ss_pred             cCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHc---CCCeeecCCCchhHHHHHHHHCCCCc
Q 026217           47 CSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEPDLDAALKRYFPEGI  122 (241)
Q Consensus        47 ~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~---g~~~~i~~~~~~~~~~~i~~~~~~~~  122 (241)
                      ..++||++||=.|+  |.|..+..++...+- +|++++.+++..+.+++..   +....+..+.. +. .... .....+
T Consensus        52 l~lkpg~~VLDlGc--G~G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~-~~-~~~~-~~~~~v  126 (209)
T d1nt2a_          52 LKLRGDERVLYLGA--ASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDAS-KP-WKYS-GIVEKV  126 (209)
T ss_dssp             CCCCSSCEEEEETC--TTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTT-CG-GGTT-TTCCCE
T ss_pred             CCCCCCCEEEEeCC--cCCHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeecc-Cc-cccc-cccceE
Confidence            57899999999994  455677777877754 9999999998877776332   22112111111 10 0001 111257


Q ss_pred             cEEEeCCC-c----hhHHHHHHhhccCCEEEEEee
Q 026217          123 NIYFENVG-G----KMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       123 d~v~d~~g-~----~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      |+++.... .    ..+..+.+.|+++|+++..-.
T Consensus       127 d~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~  161 (209)
T d1nt2a_         127 DLIYQDIAQKNQIEILKANAEFFLKEKGEVVIMVK  161 (209)
T ss_dssp             EEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             EEEEecccChhhHHHHHHHHHHHhccCCeEEEEEE
Confidence            88776443 1    256778889999999987643

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=96.39  E-value=0.0035  Score=48.45  Aligned_cols=34  Identities=18%  Similarity=0.296  Sum_probs=29.6

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK   86 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~   86 (241)
                      ..+||+||+|-+|..++..+...|.+|+++++..
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~   35 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRA   35 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC--
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCC
Confidence            4689999999999999999999999999999754

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.38  E-value=0.011  Score=41.66  Aligned_cols=79  Identities=18%  Similarity=0.262  Sum_probs=56.5

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCC
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV  129 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~  129 (241)
                      -.|.+|+|.| .|.+|..+++.+...|++|++.+.++++.+... .+|...+ +..   +       ...-.+|+.+=|.
T Consensus        25 L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~-~~g~~~~-~~~---~-------~~~~~~DI~iPcA   91 (201)
T d1c1da1          25 LDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHAV-ALGHTAV-ALE---D-------VLSTPCDVFAPCA   91 (201)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCEEC-CGG---G-------GGGCCCSEEEECS
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHHH-hhccccc-Ccc---c-------cccccceeeeccc
Confidence            3678999999 599999999999999999999999888888888 7776432 211   1       1112588888666


Q ss_pred             Cc-hhHHHHHHhh
Q 026217          130 GG-KMLDAVLLNM  141 (241)
Q Consensus       130 g~-~~~~~~~~~l  141 (241)
                      .+ ..-....+.+
T Consensus        92 ~~~~I~~~~a~~i  104 (201)
T d1c1da1          92 MGGVITTEVARTL  104 (201)
T ss_dssp             CSCCBCHHHHHHC
T ss_pred             ccccccHHHHhhh
Confidence            53 3233344444

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=96.38  E-value=0.071  Score=36.53  Aligned_cols=138  Identities=12%  Similarity=0.036  Sum_probs=77.3

Q ss_pred             EEEEEcCCchHHHH-HHHHHHHc-C-CEEEEEe-CCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCC
Q 026217           54 YVFVSAASGAVGQL-VGQFAKLV-G-CYVVGSA-GSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV  129 (241)
Q Consensus        54 ~vlI~ga~g~~G~~-avqla~~~-g-~~v~~~~-~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~  129 (241)
                      +|.|.| +|.+|.- .+...+.. + .++++++ +++++.+.+.+.++...+++     ++.+.+.+   ..+|.|+-|+
T Consensus         5 rigiIG-~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~~-----~~~ell~~---~~id~v~I~t   75 (181)
T d1zh8a1           5 RLGIVG-CGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFD-----SYEELLES---GLVDAVDLTL   75 (181)
T ss_dssp             EEEEEC-CSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEES-----CHHHHHHS---SCCSEEEECC
T ss_pred             EEEEEc-CCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccccccceee-----eeeccccc---cccceeeccc
Confidence            588999 4999974 46666655 3 4777654 55666666655787665542     44444432   3699999988


Q ss_pred             Cc-hhHHHHHHhhccCCEEEEEeeecccCCCCCCCc-cChHHHhh-cceEE-EEeecccccchhHHHHHHHHHHHHcCCc
Q 026217          130 GG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGV-HNLTCLIS-KRIRM-EGFLVPDYFHLYPKFLEMMIPRIKEGKI  205 (241)
Q Consensus       130 g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~  205 (241)
                      .. .+...+..++.. |+-+.+..+...    .... ........ ++..+ .++..  ....+...+..+.+++.+|.+
T Consensus        76 p~~~h~~~~~~al~~-gk~V~~EKPl~~----~~~e~~~l~~~~~~~~~~~~v~~~~--R~~~~~~~~~~~~~~i~~G~i  148 (181)
T d1zh8a1          76 PVELNLPFIEKALRK-GVHVICEKPIST----DVETGKKVVELSEKSEKTVYIAENF--RENSYQKEFEDFYQVVAEGKP  148 (181)
T ss_dssp             CGGGHHHHHHHHHHT-TCEEEEESSSSS----SHHHHHHHHHHHHHCSSCEEEECGG--GCCHHHHHHHHHHHHHHSCCC
T ss_pred             ccccccccccccccc-chhhhcCCCCcC----CHHHHHHHHHHHHHhCCeEEEEeec--cccccCHHHHHHHHHHHCCCC
Confidence            86 566667766665 455555442211    1000 00112222 22222 22222  122345677888889998876


Q ss_pred             ee
Q 026217          206 VY  207 (241)
Q Consensus       206 ~~  207 (241)
                      -.
T Consensus       149 g~  150 (181)
T d1zh8a1         149 ND  150 (181)
T ss_dssp             CS
T ss_pred             cc
Confidence            43

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.37  E-value=0.0015  Score=40.07  Aligned_cols=36  Identities=19%  Similarity=0.111  Sum_probs=31.7

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD   87 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~   87 (241)
                      .|.+|+|+|. |.+|+++++++...|++|++.+.+++
T Consensus         4 ~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1           4 QGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             CCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            4678999996 99999999999999999999997543

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.35  E-value=0.0072  Score=46.04  Aligned_cols=101  Identities=16%  Similarity=0.129  Sum_probs=64.1

Q ss_pred             CCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH---cCCCeeecCCCchhHHHHHHHH--CCCC
Q 026217           48 SPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRY--FPEG  121 (241)
Q Consensus        48 ~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~---~g~~~~i~~~~~~~~~~~i~~~--~~~~  121 (241)
                      .+++|++||=.+  +++|..++.+++. |+ +|+.++.+++..+.+++.   .|...-+..... +..+.+..+  .++.
T Consensus       142 ~~~~g~~VLDl~--~g~G~~si~~a~~-ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~-d~~~~~~~~~~~~~~  217 (324)
T d2as0a2         142 WVQPGDRVLDVF--TYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVG-SAFEEMEKLQKKGEK  217 (324)
T ss_dssp             GCCTTCEEEETT--CTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEES-CHHHHHHHHHHTTCC
T ss_pred             hcCCCCeeeccc--Ccccchhhhhhhc-CCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeec-hhhhhhHHHHhccCC
Confidence            468899998887  4555556665554 66 899999999988888743   344321122122 444444433  2338


Q ss_pred             ccEEEe-CC--C-c------------hhHHHHHHhhccCCEEEEEee
Q 026217          122 INIYFE-NV--G-G------------KMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       122 ~d~v~d-~~--g-~------------~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      ||+|+- .-  + +            +.+..++++|++||.++.+..
T Consensus       218 fD~Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pGG~lv~~s~  264 (324)
T d2as0a2         218 FDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSC  264 (324)
T ss_dssp             EEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEEC
T ss_pred             CCchhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEeC
Confidence            998874 22  1 1            135667789999999998765

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.32  E-value=0.0024  Score=48.02  Aligned_cols=98  Identities=11%  Similarity=-0.017  Sum_probs=62.6

Q ss_pred             cCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC-----eeecCCCchhHHHHHHHHC
Q 026217           47 CSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-----EAFNYKEEPDLDAALKRYF  118 (241)
Q Consensus        47 ~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~-----~~i~~~~~~~~~~~i~~~~  118 (241)
                      .+.+++.+||=.|  .|.|..++.+++. |++|++++.|++-++.+++..   +..     ..+..-   ++...-....
T Consensus        52 l~~~~~~~vLD~G--cG~G~~~~~la~~-g~~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~  125 (292)
T d1xvaa_          52 LRQHGCHRVLDVA--CGTGVDSIMLVEE-GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEA---NWLTLDKDVP  125 (292)
T ss_dssp             HHHTTCCEEEESS--CTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEEC---CGGGHHHHSC
T ss_pred             hhhcCCCEEEEec--CCCcHHHHHHHHc-CCeeeeccCchHHHHHHHHHHHhcccccccceeeeeec---cccccccccC
Confidence            3445678999988  6778888888875 899999999999888776322   111     011110   1111112222


Q ss_pred             C-CCccEEEeCCCc---------------hhHHHHHHhhccCCEEEEE
Q 026217          119 P-EGINIYFENVGG---------------KMLDAVLLNMRIQGRITLC  150 (241)
Q Consensus       119 ~-~~~d~v~d~~g~---------------~~~~~~~~~l~~~G~~v~~  150 (241)
                      . +.+|.|+.....               ..++.+.+.|+|||.++.-
T Consensus       126 ~~~~fd~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~  173 (292)
T d1xvaa_         126 AGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVID  173 (292)
T ss_dssp             CTTCEEEEEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred             CCCCceEEEEecCchhhcCCcccChHHHHHHHHHHHHHcCcCcEEEEe
Confidence            2 379999864321               1578899999999998763

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.31  E-value=0.0049  Score=43.71  Aligned_cols=68  Identities=16%  Similarity=0.119  Sum_probs=43.9

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~--~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      .+|||+||+|-+|...++.+...|.  +|++..+++.         ....-+..... ++.+ +.+...+.+|.|++|+|
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~---------~~~~~~~~~~~-d~~~-~~~~~~~~~d~vi~~~g   71 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKAL---------AEHPRLDNPVG-PLAE-LLPQLDGSIDTAFCCLG   71 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCC---------CCCTTEECCBS-CHHH-HGGGCCSCCSEEEECCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCch---------hhccccccccc-chhh-hhhccccchheeeeeee
Confidence            5899999999999999998888876  7777775421         11111111111 3333 33333347999999987


Q ss_pred             c
Q 026217          131 G  131 (241)
Q Consensus       131 ~  131 (241)
                      .
T Consensus        72 ~   72 (212)
T d2a35a1          72 T   72 (212)
T ss_dssp             C
T ss_pred             e
Confidence            3

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.31  E-value=0.0059  Score=44.12  Aligned_cols=103  Identities=11%  Similarity=0.056  Sum_probs=64.2

Q ss_pred             HhcCCCCCcEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHcCC---CeeecCCCchhHHHHHHHHCCC
Q 026217           45 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKFGF---DEAFNYKEEPDLDAALKRYFPE  120 (241)
Q Consensus        45 ~~~~~~~~~~vlI~ga~g~~G~~avqla~~~-g~~v~~~~~~~~~~~~~~~~~g~---~~~i~~~~~~~~~~~i~~~~~~  120 (241)
                      +...++||++||=.|+  +.|..+..+++.. +.+|++++.++.-.+.+++....   ...+..... .. ...... ..
T Consensus        68 ~~l~ikpG~~VLDlGc--GsG~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~-~~-~~~~~~-~~  142 (230)
T d1g8sa_          68 KVMPIKRDSKILYLGA--SAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDAN-KP-QEYANI-VE  142 (230)
T ss_dssp             CCCCCCTTCEEEEESC--CSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTT-CG-GGGTTT-CC
T ss_pred             HhCCCCCCCEEEEeCE--EcCHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeec-cC-cccccc-cc
Confidence            4467899999999994  5567777778765 34999999999988888732211   112211111 11 111111 12


Q ss_pred             CccEEEeCCCc-----hhHHHHHHhhccCCEEEEEee
Q 026217          121 GINIYFENVGG-----KMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       121 ~~d~v~d~~g~-----~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      .+|+++.....     ..+..+.+.|+++|.++..-.
T Consensus       143 ~v~~i~~~~~~~~~~~~~l~~~~r~LKpgG~~~i~~k  179 (230)
T d1g8sa_         143 KVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIAIK  179 (230)
T ss_dssp             CEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             eeEEeeccccchHHHHHHHHHHHHhcccCceEEEEee
Confidence            46667665541     246778889999999887643

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.29  E-value=0.013  Score=40.62  Aligned_cols=87  Identities=23%  Similarity=0.221  Sum_probs=62.2

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      .+.++.|.|. |.+|+..+++++.+|.+|++.++..+.....  ..+.. .     . ++.+.+++     .|+|.-++.
T Consensus        43 ~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~--~~~~~-~-----~-~l~ell~~-----sDiv~~~~P  107 (184)
T d1ygya1          43 FGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSPARAA--QLGIE-L-----L-SLDDLLAR-----ADFISVHLP  107 (184)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCHHHHH--HHTCE-E-----C-CHHHHHHH-----CSEEEECCC
T ss_pred             cceeeeeccc-cchhHHHHHHhhhccceEEeecCCCChhHHh--hcCce-e-----c-cHHHHHhh-----CCEEEEcCC
Confidence            5779999995 9999999999999999999999765443333  33332 1     1 45555554     898887765


Q ss_pred             -ch-----hHHHHHHhhccCCEEEEEee
Q 026217          131 -GK-----MLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       131 -~~-----~~~~~~~~l~~~G~~v~~g~  152 (241)
                       ++     .-...+..|+++..++.++.
T Consensus       108 lt~~T~~lin~~~l~~mk~~a~lIN~sR  135 (184)
T d1ygya1         108 KTPETAGLIDKEALAKTKPGVIIVNAAR  135 (184)
T ss_dssp             CSTTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred             CCchhhhhhhHHHHhhhCCCceEEEecc
Confidence             22     23577788899888888765

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.21  E-value=0.02  Score=43.65  Aligned_cols=75  Identities=19%  Similarity=0.169  Sum_probs=45.9

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH----HHHHHHHH--HcCCC-eeecCCCchhHHHHHHHHCCCCccEE
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK----DKVDLLKN--KFGFD-EAFNYKEEPDLDAALKRYFPEGINIY  125 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~----~~~~~~~~--~~g~~-~~i~~~~~~~~~~~i~~~~~~~~d~v  125 (241)
                      ..|||+||+|-+|...+..+...|.+|+++++..    +.......  .-+.. ...|-++...+...+..   .++|+|
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~---~~~d~V   78 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKE---YKIDSV   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHH---SCCCEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhc---cCCCEE
Confidence            4699999999999999999999999999986321    12121210  11222 12233443123333322   269999


Q ss_pred             EeCCC
Q 026217          126 FENVG  130 (241)
Q Consensus       126 ~d~~g  130 (241)
                      +.+++
T Consensus        79 ihlAa   83 (347)
T d1z45a2          79 IHFAG   83 (347)
T ss_dssp             EECCS
T ss_pred             EEccc
Confidence            99886

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=96.19  E-value=0.017  Score=41.45  Aligned_cols=70  Identities=19%  Similarity=0.134  Sum_probs=53.1

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCC
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV  129 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~  129 (241)
                      -.|.+|+|.| -|.+|..+++++...|++|++++.++.+.+.+.+..|...+ +. +  .       ...-.+|+.+=|+
T Consensus        37 l~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g~~~~-~~-~--~-------~~~~~cDIl~PcA  104 (230)
T d1leha1          37 LEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAV-AP-N--A-------IYGVTCDIFAPCA  104 (230)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEEC-CG-G--G-------TTTCCCSEEEECS
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcCCccc-CC-c--c-------cccccccEecccc
Confidence            4688999999 59999999999999999999999998888877756776432 21 1  1       1122688887776


Q ss_pred             Cc
Q 026217          130 GG  131 (241)
Q Consensus       130 g~  131 (241)
                      .+
T Consensus       105 ~~  106 (230)
T d1leha1         105 LG  106 (230)
T ss_dssp             CS
T ss_pred             cc
Confidence            53

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=96.18  E-value=0.016  Score=40.46  Aligned_cols=89  Identities=10%  Similarity=0.035  Sum_probs=61.4

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      .|.++.|+|. |.+|...+++++.+|.+|++.++......... ..+...   + +  ++.+.+..     .|+|..++.
T Consensus        46 ~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~-~~~~~~---~-~--~l~~ll~~-----sD~v~l~~p  112 (191)
T d1gdha1          46 DNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRASSSDEA-SYQATF---H-D--SLDSLLSV-----SQFFSLNAP  112 (191)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCCHHHHH-HHTCEE---C-S--SHHHHHHH-----CSEEEECCC
T ss_pred             cccceEEeec-ccchHHHHHHHHhhccccccccccccccchhh-cccccc---c-C--CHHHHHhh-----CCeEEecCC
Confidence            3789999995 99999999999999999999986544333322 222211   1 1  45555554     888887664


Q ss_pred             -c-h----hHHHHHHhhccCCEEEEEee
Q 026217          131 -G-K----MLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       131 -~-~----~~~~~~~~l~~~G~~v~~g~  152 (241)
                       + +    .-...+..|+++..+|.++.
T Consensus       113 lt~~T~~li~~~~l~~mk~~a~lIN~sR  140 (191)
T d1gdha1         113 STPETRYFFNKATIKSLPQGAIVVNTAR  140 (191)
T ss_dssp             CCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             CCchHhheecHHHhhCcCCccEEEecCC
Confidence             2 1    23567778888888888764

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.15  E-value=0.0014  Score=49.80  Aligned_cols=32  Identities=16%  Similarity=0.223  Sum_probs=29.3

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG   84 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~   84 (241)
                      .+|||+||+|-+|...+..+...|.+|+++++
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~   33 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDN   33 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeC
Confidence            47999999999999999999889999999875

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=96.15  E-value=0.011  Score=41.39  Aligned_cols=88  Identities=20%  Similarity=0.191  Sum_probs=60.7

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      .|.+|.|+|. |.+|...+++++.+|++|++.++..+. +... ..+....     . ++.+-++.     .|+|.-++.
T Consensus        48 ~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~-~~~~-~~~~~~~-----~-~l~~ll~~-----sD~i~~~~p  113 (193)
T d1mx3a1          48 RGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLSD-GVER-ALGLQRV-----S-TLQDLLFH-----SDCVTLHCG  113 (193)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCT-THHH-HHTCEEC-----S-SHHHHHHH-----CSEEEECCC
T ss_pred             eCceEEEecc-ccccccceeeeeccccceeeccCcccc-cchh-hhccccc-----c-chhhcccc-----CCEEEEeec
Confidence            5789999995 999999999999999999999865432 2222 3343221     1 45555554     788877665


Q ss_pred             -c-h----hHHHHHHhhccCCEEEEEee
Q 026217          131 -G-K----MLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       131 -~-~----~~~~~~~~l~~~G~~v~~g~  152 (241)
                       + +    .-...+..|+++..++.++.
T Consensus       114 lt~~T~~li~~~~l~~mk~~a~lIN~sR  141 (193)
T d1mx3a1         114 LNEHNHHLINDFTVKQMRQGAFLVNTAR  141 (193)
T ss_dssp             CCTTCTTSBSHHHHTTSCTTEEEEECSC
T ss_pred             ccccchhhhhHHHHhccCCCCeEEecCC
Confidence             2 1    23466778888888888754

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=96.13  E-value=0.00046  Score=47.25  Aligned_cols=92  Identities=17%  Similarity=0.165  Sum_probs=58.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHcC----CCe--eecCCCchhHHHHHHHHCCCCccEEE
Q 026217           54 YVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKFG----FDE--AFNYKEEPDLDAALKRYFPEGINIYF  126 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~-g~~v~~~~~~~~~~~~~~~~~g----~~~--~i~~~~~~~~~~~i~~~~~~~~d~v~  126 (241)
                      +|+|.|++|-+|++.++++... ++++++...++.....-+ .+|    ...  +....   ++. .+    ...+|+++
T Consensus         6 kI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~-d~~~~~~~~~~~~~~~~---~~~-~~----~~~~DViI   76 (162)
T d1diha1           6 RVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGS-DAGELAGAGKTGVTVQS---SLD-AV----KDDFDVFI   76 (162)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSC-CTTCSSSSSCCSCCEES---CST-TT----TTSCSEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccc-hhhhhhccccCCceeec---cHH-HH----hcccceEE
Confidence            6899999999999999988876 677766654332211111 111    100  00000   110 01    12689999


Q ss_pred             eCCCchhHHHHHHhhccCCEEEEEeeec
Q 026217          127 ENVGGKMLDAVLLNMRIQGRITLCGMIS  154 (241)
Q Consensus       127 d~~g~~~~~~~~~~l~~~G~~v~~g~~~  154 (241)
                      |++..+.....++.+...|.-+.+|.++
T Consensus        77 DFs~p~~~~~~~~~a~~~~~~~ViGTTG  104 (162)
T d1diha1          77 DFTRPEGTLNHLAFCRQHGKGMVIGTTG  104 (162)
T ss_dssp             ECSCHHHHHHHHHHHHHTTCEEEECCCC
T ss_pred             EeccHHHHHHHHHHHHhccceeEEecCC
Confidence            9999888888888888888888888765

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=96.09  E-value=0.0046  Score=39.19  Aligned_cols=38  Identities=18%  Similarity=0.260  Sum_probs=32.3

Q ss_pred             CCCC-cEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 026217           49 PKQG-EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD   87 (241)
Q Consensus        49 ~~~~-~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~   87 (241)
                      +.|+ .+|.|.|+ |.+|.+.++-|+.+|.++++.+.+++
T Consensus         7 ~~~~~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~   45 (111)
T d1kjqa2           7 LRPAATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYAD   45 (111)
T ss_dssp             TSTTCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTT
T ss_pred             CCCCCCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCC
Confidence            3444 46999996 99999999999999999999997644

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.04  E-value=0.012  Score=40.45  Aligned_cols=54  Identities=11%  Similarity=0.115  Sum_probs=39.4

Q ss_pred             HHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc
Q 026217           41 AGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF   96 (241)
Q Consensus        41 ~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~   96 (241)
                      .+|.+...--++.+|+|.|+ |+++.+++..+...| +|+++.|+.++.+.+.+.+
T Consensus         7 ~~l~~~~~~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~   60 (177)
T d1nvta1           7 MALEEEIGRVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEI   60 (177)
T ss_dssp             HHHHHHHCCCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHH
T ss_pred             HHHHHhCCCcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHH
Confidence            34434333347789999996 999998887765555 9999999988877665344

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=96.03  E-value=0.0017  Score=48.06  Aligned_cols=95  Identities=15%  Similarity=0.098  Sum_probs=63.6

Q ss_pred             CCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCC---eeecCCCchhHHHHHHHHCCC-
Q 026217           48 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFD---EAFNYKEEPDLDAALKRYFPE-  120 (241)
Q Consensus        48 ~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~---~g~~---~~i~~~~~~~~~~~i~~~~~~-  120 (241)
                      .+++|++||-.+  .|+|..++.+|+.-+++|++++.++...+.+++.   .|..   .++..+.        ++.... 
T Consensus       104 ~~~~g~~VlD~~--aG~G~~~l~~a~~~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~--------~~~~~~~  173 (260)
T d2frna1         104 VAKPDELVVDMF--AGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDN--------RDFPGEN  173 (260)
T ss_dssp             HCCTTCEEEETT--CTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCT--------TTCCCCS
T ss_pred             hcCCccEEEECc--ceEcHHHHHHHHhCCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcch--------HHhccCC
Confidence            478999999988  4667777777876556999999999988888743   2442   2332221        122223 


Q ss_pred             CccEEE-eCCC--chhHHHHHHhhccCCEEEEEee
Q 026217          121 GINIYF-ENVG--GKMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       121 ~~d~v~-d~~g--~~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      .+|.|+ +...  ...+..+++.+++||.+.....
T Consensus       174 ~~D~Ii~~~p~~~~~~l~~a~~~l~~gG~lh~~~~  208 (260)
T d2frna1         174 IADRILMGYVVRTHEFIPKALSIAKDGAIIHYHNT  208 (260)
T ss_dssp             CEEEEEECCCSSGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred             CCCEEEECCCCchHHHHHHHHhhcCCCCEEEEEec
Confidence            689654 4332  3577788999999887765543

>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810)
species: Leishmania major [TaxId: 5664]

Probab=96.01  E-value=0.019  Score=41.96  Aligned_cols=99  Identities=7%  Similarity=-0.000  Sum_probs=67.4

Q ss_pred             cCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHH--CCCCccE
Q 026217           47 CSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRY--FPEGINI  124 (241)
Q Consensus        47 ~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~--~~~~~d~  124 (241)
                      ....++.+||=.|  .|+|..+.+++.....+|++++.+++-.+.+++.+.....+++... ++    .+.  .++.+|+
T Consensus        89 l~~~~~~~vLD~G--cG~G~~t~~ll~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~-d~----~~~~~~~~~fD~  161 (254)
T d1xtpa_          89 LPGHGTSRALDCG--AGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGMPVGKFILA-SM----ETATLPPNTYDL  161 (254)
T ss_dssp             STTCCCSEEEEET--CTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTSSEEEEEES-CG----GGCCCCSSCEEE
T ss_pred             CCCCCCCeEEEec--ccCChhhHHHHhhcCceEEEEcCCHHHHHhhhccccccccceeEEc-cc----cccccCCCccce
Confidence            3446677899888  6779989998888777999999999999999855543222222111 11    122  2237999


Q ss_pred             EEeCCC-----c----hhHHHHHHhhccCCEEEEEee
Q 026217          125 YFENVG-----G----KMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       125 v~d~~g-----~----~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      |+..-.     .    ..+..+.+.|+++|.++....
T Consensus       162 I~~~~vl~hl~d~d~~~~l~~~~~~LkpgG~iii~e~  198 (254)
T d1xtpa_         162 IVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKEN  198 (254)
T ss_dssp             EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             EEeeccccccchhhhHHHHHHHHHhcCCCcEEEEEec
Confidence            876442     1    236778888999999887543

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=95.93  E-value=0.016  Score=40.36  Aligned_cols=89  Identities=12%  Similarity=-0.015  Sum_probs=61.4

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      .+.++.|.|. |.+|...+++++.+|.+|+..++........+ ..+....    .  ++.+.++     ..|+|.-+..
T Consensus        43 ~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~-~~~~~~~----~--~l~~~l~-----~sD~v~~~~p  109 (188)
T d2naca1          43 EAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRLPESVEK-ELNLTWH----A--TREDMYP-----VCDVVTLNCP  109 (188)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCCHHHHH-HHTCEEC----S--SHHHHGG-----GCSEEEECSC
T ss_pred             cccceeeccc-cccchhhhhhhhccCceEEEEeeccccccccc-ccccccc----C--CHHHHHH-----hccchhhccc
Confidence            5789999995 99999999999999999999997654444444 4443211    1  3444443     3888877665


Q ss_pred             -ch-----hHHHHHHhhccCCEEEEEee
Q 026217          131 -GK-----MLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       131 -~~-----~~~~~~~~l~~~G~~v~~g~  152 (241)
                       ++     .-...+..|+++..+|.++.
T Consensus       110 lt~~T~~li~~~~l~~mk~ga~lIN~aR  137 (188)
T d2naca1         110 LHPETEHMINDETLKLFKRGAYIVNTAR  137 (188)
T ss_dssp             CCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             ccccchhhhHHHHHHhCCCCCEEEecCc
Confidence             21     23567778888877777654

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.91  E-value=0.0079  Score=46.34  Aligned_cols=73  Identities=21%  Similarity=0.295  Sum_probs=46.9

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe--eecCCCchhHHHHHHHHCCCCccEEEeC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFPEGINIYFEN  128 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~--~i~~~~~~~~~~~i~~~~~~~~d~v~d~  128 (241)
                      .+-+|||+||+|-+|...+..+...|.+|+++++....... . ......  ..|..+   ........  .++|.|+.+
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~-~-~~~~~~~~~~D~~~---~~~~~~~~--~~~d~Vih~   86 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT-E-DMFCDEFHLVDLRV---MENCLKVT--EGVDHVFNL   86 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC-G-GGTCSEEEECCTTS---HHHHHHHH--TTCSEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchh-h-hcccCcEEEeechh---HHHHHHHh--hcCCeEeec
Confidence            46689999999999999999999999999999754332211 1 111111  233333   22222222  259999988


Q ss_pred             CC
Q 026217          129 VG  130 (241)
Q Consensus       129 ~g  130 (241)
                      ++
T Consensus        87 a~   88 (363)
T d2c5aa1          87 AA   88 (363)
T ss_dssp             CC
T ss_pred             cc
Confidence            75

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=95.83  E-value=0.016  Score=40.33  Aligned_cols=82  Identities=15%  Similarity=0.113  Sum_probs=57.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCe------eecCCC--chhHHHHHHHHCCCCccEE
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE------AFNYKE--EPDLDAALKRYFPEGINIY  125 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~------~i~~~~--~~~~~~~i~~~~~~~~d~v  125 (241)
                      +|.|.|| |.+|.+...++...|.+|+..+++++..+.+. +-+...      .++.+-  ..++.+.+.     +.|++
T Consensus         9 KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~-~~~~n~~yl~~~~l~~~i~~t~~l~~a~~-----~ad~i   81 (189)
T d1n1ea2           9 KAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVN-EKRENVLFLKGVQLASNITFTSDVEKAYN-----GAEII   81 (189)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHH-HHTBCTTTSTTCBCCTTEEEESCHHHHHT-----TCSCE
T ss_pred             eEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHh-hcccccccccccccccccccchhhhhccC-----CCCEE
Confidence            6999996 99999999888888889999999999888876 433211      111110  003444443     48999


Q ss_pred             EeCCCchhHHHHHHhhc
Q 026217          126 FENVGGKMLDAVLLNMR  142 (241)
Q Consensus       126 ~d~~g~~~~~~~~~~l~  142 (241)
                      +-++....++..++.++
T Consensus        82 iiavPs~~~~~~~~~~~   98 (189)
T d1n1ea2          82 LFVIPTQFLRGFFEKSG   98 (189)
T ss_dssp             EECSCHHHHHHHHHHHC
T ss_pred             EEcCcHHHHHHHHHHHH
Confidence            99999877776666543

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=95.83  E-value=0.045  Score=36.35  Aligned_cols=95  Identities=12%  Similarity=0.000  Sum_probs=58.5

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC--CccEEEeCCC
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE--GINIYFENVG  130 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~--~~d~v~d~~g  130 (241)
                      .+|.|.|+.|.+|......++..|..|.+.++++....... .-+++.++...........+.+..+.  .=.+++|+++
T Consensus        10 ~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~-~~~~~~v~~~~~~~~~~~v~~~~~~~~~~~~iiiD~~S   88 (152)
T d2pv7a2          10 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESI-LANADVVIVSVPINLTLETIERLKPYLTENMLLADLTS   88 (152)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHH-HTTCSEEEECSCGGGHHHHHHHHGGGCCTTSEEEECCS
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchh-hhhccccccccchhhheeeeecccccccCCceEEEecc
Confidence            47999997799999999999999999999998776555444 44555544333321333334333322  1247888887


Q ss_pred             c--hhHHHHHHhhccCCEEEEE
Q 026217          131 G--KMLDAVLLNMRIQGRITLC  150 (241)
Q Consensus       131 ~--~~~~~~~~~l~~~G~~v~~  150 (241)
                      .  +..+...+.+  ..+++..
T Consensus        89 vk~~~~~~~~~~~--~~~~v~~  108 (152)
T d2pv7a2          89 VKREPLAKMLEVH--TGAVLGL  108 (152)
T ss_dssp             CCHHHHHHHHHHC--SSEEEEE
T ss_pred             cCHHHHHHHHHHc--cCCEEEe
Confidence            4  3333333332  3455443

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.81  E-value=0.059  Score=36.72  Aligned_cols=95  Identities=16%  Similarity=0.075  Sum_probs=59.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEEeC--CHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHC----------CC
Q 026217           54 YVFVSAASGAVGQLVGQFAKLV-GCYVVGSAG--SKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYF----------PE  120 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~-g~~v~~~~~--~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~----------~~  120 (241)
                      +|.|.|- |-+|+..+..+... ..+++++..  +......+. +++.+... .... ... ......          ..
T Consensus         4 rIaINGf-GRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~-~~~~~~~~-~~~~-~~~-~~~~~~~~~~~~~~~~~~   78 (172)
T d2czca2           4 KVGVNGY-GTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAK-ELGIPVYA-ASEE-FIP-RFEKEGFEVAGTLNDLLE   78 (172)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHH-HTTCCEEE-SSGG-GHH-HHHHHTCCCSCBHHHHHT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhh-hcCceeec-cccc-cee-eecccCccccchhhhhhc
Confidence            6899995 99999888877665 457777663  223445555 66654221 1111 111 111100          02


Q ss_pred             CccEEEeCCCc-hhHHHHHHhhccCCEEEEEeee
Q 026217          121 GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMI  153 (241)
Q Consensus       121 ~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~  153 (241)
                      ++|+|+||+|. .....+-.++..|-+.+..+.+
T Consensus        79 ~vDvViEcTG~f~~~~~~~~hl~~G~k~Vi~s~~  112 (172)
T d2czca2          79 KVDIIVDATPGGIGAKNKPLYEKAGVKAIFQGGE  112 (172)
T ss_dssp             TCSEEEECCSTTHHHHHHHHHHHHTCEEEECTTS
T ss_pred             cCCEEEECCCCCCCHHHHHHHHHcCCCEEEECCC
Confidence            69999999996 5666777788888888887764

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=95.78  E-value=0.0042  Score=47.48  Aligned_cols=73  Identities=12%  Similarity=0.059  Sum_probs=46.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHcCCCee-ecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKDKVDLLKNKFGFDEA-FNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g-~~v~~~~~~~~~~~~~~~~~g~~~~-i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      +|||+||+|-+|..+++.+...| .+|+++++...+...+.+.-....+ .|..+...+.+.+..    ++|+|+.+++
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~----~~d~Vih~a~   76 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVK----KCDVVLPLVA   76 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHH----HCSEEEECBC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHh----CCCccccccc
Confidence            59999999999999998887887 5899998765544433311111111 122222133333322    4999999887

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=95.77  E-value=0.028  Score=38.79  Aligned_cols=83  Identities=23%  Similarity=0.216  Sum_probs=59.7

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      .|.+|.|+|. |.+|...+++++.+|++|++.++++.+        +.....    . ++.+.++     .+|+|+.++.
T Consensus        41 ~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~~--------~~~~~~----~-~l~ell~-----~sDiv~~~~p  101 (181)
T d1qp8a1          41 QGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPKE--------GPWRFT----N-SLEEALR-----EARAAVCALP  101 (181)
T ss_dssp             TTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCCC--------SSSCCB----S-CSHHHHT-----TCSEEEECCC
T ss_pred             cCceEEEecc-ccccccceeeeeccccccccccccccc--------cceeee----e-chhhhhh-----ccchhhcccc
Confidence            5789999995 999999999999999999999976321        111111    1 3444443     3899988775


Q ss_pred             -c-h----hHHHHHHhhccCCEEEEEee
Q 026217          131 -G-K----MLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       131 -~-~----~~~~~~~~l~~~G~~v~~g~  152 (241)
                       + +    .-...+..++++..++.++.
T Consensus       102 l~~~t~~li~~~~l~~mk~~ailIN~~R  129 (181)
T d1qp8a1         102 LNKHTRGLVKYQHLALMAEDAVFVNVGR  129 (181)
T ss_dssp             CSTTTTTCBCHHHHTTSCTTCEEEECSC
T ss_pred             cccccccccccceeeeccccceEEeccc
Confidence             2 2    23677888999999988764

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=95.75  E-value=0.0046  Score=47.51  Aligned_cols=38  Identities=26%  Similarity=0.211  Sum_probs=33.6

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK   88 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~   88 (241)
                      +..+|+|+||+|.+|...+..+...|.+|++++|++++
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~   39 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKG   39 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCS
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcch
Confidence            45789999999999999999999999999999986543

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.75  E-value=0.049  Score=36.65  Aligned_cols=44  Identities=16%  Similarity=0.037  Sum_probs=38.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD   99 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~   99 (241)
                      +|.+.| .|.+|...+.-+.+.|.+|++.++++++.+.+. ..+..
T Consensus         3 kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~-~~~~~   46 (162)
T d3cuma2           3 QIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLV-AAGAS   46 (162)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHH-HTTCE
T ss_pred             EEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhh-hhhcc
Confidence            588999 599999888888888999999999999988888 77653

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=95.69  E-value=0.0052  Score=44.11  Aligned_cols=97  Identities=10%  Similarity=0.097  Sum_probs=63.6

Q ss_pred             CCCCcEEEEEcCCchHHHHHHHHHHH---cCCEEEEEeCCHHHHHHHHHHc---CCCeeecCCCchhHHHHHHHHCCCCc
Q 026217           49 PKQGEYVFVSAASGAVGQLVGQFAKL---VGCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEPDLDAALKRYFPEGI  122 (241)
Q Consensus        49 ~~~~~~vlI~ga~g~~G~~avqla~~---~g~~v~~~~~~~~~~~~~~~~~---g~~~~i~~~~~~~~~~~i~~~~~~~~  122 (241)
                      ++++.+||=.|  .|.|..+..+++.   -+++|++++.|++-.+.+++.+   +....+..... +    ..+...+.+
T Consensus        37 ~~~~~~vLDlG--CGtG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~-d----~~~~~~~~~  109 (225)
T d1im8a_          37 VTADSNVYDLG--CSRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCN-D----IRHVEIKNA  109 (225)
T ss_dssp             CCTTCEEEEES--CTTCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECS-C----TTTCCCCSE
T ss_pred             cCCCCEEEEec--cchhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhhcccchhhhccc-h----hhccccccc
Confidence            68999999998  5677777778775   3779999999999888887433   22211111111 1    112222356


Q ss_pred             cEEEeCCC----c-----hhHHHHHHhhccCCEEEEEee
Q 026217          123 NIYFENVG----G-----KMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       123 d~v~d~~g----~-----~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      |+++-+..    +     ..++.+.+.|+|+|.++....
T Consensus       110 d~i~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~li~~~~  148 (225)
T d1im8a_         110 SMVILNFTLQFLPPEDRIALLTKIYEGLNPNGVLVLSEK  148 (225)
T ss_dssp             EEEEEESCGGGSCGGGHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             eeeEEeeeccccChhhHHHHHHHHHHhCCCCceeecccc
Confidence            76655332    1     357889999999999988643

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=95.58  E-value=0.016  Score=40.74  Aligned_cols=85  Identities=20%  Similarity=0.180  Sum_probs=58.6

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      .|.+|.|+|. |.+|+..+++++.+|++|++.++...+        +....+.+.   ++.+.++.     .|++.-++.
T Consensus        44 ~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~--------~~~~~~~~~---~l~~l~~~-----~D~v~~~~p  106 (199)
T d1dxya1          44 GQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPMK--------GDHPDFDYV---SLEDLFKQ-----SDVIDLHVP  106 (199)
T ss_dssp             GGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCS--------SCCTTCEEC---CHHHHHHH-----CSEEEECCC
T ss_pred             cceeeeeeec-ccccccccccccccceeeeccCCccch--------hhhcchhHH---HHHHHHHh-----cccceeeec
Confidence            4679999995 999999999999999999999865322        111111111   44444443     788877664


Q ss_pred             -ch-----hHHHHHHhhccCCEEEEEee
Q 026217          131 -GK-----MLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       131 -~~-----~~~~~~~~l~~~G~~v~~g~  152 (241)
                       ++     .-...+..|+++..++.++.
T Consensus       107 lt~~T~~li~~~~l~~mk~~a~lIN~aR  134 (199)
T d1dxya1         107 GIEQNTHIINEAAFNLMKPGAIVINTAR  134 (199)
T ss_dssp             CCGGGTTSBCHHHHHHSCTTEEEEECSC
T ss_pred             ccccccccccHHHhhccCCceEEEeccc
Confidence             22     23567788888888888764

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.54  E-value=0.0059  Score=35.84  Aligned_cols=34  Identities=21%  Similarity=0.252  Sum_probs=29.9

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD   87 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~   87 (241)
                      .+|.|.|+ |.+|++.++-++.+|.++++.+..++
T Consensus         2 k~vgIlG~-GQLgrMl~~Aa~~LG~~v~vldp~~~   35 (78)
T d3etja2           2 KQVCVLGN-GQLGRMLRQAGEPLGIAVWPVGLDAE   35 (78)
T ss_dssp             EEEEEEBC-SHHHHHHHHHHGGGTEEEEEECTTSC
T ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCEEEEEcCCCC
Confidence            47999995 99999999999999999999996543

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.53  E-value=0.0097  Score=44.87  Aligned_cols=74  Identities=12%  Similarity=0.165  Sum_probs=47.0

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH--HHHHHHHHcCCCe-----eecCCCchhHHHHHHHHCCCCccEE
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD--KVDLLKNKFGFDE-----AFNYKEEPDLDAALKRYFPEGINIY  125 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~--~~~~~~~~~g~~~-----~i~~~~~~~~~~~i~~~~~~~~d~v  125 (241)
                      .+|||+||+|-+|..++..+...|.+|+++++...  ..+.++ .++.+.     -.|-.+...+.+.+...   ..+++
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---~~~~~   76 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLR-ELGIEGDIQYEDGDMADACSVQRAVIKA---QPQEV   76 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHH-HTTCGGGEEEEECCTTCHHHHHHHHHHH---CCSEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHH-HhcccCCcEEEEccccChHHhhhhhccc---ccccc
Confidence            37999999999999999988888999999997543  234444 444321     22333331233333332   46677


Q ss_pred             EeCCC
Q 026217          126 FENVG  130 (241)
Q Consensus       126 ~d~~g  130 (241)
                      +.+..
T Consensus        77 ~~~a~   81 (321)
T d1rpna_          77 YNLAA   81 (321)
T ss_dssp             EECCS
T ss_pred             ccccc
Confidence            76654

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=95.51  E-value=0.023  Score=36.23  Aligned_cols=41  Identities=20%  Similarity=0.134  Sum_probs=35.2

Q ss_pred             HhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 026217           45 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK   86 (241)
Q Consensus        45 ~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~   86 (241)
                      +.....++.+|+|.|+ |.+|.-++..++.+|.+|..+.+++
T Consensus        15 ~~l~~~~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          15 EELDYEPGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             HHCCSCCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             HHHhhCCCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccc
Confidence            3456678899999996 9999999999999999999999763

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=95.49  E-value=0.0039  Score=42.36  Aligned_cols=86  Identities=16%  Similarity=0.089  Sum_probs=54.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC-----eeecCCCchhHHHHHHHHCCCCccEEEeC
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-----EAFNYKEEPDLDAALKRYFPEGINIYFEN  128 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~-----~~i~~~~~~~~~~~i~~~~~~~~d~v~d~  128 (241)
                      +|+|+|+ |.+|.+....+...|..|..+++++++.+... ..+.+     ..+..    +..+.+.     .+|++|-+
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~-----~~D~iii~   70 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCSVN-LVETDGSIFNESLTA----NDPDFLA-----TSDLLLVT   70 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEEEE-EECTTSCEEEEEEEE----SCHHHHH-----TCSEEEEC
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhhhhc-cccCCcccccccccc----chhhhhc-----ccceEEEe
Confidence            5899996 99999888888889999999998876444332 22321     11111    1122232     59999999


Q ss_pred             CCchhHHHHHH----hhccCCEEEEE
Q 026217          129 VGGKMLDAVLL----NMRIQGRITLC  150 (241)
Q Consensus       129 ~g~~~~~~~~~----~l~~~G~~v~~  150 (241)
                      +........++    .+.++..++.+
T Consensus        71 vka~~~~~~~~~l~~~~~~~~~Iv~~   96 (167)
T d1ks9a2          71 LKAWQVSDAVKSLASTLPVTTPILLI   96 (167)
T ss_dssp             SCGGGHHHHHHHHHTTSCTTSCEEEE
T ss_pred             ecccchHHHHHhhccccCcccEEeec
Confidence            98755444444    44445556654

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.43  E-value=0.006  Score=42.84  Aligned_cols=91  Identities=12%  Similarity=0.073  Sum_probs=60.0

Q ss_pred             CCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCCe----eecCCCchhHHHHHHHHCCCC
Q 026217           49 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDE----AFNYKEEPDLDAALKRYFPEG  121 (241)
Q Consensus        49 ~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~---~~g~~~----~i~~~~~~~~~~~i~~~~~~~  121 (241)
                      +++| +||=+|  .|.|..+..+++ .|++|++++.++...+.+++   ..+.+.    +.|..+.         ..++.
T Consensus        29 ~~~g-rvLDiG--cG~G~~~~~la~-~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~---------~~~~~   95 (198)
T d2i6ga1          29 VAPG-RTLDLG--CGNGRNSLYLAA-NGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTL---------TFDGE   95 (198)
T ss_dssp             SCSC-EEEEET--CTTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTC---------CCCCC
T ss_pred             CCCC-cEEEEC--CCCCHHHHHHHH-HhhhhccccCcHHHHHHHHHHhhhccccchhhhheecccc---------ccccc
Confidence            4555 799988  458888887775 58999999999988877652   233332    1111111         01237


Q ss_pred             ccEEEeCCC------c---hhHHHHHHhhccCCEEEEEee
Q 026217          122 INIYFENVG------G---KMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       122 ~d~v~d~~g------~---~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      ||+|+...-      .   ..+..+.++|+++|.++....
T Consensus        96 fD~I~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~  135 (198)
T d2i6ga1          96 YDFILSTVVMMFLEAQTIPGLIANMQRCTKPGGYNLIVAA  135 (198)
T ss_dssp             EEEEEEESCGGGSCTTHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             ccEEEEeeeeecCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence            999886332      1   256778888999999887654

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=95.37  E-value=0.12  Score=34.83  Aligned_cols=88  Identities=9%  Similarity=0.066  Sum_probs=58.7

Q ss_pred             EEEEEcCCchHHHH-HHHHHHHc-CCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCc
Q 026217           54 YVFVSAASGAVGQL-VGQFAKLV-GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG  131 (241)
Q Consensus        54 ~vlI~ga~g~~G~~-avqla~~~-g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~  131 (241)
                      +|.|.|+ |.+|.. .+...+.. +..+++.++++++.+.+.+.++...+++     ++.+.+ +   ..+|.|+-|+..
T Consensus         3 rvgiiG~-G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~-----~~~~ll-~---~~iD~V~I~tp~   72 (167)
T d1xeaa1           3 KIAMIGL-GDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCT-----DYRDVL-Q---YGVDAVMIHAAT   72 (167)
T ss_dssp             EEEEECC-CHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCS-----STTGGG-G---GCCSEEEECSCG
T ss_pred             EEEEEcC-CHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhcccccccc-----cHHHhc-c---cccceecccccc
Confidence            5889995 999964 45566555 5577778888888887776888765442     221112 1   259999999886


Q ss_pred             -hhHHHHHHhhccCCEEEEEee
Q 026217          132 -KMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       132 -~~~~~~~~~l~~~G~~v~~g~  152 (241)
                       .+...+..++..| .-+.+..
T Consensus        73 ~~H~~~~~~al~~g-k~V~~EK   93 (167)
T d1xeaa1          73 DVHSTLAAFFLHLG-IPTFVDK   93 (167)
T ss_dssp             GGHHHHHHHHHHTT-CCEEEES
T ss_pred             cccccccccccccc-cccccCC
Confidence             5677777777765 4455543

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=95.34  E-value=0.026  Score=37.49  Aligned_cols=82  Identities=21%  Similarity=0.109  Sum_probs=46.1

Q ss_pred             EEEEEcCCchHHHHHHHH-HHHcC---CEEEEEeCCHHHHHHHHHHcCC-CeeecCCCchhHHHHHHHHCCCCccEEEeC
Q 026217           54 YVFVSAASGAVGQLVGQF-AKLVG---CYVVGSAGSKDKVDLLKNKFGF-DEAFNYKEEPDLDAALKRYFPEGINIYFEN  128 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avql-a~~~g---~~v~~~~~~~~~~~~~~~~~g~-~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~  128 (241)
                      +|.|.||+|-+|+-.+++ +.+..   .+++...++...-.... ..+. ..+.+..+   . ..+.     ++|++|-|
T Consensus         3 kVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~-~~~~~~~~~~~~~---~-~~~~-----~~DivF~a   72 (146)
T d1t4ba1           3 NVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPS-FGGTTGTLQDAFD---L-EALK-----ALDIIVTC   72 (146)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCG-GGTCCCBCEETTC---H-HHHH-----TCSEEEEC
T ss_pred             EEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccccccccc-ccCCceeeecccc---h-hhhh-----cCcEEEEe
Confidence            689999999999999985 44432   36777765532211111 0111 11111111   1 1122     59999999


Q ss_pred             CCchhHHHHHHhhccCC
Q 026217          129 VGGKMLDAVLLNMRIQG  145 (241)
Q Consensus       129 ~g~~~~~~~~~~l~~~G  145 (241)
                      ++.+........+...|
T Consensus        73 ~~~~~s~~~~~~~~~~g   89 (146)
T d1t4ba1          73 QGGDYTNEIYPKLRESG   89 (146)
T ss_dssp             SCHHHHHHHHHHHHHTT
T ss_pred             cCchHHHHhhHHHHhcC
Confidence            99876555555554444

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=95.33  E-value=0.2  Score=33.02  Aligned_cols=96  Identities=9%  Similarity=-0.031  Sum_probs=57.6

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHH--HcCCCeeecCCCchhHHHHHHHHCCCCccEEEe
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKV-DLLKN--KFGFDEAFNYKEEPDLDAALKRYFPEGINIYFE  127 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~-~~~~~--~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d  127 (241)
                      +.+.++|.|. |.+|..+++.+...|.+|+++...+++. +.+.+  ..|.. ++.- +. .-.+.+++..-+.+|.++-
T Consensus         2 ~knHiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~-vi~G-d~-~d~~~L~~a~i~~a~~vi~   77 (153)
T d1id1a_           2 RKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNAD-VIPG-DS-NDSSVLKKAGIDRCRAILA   77 (153)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCE-EEES-CT-TSHHHHHHHTTTTCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcE-EEEc-cC-cchHHHHHhccccCCEEEE
Confidence            3467999996 9999999999999999999998776532 33331  22443 2221 11 1223344443347899998


Q ss_pred             CCCchh----HHHHHHhhccCCEEEEE
Q 026217          128 NVGGKM----LDAVLLNMRIQGRITLC  150 (241)
Q Consensus       128 ~~g~~~----~~~~~~~l~~~G~~v~~  150 (241)
                      +++.+.    .....+.+.+..+++.-
T Consensus        78 ~~~~d~~n~~~~~~~r~~~~~~~iia~  104 (153)
T d1id1a_          78 LSDNDADNAFVVLSAKDMSSDVKTVLA  104 (153)
T ss_dssp             CSSCHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred             ccccHHHHHHHHHHHHHhCCCCceEEE
Confidence            888642    22233334455555543

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=95.24  E-value=0.0084  Score=44.47  Aligned_cols=35  Identities=14%  Similarity=0.152  Sum_probs=31.6

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK   86 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~   86 (241)
                      ..+|||+||+|-+|...+..+...|.+|++++|++
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~   37 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRES   37 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCC
Confidence            45799999999999999999999999999999764

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=95.21  E-value=0.12  Score=35.04  Aligned_cols=44  Identities=16%  Similarity=-0.020  Sum_probs=37.3

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF   98 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~   98 (241)
                      .+|.++| .|.+|...+.-+...|.+|++.++++++.+.+. +.++
T Consensus         3 ~nIg~IG-lG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~-~~~~   46 (176)
T d2pgda2           3 ADIALIG-LAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFL-ANEA   46 (176)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHH-HTTT
T ss_pred             CcEEEEe-EhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHH-Hhcc
Confidence            3588999 599999988888889999999999999998887 4443

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.19  E-value=0.26  Score=33.54  Aligned_cols=91  Identities=12%  Similarity=0.109  Sum_probs=58.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEEe-CCHHHHHHHHHHcCCCee-ecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           54 YVFVSAASGAVGQLVGQFAKLV-GCYVVGSA-GSKDKVDLLKNKFGFDEA-FNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~-g~~v~~~~-~~~~~~~~~~~~~g~~~~-i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      ++.|.| +|.+|...++..+.. ++++++++ +++++.+.+.++++.... -.++   ++.+.+.+   ..+|+|+-|+.
T Consensus         3 ki~iIG-~G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~ll~~---~~iD~v~I~tp   75 (184)
T d1ydwa1           3 RIGVMG-CADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHG---SYESLLED---PEIDALYVPLP   75 (184)
T ss_dssp             EEEEES-CCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEES---SHHHHHHC---TTCCEEEECCC
T ss_pred             EEEEEc-CCHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceeecC---cHHHhhhc---cccceeeeccc
Confidence            588999 499998888777776 66888664 555665555547775321 0121   44444432   26999999998


Q ss_pred             c-hhHHHHHHhhccCCEEEEEee
Q 026217          131 G-KMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       131 ~-~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      . .++..+..++..+ .=+.+..
T Consensus        76 ~~~h~~~~~~~l~~g-~~v~~EK   97 (184)
T d1ydwa1          76 TSLHVEWAIKAAEKG-KHILLEK   97 (184)
T ss_dssp             GGGHHHHHHHHHTTT-CEEEECS
T ss_pred             chhhcchhhhhhhcc-ceeeccc
Confidence            6 5777777777764 5555543

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=95.13  E-value=0.0082  Score=41.68  Aligned_cols=95  Identities=11%  Similarity=-0.001  Sum_probs=55.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCch
Q 026217           54 YVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGK  132 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~-g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~  132 (241)
                      +|.|.||+|-+|+-.++++..+ ..++..+.++...-..+. +.... ....... ... ...+..-.++|++|-|....
T Consensus         7 kVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~~aG~~~~-~~~~~-~~~~~~~-~~~-~~~~~~~~~~Dvvf~alp~~   82 (183)
T d2cvoa1           7 RIAVLGASGYTGAEIVRLLANHPQFRIKVMTADRKAGEQFG-SVFPH-LITQDLP-NLV-AVKDADFSNVDAVFCCLPHG   82 (183)
T ss_dssp             EEEEESCSSHHHHHHHHHHTTCSSEEEEEEECSTTTTSCHH-HHCGG-GTTSCCC-CCB-CGGGCCGGGCSEEEECCSSS
T ss_pred             EEEEECcccHHHHHHHHHHHhCCCceEEEEeccccCCCccc-ccccc-ccccccc-cch-hhhhhhhcccceeeeccccc
Confidence            6899999999999999999988 447766664332211122 11110 0000000 000 00000012699999999987


Q ss_pred             hHHHHHHhhccCCEEEEEee
Q 026217          133 MLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       133 ~~~~~~~~l~~~G~~v~~g~  152 (241)
                      ........+...+.++....
T Consensus        83 ~s~~~~~~l~~~~~~v~~~~  102 (183)
T d2cvoa1          83 TTQEIIKGLPQELKIVDLSA  102 (183)
T ss_dssp             HHHHHHHTSCSSCEEEECSS
T ss_pred             hHHHHHHHHHhcCcccccch
Confidence            66666677888888776543

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=95.12  E-value=0.039  Score=35.32  Aligned_cols=42  Identities=14%  Similarity=-0.011  Sum_probs=34.2

Q ss_pred             HHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 026217           43 FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   85 (241)
Q Consensus        43 l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~   85 (241)
                      +.+...-.++.+|+|.|| |.+|+-+++.+..+|.+|+++.+.
T Consensus        21 i~~~~~~~~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~   62 (123)
T d1nhpa2          21 LKQKTVDPEVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDIL   62 (123)
T ss_dssp             HHHHHTCTTCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             HHHHhhccCCCEEEEECC-hHHHHHHHHHhhccceEEEEEEec
Confidence            333344456789999996 999999999999999999999865

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=95.09  E-value=0.016  Score=38.66  Aligned_cols=81  Identities=14%  Similarity=0.073  Sum_probs=50.1

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCchhH
Q 026217           55 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKML  134 (241)
Q Consensus        55 vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~  134 (241)
                      |-+.| +|.+|...++.++..+..+.+..|++++.+.+.+..+. ...+..+.      +     ...|+||-|+..+.+
T Consensus         2 IgfIG-~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~~-~~~~~~~~------~-----~~~DiVil~v~d~~i   68 (153)
T d2i76a2           2 LNFVG-TGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYGG-KAATLEKH------P-----ELNGVVFVIVPDRYI   68 (153)
T ss_dssp             CEEES-CCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTCC-CCCSSCCC------C-----C---CEEECSCTTTH
T ss_pred             EEEEe-CcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcccc-cccchhhh------h-----ccCcEEEEeccchhh
Confidence            35678 59999998876654333345788999999888845543 22222111      1     248999999988788


Q ss_pred             HHHHHhhccCCEEE
Q 026217          135 DAVLLNMRIQGRIT  148 (241)
Q Consensus       135 ~~~~~~l~~~G~~v  148 (241)
                      ...+..+...++++
T Consensus        69 ~~v~~~l~~~~~iv   82 (153)
T d2i76a2          69 KTVANHLNLGDAVL   82 (153)
T ss_dssp             HHHHTTTCCSSCCE
T ss_pred             hHHHhhhcccceee
Confidence            88888887555443

>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.07  E-value=0.034  Score=41.42  Aligned_cols=96  Identities=18%  Similarity=0.109  Sum_probs=64.0

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCC-------C--eeecCCCchhHHHHHHHHCC
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGF-------D--EAFNYKEEPDLDAALKRYFP  119 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~g~-------~--~~i~~~~~~~~~~~i~~~~~  119 (241)
                      ...++|||.|  ||-|..+-.++++.+. +|.++...++=.+.+++-+..       .  .++.   . |-.+.+++..+
T Consensus        79 ~~pk~VLiiG--gG~G~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~~f~~~~~~~~~~r~~i~~---~-Da~~~l~~~~~  152 (290)
T d1xj5a_          79 PNPKKVLVIG--GGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVI---G-DGVAFLKNAAE  152 (290)
T ss_dssp             SCCCEEEEET--CSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEE---S-CHHHHHHTSCT
T ss_pred             CCCcceEEec--CCchHHHHHHHhcccceeeEEecCCHHHHHHHHHhchhhhccccCCCcEEEE---c-cHHHHHhhccc
Confidence            3446899999  5556666677787776 899999998888888833311       1  1111   1 44555655555


Q ss_pred             CCccEEE-eCCC----------chhHHHHHHhhccCCEEEEEe
Q 026217          120 EGINIYF-ENVG----------GKMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       120 ~~~d~v~-d~~g----------~~~~~~~~~~l~~~G~~v~~g  151 (241)
                      +.+|+++ |+..          .+.++.+.++|+++|.++.=.
T Consensus       153 ~~yDvIi~D~~dp~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~  195 (290)
T d1xj5a_         153 GSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA  195 (290)
T ss_dssp             TCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred             cCccEEEEcCCCCCCcchhhCCHHHHHHHHHhcCCCcEEEEec
Confidence            5899775 4442          125788999999999998743

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=95.05  E-value=0.17  Score=34.22  Aligned_cols=96  Identities=14%  Similarity=0.126  Sum_probs=56.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCC--HHHHHHHHHHcCCCeeecCCCch-hHHH-------HHHHHCCCCc
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVG-CYVVGSAGS--KDKVDLLKNKFGFDEAFNYKEEP-DLDA-------ALKRYFPEGI  122 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g-~~v~~~~~~--~~~~~~~~~~~g~~~~i~~~~~~-~~~~-------~i~~~~~~~~  122 (241)
                      +|.|.| -|-+|+...+.+...+ .+++++...  ......+. .++.+......+.. .+.+       .+.+.. .++
T Consensus         3 ~VgING-fGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~-~~v   79 (171)
T d1cf2o1           3 AVAING-YGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMAL-KKGYDLYVAIPERVKLFEKAGIEVAGTVDDML-DEA   79 (171)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHH-HTTCCEEESSGGGHHHHHHTTCCCCEEHHHHH-HTC
T ss_pred             EEEEEc-CcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHH-hcCCceEecccccceeecccCcccCCChhHhh-cCC
Confidence            689999 5999999999877665 577766632  23344555 55544322111110 0000       000110 159


Q ss_pred             cEEEeCCCc-hhHHHHHHhhccCCEEEEEee
Q 026217          123 NIYFENVGG-KMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       123 d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      |+|+||+|. .....+-..+..+-+.+..+.
T Consensus        80 DvViEcTG~f~~~~~~~~hl~~G~K~vi~~~  110 (171)
T d1cf2o1          80 DIVIDCTPEGIGAKNLKMYKEKGIKAIFQGG  110 (171)
T ss_dssp             SEEEECCSTTHHHHHHHHHHHTTCEEEECTT
T ss_pred             CEEEEccCCCCCHHHHHHHHHcCCCEEEECC
Confidence            999999995 455666677877778777654

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=95.03  E-value=0.027  Score=35.82  Aligned_cols=37  Identities=14%  Similarity=0.031  Sum_probs=32.4

Q ss_pred             CCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 026217           48 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   85 (241)
Q Consensus        48 ~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~   85 (241)
                      .++...+|+|.|| |.+|.-+++.++.+|.+|+.+.++
T Consensus        18 ~l~~p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~   54 (117)
T d1onfa2          18 NIKESKKIGIVGS-GYIAVELINVIKRLGIDSYIFARG   54 (117)
T ss_dssp             TCCCCSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSS
T ss_pred             ccCCCCEEEEECC-chHHHHHHHHHHhccccceeeehh
Confidence            4555689999996 999999999999999999999976

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=95.00  E-value=0.015  Score=42.30  Aligned_cols=34  Identities=15%  Similarity=0.050  Sum_probs=30.2

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   85 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~   85 (241)
                      ..++|+|+|| |..|+++...+...|++|+++.++
T Consensus         3 ~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~   36 (265)
T d2voua1           3 TTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERS   36 (265)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCC
Confidence            4578999997 999999999898999999999864

>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Catechol O-methyltransferase, COMT
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.96  E-value=0.022  Score=40.46  Aligned_cols=100  Identities=12%  Similarity=0.123  Sum_probs=61.1

Q ss_pred             cCCCCCcEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---HcCCCeeecCCCchhHHHH---HHHHC
Q 026217           47 CSPKQGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAA---LKRYF  118 (241)
Q Consensus        47 ~~~~~~~~vlI~ga~g~~G~~avqla~~~--g~~v~~~~~~~~~~~~~~~---~~g~~~~i~~~~~~~~~~~---i~~~~  118 (241)
                      .+.....+||-+|  ++.|..++.+|+.+  +.+|++++.+++..+.+++   ..|...-+..... +..+.   +.+..
T Consensus        52 v~~~kpk~ILEiG--t~~G~Sti~la~al~~~g~v~sid~~~~~~~~a~~~~~~~gl~~~i~l~~G-d~~e~l~~l~~~~  128 (214)
T d2cl5a1          52 IREYSPSLVLELG--AYCGYSAVRMARLLQPGARLLTMEMNPDYAAITQQMLNFAGLQDKVTILNG-ASQDLIPQLKKKY  128 (214)
T ss_dssp             HHHHCCSEEEEEC--CTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEES-CHHHHGGGHHHHS
T ss_pred             HHhhCCCEEEEEc--cCchhHHHHHHHhCCCccEEEEEeccHHHHHHHHHHHHHcCCCccceeeec-cccccccchhhcc
Confidence            3444557899999  77788888899876  5699999999887776652   3455322222222 33333   33322


Q ss_pred             C-CCccEEEeCCC-ch-----hHHHHHHhhccCCEEEE
Q 026217          119 P-EGINIYFENVG-GK-----MLDAVLLNMRIQGRITL  149 (241)
Q Consensus       119 ~-~~~d~v~d~~g-~~-----~~~~~~~~l~~~G~~v~  149 (241)
                      + +.+|++|--.. ..     .+...++++++||.++.
T Consensus       129 ~~~~~D~ifiD~~~~~~~~~~~l~~~~~lLkpGGvIv~  166 (214)
T d2cl5a1         129 DVDTLDMVFLDHWKDRYLPDTLLLEKCGLLRKGTVLLA  166 (214)
T ss_dssp             CCCCEEEEEECSCGGGHHHHHHHHHHTTCEEEEEEEEE
T ss_pred             cccccceeeecccccccccHHHHHHHhCccCCCcEEEE
Confidence            2 37998864333 21     23445567889886554

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.96  E-value=0.065  Score=40.61  Aligned_cols=31  Identities=23%  Similarity=0.150  Sum_probs=28.8

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEEe
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSA   83 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~~   83 (241)
                      ++|||+||+|-+|...+..+...|.+|++++
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld   33 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVID   33 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEE
Confidence            5899999999999999999999999999986

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=94.95  E-value=0.14  Score=34.97  Aligned_cols=82  Identities=16%  Similarity=0.037  Sum_probs=52.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHHHHcCCCee----ecC----CCchhHHHHHHHHCCCCcc
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK--DKVDLLKNKFGFDEA----FNY----KEEPDLDAALKRYFPEGIN  123 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~--~~~~~~~~~~g~~~~----i~~----~~~~~~~~~i~~~~~~~~d  123 (241)
                      .|.|.|+ |.+|.+.+..+...|.+|+..++..  +..+.+. +-.....    +..    ... ++.+.+.     ..|
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~-~~~~~~~~~~~~~~~~i~~~~-~~~~~~~-----~ad   73 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEILKSIS-AGREHPRLGVKLNGVEIFWPE-QLEKCLE-----NAE   73 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHH-TTCCBTTTTBCCCSEEEECGG-GHHHHHT-----TCS
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHh-hhhhhhhhcchhccccccccc-cHHHHHh-----ccc
Confidence            5889996 9999998888888899999988642  2334443 2111100    000    011 4444443     489


Q ss_pred             EEEeCCCchhHHHHHHhhcc
Q 026217          124 IYFENVGGKMLDAVLLNMRI  143 (241)
Q Consensus       124 ~v~d~~g~~~~~~~~~~l~~  143 (241)
                      +++-++....++..++.+.+
T Consensus        74 ~Ii~avps~~~~~~~~~l~~   93 (180)
T d1txga2          74 VVLLGVSTDGVLPVMSRILP   93 (180)
T ss_dssp             EEEECSCGGGHHHHHHHHTT
T ss_pred             hhhcccchhhhHHHHHhhcc
Confidence            99999998777777776555

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=94.95  E-value=0.093  Score=35.33  Aligned_cols=97  Identities=13%  Similarity=0.033  Sum_probs=64.9

Q ss_pred             hhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchh
Q 026217           30 GILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPD  109 (241)
Q Consensus        30 a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~  109 (241)
                      .-+|+.....+..|....---.|.+|+|.|.+..+|.-+..++...|++|+...+..                    . +
T Consensus        15 ~~~PcTp~aI~~lL~~y~i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t--------------------~-~   73 (166)
T d1b0aa1          15 RLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT--------------------K-N   73 (166)
T ss_dssp             SSCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC--------------------S-C
T ss_pred             CCCCchHHHHHHHHHHcCcccccceEEEEeccccccHHHHHHHHHhhcccccccccc--------------------c-h
Confidence            445555555555554332235799999999989999999999999999987765321                    1 3


Q ss_pred             HHHHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeee
Q 026217          110 LDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI  153 (241)
Q Consensus       110 ~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~  153 (241)
                      +.+.+++     .|+++-++|...+- --+.++++..++.+|..
T Consensus        74 l~~~~~~-----ADivI~a~G~p~~i-~~~~vk~g~vvIDvGi~  111 (166)
T d1b0aa1          74 LRHHVEN-----ADLLIVAVGKPGFI-PGDWIKEGAIVIDVGIN  111 (166)
T ss_dssp             HHHHHHH-----CSEEEECSCCTTCB-CTTTSCTTCEEEECCCE
T ss_pred             hHHHHhh-----hhHhhhhccCcccc-cccccCCCcEEEecCce
Confidence            3344443     88899888853221 12357788888887763

>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Carminomycin 4-O-methyltransferase
species: Streptomyces peucetius [TaxId: 1950]

Probab=94.92  E-value=0.0092  Score=43.67  Aligned_cols=100  Identities=14%  Similarity=0.130  Sum_probs=62.8

Q ss_pred             HhcCCCCCcEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HcCCCeeecCCCchhHHHHHHHHCCC
Q 026217           45 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYFPE  120 (241)
Q Consensus        45 ~~~~~~~~~~vlI~ga~g~~G~~avqla~~~-g~~v~~~~~~~~~~~~~~~---~~g~~~~i~~~~~~~~~~~i~~~~~~  120 (241)
                      ....+.+..+||=+|  +|.|..+..++++. +.++++++. ++..+.+++   +.|...-+..... ++.    +...+
T Consensus        74 ~~~d~~~~~~VLDvG--cG~G~~~~~la~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~rv~~~~~-D~~----~~~~~  145 (253)
T d1tw3a2          74 AAYDWTNVRHVLDVG--GGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEG-DFF----EPLPR  145 (253)
T ss_dssp             HHSCCTTCSEEEEET--CTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEEC-CTT----SCCSS
T ss_pred             hhcCCccCCEEEEeC--CCCCHHHHHHHHhcceeEEEEccC-HHHHHHHHHHHHHhhcccchhhccc-cch----hhccc
Confidence            445667778999998  78899999999988 679999885 444444442   2333211111111 211    11123


Q ss_pred             CccEEEeCCC-----c----hhHHHHHHhhccCCEEEEEee
Q 026217          121 GINIYFENVG-----G----KMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       121 ~~d~v~d~~g-----~----~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      ++|+|+-...     .    ..++.+.+.|+|+|++++...
T Consensus       146 ~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkPGG~l~i~e~  186 (253)
T d1tw3a2         146 KADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHER  186 (253)
T ss_dssp             CEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             chhheeeccccccCCchhhHHHHHHHHHhcCCCcEEEEEec
Confidence            6898874332     1    246788899999999998754

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=94.92  E-value=0.068  Score=37.94  Aligned_cols=96  Identities=9%  Similarity=0.017  Sum_probs=59.7

Q ss_pred             HhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC-eeecCCCchhHHHHHHHHCCCCcc
Q 026217           45 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEPDLDAALKRYFPEGIN  123 (241)
Q Consensus        45 ~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~-~~i~~~~~~~~~~~i~~~~~~~~d  123 (241)
                      ......++.+||=.|  .|.|..+..++ ..|.+|++++.+++..+.+++...-. ..+..... ++      ..++.+|
T Consensus        14 ~~~~~~~~~~VLDiG--cG~G~~~~~l~-~~g~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~~-~~------~~~~~fD   83 (225)
T d2p7ia1          14 AFTPFFRPGNLLELG--SFKGDFTSRLQ-EHFNDITCVEASEEAISHAQGRLKDGITYIHSRFE-DA------QLPRRYD   83 (225)
T ss_dssp             HHGGGCCSSCEEEES--CTTSHHHHHHT-TTCSCEEEEESCHHHHHHHHHHSCSCEEEEESCGG-GC------CCSSCEE
T ss_pred             HhhhhCCCCcEEEEe--CCCcHHHHHHH-HcCCeEEEEeCcHHHhhhhhccccccccccccccc-cc------ccccccc
Confidence            334445677899988  56677776665 45789999999999999998554321 12221111 11      1123799


Q ss_pred             EEEeCCCc-------hhHHHHH-HhhccCCEEEEE
Q 026217          124 IYFENVGG-------KMLDAVL-LNMRIQGRITLC  150 (241)
Q Consensus       124 ~v~d~~g~-------~~~~~~~-~~l~~~G~~v~~  150 (241)
                      +|+..-.=       ..+..+. ++|+++|.++..
T Consensus        84 ~I~~~~vleh~~d~~~~l~~i~~~~Lk~gG~l~i~  118 (225)
T d2p7ia1          84 NIVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLV  118 (225)
T ss_dssp             EEEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEE
T ss_pred             cccccceeEecCCHHHHHHHHHHHhcCCCceEEEE
Confidence            99753321       1344555 578999988864

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=94.90  E-value=0.094  Score=37.20  Aligned_cols=90  Identities=12%  Similarity=0.227  Sum_probs=56.3

Q ss_pred             EEEEEcCCchHHHH-HHHHHHHc-CCEEEEEe-CCHHHHHHHHHHcCCC--eeecCCCchhHHHHHHHHCCCCccEEEeC
Q 026217           54 YVFVSAASGAVGQL-VGQFAKLV-GCYVVGSA-GSKDKVDLLKNKFGFD--EAFNYKEEPDLDAALKRYFPEGINIYFEN  128 (241)
Q Consensus        54 ~vlI~ga~g~~G~~-avqla~~~-g~~v~~~~-~~~~~~~~~~~~~g~~--~~i~~~~~~~~~~~i~~~~~~~~d~v~d~  128 (241)
                      +|.|+|. |.+|.. .+...+.. +++|++++ +++++.+.+.+++|..  .+..++   ++.+.+.   ...+|.|+-|
T Consensus        35 riaiIG~-G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~---d~~ell~---~~~iD~V~I~  107 (221)
T d1h6da1          35 GYAIVGL-GKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYS---NFDKIAK---DPKIDAVYII  107 (221)
T ss_dssp             EEEEECC-SHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSS---SGGGGGG---CTTCCEEEEC
T ss_pred             EEEEEcC-cHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhccccccccccC---chhhhcc---cccceeeeec
Confidence            7899994 999863 44444444 67877554 5667766666588764  232233   2222221   2369999998


Q ss_pred             CCc-hhHHHHHHhhccCCEEEEEe
Q 026217          129 VGG-KMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       129 ~g~-~~~~~~~~~l~~~G~~v~~g  151 (241)
                      +.. .+...+..++.. |+-+.+.
T Consensus       108 tp~~~H~~~~~~al~~-gk~v~~E  130 (221)
T d1h6da1         108 LPNSLHAEFAIRAFKA-GKHVMCE  130 (221)
T ss_dssp             SCGGGHHHHHHHHHHT-TCEEEEC
T ss_pred             cchhhhhhHHHHhhhc-chhhhcC
Confidence            886 567777777766 4555553

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=94.88  E-value=0.055  Score=36.12  Aligned_cols=144  Identities=16%  Similarity=0.046  Sum_probs=72.4

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHcCCCe--eecCCCchhHHHHHHHHCCCCccEEE
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGC---YVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFPEGINIYF  126 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~---~v~~~~~~~~~~~~~~~~~g~~~--~i~~~~~~~~~~~i~~~~~~~~d~v~  126 (241)
                      |=+|.|.||+|-+|.-.++++..+..   ++...+++...-..+.  .....  ..+..+. +         ....|+++
T Consensus         1 g~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~G~~~~--~~~~~~~~~~~~~~-~---------~~~~d~~f   68 (154)
T d2gz1a1           1 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLK--FKDQDITIEETTET-A---------FEGVDIAL   68 (154)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGTTCEEE--ETTEEEEEEECCTT-T---------TTTCSEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHcCCCCceEEEEeccccccccccc--ccCCcccccccchh-h---------hhhhhhhh
Confidence            34799999999999999999988853   5555553311111000  00111  1111111 1         12689999


Q ss_pred             eCCCch-hHHHHHHhhccCCEEEEEeeecccCCCCC--CCccChHHHhhcceEEEEeecccccchhHHHHHHHHHHHHcC
Q 026217          127 ENVGGK-MLDAVLLNMRIQGRITLCGMISQYNNDKP--EGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEG  203 (241)
Q Consensus       127 d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  203 (241)
                      -+.+.. ......+....+.+++..+..-..+...+  ....+......+ .+++..     +-.....+..+.-+.++|
T Consensus        69 ~~~~~~~s~~~~~~~~~~~~~VIDlSsdfR~~~~~~~~~pe~n~~~~~~~-~~iIAn-----PgC~tt~i~~l~PL~~~~  142 (154)
T d2gz1a1          69 FSAGSSTSAKYAPYAVKAGVVVVDNTSYFRQNPDVPLVVPEVNAHALDAH-NGIIAC-----PNAAWNSVQIAETLHERG  142 (154)
T ss_dssp             ECSCHHHHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCHHHHGGGGGGC-CSEEEC-----CCTHHHHHHHHHHHHHTT
T ss_pred             hccCccchhhHHhhhccccceehhcChhhhccCCcccccchhhHHHhcCc-CceEEC-----CCCHHHHHHHHHHHHHhc
Confidence            999864 44444455566777777665322110000  011111111111 111111     212233445567888889


Q ss_pred             Cceeccceee
Q 026217          204 KIVYVEDKAE  213 (241)
Q Consensus       204 ~~~~~~~~~~  213 (241)
                      .+++.....|
T Consensus       143 lik~~~~~~~  152 (154)
T d2gz1a1         143 LVRPTAELKF  152 (154)
T ss_dssp             CCSCCSSCCS
T ss_pred             CCCccceeee
Confidence            9988665433

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.80  E-value=0.013  Score=40.56  Aligned_cols=35  Identities=11%  Similarity=0.073  Sum_probs=30.3

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHH
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKD   87 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~   87 (241)
                      +.+|+|+|| |..|+.++..+++.|+ .|+++.+++.
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            568999997 9999999999999998 5889887643

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.77  E-value=0.032  Score=35.30  Aligned_cols=34  Identities=21%  Similarity=0.194  Sum_probs=30.5

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK   86 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~   86 (241)
                      ..+++|.|| |.+|.-+++.+..+|.+|+++.+.+
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   55 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAG   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCeEEEECC-CccceeeeeeecccccEEEEEEecc
Confidence            478999997 9999999999999999999999764

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=94.75  E-value=0.078  Score=36.31  Aligned_cols=92  Identities=14%  Similarity=0.121  Sum_probs=54.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCC--HHHHHHHHHHcCCCeeecCCCc-----------hhHHHHHHHHCC
Q 026217           54 YVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGS--KDKVDLLKNKFGFDEAFNYKEE-----------PDLDAALKRYFP  119 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~-g~~v~~~~~~--~~~~~~~~~~~g~~~~i~~~~~-----------~~~~~~i~~~~~  119 (241)
                      +|.|.| -|-+|+..++.+... ..+++++...  ......+. ..+.......+..           ..+.+...    
T Consensus         3 KVaING-fGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~----   76 (178)
T d1b7go1           3 NVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAH-RRGIRIYVPQQSIKKFEESGIPVAGTVEDLIK----   76 (178)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHH-HTTCCEECCGGGHHHHHTTTCCCCCCHHHHHH----
T ss_pred             EEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhc-ccCcceeccCccceeccccceecCCchhhhhh----
Confidence            589999 599999999988876 4688887643  22333333 3333211111000           01111111    


Q ss_pred             CCccEEEeCCCc-hhHHHHHHhhccCCEEEEEee
Q 026217          120 EGINIYFENVGG-KMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       120 ~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~  152 (241)
                       ++|+|+||+|. .....+-.++..+-+++..+.
T Consensus        77 -~vDiViecTG~f~~~e~a~~hl~~G~KvIi~~~  109 (178)
T d1b7go1          77 -TSDIVVDTTPNGVGAQYKPIYLQLQRNAIFQGG  109 (178)
T ss_dssp             -HCSEEEECCSTTHHHHHHHHHHHTTCEEEECTT
T ss_pred             -cCCEEEECCCCcCCHHHHHHHHHcCCEEEEECC
Confidence             48999999996 455566666766667766543

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=94.69  E-value=0.023  Score=41.97  Aligned_cols=62  Identities=10%  Similarity=0.225  Sum_probs=38.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      +|||+||+|-+|...+..+...|. ++++.+...       .+    ..|..+...+.+.+++.   ++|+||++++
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~-~v~~~~~~~-------~~----~~Dl~~~~~~~~~i~~~---~~D~Vih~Aa   63 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGN-LIALDVHSK-------EF----CGDFSNPKGVAETVRKL---RPDVIVNAAA   63 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSE-EEEECTTCS-------SS----CCCTTCHHHHHHHHHHH---CCSEEEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-EEEEECCCc-------cc----cCcCCCHHHHHHHHHHc---CCCEEEEecc
Confidence            599999999999998887776664 555553321       11    12333321333334332   5899999986

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=94.59  E-value=0.062  Score=40.53  Aligned_cols=96  Identities=13%  Similarity=0.069  Sum_probs=59.7

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCCe--eecCCCchhHHHHHHHH--CCCCc
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDE--AFNYKEEPDLDAALKRY--FPEGI  122 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~---~g~~~--~i~~~~~~~~~~~i~~~--~~~~~  122 (241)
                      .+|++||=.++  ++|..++.+|+ .+.+|++++.+++..+.+++.   .|.+.  .+..    +..+.++.+  .++.|
T Consensus       144 ~~g~rVLDl~~--gtG~~s~~~a~-g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~----d~~~~~~~~~~~~~~f  216 (318)
T d1wxxa2         144 FRGERALDVFS--YAGGFALHLAL-GFREVVAVDSSAEALRRAEENARLNGLGNVRVLEA----NAFDLLRRLEKEGERF  216 (318)
T ss_dssp             CCEEEEEEETC--TTTHHHHHHHH-HEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEES----CHHHHHHHHHHTTCCE
T ss_pred             hCCCeeeccCC--CCcHHHHHHHh-cCCcEEeecchHHHHHHHHHHHHHcCCCCcceeec----cHHHHhhhhHhhhcCC
Confidence            47889988773  33445556654 356999999999988888743   34432  2222    333333332  22379


Q ss_pred             cEEEe-C--CC--c-----------hhHHHHHHhhccCCEEEEEee
Q 026217          123 NIYFE-N--VG--G-----------KMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       123 d~v~d-~--~g--~-----------~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      |+|+- .  .+  .           +.+..++++|+|||.++....
T Consensus       217 D~Vi~DpP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpGG~Lv~~sc  262 (318)
T d1wxxa2         217 DLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASC  262 (318)
T ss_dssp             EEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             CEEEEcCCccccchHHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence            98873 2  11  1           134567888999999988765

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.57  E-value=0.043  Score=41.25  Aligned_cols=97  Identities=18%  Similarity=0.144  Sum_probs=54.2

Q ss_pred             HHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHH---HHHHHcCCC---eeecCCCchhHHHHH
Q 026217           42 GFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVD---LLKNKFGFD---EAFNYKEEPDLDAAL  114 (241)
Q Consensus        42 ~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~---~~~~~~g~~---~~i~~~~~~~~~~~i  114 (241)
                      |+.+...+.++++||-.|.  |.|..++.+|+ .|+ +|+++..++.-..   ..+ ..+..   .++..+.. ++    
T Consensus        26 ai~~~~~~~~~~~VLDiGc--G~G~lsl~aa~-~Ga~~V~aid~s~~~~~a~~~~~-~~~~~~~i~~~~~~~~-~l----   96 (311)
T d2fyta1          26 FIYQNPHIFKDKVVLDVGC--GTGILSMFAAK-AGAKKVLGVDQSEILYQAMDIIR-LNKLEDTITLIKGKIE-EV----   96 (311)
T ss_dssp             HHHHCGGGTTTCEEEEETC--TTSHHHHHHHH-TTCSEEEEEESSTHHHHHHHHHH-HTTCTTTEEEEESCTT-TS----
T ss_pred             HHHhccccCCcCEEEEECC--CCCHHHHHHHH-cCCCEEEEEeCHHHHHHHHHHHH-HhCCCccceEEEeeHH-Hh----
Confidence            3444446678999999993  36676666565 576 8999998875432   222 33332   22222211 11    


Q ss_pred             HHHCCCCccEEEeC-CC----c-hhH----HHHHHhhccCCEEE
Q 026217          115 KRYFPEGINIYFEN-VG----G-KML----DAVLLNMRIQGRIT  148 (241)
Q Consensus       115 ~~~~~~~~d~v~d~-~g----~-~~~----~~~~~~l~~~G~~v  148 (241)
                       ....+.+|+|+.- .+    . ..+    ...-+.|+|+|+++
T Consensus        97 -~~~~~~~D~Ivse~~~~~~~~e~~~~~~~~a~~~~Lkp~G~ii  139 (311)
T d2fyta1          97 -HLPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY  139 (311)
T ss_dssp             -CCSCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred             -cCccccceEEEEeeeeeecccccccHHHHHHHHhcCCCCcEEe
Confidence             0112379999752 22    1 122    22335789999886

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.52  E-value=0.012  Score=41.92  Aligned_cols=100  Identities=13%  Similarity=0.080  Sum_probs=65.2

Q ss_pred             CCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC--eeecCCCchhHHHHHHHHCCCCccEE
Q 026217           48 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD--EAFNYKEEPDLDAALKRYFPEGINIY  125 (241)
Q Consensus        48 ~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~--~~i~~~~~~~~~~~i~~~~~~~~d~v  125 (241)
                      ...++.+||-.|  .|.|..+..+++..+.+|++++.+++-.+.+++.+...  ..+..... ++.+ + ....+.+|+|
T Consensus        57 ~~~~~~~vLDiG--cG~G~~~~~l~~~~~~~v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~~-d~~~-~-~~~~~~fD~I  131 (222)
T d2ex4a1          57 NKTGTSCALDCG--AGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCC-GLQD-F-TPEPDSYDVI  131 (222)
T ss_dssp             -CCCCSEEEEET--CTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEEC-CGGG-C-CCCSSCEEEE
T ss_pred             CCCCCCEEEEec--cCCCHhhHHHHHhcCCEEEEeecCHHHhhccccccccccccccccccc-cccc-c-cccccccccc
Confidence            456778999998  67888888887777779999999999999988443321  01111111 1111 1 0122379999


Q ss_pred             EeCCC-----c----hhHHHHHHhhccCCEEEEEee
Q 026217          126 FENVG-----G----KMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       126 ~d~~g-----~----~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      +..-.     .    ..+..+.+.|+++|.++....
T Consensus       132 ~~~~~l~h~~~~~~~~~l~~i~~~Lk~~G~~~i~~~  167 (222)
T d2ex4a1         132 WIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDN  167 (222)
T ss_dssp             EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ccccccccchhhhhhhHHHHHHHhcCCcceEEEEEc
Confidence            86332     1    256778889999999988654

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=94.46  E-value=0.045  Score=34.91  Aligned_cols=38  Identities=13%  Similarity=0.183  Sum_probs=33.3

Q ss_pred             CCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 026217           48 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK   86 (241)
Q Consensus        48 ~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~   86 (241)
                      .++++.+++|.|| |.+|.-++..++..|.+|+.+.+++
T Consensus        26 ~~~~~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~   63 (121)
T d1d7ya2          26 GLRPQSRLLIVGG-GVIGLELAATARTAGVHVSLVETQP   63 (121)
T ss_dssp             HCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             hhhcCCeEEEECc-chhHHHHHHHhhcccceEEEEeecc
Confidence            4567899999996 9999999999999999999999764

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=94.46  E-value=0.031  Score=38.45  Aligned_cols=36  Identities=22%  Similarity=0.091  Sum_probs=32.3

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK   86 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~   86 (241)
                      ..+.+|+|.|| |+.|+.+...+...|.+|++..+.+
T Consensus        41 ~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          41 VQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccC
Confidence            45679999996 9999999999999999999999764

>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=94.42  E-value=0.086  Score=39.50  Aligned_cols=98  Identities=14%  Similarity=0.136  Sum_probs=63.2

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCC-CeeecCC-----CchhHHHHHHHHCCCCc
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGF-DEAFNYK-----EEPDLDAALKRYFPEGI  122 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~g~-~~~i~~~-----~~~~~~~~i~~~~~~~~  122 (241)
                      ....+|||.|  ||-|..+-.++++... +|.++...++=.+.+++-+.. ...++..     .. |-.+-+++ .++.+
T Consensus       105 ~~pk~VLIiG--gG~G~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~dprv~i~i~-Da~~~l~~-~~~~y  180 (312)
T d2b2ca1         105 PDPKRVLIIG--GGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCG-DGFEFLKN-HKNEF  180 (312)
T ss_dssp             SSCCEEEEES--CTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECS-CHHHHHHH-CTTCE
T ss_pred             CCCCeEEEeC--CCchHHHHHHHHcCCcceEEEEcccHHHHHHHHhhchhhccccCCCCeEEEEc-hHHHHHHh-CCCCC
Confidence            3456899999  5566667777777765 899999999888888833322 1111111     11 44455554 44589


Q ss_pred             cEEE-eCC---C-------chhHHHHHHhhccCCEEEEEe
Q 026217          123 NIYF-ENV---G-------GKMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       123 d~v~-d~~---g-------~~~~~~~~~~l~~~G~~v~~g  151 (241)
                      |+|+ |..   +       .+.++.+.++|+++|.++.=+
T Consensus       181 DvII~D~~dp~~~~~~L~t~eFy~~~~~~L~~~Gi~v~q~  220 (312)
T d2b2ca1         181 DVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG  220 (312)
T ss_dssp             EEEEECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred             CEEEEcCCCCCCcchhhhhHHHHHHHHhhcCCCcEEEEec
Confidence            9887 322   1       135778889999999998754

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.39  E-value=0.029  Score=42.65  Aligned_cols=33  Identities=15%  Similarity=0.161  Sum_probs=30.1

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG   84 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~   84 (241)
                      -.+|||+||+|-+|...+..+...|.+|+++++
T Consensus        16 ~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~   48 (341)
T d1sb8a_          16 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDN   48 (341)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCcCEEEEEEC
Confidence            357999999999999999999999999999974

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=94.37  E-value=0.067  Score=38.48  Aligned_cols=89  Identities=15%  Similarity=0.089  Sum_probs=57.9

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC-eeecCCCchhHHHHHHHHC-CCCccE
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-EAFNYKEEPDLDAALKRYF-PEGINI  124 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~~i~~~~~~~~~~~i~~~~-~~~~d~  124 (241)
                      .++.+||=.|  -|.|..+..+++ .|.+|++++.|++-++.+++..   |.. .++.-    +    +.+.. ++.||+
T Consensus        36 ~~~~~vLDiG--CG~G~~~~~l~~-~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~----d----~~~~~~~~~fD~  104 (246)
T d1y8ca_          36 LVFDDYLDLA--CGTGNLTENLCP-KFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQ----D----ISNLNINRKFDL  104 (246)
T ss_dssp             CCTTEEEEET--CTTSTTHHHHGG-GSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECC----C----GGGCCCSCCEEE
T ss_pred             CCCCeEEEEe--CcCCHHHHHHHH-hCCccEeeccchhhhhhccccccccCccceeecc----c----hhhhcccccccc
Confidence            3457899988  346777776665 5789999999999888877432   322 22211    1    12222 347999


Q ss_pred             EEeCCCc-----------hhHHHHHHhhccCCEEEE
Q 026217          125 YFENVGG-----------KMLDAVLLNMRIQGRITL  149 (241)
Q Consensus       125 v~d~~g~-----------~~~~~~~~~l~~~G~~v~  149 (241)
                      |+...+.           ..++.+.++|+++|.++.
T Consensus       105 i~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~~i~  140 (246)
T d1y8ca_         105 ITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIF  140 (246)
T ss_dssp             EEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred             cceeeeeeeccCCHHHHHHHHHHHHHhCCCCeEEEE
Confidence            9864321           146778889999999885

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=94.36  E-value=0.02  Score=41.74  Aligned_cols=97  Identities=8%  Similarity=0.043  Sum_probs=59.5

Q ss_pred             CCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCCeeecCCCchhHHHHHHHH-CCCCccE
Q 026217           49 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEPDLDAALKRY-FPEGINI  124 (241)
Q Consensus        49 ~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~~~i~~~~~~~~~~~i~~~-~~~~~d~  124 (241)
                      ++++++||=.|  .|.|..+..+++.-..+|++++.+++..+.+++.+   +...-+..... +...  ... .++.+|+
T Consensus        22 ~~~~~~VLDlG--CG~G~~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~-D~~~--~~~~~~~~fD~   96 (252)
T d1ri5a_          22 TKRGDSVLDLG--CGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQ-DSYG--RHMDLGKEFDV   96 (252)
T ss_dssp             CCTTCEEEEET--CTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEES-CTTT--SCCCCSSCEEE
T ss_pred             CCCcCEEEEec--ccCcHHHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEc-chhh--hcccccccceE
Confidence            57899999998  44466677777765558999999999888887432   22110110000 1000  001 1237999


Q ss_pred             EEeCCCc-----------hhHHHHHHhhccCCEEEEE
Q 026217          125 YFENVGG-----------KMLDAVLLNMRIQGRITLC  150 (241)
Q Consensus       125 v~d~~g~-----------~~~~~~~~~l~~~G~~v~~  150 (241)
                      |+....-           ..+..+.++|++||.++..
T Consensus        97 V~~~~~l~~~~~~~~~~~~~l~~i~~~Lk~gG~~i~~  133 (252)
T d1ri5a_          97 ISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMT  133 (252)
T ss_dssp             EEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred             EEEcceeeecCCCHHHHHHHHHHHhceeCCCCEEEEE
Confidence            9764331           1345677889999998764

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.32  E-value=0.026  Score=37.35  Aligned_cols=88  Identities=14%  Similarity=0.062  Sum_probs=49.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVG---CYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g---~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      +|.|.||+|-+|+-.++++..++   .++..+.++...-+.+.  +...... ..   +.    ....-.++|++|-|.+
T Consensus         4 nVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~--~~~~~~~-~~---~~----~~~~~~~~d~vf~a~p   73 (144)
T d2hjsa1           4 NVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMG--FAESSLR-VG---DV----DSFDFSSVGLAFFAAA   73 (144)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEE--ETTEEEE-CE---EG----GGCCGGGCSEEEECSC
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCccee--eccccch-hc---cc----hhhhhccceEEEecCC
Confidence            58999999999999999997543   47777664422111111  1111100 00   00    0000126999999999


Q ss_pred             chhHHHHHHhhcc-CCEEEEEe
Q 026217          131 GKMLDAVLLNMRI-QGRITLCG  151 (241)
Q Consensus       131 ~~~~~~~~~~l~~-~G~~v~~g  151 (241)
                      .+........+.. +.+++..+
T Consensus        74 ~~~s~~~~~~~~~~g~~VID~S   95 (144)
T d2hjsa1          74 AEVSRAHAERARAAGCSVIDLS   95 (144)
T ss_dssp             HHHHHHHHHHHHHTTCEEEETT
T ss_pred             cchhhhhccccccCCceEEeec
Confidence            7655555554544 55555543

>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Histamine methyltransferase
domain: Histamine methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.27  E-value=0.094  Score=38.50  Aligned_cols=102  Identities=11%  Similarity=0.033  Sum_probs=60.8

Q ss_pred             CCCCCcEEEEEcCCchHHHHHHHHHHHc-----C--CEEEEEeCCHHHHHHHHHHcCCC-----eeecCCCchhH---HH
Q 026217           48 SPKQGEYVFVSAASGAVGQLVGQFAKLV-----G--CYVVGSAGSKDKVDLLKNKFGFD-----EAFNYKEEPDL---DA  112 (241)
Q Consensus        48 ~~~~~~~vlI~ga~g~~G~~avqla~~~-----g--~~v~~~~~~~~~~~~~~~~~g~~-----~~i~~~~~~~~---~~  112 (241)
                      ..++.-+||=.|  .|.|..+..+++.+     +  .++++++.++.-.+.+++.+.-.     ..++.... .+   ..
T Consensus        37 ~~~~~~~VLDiG--cG~G~~~~~ll~~l~~~~~~~~~~~~~vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~  113 (280)
T d1jqea_          37 DTKSEIKILSIG--GGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKISNLENVKFAWHKE-TSSEYQS  113 (280)
T ss_dssp             TTCSEEEEEEET--CTTSHHHHHHHHHHHHHSTTCEEEEEEECCCHHHHHHHHHHHTTCCSCTTEEEEEECS-CHHHHHH
T ss_pred             cCCCCCeEEEEc--CCCCHHHHHHHHHhhhhccCCceEEEEEeCcHHHHHHHHHHHhhccccccccccchhh-hhhhhcc
Confidence            345555788888  45555555554432     3  36889999988888887443321     11222221 22   22


Q ss_pred             HHHHHC-CCCccEEEeCCC-------chhHHHHHHhhccCCEEEEEee
Q 026217          113 ALKRYF-PEGINIYFENVG-------GKMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       113 ~i~~~~-~~~~d~v~d~~g-------~~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      ...... ++.||+|+..-.       ...++.+.++|+++|.++....
T Consensus       114 ~~~~~~~~~~fD~I~~~~~l~~~~d~~~~l~~l~~~LkpgG~l~i~~~  161 (280)
T d1jqea_         114 RMLEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVV  161 (280)
T ss_dssp             HHTTSSSCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             hhcccCCCCceeEEEEccceecCCCHHHHHHHHHhhCCCCCEEEEEEe
Confidence            222222 338999976443       1467889999999998887654

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=94.14  E-value=0.055  Score=34.36  Aligned_cols=45  Identities=16%  Similarity=0.154  Sum_probs=35.1

Q ss_pred             HHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 026217           37 MTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   85 (241)
Q Consensus        37 ~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~   85 (241)
                      .++..++ +. . +..++++|+|| |.+|.-+++.++.+|.+|.++.++
T Consensus        10 ~~s~~~l-~l-~-~~p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~   54 (119)
T d3lada2          10 VDSTGAL-DF-Q-NVPGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAM   54 (119)
T ss_dssp             EEHHHHT-SC-S-SCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             EchhHhh-Cc-c-cCCCeEEEECC-ChHHHHHHHHHHHcCCceEEEEee
Confidence            3555555 22 2 23477999996 999999999999999999999976

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.11  E-value=0.028  Score=37.39  Aligned_cols=33  Identities=15%  Similarity=0.168  Sum_probs=29.6

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG   84 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~   84 (241)
                      .|.+|||.|| |.+|..-+..+...|++|++++.
T Consensus        12 ~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap   44 (150)
T d1kyqa1          12 KDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSP   44 (150)
T ss_dssp             TTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC
Confidence            6789999996 99999999999999999988863

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=94.11  E-value=0.06  Score=39.79  Aligned_cols=96  Identities=15%  Similarity=0.151  Sum_probs=64.9

Q ss_pred             cCCCCCcEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHc---CCCeeecCCCchhHHHHHHHH-CCC
Q 026217           47 CSPKQGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEPDLDAALKRY-FPE  120 (241)
Q Consensus        47 ~~~~~~~~vlI~ga~g~~G~~avqla~~~--g~~v~~~~~~~~~~~~~~~~~---g~~~~i~~~~~~~~~~~i~~~-~~~  120 (241)
                      ..+.++.+||=.|  .|.|..+..+++..  +.+|++++.++.-.+.+++.+   +.+.-+...   +.    .+. .++
T Consensus        23 ~~~~~~~~ILDiG--cG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~---d~----~~~~~~~   93 (281)
T d2gh1a1          23 WKITKPVHIVDYG--CGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEG---DA----TEIELND   93 (281)
T ss_dssp             SCCCSCCEEEEET--CTTTHHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEEES---CT----TTCCCSS
T ss_pred             hccCCcCEEEEec--CcCCHHHHHHHHhCCCCCEEEEEecchhHhhhhhccccccccccccccc---cc----ccccccC
Confidence            3567788899888  45788888888875  569999999999888887443   222111111   11    111 123


Q ss_pred             CccEEEeCCC-----c--hhHHHHHHhhccCCEEEEEe
Q 026217          121 GINIYFENVG-----G--KMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       121 ~~d~v~d~~g-----~--~~~~~~~~~l~~~G~~v~~g  151 (241)
                      .+|+|+....     .  ..++.+.+.|++||.++...
T Consensus        94 ~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~lii~~  131 (281)
T d2gh1a1          94 KYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFE  131 (281)
T ss_dssp             CEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             CceEEEEehhhhcCCCHHHHHHHHHHHcCcCcEEEEEE
Confidence            7999986443     1  35788999999999998765

>d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TRM1-like
domain: N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=94.10  E-value=0.19  Score=38.60  Aligned_cols=94  Identities=19%  Similarity=0.147  Sum_probs=63.2

Q ss_pred             EEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHc---CCCee--------------ecCCCchhHHHHHHHHC
Q 026217           57 VSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKF---GFDEA--------------FNYKEEPDLDAALKRYF  118 (241)
Q Consensus        57 I~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~---g~~~~--------------i~~~~~~~~~~~i~~~~  118 (241)
                      |..+-+++|.-++..++..|+ +|++.+.+++..+.+++.+   +....              +..... +.-..+ ...
T Consensus        49 vLD~~sasG~rsiRya~E~~~~~V~~nDis~~A~~~i~~N~~lN~~~~~~~~~~~~~~~~~~~~~~~~~-Da~~~~-~~~  126 (375)
T d2dula1          49 VLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHD-DANRLM-AER  126 (375)
T ss_dssp             EEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEES-CHHHHH-HHS
T ss_pred             EEEcCCCccHHHHHHHHhCCCCEEEEecCCHHHHHHHHHHHHhcCccccccccccccccccceeEeehh-hhhhhh-Hhh
Confidence            444467888889999998888 8999999999999888432   22110              001111 222222 223


Q ss_pred             CCCccEE-EeCCCc--hhHHHHHHhhccCCEEEEEee
Q 026217          119 PEGINIY-FENVGG--KMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       119 ~~~~d~v-~d~~g~--~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      +..||+| +|.-|+  ..+..+++.++.+|-++....
T Consensus       127 ~~~fDvIDiDPfGs~~pfldsAi~a~~~~Gll~vTaT  163 (375)
T d2dula1         127 HRYFHFIDLDPFGSPMEFLDTALRSAKRRGILGVTAT  163 (375)
T ss_dssp             TTCEEEEEECCSSCCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             cCcCCcccCCCCCCcHHHHHHHHHHhccCCEEEEEec
Confidence            3479966 899885  678899999998888876654

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=94.07  E-value=0.044  Score=34.62  Aligned_cols=34  Identities=24%  Similarity=0.113  Sum_probs=30.1

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK   86 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~   86 (241)
                      .++++|.|| |.+|.-+++.++.+|.+|+++.+.+
T Consensus        21 p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          21 PERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEECC-ChhhHHHHHHhhccccEEEEEeecc
Confidence            367999996 9999999999999999999999763

>d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Bacillus subtilis [TaxId: 1423]

Probab=94.06  E-value=0.44  Score=33.10  Aligned_cols=105  Identities=14%  Similarity=0.128  Sum_probs=66.4

Q ss_pred             HHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HcCCCe--eecCCCchhH
Q 026217           37 MTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKN---KFGFDE--AFNYKEEPDL  110 (241)
Q Consensus        37 ~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~-g~~v~~~~~~~~~~~~~~~---~~g~~~--~i~~~~~~~~  110 (241)
                      -.-|..++.  +  ++..||=+|  .|.|..++.+|+.. ..++++++.++.....+.+   +.|.+.  ++..+.. .+
T Consensus        19 ~~~w~~~F~--~--~~PlvLeIG--cG~G~~~~~lA~~~p~~~~iGiD~~~~~i~~a~~~~~~~~l~Nv~~~~~Da~-~l   91 (204)
T d2fcaa1          19 KGKWNTVFG--N--DNPIHIEVG--TGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDAD-TL   91 (204)
T ss_dssp             TTCHHHHHT--S--CCCEEEEEC--CTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGG-GH
T ss_pred             HhHHHHHcC--C--CCceEEEEE--ecCcHHHHHHHHhCCCCcEEEeecchHHHHHHHHHHHHHhccCchhcccchh-hh
Confidence            334666543  2  344667777  77899999999987 6799999999887766542   455542  2222211 22


Q ss_pred             HHHHHHHCCCCccEEEeCCC---------------chhHHHHHHhhccCCEEEEEe
Q 026217          111 DAALKRYFPEGINIYFENVG---------------GKMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       111 ~~~i~~~~~~~~d~v~d~~g---------------~~~~~~~~~~l~~~G~~v~~g  151 (241)
                         .....++.+|.|+-...               .+.+..+.+.|+|||.+....
T Consensus        92 ---~~~~~~~~~d~v~i~fp~P~~k~~h~k~Rl~~~~~l~~~~r~LkpgG~l~i~T  144 (204)
T d2fcaa1          92 ---TDVFEPGEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT  144 (204)
T ss_dssp             ---HHHCCTTSCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred             ---hcccCchhhhccccccccccchhhhcchhhhHHHHHHHHHHhCCCCcEEEEEE
Confidence               22233447887764322               135678889999999997753

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.06  E-value=0.053  Score=34.61  Aligned_cols=33  Identities=15%  Similarity=0.159  Sum_probs=30.1

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   85 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~   85 (241)
                      ..+++|+|| |.+|.-+++.+..+|.+|+++.++
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~   55 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQ   55 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEec
Confidence            368999996 999999999999999999999975

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.03  E-value=0.032  Score=42.37  Aligned_cols=33  Identities=21%  Similarity=0.324  Sum_probs=29.6

Q ss_pred             EE-EEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 026217           54 YV-FVSAASGAVGQLVGQFAKLVGCYVVGSAGSK   86 (241)
Q Consensus        54 ~v-lI~ga~g~~G~~avqla~~~g~~v~~~~~~~   86 (241)
                      .| ||+||+|-+|..++..+...|++|+++++..
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~   35 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRS   35 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCC
Confidence            36 9999999999999999988999999999753

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=93.96  E-value=0.031  Score=41.25  Aligned_cols=33  Identities=24%  Similarity=0.155  Sum_probs=29.4

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   85 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~   85 (241)
                      +.+|+|+|| |.-|+.+...++..|.+|+++.++
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~   33 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAE   33 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCC
Confidence            467999996 999999999999999999999865

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=93.93  E-value=0.45  Score=32.71  Aligned_cols=105  Identities=15%  Similarity=0.205  Sum_probs=66.1

Q ss_pred             HhcCCCCCcEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHc---CCC-eeecCCCchhHHHHHHHHCC
Q 026217           45 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKF---GFD-EAFNYKEEPDLDAALKRYFP  119 (241)
Q Consensus        45 ~~~~~~~~~~vlI~ga~g~~G~~avqla~~~-g~~v~~~~~~~~~~~~~~~~~---g~~-~~i~~~~~~~~~~~i~~~~~  119 (241)
                      ....+++++.+ |.. +.|.|-.+-.++++. +.+|++++++++..+.+++.+   +.. ..+..+-. ++...+.....
T Consensus        17 ~~l~~~~~~~~-lD~-t~G~Gghs~~il~~~~~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~-~~~~~~~~~~~   93 (192)
T d1m6ya2          17 EFLKPEDEKII-LDC-TVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYR-EADFLLKTLGI   93 (192)
T ss_dssp             HHHCCCTTCEE-EET-TCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGG-GHHHHHHHTTC
T ss_pred             HhhCCCCCCEE-EEe-cCCCcHHHHHHHhcCCCCeEEEeechHHHHHHHHHhhccccccccchhHHHh-hHHHHHHHcCC
Confidence            44577888854 444 355555555666665 669999999999998888443   221 23333333 55555555544


Q ss_pred             CCccEE-EeCCCc---------------hhHHHHHHhhccCCEEEEEee
Q 026217          120 EGINIY-FENVGG---------------KMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       120 ~~~d~v-~d~~g~---------------~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      +.+|.| +|.--+               +.+..+.+.++++|+++.+..
T Consensus        94 ~~vdgIl~DlGvSs~Qld~~~r~~~~~~~~L~~a~~~Lk~gG~l~ii~f  142 (192)
T d1m6ya2          94 EKVDGILMDLGVSTYQLKGENRELENLKEFLKKAEDLLNPGGRIVVISF  142 (192)
T ss_dssp             SCEEEEEEECSCCHHHHHTSHTHHHHHHHHHHHGGGGEEEEEEEEEEES
T ss_pred             CCcceeeeccchhHhhhhhhhccchhHHHHHHHHHHhcCCCCeeeeecc
Confidence            589866 453211               245667778889999988765

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

Probab=93.93  E-value=0.79  Score=33.56  Aligned_cols=105  Identities=12%  Similarity=0.127  Sum_probs=65.4

Q ss_pred             cCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHHcCCCeee-cCC-----------------
Q 026217           47 CSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG---SKDKVDLLKNKFGFDEAF-NYK-----------------  105 (241)
Q Consensus        47 ~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~---~~~~~~~~~~~~g~~~~i-~~~-----------------  105 (241)
                      ..+.++.+|.... +|+.|+++...|+.+|.+++++..   ++.+.+.++ .+|+..++ +..                 
T Consensus        55 g~~~~~~~vv~aS-sGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~-~~GA~v~~v~~~~~~~~a~~~~~~~~~~~  132 (292)
T d2bhsa1          55 GEIKPGDVLIEAT-SGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMR-AYGAELILVTKEQGMEGARDLALEMANRG  132 (292)
T ss_dssp             TSCCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEEEESCCCHHHHHHHH-HTTCEEEEECTTTHHHHHHHHHHHHHHHT
T ss_pred             CCcCCCceeeeec-ccchhHHHHHHHHhcCcceEeeeccCchhhhhHHHH-HhCCCcceeecccchHHHHHHHhhccccc
Confidence            4556677655555 699999999999999997666653   566778888 88875321 111                 


Q ss_pred             ---------Cch-------hHHHHHHHHCCCCccEEEeCCCc-hhHH---HHHHhhccCCEEEEEeee
Q 026217          106 ---------EEP-------DLDAALKRYFPEGINIYFENVGG-KMLD---AVLLNMRIQGRITLCGMI  153 (241)
Q Consensus       106 ---------~~~-------~~~~~i~~~~~~~~d~v~d~~g~-~~~~---~~~~~l~~~G~~v~~g~~  153 (241)
                               ...       ....+|.+-.++.+|.++-++|+ ..+.   ..++...+..+++-+...
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~~a~Ei~~q~~~~~d~vv~~~G~Gg~~~G~~~~~k~~~~~~~i~~Vep~  200 (292)
T d2bhsa1         133 EGKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQPE  200 (292)
T ss_dssp             SSEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEEEEC
T ss_pred             cccccCCCchhcchhhHHHHHHHHhHHhcCCCCCcccccCCCccchhhhhhhhhhccCcceEEEeccc
Confidence                     100       02233333344469999999885 3333   444445567777766543

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=93.86  E-value=0.11  Score=38.21  Aligned_cols=72  Identities=11%  Similarity=0.102  Sum_probs=42.6

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCC-EEEEEe--CCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCC-CccEEEeCCC
Q 026217           55 VFVSAASGAVGQLVGQFAKLVGC-YVVGSA--GSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVG  130 (241)
Q Consensus        55 vlI~ga~g~~G~~avqla~~~g~-~v~~~~--~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~-~~d~v~d~~g  130 (241)
                      |||+||+|-+|..++..+...|. +|++++  .+..+..... ++......+..   ++...+.....- .+++++.+.+
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~aa   77 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV-DLNIADYMDKE---DFLIQIMAGEEFGDVEAIFHEGA   77 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHH-TSCCSEEEEHH---HHHHHHHTTCCCSSCCEEEECCS
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhccc-ccchhhhccch---HHHHHHhhhhcccchhhhhhhcc
Confidence            89999999999999888888897 688875  2222333333 33322222211   333333332222 6788887654

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=93.82  E-value=0.043  Score=35.10  Aligned_cols=35  Identities=20%  Similarity=0.150  Sum_probs=31.3

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK   86 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~   86 (241)
                      ..++++|.|| |-+|+-+++.++.+|.+|+++.+++
T Consensus        24 ~p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~   58 (123)
T d1dxla2          24 IPKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFAS   58 (123)
T ss_dssp             CCSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             cCCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcc
Confidence            4578999996 9999999999999999999999763

>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermus thermophilus [TaxId: 274]

Probab=93.76  E-value=0.17  Score=37.95  Aligned_cols=94  Identities=18%  Similarity=0.194  Sum_probs=61.6

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcC-----C--C---eeecCCCchhHHHHHHHHC
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFG-----F--D---EAFNYKEEPDLDAALKRYF  118 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~g-----~--~---~~i~~~~~~~~~~~i~~~~  118 (241)
                      ...++|||.|  +|.|..+-+++++... +|.++...++=.+.+++.+.     .  +   +++.   . |..+-+++ +
T Consensus        76 ~~pk~VLiiG--~G~G~~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~d~rv~i~~---~-Da~~~l~~-~  148 (312)
T d1uira_          76 PEPKRVLIVG--GGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVI---D-DARAYLER-T  148 (312)
T ss_dssp             SCCCEEEEEE--CTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEE---S-CHHHHHHH-C
T ss_pred             CCcceEEEeC--CCchHHHHHHHhcCCcceEEEecCCHHHHHHHHhcCcccccCccCCCceEEEE---c-hHHHHhhh-c
Confidence            3457899999  4556667777777654 99999999988888874331     1  0   1221   1 44444544 4


Q ss_pred             CCCccEEE-eC---CCc----------hhHHHHHHhhccCCEEEEE
Q 026217          119 PEGINIYF-EN---VGG----------KMLDAVLLNMRIQGRITLC  150 (241)
Q Consensus       119 ~~~~d~v~-d~---~g~----------~~~~~~~~~l~~~G~~v~~  150 (241)
                      ++.+|+|+ |.   .+.          +.++.+.++|+++|.++.=
T Consensus       149 ~~~yDvIi~D~~dp~~~~~~~~~L~t~eF~~~~~~~L~p~Gvlv~~  194 (312)
T d1uira_         149 EERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQ  194 (312)
T ss_dssp             CCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEE
T ss_pred             CCcccEEEEeCCCcccccchhhhhhhHHHHHHHHHhcCCCceEEEe
Confidence            45899886 43   221          2467888999999988753

>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.68  E-value=0.1  Score=38.61  Aligned_cols=95  Identities=13%  Similarity=0.135  Sum_probs=61.9

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcC----C---C--eeecCCCchhHHHHHHHHCC
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFG----F---D--EAFNYKEEPDLDAALKRYFP  119 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~g----~---~--~~i~~~~~~~~~~~i~~~~~  119 (241)
                      ...++|||.|  ||-|..+-.++++.+. +|.++...++=.+.+++-+.    .   .  +++. .   |-..-++. .+
T Consensus        77 ~~pk~vLiiG--gG~G~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~d~rv~i~~-~---Da~~~l~~-~~  149 (285)
T d2o07a1          77 PNPRKVLIIG--GGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHV-G---DGFEFMKQ-NQ  149 (285)
T ss_dssp             SSCCEEEEEE--CTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE-S---CHHHHHHT-CS
T ss_pred             cCcCeEEEeC--CCchHHHHHHHHcCCcceeeeccCCHHHHHHHHhhchhhccccCCCCceEEE-c---cHHHHHhc-CC
Confidence            4457899999  5556667777777665 99999999988888873331    0   1  1211 1   33444443 33


Q ss_pred             CCccEEE-eCCC----------chhHHHHHHhhccCCEEEEEe
Q 026217          120 EGINIYF-ENVG----------GKMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       120 ~~~d~v~-d~~g----------~~~~~~~~~~l~~~G~~v~~g  151 (241)
                      +.+|+|+ |...          .+.++.+.++|+++|.++.=+
T Consensus       150 ~~yDvIi~D~~~p~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~  192 (285)
T d2o07a1         150 DAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG  192 (285)
T ss_dssp             SCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCCCEEEEcCCCCCCcccccccHHHHHHHHHhcCCCCeEEEec
Confidence            4899876 4332          135788899999999988653

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=93.64  E-value=0.062  Score=34.47  Aligned_cols=35  Identities=11%  Similarity=0.133  Sum_probs=31.1

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   85 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~   85 (241)
                      +..++++|.|| |-+|+-+++..+.+|.+|+++.++
T Consensus        24 ~~p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~   58 (125)
T d1ojta2          24 EVPGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMM   58 (125)
T ss_dssp             CCCSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSS
T ss_pred             ccCCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEee
Confidence            34578999996 999999999999999999999875

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.58  E-value=0.19  Score=33.95  Aligned_cols=96  Identities=15%  Similarity=0.107  Sum_probs=64.2

Q ss_pred             hhcCchhHHHHHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchh
Q 026217           30 GILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPD  109 (241)
Q Consensus        30 a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~  109 (241)
                      +-+|+.....+..|.+..---.|.+|+|.|.+.-+|.-+..++...|++|+.......                     +
T Consensus        17 ~~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~---------------------~   75 (170)
T d1a4ia1          17 CFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTA---------------------H   75 (170)
T ss_dssp             CCCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS---------------------S
T ss_pred             CCCCChHHHHHHHHHHhCcccccceEEEEecCCccchHHHHHHHhccCceEEEecccc---------------------c
Confidence            4556666666666644322347899999999999999999999999999998774322                     2


Q ss_pred             HHHHHHHHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEee
Q 026217          110 LDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       110 ~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      +.+.++     ..|+++-++|...+ .--+.++++-.++.+|.
T Consensus        76 l~~~~~-----~aDivi~a~G~~~~-i~~~~vk~g~iviDvgi  112 (170)
T d1a4ia1          76 LDEEVN-----KGDILVVATGQPEM-VKGEWIKPGAIVIDCGI  112 (170)
T ss_dssp             HHHHHT-----TCSEEEECCCCTTC-BCGGGSCTTCEEEECCC
T ss_pred             HHHHHh-----hccchhhccccccc-cccccccCCCeEeccCc
Confidence            222222     37788888875322 11235777777777775

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=93.55  E-value=0.21  Score=32.90  Aligned_cols=39  Identities=21%  Similarity=0.135  Sum_probs=30.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK   93 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~   93 (241)
                      +|.|.| .|.+|+..+.-++..|.+|++..+++++....+
T Consensus         2 kIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~   40 (152)
T d1i36a2           2 RVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTIER   40 (152)
T ss_dssp             EEEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHH
T ss_pred             EEEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHh
Confidence            478889 599999999998889999988876655444333

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=93.55  E-value=0.081  Score=34.26  Aligned_cols=38  Identities=16%  Similarity=0.023  Sum_probs=33.3

Q ss_pred             CCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 026217           48 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK   86 (241)
Q Consensus        48 ~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~   86 (241)
                      .++++.+++|.|| |.+|.-++..++..|.+|.++.+.+
T Consensus        31 ~~~~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~   68 (133)
T d1q1ra2          31 QLIADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAA   68 (133)
T ss_dssp             TCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             hhccCCEEEEECC-chHHHHHHHHHHhhCcceeeeeecc
Confidence            4567889999996 9999999999999999999999763

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.52  E-value=0.056  Score=34.52  Aligned_cols=33  Identities=21%  Similarity=0.067  Sum_probs=29.2

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   85 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~   85 (241)
                      .++++|.|| |.+|.-.++.++.+|.+|.++.++
T Consensus        20 P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          20 PGKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            357999996 999999999999999999999854

>d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Aclacinomycin-10-hydroxylase RdmB
species: Streptomyces purpurascens [TaxId: 1924]

Probab=93.50  E-value=0.029  Score=41.03  Aligned_cols=100  Identities=11%  Similarity=0.100  Sum_probs=62.8

Q ss_pred             HhcCCCCCcEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HcCCCeeecCCCchhHHHHHHHHCCC
Q 026217           45 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYFPE  120 (241)
Q Consensus        45 ~~~~~~~~~~vlI~ga~g~~G~~avqla~~~-g~~v~~~~~~~~~~~~~~~---~~g~~~~i~~~~~~~~~~~i~~~~~~  120 (241)
                      +...+.+..+||=+|  +|.|..+..++++. ++++++++. ++-.+.+++   +.|....+..... ++.    +..+.
T Consensus        75 ~~~d~~~~~~vlDvG--~G~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~~~~~~~~~~ri~~~~~-d~~----~~~p~  146 (256)
T d1qzza2          75 DAYDWSAVRHVLDVG--GGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEG-DFF----KPLPV  146 (256)
T ss_dssp             HTSCCTTCCEEEEET--CTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEEC-CTT----SCCSC
T ss_pred             hcCCCccCCEEEEEC--CCCCHHHHHHHHhhcCcEEEEecC-hHHHHHHHHHHhhcCCcceeeeeee-ecc----ccccc
Confidence            334567778899988  78899999999998 679999995 555555442   2333211111111 111    11123


Q ss_pred             CccEEEeCCC-----c----hhHHHHHHhhccCCEEEEEee
Q 026217          121 GINIYFENVG-----G----KMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       121 ~~d~v~d~~g-----~----~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      ++|+++-.--     .    ..++.+.+.|+|+|+++++..
T Consensus       147 ~~D~v~~~~vLh~~~d~~~~~lL~~i~~~LkpgG~llI~d~  187 (256)
T d1qzza2         147 TADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR  187 (256)
T ss_dssp             CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             cchhhhccccccccCcHHHHHHHHHHHhhcCCcceeEEEEe
Confidence            6888764321     1    246778889999999998764

>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Bacillus subtilis [TaxId: 1423]

Probab=93.49  E-value=0.11  Score=38.13  Aligned_cols=94  Identities=12%  Similarity=0.100  Sum_probs=62.3

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHc----CC--C---eeecCCCchhHHHHHHHHCC
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKF----GF--D---EAFNYKEEPDLDAALKRYFP  119 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~----g~--~---~~i~~~~~~~~~~~i~~~~~  119 (241)
                      ...++|||.|  ||-|..+-.++++.+. +|.++...++=.+.+++-+    +.  +   .++..    |...-+++ ++
T Consensus        74 ~~p~~vLiiG--gG~G~~~~~~l~~~~~~~i~~VEID~~Vi~~a~~~~~~~~~~~~d~r~~i~~~----D~~~~l~~-~~  146 (274)
T d1iy9a_          74 PNPEHVLVVG--GGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVD----DGFMHIAK-SE  146 (274)
T ss_dssp             SSCCEEEEES--CTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEES----CSHHHHHT-CC
T ss_pred             CCcceEEecC--CCCcHHHHHHHhcCCcceEEEecCCHHHHHHHHHhChhhcccccCCCeEEEec----hHHHHHhh-cC
Confidence            4457899999  5666667777777765 9999999998888887333    21  1   12221    33334443 33


Q ss_pred             CCccEEE-eCCC----------chhHHHHHHhhccCCEEEEE
Q 026217          120 EGINIYF-ENVG----------GKMLDAVLLNMRIQGRITLC  150 (241)
Q Consensus       120 ~~~d~v~-d~~g----------~~~~~~~~~~l~~~G~~v~~  150 (241)
                      ..+|+++ |...          .+.++.+.++|+++|.++.=
T Consensus       147 ~~yDvIi~D~~~p~~~~~~L~t~eFy~~~~~~L~~~Gv~v~q  188 (274)
T d1iy9a_         147 NQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQ  188 (274)
T ss_dssp             SCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEE
T ss_pred             CCCCEEEEcCCCCCCcchhhccHHHHHHHHhhcCCCceEEEe
Confidence            4899885 4332          13578899999999998864

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=93.46  E-value=0.055  Score=35.82  Aligned_cols=90  Identities=20%  Similarity=0.125  Sum_probs=48.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc----CCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCC
Q 026217           54 YVFVSAASGAVGQLVGQFAKLV----GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV  129 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~----g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~  129 (241)
                      +|.|.||+|-+|+-.++++...    ...+....++...-.. - .++.+........ +. +.+     .++|++|-|+
T Consensus         2 KVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~-~-~~~~~~~~~~~~~-~~-~~~-----~~~DvvF~al   72 (147)
T d1mb4a1           2 RVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPA-P-NFGKDAGMLHDAF-DI-ESL-----KQLDAVITCQ   72 (147)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBC-C-CSSSCCCBCEETT-CH-HHH-----TTCSEEEECS
T ss_pred             EEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccc-c-ccCCcceeeeccc-ch-hhh-----ccccEEEEec
Confidence            5899999999999999866432    3466666644211110 1 1211111111110 11 112     2599999999


Q ss_pred             CchhHHHHHHhhccCC-E--EEEEee
Q 026217          130 GGKMLDAVLLNMRIQG-R--ITLCGM  152 (241)
Q Consensus       130 g~~~~~~~~~~l~~~G-~--~v~~g~  152 (241)
                      +++........+...| +  ++..+.
T Consensus        73 p~~~s~~~~~~l~~~g~~~~VIDlSs   98 (147)
T d1mb4a1          73 GGSYTEKVYPALRQAGWKGYWIDAAS   98 (147)
T ss_dssp             CHHHHHHHHHHHHHTTCCSEEEESSS
T ss_pred             CchHHHHHhHHHHHcCCceEEEeCCc
Confidence            9866555555555444 3  555443

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.45  E-value=0.034  Score=41.10  Aligned_cols=32  Identities=28%  Similarity=0.268  Sum_probs=28.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK   86 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~   86 (241)
                      .|+|.|| |..|+++...+++.|++|+++.+.+
T Consensus         4 ~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~   35 (292)
T d1k0ia1           4 QVAIIGA-GPSGLLLGQLLHKAGIDNVILERQT   35 (292)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            3899997 9999999999999999999998764

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.38  E-value=0.055  Score=38.69  Aligned_cols=36  Identities=19%  Similarity=0.218  Sum_probs=31.9

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK   86 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~   86 (241)
                      +.+.+|+|.|| |..|+.++..++..|.+|+++..++
T Consensus        47 ~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          47 KNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeecc
Confidence            45689999996 9999999999999999999998764

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=93.37  E-value=0.64  Score=31.17  Aligned_cols=98  Identities=15%  Similarity=0.098  Sum_probs=56.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC--HHHHHHHHHHcCCC-----eeecCCCc--------hh--HHHHHHH
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS--KDKVDLLKNKFGFD-----EAFNYKEE--------PD--LDAALKR  116 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~--~~~~~~~~~~~g~~-----~~i~~~~~--------~~--~~~~i~~  116 (241)
                      +|.|.|- |-+|+++.+.+...+++|+++-..  .+...++. ++...     .-+...+.        -.  -.....+
T Consensus         2 kigINGf-GRIGR~~~R~l~~~~i~iv~INd~~~~~~~ayLl-~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~p~~   79 (168)
T d2g82a1           2 KVGINGF-GRIGRQVFRILHSRGVEVALINDLTDNKTLAHLL-KYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPKE   79 (168)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSCHHHHHHHH-HCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGGG
T ss_pred             EEEEECC-cHHHHHHHHHHhcCCCEEEEECCCcchhhhhhee-ecccccCccccccccccceeEecceeEEEEecCChHH
Confidence            5889995 999999999887778888877743  23444444 32210     00000000        00  0001122


Q ss_pred             HCC-C-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEeee
Q 026217          117 YFP-E-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMI  153 (241)
Q Consensus       117 ~~~-~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~  153 (241)
                      +.. . ++|+|+||+|. .....+..++..+.+=|.++.+
T Consensus        80 i~W~~~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP  119 (168)
T d2g82a1          80 IPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAP  119 (168)
T ss_dssp             CCTGGGTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSC
T ss_pred             CcccccCCceeEeccccccchHHhhhhhccccceeeeccc
Confidence            221 2 79999999995 5556677777777666666553

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=93.36  E-value=0.2  Score=32.82  Aligned_cols=69  Identities=20%  Similarity=0.161  Sum_probs=44.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHcC-CCeeec----CCCchhHHHHHHHHCCCCccEEE
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDKVDLLKNKFG-FDEAFN----YKEEPDLDAALKRYFPEGINIYF  126 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~--~v~~~~~~~~~~~~~~~~~g-~~~~i~----~~~~~~~~~~i~~~~~~~~d~v~  126 (241)
                      .|.|.||+|.+|.....++...+.  +++.++.++.+-+ +. .+. ......    .... +..+.++     +.|+|+
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~-a~-Dl~~~~~~~~~~~~~~~~-~~~~~~~-----~aDivV   73 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGV-AA-DLSHIETRATVKGYLGPE-QLPDCLK-----GCDVVV   73 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHH-HH-HHTTSSSSCEEEEEESGG-GHHHHHT-----TCSEEE
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchh-hH-HHhhhhhhcCCCeEEcCC-ChHHHhC-----CCCEEE
Confidence            589999889999999998888876  7888887654433 33 232 211110    1122 4444453     489998


Q ss_pred             eCCC
Q 026217          127 ENVG  130 (241)
Q Consensus       127 d~~g  130 (241)
                      -+.|
T Consensus        74 itag   77 (144)
T d1mlda1          74 IPAG   77 (144)
T ss_dssp             ECCS
T ss_pred             ECCC
Confidence            8877

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.34  E-value=0.069  Score=34.17  Aligned_cols=32  Identities=9%  Similarity=0.030  Sum_probs=29.7

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   85 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~   85 (241)
                      .+++|.|| |.+|.-+++.++.+|.+|+.+.++
T Consensus        23 k~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~   54 (125)
T d3grsa2          23 GRSVIVGA-GYIAVEMAGILSALGSKTSLMIRH   54 (125)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CEEEEEcC-CccHHHHHHHHhcCCcEEEEEeec
Confidence            68999996 999999999999999999999976

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=93.32  E-value=0.14  Score=36.84  Aligned_cols=32  Identities=16%  Similarity=0.178  Sum_probs=27.7

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeC
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAG   84 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~   84 (241)
                      ..+|+|.|+ |++|..+++.+...|. +++.++.
T Consensus        30 ~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~   62 (247)
T d1jw9b_          30 DSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDF   62 (247)
T ss_dssp             HCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECC
T ss_pred             CCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECC
Confidence            368999995 9999999999999999 7777774

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=93.30  E-value=0.12  Score=37.16  Aligned_cols=35  Identities=20%  Similarity=0.367  Sum_probs=31.3

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   85 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~   85 (241)
                      -.|.+|+|.| -|.+|..+++++...|++|+++..+
T Consensus        29 l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD~   63 (242)
T d1v9la1          29 IEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSDI   63 (242)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeecc
Confidence            4788999999 5999999999999999999988743

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.28  E-value=0.047  Score=41.16  Aligned_cols=91  Identities=22%  Similarity=0.163  Sum_probs=51.4

Q ss_pred             CCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH---HcCCC---eeecCCCchhHHHHHHHHCCC
Q 026217           48 SPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKN---KFGFD---EAFNYKEEPDLDAALKRYFPE  120 (241)
Q Consensus        48 ~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~---~~g~~---~~i~~~~~~~~~~~i~~~~~~  120 (241)
                      .+.+|++||-.|+  |.|.+++.+|+ .|+ +|++++.++. ...+++   ..+..   .++..+.. ++     ....+
T Consensus        30 ~~~~~~~VLDiGc--G~G~ls~~aa~-~Ga~~V~avd~s~~-~~~a~~~~~~n~~~~~v~~~~~~~~-~~-----~~~~~   99 (316)
T d1oria_          30 HLFKDKVVLDVGS--GTGILCMFAAK-AGARKVIGIECSSI-SDYAVKIVKANKLDHVVTIIKGKVE-EV-----ELPVE   99 (316)
T ss_dssp             HHHTTCEEEEETC--TTSHHHHHHHH-TTCSEEEEEECSTT-HHHHHHHHHHTTCTTTEEEEESCTT-TC-----CCSSS
T ss_pred             ccCCcCEEEEEec--CCcHHHHHHHH-hCCCEEEEEcCcHH-HhhhhhHHHHhCCccccceEeccHH-Hc-----ccccc
Confidence            4568999999983  34777665555 676 8999997754 233321   33432   12222111 11     01123


Q ss_pred             CccEEEeC-CC----c-h----hHHHHHHhhccCCEEE
Q 026217          121 GINIYFEN-VG----G-K----MLDAVLLNMRIQGRIT  148 (241)
Q Consensus       121 ~~d~v~d~-~g----~-~----~~~~~~~~l~~~G~~v  148 (241)
                      .+|+++.. .+    . .    .+...-++|+|+|+++
T Consensus       100 ~~D~ivs~~~~~~l~~e~~~~~~l~~~~r~Lkp~G~ii  137 (316)
T d1oria_         100 KVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIF  137 (316)
T ss_dssp             CEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             eeEEEeeeeeeeeeccHHHHHHHHHHHHhcCCCCeEEE
Confidence            79988652 22    1 1    2334557899999886

>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Putative spermidine synthetase PF0127 (SpeE)
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=93.28  E-value=0.21  Score=36.65  Aligned_cols=94  Identities=14%  Similarity=0.068  Sum_probs=59.4

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC---------------eeecCCCchhHHHHH
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD---------------EAFNYKEEPDLDAAL  114 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~---------------~~i~~~~~~~~~~~i  114 (241)
                      .+..+|||.|+  |-|..+-.++++-..+|.++..+++=.+.+++-++..               +++.   . |...-+
T Consensus        71 ~~p~~vLiiG~--G~G~~~~~~l~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~---~-Da~~~l  144 (276)
T d1mjfa_          71 PKPKRVLVIGG--GDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTI---G-DGFEFI  144 (276)
T ss_dssp             SCCCEEEEEEC--TTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEE---S-CHHHHH
T ss_pred             CCCceEEEecC--CchHHHHHHHHhCCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEE---C-hHHHHH
Confidence            45578999994  4455555555544448999999988888888434321               1221   1 333444


Q ss_pred             HHHCCCCccEEE-eCCCc----------hhHHHHHHhhccCCEEEEEe
Q 026217          115 KRYFPEGINIYF-ENVGG----------KMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       115 ~~~~~~~~d~v~-d~~g~----------~~~~~~~~~l~~~G~~v~~g  151 (241)
                      ++  .+++|+|+ |+...          +.++.+.++|+++|.++.=+
T Consensus       145 ~~--~~~yDvIi~D~~~~~~~~~~L~t~eF~~~~~~~L~~~Gv~v~q~  190 (276)
T d1mjfa_         145 KN--NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA  190 (276)
T ss_dssp             HH--CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred             hc--cCCCCEEEEeCCCCCCCcccccCHHHHHhhHhhcCCCceEEEec
Confidence            43  34799875 44421          35788999999999987643

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=93.22  E-value=0.25  Score=33.57  Aligned_cols=89  Identities=11%  Similarity=0.008  Sum_probs=50.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHH---HHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCC
Q 026217           54 YVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLK---NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV  129 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~-g~~v~~~~~~~~~~~~~~---~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~  129 (241)
                      +|.|.||+|-+|+-.++++..+ ..++..+.++...-+.+.   ..+-.+..+...   +..+...     ++|++|-|.
T Consensus         3 kVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~~~~p~~~~~~~~~~~---~~~~~~~-----~~dvvf~a~   74 (176)
T d1vkna1           3 RAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEF---DPEKVSK-----NCDVLFTAL   74 (176)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCC---CHHHHHH-----HCSEEEECC
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCCcccccCchhhcccccccc---CHhHhcc-----ccceEEEcc
Confidence            5899999999999999999887 457777764432212121   011111122222   2222222     399999999


Q ss_pred             CchhHHHHHHhhccCCEEEEEe
Q 026217          130 GGKMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       130 g~~~~~~~~~~l~~~G~~v~~g  151 (241)
                      +........... .+.+++..+
T Consensus        75 p~~~s~~~~~~~-~~~~VIDlS   95 (176)
T d1vkna1          75 PAGASYDLVREL-KGVKIIDLG   95 (176)
T ss_dssp             STTHHHHHHTTC-CSCEEEESS
T ss_pred             ccHHHHHHHHhh-ccceEEecC
Confidence            975544444332 345555544

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=93.16  E-value=0.082  Score=33.21  Aligned_cols=32  Identities=19%  Similarity=0.238  Sum_probs=29.2

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   85 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~   85 (241)
                      ++++|.|| |.+|.-+++.++.+|.+|+++.+.
T Consensus        22 ~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~   53 (115)
T d1lvla2          22 QHLVVVGG-GYIGLELGIAYRKLGAQVSVVEAR   53 (115)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHHTCEEEEECSS
T ss_pred             CeEEEECC-CHHHHHHHHHHhhcccceEEEeee
Confidence            78999996 999999999999999999999865

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=93.12  E-value=0.027  Score=39.34  Aligned_cols=33  Identities=12%  Similarity=-0.148  Sum_probs=24.8

Q ss_pred             CCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEE
Q 026217           49 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGS   82 (241)
Q Consensus        49 ~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~   82 (241)
                      +..++.+++.| .|++|++++|+++.+|++.++.
T Consensus       160 i~~~~~~~i~g-~g~~g~~aiq~a~~~g~~~iia  192 (194)
T d1f8fa1         160 FPFDQLVKFYA-FDEINQAAIDSRKGITLKPIIK  192 (194)
T ss_dssp             CCGGGGEEEEE-GGGHHHHHHHHHHTSCSEEEEE
T ss_pred             CCcccEEEEeC-cHHHHHHHHHHHHHcCCCEEEE
Confidence            34456666656 6999999999999999954443

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=93.05  E-value=0.023  Score=39.05  Aligned_cols=25  Identities=28%  Similarity=0.226  Sum_probs=20.0

Q ss_pred             CCccceEEeecC--CceeeecCCCCCcc
Q 026217            1 MTGWEEYSLVTA--PRLFKIQHTDMPLS   26 (241)
Q Consensus         1 ~G~~ae~~~v~~--~~~~~i~P~~~~~~   26 (241)
                      .|+|+||+++|.  .+++++ |++++..
T Consensus       117 ~G~~aEy~~vp~a~~~l~~i-P~~~~~~  143 (177)
T d1jqba1         117 DGVFGEYFHVNDADMNLAIL-PKDVDLS  143 (177)
T ss_dssp             CCSSBSSEEESSHHHHCEEC-CTTSCGG
T ss_pred             ChhcCeeEEEEhhhCeEEEC-CCCcchH
Confidence            389999999986  369999 9985443

>d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase, INMT {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arylamine N-methyltransferase
domain: Indolethylamine N-methyltransferase, INMT
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.83  E-value=0.034  Score=40.28  Aligned_cols=46  Identities=13%  Similarity=-0.127  Sum_probs=32.7

Q ss_pred             CCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH
Q 026217           48 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK   95 (241)
Q Consensus        48 ~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~   95 (241)
                      ...+|.+||=+|. | .|..+..+++..+.+|++++.++...+.+++.
T Consensus        48 ~~~~g~~vLDlGc-G-~G~~~~~~~~~~~~~v~giD~S~~~i~~a~~~   93 (257)
T d2a14a1          48 GGLQGDTLIDIGS-G-PTIYQVLAACDSFQDITLSDFTDRNREELEKW   93 (257)
T ss_dssp             TSCCEEEEEESSC-T-TCCGGGTTGGGTEEEEEEEESCHHHHHHHHHH
T ss_pred             cCCCCCEEEEECC-C-CCHhHHHHhccccCcEEEecCCHHHHHHHHHH
Confidence            4567888998883 3 45544455554444899999999999888744

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=92.79  E-value=0.8  Score=30.27  Aligned_cols=86  Identities=10%  Similarity=0.025  Sum_probs=53.5

Q ss_pred             EEEEEcCCchHHHH-HHHHHHHc-CCEEEEEe-CCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           54 YVFVSAASGAVGQL-VGQFAKLV-GCYVVGSA-GSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        54 ~vlI~ga~g~~G~~-avqla~~~-g~~v~~~~-~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      +|.|.| +|.+|.- .+...+.. ++++++++ +++++.+.+.+.++.. .++     ++.+.+     ..+|+|+-|+.
T Consensus         3 ri~iIG-~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~~-~~~-----~~~~l~-----~~~D~V~I~tp   70 (164)
T d1tlta1           3 RIGVVG-LGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIP-YAD-----SLSSLA-----ASCDAVFVHSS   70 (164)
T ss_dssp             EEEEEC-CSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCC-BCS-----SHHHHH-----TTCSEEEECSC
T ss_pred             EEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhccccc-ccc-----cchhhh-----hhccccccccc
Confidence            588999 4999964 56666655 67877666 4445555554478764 222     222222     24899999888


Q ss_pred             c-hhHHHHHHhhccCCEEEEEee
Q 026217          131 G-KMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       131 ~-~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      . .+...+..++..+ +=+.+..
T Consensus        71 ~~~h~~~~~~al~~g-k~V~~EK   92 (164)
T d1tlta1          71 TASHFDVVSTLLNAG-VHVCVDK   92 (164)
T ss_dssp             TTHHHHHHHHHHHTT-CEEEEES
T ss_pred             chhcccccccccccc-ceeeccc
Confidence            5 5677777777665 4455543

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=92.78  E-value=0.62  Score=31.30  Aligned_cols=42  Identities=19%  Similarity=0.034  Sum_probs=36.2

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC
Q 026217           55 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF   98 (241)
Q Consensus        55 vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~   98 (241)
                      |.|.| .|.+|...+.-+...|.+|++.++++++.+.+. +.+.
T Consensus         4 IGvIG-lG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~-~~~~   45 (178)
T d1pgja2           4 VGVVG-LGVMGANLALNIAEKGFKVAVFNRTYSKSEEFM-KANA   45 (178)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHH-HHTT
T ss_pred             EEEEe-ehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHH-HcCC
Confidence            77889 599999988888888999999999999999887 4443

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=92.70  E-value=0.11  Score=37.05  Aligned_cols=34  Identities=21%  Similarity=0.120  Sum_probs=29.7

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   85 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~   85 (241)
                      +..+|+|+|| |..|++++..+...|.+|.++.+.
T Consensus         5 ~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~   38 (268)
T d1c0pa1           5 SQKRVVVLGS-GVIGLSSALILARKGYSVHILARD   38 (268)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCC
Confidence            4457999996 999999999999999999999864

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.69  E-value=0.06  Score=40.76  Aligned_cols=92  Identities=22%  Similarity=0.138  Sum_probs=51.3

Q ss_pred             cCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH---HcCCC---eeecCCCchhHHHHHHHHCC
Q 026217           47 CSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKN---KFGFD---EAFNYKEEPDLDAALKRYFP  119 (241)
Q Consensus        47 ~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~---~~g~~---~~i~~~~~~~~~~~i~~~~~  119 (241)
                      ..+.+|.+||-.|.  |.|.+++.+| ..|+ +|+++..++ ..+.+++   ..+..   .++..+.. ++     ...+
T Consensus        34 ~~~~~~~~VLDlGc--GtG~ls~~aa-~~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~-~l-----~~~~  103 (328)
T d1g6q1_          34 KDLFKDKIVLDVGC--GTGILSMFAA-KHGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLE-DV-----HLPF  103 (328)
T ss_dssp             HHHHTTCEEEEETC--TTSHHHHHHH-HTCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTT-TS-----CCSS
T ss_pred             cccCCcCEEEEeCC--CCCHHHHHHH-HhCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehh-hc-----cCcc
Confidence            34568899999983  4566665444 4676 899999775 3333331   34432   12222211 11     1122


Q ss_pred             CCccEEEeCC-C----c-h----hHHHHHHhhccCCEEE
Q 026217          120 EGINIYFENV-G----G-K----MLDAVLLNMRIQGRIT  148 (241)
Q Consensus       120 ~~~d~v~d~~-g----~-~----~~~~~~~~l~~~G~~v  148 (241)
                      +.+|+|+... +    . .    .+...-++|+|+|+++
T Consensus       104 ~~~D~i~se~~~~~~~~e~~~~~~~~a~~r~LkpgG~ii  142 (328)
T d1g6q1_         104 PKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIF  142 (328)
T ss_dssp             SCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             cceeEEEEEecceeeccchhHHHHHHHHHhccCCCeEEE
Confidence            3799887532 1    1 1    2334447899999886

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=92.68  E-value=0.08  Score=39.48  Aligned_cols=36  Identities=19%  Similarity=0.123  Sum_probs=30.6

Q ss_pred             CCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 026217           49 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   85 (241)
Q Consensus        49 ~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~   85 (241)
                      .....+|+|+|| |..|+.+...+...|.+|+++.++
T Consensus        27 ~~~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~   62 (370)
T d2iida1          27 TSNPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEAS   62 (370)
T ss_dssp             CSSCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSS
T ss_pred             CCCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCC
Confidence            344568999996 999999888888889999999865

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.62  E-value=0.25  Score=33.36  Aligned_cols=93  Identities=13%  Similarity=0.054  Sum_probs=58.6

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeee---------cCCCchhHHHHHHHHCCC
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAF---------NYKEEPDLDAALKRYFPE  120 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i---------~~~~~~~~~~~i~~~~~~  120 (241)
                      -.|.+++|.|.+.-+|.=+..++...|+.|+..... ....+.   .+.+..+         .+..+ .+.+..+     
T Consensus        27 l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~lk~~~~-----   96 (171)
T d1edza1          27 LYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN-NIQKFT---RGESLKLNKHHVEDLGEYSED-LLKKCSL-----   96 (171)
T ss_dssp             TTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS-EEEEEE---SCCCSSCCCCEEEEEEECCHH-HHHHHHH-----
T ss_pred             CCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccc-cccccc---cccceeeeeeccccccccchh-HHhhccc-----
Confidence            468899999998899998888888899999876633 111111   1221111         11111 2333333     


Q ss_pred             CccEEEeCCCchhHHHHHHhhccCCEEEEEee
Q 026217          121 GINIYFENVGGKMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       121 ~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      ..|+++.++|...+..--+.+++|..++.+|.
T Consensus        97 ~aDIvIsavG~p~~~i~~d~ik~GavvIDvGi  128 (171)
T d1edza1          97 DSDVVITGVPSENYKFPTEYIKEGAVCINFAC  128 (171)
T ss_dssp             HCSEEEECCCCTTCCBCTTTSCTTEEEEECSS
T ss_pred             cCCEEEEccCCCccccChhhcccCceEeeccc
Confidence            38999999997554333456778778888876

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=92.55  E-value=0.15  Score=38.28  Aligned_cols=99  Identities=15%  Similarity=0.073  Sum_probs=60.9

Q ss_pred             cCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHc---CCC----eeecCCCchhHHHHHHHH-
Q 026217           47 CSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKF---GFD----EAFNYKEEPDLDAALKRY-  117 (241)
Q Consensus        47 ~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~---g~~----~~i~~~~~~~~~~~i~~~-  117 (241)
                      ..+.+|++||=..+  ++|-.++..+ ..|+ .|+.++.++...+.+++.+   |.+    .++..    +..+.++.. 
T Consensus       140 ~~~~~g~~VLdlf~--~~G~~sl~aa-~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~----d~~~~l~~~~  212 (317)
T d2b78a2         140 NGSAAGKTVLNLFS--YTAAFSVAAA-MGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVM----DVFDYFKYAR  212 (317)
T ss_dssp             HTTTBTCEEEEETC--TTTHHHHHHH-HTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEES----CHHHHHHHHH
T ss_pred             HHhhCCCceeecCC--CCcHHHHHHH-hCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEc----cHHHHHHHHH
Confidence            46778999987762  3333334333 4677 8999999998888887543   332    12222    444444433 


Q ss_pred             -CCCCccEEE-eCC--C-c------------hhHHHHHHhhccCCEEEEEee
Q 026217          118 -FPEGINIYF-ENV--G-G------------KMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       118 -~~~~~d~v~-d~~--g-~------------~~~~~~~~~l~~~G~~v~~g~  152 (241)
                       .++.||+|+ |.-  + +            +.+..++++|+++|.++....
T Consensus       213 ~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~L~~~a~~ll~pgG~l~~~sc  264 (317)
T d2b78a2         213 RHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTN  264 (317)
T ss_dssp             HTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             hhcCCCCEEEEcChhhccchhHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence             223799886 321  1 0            245667889999999988655

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=92.52  E-value=0.55  Score=31.52  Aligned_cols=97  Identities=14%  Similarity=0.112  Sum_probs=54.4

Q ss_pred             CCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCC-eeecCCCchhHHHHHHHHCCCCcc
Q 026217           48 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFD-EAFNYKEEPDLDAALKRYFPEGIN  123 (241)
Q Consensus        48 ~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~---~~g~~-~~i~~~~~~~~~~~i~~~~~~~~d  123 (241)
                      .+.+|.+||=.+  +|.|..++. |...|++|+.++.+++..+.+++   .++.. .+...+.  +.........++.||
T Consensus        38 ~~~~g~~vLDl~--~G~G~~~i~-a~~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~~--d~~~~~~~~~~~~fD  112 (171)
T d1ws6a1          38 RYPRRGRFLDPF--AGSGAVGLE-AASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPV--EVFLPEAKAQGERFT  112 (171)
T ss_dssp             HCTTCCEEEEET--CSSCHHHHH-HHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCH--HHHHHHHHHTTCCEE
T ss_pred             cccCCCeEEEec--cccchhhhh-hhhccchhhhcccCHHHHhhhhHHHHhhccccceeeeeh--hcccccccccCCccc
Confidence            467788887766  233333444 34468999999999998877763   34543 3443332  222222233334799


Q ss_pred             EEE-eC---CC-chhHHHHH--HhhccCCEEEE
Q 026217          124 IYF-EN---VG-GKMLDAVL--LNMRIQGRITL  149 (241)
Q Consensus       124 ~v~-d~---~g-~~~~~~~~--~~l~~~G~~v~  149 (241)
                      +|| |.   .+ ...+....  ..++++|.++.
T Consensus       113 ~If~DPPY~~~~~~~l~~l~~~~ll~~~g~ivi  145 (171)
T d1ws6a1         113 VAFMAPPYAMDLAALFGELLASGLVEAGGLYVL  145 (171)
T ss_dssp             EEEECCCTTSCTTHHHHHHHHHTCEEEEEEEEE
T ss_pred             eeEEccccccCHHHHHHHHHHcCCcCCCeEEEE
Confidence            986 42   12 12333333  35777776664

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=92.51  E-value=0.98  Score=30.63  Aligned_cols=103  Identities=16%  Similarity=0.189  Sum_probs=66.0

Q ss_pred             HhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCC--eeecCCCchhHHHHHHHHCCCCc
Q 026217           45 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD--EAFNYKEEPDLDAALKRYFPEGI  122 (241)
Q Consensus        45 ~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~--~~i~~~~~~~~~~~i~~~~~~~~  122 (241)
                      ....+++|.+ .|.+..|+=|+. -.+++. +.+|+++++.++....++ ..-..  ..+..+.. ++.+.+.....+.+
T Consensus        12 ~~l~~~~g~~-~vD~T~G~GGhs-~~iL~~-~~~viaiD~D~~ai~~a~-~~~~~~~~~~~~~f~-~~~~~l~~~~~~~v   86 (182)
T d1wg8a2          12 DLLAVRPGGV-YVDATLGGAGHA-RGILER-GGRVIGLDQDPEAVARAK-GLHLPGLTVVQGNFR-HLKRHLAALGVERV   86 (182)
T ss_dssp             HHHTCCTTCE-EEETTCTTSHHH-HHHHHT-TCEEEEEESCHHHHHHHH-HTCCTTEEEEESCGG-GHHHHHHHTTCSCE
T ss_pred             HhcCCCCCCE-EEEeCCCCcHHH-HHHhcc-cCcEEEEhhhhhHHHHHh-hccccceeEeehHHH-HHHHHHHHcCCCcc
Confidence            3346788885 566655555654 344443 569999999999988888 44322  24444443 56665555544578


Q ss_pred             cEEE-eCCCch---------------hHHHHHHhhccCCEEEEEee
Q 026217          123 NIYF-ENVGGK---------------MLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       123 d~v~-d~~g~~---------------~~~~~~~~l~~~G~~v~~g~  152 (241)
                      |.|+ |.--+.               .+.+..+.++++|+++.+..
T Consensus        87 dgIl~DLGvSs~qld~~~re~~~~~~~L~~~~~~lk~gg~~~ii~f  132 (182)
T d1wg8a2          87 DGILADLGVSSFHLDDPSDELNALKEFLEQAAEVLAPGGRLVVIAF  132 (182)
T ss_dssp             EEEEEECSCCHHHHHCGGTHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             CEEEEEccCCHHHhhcchHHHHHHHHHHHHHHhhhCCCCeEEEEec
Confidence            8664 531111               36777888999999988765

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.35  E-value=0.079  Score=38.47  Aligned_cols=32  Identities=19%  Similarity=0.130  Sum_probs=27.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCH
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSK   86 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~   86 (241)
                      .|+|+|| |..|+++..++++.|. +|.+..+++
T Consensus         3 ~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~   35 (288)
T d3c96a1           3 DILIAGA-GIGGLSCALALHQAGIGKVTLLESSS   35 (288)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence            4899997 9999999999999997 888888753

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=92.31  E-value=0.27  Score=31.41  Aligned_cols=60  Identities=13%  Similarity=0.209  Sum_probs=47.4

Q ss_pred             HhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCCeeecCC
Q 026217           45 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYK  105 (241)
Q Consensus        45 ~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~i~~~  105 (241)
                      +.++++..+.+++.-..-..=+.++++++.+|. ++++.+.+++..+.++ ++|++.++++.
T Consensus        59 ~~~~i~~a~~vv~~t~~d~~N~~~~~~~k~~~~~~iI~~~~~~~~~~~l~-~~G~d~vi~p~  119 (132)
T d1lssa_          59 EDAGIEDADMYIAVTGKEEVNLMSSLLAKSYGINKTIARISEIEYKDVFE-RLGVDVVVSPE  119 (132)
T ss_dssp             HHTTTTTCSEEEECCSCHHHHHHHHHHHHHTTCCCEEEECSSTTHHHHHH-HTTCSEEECHH
T ss_pred             hhcChhhhhhhcccCCcHHHHHHHHHHHHHcCCceEEEEecCHHHHHHHH-HCCCCEEECHH
Confidence            556888888777654445566788889999988 7888888888888888 99999988653

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=92.26  E-value=0.055  Score=40.37  Aligned_cols=33  Identities=18%  Similarity=0.216  Sum_probs=28.6

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   85 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~   85 (241)
                      .+|||+||+|-+|...++.+...|..++++...
T Consensus         3 kkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~   35 (315)
T d1e6ua_           3 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTR   35 (315)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCc
Confidence            479999999999999999998889988777643

>d1euca1 c.2.1.8 (A:1-130) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.24  E-value=0.8  Score=29.02  Aligned_cols=38  Identities=21%  Similarity=0.228  Sum_probs=33.5

Q ss_pred             CCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 026217           48 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   85 (241)
Q Consensus        48 ~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~   85 (241)
                      -+.+..+|+|.|-+|.-|..-.+.++.+|-+|++-+..
T Consensus        11 li~k~TrVivQGiTG~~G~~ht~~m~~YGT~iVaGVtP   48 (130)
T d1euca1          11 YVDKNTKVICQGFTGKQGTFHSQQALEYGTNLVGGTTP   48 (130)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECT
T ss_pred             EEcCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEeecc
Confidence            45778899999999999999999999999999888744

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=92.16  E-value=0.12  Score=32.81  Aligned_cols=35  Identities=11%  Similarity=0.038  Sum_probs=30.6

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   85 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~   85 (241)
                      +.+.+++|.|| |.+|.-+++.+...|.+|+.+.++
T Consensus        30 ~~~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~   64 (122)
T d1xhca2          30 ENSGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRG   64 (122)
T ss_dssp             HHHSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             hcCCcEEEECC-cHHHHHHHHHhhcccceEEEEecc
Confidence            34578999996 999999999999999999999876

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=91.97  E-value=0.12  Score=38.29  Aligned_cols=33  Identities=18%  Similarity=0.177  Sum_probs=30.1

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG   84 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~   84 (241)
                      .|.+|+|.| .|.+|..+++.+...|++|+++..
T Consensus        35 ~gktvaIqG-fGnVG~~~A~~L~e~Gakvv~vsD   67 (293)
T d1hwxa1          35 GDKTFAVQG-FGNVGLHSMRYLHRFGAKCVAVGE   67 (293)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEc
Confidence            578999999 599999999999999999998874

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=91.93  E-value=0.22  Score=36.02  Aligned_cols=34  Identities=21%  Similarity=0.162  Sum_probs=30.5

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG   84 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~   84 (241)
                      -.|.+|+|.| .|.+|..+++.+...|++|+++..
T Consensus        34 l~g~~v~IQG-fGnVG~~~a~~L~e~GakvvavsD   67 (255)
T d1bgva1          34 LVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLSG   67 (255)
T ss_dssp             STTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEEE
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEec
Confidence            3678999999 599999999999999999998864

>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Cystathionine beta-synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.77  E-value=1.9  Score=32.43  Aligned_cols=51  Identities=25%  Similarity=0.346  Sum_probs=39.5

Q ss_pred             cCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHHcCCC
Q 026217           47 CSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG---SKDKVDLLKNKFGFD   99 (241)
Q Consensus        47 ~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~---~~~~~~~~~~~~g~~   99 (241)
                      ..++++..|+... +|+.|.++...|+.+|++.+++..   ++.+.+.++ .+|++
T Consensus        92 g~~~~~~~vv~aS-sGN~g~a~A~~a~~~Gi~~~iv~p~~~~~~k~~~i~-~~GA~  145 (355)
T d1jbqa_          92 GTLKPGDTIIEPT-SGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLR-ALGAE  145 (355)
T ss_dssp             TCSCTTCEEEEEC-SSHHHHHHHHHHHHHTCEEEEEECSCCCHHHHHHHH-HTTCE
T ss_pred             CCcccCceEEEec-ccchhhHHHHHHHhccCCeEEEeeccchHHHHHHHH-hcCCe
Confidence            4456677655544 799999999999999997766663   456888888 99985

>d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine N-methyltransferase, PNMTase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arylamine N-methyltransferase
domain: Phenylethanolamine N-methyltransferase, PNMTase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.72  E-value=0.13  Score=37.40  Aligned_cols=48  Identities=8%  Similarity=-0.197  Sum_probs=34.7

Q ss_pred             CCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC
Q 026217           48 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFG   97 (241)
Q Consensus        48 ~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g   97 (241)
                      +..+|.++|=.|. |+ |...+..+.....+|++++-++...+.+++.+.
T Consensus        51 g~~~g~~vLDiGc-G~-g~~~~~~~~~~~~~v~~~D~S~~~i~~~~~~~~   98 (263)
T d2g72a1          51 GEVSGRTLIDIGS-GP-TVYQLLSACSHFEDITMTDFLEVNRQELGRWLQ   98 (263)
T ss_dssp             SCSCCSEEEEETC-TT-CCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHT
T ss_pred             CCCCCcEEEEecc-CC-CHHHHHHhcccCCeEEEEeCCHHHHHHHHHHHh
Confidence            4567889999994 43 544444455556699999999999999985544

>d1oi7a1 c.2.1.8 (A:1-121) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Thermus thermophilus [TaxId: 274]

Probab=91.68  E-value=0.9  Score=28.41  Aligned_cols=90  Identities=14%  Similarity=0.144  Sum_probs=54.7

Q ss_pred             CCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeC
Q 026217           49 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFEN  128 (241)
Q Consensus        49 ~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~  128 (241)
                      +.+..+|+|.|-+|.-|..-.+.++.+|-+|++-+...+.-...   .|. -++|     ...+.+++ +  ++|.-+-+
T Consensus         4 i~k~trVivQGiTG~~G~~ht~~m~~yGT~iVaGVtPgkgG~~~---~gi-PVf~-----tV~eAv~~-~--~~d~SvIf   71 (121)
T d1oi7a1           4 VNRETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKGGMEV---LGV-PVYD-----TVKEAVAH-H--EVDASIIF   71 (121)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEE---TTE-EEES-----SHHHHHHH-S--CCSEEEEC
T ss_pred             ecCCCcEEEEcCCCcHHHHHHHHHHHhCCceEeeeecCCCCcEE---ECC-chHh-----hHHHHHHh-c--CCeEEEEe
Confidence            45677999999999999999999999999998888442221110   011 1332     33444443 2  36666666


Q ss_pred             CCc-hhHHHHHHhhccCCEEEEE
Q 026217          129 VGG-KMLDAVLLNMRIQGRITLC  150 (241)
Q Consensus       129 ~g~-~~~~~~~~~l~~~G~~v~~  150 (241)
                      +.. .....+++.+..+-+++.+
T Consensus        72 VPp~~a~dAi~EAi~agI~liv~   94 (121)
T d1oi7a1          72 VPAPAAADAALEAAHAGIPLIVL   94 (121)
T ss_dssp             CCHHHHHHHHHHHHHTTCSEEEE
T ss_pred             eCHHHHHHHHHHHHhCCCcEEEE
Confidence            664 3444555555555555443

>d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Possible histamine N-methyltransferase TM1293
species: Thermotoga maritima [TaxId: 2336]

Probab=91.58  E-value=0.15  Score=35.44  Aligned_cols=89  Identities=11%  Similarity=0.083  Sum_probs=57.8

Q ss_pred             CCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeC
Q 026217           49 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFEN  128 (241)
Q Consensus        49 ~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~  128 (241)
                      +.++++||=+|.  |.|..+..+     .++++++.+++..+.++ +-+.. ++..... ++     ...++.+|+|+..
T Consensus        34 ~~~~~~vLDiGc--G~G~~~~~~-----~~~~giD~s~~~~~~a~-~~~~~-~~~~d~~-~l-----~~~~~~fD~I~~~   98 (208)
T d1vlma_          34 LLPEGRGVEIGV--GTGRFAVPL-----KIKIGVEPSERMAEIAR-KRGVF-VLKGTAE-NL-----PLKDESFDFALMV   98 (208)
T ss_dssp             HCCSSCEEEETC--TTSTTHHHH-----TCCEEEESCHHHHHHHH-HTTCE-EEECBTT-BC-----CSCTTCEEEEEEE
T ss_pred             hCCCCeEEEECC--CCccccccc-----ceEEEEeCChhhccccc-ccccc-ccccccc-cc-----ccccccccccccc
Confidence            456778999983  356555444     35789999999999998 55543 2222111 11     0112379999865


Q ss_pred             CC-------chhHHHHHHhhccCCEEEEEee
Q 026217          129 VG-------GKMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       129 ~g-------~~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      -.       ...+..+.+.|+++|+++....
T Consensus        99 ~~l~h~~d~~~~l~~~~~~L~pgG~l~i~~~  129 (208)
T d1vlma_          99 TTICFVDDPERALKEAYRILKKGGYLIVGIV  129 (208)
T ss_dssp             SCGGGSSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             cccccccccccchhhhhhcCCCCceEEEEec
Confidence            43       1357888999999999887654

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.54  E-value=0.13  Score=38.27  Aligned_cols=35  Identities=17%  Similarity=0.149  Sum_probs=30.2

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   85 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~   85 (241)
                      ++..+|+|+|| |.-|+.++..+...|.+|++...+
T Consensus         3 ~~~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~   37 (449)
T d2dw4a2           3 KKTGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEAR   37 (449)
T ss_dssp             SCCCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCCCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCC
Confidence            34567999996 999999999999999999999865

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=91.51  E-value=0.1  Score=35.38  Aligned_cols=29  Identities=14%  Similarity=0.188  Sum_probs=26.4

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeC
Q 026217           55 VFVSAASGAVGQLVGQFAKLVGCYVVGSAG   84 (241)
Q Consensus        55 vlI~ga~g~~G~~avqla~~~g~~v~~~~~   84 (241)
                      |+|+|| |+.|+.+...+.+.|.+|+++.+
T Consensus         4 ViIIGg-GpaGl~AAi~aar~G~~v~iie~   32 (184)
T d1fl2a1           4 VLIVGS-GPAGAAAAIYSARKGIRTGLMGE   32 (184)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEECS
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCeEEEEEE
Confidence            788996 99999999999999999999985

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=91.50  E-value=0.096  Score=37.49  Aligned_cols=31  Identities=23%  Similarity=0.171  Sum_probs=27.1

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 026217           55 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK   86 (241)
Q Consensus        55 vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~   86 (241)
                      |+|+|| |..|+.+...+...|.+|+++.+++
T Consensus         5 ViIIGa-G~aGl~aA~~la~~G~~V~liEk~~   35 (251)
T d2i0za1           5 VIVIGG-GPSGLMAAIGAAEEGANVLLLDKGN   35 (251)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            788896 9999988888888899999999764

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=91.41  E-value=0.35  Score=32.54  Aligned_cols=92  Identities=16%  Similarity=0.178  Sum_probs=59.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHHcCCC----------------------eeecCCCch
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAG---SKDKVDLLKNKFGFD----------------------EAFNYKEEP  108 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~---~~~~~~~~~~~~g~~----------------------~~i~~~~~~  108 (241)
                      +|.|.|- |-+|+++...+...+.+|+++-.   +.+...++. ++--.                      .++..+++ 
T Consensus         2 kIgINGf-GRIGR~~~R~~~~~~~~ivaINd~~~~~~~~~yLl-kyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~p-   78 (169)
T d1dssg1           2 KIGINGF-GRIGRLVLRAALEMGAQVVAVNDPFIALEYMVYMF-KYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKP-   78 (169)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCCEEEEECTTSCHHHHHHHH-HCCTTTCCCSSCEEEETTEEEETTEEEEEECCSSG-
T ss_pred             eEEEECC-cHHHHHHHHHHHhCCCcEEEECCCCcCHHHHHHHH-hcccccCCcCCeEEEeCCEEEECCEEEEEEecCCh-
Confidence            5889994 99999999988888888777764   234555555 43210                      01111111 


Q ss_pred             hHHHHHHHHCC-C-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeec
Q 026217          109 DLDAALKRYFP-E-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMIS  154 (241)
Q Consensus       109 ~~~~~i~~~~~-~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~  154 (241)
                            .++.. + ++|+|+||+|. .....+..++..+.+-|.++.+.
T Consensus        79 ------~~i~W~~~gvD~ViEcTG~f~~~~~~~~hl~~gakkViisaP~  121 (169)
T d1dssg1          79 ------ENIPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVIISAPS  121 (169)
T ss_dssp             ------GGCCHHHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCC
T ss_pred             ------HHCCccccCCCEEEecCceEcCHHHHHHHHhcCCceEeecCCc
Confidence                  11111 2 79999999995 56677778888887777776543

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=91.37  E-value=0.14  Score=38.44  Aligned_cols=34  Identities=18%  Similarity=0.211  Sum_probs=29.7

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK   86 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~   86 (241)
                      ...|+|+|| |..|+.++..+...|.+|.++..++
T Consensus         2 ~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~   35 (314)
T d2bi7a1           2 SKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRD   35 (314)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCC
Confidence            457999996 9999999988888899999999764

>d2nu7a1 c.2.1.8 (A:2-120) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Escherichia coli [TaxId: 562]

Probab=91.36  E-value=0.97  Score=28.17  Aligned_cols=37  Identities=19%  Similarity=0.250  Sum_probs=32.4

Q ss_pred             CCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 026217           49 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   85 (241)
Q Consensus        49 ~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~   85 (241)
                      +.+..+|+|.|-+|.-|..-.+.++.+|-+|++-+..
T Consensus         3 i~k~trVlvQGiTG~~G~~ht~~m~~yGT~vVaGVtP   39 (119)
T d2nu7a1           3 IDKNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTP   39 (119)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECT
T ss_pred             ecCCCcEEEEcCCCcHHHHHHHHHHHhCCceEEEEcc
Confidence            3567899999999999999999999999998888744

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=91.35  E-value=0.2  Score=34.05  Aligned_cols=91  Identities=12%  Similarity=0.130  Sum_probs=50.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCH------HHHHHHHHHc-CC-C-eeecCCCchhHHHHHHHHCCCCcc
Q 026217           54 YVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSK------DKVDLLKNKF-GF-D-EAFNYKEEPDLDAALKRYFPEGIN  123 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~-g~~v~~~~~~~------~~~~~~~~~~-g~-~-~~i~~~~~~~~~~~i~~~~~~~~d  123 (241)
                      +|.|.||+|-+|+-.++++..+ .+++..+..+.      +........+ +. + ......+.        ......+|
T Consensus         3 kVaIiGATGyvG~eLlrlL~~HP~~ei~~l~~~s~~~~aGk~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~d   74 (179)
T d2g17a1           3 NTLIVGASGYAGAELVSYVNRHPHMTITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQPMSDV--------RDFSADVD   74 (179)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTCBHHHHCGGGTTTCCCBEEEESCG--------GGTCTTCC
T ss_pred             EEEEECcccHHHHHHHHHHHhCCCCceEeeEeecccccccccccccccccccccccccccchhh--------hhhhcccc
Confidence            5899999999999999999998 56665543211      1122211011 11 1 01111110        01112699


Q ss_pred             EEEeCCCchhHHHHHHhh-ccCCEEEEEee
Q 026217          124 IYFENVGGKMLDAVLLNM-RIQGRITLCGM  152 (241)
Q Consensus       124 ~v~d~~g~~~~~~~~~~l-~~~G~~v~~g~  152 (241)
                      ++|-|.+..........+ ..+-+++..+.
T Consensus        75 vvf~alp~~~s~~~~~~~~~~~~~vIDlSa  104 (179)
T d2g17a1          75 VVFLATAHEVSHDLAPQFLQAGCVVFDLSG  104 (179)
T ss_dssp             EEEECSCHHHHHHHHHHHHHTTCEEEECSS
T ss_pred             eeeccccchhHHHHhhhhhhcCceeecccc
Confidence            999999975544444444 44556666543

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=91.24  E-value=0.094  Score=37.84  Aligned_cols=32  Identities=22%  Similarity=0.193  Sum_probs=28.2

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 026217           55 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD   87 (241)
Q Consensus        55 vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~   87 (241)
                      |+|+|| |+.|++++..+...|.+|.++.++++
T Consensus         7 ViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~   38 (253)
T d2gqfa1           7 NIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKK   38 (253)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecCCC
Confidence            788896 99999988888889999999998754

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=90.98  E-value=0.11  Score=36.34  Aligned_cols=30  Identities=17%  Similarity=0.139  Sum_probs=26.8

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 026217           55 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   85 (241)
Q Consensus        55 vlI~ga~g~~G~~avqla~~~g~~v~~~~~~   85 (241)
                      |+|+|| |+.|+.+...+.++|.+|+++.+.
T Consensus         6 vvVIGg-GpaGl~aA~~aa~~G~kV~vie~~   35 (221)
T d1dxla1           6 VVIIGG-GPGGYVAAIKAAQLGFKTTCIEKR   35 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEEECS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEEec
Confidence            678896 999999999999999999999864

>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Achromobacter xylosoxidans [TaxId: 85698]

Probab=90.87  E-value=0.93  Score=30.50  Aligned_cols=92  Identities=8%  Similarity=0.038  Sum_probs=56.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc----CCEEEEEeC--CHHHHHHHHHHcCCC----------------------eeecCC
Q 026217           54 YVFVSAASGAVGQLVGQFAKLV----GCYVVGSAG--SKDKVDLLKNKFGFD----------------------EAFNYK  105 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~----g~~v~~~~~--~~~~~~~~~~~~g~~----------------------~~i~~~  105 (241)
                      +|.|.|- |-+|+++...+...    ..+|+++-.  +.+...++. ++.-.                      .++..+
T Consensus         3 kigINGf-GRIGR~v~R~~~~~~~~~~~~vvaINd~~~~~~~ayLl-kyDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~   80 (173)
T d1obfo1           3 RVAINGY-GRIGRNILRAHYEGGKSHDIEIVAINDLGDPKTNAHLT-RYDTAHGKFPGTVSVNGSYMVVNGDKIRVDANR   80 (173)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTSCSSEEEEEEECSSCHHHHHHHH-HEETTTEECSSCEEEETTEEEETTEEEEEECCS
T ss_pred             EEEEECC-cHHHHHHHHHHHhCCCCCCeEEEEEcCCCChHHHHHhh-cccccCCCcCceEEeccceEEECCEEEEEEecC
Confidence            5889994 99999988876542    346776663  334455554 33210                      011111


Q ss_pred             CchhHHHHHHHHC-CC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeec
Q 026217          106 EEPDLDAALKRYF-PE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMIS  154 (241)
Q Consensus       106 ~~~~~~~~i~~~~-~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~  154 (241)
                      +       ..++. ++ ++|+|+||+|. .....+..+|..+.+-|+++.+.
T Consensus        81 ~-------p~~i~W~~~gvDiViEcTG~f~~~~~a~~hl~~GakkViiSAP~  125 (173)
T d1obfo1          81 N-------PAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAPG  125 (173)
T ss_dssp             C-------GGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSCC
T ss_pred             C-------HHHCcccccccceEEEecccccCHHHHHHHhccCCcceEEecCC
Confidence            1       12222 23 89999999995 56667777888887777776643

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=90.79  E-value=0.26  Score=32.53  Aligned_cols=49  Identities=14%  Similarity=0.085  Sum_probs=38.9

Q ss_pred             hHHHHHHHHHhcCCCCCcEEEEEc-CCchHHHHHHHHHHHcCCEEEEEeCCH
Q 026217           36 GMTAYAGFFEVCSPKQGEYVFVSA-ASGAVGQLVGQFAKLVGCYVVGSAGSK   86 (241)
Q Consensus        36 ~~ta~~~l~~~~~~~~~~~vlI~g-a~g~~G~~avqla~~~g~~v~~~~~~~   86 (241)
                      ..|....+ . ....++..++|++ +.|-+|.-+++.+..+|.+|+.+.+.+
T Consensus        25 v~t~~d~l-~-~~~~~~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~   74 (156)
T d1djqa2          25 QLTPEQVM-D-GKKKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH   74 (156)
T ss_dssp             EECHHHHH-H-TCSCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             EECHHHHh-c-CccccCCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Confidence            34677776 3 4677888888873 238899999999999999999999764

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=90.69  E-value=0.83  Score=28.84  Aligned_cols=90  Identities=11%  Similarity=-0.045  Sum_probs=57.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCch-
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGK-  132 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~-  132 (241)
                      .++|.|. |.+|+.+++.++  +.+|+++..++++.+.++ ..|...+. -+.  .-.+.+++..-..++.++-++..+ 
T Consensus         2 HivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~-~~~~~~i~-Gd~--~~~~~L~~a~i~~A~~vi~~~~~d~   74 (129)
T d2fy8a1           2 HVVICGW-SESTLECLRELR--GSEVFVLAEDENVRKKVL-RSGANFVH-GDP--TRVSDLEKANVRGARAVIVNLESDS   74 (129)
T ss_dssp             CEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHHHHHH-HTTCEEEE-SCT--TSHHHHHHTTCTTCSEEEECCSSHH
T ss_pred             EEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHHHHHH-hcCccccc-ccc--CCHHHHHHhhhhcCcEEEEeccchh
Confidence            4788885 999988777664  446777888888888888 77765332 221  223444444334788888888753 


Q ss_pred             ---hHHHHHHhhccCCEEEEE
Q 026217          133 ---MLDAVLLNMRIQGRITLC  150 (241)
Q Consensus       133 ---~~~~~~~~l~~~G~~v~~  150 (241)
                         ......+.+.|..+++..
T Consensus        75 ~n~~~~~~~r~~~~~~~iia~   95 (129)
T d2fy8a1          75 ETIHCILGIRKIDESVRIIAE   95 (129)
T ss_dssp             HHHHHHHHHHHHCSSSCEEEE
T ss_pred             hhHHHHHHHHHHCCCceEEEE
Confidence               233444556666666654

>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermotoga maritima [TaxId: 2336]

Probab=90.65  E-value=0.36  Score=35.75  Aligned_cols=94  Identities=10%  Similarity=0.126  Sum_probs=60.1

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCC------C---eeecCCCchhHHHHHHHHCCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGF------D---EAFNYKEEPDLDAALKRYFPE  120 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~g~------~---~~i~~~~~~~~~~~i~~~~~~  120 (241)
                      ...+|||.|  ||-|..+-.++++.+. +|.++...++=.+.+++-+..      +   +++.   . |..+-+++ .++
T Consensus        89 ~pk~VLiiG--gG~G~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~d~rv~v~~---~-Da~~~l~~-~~~  161 (295)
T d1inla_          89 NPKKVLIIG--GGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVI---A-NGAEYVRK-FKN  161 (295)
T ss_dssp             SCCEEEEEE--CTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE---S-CHHHHGGG-CSS
T ss_pred             CCceEEEec--CCchHHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhhcccccCCCcEEEh---h-hHHHHHhc-CCC
Confidence            346899999  4555666677777765 899999998888888733321      1   1111   1 33444443 334


Q ss_pred             CccEEE-eCCC-----------chhHHHHHHhhccCCEEEEEe
Q 026217          121 GINIYF-ENVG-----------GKMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       121 ~~d~v~-d~~g-----------~~~~~~~~~~l~~~G~~v~~g  151 (241)
                      .+|+++ |+..           .+.++.+.++|+++|.++.=.
T Consensus       162 ~yDvIi~D~~dp~~~~~~~L~t~efy~~~~~~L~~~Gi~v~q~  204 (295)
T d1inla_         162 EFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET  204 (295)
T ss_dssp             CEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCEEEEcCCCCCcCchhhhccHHHHHHHHhhcCCCcEEEEec
Confidence            799886 4321           135778999999999988643

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=90.42  E-value=0.1  Score=39.51  Aligned_cols=31  Identities=13%  Similarity=0.099  Sum_probs=25.0

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCC--EEEEEe
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGC--YVVGSA   83 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~--~v~~~~   83 (241)
                      .+|||+||+|-+|...+..+...|.  +|++.+
T Consensus         3 mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d   35 (346)
T d1oc2a_           3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLD   35 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEe
Confidence            3699999999999998888877776  455554

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=90.35  E-value=0.21  Score=33.38  Aligned_cols=35  Identities=23%  Similarity=0.261  Sum_probs=28.6

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCH
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSK   86 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g--~~v~~~~~~~   86 (241)
                      .|.+|+|.|| |..|..+++.++..+  .+|+++.+.+
T Consensus         1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            4789999997 999998888888876  4788887654

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=90.29  E-value=0.13  Score=38.36  Aligned_cols=32  Identities=22%  Similarity=0.056  Sum_probs=28.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK   86 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~   86 (241)
                      .|+|+|| |..|++++..++..|.+|++..+.+
T Consensus         9 dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~~   40 (298)
T d1w4xa1           9 DVLVVGA-GFSGLYALYRLRELGRSVHVIETAG   40 (298)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEECc-cHHHHHHHHHHHhCCCCEEEEEcCC
Confidence            4899997 9999999999999999999998754

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=90.06  E-value=0.15  Score=36.35  Aligned_cols=31  Identities=19%  Similarity=0.133  Sum_probs=26.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGS   85 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~   85 (241)
                      .|+|+|| |..|+.++..+++.|. +|+++.++
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~   33 (347)
T d1b5qa1           2 RVIVVGA-GMSGISAAKRLSEAGITDLLILEAT   33 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             CEEEECC-cHHHHHHHHHHHhCCCCcEEEEECC
Confidence            3899996 9999999888888997 69998865

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.01  E-value=0.16  Score=35.88  Aligned_cols=31  Identities=16%  Similarity=0.176  Sum_probs=27.0

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 026217           55 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK   86 (241)
Q Consensus        55 vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~   86 (241)
                      |+|+|| |..|+.++..+.+.|.+|.++.+++
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            788895 9999988888888899999999764

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=89.98  E-value=0.15  Score=38.84  Aligned_cols=73  Identities=10%  Similarity=0.152  Sum_probs=42.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCH--HHHHHHHHHcCC-C--e--eecCCCchhHHHHHHHHCCCCccEE
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCY-VVGSAGSK--DKVDLLKNKFGF-D--E--AFNYKEEPDLDAALKRYFPEGINIY  125 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~-v~~~~~~~--~~~~~~~~~~g~-~--~--~i~~~~~~~~~~~i~~~~~~~~d~v  125 (241)
                      +|||+||+|-+|...+..+...|.+ |++++...  .+.+.+. .+.. .  .  ..|-++...+.+.+...   .+|+|
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~l~~~~~~~---~~d~V   77 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLS-DISESNRYNFEHADICDSAEITRIFEQY---QPDAV   77 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGT-TTTTCTTEEEEECCTTCHHHHHHHHHHH---CCSEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHH-hhhhcCCcEEEEccCCCHHHHHHHHHhC---CCCEE
Confidence            5999999999999999988888885 55554321  1112222 2211 1  1  12434431233333322   69999


Q ss_pred             EeCCC
Q 026217          126 FENVG  130 (241)
Q Consensus       126 ~d~~g  130 (241)
                      +.+++
T Consensus        78 ihlAa   82 (361)
T d1kewa_          78 MHLAA   82 (361)
T ss_dssp             EECCS
T ss_pred             EECcc
Confidence            99986

>d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Human(Homo sapiens), liver isoform [TaxId: 9606]

Probab=89.98  E-value=1.2  Score=29.85  Aligned_cols=98  Identities=13%  Similarity=0.114  Sum_probs=58.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEEeC---CHHHHHHHHHHcCCCe--------------eecCCCchhH--HHH
Q 026217           54 YVFVSAASGAVGQLVGQFAKLV-GCYVVGSAG---SKDKVDLLKNKFGFDE--------------AFNYKEEPDL--DAA  113 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~-g~~v~~~~~---~~~~~~~~~~~~g~~~--------------~i~~~~~~~~--~~~  113 (241)
                      +|.|.|- |-+|+++...+... ..+++++-.   +.+...++. ++-..+              +++.+.- .+  ...
T Consensus         3 kIgINGF-GRIGR~v~R~~~~~~~~~ivaINd~~~~~~~~ayLl-kyDS~hG~~~~~v~~~~~~l~i~~~~I-~~~~~~~   79 (169)
T d1u8fo1           3 KVGVNGF-GRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMF-QYDSTHGKFHGTVKAENGKLVINGNPI-TIFQERD   79 (169)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHH-HCCTTTCSCSSCEEEETTEEEETTEEE-EEECCSS
T ss_pred             EEEEECC-cHHHHHHHHHHHHCCCcEEEEecCCCccHHHHHHHH-hhccccCCcCCeEEEECCEEEECCEEE-EEEECCC
Confidence            6899994 99999999877655 568877754   345555665 432100              1110000 00  001


Q ss_pred             HHHHC-CC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeec
Q 026217          114 LKRYF-PE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMIS  154 (241)
Q Consensus       114 i~~~~-~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~  154 (241)
                      ..++. ++ ++|+|+||+|. .....+..++..+.+-+.++.+.
T Consensus        80 p~~i~W~~~~vDiViEcTG~f~~~~~~~~hl~~gakkViiSaP~  123 (169)
T d1u8fo1          80 PSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPS  123 (169)
T ss_dssp             GGGCCTTTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSCC
T ss_pred             hhhCCccccCCCEEEEecceeccHHHHHHHHhcCCceEeecccc
Confidence            12222 13 89999999995 55566667788887777776543

>d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=89.97  E-value=1.4  Score=32.19  Aligned_cols=101  Identities=12%  Similarity=0.186  Sum_probs=58.6

Q ss_pred             hcCCCCCcEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HcCCCe-eecCCCchhHHHHHHHHCCC
Q 026217           46 VCSPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKN---KFGFDE-AFNYKEEPDLDAALKRYFPE  120 (241)
Q Consensus        46 ~~~~~~~~~vlI~ga~g~~G~~avqla~~~-g~~v~~~~~~~~~~~~~~~---~~g~~~-~i~~~~~~~~~~~i~~~~~~  120 (241)
                      ....++|++||=..| ++=|. +.+++... +.+|++.+.++.+...+++   .+|... ++...+. ...   .....+
T Consensus        97 ~L~~~~g~~vLD~CA-aPGgK-t~~la~l~~~~~i~a~d~~~~R~~~l~~~~~r~g~~~~~~~~~~~-~~~---~~~~~~  170 (284)
T d1sqga2          97 WLAPQNGEHILDLCA-APGGK-TTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGR-YPS---QWCGEQ  170 (284)
T ss_dssp             HHCCCTTCEEEEESC-TTCHH-HHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTT-CTH---HHHTTC
T ss_pred             ccCccccceeEeccC-ccccc-hhhhhhhhhhhhhhhhhcchhhhhhHhhhhhcccccceeeecccc-ccc---hhcccc
Confidence            457899999987764 33232 23344333 3589999999888766652   467642 2222221 111   112234


Q ss_pred             CccEEE-e--CCCchh--------------------------HHHHHHhhccCCEEEEEee
Q 026217          121 GINIYF-E--NVGGKM--------------------------LDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       121 ~~d~v~-d--~~g~~~--------------------------~~~~~~~l~~~G~~v~~g~  152 (241)
                      .||.|+ |  |+|...                          +..+++.+++||++|....
T Consensus       171 ~fd~IL~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lk~gG~lvYsTC  231 (284)
T d1sqga2         171 QFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATC  231 (284)
T ss_dssp             CEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEES
T ss_pred             cccEEEEeccccccCccccccchhhccccchhhHHHHHHHHHHHHHHHhcCCCceEEEeee
Confidence            799775 4  666331                          3456667888888876544

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=89.90  E-value=0.12  Score=37.70  Aligned_cols=31  Identities=26%  Similarity=0.185  Sum_probs=27.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   85 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~   85 (241)
                      .|+|+|| |..|+.+...+...|.+|+++.++
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~   32 (347)
T d2ivda1           2 NVAVVGG-GISGLAVAHHLRSRGTDAVLLESS   32 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCEEEEecC
Confidence            3899996 999999999999999999999865

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=89.88  E-value=0.81  Score=30.10  Aligned_cols=38  Identities=21%  Similarity=0.179  Sum_probs=29.8

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHH
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDK   88 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~   88 (241)
                      ++...|.|.|+ |.+|.....++...+. +++..+.++++
T Consensus         5 ~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~   43 (154)
T d1pzga1           5 QRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGM   43 (154)
T ss_dssp             SCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSH
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEecccc
Confidence            45578999997 9999888877777776 88888876543

>d3cmco1 c.2.1.3 (O:0-148,O:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Bacillus stearothermophilus, nca 1503 [TaxId: 1422]

Probab=89.83  E-value=1.8  Score=28.87  Aligned_cols=98  Identities=17%  Similarity=0.122  Sum_probs=54.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCC--HHHHHHHHHHcCCC-------------e-eecCCCc-hhHHHHHH
Q 026217           54 YVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGS--KDKVDLLKNKFGFD-------------E-AFNYKEE-PDLDAALK  115 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~-g~~v~~~~~~--~~~~~~~~~~~g~~-------------~-~i~~~~~-~~~~~~i~  115 (241)
                      +|.|.|- |-+|+++...+... ..+++++-..  .+...++- ++...             . +++-+.- ........
T Consensus         3 kIgINGf-GRIGR~v~R~~l~~~~~~ivaINd~~d~~~~ayll-~yDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~~p~   80 (171)
T d3cmco1           3 KVGINGF-GRIGRNVFRAALKNPDIEVVAVNDLTDANTLAHLL-KYDSVHGRLDAEVSVNGNNLVVNGKEIIVKAERDPE   80 (171)
T ss_dssp             EEEEESC-SHHHHHHHHHHTTCTTEEEEEEECSSCHHHHHHHH-HEETTTEECSSCEEEETTEEEETTEEEEEECCSSGG
T ss_pred             EEEEECC-CHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHhhhh-cccccCCcccccccccCCCEEeCCcceeeEecCCHH
Confidence            5889995 99999988777654 4577777532  23344444 32110             0 0000000 00000112


Q ss_pred             HHCC-C-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEeee
Q 026217          116 RYFP-E-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMI  153 (241)
Q Consensus       116 ~~~~-~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~  153 (241)
                      ++.. . ++|+|+||+|. .....+..++..+.+-|.++.+
T Consensus        81 ~i~W~~~~vDiViEcTG~f~t~~~~~~hl~~gakkViiSap  121 (171)
T d3cmco1          81 NLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISAP  121 (171)
T ss_dssp             GCCTGGGTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSC
T ss_pred             HccccccCCcEEEEecCccCCHHHHHHHHhCCCceEEEecc
Confidence            2211 2 79999999995 5566677778777666666554

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=89.76  E-value=0.095  Score=35.46  Aligned_cols=81  Identities=11%  Similarity=0.149  Sum_probs=51.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCc-
Q 026217           54 YVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG-  131 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~-g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~-  131 (241)
                      +|.|+| .|.+|...+...+.. ++++++++...++.      .....+..+.+   .    ... ...+|+|+.|++. 
T Consensus         5 rvgiiG-~G~ig~~~~~~l~~~~~~elvav~~~~~~~------~~~~~~~~~~~---~----~~~-~~~~D~Vvi~tp~~   69 (170)
T d1f06a1           5 RVAIVG-YGNLGRSVEKLIAKQPDMDLVGIFSRRATL------DTKTPVFDVAD---V----DKH-ADDVDVLFLCMGSA   69 (170)
T ss_dssp             EEEEEC-CSHHHHHHHHHHTTCSSEEEEEEEESSSCC------SSSSCEEEGGG---G----GGT-TTTCSEEEECSCTT
T ss_pred             eEEEEC-ChHHHHHHHHHHHhCCCcEEEEEEeccccc------ccccccccchh---h----hhh-ccccceEEEeCCCc
Confidence            589999 599999888877765 66777766443211      11112222211   1    111 1259999999986 


Q ss_pred             hhHHHHHHhhccCCEEEE
Q 026217          132 KMLDAVLLNMRIQGRITL  149 (241)
Q Consensus       132 ~~~~~~~~~l~~~G~~v~  149 (241)
                      .+...+..++..|-.++.
T Consensus        70 ~h~~~a~~aL~aG~~vv~   87 (170)
T d1f06a1          70 TDIPEQAPKFAQFACTVD   87 (170)
T ss_dssp             THHHHHHHHHTTTSEEEC
T ss_pred             ccHHHHHHHHHCCCcEEE
Confidence            577888888888777664

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=89.72  E-value=0.4  Score=33.21  Aligned_cols=39  Identities=26%  Similarity=0.348  Sum_probs=34.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK   93 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~   93 (241)
                      +|.|+|. |-+|+.++..+...|.+|++.+.++++.+.+.
T Consensus         2 kI~ViGl-G~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln   40 (202)
T d1mv8a2           2 RISIFGL-GYVGAVCAGCLSARGHEVIGVDVSSTKIDLIN   40 (202)
T ss_dssp             EEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             EEEEECC-CHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhc
Confidence            4789995 99999888888888999999999988888776

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=89.51  E-value=0.18  Score=34.05  Aligned_cols=32  Identities=16%  Similarity=0.033  Sum_probs=26.0

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEe
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSA   83 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~   83 (241)
                      .+++|+|.|| |.+|.-++..++++|.++.++.
T Consensus         2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~   33 (185)
T d1q1ra1           2 ANDNVVIVGT-GLAGVEVAFGLRASGWEGNIRL   33 (185)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCCSEEEE
T ss_pred             CCCCEEEECC-cHHHHHHHHHHHHcCCceEEEE
Confidence            4689999996 9999999998999988654443

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=89.51  E-value=1.3  Score=26.51  Aligned_cols=70  Identities=16%  Similarity=0.149  Sum_probs=47.0

Q ss_pred             CCCCcEEEEEcCCchHHHHH-HHHHHHcCCEEEEEeCCH-HHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEE
Q 026217           49 PKQGEYVFVSAASGAVGQLV-GQFAKLVGCYVVGSAGSK-DKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYF  126 (241)
Q Consensus        49 ~~~~~~vlI~ga~g~~G~~a-vqla~~~g~~v~~~~~~~-~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~  126 (241)
                      .+...++.+.|- |++|-.+ +++++..|..|.+.+... ...+.++ +.|......++.. .    +     .+.|.|+
T Consensus         5 ~~~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~-~~Gi~v~~g~~~~-~----i-----~~~d~vV   72 (96)
T d1p3da1           5 MRRVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVTQRLA-QAGAKIYIGHAEE-H----I-----EGASVVV   72 (96)
T ss_dssp             CTTCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHH-HTTCEEEESCCGG-G----G-----TTCSEEE
T ss_pred             chhCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHH-HCCCeEEECCccc-c----C-----CCCCEEE
Confidence            455678999995 8888655 899999999999999763 3556666 7787533322221 1    1     1477776


Q ss_pred             eCCC
Q 026217          127 ENVG  130 (241)
Q Consensus       127 d~~g  130 (241)
                      -+.+
T Consensus        73 ~S~A   76 (96)
T d1p3da1          73 VSSA   76 (96)
T ss_dssp             ECTT
T ss_pred             ECCC
Confidence            6555

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=89.36  E-value=1.7  Score=29.75  Aligned_cols=71  Identities=18%  Similarity=0.181  Sum_probs=44.3

Q ss_pred             HhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCcc
Q 026217           45 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGIN  123 (241)
Q Consensus        45 ~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d  123 (241)
                      ...++ +|.+||=.|. | .|..++. +...|+ +|++++.+++..+.+++......++..    ++    .+ .++.||
T Consensus        43 ~~~dl-~Gk~VLDlGc-G-tG~l~i~-a~~~ga~~V~~vDid~~a~~~ar~N~~~~~~~~~----D~----~~-l~~~fD  109 (197)
T d1ne2a_          43 NDGNI-GGRSVIDAGT-G-NGILACG-SYLLGAESVTAFDIDPDAIETAKRNCGGVNFMVA----DV----SE-ISGKYD  109 (197)
T ss_dssp             HHTSS-BTSEEEEETC-T-TCHHHHH-HHHTTBSEEEEEESCHHHHHHHHHHCTTSEEEEC----CG----GG-CCCCEE
T ss_pred             HcCCC-CCCEEEEeCC-C-CcHHHHH-HHHcCCCcccccccCHHHHHHHHHccccccEEEE----eh----hh-cCCcce
Confidence            34455 5899999883 3 3555544 444665 899999999999999844432233322    21    11 234799


Q ss_pred             EEEeC
Q 026217          124 IYFEN  128 (241)
Q Consensus       124 ~v~d~  128 (241)
                      +|+-.
T Consensus       110 ~Vi~N  114 (197)
T d1ne2a_         110 TWIMN  114 (197)
T ss_dssp             EEEEC
T ss_pred             EEEeC
Confidence            88854

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=89.35  E-value=0.15  Score=37.90  Aligned_cols=31  Identities=13%  Similarity=0.125  Sum_probs=27.5

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 026217           55 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK   86 (241)
Q Consensus        55 vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~   86 (241)
                      |+|+|| |..|+.++..+...|.+|.++..++
T Consensus         4 v~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~   34 (298)
T d1i8ta1           4 YIIVGS-GLFGAVCANELKKLNKKVLVIEKRN   34 (298)
T ss_dssp             EEEECC-SHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred             EEEECC-cHHHHHHHHHHHhCCCcEEEEECCC
Confidence            789996 9999999999888899999999763

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=89.32  E-value=0.22  Score=34.75  Aligned_cols=30  Identities=13%  Similarity=-0.004  Sum_probs=27.0

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 026217           55 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   85 (241)
Q Consensus        55 vlI~ga~g~~G~~avqla~~~g~~v~~~~~~   85 (241)
                      |+|+|| |+.|+.+...+..+|.+|.++.+.
T Consensus         5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~   34 (217)
T d1gesa1           5 YIAIGG-GSGGIASINRAAMYGQKCALIEAK   34 (217)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecc
Confidence            688896 999999999999999999999864

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Archaeal alanine dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=89.27  E-value=0.78  Score=34.24  Aligned_cols=92  Identities=7%  Similarity=-0.050  Sum_probs=59.4

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHc---CCCeeecCCCchhHHHHHHHHCCCCccE
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAKL-VGC-YVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEPDLDAALKRYFPEGINI  124 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~~-~g~-~v~~~~~~~~~~~~~~~~~---g~~~~i~~~~~~~~~~~i~~~~~~~~d~  124 (241)
                      +...++.|.| +|..+..-++..+. ... +|.+..+++++.+.+.+++   +.....      +..+.+.     +.|+
T Consensus       123 ~~~~~l~iiG-aG~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~~~~~~------~~~~a~~-----~aDi  190 (320)
T d1omoa_         123 KNSSVFGFIG-CGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASV------QPAEEAS-----RCDV  190 (320)
T ss_dssp             TTCCEEEEEC-CSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEE------CCHHHHT-----SSSE
T ss_pred             CCccEEEEec-CcccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcCCcccc------chhhhhc-----cccE
Confidence            4557899999 49999876666554 466 8999999988765554333   332221      1122332     5999


Q ss_pred             EEeCCCchhHHHHHHhhccCCEEEEEeee
Q 026217          125 YFENVGGKMLDAVLLNMRIQGRITLCGMI  153 (241)
Q Consensus       125 v~d~~g~~~~~~~~~~l~~~G~~v~~g~~  153 (241)
                      |+-|+.+..--.-.+.++++-.+..+|..
T Consensus       191 V~taT~s~~P~~~~~~l~~G~hv~~iGs~  219 (320)
T d1omoa_         191 LVTTTPSRKPVVKAEWVEEGTHINAIGAD  219 (320)
T ss_dssp             EEECCCCSSCCBCGGGCCTTCEEEECSCC
T ss_pred             EEEeccCcccccchhhcCCCCeEeecCCc
Confidence            99998853111112458888888888874

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=89.16  E-value=0.33  Score=32.07  Aligned_cols=34  Identities=21%  Similarity=-0.008  Sum_probs=27.8

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGS   85 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~   85 (241)
                      -+++|+|+|| |.+|.=++..+.++|+ .|+++.+.
T Consensus        44 ~~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr   78 (153)
T d1gtea3          44 IRGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRK   78 (153)
T ss_dssp             CCSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred             CCCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeC
Confidence            4678999996 9999888888888998 67777764

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=89.10  E-value=0.15  Score=34.90  Aligned_cols=33  Identities=15%  Similarity=0.166  Sum_probs=28.6

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   85 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~   85 (241)
                      +..|+|+|| |+.|+.+...+.+.|.+|+++.+.
T Consensus         5 ~~dVvIIGG-GpaGl~AA~~~ar~g~~v~iie~~   37 (190)
T d1trba1           5 HSKLLILGS-GPAGYTAAVYAARANLQPVLITGM   37 (190)
T ss_dssp             EEEEEEECC-SHHHHHHHHHHHTTTCCCEEECCS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHcCCceEEEEee
Confidence            456899996 999999999999999999998754

>d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=89.05  E-value=0.95  Score=34.68  Aligned_cols=61  Identities=18%  Similarity=0.101  Sum_probs=42.8

Q ss_pred             HHHHHHHHh-cCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHHcCCCe
Q 026217           38 TAYAGFFEV-CSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG---SKDKVDLLKNKFGFDE  100 (241)
Q Consensus        38 ta~~~l~~~-~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~---~~~~~~~~~~~~g~~~  100 (241)
                      .|++.+.+. .+++++.+| |...+|+.|.++...|+.+|.+++++..   ++.+.+.++ .+|++.
T Consensus       129 ~A~~~i~~A~~~~~~g~~V-VeaSSGN~GiAlA~~aa~lGik~~Iv~P~~~~~~K~~~ir-a~GAeV  193 (382)
T d1wkva1         129 PAVEIISRLSRRVEKGSLV-ADATSSNFGVALSAVARLYGYRARVYLPGAAEEFGKLLPR-LLGAQV  193 (382)
T ss_dssp             HHHHHHHHHTTTSCTTCEE-EEECCHHHHHHHHHHHHHTTCEEEEEEETTSCHHHHHHHH-HTTCEE
T ss_pred             HHHHHHHHHHhccCCCCEE-EEeCCcHHHHHHHHHHHHcCCCEEEEeecccccccccccc-ccCcce
Confidence            344445332 246778764 4455799999999999999997666663   446777787 888753

>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=88.99  E-value=0.22  Score=34.87  Aligned_cols=30  Identities=20%  Similarity=0.231  Sum_probs=27.0

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 026217           55 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   85 (241)
Q Consensus        55 vlI~ga~g~~G~~avqla~~~g~~v~~~~~~   85 (241)
                      ++|+|| |+.|+.+...+..+|.+|.++.+.
T Consensus         8 lvVIG~-GpaGl~aA~~aa~~G~~V~liE~~   37 (220)
T d1lvla1           8 LLIIGG-GPGGYVAAIRAGQLGIPTVLVEGQ   37 (220)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEECSS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEecC
Confidence            778896 999999999999999999999854

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=88.93  E-value=0.17  Score=38.08  Aligned_cols=30  Identities=17%  Similarity=0.140  Sum_probs=24.3

Q ss_pred             EEEEcCCchHHHHHHHHHH-----HcCCEEEEEeCC
Q 026217           55 VFVSAASGAVGQLVGQFAK-----LVGCYVVGSAGS   85 (241)
Q Consensus        55 vlI~ga~g~~G~~avqla~-----~~g~~v~~~~~~   85 (241)
                      |+|.|| |..|+++..++.     ..|++|+++.+.
T Consensus        10 V~IvGa-G~aGl~lA~~La~~~~~~~G~~v~vlEr~   44 (360)
T d1pn0a1          10 VLIVGA-GPAGLMAARVLSEYVRQKPDLKVRIIDKR   44 (360)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHhcccccCCCcEEEEcCC
Confidence            789997 999998776653     469999999875

>d1zn7a1 c.61.1.1 (A:3-180) Adenine PRTase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Adenine PRTase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.90  E-value=0.48  Score=32.16  Aligned_cols=35  Identities=17%  Similarity=0.176  Sum_probs=29.7

Q ss_pred             CCCCcEEEEEc---CCchHHHHHHHHHHHcCCEEEEEe
Q 026217           49 PKQGEYVFVSA---ASGAVGQLVGQFAKLVGCYVVGSA   83 (241)
Q Consensus        49 ~~~~~~vlI~g---a~g~~G~~avqla~~~g~~v~~~~   83 (241)
                      +.+|++|+|..   ++|++-.+++++++..|++|+.+.
T Consensus       115 i~~g~rVlIVDDviaTGgT~~a~~~ll~~~Ga~vvg~~  152 (178)
T d1zn7a1         115 LEPGQRVVVVDDLLATGGTMNAACELLGRLQAEVLECV  152 (178)
T ss_dssp             SCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             ccCCCeEEEehhhhhhchHHHHHHHHHHHCCCEEEEEE
Confidence            57899999985   689999999999999999765543

>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=88.85  E-value=0.28  Score=34.16  Aligned_cols=30  Identities=23%  Similarity=0.164  Sum_probs=26.4

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 026217           55 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   85 (241)
Q Consensus        55 vlI~ga~g~~G~~avqla~~~g~~v~~~~~~   85 (241)
                      |+|.|| |+.|+.+...|.+.|.+|.++.+.
T Consensus         6 viVIG~-GpaGl~aA~~aar~G~kV~vIEk~   35 (223)
T d1ebda1           6 TLVVGA-GPGGYVAAIRAAQLGQKVTIVEKG   35 (223)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecC
Confidence            677796 999999999999999999999754

>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=88.77  E-value=0.25  Score=34.84  Aligned_cols=31  Identities=26%  Similarity=0.059  Sum_probs=27.3

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 026217           55 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK   86 (241)
Q Consensus        55 vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~   86 (241)
                      |+|+|| |+.|+.+...+...|.+|.++.+.+
T Consensus         9 viIIG~-GPaGlsaA~~aa~~G~~V~viE~~~   39 (229)
T d1ojta1           9 VVVLGG-GPGGYSAAFAAADEGLKVAIVERYK   39 (229)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCeEEEEeccC
Confidence            678896 9999999999999999999998643

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=88.74  E-value=1.4  Score=25.94  Aligned_cols=65  Identities=15%  Similarity=0.197  Sum_probs=43.7

Q ss_pred             EEEEEcCCchHHHH-HHHHHHHcCCEEEEEeCCH-HHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           54 YVFVSAASGAVGQL-VGQFAKLVGCYVVGSAGSK-DKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        54 ~vlI~ga~g~~G~~-avqla~~~g~~v~~~~~~~-~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      +|-+.|- |++|-. .+++++..|+.|.+.+..+ +..+.++ ..|+.....++.. .+         .+.|+|+-+..
T Consensus         3 ~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~-~~Gi~i~~gh~~~-~i---------~~~d~vV~SsA   69 (89)
T d1j6ua1           3 KIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEETERTAYLR-KLGIPIFVPHSAD-NW---------YDPDLVIKTPA   69 (89)
T ss_dssp             EEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHH-HTTCCEESSCCTT-SC---------CCCSEEEECTT
T ss_pred             EEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHH-HCCCeEEeeeccc-cc---------CCCCEEEEecC
Confidence            4667785 888864 5688899999999999876 3556677 8997643333222 22         24787776655

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=88.67  E-value=0.22  Score=35.97  Aligned_cols=31  Identities=10%  Similarity=0.096  Sum_probs=26.7

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 026217           55 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK   86 (241)
Q Consensus        55 vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~   86 (241)
                      |+|+|| |.+|++++.-+.+.|.+|+++.+.+
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            788896 9999988887888899999999753

>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=88.57  E-value=2  Score=31.78  Aligned_cols=105  Identities=15%  Similarity=0.170  Sum_probs=66.1

Q ss_pred             cCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEe---CCHHHHHHHHHHcCCCeeec--------------------
Q 026217           47 CSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSA---GSKDKVDLLKNKFGFDEAFN--------------------  103 (241)
Q Consensus        47 ~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~---~~~~~~~~~~~~~g~~~~i~--------------------  103 (241)
                      ..++++...+|...+|+.|++....++.+|.+++++.   .++.+.+.++ .+|+..+..                    
T Consensus        59 g~~~~~~~~vv~aSsGN~g~a~A~~a~~~g~~~~iv~p~~~~~~k~~~i~-~~Ga~vi~~~~~~~~~~~~~~~~~~~~~~  137 (320)
T d1z7wa1          59 GLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILL-AFGVELVLTDPAKGMKGAIAKAEEILAKT  137 (320)
T ss_dssp             TSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHH-HTTCEEEEECGGGHHHHHHHHHHHHHHHC
T ss_pred             CCCCCCCceEEeeCCchHHHHHHHHHHhhccceEEeehhhhhhhhhhhhh-ccCcceEEeeccccccccchhHHHHHHhC
Confidence            4566666666666689999999999999999665555   2456778888 888753211                    


Q ss_pred             --------CCCch-------hHHHHHHHHCCCCccEEEeCCCc-hhHH---HHHHhhccCCEEEEEee
Q 026217          104 --------YKEEP-------DLDAALKRYFPEGINIYFENVGG-KMLD---AVLLNMRIQGRITLCGM  152 (241)
Q Consensus       104 --------~~~~~-------~~~~~i~~~~~~~~d~v~d~~g~-~~~~---~~~~~l~~~G~~v~~g~  152 (241)
                              +.+..       ....+|.+-..+.+|.++-++|+ ..+.   ..+....+.-+++-+..
T Consensus       138 ~~~~~~~~~~~~~n~~~g~~t~~~EI~~q~~~~~D~vv~~vGgGg~~~Gi~~~~k~~~~~~~~igve~  205 (320)
T d1z7wa1         138 PNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVEP  205 (320)
T ss_dssp             TTEEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred             CCceecccccccchHHHhhhhHHHHHHHhccCCCCEEEeCCCCCcccchhhhhhhhhhcceeeecccc
Confidence                    01100       12234444444578999999985 4433   33344556677766544

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.31  E-value=0.24  Score=34.75  Aligned_cols=30  Identities=17%  Similarity=0.194  Sum_probs=26.3

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 026217           55 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   85 (241)
Q Consensus        55 vlI~ga~g~~G~~avqla~~~g~~v~~~~~~   85 (241)
                      |+|+|| |+-|+.+...+..+|.+|+++...
T Consensus         8 viVIG~-GpAGl~aA~~aa~~G~kV~lie~~   37 (233)
T d1v59a1           8 VVIIGG-GPAGYVAAIKAAQLGFNTACVEKR   37 (233)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEEec
Confidence            678896 999999888888999999999865

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.14  E-value=0.26  Score=36.78  Aligned_cols=30  Identities=23%  Similarity=0.224  Sum_probs=26.6

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 026217           55 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   85 (241)
Q Consensus        55 vlI~ga~g~~G~~avqla~~~g~~v~~~~~~   85 (241)
                      |+|+|| |..|+.++..+++.|.+|+++.++
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~   31 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEAR   31 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecC
Confidence            788896 999999888888999999999864

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=88.14  E-value=0.25  Score=36.51  Aligned_cols=30  Identities=23%  Similarity=0.162  Sum_probs=26.5

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 026217           55 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   85 (241)
Q Consensus        55 vlI~ga~g~~G~~avqla~~~g~~v~~~~~~   85 (241)
                      |+|+|+ |..|+.+..-+...|++|+++.+.
T Consensus        19 VlVIG~-G~aGl~aA~~la~~G~~V~lvEK~   48 (308)
T d1y0pa2          19 VVVVGS-GGAGFSAAISATDSGAKVILIEKE   48 (308)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecC
Confidence            788896 999999888888899999999864

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Escherichia coli [TaxId: 562]

Probab=88.09  E-value=1.3  Score=29.53  Aligned_cols=92  Identities=14%  Similarity=0.098  Sum_probs=56.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCH--HHHHHHHHHcCC-------C---------------eeecCCCch
Q 026217           54 YVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSK--DKVDLLKNKFGF-------D---------------EAFNYKEEP  108 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~-g~~v~~~~~~~--~~~~~~~~~~g~-------~---------------~~i~~~~~~  108 (241)
                      +|.|.|- |-+|+++...+... ..+|+++-...  +...++. ++--       +               .++..+++ 
T Consensus         3 kigINGF-GRIGR~v~R~~~~~~~i~ivaINd~~~~~~~ayLl-~yDSvhG~~~~~v~~~~~~l~ing~~I~i~~~~~p-   79 (166)
T d1gado1           3 KVGINGF-GRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYML-KYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDP-   79 (166)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTCSSEEEEEEECSSCHHHHHHHH-HCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSG-
T ss_pred             EEEEECC-cHHHHHHHHHHhhCCCeEEEEEeCCCCHHHHhhhh-eecCCCCCcCCeEEEeCCEEEECCEEEEEEeCCCh-
Confidence            5889995 99999999988776 45777777432  3344444 3211       0               01111111 


Q ss_pred             hHHHHHHHHCC-C-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeec
Q 026217          109 DLDAALKRYFP-E-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMIS  154 (241)
Q Consensus       109 ~~~~~i~~~~~-~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~  154 (241)
                            .++.. . ++|+|+||+|. .....+..++..+.+=|.++.+.
T Consensus        80 ------~~i~W~~~gvDiViEcTG~f~t~~~~~~hl~~gakkViiSaP~  122 (166)
T d1gado1          80 ------ANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPS  122 (166)
T ss_dssp             ------GGGCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCC
T ss_pred             ------HHCCccccCCCEEEEccccccCHHHHHHHhcCCCceEEeeccc
Confidence                  11111 2 79999999995 56666777788887777776544

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=87.98  E-value=0.35  Score=36.93  Aligned_cols=31  Identities=19%  Similarity=0.170  Sum_probs=25.6

Q ss_pred             cEEEEEcCCchHHHHHHH-HHHHcCCEEEEEe
Q 026217           53 EYVFVSAASGAVGQLVGQ-FAKLVGCYVVGSA   83 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avq-la~~~g~~v~~~~   83 (241)
                      -+|||+||+|-+|...+. |++..|.+|++++
T Consensus         3 MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D   34 (383)
T d1gy8a_           3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVD   34 (383)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEe
Confidence            469999999999987665 5566799999986

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=87.91  E-value=0.51  Score=32.25  Aligned_cols=85  Identities=16%  Similarity=0.146  Sum_probs=58.9

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG  130 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  130 (241)
                      .+.+|.|+| .|.+|...+++++.+|.+|++.++..+.        ........  . ++.+.++.     .|++.-+..
T Consensus        43 ~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~--------~~~~~~~~--~-~l~ell~~-----sDii~i~~p  105 (188)
T d1sc6a1          43 RGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIENKL--------PLGNATQV--Q-HLSDLLNM-----SDVVSLHVP  105 (188)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCC--------CCTTCEEC--S-CHHHHHHH-----CSEEEECCC
T ss_pred             cceEEEEee-cccchhhhhhhcccccceEeeccccccc--------hhhhhhhh--h-hHHHHHhh-----ccceeeccc
Confidence            577999999 5999999999999999999999864221        11111111  1 45555543     788887765


Q ss_pred             -ch-----hHHHHHHhhccCCEEEEEee
Q 026217          131 -GK-----MLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       131 -~~-----~~~~~~~~l~~~G~~v~~g~  152 (241)
                       ++     .-...++.++++..+|.++.
T Consensus       106 lt~~T~~li~~~~l~~mk~~a~lIN~aR  133 (188)
T d1sc6a1         106 ENPSTKNMMGAKEISLMKPGSLLINASR  133 (188)
T ss_dssp             SSTTTTTCBCHHHHHHSCTTEEEEECSC
T ss_pred             CCcchhhhccHHHHhhCCCCCEEEEcCc
Confidence             21     23577888888888888754

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

Probab=87.88  E-value=0.96  Score=34.05  Aligned_cols=95  Identities=13%  Similarity=0.062  Sum_probs=61.3

Q ss_pred             CCCCcEEEEEcCCchHHHHHHHHH-HHcCC-EEEEEeCCHHHHHHHHHHcCCC--eeecCCCchhHHHHHHHHCCCCccE
Q 026217           49 PKQGEYVFVSAASGAVGQLVGQFA-KLVGC-YVVGSAGSKDKVDLLKNKFGFD--EAFNYKEEPDLDAALKRYFPEGINI  124 (241)
Q Consensus        49 ~~~~~~vlI~ga~g~~G~~avqla-~~~g~-~v~~~~~~~~~~~~~~~~~g~~--~~i~~~~~~~~~~~i~~~~~~~~d~  124 (241)
                      -+...++.|+|+ |..+..-++.. ..++. +|.+..+++++.+.+.+++...  .-+...+  +..+.++     +.|+
T Consensus       125 ~~da~~l~iiG~-G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~~g~~v~~~~--s~~eav~-----~ADI  196 (340)
T d1x7da_         125 RPNARKMALIGN-GAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRAS--SVAEAVK-----GVDI  196 (340)
T ss_dssp             CTTCCEEEEECC-STTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECS--SHHHHHT-----TCSE
T ss_pred             ccCCceEEEEcc-cHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhccCCCceecC--CHHHHHh-----cCCc
Confidence            345678999994 98888766654 45577 8999999988766555355321  1111111  4555554     4899


Q ss_pred             EEeCCCch----hHHHHHHhhccCCEEEEEeee
Q 026217          125 YFENVGGK----MLDAVLLNMRIQGRITLCGMI  153 (241)
Q Consensus       125 v~d~~g~~----~~~~~~~~l~~~G~~v~~g~~  153 (241)
                      ++-|+.+.    .+.  .+.++++-.+..+|..
T Consensus       197 i~t~Tas~s~~Pv~~--~~~l~pG~hI~aiGs~  227 (340)
T d1x7da_         197 ITTVTADKAYATIIT--PDMLEPGMHLNAVGGD  227 (340)
T ss_dssp             EEECCCCSSEEEEEC--GGGCCTTCEEEECSCC
T ss_pred             eeeccccCCCCcccc--hhhcCCCCEEeecccc
Confidence            99877532    222  2468888888888873

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=87.55  E-value=0.97  Score=33.52  Aligned_cols=101  Identities=17%  Similarity=0.095  Sum_probs=58.5

Q ss_pred             CCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCC-eeecCCCchhHHHHHHHHC--CCC
Q 026217           48 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-EAFNYKEEPDLDAALKRYF--PEG  121 (241)
Q Consensus        48 ~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~~i~~~~~~~~~~~i~~~~--~~~  121 (241)
                      ...++.+||=..+  ++|..++.++ ..|++|+.++.++...+.+++.+   |.+ .-+..-.. |..+.++...  +..
T Consensus       129 ~~~~~~rVLdlf~--~tG~~sl~aa-~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~-D~~~~l~~~~~~~~~  204 (309)
T d2igta1         129 TADRPLKVLNLFG--YTGVASLVAA-AAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICE-DAMKFIQREERRGST  204 (309)
T ss_dssp             HSSSCCEEEEETC--TTCHHHHHHH-HTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECS-CHHHHHHHHHHHTCC
T ss_pred             hccCCCeEEEecC--CCcHHHHHHH-hCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeC-CHHHhHHHHhhcCCC
Confidence            4567888887763  2344445444 46889999999999988888432   332 11111122 4555554432  237


Q ss_pred             ccEEE-eCC--C--c--------h----hHHHHHHhhccCCEEEEEee
Q 026217          122 INIYF-ENV--G--G--------K----MLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       122 ~d~v~-d~~--g--~--------~----~~~~~~~~l~~~G~~v~~g~  152 (241)
                      ||+|+ |.-  +  .        .    .+..+..++.++|.++.+..
T Consensus       205 fD~IilDPP~f~~~~~~~~~~~~~~~~~l~~~~~~ll~~~g~~ll~t~  252 (309)
T d2igta1         205 YDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTA  252 (309)
T ss_dssp             BSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEE
T ss_pred             CCEEEECCCcccccccchhHHHHHHHHHHHHHHHHhcCCCCCEEEEec
Confidence            99886 311  1  0        1    23456677888887666544

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=87.53  E-value=0.43  Score=31.22  Aligned_cols=36  Identities=25%  Similarity=0.159  Sum_probs=28.8

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHH
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDK   88 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~g~--~v~~~~~~~~~   88 (241)
                      ...|.|.|+ |.+|...+..+...|.  +++.++..+++
T Consensus         5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~   42 (146)
T d1ez4a1           5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDR   42 (146)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccch
Confidence            457999996 9999988877777664  89999987754

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=87.49  E-value=0.32  Score=33.28  Aligned_cols=32  Identities=9%  Similarity=0.061  Sum_probs=27.0

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   85 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~   85 (241)
                      ..|+|.|| |+.|+.++..+.+.|.+++++.+.
T Consensus         6 ~~VvIIGg-GpaGl~aA~~~ar~g~~v~vie~~   37 (192)
T d1vdca1           6 TRLCIVGS-GPAAHTAAIYAARAELKPLLFEGW   37 (192)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHTTCCCEEECCS
T ss_pred             ceEEEECC-CHHHHHHHHHHHHcCCcEEEEEee
Confidence            46899996 999999888888899998888743

>d2b4ro1 c.2.1.3 (O:4-152,O:319-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=87.39  E-value=1.8  Score=28.82  Aligned_cols=94  Identities=14%  Similarity=0.087  Sum_probs=57.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEEeC---CHHHHHHHHHHcCCC----------------------eeecCCCc
Q 026217           54 YVFVSAASGAVGQLVGQFAKLV-GCYVVGSAG---SKDKVDLLKNKFGFD----------------------EAFNYKEE  107 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~-g~~v~~~~~---~~~~~~~~~~~~g~~----------------------~~i~~~~~  107 (241)
                      +|.|.|= |-+|+++...+... ..+|+++-.   +.+...++- ++.-.                      .++..+++
T Consensus         2 kigINGf-GRIGR~v~R~~~~~~~~~iv~INd~~~d~~~~ayLl-kyDS~hG~~~~~v~~~~~~l~i~~~~I~i~~~~~p   79 (166)
T d2b4ro1           2 KLGINGF-GRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLL-KYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDP   79 (166)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTCSSEEEEEEECTTCCHHHHHHHH-HCCTTTCSCSSCEEEETTEEEESSCEEEEECCSSG
T ss_pred             eEEEECC-CHHHHHHHHHHhhCCCcEEEEECCCCCChHHhhhhh-hcccccccceeeeccCCceEEecCcEEEEEeCCCh
Confidence            5889995 99999999888765 567777763   345566665 43210                      01111111


Q ss_pred             hhHHHHHHHHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeec
Q 026217          108 PDLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMIS  154 (241)
Q Consensus       108 ~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~  154 (241)
                          .++.+ .+.++|+|+||+|. .....+..++..+.+-|.++.+.
T Consensus        80 ----~~i~W-~~~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP~  122 (166)
T d2b4ro1          80 ----SQIPW-GKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPP  122 (166)
T ss_dssp             ----GGCCH-HHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCC
T ss_pred             ----HHccc-cccCCCEEEEecccccchhhhhhhhccCCCEEEEeccc
Confidence                01110 00179999999995 55566777788777777776544

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=87.38  E-value=0.92  Score=29.55  Aligned_cols=60  Identities=12%  Similarity=0.037  Sum_probs=48.1

Q ss_pred             HhcCCCCCcEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHcCCCeeecCC
Q 026217           45 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKNKFGFDEAFNYK  105 (241)
Q Consensus        45 ~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g--~~v~~~~~~~~~~~~~~~~~g~~~~i~~~  105 (241)
                      +.+++...+.+++.-..-..=..++..++.++  .++++.+.+++..+.++ ++|++.++++.
T Consensus        65 ~~a~i~~a~~vi~~~~~d~~n~~~~~~~r~~~~~~~iia~~~~~~~~~~l~-~~Gad~vi~p~  126 (153)
T d1id1a_          65 KKAGIDRCRAILALSDNDADNAFVVLSAKDMSSDVKTVLAVSDSKNLNKIK-MVHPDIILSPQ  126 (153)
T ss_dssp             HHHTTTTCSEEEECSSCHHHHHHHHHHHHHHTSSSCEEEECSSGGGHHHHH-TTCCSEEECHH
T ss_pred             HHhccccCCEEEEccccHHHHHHHHHHHHHhCCCCceEEEEcCHHHHHHHH-HCCCCEEECHH
Confidence            56788888888887655566677888888863  38999998999999999 99999988653

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=87.25  E-value=0.3  Score=35.42  Aligned_cols=30  Identities=23%  Similarity=0.212  Sum_probs=26.2

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 026217           55 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   85 (241)
Q Consensus        55 vlI~ga~g~~G~~avqla~~~g~~v~~~~~~   85 (241)
                      |+|+|| |.+|+.++.-+...|.+|+++.+.
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~   35 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAF   35 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            788896 999998888888889999999864

>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.23  E-value=0.4  Score=33.30  Aligned_cols=30  Identities=17%  Similarity=0.134  Sum_probs=26.5

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 026217           55 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   85 (241)
Q Consensus        55 vlI~ga~g~~G~~avqla~~~g~~v~~~~~~   85 (241)
                      ++|+|| |+.|+.+...+.++|.+|.++...
T Consensus         6 viIIG~-GpaG~~aA~~aar~G~kV~vIEk~   35 (221)
T d3grsa1           6 YLVIGG-GSGGLASARRAAELGARAAVVESH   35 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecc
Confidence            677896 999999999999999999999753

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=87.04  E-value=0.95  Score=32.22  Aligned_cols=35  Identities=20%  Similarity=0.312  Sum_probs=29.0

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHHH-HcCCEEEEEeCC
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFAK-LVGCYVVGSAGS   85 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla~-~~g~~v~~~~~~   85 (241)
                      -.|.+|+|.|- |.+|..+++++. ..|++|+++..+
T Consensus        30 l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vsD~   65 (239)
T d1gtma1          30 LKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVSDS   65 (239)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHhcCcceeecccc
Confidence            36889999995 999999998775 579999888754

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=87.02  E-value=0.69  Score=29.02  Aligned_cols=88  Identities=13%  Similarity=0.034  Sum_probs=48.3

Q ss_pred             CcEEEEEcCCch-----------HHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCC-CchhHHHHHHHHCC
Q 026217           52 GEYVFVSAASGA-----------VGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYK-EEPDLDAALKRYFP  119 (241)
Q Consensus        52 ~~~vlI~ga~g~-----------~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~-~~~~~~~~i~~~~~  119 (241)
                      ..+|||.|+ |+           .+..++.-+|..|.+++.+..+++....-- . -+|+++-.. ..+.+.+.++.   
T Consensus         4 ~kkvlViGs-Gp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~-d-~aD~lYfeplt~e~v~~Ii~~---   77 (121)
T d1a9xa4           4 REKIMVLGG-GPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDY-D-TSDRLYFEPVTLEDVLEIVRI---   77 (121)
T ss_dssp             SCEEEEECC-CSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTST-T-SSSEEECCCCSHHHHHHHHHH---
T ss_pred             CCEEEEECC-CcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcCh-h-hcCceEEccCCHHHHHHHHHH---
Confidence            468999995 64           233455555667999999998877544211 1 134443222 11122222322   


Q ss_pred             CCccEEEeCCCchhHHHHHHhhccCC
Q 026217          120 EGINIYFENVGGKMLDAVLLNMRIQG  145 (241)
Q Consensus       120 ~~~d~v~d~~g~~~~~~~~~~l~~~G  145 (241)
                      +++|.|+-..|+.....+...|...|
T Consensus        78 E~p~~ii~~~GGQtalnla~~L~~~g  103 (121)
T d1a9xa4          78 EKPKGVIVQYGGQTPLKLARALEAAG  103 (121)
T ss_dssp             HCCSEEECSSSTHHHHTTHHHHHHTT
T ss_pred             hCCCEEEeehhhhhHHHHHHHHHHcC
Confidence            25788888888765444444444444

>d1ebfa1 c.2.1.3 (A:2-150,A:341-359) Homoserine dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Homoserine dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.89  E-value=2.9  Score=27.64  Aligned_cols=88  Identities=15%  Similarity=-0.013  Sum_probs=48.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc--CC--EEEEEeCCHHH---------------HHHHHHHcCCCeeecCCCchhHHHHH
Q 026217           54 YVFVSAASGAVGQLVGQFAKLV--GC--YVVGSAGSKDK---------------VDLLKNKFGFDEAFNYKEEPDLDAAL  114 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~--g~--~v~~~~~~~~~---------------~~~~~~~~g~~~~i~~~~~~~~~~~i  114 (241)
                      .|.|.| .|.+|...+++....  +.  +|.++..+...               .+... ....    ...   +.....
T Consensus         6 ~I~l~G-~G~VG~~l~~~l~~~~~~l~~~v~~i~~s~~~~~~~~g~~~~~~~~~~~~~~-~~~~----~~~---~~~~~~   76 (168)
T d1ebfa1           6 NVAVIG-AGVVGSAFLDQLLAMKSTITYNLVLLAEAERSLISKDFSPLNVGSDWKAALA-ASTT----KTL---PLDDLI   76 (168)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHCCCSSEEEEEEEECSSBEEECSSCSCCSCTTCHHHHHH-TCCC----BCC---CHHHHH
T ss_pred             EEEEEe-CCHHHHHHHHHHHHhHHHhhhheEEEEEeeeeeecccccchHhhhhhhhhhh-hccc----ccc---cHHHHH
Confidence            578888 699999998877654  33  66666643211               11111 1110    011   111111


Q ss_pred             HHHCCC-CccEEEeCCCch-hHHHHHHhhccCCEEEEE
Q 026217          115 KRYFPE-GINIYFENVGGK-MLDAVLLNMRIQGRITLC  150 (241)
Q Consensus       115 ~~~~~~-~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~  150 (241)
                      ...... ..++++||++++ ........+..+-++|+.
T Consensus        77 ~~~~~~~~~~vivd~t~~~~~~~~~~~aL~~G~hVVTA  114 (168)
T d1ebfa1          77 AHLKTSPKPVILVDNTSSAYIAGFYTKFVENGISIATP  114 (168)
T ss_dssp             HHHTTCSSCEEEEECSCCHHHHTTHHHHHHTTCEEECC
T ss_pred             HHhccCCCceEEEEecCChHHHHHHHHHHHcCCeEEec
Confidence            122223 688999999974 444555667777777764

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=86.84  E-value=0.89  Score=32.24  Aligned_cols=34  Identities=26%  Similarity=0.336  Sum_probs=28.5

Q ss_pred             CCCcEEEEEcCCchHHHHHHHHH-HHcCCEEEEEeC
Q 026217           50 KQGEYVFVSAASGAVGQLVGQFA-KLVGCYVVGSAG   84 (241)
Q Consensus        50 ~~~~~vlI~ga~g~~G~~avqla-~~~g~~v~~~~~   84 (241)
                      -++.+|+|.| .|.+|..+++.+ +..|++|+++..
T Consensus        29 l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vsd   63 (234)
T d1b26a1          29 PKKATVAVQG-FGNVGQFAALLISQELGSKVVAVSD   63 (234)
T ss_dssp             TTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEeec
Confidence            3688999999 599999988877 567999998873

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=86.74  E-value=0.67  Score=28.73  Aligned_cols=33  Identities=9%  Similarity=-0.026  Sum_probs=25.8

Q ss_pred             CcEEEEEcCCchHHHHHHHHHHHc---CCEEEEEeCC
Q 026217           52 GEYVFVSAASGAVGQLVGQFAKLV---GCYVVGSAGS   85 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~~avqla~~~---g~~v~~~~~~   85 (241)
                      .++++|.|| |.+|.-+++++..+   |.+|..+.++
T Consensus        18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~   53 (117)
T d1feca2          18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRG   53 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESS
T ss_pred             CCeEEEECC-ChHHHHHHHHhHhhcccccccceeccc
Confidence            478999996 99998777665544   7799998865

>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=86.65  E-value=0.3  Score=36.36  Aligned_cols=30  Identities=30%  Similarity=0.293  Sum_probs=26.5

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 026217           55 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   85 (241)
Q Consensus        55 vlI~ga~g~~G~~avqla~~~g~~v~~~~~~   85 (241)
                      |+|+|+ |..|+.+..-|...|++|+++.+.
T Consensus        22 VvVIGa-G~aGl~AA~~aa~~G~~V~vlEK~   51 (317)
T d1qo8a2          22 VLVVGA-GSAGFNASLAAKKAGANVILVDKA   51 (317)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            788996 999999888888889999999864

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.31  E-value=0.57  Score=36.55  Aligned_cols=31  Identities=23%  Similarity=0.095  Sum_probs=26.8

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeC
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAG   84 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~   84 (241)
                      .+|||.|+ |++|..++..+...|+ ++..++.
T Consensus        38 ~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~   69 (426)
T d1yovb1          38 CKVLVIGA-GGLGCELLKNLALSGFRQIHVIDM   69 (426)
T ss_dssp             CCEEEECS-STTHHHHHHHHHTTTCCCEEEECC
T ss_pred             CeEEEECC-CHHHHHHHHHHHHcCCCeEEEEEC
Confidence            46999996 9999999998888999 7888875

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=86.15  E-value=1.4  Score=27.79  Aligned_cols=89  Identities=13%  Similarity=0.170  Sum_probs=50.2

Q ss_pred             CCcEEEEEcCCch-----------HHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCCeeecCC-CchhHHHHHHHHC
Q 026217           51 QGEYVFVSAASGA-----------VGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYK-EEPDLDAALKRYF  118 (241)
Q Consensus        51 ~~~~vlI~ga~g~-----------~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~-~~~~~~~~i~~~~  118 (241)
                      .-.+|||.|+ |+           .+..++..++..|++++.+..+++....-- .. +|+++-.. ..+++.+.++.  
T Consensus         6 ~~kkvlilGs-Gp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~-d~-aD~lYfePlt~e~v~~Ii~~--   80 (127)
T d1a9xa3           6 DIKSILILGA-GPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDP-EM-ADATYIEPIHWEVVRKIIEK--   80 (127)
T ss_dssp             SCCEEEEECC-CSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCG-GG-SSEEECSCCCHHHHHHHHHH--
T ss_pred             CCCEEEEECC-CcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcCh-hh-cceeeeecCCHHHHHHHHHH--
Confidence            3468999995 54           233445555666999999998887543222 22 34443222 22133333332  


Q ss_pred             CCCccEEEeCCCchhHHHHHHhhccCC
Q 026217          119 PEGINIYFENVGGKMLDAVLLNMRIQG  145 (241)
Q Consensus       119 ~~~~d~v~d~~g~~~~~~~~~~l~~~G  145 (241)
                       +++|.++-..|+.....+..-|...|
T Consensus        81 -E~pd~il~~~GGQtalnla~~L~~~g  106 (127)
T d1a9xa3          81 -ERPDAVLPTMGGQTALNCALELERQG  106 (127)
T ss_dssp             -HCCSEEECSSSHHHHHHHHHHHHHTT
T ss_pred             -hCcCCeEEEeeeehHhHHHHHHHHcC
Confidence             36899999999865444333343333

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=86.13  E-value=0.11  Score=38.87  Aligned_cols=24  Identities=13%  Similarity=0.130  Sum_probs=21.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCC
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGC   77 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~   77 (241)
                      +|||+||+|-+|..+++.+...|.
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~   25 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAY   25 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCC
Confidence            599999999999999998887764

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=86.06  E-value=1.4  Score=27.75  Aligned_cols=60  Identities=18%  Similarity=0.159  Sum_probs=42.2

Q ss_pred             HhcCCCCCcEEEEEcCCc-hHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCCeeecCC
Q 026217           45 EVCSPKQGEYVFVSAASG-AVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYK  105 (241)
Q Consensus        45 ~~~~~~~~~~vlI~ga~g-~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~i~~~  105 (241)
                      ..+++...+.+++.-... ..-.++...++..+. ++++.+.+++..+.++ ++|++++++..
T Consensus        58 ~~a~i~~a~~vi~~~~~~~~~~~~~~~~~~~~~~~~iiar~~~~~~~~~l~-~~Gad~vi~p~  119 (134)
T d2hmva1          58 LSLGIRNFEYVIVAIGANIQASTLTTLLLKELDIPNIWVKAQNYYHHKVLE-KIGADRIIHPE  119 (134)
T ss_dssp             HHHTGGGCSEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCSHHHHHHHH-HHTCSEEECHH
T ss_pred             hccCCccccEEEEEcCchHHhHHHHHHHHHHcCCCcEEeecccHhHHHHHH-HCCCCEEEChH
Confidence            445677777766643333 334455555666776 8999998888999998 99999988654

>d1qb7a_ c.61.1.1 (A:) Adenine PRTase {Leishmania donovani [TaxId: 5661]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Adenine PRTase
species: Leishmania donovani [TaxId: 5661]

Probab=86.06  E-value=0.72  Score=32.79  Aligned_cols=35  Identities=20%  Similarity=0.136  Sum_probs=29.2

Q ss_pred             CCCCcEEEEEc---CCchHHHHHHHHHHHcCCEEEEEe
Q 026217           49 PKQGEYVFVSA---ASGAVGQLVGQFAKLVGCYVVGSA   83 (241)
Q Consensus        49 ~~~~~~vlI~g---a~g~~G~~avqla~~~g~~v~~~~   83 (241)
                      +.+|++|+|..   ++|++-.+++++++..|++|+.+.
T Consensus       135 l~~g~rVlIVDDviaTGgT~~aa~~ll~~~Ga~Vvg~~  172 (236)
T d1qb7a_         135 IGKGSRVVLIDDVLATGGTALSGLQLVEASDAVVVEMV  172 (236)
T ss_dssp             SCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEE
T ss_pred             ccCCceEEEehhhhhccHHHHHHHHHHHHCCCEEEEEE
Confidence            56899998885   689999999999999999755444

>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=85.88  E-value=0.39  Score=33.34  Aligned_cols=30  Identities=20%  Similarity=0.107  Sum_probs=26.1

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 026217           55 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   85 (241)
Q Consensus        55 vlI~ga~g~~G~~avqla~~~g~~v~~~~~~   85 (241)
                      |+|+|| |+-|+.+...|.+.|.+|.++.+.
T Consensus         6 viIIGg-GpAGl~aA~~aar~G~~V~viE~~   35 (229)
T d3lada1           6 VIVIGA-GPGGYVAAIKSAQLGLKTALIEKY   35 (229)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEEECC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCeEEEEecc
Confidence            677796 999999999999999999999753

>d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Galactose/lactose metabolism regulatory protein GAL80
species: Yeast (Kluyveromyces lactis) [TaxId: 28985]

Probab=85.76  E-value=3.2  Score=29.10  Aligned_cols=93  Identities=10%  Similarity=-0.019  Sum_probs=55.6

Q ss_pred             cEEEEEcCCch----HHHHHHHHHHHc--CCEEEEEe-CCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEE
Q 026217           53 EYVFVSAASGA----VGQLVGQFAKLV--GCYVVGSA-GSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIY  125 (241)
Q Consensus        53 ~~vlI~ga~g~----~G~~avqla~~~--g~~v~~~~-~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v  125 (241)
                      =+|.|.|. |.    ++..-+...+..  ++++++++ +++++.+.+.++++....-.+.   ++.+.+.+   ..+|+|
T Consensus        17 irvgiIG~-G~~~~~~~~~h~~ai~~~~~~~~ivav~d~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~---~~iD~V   89 (237)
T d2nvwa1          17 IRVGFVGL-TSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFD---SLESFAQY---KDIDMI   89 (237)
T ss_dssp             EEEEEECC-CSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEES---CHHHHHHC---TTCSEE
T ss_pred             eEEEEEec-CccccHHHHHHHHHHHhcCCCeEEEEEEcCCHHHHHHHHHhcccccceeec---chhhcccc---ccccee
Confidence            37899996 54    444444444443  56888665 5555655555488765332233   34333332   369999


Q ss_pred             EeCCCc-hhHHHHHHhhccC-----CEEEEEee
Q 026217          126 FENVGG-KMLDAVLLNMRIQ-----GRITLCGM  152 (241)
Q Consensus       126 ~d~~g~-~~~~~~~~~l~~~-----G~~v~~g~  152 (241)
                      +.|+.. .+...+..++..|     ++-+.+..
T Consensus        90 ~i~tp~~~h~~~~~~al~aG~~~~~~k~V~~EK  122 (237)
T d2nvwa1          90 VVSVKVPEHYEVVKNILEHSSQNLNLRYLYVEW  122 (237)
T ss_dssp             EECSCHHHHHHHHHHHHHHSSSCSSCCEEEEES
T ss_pred             eccCCCcchhhHHHHHHHhcccccCCceEEEec
Confidence            999985 5666777777654     45566654

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=85.61  E-value=0.42  Score=35.79  Aligned_cols=33  Identities=12%  Similarity=-0.026  Sum_probs=26.0

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCH
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSK   86 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g--~~v~~~~~~~   86 (241)
                      .+|+|+|| |..|++++..++..|  .+|++..+++
T Consensus         5 KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~   39 (335)
T d2gv8a1           5 RKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRG   39 (335)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSS
T ss_pred             CeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCC
Confidence            47999997 999998876665554  5999999774

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=85.55  E-value=0.82  Score=31.23  Aligned_cols=38  Identities=26%  Similarity=0.197  Sum_probs=31.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK   93 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~   93 (241)
                      +|.|.| .|-+|+....++ +.|.+|++.+.++++.+.++
T Consensus         2 kI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din~~~v~~l~   39 (196)
T d1dlja2           2 KIAVAG-SGYVGLSLGVLL-SLQNEVTIVDILPSKVDKIN   39 (196)
T ss_dssp             EEEEEC-CSHHHHHHHHHH-TTTSEEEEECSCHHHHHHHH
T ss_pred             EEEEEC-CChhHHHHHHHH-HCCCcEEEEECCHHHHHHHh
Confidence            478898 599999876555 46999999999999988886

>d1ixka_ c.66.1.38 (A:) Hypothetical methyltransferase PH1374 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Hypothetical methyltransferase PH1374
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=85.43  E-value=4.8  Score=29.62  Aligned_cols=101  Identities=17%  Similarity=0.222  Sum_probs=59.8

Q ss_pred             hcCCCCCcEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---HcCCCeeecCCCchhHHHHHHHHCCC
Q 026217           46 VCSPKQGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYFPE  120 (241)
Q Consensus        46 ~~~~~~~~~vlI~ga~g~~G~~avqla~~~g--~~v~~~~~~~~~~~~~~~---~~g~~~~i~~~~~~~~~~~i~~~~~~  120 (241)
                      ...+++|++||=..|  +-|-=+.+++..++  ..+++.+.++++...+++   ++|...++..+.. ...  + ....+
T Consensus       111 ~l~~~~g~~vlD~CA--apGgKt~~l~~~~~~~~~i~a~d~~~~r~~~l~~~~~r~~~~~i~~~~~d-~~~--~-~~~~~  184 (313)
T d1ixka_         111 ALDPKPGEIVADMAA--APGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSS-SLH--I-GELNV  184 (313)
T ss_dssp             HHCCCTTCEEEECCS--SCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSC-GGG--G-GGGCC
T ss_pred             cccCCccceeeeccc--chhhhhHhhhhhcccccceeeeccCHHHHHHHHHHHHHHHhhcccccccc-ccc--c-ccccc
Confidence            457899999876653  22333455565553  479999999988766652   5666544333322 111  1 12233


Q ss_pred             CccEEE-e--CCCch--------------------------hHHHHHHhhccCCEEEEEee
Q 026217          121 GINIYF-E--NVGGK--------------------------MLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       121 ~~d~v~-d--~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~  152 (241)
                      .||.|+ |  |+|..                          .+..++..+++||++|....
T Consensus       185 ~fD~ILvDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lk~gG~lVYsTC  245 (313)
T d1ixka_         185 EFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTC  245 (313)
T ss_dssp             CEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred             cccEEEEccccccCCceeeccchhhhhhhhHHHHHHHHHHHHHHhhhheeCCCcEEEEeec
Confidence            688775 4  55532                          13567778888888776544

>d1g2qa_ c.61.1.1 (A:) Adenine PRTase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Adenine PRTase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=85.10  E-value=1.1  Score=30.36  Aligned_cols=36  Identities=14%  Similarity=0.272  Sum_probs=30.0

Q ss_pred             CCCCCcEEEEEc---CCchHHHHHHHHHHHcCCEEEEEe
Q 026217           48 SPKQGEYVFVSA---ASGAVGQLVGQFAKLVGCYVVGSA   83 (241)
Q Consensus        48 ~~~~~~~vlI~g---a~g~~G~~avqla~~~g~~v~~~~   83 (241)
                      .+.+|++|+|..   ++|++-.+++++++..|++|+.+.
T Consensus       118 ~l~~g~rVlIVDDviaTGgT~~a~~~ll~~~Ga~vvgv~  156 (178)
T d1g2qa_         118 AIPAGSNVIIVDDIIATGGSAAAAGELVEQLEANLLEYN  156 (178)
T ss_dssp             SSCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEE
T ss_pred             cccCCCEEEEEehHhhhChHHHHHHHHHHHcCCEEEEEE
Confidence            367889999885   689999999999999999766543

>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=85.05  E-value=0.38  Score=33.84  Aligned_cols=29  Identities=14%  Similarity=0.012  Sum_probs=26.0

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeC
Q 026217           55 VFVSAASGAVGQLVGQFAKLVGCYVVGSAG   84 (241)
Q Consensus        55 vlI~ga~g~~G~~avqla~~~g~~v~~~~~   84 (241)
                      |+|+|| |+-|+.+...|.+.|.+|.++..
T Consensus         6 viVIG~-GpaGl~aA~~aa~~G~kV~viE~   34 (235)
T d1h6va1           6 LIIIGG-GSGGLAAAKEAAKFDKKVMVLDF   34 (235)
T ss_dssp             EEEECC-SHHHHHHHHHHGGGCCCEEEECC
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCeEEEEec
Confidence            678896 99999999999999999999984

>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella putrefaciens [TaxId: 24]

Probab=85.04  E-value=0.39  Score=35.70  Aligned_cols=30  Identities=20%  Similarity=0.213  Sum_probs=26.4

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 026217           55 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   85 (241)
Q Consensus        55 vlI~ga~g~~G~~avqla~~~g~~v~~~~~~   85 (241)
                      |+|+|+ |..|+.+..-+...|++|+++.+.
T Consensus        26 VvVIG~-G~aGl~aA~~la~~G~~V~llEk~   55 (322)
T d1d4ca2          26 VVIIGS-GGAGLAAAVSARDAGAKVILLEKE   55 (322)
T ss_dssp             EEEECS-SHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            788895 999999888888889999999864

>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Haemophilus influenzae [TaxId: 727]

Probab=84.94  E-value=3.7  Score=30.04  Aligned_cols=51  Identities=20%  Similarity=0.249  Sum_probs=37.2

Q ss_pred             cCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHHcCCC
Q 026217           47 CSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG---SKDKVDLLKNKFGFD   99 (241)
Q Consensus        47 ~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~---~~~~~~~~~~~~g~~   99 (241)
                      ..+.++..|+... +|+-|+++...|+.+|.+.+++..   ++.+.+.++ .+|+.
T Consensus        56 g~~~~~~~vv~~S-sGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~-~~GA~  109 (310)
T d1y7la1          56 GTLTKGKEIVDAT-SGNTGIALAYVAAARGYKITLTMPETMSLERKRLLC-GLGVN  109 (310)
T ss_dssp             TSSCTTCEEEESC-CSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHH-HTTCE
T ss_pred             CCCCCCceeeeec-CCCchHHHHHHHHHhhccccccchhhhhhhhhhhHH-HhCCc
Confidence            4567777666655 799999999999999996555542   345677777 88874

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=84.73  E-value=0.16  Score=32.52  Aligned_cols=83  Identities=11%  Similarity=-0.002  Sum_probs=48.7

Q ss_pred             cEEEEEcCCchHHHHHHHHHH-HcCCEEEEEeCCHHHHHHHHHHcCCCeeecCCCchhHHHHHHHHCCCCccEEEeCCCc
Q 026217           53 EYVFVSAASGAVGQLVGQFAK-LVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG  131 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~-~~g~~v~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~  131 (241)
                      -+|+|+|| |..|.+.+.... ..++++++....+.+.. =+ .+.--.|++.+   .+.    +.....+++++-++..
T Consensus         4 ~~v~I~Ga-G~~G~~l~~~l~~~~~~~iv~fiDdd~~k~-G~-~I~Gi~V~~~~---~l~----~~~~~~i~iai~~i~~   73 (126)
T d2dt5a2           4 WGLCIVGM-GRLGSALADYPGFGESFELRGFFDVDPEKV-GR-PVRGGVIEHVD---LLP----QRVPGRIEIALLTVPR   73 (126)
T ss_dssp             EEEEEECC-SHHHHHHHHCSCCCSSEEEEEEEESCTTTT-TC-EETTEEEEEGG---GHH----HHSTTTCCEEEECSCH
T ss_pred             ceEEEEcC-CHHHHHHHHhHhhcCCcEEEEEEeCchHhc-CC-EECCEEEecHH---HHH----HHHhhcccEEEEeCCH
Confidence            47999997 999987665332 23668888774433211 11 22212354322   332    2233468889988887


Q ss_pred             hhHHHHHHhhccCC
Q 026217          132 KMLDAVLLNMRIQG  145 (241)
Q Consensus       132 ~~~~~~~~~l~~~G  145 (241)
                      ...+...+.|...|
T Consensus        74 ~~~~~I~d~l~~~g   87 (126)
T d2dt5a2          74 EAAQKAADLLVAAG   87 (126)
T ss_dssp             HHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHcC
Confidence            77677777666555

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=84.70  E-value=1.3  Score=27.80  Aligned_cols=60  Identities=13%  Similarity=0.108  Sum_probs=47.6

Q ss_pred             HhcCCCCCcEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHcCCCeeecCC
Q 026217           45 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKNKFGFDEAFNYK  105 (241)
Q Consensus        45 ~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g--~~v~~~~~~~~~~~~~~~~~g~~~~i~~~  105 (241)
                      +.+++...+.+++.-..-..-+.++..++.++  .++++.+.+++..+.++ ..|++.++..+
T Consensus        56 ~~a~i~~A~~vi~~~~~d~~n~~~~~~~r~~~~~~~iia~~~~~~~~~~l~-~~G~d~vi~p~  117 (129)
T d2fy8a1          56 EKANVRGARAVIVNLESDSETIHCILGIRKIDESVRIIAEAERYENIEQLR-MAGADQVISPF  117 (129)
T ss_dssp             HHTTCTTCSEEEECCSSHHHHHHHHHHHHHHCSSSCEEEECSSGGGHHHHH-HHHCSEEECHH
T ss_pred             HHhhhhcCcEEEEeccchhhhHHHHHHHHHHCCCceEEEEEcCHHHHHHHH-HCCCCEEEChH
Confidence            55788888888887655566677888888874  38999998999999999 99999888643

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=84.55  E-value=0.54  Score=30.43  Aligned_cols=35  Identities=17%  Similarity=0.097  Sum_probs=26.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHH
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDKV   89 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~--~v~~~~~~~~~~   89 (241)
                      .|.|.|+ |.+|......+...+.  ++...+.++++.
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~   38 (140)
T d1a5za1           2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRA   38 (140)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHH
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccc
Confidence            4788996 9999987776666654  888888776543

>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Fumarate reductase
species: Wolinella succinogenes [TaxId: 844]

Probab=84.53  E-value=0.42  Score=35.62  Aligned_cols=30  Identities=13%  Similarity=0.039  Sum_probs=26.3

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 026217           55 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   85 (241)
Q Consensus        55 vlI~ga~g~~G~~avqla~~~g~~v~~~~~~   85 (241)
                      |+|+|+ |..|+.++.-|...|++|+++...
T Consensus         8 VvVIG~-G~AGl~AAl~aa~~G~~V~liEK~   37 (336)
T d2bs2a2           8 SLVIGG-GLAGLRAAVATQQKGLSTIVLSLI   37 (336)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEecC
Confidence            788895 999999888888899999999864

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=84.34  E-value=1.5  Score=28.56  Aligned_cols=37  Identities=27%  Similarity=0.151  Sum_probs=30.1

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHH
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDK   88 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~--~v~~~~~~~~~   88 (241)
                      .+..|.|.|| |.+|...+..+...+.  +++.++..+++
T Consensus         5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~   43 (148)
T d1ldna1           5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESK   43 (148)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHH
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeecccc
Confidence            4568999996 9999988888777765  79999987765

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=84.07  E-value=0.63  Score=32.53  Aligned_cols=33  Identities=15%  Similarity=-0.020  Sum_probs=25.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHH--cCCEEEEEeCCHH
Q 026217           54 YVFVSAASGAVGQLVGQFAKL--VGCYVVGSAGSKD   87 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~--~g~~v~~~~~~~~   87 (241)
                      +|+|+|| |+-|+.++..++.  .|.+|++..+.+.
T Consensus         3 kv~iIGa-GpaGl~aA~~L~~~~~~~~V~v~e~~~~   37 (230)
T d1cjca2           3 QICVVGS-GPAGFYTAQHLLKHHSRAHVDIYEKQLV   37 (230)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSSCEEEEECSSSS
T ss_pred             eEEEECc-cHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence            7999996 9999988775544  3789999987643

>d1yzha1 c.66.1.53 (A:8-211) tRNA (guanine-N(7)-)-methyltransferase TrmB {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=84.07  E-value=3.1  Score=28.52  Aligned_cols=102  Identities=16%  Similarity=0.192  Sum_probs=64.2

Q ss_pred             HHHHHHhcCCCCCcEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HcCCC--eeecCCCchhHHHH
Q 026217           40 YAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKN---KFGFD--EAFNYKEEPDLDAA  113 (241)
Q Consensus        40 ~~~l~~~~~~~~~~~vlI~ga~g~~G~~avqla~~~-g~~v~~~~~~~~~~~~~~~---~~g~~--~~i~~~~~~~~~~~  113 (241)
                      |..++.  +  ....||=+|  -|.|..++.+|+.. ...+++++.++.....+.+   +.+..  .++..+.. .+.  
T Consensus        24 w~~~f~--~--~~plvLdIG--cG~G~~~~~lA~~~p~~~~iGid~~~~~v~~a~~~~~~~~l~Ni~~~~~da~-~l~--   94 (204)
T d1yzha1          24 WRDLFG--N--DNPIHVEVG--SGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGS-DLT--   94 (204)
T ss_dssp             HHHHHT--S--CCCEEEEES--CTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSS-CGG--
T ss_pred             HHHHcC--C--CCCeEEEEe--ccCCHHHHHHHHHCCCCceEEEeccHHHHHHHHHhhhhhccccceeeecCHH-HHh--
Confidence            555543  2  334566666  78899999999998 6799999999886665532   34543  23332222 221  


Q ss_pred             HHHHCCCCccEEEeCCC---------------chhHHHHHHhhccCCEEEEEe
Q 026217          114 LKRYFPEGINIYFENVG---------------GKMLDAVLLNMRIQGRITLCG  151 (241)
Q Consensus       114 i~~~~~~~~d~v~d~~g---------------~~~~~~~~~~l~~~G~~v~~g  151 (241)
                       .....+.+|.|+-...               .+.+..+.+.|++||.+....
T Consensus        95 -~~~~~~~~~~i~i~fPdPw~K~~h~krRl~~~~~l~~~~~~LkpgG~l~i~T  146 (204)
T d1yzha1          95 -DYFEDGEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKT  146 (204)
T ss_dssp             -GTSCTTCCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEE
T ss_pred             -hhccCCceehhcccccccccchhhhhhhhhHHHHHHHHHHhCCCCcEEEEEE
Confidence             1122336787754332               235778889999999987653

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=83.91  E-value=1.2  Score=29.41  Aligned_cols=44  Identities=16%  Similarity=0.221  Sum_probs=36.4

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF   96 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~   96 (241)
                      +|++|.|++.+|+.|.+++..+...|.++--  -+++..+.+++.+
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~~--l~~~t~~~L~~~l   45 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKLAT--LEEKTIEELRSFL   45 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEECC--CCHHHHHHHHHHS
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCccCC--CCHHHHHHHHHhC
Confidence            5889999999999999999999999987744  4578888888444

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=83.69  E-value=0.91  Score=29.54  Aligned_cols=33  Identities=21%  Similarity=0.102  Sum_probs=27.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCH
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSK   86 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~--~v~~~~~~~   86 (241)
                      .|.|.||+|.+|.....++...+.  ++..++..+
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~   36 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREH   36 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGG
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchh
Confidence            488999889999999888888885  788888653

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=83.66  E-value=1.1  Score=29.17  Aligned_cols=38  Identities=16%  Similarity=0.070  Sum_probs=25.9

Q ss_pred             EEEEEcCCchHHHHHHHHH-HHcC--CEEEEEeCCHHHHHH
Q 026217           54 YVFVSAASGAVGQLVGQFA-KLVG--CYVVGSAGSKDKVDL   91 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla-~~~g--~~v~~~~~~~~~~~~   91 (241)
                      .|.|.|++|.+|.....++ ...+  -++...+..+.....
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~   42 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGV   42 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHH
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhH
Confidence            4789998899998777654 3444  378888865443333

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=83.42  E-value=0.9  Score=28.16  Aligned_cols=34  Identities=9%  Similarity=-0.056  Sum_probs=26.0

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcC---CEEEEEeCC
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVG---CYVVGSAGS   85 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g---~~v~~~~~~   85 (241)
                      ..++++|.|| |.+|.-++..+..++   .+|+.+.+.
T Consensus        19 ~p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~   55 (117)
T d1aoga2          19 PPRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRG   55 (117)
T ss_dssp             CCSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESS
T ss_pred             cCCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEecc
Confidence            4578999996 999987776666654   478888865

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=83.32  E-value=0.57  Score=33.97  Aligned_cols=34  Identities=24%  Similarity=0.175  Sum_probs=26.7

Q ss_pred             CCcEEEEEcCCchHHHHHHH-HHHHcCCEEEEEeCCH
Q 026217           51 QGEYVFVSAASGAVGQLVGQ-FAKLVGCYVVGSAGSK   86 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avq-la~~~g~~v~~~~~~~   86 (241)
                      .-| |+|+|| |..|+.+.. +|+..|++|.++.+++
T Consensus        33 e~D-ViVIGa-GpaGL~aA~~LA~~~G~~V~vlE~~~   67 (278)
T d1rp0a1          33 ETD-VVVVGA-GSAGLSAAYEISKNPNVQVAIIEQSV   67 (278)
T ss_dssp             EEE-EEEECC-SHHHHHHHHHHHTSTTSCEEEEESSS
T ss_pred             CCC-EEEECC-CHHHHHHHHHHHHccCCeEEEEecCC
Confidence            344 888897 999997665 5666799999999764

>d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermotoga maritima [TaxId: 2336]

Probab=83.21  E-value=3.2  Score=27.56  Aligned_cols=93  Identities=16%  Similarity=0.229  Sum_probs=55.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc---CCEEEEEeC--CHHHHHHHHHHcCC-----C-----------------eeecCCC
Q 026217           54 YVFVSAASGAVGQLVGQFAKLV---GCYVVGSAG--SKDKVDLLKNKFGF-----D-----------------EAFNYKE  106 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~---g~~v~~~~~--~~~~~~~~~~~~g~-----~-----------------~~i~~~~  106 (241)
                      +|.|.|- |-+|+.+...+...   +++|+++-.  +.+...++. ++--     +                 .++..++
T Consensus         2 kIgINGf-GRIGR~v~R~~~~~~~~~i~vvaINd~~~~e~~ayLl-kyDS~hG~~~~~v~~~~~~l~ing~~I~~~~~~~   79 (169)
T d1hdgo1           2 RVAINGF-GRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLL-KYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPD   79 (169)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHH-HCCTTTCCCSSCEEECSSEEEETTEEEEEECCSS
T ss_pred             EEEEECC-ChHHHHHHHHHHhccCCCEEEEEeccCccHHHHHHHH-hccccccccCceEEEECCEEEECCEEEEEEeCCC
Confidence            6899994 99999998877643   468877753  244455554 3311     0                 0111111


Q ss_pred             chhHHHHHHHHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEeeec
Q 026217          107 EPDLDAALKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMIS  154 (241)
Q Consensus       107 ~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~  154 (241)
                      +    +++.+  ++ ++|+|+||+|. .....+..++..+.+-+.++.+.
T Consensus        80 p----~~i~W--~~~gvD~ViEcTG~f~t~~~~~~hl~~GakkViiSAP~  123 (169)
T d1hdgo1          80 P----SKLPW--KDLGVDFVIESTGVFRNREKAELHLQAGAKKVIITAPA  123 (169)
T ss_dssp             G----GGSCH--HHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred             h----hhCCc--cccCCCEEEEecceeccccchhhhccCCCceEEEeccc
Confidence            1    11110  02 69999999996 56667777787776666666543

>d1qama_ c.66.1.24 (A:) rRNA adenine dimethylase {Bacillus subtilis, Ermc' [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA adenine dimethylase-like
domain: rRNA adenine dimethylase
species: Bacillus subtilis, Ermc' [TaxId: 1423]

Probab=83.18  E-value=1.6  Score=30.85  Aligned_cols=49  Identities=10%  Similarity=0.122  Sum_probs=40.5

Q ss_pred             HhcCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc
Q 026217           45 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF   96 (241)
Q Consensus        45 ~~~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~~~~~~~~~~~   96 (241)
                      +.++++++|+|+-.|  -|.|.++-.+++. +.+|+++...+.-.+.+++.+
T Consensus        15 ~~~~~~~~d~VlEIG--pG~G~LT~~Ll~~-~~~v~avE~D~~l~~~l~~~~   63 (235)
T d1qama_          15 TNIRLNEHDNIFEIG--SGKGHFTLELVQR-CNFVTAIEIDHKLCKTTENKL   63 (235)
T ss_dssp             TTCCCCTTCEEEEEC--CTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHT
T ss_pred             HhcCCCCCCeEEEEC--CCchHHHHHHHhC-cCceEEEeeccchHHHHHHHh
Confidence            556789999999999  6788888888865 779999998888778887444

>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=82.64  E-value=0.51  Score=33.04  Aligned_cols=34  Identities=9%  Similarity=-0.058  Sum_probs=27.0

Q ss_pred             cEEEEEcCCchHHHHHHHHHHHcC-------CEEEEEeCCHH
Q 026217           53 EYVFVSAASGAVGQLVGQFAKLVG-------CYVVGSAGSKD   87 (241)
Q Consensus        53 ~~vlI~ga~g~~G~~avqla~~~g-------~~v~~~~~~~~   87 (241)
                      -+|+|+|| |+-|++++..+...|       .+|.+..+.+.
T Consensus         3 ~~VaVIGa-GpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~~   43 (239)
T d1lqta2           3 YYIAIVGS-GPSAFFAAASLLKAADTTEDLDMAVDMLEMLPT   43 (239)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSS
T ss_pred             cEEEEECc-CHHHHHHHHHHHHcCCccccCCCceEEEecCCC
Confidence            37999996 999998887777666       57999987653

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=82.27  E-value=2.6  Score=27.93  Aligned_cols=72  Identities=11%  Similarity=0.126  Sum_probs=41.0

Q ss_pred             CcEEEEEcCCchHHH--HHHHHHHHc-C---CEEEEEeCCHHHHHHHHH-------HcCCCeeecCCCchhHHHHHHHHC
Q 026217           52 GEYVFVSAASGAVGQ--LVGQFAKLV-G---CYVVGSAGSKDKVDLLKN-------KFGFDEAFNYKEEPDLDAALKRYF  118 (241)
Q Consensus        52 ~~~vlI~ga~g~~G~--~avqla~~~-g---~~v~~~~~~~~~~~~~~~-------~~g~~~~i~~~~~~~~~~~i~~~~  118 (241)
                      .-.|.|.|| |++|.  +...+++.. .   .+++..+.++++.+...+       ..+.+.-+....  +..+.++   
T Consensus         3 ~~KI~iIGa-Gsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~~--d~~eal~---   76 (167)
T d1u8xx1           3 SFSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATT--DPEEAFT---   76 (167)
T ss_dssp             CEEEEEECT-TSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEES--CHHHHHS---
T ss_pred             CceEEEECC-ChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEecC--ChhhccC---
Confidence            446889997 66653  344444433 2   379999988877542220       223332221111  3444453   


Q ss_pred             CCCccEEEeCCCc
Q 026217          119 PEGINIYFENVGG  131 (241)
Q Consensus       119 ~~~~d~v~d~~g~  131 (241)
                        +.|+|+.++|.
T Consensus        77 --~AD~Vvitag~   87 (167)
T d1u8xx1          77 --DVDFVMAHIRV   87 (167)
T ss_dssp             --SCSEEEECCCT
T ss_pred             --CCCEEEECCCc
Confidence              59999999984

>d1fcja_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Salmonella typhimurium [TaxId: 90371]

Probab=81.92  E-value=7.2  Score=28.11  Aligned_cols=51  Identities=22%  Similarity=0.217  Sum_probs=36.3

Q ss_pred             cCCCCCcEEEEEcCCchHHHHHHHHHHHcCCEEEEEe---CCHHHHHHHHHHcCCC
Q 026217           47 CSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSA---GSKDKVDLLKNKFGFD   99 (241)
Q Consensus        47 ~~~~~~~~vlI~ga~g~~G~~avqla~~~g~~v~~~~---~~~~~~~~~~~~~g~~   99 (241)
                      ..++++.+|...+ +|+.|.++.-.++.+|.+++++.   .++.+...++ .+|+.
T Consensus        56 g~~~~~~~vv~as-sGn~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~~~-~~ga~  109 (302)
T d1fcja_          56 GVLKPGVELVEPT-NGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLK-ALGAN  109 (302)
T ss_dssp             TCCCTTCEEEEEC-SSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHH-HTTCE
T ss_pred             CCCCCCceEEEec-cccchhHHHHHHHHhccCCceEEeecCcHHHHHHHH-Hhccc
Confidence            4567777655544 79999999999999998655544   2445667777 77764

>d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=81.88  E-value=0.93  Score=32.39  Aligned_cols=30  Identities=20%  Similarity=0.101  Sum_probs=26.6

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 026217           55 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   85 (241)
Q Consensus        55 vlI~ga~g~~G~~avqla~~~g~~v~~~~~~   85 (241)
                      ++|.|| |+-|+.+...|...|.+|.++.+.
T Consensus         4 viVIG~-G~aG~~aA~~aa~~G~~V~liE~~   33 (259)
T d1onfa1           4 LIVIGG-GSGGMAAARRAARHNAKVALVEKS   33 (259)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCeEEEEecC
Confidence            678896 999999999999999999999864

>d1o58a_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thermotoga maritima [TaxId: 2336]

Probab=81.84  E-value=2.9  Score=30.39  Aligned_cols=43  Identities=23%  Similarity=0.332  Sum_probs=32.2

Q ss_pred             EEEcCCchHHHHHHHHHHHcCCEEEEEe---CCHHHHHHHHHHcCCC
Q 026217           56 FVSAASGAVGQLVGQFAKLVGCYVVGSA---GSKDKVDLLKNKFGFD   99 (241)
Q Consensus        56 lI~ga~g~~G~~avqla~~~g~~v~~~~---~~~~~~~~~~~~~g~~   99 (241)
                      +|...+|+.|.++...|+.+|.+.+++.   .++.+.+.++ .+|+.
T Consensus        58 vv~~SsGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~~~-~~GA~  103 (293)
T d1o58a_          58 IVEPTSGNMGIAIAMIGAKRGHRVILTMPETMSVERRKVLK-MLGAE  103 (293)
T ss_dssp             EEEECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHH-HTTCE
T ss_pred             eEEecCcchhhHHHHhhhhccceeEeeccccccHHHeeccc-cCCcE
Confidence            5556679999999999999998544444   2456777777 88875

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=81.47  E-value=1.7  Score=28.40  Aligned_cols=37  Identities=14%  Similarity=0.100  Sum_probs=29.2

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHH
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDK   88 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~   88 (241)
                      |...|.|.|+ |.+|.....++...++ ++...+..+++
T Consensus         2 p~~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~   39 (150)
T d1t2da1           2 PKAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNM   39 (150)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCc
Confidence            4568999996 9999888877777777 88888876543

>d1mo9a1 c.3.1.5 (A:2-192,A:314-383) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=81.06  E-value=0.91  Score=32.48  Aligned_cols=30  Identities=13%  Similarity=0.185  Sum_probs=26.4

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 026217           55 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   85 (241)
Q Consensus        55 vlI~ga~g~~G~~avqla~~~g~~v~~~~~~   85 (241)
                      ++|+|+ |+.|+.+...+..+|.+|.++...
T Consensus        45 vvVIGg-G~aG~~aA~~~a~~G~kv~vve~~   74 (261)
T d1mo9a1          45 AIFIGG-GAAGRFGSAYLRAMGGRQLIVDRW   74 (261)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCeEEEEecc
Confidence            677796 999999999999999999999864

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=81.06  E-value=0.92  Score=33.07  Aligned_cols=31  Identities=16%  Similarity=0.136  Sum_probs=24.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC
Q 026217           54 YVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGS   85 (241)
Q Consensus        54 ~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~   85 (241)
                      .|+|+|| |.+|++++.-+...|. +|+++.++
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~   34 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQG   34 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCC
Confidence            3889996 9999987766667786 68888764

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=80.94  E-value=4.2  Score=26.18  Aligned_cols=71  Identities=13%  Similarity=0.105  Sum_probs=40.7

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH---HcCCCe-eecCCCchhHHHHHHHHCCCCccEE
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKN---KFGFDE-AFNYKEEPDLDAALKRYFPEGINIY  125 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~g~-~v~~~~~~~~~~~~~~~---~~g~~~-~i~~~~~~~~~~~i~~~~~~~~d~v  125 (241)
                      .|.+||=.+  .|+|...+..+ ..|+ +|+.+..+++..+.+++   .++... +--.+.  +..+.+.. ..+.+|+|
T Consensus        14 ~g~~vlDl~--~GtG~~~iea~-~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~--D~~~~l~~-~~~~fDiI   87 (152)
T d2esra1          14 NGGRVLDLF--AGSGGLAIEAV-SRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKM--EAERAIDC-LTGRFDLV   87 (152)
T ss_dssp             CSCEEEEET--CTTCHHHHHHH-HTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECS--CHHHHHHH-BCSCEEEE
T ss_pred             CCCeEEEcC--CccCHHHHHHH-HhCcceeeeehhchhhhhhhhhhhhhcccccchhhhcc--cccccccc-ccccccee
Confidence            577777666  33344444433 4576 99999999888777663   234421 111222  44444443 34479988


Q ss_pred             Ee
Q 026217          126 FE  127 (241)
Q Consensus       126 ~d  127 (241)
                      |-
T Consensus        88 f~   89 (152)
T d2esra1          88 FL   89 (152)
T ss_dssp             EE
T ss_pred             Ee
Confidence            74

>d2cula1 c.3.1.7 (A:2-231) GidA-related protein TTHA1897 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GidA-like
domain: GidA-related protein TTHA1897
species: Thermus thermophilus [TaxId: 274]

Probab=80.78  E-value=1.2  Score=31.42  Aligned_cols=31  Identities=23%  Similarity=0.131  Sum_probs=27.1

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 026217           55 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK   86 (241)
Q Consensus        55 vlI~ga~g~~G~~avqla~~~g~~v~~~~~~~   86 (241)
                      |+|+|| |.-|..|+-.|.+.|+++..+..+.
T Consensus         5 VIVIGg-G~AG~eAA~~aAR~G~ktllit~~~   35 (230)
T d2cula1           5 VLIVGA-GFSGAETAFWLAQKGVRVGLLTQSL   35 (230)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEEecc
Confidence            677896 9999999999999999988888664

>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=80.60  E-value=0.95  Score=34.59  Aligned_cols=30  Identities=20%  Similarity=0.106  Sum_probs=23.3

Q ss_pred             EEEEcCCchHHHHHHHHHHH------cCCEEEEEeCC
Q 026217           55 VFVSAASGAVGQLVGQFAKL------VGCYVVGSAGS   85 (241)
Q Consensus        55 vlI~ga~g~~G~~avqla~~------~g~~v~~~~~~   85 (241)
                      |+|+|| |+-|+++...+.+      .|++|.++.+.
T Consensus        35 ViIVGg-GPAGlsaA~~LA~l~~~~~~Gl~VlllEK~   70 (380)
T d2gmha1          35 VVIVGA-GPAGLSAATRLKQLAAQHEKDLRVCLVEKA   70 (380)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHHHHTTCCCCEEEECSS
T ss_pred             EEEECC-CHHHHHHHHHHHhhhhhhcCCCEEEEEcCC
Confidence            788897 9999876554443      68999999975

>d1jsxa_ c.66.1.20 (A:) Glucose-inhibited division protein B (GidB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glucose-inhibited division protein B (GidB)
domain: Glucose-inhibited division protein B (GidB)
species: Escherichia coli [TaxId: 562]

Probab=80.19  E-value=4.6  Score=27.74  Aligned_cols=92  Identities=14%  Similarity=0.082  Sum_probs=59.2

Q ss_pred             CCcEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HcCCC--eeecCCCchhHHHHHHHHCCC-Ccc
Q 026217           51 QGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKN---KFGFD--EAFNYKEEPDLDAALKRYFPE-GIN  123 (241)
Q Consensus        51 ~~~~vlI~ga~g~~G~~avqla~~~-g~~v~~~~~~~~~~~~~~~---~~g~~--~~i~~~~~~~~~~~i~~~~~~-~~d  123 (241)
                      ++++++=.|  +|-|.=.+-+|-.. ..+++.++++.++..++++   ++|.+  ++++.+.+ +       .... .+|
T Consensus        65 ~~~~ilDiG--sGaG~PGi~laI~~p~~~~~Lves~~KK~~FL~~~~~~L~L~nv~v~~~R~E-~-------~~~~~~fD  134 (207)
T d1jsxa_          65 QGERFIDVG--TGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVE-E-------FPSEPPFD  134 (207)
T ss_dssp             CSSEEEEET--CTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTT-T-------SCCCSCEE
T ss_pred             cCCceeeee--ccCCceeeehhhhcccceEEEEecchHHHHHHHHHHHHcCCcceeeeccchh-h-------hccccccc
Confidence            456777667  34444445555554 5799999999999887763   46664  45544443 2       1122 689


Q ss_pred             EEEe-CCCc--hhHHHHHHhhccCCEEEEEee
Q 026217          124 IYFE-NVGG--KMLDAVLLNMRIQGRITLCGM  152 (241)
Q Consensus       124 ~v~d-~~g~--~~~~~~~~~l~~~G~~v~~g~  152 (241)
                      +|.. +++.  ..+..+...++++|+++.+-.
T Consensus       135 ~V~sRA~~~~~~ll~~~~~~l~~~g~~~~~KG  166 (207)
T d1jsxa_         135 GVISRAFASLNDMVSWCHHLPGEQGRFYALKG  166 (207)
T ss_dssp             EEECSCSSSHHHHHHHHTTSEEEEEEEEEEES
T ss_pred             eehhhhhcCHHHHHHHHHHhcCCCcEEEEECC
Confidence            8875 4443  456677778888999988743