Citrus Sinensis ID: 026265

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-
Protein Sequence
MGAEHLIINREASQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR
Secondary Structure (PSIPRED)
ccccccccccccccccEEEEEccccEEEEEEEccHHHHHHccccccccEEccHHHHHHHHHHHHHcccccccccEEEcccHHHHHHHHHHHHccccEEEEEEEEccHHHHHHHHHHHHcccEEccEEccccccEEEEEEEcccccEEEEEccccccccccccccHHHHccccEEEEEEccccHHHHHHHHHHHHHccccEEEEcccHHHHHcccHHHHHHHccccccEEEccHHHHHHHHc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccEEEEEccccEEEEEEEccHHHHHHccccccccEEEcHHHHHHHHHHHHHHHHHccccEEEEcccHHHHHHHHHHHHccccEEEEEEEcccHHHHHHHHHHHHcccccccccccccccEEEEEEEcccccccHHHHHHHHHcccHHcccHHHHHHccEEEEEEEcccHHHHHHHHHHHHHcccEEEEEcccHHHHHHccHHHHHHHHcccEEEEEEcHHHHHHHHc
Coil and Loop (DISEMBL)
MGAEHLIINREASQAALILGLQPAALIDHVARVDWSlldqipgerggsiPVAIEELEHILSEVKthildepspiktiaggsvtntirglsvgfgvpcgligaygddqqgqlFVSNmqfsgvdvsrlrmkrgptgqcvclvdasgnrtmrpclsNAVKIQADELIAEDVKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQllesgdvdlcfaNEDEAAELVR
Flexible Loop (DISEMBL)
MGAEHLIINREASQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKthildepspiktiAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSrlrmkrgptGQCVCLvdasgnrtmrPCLSNAVKIQADELIAEDVKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR
Low Complexity Region (SEG)
MGAEHLIINREASQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR
Disordered region (IsUnstruct)
*****LIINREASQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFA**********
Disordered Region (DISOPRED)
****************LILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR
Disordered Region (DISEMBL)
MGAEHLIINREASQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR
Disordered Region (DISPRO)
************SQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGAEHLIINREASQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	241	2.2.26 [Sep-21-2011]
Q55480	333	Uncharacterized sugar kin	N/A	no	0.663	0.480	0.295	3e-09
O49923	343	Adenosine kinase OS=Physc	N/A	no	0.659	0.463	0.284	1e-05
P0AEW6	434	Inosine-guanosine kinase	N/A	no	0.896	0.497	0.254	4e-05
P0AEW7	434	Inosine-guanosine kinase	yes	no	0.896	0.497	0.254	4e-05
P0AEW8	434	Inosine-guanosine kinase	N/A	no	0.896	0.497	0.254	4e-05
Q9LZG0	345	Adenosine kinase 2 OS=Ara	no	no	0.663	0.463	0.254	4e-05
Q64640	361	Adenosine kinase OS=Rattu	yes	no	0.834	0.556	0.228	0.0002

>sp|Q55480|YZ37_SYNY3 Uncharacterized sugar kinase slr0537 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr0537 PE=3 SV=1

 Score = 62.0 bits (149), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 16/176 (9%)

Query: 75  KTIAGGSVTNTIRGLS----VGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVS--RLRM 128
           K  +GGS  NT+  L+     GF   C +    G D+ G  ++ ++   G+D +      
Sbjct: 57  KQSSGGSAANTLVSLAQLGGTGF-YACKV----GKDEAGAFYLQDLNDCGLDTNPHHETA 111

Query: 129 KRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLVLRFGMFNFEVIQA 188
             G TG+C+  V    +RTM   L  +  +   E+    +K S++L L   +      +A
Sbjct: 112 GEGITGKCLVFVTPDADRTMNAFLGISGSLSVTEMDWSALKQSQYLYLEGYLVTSPSAKA 171

Query: 189 AI----RIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELV 240
           A      IA+Q G+   + L+   M + F+  L ++L SG VDL FANE EA E+ 
Sbjct: 172 ACIEAKAIAEQSGVKTCLSLSDPNMAKFFQDGLKEMLGSG-VDLLFANEAEALEMA 226

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: -

>sp|O49923|ADK_PHYPA Adenosine kinase OS=Physcomitrella patens subsp. patens GN=ADK PE=2 SV=1

 Score = 50.4 bits (119), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 77/172 (44%), Gaps = 13/172 (7%)

Query: 74  IKTIAGGSVTNTIR--GLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG 131
           ++ IAGG+  NTIR     +G        G  G D+ G          GV++     +  
Sbjct: 56  VEYIAGGATQNTIRIAQWMLGESNATSYFGCVGKDEYGDRMFKLASEGGVNIRYDVDEDL 115

Query: 132 PTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAED----VKGSKWLVLRFGMF---NFE 184
           PTG C  LV   G R++   LS A K + D L   +    V+ +K+ +   G F   + E
Sbjct: 116 PTGTCGVLV-VKGERSLVANLSAANKYKIDHLKKPENWAFVEKAKY-IYSAGFFLTVSPE 173

Query: 185 VIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEA 236
            +    + A + G    ++LA+  + + F+ PL++L     VD  F NE EA
Sbjct: 174 SMMTVAKHAAETGKYYMINLAAPFICQFFKDPLMELFPY--VDFIFGNESEA 223

ATP dependent phosphorylation of adenosine and other related nucleoside analogs to monophosphate derivatives. Can also act on the cytokinin isopentenyladenosine to produce isopentenyladenosine monophosphate.

Physcomitrella patens subsp. patens (taxid: 145481)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 2

EC: 0

>sp|P0AEW6|INGK_ECOLI Inosine-guanosine kinase OS=Escherichia coli (strain K12) GN=gsk PE=1 SV=1

 Score = 48.5 bits (114), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 105/244 (43%), Gaps = 28/244 (11%)

Query: 13  SQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPS 72
           + AA ++G+    L+D  A+VD   +++     G S+ +  +  E +  E+K   L    
Sbjct: 31  TSAAWVVGID-QTLVDIEAKVDDEFIERYGLSAGHSLVIEDDVAEALYQELKQKNLI--- 86

Query: 73  PIKTIAGGSVTNTIRGLSVG-------FGVPCG--LIGAYGDDQQGQLFVSNMQFSGVDV 123
                AGG++ NT+   SV         GV C    IG+Y        ++ N   S  D+
Sbjct: 87  -THQFAGGTIGNTMHNYSVLADDRSVLLGVMCSNIEIGSYA-----YRYLCNTS-SRTDL 139

Query: 124 SRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLVL------- 176
           + L+   GP G+C  L+  SG RT      +  +++A+ +  + + G+  LVL       
Sbjct: 140 NYLQGVDGPIGRCFTLIGESGERTFAISPGHMNQLRAESIPEDVIAGASALVLTSYLVRC 199

Query: 177 RFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEA 236
           + G    E    AI  AK+  + V + L +  ++        Q L+   V +   NEDEA
Sbjct: 200 KPGEPMPEATMKAIEYAKKYNVPVVLTLGTKFVIAENPQWWQQFLKD-HVSILAMNEDEA 258

Query: 237 AELV 240
             L 
Sbjct: 259 EALT 262

Escherichia coli (strain K12) (taxid: 83333)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 7

EC: 3

>sp|P0AEW7|INGK_ECOL6 Inosine-guanosine kinase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=gsk PE=3 SV=1

 Score = 48.5 bits (114), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 105/244 (43%), Gaps = 28/244 (11%)

Query: 13  SQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPS 72
           + AA ++G+    L+D  A+VD   +++     G S+ +  +  E +  E+K   L    
Sbjct: 31  TSAAWVVGID-QTLVDIEAKVDDEFIERYGLSAGHSLVIEDDVAEALYQELKQKNLI--- 86

Query: 73  PIKTIAGGSVTNTIRGLSVG-------FGVPCG--LIGAYGDDQQGQLFVSNMQFSGVDV 123
                AGG++ NT+   SV         GV C    IG+Y        ++ N   S  D+
Sbjct: 87  -THQFAGGTIGNTMHNYSVLADDRSVLLGVMCSNIEIGSYA-----YRYLCNTS-SRTDL 139

Query: 124 SRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLVL------- 176
           + L+   GP G+C  L+  SG RT      +  +++A+ +  + + G+  LVL       
Sbjct: 140 NYLQGVDGPIGRCFTLIGESGERTFAISPGHMNQLRAESIPEDVIAGASALVLTSYLVRC 199

Query: 177 RFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEA 236
           + G    E    AI  AK+  + V + L +  ++        Q L+   V +   NEDEA
Sbjct: 200 KPGEPMPEATMKAIEYAKKYNVPVVLTLGTKFVIAENPQWWQQFLKD-HVSILAMNEDEA 258

Query: 237 AELV 240
             L 
Sbjct: 259 EALT 262

Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) (taxid: 199310)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 7

EC: 3

>sp|P0AEW8|INGK_ECO57 Inosine-guanosine kinase OS=Escherichia coli O157:H7 GN=gsk PE=3 SV=1

 Score = 48.5 bits (114), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 105/244 (43%), Gaps = 28/244 (11%)

Query: 13  SQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPS 72
           + AA ++G+    L+D  A+VD   +++     G S+ +  +  E +  E+K   L    
Sbjct: 31  TSAAWVVGID-QTLVDIEAKVDDEFIERYGLSAGHSLVIEDDVAEALYQELKQKNLI--- 86

Query: 73  PIKTIAGGSVTNTIRGLSVG-------FGVPCG--LIGAYGDDQQGQLFVSNMQFSGVDV 123
                AGG++ NT+   SV         GV C    IG+Y        ++ N   S  D+
Sbjct: 87  -THQFAGGTIGNTMHNYSVLADDRSVLLGVMCSNIEIGSYA-----YRYLCNTS-SRTDL 139

Query: 124 SRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLVL------- 176
           + L+   GP G+C  L+  SG RT      +  +++A+ +  + + G+  LVL       
Sbjct: 140 NYLQGVDGPIGRCFTLIGESGERTFAISPGHMNQLRAESIPEDVIAGASALVLTSYLVRC 199

Query: 177 RFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEA 236
           + G    E    AI  AK+  + V + L +  ++        Q L+   V +   NEDEA
Sbjct: 200 KPGEPMPEATMKAIEYAKKYNVPVVLTLGTKFVIAENPQWWQQFLKD-HVSILAMNEDEA 258

Query: 237 AELV 240
             L 
Sbjct: 259 EALT 262

Escherichia coli O157:H7 (taxid: 83334)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 7

EC: 3

>sp|Q9LZG0|ADK2_ARATH Adenosine kinase 2 OS=Arabidopsis thaliana GN=ADK2 PE=1 SV=1

 Score = 48.5 bits (114), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 75/181 (41%), Gaps = 21/181 (11%)

Query: 74  IKTIAGGSVTNTIRGLSVGFGVP--CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG 131
           ++ IAGG+  N+I+       +P     +G+ G D+ G+    +   +GV+V     +  
Sbjct: 60  VEYIAGGATQNSIKVAQWMLQIPGATSYMGSIGKDKYGEAMKKDATAAGVNVHYYEDESA 119

Query: 132 PTGQC-VCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLVLRFGMFNF------- 183
           PTG C VC+V   G R++   LS A   + D L     K   W ++    F +       
Sbjct: 120 PTGTCGVCVV--GGERSLIANLSAANCYKVDHL----KKPENWALVEKAKFYYIAGFFLT 173

Query: 184 ---EVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELV 240
              E IQ     A       +M+L++  +   F+    + L    +D  F NE EA    
Sbjct: 174 VSPESIQLVSEHAAANNKVFTMNLSAPFICEFFKDVQEKFLPY--MDFVFGNETEARTFS 231

Query: 241 R 241
           R
Sbjct: 232 R 232

ATP dependent phosphorylation of adenosine and other related nucleoside analogs to monophosphate derivatives. Essential to sustain methyl recycling.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 2

EC: 0

>sp|Q64640|ADK_RAT Adenosine kinase OS=Rattus norvegicus GN=Adk PE=1 SV=3

 Score = 46.6 bits (109), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/232 (22%), Positives = 100/232 (43%), Gaps = 31/232 (13%)

Query: 26  LIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVK-THILDE---PSPIKTIAGGS 81
           L+D  A VD   LD+           +++  + IL+E K   + DE      ++  AGGS
Sbjct: 32  LLDISAVVDKDFLDKY----------SLKPNDQILAEDKHKELFDELVKKFKVEYHAGGS 81

Query: 82  VTNTIRGLSVGFGVP---CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVC 138
             N+++        P       G  G D+ G++  S    + VD         PTG C  
Sbjct: 82  TQNSMKVAQWMIQEPHRAATFFGCIGIDKFGEILKSKAADAHVDAHYYEQNEQPTGTCAA 141

Query: 139 LVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLVLRFGMFNF---------EVIQAA 189
            +   GNR++   L+ A   + ++ +  D++ +  LV +  ++           E +   
Sbjct: 142 CI-TGGNRSLVANLAAANCYKKEKHL--DLENNWMLVEKARVYYIAGFFLTVSPESVLKV 198

Query: 190 IRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR 241
            R A +   + +++L++  + + F+  L++++    VD+ F NE EAA   R
Sbjct: 199 ARYAAENNRTFTLNLSAPFISQFFKEALMEVMPY--VDILFGNETEAATFAR 248

ATP dependent phosphorylation of adenosine and other related nucleoside analogs to monophosphate derivatives. Serves as a potential regulator of concentrations of extracellular adenosine and intracellular adenine nucleotides.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 2

EC: 0

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	241
255538696	368	Adenosine kinase, putative [Ricinus comm	1.0	0.654	0.783	1e-106
224066185	348	predicted protein [Populus trichocarpa]	0.933	0.646	0.789	1e-100
118486455	368	unknown [Populus trichocarpa]	1.0	0.654	0.746	1e-99
224082890	348	predicted protein [Populus trichocarpa]	0.933	0.646	0.776	2e-97
312281597	355	unnamed protein product [Thellungiella h	0.950	0.645	0.761	3e-97
302142517	425	unnamed protein product [Vitis vinifera]	1.0	0.567	0.717	4e-97
359492147	386	PREDICTED: uncharacterized sugar kinase	1.0	0.624	0.717	6e-97
297844934	355	pfkB-type carbohydrate kinase family pro	0.937	0.636	0.767	2e-95
449469961	365	PREDICTED: uncharacterized sugar kinase	1.0	0.660	0.703	1e-94
356564288	376	PREDICTED: uncharacterized sugar kinase	1.0	0.640	0.703	9e-94

>gi|255538696|ref|XP_002510413.1| Adenosine kinase, putative [Ricinus communis] gi|223551114|gb|EEF52600.1| Adenosine kinase, putative [Ricinus communis]

 Score =  390 bits (1002), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 195/249 (78%), Positives = 214/249 (85%), Gaps = 8/249 (3%)

Query: 1   MGAEHLIINRE-----ASQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEE 55
           MGAE L  N E          L+LGLQPAALIDHVARVDWSLLDQIPG+RGGSIPVAIEE
Sbjct: 1   MGAEALPRNIEIAPAAPPPPPLVLGLQPAALIDHVARVDWSLLDQIPGDRGGSIPVAIEE 60

Query: 56  LEHILSEVKTHILDEP---SPIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLF 112
           LEHIL EV+TH++  P   SPIKTIAGGSV NTIRGLS GFGV CG+IGAYGDD +G+LF
Sbjct: 61  LEHILREVETHMITSPDNASPIKTIAGGSVANTIRGLSAGFGVSCGIIGAYGDDDEGKLF 120

Query: 113 VSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSK 172
           VSNM F GV++SRLR K GPTGQCVCLVDA GNRTMRPCLS+AVK+QA+ELI ED KGSK
Sbjct: 121 VSNMGFCGVNLSRLRRKIGPTGQCVCLVDALGNRTMRPCLSSAVKVQANELINEDFKGSK 180

Query: 173 WLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFAN 232
           WLV+R+G+FN EVIQAAIRIAKQEGL VS+DLASFEMVRNFR PLLQLLESGD+DLCFAN
Sbjct: 181 WLVMRYGIFNIEVIQAAIRIAKQEGLCVSLDLASFEMVRNFRLPLLQLLESGDIDLCFAN 240

Query: 233 EDEAAELVR 241
           EDEA EL+R
Sbjct: 241 EDEAVELLR 249

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224066185|ref|XP_002302023.1| predicted protein [Populus trichocarpa] gi|222843749|gb|EEE81296.1| predicted protein [Populus trichocarpa]

 Score =  370 bits (951), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 180/228 (78%), Positives = 203/228 (89%), Gaps = 3/228 (1%)

Query: 17  LILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHIL---DEPSP 73
           L+LGLQPAAL+D+VA VDWSLLDQIPG+RGGS+PVAIEELEHIL EVK H L   DE SP
Sbjct: 2   LVLGLQPAALVDNVAHVDWSLLDQIPGDRGGSMPVAIEELEHILKEVKAHKLASPDELSP 61

Query: 74  IKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPT 133
           +KT+AGGSV NTIRGLS GFGV CG+IGA GDD+QG+LFVSNM F+GV++SRLRMK+G T
Sbjct: 62  MKTMAGGSVANTIRGLSAGFGVSCGIIGACGDDEQGKLFVSNMSFNGVNLSRLRMKQGHT 121

Query: 134 GQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLVLRFGMFNFEVIQAAIRIA 193
            QCVC+VD  GNRTMRPCLS+AVK+QADEL  ED KGSKWLVLR+ +FN EVIQAAIR A
Sbjct: 122 AQCVCMVDELGNRTMRPCLSSAVKVQADELTKEDFKGSKWLVLRYAIFNLEVIQAAIRNA 181

Query: 194 KQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR 241
           KQEGL VS+DLASFEMVRNFR+PLLQLLESGD+DLCFANEDEA EL+R
Sbjct: 182 KQEGLFVSLDLASFEMVRNFRSPLLQLLESGDIDLCFANEDEAMELLR 229

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118486455|gb|ABK95067.1| unknown [Populus trichocarpa]

 Score =  368 bits (944), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 186/249 (74%), Positives = 209/249 (83%), Gaps = 8/249 (3%)

Query: 1   MGAEHLIINREASQAA-----LILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEE 55
           MGAE L  N E + AA     LILGLQPAAL+DHVA VDWSLLDQIPG+RGGS+PVAIEE
Sbjct: 1   MGAEALPRNDEIAAAAVSSHPLILGLQPAALVDHVAPVDWSLLDQIPGDRGGSMPVAIEE 60

Query: 56  LEHILSEVKTHIL---DEPSPIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLF 112
           L+HIL  VK H L   DE SP+KT+AGGSV NTIRGLS GFGV CG+IGA GDD+QG+LF
Sbjct: 61  LDHILEAVKAHKLASPDELSPMKTMAGGSVANTIRGLSAGFGVSCGIIGACGDDEQGKLF 120

Query: 113 VSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSK 172
           VSNM FS V++SRLRMK+G T QC+C+VD   NRTMRPCLS+AVKIQADEL  ED KGSK
Sbjct: 121 VSNMSFSRVNLSRLRMKQGHTAQCICMVDELANRTMRPCLSSAVKIQADELTKEDFKGSK 180

Query: 173 WLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFAN 232
           WLVLR+ +FN +VIQAAIRIAKQEGL VS+DLASFEMVRNFR+ L QLLESGD+DLCFAN
Sbjct: 181 WLVLRYAIFNLDVIQAAIRIAKQEGLLVSLDLASFEMVRNFRSSLQQLLESGDIDLCFAN 240

Query: 233 EDEAAELVR 241
           EDEA EL+R
Sbjct: 241 EDEAMELLR 249

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224082890|ref|XP_002306879.1| predicted protein [Populus trichocarpa] gi|222856328|gb|EEE93875.1| predicted protein [Populus trichocarpa]

 Score =  361 bits (926), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 177/228 (77%), Positives = 199/228 (87%), Gaps = 3/228 (1%)

Query: 17  LILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHIL---DEPSP 73
           LILGLQPAAL+DHVA VDWSLLDQIPG+RGGS+PVAIEEL+HIL  VK H L   DE SP
Sbjct: 2   LILGLQPAALVDHVAPVDWSLLDQIPGDRGGSMPVAIEELDHILEAVKAHKLASPDELSP 61

Query: 74  IKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPT 133
           +KT+AGGSV NTIRGLS GFGV CG+IGA GDD+QG+LFVSNM FS V++SRLRMK+G T
Sbjct: 62  MKTMAGGSVANTIRGLSAGFGVSCGIIGACGDDEQGKLFVSNMSFSRVNLSRLRMKQGHT 121

Query: 134 GQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLVLRFGMFNFEVIQAAIRIA 193
            QC+C+VD   NRTMRPCLS+AVKIQADEL  ED KGSKWLVLR+ +FN +VIQAAIRIA
Sbjct: 122 AQCICMVDELANRTMRPCLSSAVKIQADELTKEDFKGSKWLVLRYAIFNLDVIQAAIRIA 181

Query: 194 KQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR 241
           KQEGL VS+DLASFEMVRNFR+ L QLLESGD+DLCFANEDEA EL+R
Sbjct: 182 KQEGLLVSLDLASFEMVRNFRSSLQQLLESGDIDLCFANEDEAMELLR 229

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|312281597|dbj|BAJ33664.1| unnamed protein product [Thellungiella halophila]

 Score =  360 bits (923), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 176/231 (76%), Positives = 200/231 (86%), Gaps = 2/231 (0%)

Query: 11  EASQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDE 70
           ++ +A L+LGLQPAALID+VA VDWSLLDQIPG+RGGS+PV  +ELE IL EV TH+   
Sbjct: 8   KSPEAPLVLGLQPAALIDNVAPVDWSLLDQIPGDRGGSVPVQKDELERILKEVNTHV--S 65

Query: 71  PSPIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKR 130
            +P K +AGGSVTNT+RGLSVGFGV  GLIGAYGDD+QGQLFVSNM FSGV +SRLR K+
Sbjct: 66  ATPFKKMAGGSVTNTVRGLSVGFGVATGLIGAYGDDEQGQLFVSNMGFSGVSISRLRKKK 125

Query: 131 GPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLVLRFGMFNFEVIQAAI 190
           G T QCVCLVD SGNRTMRPCLS+AVKIQADEL  ED  GSKWLVLR+ + N EVIQAAI
Sbjct: 126 GSTAQCVCLVDDSGNRTMRPCLSSAVKIQADELNKEDFTGSKWLVLRYAVLNLEVIQAAI 185

Query: 191 RIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR 241
           RIAKQEGLSVS+DLASFEMVRN+R+ L QLLESG++DLCFANEDEAAEL+R
Sbjct: 186 RIAKQEGLSVSLDLASFEMVRNYRSELRQLLESGNIDLCFANEDEAAELLR 236

Source: Thellungiella halophila

Species: Eutrema halophilum

Genus: Eutrema

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302142517|emb|CBI19720.3| unnamed protein product [Vitis vinifera]

 Score =  360 bits (923), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 178/248 (71%), Positives = 211/248 (85%), Gaps = 7/248 (2%)

Query: 1   MGAEHLIINREASQ----AALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEEL 56
           MGAE L+  +  +     + LILGLQP+ALIDHVA++D SLL QIPGERGGSI VAIE+L
Sbjct: 59  MGAEPLLPKKTHTHTQPNSPLILGLQPSALIDHVAKIDSSLLAQIPGERGGSIAVAIEDL 118

Query: 57  EHILSEVKTHILD---EPSPIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFV 113
           EHIL+EVKTHIL    +PSP++T+AGGSV NTIRGLS GFGV CG++GA GDD+QG LFV
Sbjct: 119 EHILNEVKTHILSSPPDPSPMRTMAGGSVANTIRGLSAGFGVNCGILGACGDDEQGGLFV 178

Query: 114 SNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKW 173
           SNM  SGV++S LR+K+GPT QCVCLVDA GNRTMRPCLS+AVKIQA+EL  ED KG KW
Sbjct: 179 SNMGSSGVNLSALRIKKGPTAQCVCLVDALGNRTMRPCLSSAVKIQAEELTKEDFKGVKW 238

Query: 174 LVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANE 233
           LV+R+G++N EVI AAIR+AKQEG+ VS+DLASFEMVRNFR PLL+LL+SGD+DLCFANE
Sbjct: 239 LVMRYGIYNLEVIHAAIRMAKQEGVFVSLDLASFEMVRNFRGPLLELLQSGDIDLCFANE 298

Query: 234 DEAAELVR 241
           DEA EL+R
Sbjct: 299 DEARELLR 306

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359492147|ref|XP_002281978.2| PREDICTED: uncharacterized sugar kinase slr0537-like isoform 1 [Vitis vinifera]

 Score =  359 bits (921), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 178/248 (71%), Positives = 211/248 (85%), Gaps = 7/248 (2%)

Query: 1   MGAEHLIINREASQ----AALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEEL 56
           MGAE L+  +  +     + LILGLQP+ALIDHVA++D SLL QIPGERGGSI VAIE+L
Sbjct: 20  MGAEPLLPKKTHTHTQPNSPLILGLQPSALIDHVAKIDSSLLAQIPGERGGSIAVAIEDL 79

Query: 57  EHILSEVKTHILD---EPSPIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFV 113
           EHIL+EVKTHIL    +PSP++T+AGGSV NTIRGLS GFGV CG++GA GDD+QG LFV
Sbjct: 80  EHILNEVKTHILSSPPDPSPMRTMAGGSVANTIRGLSAGFGVNCGILGACGDDEQGGLFV 139

Query: 114 SNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKW 173
           SNM  SGV++S LR+K+GPT QCVCLVDA GNRTMRPCLS+AVKIQA+EL  ED KG KW
Sbjct: 140 SNMGSSGVNLSALRIKKGPTAQCVCLVDALGNRTMRPCLSSAVKIQAEELTKEDFKGVKW 199

Query: 174 LVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANE 233
           LV+R+G++N EVI AAIR+AKQEG+ VS+DLASFEMVRNFR PLL+LL+SGD+DLCFANE
Sbjct: 200 LVMRYGIYNLEVIHAAIRMAKQEGVFVSLDLASFEMVRNFRGPLLELLQSGDIDLCFANE 259

Query: 234 DEAAELVR 241
           DEA EL+R
Sbjct: 260 DEARELLR 267

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297844934|ref|XP_002890348.1| pfkB-type carbohydrate kinase family protein [Arabidopsis lyrata subsp. lyrata] gi|297336190|gb|EFH66607.1| pfkB-type carbohydrate kinase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  354 bits (909), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 175/228 (76%), Positives = 198/228 (86%), Gaps = 2/228 (0%)

Query: 14  QAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSP 73
           +A L+LGLQPAALID+VA VDWSLLDQIPG+RGGSI V  +ELEHIL+E+ THI    +P
Sbjct: 11  EAPLVLGLQPAALIDNVAPVDWSLLDQIPGDRGGSIAVQKDELEHILNELDTHI--SVAP 68

Query: 74  IKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPT 133
           +K +AGGSVTNT+RGLSVGFGV  G+IGAYGDD+QGQLFV+NM FSGV +SRLR K+G T
Sbjct: 69  LKKMAGGSVTNTVRGLSVGFGVATGIIGAYGDDEQGQLFVTNMGFSGVSISRLRKKKGST 128

Query: 134 GQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLVLRFGMFNFEVIQAAIRIA 193
            QCVCLVD SGNRTMRPCLS+AVKIQADEL  ED  GSKWLVLR+ + N EVIQAAIR A
Sbjct: 129 AQCVCLVDDSGNRTMRPCLSSAVKIQADELSKEDFTGSKWLVLRYAVLNLEVIQAAIRFA 188

Query: 194 KQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR 241
           KQEGLSVSMDLASFEMVRN R+ L QLLESG++DLCFANEDEAAEL+R
Sbjct: 189 KQEGLSVSMDLASFEMVRNSRSELRQLLESGNIDLCFANEDEAAELLR 236

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449469961|ref|XP_004152687.1| PREDICTED: uncharacterized sugar kinase slr0537-like [Cucumis sativus] gi|449520038|ref|XP_004167041.1| PREDICTED: uncharacterized sugar kinase slr0537-like [Cucumis sativus]

 Score =  351 bits (901), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 173/246 (70%), Positives = 209/246 (84%), Gaps = 5/246 (2%)

Query: 1   MGAEHLIINREASQAA-LILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHI 59
           MGAE L+     S+A+ LILGLQPAALIDHV+RVD SLLD+IPG+RGGS+PV +EELE+I
Sbjct: 1   MGAEPLLHTVNDSEASPLILGLQPAALIDHVSRVDSSLLDRIPGDRGGSMPVGMEELENI 60

Query: 60  LSEVKTHILDEP----SPIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSN 115
           L EVK++IL  P    +P+KTIAGGSV NTIRGLS GFG+ CG+IGA GDD+QG+LFVSN
Sbjct: 61  LREVKSYILSSPDDLTTPVKTIAGGSVANTIRGLSAGFGISCGIIGACGDDEQGKLFVSN 120

Query: 116 MQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLV 175
           M   GV++SRLRM +GPT QCVCLVDA GNRTMRP LS+AVK+Q +EL  +D KGSKWLV
Sbjct: 121 MSSHGVNLSRLRMIKGPTAQCVCLVDALGNRTMRPSLSSAVKVQGNELTRDDFKGSKWLV 180

Query: 176 LRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDE 235
           +R+ +FN EVI+AA+++AKQE + VS+DLASFEMVR+FR PLLQLLESGD+DLCFANEDE
Sbjct: 181 MRYSIFNIEVIEAAVKMAKQEKVFVSLDLASFEMVRDFRLPLLQLLESGDIDLCFANEDE 240

Query: 236 AAELVR 241
           A EL+R
Sbjct: 241 AKELIR 246

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356564288|ref|XP_003550387.1| PREDICTED: uncharacterized sugar kinase slr0537-like [Glycine max]

 Score =  348 bits (894), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 178/253 (70%), Positives = 203/253 (80%), Gaps = 12/253 (4%)

Query: 1   MGAEHLIINREA---SQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELE 57
           MGAE L  N  A   +QA  +LGLQP+AL+DHVARVDWSLLDQIPGE GGSIPV + ELE
Sbjct: 1   MGAEPLSKNEVALAQTQAPFVLGLQPSALVDHVARVDWSLLDQIPGEHGGSIPVELGELE 60

Query: 58  HILSEVKTHIL--------DEPSP-IKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQ 108
           HIL EVK HI+        D PS  IKT+AGGSV NTIRGLS GFG+  G+IGA GDD+Q
Sbjct: 61  HILREVKIHIVSCHDNDDDDYPSSHIKTLAGGSVANTIRGLSNGFGISSGIIGACGDDEQ 120

Query: 109 GQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDV 168
           G+LF  NM  +GVD+SRLR K+G T QCVCLVD  GNRTMRPCLSNAVK+QA+EL  ED 
Sbjct: 121 GKLFDHNMSSNGVDLSRLRKKKGHTAQCVCLVDDLGNRTMRPCLSNAVKVQAEELAKEDF 180

Query: 169 KGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDL 228
           KGSKWLVLR+ + N EVIQAAI +AKQEGL VS+DLASFEMVRNF+ PLL+LLESG++DL
Sbjct: 181 KGSKWLVLRYAILNLEVIQAAILLAKQEGLLVSLDLASFEMVRNFKQPLLKLLESGNIDL 240

Query: 229 CFANEDEAAELVR 241
           CFANEDEA EL+R
Sbjct: 241 CFANEDEATELLR 253

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	241
TAIR|locus:2013094	355	AT1G19600 [Arabidopsis thalian	0.937	0.636	0.75	6e-87
TIGR_CMR|DET_0711	328	DET_0711 "carbohydrate kinase,	0.398	0.292	0.368	3.9e-07
TIGR_CMR|SPO_3582	328	SPO_3582 "kinase, pfkB family"	0.850	0.625	0.245	3.6e-06
UNIPROTKB|P0AEW6	434	gsk "Gsk" [Escherichia coli K-	0.883	0.490	0.277	6.8e-05
TAIR|locus:2137782	471	NARA5 "GENES NECESSARY FOR THE	0.875	0.447	0.234	0.00039

TAIR|locus:2013094 AT1G19600 [Arabidopsis thaliana (taxid:3702)]

 Score = 869 (311.0 bits), Expect = 6.0e-87, P = 6.0e-87
 Identities = 171/228 (75%), Positives = 196/228 (85%)

Query:    14 QAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSP 73
             +A L+LGLQPAALID+VA VDWSLLDQIPG+RGGSI V  +ELEH+L E+  HI    +P
Sbjct:    11 EAPLVLGLQPAALIDNVAPVDWSLLDQIPGDRGGSIAVQKDELEHMLKELDAHI--SVAP 68

Query:    74 IKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPT 133
             +K +AGGSVTNT+RGLSVGFGV  G+IGAYGDD+QGQLFVSNM FSGV +SRLR K+G T
Sbjct:    69 LKKMAGGSVTNTVRGLSVGFGVATGIIGAYGDDEQGQLFVSNMGFSGVSISRLRKKKGST 128

Query:   134 GQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLVLRFGMFNFEVIQAAIRIA 193
              QCVCLVD SGNRTMRPCLS+AVKIQADEL  ED  GSKWLVLR+ + N +VIQAAIR A
Sbjct:   129 AQCVCLVDDSGNRTMRPCLSSAVKIQADELSKEDFTGSKWLVLRYAVLNLQVIQAAIRFA 188

Query:   194 KQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR 241
             KQEGLSVS+DLASFEMVRN ++ L QLLESG++DLCFANEDEAAEL+R
Sbjct:   189 KQEGLSVSLDLASFEMVRNSKSELRQLLESGNIDLCFANEDEAAELLR 236

GO:0005737 "cytoplasm" evidence=ISM

GO:0016301 "kinase activity" evidence=ISS

TIGR_CMR|DET_0711 DET_0711 "carbohydrate kinase, PfkB family" [Dehalococcoides ethenogenes 195 (taxid:243164)]

 Score = 138 (53.6 bits), Expect = 3.9e-07, P = 3.9e-07
 Identities = 38/103 (36%), Positives = 56/103 (54%)

Query:    47 GSIPVA-IEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGD 105
             G++ V  I  +E IL + +  + +  S      GGS  NTI GLS   G+ CG IGA G+
Sbjct:    12 GAVHVDHIYTVEQILHDGECVVTESAS----FPGGSGANTIHGLS-RLGLKCGFIGAVGN 66

Query:   106 DQQGQLFVSNMQFSGVDVSRLRMKR-GPTGQCVCLVDASGNRT 147
             D  G L +S+ + +G+D   L +K    TG  V L ++SG R+
Sbjct:    67 DPDGNLLISDFENAGIDNRYLLVKNEAQTGSVVSLSESSGRRS 109

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0019200 "carbohydrate kinase activity" evidence=ISS

TIGR_CMR|SPO_3582 SPO_3582 "kinase, pfkB family" [Ruegeria pomeroyi DSS-3 (taxid:246200)]

 Score = 130 (50.8 bits), Expect = 3.6e-06, P = 3.6e-06
 Identities = 54/220 (24%), Positives = 93/220 (42%)

Query:    25 ALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTN 84
             A++D +++ D S LD +  E+G    +  E  E + + +K  +    +P     GGSV N
Sbjct:    12 AVVDVISQADDSFLDLMGIEKGIMQLIEQERGEVLYASMKERV---QTP-----GGSVAN 63

Query:    85 TIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVD-VSRLRMKRGPTGQCVCLVDAS 143
             TI G     G+    IG   DD  G  +   M   G+D V+        T + +  V   
Sbjct:    64 TIAGAGA-LGLDTAFIGRVRDDALGHFYADAMNEGGIDFVNPPVAGELATSRSMIFVSPD 122

Query:   144 GNRTMRPCLSNAVKIQADELIAEDVKGSKWLVLRFGMFNFEVIQAAIRIA----KQEGLS 199
             G R+M   L  +  + + ++  E    +K + L   +F+ +  ++A R A    +  G  
Sbjct:   123 GERSMNTYLGISTTLSSADVPQEVTGNAKLMFLEGYLFDHDAGKSAFREAARATRAAGGK 182

Query:   200 VSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAEL 239
               + ++    V   R   L L++  D+D    NE E   L
Sbjct:   183 AGIAISDPFCVDRHRADFLSLIQH-DLDFVIGNEAEIQSL 221

GO:0008152 "metabolic process" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

UNIPROTKB|P0AEW6 gsk "Gsk" [Escherichia coli K-12 (taxid:83333)]

 Score = 121 (47.7 bits), Expect = 6.8e-05, P = 6.8e-05
 Identities = 68/245 (27%), Positives = 107/245 (43%)

Query:    13 SQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPS 72
             + AA ++G+    L+D  A+VD   +++     G S+ +  +  E +  E+K   L    
Sbjct:    31 TSAAWVVGIDQT-LVDIEAKVDDEFIERYGLSAGHSLVIEDDVAEALYQELKQKNLITHQ 89

Query:    73 PIKTIAGGSVTNTIRGLSVG-------FGVPCGLI--GAYGDDQQGQLFVSNMQFSGVDV 123
                  AGG++ NT+   SV         GV C  I  G+Y        ++ N   S  D+
Sbjct:    90 ----FAGGTIGNTMHNYSVLADDRSVLLGVMCSNIEIGSYA-----YRYLCNTS-SRTDL 139

Query:   124 SRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDV-KGSKWLVLRFGMFN 182
             + L+   GP G+C  L+  SG RT      +  +++A E I EDV  G+  LVL   +  
Sbjct:   140 NYLQGVDGPIGRCFTLIGESGERTFAISPGHMNQLRA-ESIPEDVIAGASALVLTSYLVR 198

Query:   183 F-------EVIQAAIRIAKQEGLSVSMDLAS-FEMVRNFRTPLLQLLESGDVDLCFANED 234
                     E    AI  AK+  + V + L + F +  N +    Q L+   V +   NED
Sbjct:   199 CKPGEPMPEATMKAIEYAKKYNVPVVLTLGTKFVIAENPQW-WQQFLKD-HVSILAMNED 256

Query:   235 EAAEL 239
             EA  L
Sbjct:   257 EAEAL 261

GO:0032264 "IMP salvage" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008906 "inosine kinase activity" evidence=IEA;IDA

TAIR|locus:2137782 NARA5 "GENES NECESSARY FOR THE ACHIEVEMENT OF RUBISCO ACCUMULATION 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 115 (45.5 bits), Expect = 0.00039, P = 0.00039
 Identities = 54/230 (23%), Positives = 93/230 (40%)

Query:    18 ILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTI 77
             +LGL  A ++D    VD   L ++  E+G    +  EE   +L       +D  S  K  
Sbjct:   123 VLGLGQA-MVDFSGVVDDEFLKKLGLEKGTRKLINHEERGKLLQA-----MDGCS-YKAA 175

Query:    78 AGGSVTNTIRGLS-VGFGVPC------GLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKR 130
             AGGS++NT+  L+ +G    C       + G+ G D  G  + + ++ + V+     +K 
Sbjct:   176 AGGSLSNTLVALARLGSQSICDRPLNVAMAGSIGGDPLGSFYGTKLRRANVNFLSAPIKD 235

Query:   131 GPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLVLRFGMFNF----EVI 186
             G TG  + L      RTM      +  +  D  +A  +  +   V+   +F        I
Sbjct:   236 GTTGTVIVLTTPDAQRTMLAYQGTSSVVNYDSCLASLIAKTNVFVVEGYLFELPDTIRTI 295

Query:   187 QAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEA 236
               A   A + G  V++  +    +         ++     D+ FAN DEA
Sbjct:   296 TKACEEAHRNGALVAVTASDVSCIERHYDDFWDIV-GNYADIVFANSDEA 344


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.137   0.398    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      241       241   0.00094  113 3  11 22  0.41    33
                                                     32  0.44    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  602 (64 KB)
  Total size of DFA:  170 KB (2100 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  19.48u 0.19s 19.67t   Elapsed:  00:00:01
  Total cpu time:  19.48u 0.19s 19.67t   Elapsed:  00:00:01
  Start:  Fri May 10 05:23:06 2013   End:  Fri May 10 05:23:07 2013

GO:0005739 "mitochondrion" evidence=ISM

GO:0016301 "kinase activity" evidence=ISS

GO:0016773 "phosphotransferase activity, alcohol group as acceptor" evidence=IEA

GO:0009507 "chloroplast" evidence=IDA

GO:0015979 "photosynthesis" evidence=IMP

GO:0009902 "chloroplast relocation" evidence=RCA

GO:0010027 "thylakoid membrane organization" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0034660 "ncRNA metabolic process" evidence=RCA

GO:0042793 "transcription from plastid promoter" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.II.1879.1 pfkB-type carbohydrate kinase family protein (348 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	241
PLN02379	367	PLN02379, PLN02379, pfkB-type carbohydrate kinase	1e-155
cd01168	312	cd01168, adenosine_kinase, Adenosine kinase (AK) c	3e-54
COG0524	311	COG0524, RbsK, Sugar kinases, ribokinase family [C	4e-16
cd01166	294	cd01166, KdgK, 2-keto-3-deoxygluconate kinase (Kdg	1e-15
PLN02813	426	PLN02813, PLN02813, pfkB-type carbohydrate kinase	1e-14
pfam00294	298	pfam00294, PfkB, pfkB family carbohydrate kinase	2e-13
PTZ00247	345	PTZ00247, PTZ00247, adenosine kinase; Provisional	5e-10
cd01174	292	cd01174, ribokinase, Ribokinase catalyses the phos	2e-09
cd01942	279	cd01942, ribokinase_group_A, Ribokinase-like subgr	4e-07
cd01167	295	cd01167, bac_FRK, Fructokinases (FRKs) mainly from	7e-07
PLN02548	332	PLN02548, PLN02548, adenosine kinase	9e-07
PTZ00292	326	PTZ00292, PTZ00292, ribokinase; Provisional	3e-05
PRK09813	260	PRK09813, PRK09813, fructoselysine 6-kinase; Provi	3e-05
PRK15074	434	PRK15074, PRK15074, inosine/guanosine kinase; Prov	6e-05
TIGR02152	293	TIGR02152, D_ribokin_bact, ribokinase	2e-04
cd01940	264	cd01940, Fructoselysine_kinase_like, Fructoselysin	0.001
cd01945	284	cd01945, ribokinase_group_B, Ribokinase-like subgr	0.002

>gnl|CDD|178005 PLN02379, PLN02379, pfkB-type carbohydrate kinase family protein

 Score =  436 bits (1123), Expect = e-155
 Identities = 182/230 (79%), Positives = 202/230 (87%), Gaps = 3/230 (1%)

Query: 15  AALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHIL---DEP 71
             L+LGLQP AL+DHVARVDWSLLDQIPG+RGGSI V IEELEHIL EV  HIL   D+ 
Sbjct: 19  PPLVLGLQPVALVDHVARVDWSLLDQIPGDRGGSIRVTIEELEHILREVNAHILPSPDDL 78

Query: 72  SPIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG 131
           SPIKT+AGGSV NTIRGLS GFGV  G+IGA GDD+QG+LFVSNM FSGVD+SRLR K+G
Sbjct: 79  SPIKTMAGGSVANTIRGLSAGFGVSTGIIGACGDDEQGKLFVSNMGFSGVDLSRLRAKKG 138

Query: 132 PTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLVLRFGMFNFEVIQAAIR 191
           PT QCVCLVDA GNRTMRPCLS+AVK+QADEL  ED KGSKWLVLR+G +N EVI+AAIR
Sbjct: 139 PTAQCVCLVDALGNRTMRPCLSSAVKLQADELTKEDFKGSKWLVLRYGFYNLEVIEAAIR 198

Query: 192 IAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR 241
           +AKQEGLSVS+DLASFEMVRNFR+PLLQLLESG +DLCFANEDEA EL+R
Sbjct: 199 LAKQEGLSVSLDLASFEMVRNFRSPLLQLLESGKIDLCFANEDEARELLR 248

Length = 367

>gnl|CDD|238573 cd01168, adenosine_kinase, Adenosine kinase (AK) catalyzes the phosphorylation of ribofuranosyl-containing nucleoside analogues at the 5'-hydroxyl using ATP or GTP as the phosphate donor

 Score =  176 bits (448), Expect = 3e-54
 Identities = 73/217 (33%), Positives = 115/217 (52%), Gaps = 14/217 (6%)

Query: 25  ALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTN 84
           AL+D +A+VD + L+++  ++G  I   +EE E +L+++         P+K IAGGS  N
Sbjct: 10  ALVDILAQVDDAFLEKLGLKKGDMILADMEEQEELLAKL---------PVKYIAGGSAAN 60

Query: 85  TIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASG 144
           TIRG +   G     IG  GDD+ G   + +++ +GVD        GPTG C  LV    
Sbjct: 61  TIRGAAALGG-SAAFIGRVGDDKLGDFLLKDLRAAGVDTRYQVQPDGPTGTCAVLVTPDA 119

Query: 145 NRTMRPCLSNAVKIQADELIAEDVKGSKWLVLR--FGMFNFEVIQAAIRIAKQEGLSVSM 202
            RTM   L  A ++  D+L    +  +K+L L         E I  A   AK+ G+ +++
Sbjct: 120 ERTMCTYLGAANELSPDDLDWSLLAKAKYLYLEGYLLTVPPEAILLAAEHAKENGVKIAL 179

Query: 203 DLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAEL 239
           +L++  +V+ F+  LL+LL    VD+ F NE+EA  L
Sbjct: 180 NLSAPFIVQRFKEALLELL--PYVDILFGNEEEAEAL 214

The physiological function of AK is associated with the regulation of extracellular adenosine levels and the preservation of intracellular adenylate pools. Adenosine kinase is involved in the purine salvage pathway. . Length = 312

>gnl|CDD|223598 COG0524, RbsK, Sugar kinases, ribokinase family [Carbohydrate transport and metabolism]

 Score = 75.6 bits (186), Expect = 4e-16
 Identities = 52/171 (30%), Positives = 76/171 (44%), Gaps = 12/171 (7%)

Query: 75  KTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PT 133
           K   GG   N    L+   G    LIGA GDD  G+  +  ++  GVD S +    G  T
Sbjct: 33  KVAGGGKGANVAVALAR-LGAKVALIGAVGDDDFGEFLLEELRKEGVDTSHVVTDEGATT 91

Query: 134 GQCVCLVDASGNRTMRPCLSNA-VKIQADELIAEDVKGSKWLVLRFGMFNF----EVIQA 188
           G  + LVD  G RT       A + +  ++L  +++ G+  L             E + A
Sbjct: 92  GLALILVDEDGERTFVFYRGAAALLLTPEDLDEDELAGADVLH--ISGIQLEIPPEALLA 149

Query: 189 AIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAEL 239
           A+ +AK  G++VS DL +       R  L +LL     D+ F NE+EA  L
Sbjct: 150 ALELAKAAGVTVSFDL-NPRPALWDRELLEELLA--LADILFPNEEEAELL 197

Length = 311

>gnl|CDD|238571 cd01166, KdgK, 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP)

 Score = 73.8 bits (182), Expect = 1e-15
 Identities = 55/196 (28%), Positives = 84/196 (42%), Gaps = 24/196 (12%)

Query: 60  LSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFS 119
           LS      L++    +   GG+  N   GL+   G    L+ A GDD  G+  ++ ++  
Sbjct: 12  LSPPGGGRLEQADSFRKFFGGAEANVAVGLA-RLGHRVALVTAVGDDPFGRFILAELRRE 70

Query: 120 GVDVSRLRMKRG-PTGQCVCLVDASGNRTM---RPCLSNAVKIQADELIAEDVKGSKWLV 175
           GVD S +R+  G PTG     + A G R +   R   S A ++  ++L    + G+  L 
Sbjct: 71  GVDTSHVRVDPGRPTGLYFLEIGAGGERRVLYYRA-GSAASRLTPEDLDEAALAGADHLH 129

Query: 176 LRFGMFNF------EVIQAAIRIAKQEGLSVSMD------LASFEMVRNFRTPLLQLLES 223
           L  G+         E +  A+  AK  G++VS D      L S E  R     LL     
Sbjct: 130 LS-GITLALSESAREALLEALEAAKARGVTVSFDLNYRPKLWSAEEAREALEELLPY--- 185

Query: 224 GDVDLCFANEDEAAEL 239
             VD+   +E+EA  L
Sbjct: 186 --VDIVLPSEEEAEAL 199

KDG is the common intermediate product, that allows organisms to channel D-glucuronate and/or D-galacturinate into the glycolysis and therefore use polymers, like pectin and xylan as carbon sources. Length = 294

>gnl|CDD|215434 PLN02813, PLN02813, pfkB-type carbohydrate kinase family protein

 Score = 72.1 bits (177), Expect = 1e-14
 Identities = 56/234 (23%), Positives = 98/234 (41%), Gaps = 19/234 (8%)

Query: 18  ILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTI 77
           +LGL   A++D    VD   L+++  E+G    +  EE   +L  +      +    K  
Sbjct: 72  VLGLG-QAMVDFSGMVDDEFLERLGLEKGTRKVINHEERGKVLRAL------DGCSYKAS 124

Query: 78  AGGSVTNTIRGLS-VGFGVPCG------LIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKR 130
           AGGS++NT+  L+ +G     G      + G+ G D  G  + + ++ + V      +K 
Sbjct: 125 AGGSLSNTLVALARLGSQSAAGPALNVAMAGSVGSDPLGDFYRTKLRRANVHFLSQPVKD 184

Query: 131 GPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLVLRFGMFNF----EVI 186
           G TG  + L      RTM      +  +  D  +A  +  S+ LV+   ++      E I
Sbjct: 185 GTTGTVIVLTTPDAQRTMLSYQGTSSTVNYDSCLASAISKSRVLVVEGYLWELPQTIEAI 244

Query: 187 QAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELV 240
             A   A + G  V++  +    +   R     ++ +   D+ FAN DEA  L 
Sbjct: 245 AQACEEAHRAGALVAVTASDVSCIERHRDDFWDVMGNY-ADILFANSDEARALC 297

Length = 426

>gnl|CDD|215842 pfam00294, PfkB, pfkB family carbohydrate kinase

 Score = 68.2 bits (167), Expect = 2e-13
 Identities = 44/177 (24%), Positives = 66/177 (37%), Gaps = 22/177 (12%)

Query: 74  IKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMK-RGP 132
           ++  AGG+  N    L+   G     IG  GDD  G+  +  ++  GVD   + +     
Sbjct: 31  VEKGAGGAGANVAVALAR-LGGEVTFIGKVGDDNFGEFLLELLKKEGVDTDYVVIDEDTR 89

Query: 133 TGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLVLRFGMF----NFEVIQA 188
           TG  + LVD  G RT+      A  +  +EL  + ++ +  L L  G          ++ 
Sbjct: 90  TGLALILVDGDGERTINFYRGAAADLTPEELPEDLLENADILYL-SGSLPLPLPEATLEE 148

Query: 189 AIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLE-----SGDVDLCFANEDEAAELV 240
            I  AK  G              N R PL   LE         D+   NE+E   L 
Sbjct: 149 LIEAAKNGGT----------FDPNLRDPLWADLEVLLELLPLADILKPNEEELEALT 195

This family includes a variety of carbohydrate and pyrimidine kinases. Length = 298

>gnl|CDD|240328 PTZ00247, PTZ00247, adenosine kinase; Provisional

 Score = 58.1 bits (141), Expect = 5e-10
 Identities = 54/231 (23%), Positives = 95/231 (41%), Gaps = 34/231 (14%)

Query: 26  LIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNT 85
           L+D  A V    L++   E G +I    ++L  I  E    +   P  +  + GGS  NT
Sbjct: 15  LLDISAHVSDEFLEKYGLELGSAILAEEKQLP-IFEE----LESIP-NVSYVPGGSALNT 68

Query: 86  IRGL---------SVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQC 136
            R            V +      +G  GDD+  ++     +  GV++      + PTG C
Sbjct: 69  ARVAQWMLQAPKGFVCY------VGCVGDDRFAEILKEAAEKDGVEMLFEYTTKAPTGTC 122

Query: 137 -VCLVDASGNRTMRPCLSNAVKIQAD----ELIAEDVKGSKWLVLRFGMF---NFEVIQA 188
            V +      R++   L  A  + A+      + E +K ++   L  G F   +   +  
Sbjct: 123 AVLVCGK--ERSLVANLGAANHLSAEHMQSHAVQEAIKTAQLYYLE-GFFLTVSPNNVLQ 179

Query: 189 AIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAEL 239
             + A++ G    ++L++  + + F   LLQ+L    VD+ F NE+EA   
Sbjct: 180 VAKHARESGKLFCLNLSAPFISQFFFERLLQVLPY--VDILFGNEEEAKTF 228

Length = 345

>gnl|CDD|238579 cd01174, ribokinase, Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP

 Score = 56.4 bits (137), Expect = 2e-09
 Identities = 50/157 (31%), Positives = 73/157 (46%), Gaps = 28/157 (17%)

Query: 94  GVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRL-RMKRGPTGQCVCLVDASG-------- 144
           G    +IGA GDD  G   + N++  G+DVS +  +   PTG  V  VD SG        
Sbjct: 50  GARVAMIGAVGDDAFGDELLENLREEGIDVSYVEVVVGAPTGTAVITVDESGENRIVVVP 109

Query: 145 --NRTMRPCLSNAVKIQADELIAEDVKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSM 202
             N  + P   +A    A ELIA     +  L+L+  +   E + AA+R A++ G++V +
Sbjct: 110 GANGELTPADVDA----ALELIAA----ADVLLLQLEI-PLETVLAALRAARRAGVTVIL 160

Query: 203 DLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAEL 239
           + A        R    +LL    VD+   NE EAA L
Sbjct: 161 NPAP------ARPLPAELLAL--VDILVPNETEAALL 189

This reaction is the first step in the ribose metabolism. It traps ribose within the cell after uptake and also prepares the sugar for use in the synthesis of nucleotides and histidine, and for entry into the pentose phosphate pathway. Ribokinase is dimeric in solution. Length = 292

>gnl|CDD|238917 cd01942, ribokinase_group_A, Ribokinase-like subgroup A

 Score = 49.6 bits (119), Expect = 4e-07
 Identities = 44/166 (26%), Positives = 68/166 (40%), Gaps = 14/166 (8%)

Query: 79  GGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLR-MKRGPTGQCV 137
           GGS  NT   L+   G+  GL+ A G+D  G+L++  ++  GVD S +R +    TG   
Sbjct: 36  GGSAGNTAVALAK-LGLSPGLVAAVGEDFHGRLYLEELREEGVDTSHVRVVDEDSTGVAF 94

Query: 138 CLVDASGNRT--MRPCLSNAVKIQADELIAEDVKGSKWLVLRFGMFNFEVIQAAIRIAKQ 195
            L D   N+     P        + +     D  G    ++        +  A  R    
Sbjct: 95  ILTDGDDNQIAYFYP----GAMDELEPNDEADPDG-LADIVHLSSGPGLIELA--RELAA 147

Query: 196 EGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR 241
            G++VS D    E+ R     L ++LE    D+ F N+ EA  L  
Sbjct: 148 GGITVSFDP-GQELPRLSGEELEEILE--RADILFVNDYEAELLKE 190

Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. Length = 279

>gnl|CDD|238572 cd01167, bac_FRK, Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate

 Score = 48.8 bits (117), Expect = 7e-07
 Identities = 35/150 (23%), Positives = 57/150 (38%), Gaps = 22/150 (14%)

Query: 78  AGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRM-KRGPTGQC 136
            GG+  N    L+   G     IG  GDD+ G   +  ++ +GVD   ++     PT   
Sbjct: 27  PGGAPANVAVALA-RLGGKAAFIGKVGDDEFGDFLLETLKEAGVDTRGIQFDPAAPTTLA 85

Query: 137 VCLVDASGNRT---MRPCLSNAVKIQADELIAEDVKGSKWLVLRFGMFNF------EVIQ 187
              +DA G R+    R   ++   +   EL  + +  +  L   FG            + 
Sbjct: 86  FVTLDADGERSFEFYRGPAADL--LLDTELNPDLLSEADILH--FGSIALASEPSRSALL 141

Query: 188 AAIRIAKQEGLSVSMDLASFEMVRNFRTPL 217
             +  AK+ G+ +S D        N R PL
Sbjct: 142 ELLEAAKKAGVLISFDP-------NLRPPL 164

This is in contrast to FRKs [or ketohexokinases (KHKs)] from mammalia and halophilic archaebacteria, which phosphorylate fructose to fructose-1-phosphate. Length = 295

>gnl|CDD|178163 PLN02548, PLN02548, adenosine kinase

 Score = 48.6 bits (116), Expect = 9e-07
 Identities = 46/171 (26%), Positives = 74/171 (43%), Gaps = 15/171 (8%)

Query: 77  IAGGSVTNTIRGLSVGFGVP--CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTG 134
           IAGG+  N+IR       +P     +G  G D+ G+        +GV+V     +  PTG
Sbjct: 50  IAGGATQNSIRVAQWMLQIPGATSYMGCIGKDKFGEEMKKCATAAGVNVHYYEDESTPTG 109

Query: 135 QC-VCLVDASGNRTMRPCLSNAVKIQADELIAED----VKGSKWLVLRFGMF---NFEVI 186
            C V +V   G R++   LS A   + + L   +    V+ +K+  +  G F   + E I
Sbjct: 110 TCAVLVVG--GERSLVANLSAANCYKVEHLKKPENWALVEKAKFYYIA-GFFLTVSPESI 166

Query: 187 QAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAA 237
                 A     +  M+L++  +   F+  L++ L    VD  F NE EA 
Sbjct: 167 MLVAEHAAANNKTFMMNLSAPFICEFFKDQLMEALPY--VDFLFGNETEAR 215

Length = 332

>gnl|CDD|185541 PTZ00292, PTZ00292, ribokinase; Provisional

 Score = 44.0 bits (104), Expect = 3e-05
 Identities = 35/157 (22%), Positives = 55/157 (35%), Gaps = 23/157 (14%)

Query: 93  FGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSR-LRMKRGPTGQCVCLVD-ASGNRTMRP 150
            G    ++G  G D  G   + N + +GV+ S   R +   TG  +  VD  +GN  +  
Sbjct: 65  LGAKVAMVGMVGTDGFGSDTIKNFKRNGVNTSFVSRTENSSTGLAMIFVDTKTGNNEIVI 124

Query: 151 CLSNAVKIQADELIAEDVKGSKWLVLRFGMF-------NFEVIQAAIRIAKQEGLSVSMD 203
               A     + L  + V      +     +         E    A++ AK+ G     +
Sbjct: 125 I-PGA----NNALTPQMVDAQTDNIQNICKYLICQNEIPLETTLDALKEAKERGCYTVFN 179

Query: 204 LA---SFEMVRNFRTPLLQLLESGDVDLCFANEDEAA 237
            A       V   + P L+      V L   NE EAA
Sbjct: 180 PAPAPKLAEVEIIK-PFLKY-----VSLFCVNEVEAA 210

Length = 326

>gnl|CDD|182090 PRK09813, PRK09813, fructoselysine 6-kinase; Provisional

 Score = 44.0 bits (104), Expect = 3e-05
 Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 1/61 (1%)

Query: 75  KTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTG 134
           K  +GG+  N        +G+  G I   GDD  G     ++   GVD+S +  K G T 
Sbjct: 19  KAFSGGNAVNVAV-YCTRYGIQPGCITWVGDDDYGTKLKQDLARMGVDISHVHTKHGVTA 77

Query: 135 Q 135
           Q
Sbjct: 78  Q 78

Length = 260

>gnl|CDD|185033 PRK15074, PRK15074, inosine/guanosine kinase; Provisional

 Score = 43.1 bits (102), Expect = 6e-05
 Identities = 64/235 (27%), Positives = 101/235 (42%), Gaps = 37/235 (15%)

Query: 26  LIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTH--ILDEPSPIKTIAGGSVT 83
           L+D  A+VD   L++    +G S+ +  +  E +  E+K +  I  E       AGG++ 
Sbjct: 43  LVDIEAKVDDEFLERYGLSKGHSLVIEDDVAEALYQELKQNNLITHE------FAGGTIG 96

Query: 84  NTIRGLSVG-------FGVPCG--LIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTG 134
           NT+   SV         GV      IG+Y        ++ N   S  D++ L+   GP G
Sbjct: 97  NTLHNYSVLADDRSVLLGVMSSNIEIGSYA-----YRYLCNTS-SRTDLNYLQGVDGPIG 150

Query: 135 QCVCLVDASGNRT--MRPCLSNAVKIQADELIAEDV-KGSKWLVL-------RFGMFNFE 184
           +C  L+   G RT  + P   N ++    E I EDV  G+  LVL       + G    E
Sbjct: 151 RCFTLISEDGERTFAISPGHMNQLRP---ESIPEDVIAGASALVLTAYLVRCKPGEPMPE 207

Query: 185 VIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAEL 239
               AI  AK+  + V + L +  ++ +      + L+   V +   NEDEA  L
Sbjct: 208 ATMKAIEYAKKHNVPVVLTLGTKFVIEDNPQWWQEFLKE-HVSILAMNEDEAEAL 261

Length = 434

>gnl|CDD|233751 TIGR02152, D_ribokin_bact, ribokinase

 Score = 41.0 bits (97), Expect = 2e-04
 Identities = 42/152 (27%), Positives = 66/152 (43%), Gaps = 27/152 (17%)

Query: 100 IGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASG----------NRTM 148
           IG  GDD  G   + N++ +G+D   +   +  PTG     VD +G          N  +
Sbjct: 51  IGKVGDDAFGDELLENLKSNGIDTEYVGTVKDTPTGTAFITVDDTGENRIVVVAGANAEL 110

Query: 149 RPCLSNAVKIQADELIAEDVKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFE 208
            P         A+ LIAE    S  ++L+  +   E +  A +IAK+ G+ V ++ A   
Sbjct: 111 TP----EDIDAAEALIAE----SDIVLLQLEI-PLETVLEAAKIAKKHGVKVILNPAP-- 159

Query: 209 MVRNFRTPLLQLLESGDVDLCFANEDEAAELV 240
            +++    LL L     VD+   NE EA  L 
Sbjct: 160 AIKDLDDELLSL-----VDIITPNETEAEILT 186

This model describes ribokinase, an enzyme catalyzing the first step in ribose catabolism. The rbsK gene encoding ribokinase typically is found with ribose transport genes. Ribokinase belongs to the carbohydrate kinase pfkB family (pfam00294). In the wide gulf between the current trusted (360 bit) and noise (100 bit) cutoffs are a number of sequences, few of which are clustered with predicted ribose transport genes but many of which are currently annotated as if having ribokinase activity. Most likely some have this function and others do not [Energy metabolism, Sugars]. Length = 293

>gnl|CDD|238915 cd01940, Fructoselysine_kinase_like, Fructoselysine kinase-like

 Score = 38.9 bits (91), Expect = 0.001
 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)

Query: 94  GVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNR 146
           G     IGA G+D  G    S ++  GVD+S  R+K G       +    G+R
Sbjct: 36  GHESAYIGAVGNDDAGAHVRSTLKRLGVDISHCRVKEGENA-VADVELVDGDR 87

Fructoselysine is a fructoseamine formed by glycation, a non-enzymatic reaction of glucose with a primary amine followed by an Amadori rearrangement, resulting in a protein that is modified at the amino terminus and at the lysine side chains. Fructoseamines are typically metabolized by fructoseamine-3-kinase, especially in higher eukaryotes. In E. coli, fructoselysine kinase has been shown in vitro to catalyze the phosphorylation of fructoselysine. It is proposed that fructoselysine is released from glycated proteins during human digestion and is partly metabolized by bacteria in the hind gut using a protein such as fructoselysine kinase. This family is found only in bacterial sequences, and its oligomeric state is currently unknown. Length = 264

>gnl|CDD|238920 cd01945, ribokinase_group_B, Ribokinase-like subgroup B

 Score = 38.4 bits (90), Expect = 0.002
 Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 3/89 (3%)

Query: 75  KTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTG 134
             I GG+  N    ++   G    LIG  GDD  G+L ++ +   GVD S + +  G   
Sbjct: 32  AVIGGGNAANAAVAVA-RLGGQARLIGVVGDDAIGRLILAELAAEGVDTSFIVVAPGARS 90

Query: 135 QCVCLVDASGNRTMRPCLSNAVKIQADEL 163
               + D +G+R        A+  QA   
Sbjct: 91  PISSITDITGDR--ATISITAIDTQAAPD 117

Found in bacteria and plants, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. . Length = 284

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	241
PRK15074	434	inosine/guanosine kinase; Provisional	100.0
PLN02379	367	pfkB-type carbohydrate kinase family protein	100.0
PLN02813	426	pfkB-type carbohydrate kinase family protein	100.0
PTZ00247	345	adenosine kinase; Provisional	99.98
cd01168	312	adenosine_kinase Adenosine kinase (AK) catalyzes t	99.98
KOG2854	343	consensus Possible pfkB family carbohydrate kinase	99.98
PLN02548	332	adenosine kinase	99.96
PRK11142	306	ribokinase; Provisional	99.96
cd01174	292	ribokinase Ribokinase catalyses the phosphorylatio	99.96
PLN02967	581	kinase	99.95
PTZ00292	326	ribokinase; Provisional	99.95
PLN02323	330	probable fructokinase	99.95
PLN02543	496	pfkB-type carbohydrate kinase family protein	99.95
cd01944	289	YegV_kinase_like YegV-like sugar kinase. Found onl	99.95
COG0524	311	RbsK Sugar kinases, ribokinase family [Carbohydrat	99.94
cd01942	279	ribokinase_group_A Ribokinase-like subgroup A. Fou	99.94
PRK09850	313	pseudouridine kinase; Provisional	99.94
PLN02341	470	pfkB-type carbohydrate kinase family protein	99.94
cd01166	294	KdgK 2-keto-3-deoxygluconate kinase (KdgK) phospho	99.94
cd01939	290	Ketohexokinase Ketohexokinase (fructokinase, KHK)	99.94
cd01945	284	ribokinase_group_B Ribokinase-like subgroup B. Fou	99.93
TIGR02152	293	D_ribokin_bact ribokinase. This model describes ri	99.93
cd01167	295	bac_FRK Fructokinases (FRKs) mainly from bacteria	99.93
cd01941	288	YeiC_kinase_like YeiC-like sugar kinase. Found in	99.92
cd01947	265	Guanosine_kinase_like Guanosine kinase-like sugar	99.92
PRK09954	362	putative kinase; Provisional	99.92
PF00294	301	PfkB: pfkB family carbohydrate kinase; InterPro: I	99.91
TIGR03828	304	pfkB 1-phosphofructokinase. This enzyme acts in co	99.91
cd01943	328	MAK32 MAK32 kinase. MAK32 is a protein found prima	99.91
PRK09434	304	aminoimidazole riboside kinase; Provisional	99.91
cd01940	264	Fructoselysine_kinase_like Fructoselysine kinase-l	99.9
cd01172	304	RfaE_like RfaE encodes a bifunctional ADP-heptose	99.9
PRK09513	312	fruK 1-phosphofructokinase; Provisional	99.9
PRK10294	309	6-phosphofructokinase 2; Provisional	99.89
PRK13508	309	tagatose-6-phosphate kinase; Provisional	99.89
TIGR01231	309	lacC tagatose-6-phosphate kinase. This enzyme is p	99.89
TIGR02198	315	rfaE_dom_I rfaE bifunctional protein, domain I. Rf	99.88
TIGR03168	303	1-PFK hexose kinase, 1-phosphofructokinase family.	99.88
KOG2855	330	consensus Ribokinase [Carbohydrate transport and m	99.88
cd01164	289	FruK_PfkB_like 1-phosphofructokinase (FruK), minor	99.88
PRK09813	260	fructoselysine 6-kinase; Provisional	99.87
PRK11316	473	bifunctional heptose 7-phosphate kinase/heptose 1-	99.86
COG1105	310	FruK Fructose-1-phosphate kinase and related fruct	99.85
PLN02630	335	pfkB-type carbohydrate kinase family protein	99.85
cd01937	254	ribokinase_group_D Ribokinase-like subgroup D. Fou	99.81
cd01946	277	ribokinase_group_C Ribokinase-like subgroup C. Fou	99.8
KOG2947	308	consensus Carbohydrate kinase [Carbohydrate transp	99.8
COG2870	467	RfaE ADP-heptose synthase, bifunctional sugar kina	99.71
cd00287	196	ribokinase_pfkB_like ribokinase/pfkB superfamily:	99.65
KOG3009	614	consensus Predicted carbohydrate kinase, contains	99.11
PRK14039	453	ADP-dependent glucokinase; Provisional	97.22
TIGR00196	272	yjeF_cterm yjeF C-terminal region, hydroxyethylthi	97.2
cd01171	254	YXKO-related B.subtilis YXKO protein of unknown fu	96.92
PRK07105	284	pyridoxamine kinase; Validated	96.83
cd01170	242	THZ_kinase 4-methyl-5-beta-hydroxyethylthiazole (T	96.81
cd01173	254	pyridoxal_pyridoxamine_kinase Pyridoxal kinase pla	96.81
PRK12412	268	pyridoxal kinase; Reviewed	96.75
PRK08176	281	pdxK pyridoxal-pyridoxamine kinase/hydroxymethylpy	96.73
cd01169	242	HMPP_kinase 4-amino-5-hydroxymethyl-2-methyl-pyrim	96.64
TIGR00687	286	pyridox_kin pyridoxal kinase. ThiD and related pro	96.59
TIGR00097	254	HMP-P_kinase phosphomethylpyrimidine kinase. This	96.5
PRK06427	266	bifunctional hydroxy-methylpyrimidine kinase/ hydr	96.47
PF08543	246	Phos_pyr_kin: Phosphomethylpyrimidine kinase; Inte	96.35
TIGR00694	249	thiM hydroxyethylthiazole kinase. This model repre	96.32
PF02110	246	HK: Hydroxyethylthiazole kinase family; InterPro:	96.31
PRK12413	253	phosphomethylpyrimidine kinase; Provisional	96.29
PRK09355	263	hydroxyethylthiazole kinase; Validated	96.24
PRK05756	286	pyridoxamine kinase; Validated	95.9
COG2145	265	ThiM Hydroxyethylthiazole kinase, sugar kinase fam	95.82
cd01938	445	ADPGK_ADPPFK ADP-dependent glucokinase (ADPGK) and	95.8
PRK08573	448	phosphomethylpyrimidine kinase; Provisional	95.73
COG0351	263	ThiD Hydroxymethylpyrimidine/phosphomethylpyrimidi	95.71
PRK12616	270	pyridoxal kinase; Reviewed	95.71
PLN02978	308	pyridoxal kinase	95.6
PRK03979	463	ADP-specific phosphofructokinase; Provisional	95.53
PRK14038	453	ADP-dependent glucokinase; Provisional	95.47
PTZ00344	296	pyridoxal kinase; Provisional	95.38
PF04587	444	ADP_PFK_GK: ADP-specific Phosphofructokinase/Gluco	94.85
COG2240	281	PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coe	94.83
TIGR02045	446	P_fruct_ADP ADP-specific phosphofructokinase. Phos	94.23
PLN02898	502	HMP-P kinase/thiamin-monophosphate pyrophosphoryla	93.86
PRK09517	755	multifunctional thiamine-phosphate pyrophosphoryla	92.9
PRK14713	530	multifunctional hydroxymethylpyrimidine phosphokin	92.02
PTZ00347	504	phosphomethylpyrimidine kinase; Provisional	91.22
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	89.7
PTZ00493	321	phosphomethylpyrimidine kinase; Provisional	89.36
KOG2599	308	consensus Pyridoxal/pyridoxine/pyridoxamine kinase	88.67
COG1618	179	Predicted nucleotide kinase [Nucleotide transport	83.94
PRK10565	508	putative carbohydrate kinase; Provisional	83.16
KOG3974	306	consensus Predicted sugar kinase [Carbohydrate tra	81.83
PRK10076	213	pyruvate formate lyase II activase; Provisional	81.5

>PRK15074 inosine/guanosine kinase; Provisional

Probab=100.00  E-value=1.4e-36  Score=266.47  Aligned_cols=219  Identities=24%  Similarity=0.337  Sum_probs=189.5

Q ss_pred             CCeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcC
Q 026265           15 AALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFG   94 (241)
Q Consensus        15 ~~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG   94 (241)
                      .++|+++| |++||+.+.++++||+++.+++|.+++|+.++...+++.+...+    ......+||+++|+|++++ +||
T Consensus        33 ~~~v~g~G-NaLvDi~~~v~d~fL~~~~l~kg~m~li~~e~~~~l~~~l~~~~----~~~~~~~GGsaaNtA~~lA-rLG  106 (434)
T PRK15074         33 RTYIVGID-QTLVDIEAKVDDEFLERYGLSKGHSLVIEDDVAEALYQELKQNN----LITHEFAGGTIGNTLHNYS-VLA  106 (434)
T ss_pred             CCcEEEeC-CceeeEEEeeCHHHHHHcCCCCCceEecCHHHHHHHHHHHhhcc----ccccccCCCHHHHHHHHHH-HcC
Confidence            48999999 99999999999999999999999999999999999999886321    1146679999999999999 896


Q ss_pred             -CceeEEeeecCC-hhHHHHHHHHH--hCCceeeceeecCCCceeEEEEEcCCCCeeeeeCccccCCCCcccCChhhhCC
Q 026265           95 -VPCGLIGAYGDD-QQGQLFVSNMQ--FSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKG  170 (241)
Q Consensus        95 -~~~~~vg~vG~D-~~g~~i~~~l~--~~gvd~~~~~~~~~~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~~~~i~~  170 (241)
                       .++.|+|.||+| .+|+++++.|+  +.||++.++...+++|+.|+++++++|+|++++++|+...+++++++.+.+++
T Consensus       107 G~~~~fig~VGdDd~~G~~~~~~L~~~~~GVdt~~v~~~~~~TG~~~VlV~~dGeRt~~t~~GA~~~Lt~edld~~~i~~  186 (434)
T PRK15074        107 DDRSVLLGVMSSNIEIGSYAYRYLCNTSSRTDLNYLQGVDGPIGRCFTLISEDGERTFAISPGHMNQLRPESIPEDVIAG  186 (434)
T ss_pred             CCCeEEEEEeCCCHHHHHHHHHHhhhhhCCccCcceEEcCCCCEEEEEEECCCCCEEEEEecChhhcCChhHCCHhHhcc
Confidence             999999999999 69999999997  68999998876656899999999999999999999999999999998888999


Q ss_pred             ccEEEEE-eccc------cHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHh-hhcCCCccEEecCHHHHHhhhC
Q 026265          171 SKWLVLR-FGMF------NFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQ-LLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       171 ~~~v~~~-~~~~------~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~-~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      ++++|++ +.+.      ..+++.++++.|++.|++++||++...++...++.+.+ +++  ++|++++|++|++.|+|
T Consensus       187 a~ilyl~Gy~l~~~~~~~~~~a~~~al~~Ake~G~~VslD~s~~~~v~~~~~~~~e~l~~--~vDILf~NeeEa~~LtG  263 (434)
T PRK15074        187 ASALVLTAYLVRCKPGEPMPEATMKAIEYAKKHNVPVVLTLGTKFVIEDNPQWWQEFLKE--HVSILAMNEDEAEALTG  263 (434)
T ss_pred             CCEEEEeeeehhcccCCCcHHHHHHHHHHHHHcCCEEEEECcchhhccccHHHHHHHHHh--cCCEEEcCHHHHHHHhC
Confidence            9999999 5432      25778899999999999999999987654334444433 344  89999999999999875

>PLN02379 pfkB-type carbohydrate kinase family protein

Probab=100.00  E-value=1.6e-36  Score=263.21  Aligned_cols=226  Identities=80%  Similarity=1.263  Sum_probs=199.3

Q ss_pred             CCeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCC---CCCCCceeecCChHHHHHHHHHh
Q 026265           15 AALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHIL---DEPSPIKTIAGGSVTNTIRGLSV   91 (241)
Q Consensus        15 ~~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~GG~~~N~a~~la~   91 (241)
                      +++|++||+|++||+++.++++||+++.+++|.+++|+.++...+++++..+..   .+.......+||+++|++++++ 
T Consensus        19 ~~~v~g~g~nalvD~~~~v~~~~l~~~~~~kg~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~GGsa~N~a~~la-   97 (367)
T PLN02379         19 PPLVLGLQPVALVDHVARVDWSLLDQIPGDRGGSIRVTIEELEHILREVNAHILPSPDDLSPIKTMAGGSVANTIRGLS-   97 (367)
T ss_pred             CCcEEEEccccEEEEEEecCHHHHHHcCCCCcceeecCHHHHHHHHHHhhhcccccccccccceecCCCHHHHHHHHHH-
Confidence            578999988999999999999999999999999999999999999999864321   1123477889999999999998 


Q ss_pred             h-cCCceeEEeeecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEEEcCCCCeeeeeCccccCCCCcccCChhhhCC
Q 026265           92 G-FGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKG  170 (241)
Q Consensus        92 ~-LG~~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~~~~i~~  170 (241)
                      + ||.++.++|.||+|.+|+++++.|++.||++.++...+++|+.|+++++++|+|++..+.++...++++++..+.+++
T Consensus        98 ~~LG~~~~~ig~VG~D~~G~~~~~~L~~~GI~~~~~~~~~~~Tg~~~v~v~~dgert~~~~lg~~~~l~~~~~~~~~~~~  177 (367)
T PLN02379         98 AGFGVSTGIIGACGDDEQGKLFVSNMGFSGVDLSRLRAKKGPTAQCVCLVDALGNRTMRPCLSSAVKLQADELTKEDFKG  177 (367)
T ss_pred             HhcCCCEEEEEEeCCChhHHHHHHHHHHcCCCccCcccCCCCCceEEEEECCCCCccccCCccccccCChhHCCHHHHhc
Confidence            6 999999999999999999999999999999888766556899999999999999998877877788888888788999


Q ss_pred             ccEEEEEeccccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          171 SKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       171 ~~~v~~~~~~~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      ++|+|++|.+.+.+.+.++++.++++|+++++|+++..++.++++.+++++...++|++|+|++|++.|+|
T Consensus       178 ~~~v~v~~~~~~~~~~~~~~~~A~~~g~~v~lD~s~~~~v~~~r~~l~~ll~~~~vDilf~Ne~Ea~~l~~  248 (367)
T PLN02379        178 SKWLVLRYGFYNLEVIEAAIRLAKQEGLSVSLDLASFEMVRNFRSPLLQLLESGKIDLCFANEDEARELLR  248 (367)
T ss_pred             CCEEEEEcccCCHHHHHHHHHHHHHcCCEEEEeccchhhhhhhhHHHHHHhhcCCccEEEcCHHHHHHHhc
Confidence            99999996545778899999999999999999999887777888889988842389999999999998863

>PLN02813 pfkB-type carbohydrate kinase family protein

Probab=100.00  E-value=1.4e-33  Score=248.63  Aligned_cols=217  Identities=25%  Similarity=0.400  Sum_probs=188.8

Q ss_pred             CCeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcC
Q 026265           15 AALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFG   94 (241)
Q Consensus        15 ~~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG   94 (241)
                      .++|+++| ++++|+++.++++|++++.+|++++++|+.++...+++.+..      ......+||+++|+|++++ |||
T Consensus        69 ~~~vl~iG-~~~vDi~~~v~~~fl~~~~lp~~~~~~i~~~~~~~l~e~~~~------~~~~~~~GG~~~N~Avala-rLG  140 (426)
T PLN02813         69 RWDVLGLG-QAMVDFSGMVDDEFLERLGLEKGTRKVINHEERGKVLRALDG------CSYKASAGGSLSNTLVALA-RLG  140 (426)
T ss_pred             cceEEEeC-CceeEEEEecCHHHHHHcCCCcCcccccCHHHHHHHHHHhhc------cCceEecCcHHHHHHHHHH-Hhc
Confidence            48999999 999999999999999999999999999999999888887653      3678999999999999999 899


Q ss_pred             --------CceeEEeeecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEEEcCCCCeeeeeCccccCCCCcccCChh
Q 026265           95 --------VPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAE  166 (241)
Q Consensus        95 --------~~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~~~  166 (241)
                              .++.|+|.||+|.+|+++++.|++.||++.++.+.+.+|+.++++++++|+|+++.+.+++..++.+++..+
T Consensus       141 ~~~~~~~~~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~~~~~~~~Tg~~~ilv~~~gertii~~~Ga~~~l~~~~~~~~  220 (426)
T PLN02813        141 SQSAAGPALNVAMAGSVGSDPLGDFYRTKLRRANVHFLSQPVKDGTTGTVIVLTTPDAQRTMLSYQGTSSTVNYDSCLAS  220 (426)
T ss_pred             cccccCCCCcEEEEEEeCCChHHHHHHHHHHHcCCcccceecCCCCceEEEEEEcCCCCceeeeccCchhhCCccccCHH
Confidence                    799999999999999999999999999998887665689999999999999999999998877877777667


Q ss_pred             hhCCccEEEEE-ecc-cc--HHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhh-cCCCccEEecCHHHHHhhhC
Q 026265          167 DVKGSKWLVLR-FGM-FN--FEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLL-ESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       167 ~i~~~~~v~~~-~~~-~~--~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l-~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      .+++++++|++ +.+ .+  .+.+.++++.+++.|++++||+++..+...+++.+++.+ +  ++|++++|++|++.|+|
T Consensus       221 ~i~~adiv~l~g~~~~~~~~~~~~~~~~~~ak~~g~~v~~d~s~~~~~~~~~~~l~~~ll~--~vDil~~Ne~Ea~~l~g  298 (426)
T PLN02813        221 AISKSRVLVVEGYLWELPQTIEAIAQACEEAHRAGALVAVTASDVSCIERHRDDFWDVMGN--YADILFANSDEARALCG  298 (426)
T ss_pred             HHhcCCEEEEEeeecCCCchHHHHHHHHHHHHHcCCEEEEECCCcchhhhhHHHHHHHHHh--cCCEEEeCHHHHHHHhC
Confidence            78999999998 432 23  367888999999999999999987543334566666655 5  89999999999999875

>PTZ00247 adenosine kinase; Provisional

Probab=99.98  E-value=2.4e-30  Score=223.49  Aligned_cols=217  Identities=24%  Similarity=0.341  Sum_probs=176.5

Q ss_pred             CCCeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhc
Q 026265           14 QAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGF   93 (241)
Q Consensus        14 ~~~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~L   93 (241)
                      ...+|+++| ++++|++++++++|+.++.+.+|+..+++. ....+..++..     ..+....+||+++|+|++++ +|
T Consensus         4 ~~~~i~~iG-~~~~D~~~~v~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~-----~~~~~~~~GG~~~N~A~~la-~l   75 (345)
T PTZ00247          4 APKKLLGFG-NPLLDISAHVSDEFLEKYGLELGSAILAEE-KQLPIFEELES-----IPNVSYVPGGSALNTARVAQ-WM   75 (345)
T ss_pred             CCceEEEEC-CceEEEEEeeCHHHHHHcCCCCCceeechH-HHHHHHHHHHh-----ccCceecCCCHHHHHHHHHH-HH
Confidence            357899999 999999999999999998667887777663 23333333221     13678999999999999999 78


Q ss_pred             C---C-ceeEEeeecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEEEcCCCCeeeeeCccccCCCCcccCCh----
Q 026265           94 G---V-PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA----  165 (241)
Q Consensus        94 G---~-~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~~----  165 (241)
                      |   . ++.|+|.||+|.+|+++++.|++.||++.++...+.+|++++++++ +|+|+++.+++++..+++++++.    
T Consensus        76 g~~g~~~v~~ig~vG~D~~G~~i~~~l~~~GVd~~~~~~~~~~Tg~~~i~v~-~~~r~~~~~~ga~~~l~~~~i~~~~~~  154 (345)
T PTZ00247         76 LQAPKGFVCYVGCVGDDRFAEILKEAAEKDGVEMLFEYTTKAPTGTCAVLVC-GKERSLVANLGAANHLSAEHMQSHAVQ  154 (345)
T ss_pred             hcCCCCcEEEEEEeccchhHHHHHHHHHHcCCeeeccccCCCCcEEEEEEEc-CCCcccccCcchhhcCChHHcCcHHHH
Confidence            6   4 8999999999999999999999999999887644448999999997 48999998899888898888764    


Q ss_pred             hhhCCccEEEEE-ecc-ccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          166 EDVKGSKWLVLR-FGM-FNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       166 ~~i~~~~~v~~~-~~~-~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      +.+++++++|++ +.+ .+.+.+..+++.+++.|+++++|++++......++.+.++++  ++|++++|++|++.|+|
T Consensus       155 ~~l~~~~~v~~~g~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~~~~~l~--~~Dil~~N~~Ea~~l~g  230 (345)
T PTZ00247        155 EAIKTAQLYYLEGFFLTVSPNNVLQVAKHARESGKLFCLNLSAPFISQFFFERLLQVLP--YVDILFGNEEEAKTFAK  230 (345)
T ss_pred             HHHhhCCEEEEEEEEecccHHHHHHHHHHHHHcCCEEEEECCcHHHHHHHHHHHHHHHh--hCCEEEeCHHHHHHHhh
Confidence            368899999999 322 367889999999999999999998755322233455777888  99999999999999875

>cd01168 adenosine_kinase Adenosine kinase (AK) catalyzes the phosphorylation of ribofuranosyl-containing nucleoside analogues at the 5'-hydroxyl using ATP or GTP as the phosphate donor

Probab=99.98  E-value=2.9e-30  Score=219.92  Aligned_cols=213  Identities=36%  Similarity=0.565  Sum_probs=177.3

Q ss_pred             CeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCC
Q 026265           16 ALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGV   95 (241)
Q Consensus        16 ~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~   95 (241)
                      .+|+++| ++++|+++++++..+......+|.+.+.+.+........         .+....+||+++|+|++++ |||.
T Consensus         2 ~~v~~vG-~~~~D~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~GG~~~N~A~~la-~LG~   70 (312)
T cd01168           2 YDVLGLG-NALVDILAQVDDAFLEKLGLKKGDMILADMEEQEELLAK---------LPVKYIAGGSAANTIRGAA-ALGG   70 (312)
T ss_pred             ceEEEEC-CCeEEEEEecCHHHHHHcCCCCCceeecCHHHHHHHHHh---------cCccccCCCHHHHHHHHHH-HhcC
Confidence            4699999 999999999977666666556677776655555444322         1467899999999999999 8999


Q ss_pred             ceeEEeeecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEEEcCCCCeeeeeCccccCCCCcccCChhhhCCccEEE
Q 026265           96 PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLV  175 (241)
Q Consensus        96 ~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~~~~i~~~~~v~  175 (241)
                      ++.++|.+|+|.+|+.+++.|++.||++.++...+.+|+.++++++++|+|+++.++++...++++++..+.+++++++|
T Consensus        71 ~~~~i~~vG~D~~g~~i~~~l~~~GV~~~~~~~~~~~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~~l~~~~~v~  150 (312)
T cd01168          71 SAAFIGRVGDDKLGDFLLKDLRAAGVDTRYQVQPDGPTGTCAVLVTPDAERTMCTYLGAANELSPDDLDWSLLAKAKYLY  150 (312)
T ss_pred             CeEEEEEeccChhHHHHHHHHHHCCCccccccCCCCCceEEEEEEcCCCceeeecccchhhcCChhHCCHHHHccCCEEE
Confidence            99999999999999999999999999999887654589999999998899999988888888998888877899999999


Q ss_pred             EE-ecc-ccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          176 LR-FGM-FNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       176 ~~-~~~-~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      ++ +.. .+.+.+..+++.+++.|.++++|++++.....+++.+.++++  ++|++++|++|++.|+|
T Consensus       151 ~~~~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~~~~~l~--~~d~l~~n~~E~~~l~~  216 (312)
T cd01168         151 LEGYLLTVPPEAILLAAEHAKENGVKIALNLSAPFIVQRFKEALLELLP--YVDILFGNEEEAEALAE  216 (312)
T ss_pred             EEEEecCCCHHHHHHHHHHHHHcCCEEEEeCCcHHHHHHHHHHHHHHHh--hCCEEEeCHHHHHHHhC
Confidence            99 322 345888899999999999999999754322334555778887  99999999999999875

The physiological function of AK is associated with the regulation of extracellular adenosine levels and the preservation of intracellular adenylate pools. Adenosine kinase is involved in the purine salvage pathway.

>KOG2854 consensus Possible pfkB family carbohydrate kinase [Carbohydrate transport and metabolism]

Probab=99.98  E-value=7.7e-31  Score=215.38  Aligned_cols=216  Identities=27%  Similarity=0.356  Sum_probs=190.1

Q ss_pred             CCCeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhc
Q 026265           14 QAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGF   93 (241)
Q Consensus        14 ~~~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~L   93 (241)
                      ++.-.+++| |+++|+.+.++++||++|++..|++.+++.+.... +.++.     +..+....+||++.|++++++ ++
T Consensus         5 ~E~il~G~g-npLLD~~a~Vd~~~L~KygL~~n~ail~d~~~~~~-~~E~~-----~~~~~~~~AGGs~qNt~R~aq-~~   76 (343)
T KOG2854|consen    5 PEGILVGLG-NPLLDISAVVDDEFLDKYGLKLNDAILADDKHLGL-FDELM-----EGFNVKYSAGGSAQNTLRIAQ-WL   76 (343)
T ss_pred             ccceeeccC-ccceeeeeccCHHHHHHcCCCCCcceecchhhHHH-HHHHh-----hcccEEecCCchhHHHHHHHH-HH
Confidence            455578899 99999999999999999999999999988775444 43332     234899999999999999999 57


Q ss_pred             CC---ceeEEeeecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEEEcCCCCeeeeeCccccCCCCcccCCh----h
Q 026265           94 GV---PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA----E  166 (241)
Q Consensus        94 G~---~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~~----~  166 (241)
                      +-   .+.|+|.||.|.+|+.+++.+++.||++++....+.+||+|.++++.++ |+++.+.++...++.++++.    .
T Consensus        77 ~~~p~~~~f~GsvG~Dk~ge~l~~~~~~aGv~~~yq~~~d~~TGtCavli~~~n-RSL~anLgAAn~f~~dhl~~~~~~~  155 (343)
T KOG2854|consen   77 LQQPGATVFFGSVGKDKFGELLKSKARAAGVNVHYQVKEDGPTGTCAVLITGDN-RSLCANLGAANCFKVDHLDKEENWA  155 (343)
T ss_pred             ccCCCceEEEeeccCchHHHHHHHHHHhcCceEEEEeccCCCCceEEEEEeCCC-cchhhccchhhccCHHHhcchhhhh
Confidence            65   8999999999999999999999999999998888889999999998665 99999999999999998853    3


Q ss_pred             hhCCccEEEEE-ecc-ccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhh
Q 026265          167 DVKGSKWLVLR-FGM-FNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELV  240 (241)
Q Consensus       167 ~i~~~~~v~~~-~~~-~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~  240 (241)
                      .+++++++|+. +.+ +++++++.+.+.+.+...+.+++++.+++.+.+.+.+.++++  ++||+|+|++||+.+.
T Consensus       156 lveka~v~yv~Gffltv~p~ai~~v~qh~~e~~r~~~lnlsapfI~q~~~~~l~~v~~--y~DiifgNe~EA~af~  229 (343)
T KOG2854|consen  156 LVEKAKVFYVAGFFLTVSPDAIRKVAQHAAENNRVFTLNLSAPFISQFFKDALDKVLP--YADIIFGNEDEAAAFA  229 (343)
T ss_pred             hhhheeEEEEEEEEEEeChHHHHHHHHHHHHhcchhheeccchhHHHHHHHHHHhhcC--cceEEEcCHHHHHHHH
Confidence            78999999999 433 568999999999999999899999999988888888889998  9999999999999875

>PLN02548 adenosine kinase

Probab=99.96  E-value=2.8e-27  Score=203.34  Aligned_cols=210  Identities=25%  Similarity=0.309  Sum_probs=164.6

Q ss_pred             ecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHH---HhhcCCce
Q 026265           21 LQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGL---SVGFGVPC   97 (241)
Q Consensus        21 iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~l---a~~LG~~~   97 (241)
                      +| |+++|+++.+++++|+++.+++|.+++..... .....+.     +........+||++.|++..+   + ++|.++
T Consensus         1 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~-----~~~~~~~~~~GG~~~Nva~~a~~l~-~lg~~~   72 (332)
T PLN02548          1 MG-NPLLDISAVVDQDFLDKYDVKLNNAILAEEKH-LPMYDEL-----ASKYNVEYIAGGATQNSIRVAQWML-QIPGAT   72 (332)
T ss_pred             CC-CceeEEEEecCHHHHHHcCCCCCceeechHHH-HHHHHHH-----hccCCceecCCcHHHHHHHHHHHHh-cCCCcE
Confidence            57 99999999999999999999999999643222 1111111     123478899999999986544   5 569999


Q ss_pred             eEEeeecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEEEcCCCCeeeeeCccccCCCCcccCC----hhhhCCccE
Q 026265           98 GLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELI----AEDVKGSKW  173 (241)
Q Consensus        98 ~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~----~~~i~~~~~  173 (241)
                      .|+|.+|+|.+|+.+++.|++.||+++++...+.+|+.++++++ +|+|+++.+.++...++.+++.    .+.++.+++
T Consensus        73 ~~ig~vG~D~~g~~i~~~L~~~gVd~~~~~~~~~~T~~~~i~~~-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (332)
T PLN02548         73 SYMGCIGKDKFGEEMKKCATAAGVNVHYYEDESTPTGTCAVLVV-GGERSLVANLSAANCYKVEHLKKPENWALVEKAKF  151 (332)
T ss_pred             EEEEEEcCChhHHHHHHHHHHcCCceeeeccCCCCCceEEEEEe-cCCceeeeccchhhcCCHHHhcChhhHhHHhhCCE
Confidence            99999999999999999999999999987654458999999886 7999998887766666655443    235788999


Q ss_pred             EEEEec-c-ccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          174 LVLRFG-M-FNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       174 v~~~~~-~-~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      +|++.. . .+.+.+..+++.++++|.++.+|+++.......++.+.++++  ++|++++|++|++.|+|
T Consensus       152 v~~~g~~~~~~~~~~~~~~~~a~~~g~~~~~~~~~~~~~~~~~~~l~~~l~--~~dil~~n~~E~~~l~g  219 (332)
T PLN02548        152 YYIAGFFLTVSPESIMLVAEHAAANNKTFMMNLSAPFICEFFKDQLMEALP--YVDFLFGNETEARTFAK  219 (332)
T ss_pred             EEEEEEEccCCHHHHHHHHHHHHHcCCEEEEECCChhHHHHhHHHHHHHHh--hCCEEEecHHHHHHHhC
Confidence            999932 1 356788888999999999999999755322233455778888  89999999999998864

>PRK11142 ribokinase; Provisional

Probab=99.96  E-value=1.7e-27  Score=202.21  Aligned_cols=189  Identities=23%  Similarity=0.350  Sum_probs=156.1

Q ss_pred             CeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCC
Q 026265           16 ALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGV   95 (241)
Q Consensus        16 ~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~   95 (241)
                      .+|+++| .+++|+++.+     +++|.+ |....                    .......+||++.|+|++|+ +||.
T Consensus         3 ~~i~~iG-~~~~D~~~~~-----~~~p~~-~~~~~--------------------~~~~~~~~GG~~~Nva~~la-~lG~   54 (306)
T PRK11142          3 GKLVVLG-SINADHVLNL-----ESFPRP-GETLT--------------------GRHYQVAFGGKGANQAVAAA-RLGA   54 (306)
T ss_pred             CcEEEEC-CceeeEEEEe-----CCCCCC-CCeeE--------------------eccceecCCCcHHHHHHHHH-hcCC
Confidence            3699999 9999999998     456543 22111                    13678899999999999999 8999


Q ss_pred             ceeEEeeecCChhHHHHHHHHHhCCceeeceeecCC-CceeEEEEEcCCCCeeeeeCccccCCCCcccCCh--hhhCCcc
Q 026265           96 PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA--EDVKGSK  172 (241)
Q Consensus        96 ~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~-~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~~--~~i~~~~  172 (241)
                      ++.++|.+|+|.+|+.+++.|++.||+++++.+.++ +|+.++++++++|+|+++.++++...+++++++.  +.+++++
T Consensus        55 ~~~~~~~vG~D~~g~~i~~~L~~~gV~~~~i~~~~~~~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~l~~~~  134 (306)
T PRK11142         55 DIAFIACVGDDSIGESMRQQLAKDGIDTAPVSVIKGESTGVALIFVNDEGENSIGIHAGANAALTPALVEAHRELIANAD  134 (306)
T ss_pred             cEEEEEEECCChhHHHHHHHHHHcCCChhhEEEcCCCCCCEEEEEECCCCCEEEEEeCCccccCCHHHHHHHHhhhccCC
Confidence            999999999999999999999999999999887665 8999999998889999988888877788776652  5689999


Q ss_pred             EEEEEeccccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          173 WLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       173 ~v~~~~~~~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      ++|++.. .+.+.+..+++.+++.|.+++||++...   .+.   ..+++  ++|++++|++|++.++|
T Consensus       135 ~v~~~~~-~~~~~~~~~~~~a~~~g~~v~~d~~~~~---~~~---~~~~~--~~dil~~n~~Ea~~l~g  194 (306)
T PRK11142        135 ALLMQLE-TPLETVLAAAKIAKQHGTKVILNPAPAR---ELP---DELLA--LVDIITPNETEAEKLTG  194 (306)
T ss_pred             EEEEeCC-CCHHHHHHHHHHHHHcCCEEEEECCCCc---ccC---HHHHh--hCCEEcCCHHHHHHHhC
Confidence            9999943 2567788899999999999999997431   122   34555  99999999999998875

>cd01174 ribokinase Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP

Probab=99.96  E-value=1.9e-27  Score=200.57  Aligned_cols=188  Identities=30%  Similarity=0.430  Sum_probs=154.7

Q ss_pred             eEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCCc
Q 026265           17 LILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVP   96 (241)
Q Consensus        17 ~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~~   96 (241)
                      +|+++| .+++|++..+     +++|.+ +....                    ......++||++.|+|++|+ +||.+
T Consensus         1 ~il~iG-~~~~D~~~~~-----~~~~~~-~~~~~--------------------~~~~~~~~GG~~~NvA~~l~-~lG~~   52 (292)
T cd01174           1 KVVVVG-SINVDLVTRV-----DRLPKP-GETVL--------------------GSSFETGPGGKGANQAVAAA-RLGAR   52 (292)
T ss_pred             CEEEEe-eceeEEEEEe-----cCCCCC-CCcEE--------------------eccceecCCCcHHHHHHHHH-HcCCc
Confidence            489999 9999999998     455533 21111                    13577899999999999999 89999


Q ss_pred             eeEEeeecCChhHHHHHHHHHhCCceeeceeecCC-CceeEEEEEcCCCCeeeeeCccccCCCCcccCCh--hhhCCccE
Q 026265           97 CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA--EDVKGSKW  173 (241)
Q Consensus        97 ~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~-~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~~--~~i~~~~~  173 (241)
                      +.++|.+|+|.+|+.+++.|++.||+++++.+.++ +|+.++++++++|+|+++.+.++...+++++++.  +.++++++
T Consensus        53 ~~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (292)
T cd01174          53 VAMIGAVGDDAFGDELLENLREEGIDVSYVEVVVGAPTGTAVITVDESGENRIVVVPGANGELTPADVDAALELIAAADV  132 (292)
T ss_pred             eEEEEEEcCCccHHHHHHHHHHcCCCceEEEEcCCCCceeEEEEEcCCCceEEEEeCCCCCCCCHHHHHHHHHhcccCCE
Confidence            99999999999999999999999999999866544 8999999998889999998888776777665543  46889999


Q ss_pred             EEEEeccccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          174 LVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       174 v~~~~~~~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      +|++.. .+.+.+..+++.+++.|++++||+++..      +.+..+++  ++|++++|++|++.|+|
T Consensus       133 v~~~~~-~~~~~~~~~~~~a~~~g~~v~~D~~~~~------~~~~~~~~--~~dil~~n~~E~~~l~~  191 (292)
T cd01174         133 LLLQLE-IPLETVLAALRAARRAGVTVILNPAPAR------PLPAELLA--LVDILVPNETEAALLTG  191 (292)
T ss_pred             EEEeCC-CCHHHHHHHHHHHHhcCCEEEEeCCCcC------cCcHHHHh--hCCEEeeCHHHHHHHhC
Confidence            999854 3667888999999999999999997542      12345566  99999999999999875

This reaction is the first step in the ribose metabolism. It traps ribose within the cell after uptake and also prepares the sugar for use in the synthesis of nucleotides and histidine, and for entry into the pentose phosphate pathway. Ribokinase is dimeric in solution.

>PLN02967 kinase

Probab=99.95  E-value=3.4e-27  Score=211.97  Aligned_cols=167  Identities=16%  Similarity=0.186  Sum_probs=141.8

Q ss_pred             CCceeecCChHHHHHHHHHhhcCCceeEEeeecCChhHHHHHHHHHhCCceeeceeecCC-CceeEEEEEcCCCCeeee-
Q 026265           72 SPIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMR-  149 (241)
Q Consensus        72 ~~~~~~~GG~~~N~a~~la~~LG~~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~-~T~~~~~~~~~~g~r~~~-  149 (241)
                      ..+...+||+++|+|++|+ |||.++.|+|.||+|.+|+++++.|++.||+++++.+.++ +|+.++++++++|+|.++ 
T Consensus       236 ~~~~~~~GGa~aNVAvaLA-RLG~~v~fIg~VGdD~~G~~ll~~L~~~GVDts~v~~~~~~~Tgla~V~vd~~Gerr~~~  314 (581)
T PLN02967        236 EKFVRAPGGSAGGVAIALA-SLGGKVAFMGKLGDDDYGQAMLYYLNVNKVQTRSVCIDGKRATAVSTMKIAKRGRLKTTC  314 (581)
T ss_pred             cceeeecCcHHHHHHHHHH-HCCCCEEEEEEeCCCHHHHHHHHHHHHcCCcccceEecCCCCCcEEEEEECCCCceEEEE
Confidence            4788899999999999999 8999999999999999999999999999999999988765 899999999988998775 


Q ss_pred             eCccccCCCCcccCChhhhCCccEEEEE-eccc---cHHHHHHHHHHHHHCCCeEEEeCCchHHH----hhchhhHHhhh
Q 026265          150 PCLSNAVKIQADELIAEDVKGSKWLVLR-FGMF---NFEVIQAAIRIAKQEGLSVSMDLASFEMV----RNFRTPLLQLL  221 (241)
Q Consensus       150 ~~~g~~~~l~~~~~~~~~i~~~~~v~~~-~~~~---~~~~~~~~~~~a~~~g~~i~~D~~~~~~~----~~~~~~l~~~l  221 (241)
                      .++++...++.++++.+.+++++++|++ +.+.   ....+..+++.+++.|++|+||++.+...    ...++.+.+++
T Consensus       315 ~~~gAd~~L~~~di~~~~l~~A~i~hfgg~~ll~e~~~~all~alk~Ak~~Gv~VsFDpNlR~~lw~~~e~~~e~i~elL  394 (581)
T PLN02967        315 VKPCAEDSLSKSEINIDVLKEAKMFYFNTHSLLDPTMRSTTLRAIKISKKLGGVIFYDLNLPLPLWSSSEETKSFIQEAW  394 (581)
T ss_pred             ecCChhhhCChhhcCHhHhcCCCEEEEeCchhcccchHHHHHHHHHHHHHCCCEEEEECCCCcccccchHHHHHHHHHHH
Confidence            3578888888888887788999999999 3322   24678899999999999999999754211    11234466788


Q ss_pred             cCCCccEEecCHHHHHhhhC
Q 026265          222 ESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       222 ~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      +  ++||+++|++|++.|+|
T Consensus       395 ~--~aDILk~NeeEl~~LtG  412 (581)
T PLN02967        395 N--LADIIEVTKQELEFLCG  412 (581)
T ss_pred             H--hCCEEEECHHHHHHHhC
Confidence            8  99999999999999875

>PTZ00292 ribokinase; Provisional

Probab=99.95  E-value=5.1e-27  Score=201.21  Aligned_cols=196  Identities=21%  Similarity=0.270  Sum_probs=158.7

Q ss_pred             CCCeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhc
Q 026265           14 QAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGF   93 (241)
Q Consensus        14 ~~~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~L   93 (241)
                      ..++|+++| .+++|+++.+     +++|.+ |....                    .......+||++.|+|++|+ +|
T Consensus        14 ~~~~vlviG-~~~vD~~~~~-----~~~~~~-~~~~~--------------------~~~~~~~~GG~~~NvA~~la-~l   65 (326)
T PTZ00292         14 AEPDVVVVG-SSNTDLIGYV-----DRMPQV-GETLH--------------------GTSFHKGFGGKGANQAVMAS-KL   65 (326)
T ss_pred             CCCCEEEEc-cceeeEEEec-----CCCCCC-CCcee--------------------ecCceeCCCCcHHHHHHHHH-Hc
Confidence            356799999 9999999998     456543 22111                    13568899999999999999 89


Q ss_pred             CCceeEEeeecCChhHHHHHHHHHhCCceeeceeecCC-CceeEEEEEc-CCCCeeeeeCccccCCCCcccCCh--hhhC
Q 026265           94 GVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVD-ASGNRTMRPCLSNAVKIQADELIA--EDVK  169 (241)
Q Consensus        94 G~~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~-~T~~~~~~~~-~~g~r~~~~~~g~~~~l~~~~~~~--~~i~  169 (241)
                      |.++.++|.+|+|.+|+.+++.|++.||+++++.+.++ +|++++++++ ++|+|+++.++++...+++++++.  +.+.
T Consensus        66 G~~~~~is~vG~D~~g~~i~~~l~~~GI~~~~~~~~~~~~t~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~i~  145 (326)
T PTZ00292         66 GAKVAMVGMVGTDGFGSDTIKNFKRNGVNTSFVSRTENSSTGLAMIFVDTKTGNNEIVIIPGANNALTPQMVDAQTDNIQ  145 (326)
T ss_pred             CCCeEEEEEECCChhHHHHHHHHHHcCCChhhEEEcCCCCCcEEEEEEeCCCCceEEEEeCCccccCCHHHHHHHHHHhh
Confidence            99999999999999999999999999999999976654 8999999998 789999988888877788776653  3467


Q ss_pred             C-ccEEEEEeccccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          170 G-SKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       170 ~-~~~v~~~~~~~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      + +++++++.. .+.+.+.++++.+++.|+++++|+++.... ...+.+.++++  ++|++++|++|++.|+|
T Consensus       146 ~~~~~~~~~~~-~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~-~~~~~~~~~l~--~~dii~~n~~E~~~l~g  214 (326)
T PTZ00292        146 NICKYLICQNE-IPLETTLDALKEAKERGCYTVFNPAPAPKL-AEVEIIKPFLK--YVSLFCVNEVEAALITG  214 (326)
T ss_pred             hhCCEEEECCC-CCHHHHHHHHHHHHHcCCEEEEECCCCccc-cccccHHHHHh--cCCEEcCCHHHHHHHhC
Confidence            7 999998743 356778889999999999999999854210 01145667777  99999999999998865

>PLN02323 probable fructokinase

Probab=99.95  E-value=9e-27  Score=200.01  Aligned_cols=198  Identities=22%  Similarity=0.334  Sum_probs=157.9

Q ss_pred             cccCCCCeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHH
Q 026265           10 REASQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGL   89 (241)
Q Consensus        10 ~~~~~~~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~l   89 (241)
                      |.-.++.+|+++| +.++|++..++     .+|..                         ........+||+++|+|+++
T Consensus         5 ~~~~~~~~i~~iG-~~~vD~~~~~~-----~~~~~-------------------------~~~~~~~~~GG~~~NvA~~l   53 (330)
T PLN02323          5 PSTAESSLVVCFG-EMLIDFVPTVS-----GVSLA-------------------------EAPAFKKAPGGAPANVAVGI   53 (330)
T ss_pred             CccCCCCcEEEec-hhhhhhccCCC-----CCCcc-------------------------cccceeecCCChHHHHHHHH
Confidence            3434567799999 99999998773     33321                         01256789999999999999


Q ss_pred             HhhcCCceeEEeeecCChhHHHHHHHHHhCCceeeceeecCC-CceeEEEEEcCCCCeeeeeCc--cccCCCCcccCChh
Q 026265           90 SVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCL--SNAVKIQADELIAE  166 (241)
Q Consensus        90 a~~LG~~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~-~T~~~~~~~~~~g~r~~~~~~--g~~~~l~~~~~~~~  166 (241)
                      + |||.++.++|.+|+|.+|+++++.|++.||+++++.+.++ +|+.++++++++|+|+++++.  ++...+++++++.+
T Consensus        54 a-~LG~~~~~i~~vG~D~~g~~i~~~L~~~GI~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~  132 (330)
T PLN02323         54 S-RLGGSSAFIGKVGDDEFGHMLADILKKNGVNNEGVRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLRESELDLD  132 (330)
T ss_pred             H-hcCCceeEEEEecCChhHHHHHHHHHHcCCCCcceEEcCCCCceEEEEEECCCCceeEEeecCCchhccCChHHCChH
Confidence            9 8999999999999999999999999999999999887765 899999999888999988764  55556788888777


Q ss_pred             hhCCccEEEEEe-ccc-c--HHHHHHHHHHHHHCCCeEEEeCCchHHH----hhchhhHHhhhcCCCccEEecCHHHHHh
Q 026265          167 DVKGSKWLVLRF-GMF-N--FEVIQAAIRIAKQEGLSVSMDLASFEMV----RNFRTPLLQLLESGDVDLCFANEDEAAE  238 (241)
Q Consensus       167 ~i~~~~~v~~~~-~~~-~--~~~~~~~~~~a~~~g~~i~~D~~~~~~~----~~~~~~l~~~l~~~~~d~l~~N~~Ea~~  238 (241)
                      .+++++++|++. .+. .  ...+..+++.+++.|.+++||++.....    ...++.+.++++  ++|++++|++|++.
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~--~~dil~~n~~E~~~  210 (330)
T PLN02323        133 LIRKAKIFHYGSISLITEPCRSAHLAAMKIAKEAGALLSYDPNLRLPLWPSAEAAREGIMSIWD--EADIIKVSDEEVEF  210 (330)
T ss_pred             HHccCCEEEEechhccCchHHHHHHHHHHHHHHcCCEEEEcCCCChhhccCHHHHHHHHHHHHH--hCCEEEcCHHHHHH
Confidence            789999999883 211 1  2456788899999999999999743210    123445666777  99999999999998


Q ss_pred             hhC
Q 026265          239 LVR  241 (241)
Q Consensus       239 l~g  241 (241)
                      ++|
T Consensus       211 l~g  213 (330)
T PLN02323        211 LTG  213 (330)
T ss_pred             HhC
Confidence            875

>PLN02543 pfkB-type carbohydrate kinase family protein

Probab=99.95  E-value=4.8e-27  Score=208.92  Aligned_cols=206  Identities=17%  Similarity=0.181  Sum_probs=156.1

Q ss_pred             CCeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcC
Q 026265           15 AALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFG   94 (241)
Q Consensus        15 ~~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG   94 (241)
                      +++|+|+| .+++|++...... +..+              ...++++++.-.+ ++..+...+||+++|+|++++ |||
T Consensus       125 ~~~v~~~G-e~liDf~~~~~~~-~~~~--------------~~~~~~~~~~~~~-~~~~f~~~~GGa~aNVAvaLA-RLG  186 (496)
T PLN02543        125 PPLVCCFG-AVQKEFVPTVRVH-DNQM--------------HPDMYSQWKMLQW-DPPEFARAPGGPPSNVAISHV-RLG  186 (496)
T ss_pred             CCeEEEeC-hhhhhhcCCCccc-cccc--------------ccccccccccccc-cCCeeEeccCcHHHHHHHHHH-HCC
Confidence            46799999 9999999875210 0100              0012222221111 234688999999999999999 999


Q ss_pred             CceeEEeeecCChhHHHHHHHHHhCCceeeceeecCC-CceeEEEEEc--CCCCeeee--eCccccCCCCcccCChhhhC
Q 026265           95 VPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVD--ASGNRTMR--PCLSNAVKIQADELIAEDVK  169 (241)
Q Consensus        95 ~~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~-~T~~~~~~~~--~~g~r~~~--~~~g~~~~l~~~~~~~~~i~  169 (241)
                      .++.|+|.||+|.+|+++++.|+++||+++++.+.++ +|+.+++.++  ++| |.++  ...++...+++++++.+.++
T Consensus       187 ~~vafIG~VGdD~fG~~l~~~L~~~GVDts~v~~~~~~~Tgla~V~v~~~~~g-r~~~~~~~~gA~~~L~~~di~~~~l~  265 (496)
T PLN02543        187 GRAAFMGKVGDDDFGEELVLMMNKERVQTRAVKFDENAKTACSRMKIKFRDGG-KMVAETVKEAAEDSLLASELNLAVLK  265 (496)
T ss_pred             CCEEEEEEeCCCHHHHHHHHHHHHcCCcccceEecCCCCCceEEEEEEeCCCC-CEEEEecCCCHHHhCChhhcCHhHhC
Confidence            9999999999999999999999999999999998866 8999999884  345 5554  23466667888888877899


Q ss_pred             CccEEEEE-eccc-c--HHHHHHHHHHHHHCCCeEEEeCCchHHH----hhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          170 GSKWLVLR-FGMF-N--FEVIQAAIRIAKQEGLSVSMDLASFEMV----RNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       170 ~~~~v~~~-~~~~-~--~~~~~~~~~~a~~~g~~i~~D~~~~~~~----~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      +++++|++ +.+. +  .+.+..+++.+++.|++|+||++.+...    +..++.+.++++  ++|++++|++|++.|+|
T Consensus       266 ~a~ilh~~~~~l~~~~~~~a~~~al~~Ak~~G~~VsfDpN~R~~LW~~~~~~~~~i~~~l~--~aDIl~~SeeEa~~Ltg  343 (496)
T PLN02543        266 EARMFHFNSEVLTSPSMQSTLFRAIELSKKFGGLIFFDLNLPLPLWRSRDETRELIKKAWN--EADIIEVSRQELEFLLD  343 (496)
T ss_pred             CCceEEECChhhcCchHHHHHHHHHHHHHHCCCEEEEeCCCCccccCCHHHHHHHHHHHHH--hCCEEEecHHHHHHHhC
Confidence            99999999 3322 2  3678889999999999999999854211    122334566777  99999999999999875

>cd01944 YegV_kinase_like YegV-like sugar kinase

Probab=99.95  E-value=3.5e-26  Score=192.75  Aligned_cols=191  Identities=20%  Similarity=0.273  Sum_probs=150.5

Q ss_pred             eEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCCc
Q 026265           17 LILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVP   96 (241)
Q Consensus        17 ~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~~   96 (241)
                      +|+++| .+++|++..+     +++|.+.. ..                    ........+|| +.|+|++++ +||.+
T Consensus         1 ~i~~iG-~~~~D~i~~~-----~~~~~~~~-~~--------------------~~~~~~~~~GG-~~Nva~~l~-~lG~~   51 (289)
T cd01944           1 KVLVIG-AAVVDIVLDV-----DKLPASGG-DI--------------------EAKSKSYVIGG-GFNVMVAAS-RLGIP   51 (289)
T ss_pred             CeEEEc-ceeEEEEeec-----ccCCCCCC-cc--------------------ccceeeeccCc-HHHHHHHHH-HcCCC
Confidence            489999 9999999998     45653322 11                    11357899999 999999999 89999


Q ss_pred             eeEEeeecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEEEcCCCCeeeeeCccccCCCCcccCChhhhCCccEEEE
Q 026265           97 CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLVL  176 (241)
Q Consensus        97 ~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~~~~i~~~~~v~~  176 (241)
                      +.++|.+|+|.+|+++++.|++.||+++++.+.+.+|+.++++++++|+|+++.+.++...+++++++...+.+++++|+
T Consensus        52 ~~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (289)
T cd01944          52 TVNAGPLGNGNWADQIRQAMRDEGIEILLPPRGGDDGGCLVALVEPDGERSFISISGAEQDWSTEWFATLTVAPYDYVYL  131 (289)
T ss_pred             eEEEEEecCChHHHHHHHHHHHcCCccccccccCCCCeEEEEEEcCCCceEEEEeCCccCCCCHHHhccccCCCCCEEEE
Confidence            99999999999999999999999999998887655788888898888999998888877777776666545788999999


Q ss_pred             E-eccc----cHHHHHHHHHHHHHCCCeEEEeCCchHHHhhc-hhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          177 R-FGMF----NFEVIQAAIRIAKQEGLSVSMDLASFEMVRNF-RTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       177 ~-~~~~----~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~-~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      + +.+.    ..+.+.++++.++ .+.++++|+++..  ..+ .+.+.++++  ++|++++|++|++.|+|
T Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~D~~~~~--~~~~~~~~~~~l~--~~d~~~~n~~E~~~l~g  197 (289)
T cd01944         132 SGYTLASENASKVILLEWLEALP-AGTTLVFDPGPRI--SDIPDTILQALMA--KRPIWSCNREEAAIFAE  197 (289)
T ss_pred             eCccccCcchhHHHHHHHHHhcc-CCCEEEEcCcccc--cccCHHHHHHHHh--cCCEEccCHHHHHHHhC
Confidence            9 3321    1345555655543 5789999998552  111 344667777  99999999999999875

Found only in bacteria, YegV-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time.

>COG0524 RbsK Sugar kinases, ribokinase family [Carbohydrate transport and metabolism]

Probab=99.94  E-value=5.3e-26  Score=193.61  Aligned_cols=195  Identities=30%  Similarity=0.463  Sum_probs=162.1

Q ss_pred             eEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCCc
Q 026265           17 LILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVP   96 (241)
Q Consensus        17 ~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~~   96 (241)
                      +|+++| ++++|++....    +++|.+ +....                    .......+||+++|+|++++ |||.+
T Consensus         1 ~v~~iG-~~~vD~~~~~~----~~~~~~-~~~~~--------------------~~~~~~~~GG~~~N~A~~~a-~lG~~   53 (311)
T COG0524           1 DVVVIG-EANVDLIAQVV----DRLPEP-GETVL--------------------GDFFKVAGGGKGANVAVALA-RLGAK   53 (311)
T ss_pred             CEEEEC-chhhheehhhc----cCCCCC-ccccc--------------------ccceeecCCchHHHHHHHHH-HcCCc
Confidence            489999 99999999852    455432 21111                    12467889999999999999 99999


Q ss_pred             eeEEeeecCChhHHHHHHHHHhCCceeeceeecCC-CceeEEEEEcCCCCeeeeeCcc-ccCCCCcccCChhhhCCccEE
Q 026265           97 CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLS-NAVKIQADELIAEDVKGSKWL  174 (241)
Q Consensus        97 ~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~-~T~~~~~~~~~~g~r~~~~~~g-~~~~l~~~~~~~~~i~~~~~v  174 (241)
                      +.++|.+|+|.+|+.+++.|++.||+++++...++ +|+.++++++++|+|+|.++++ +...+++++++.+.+..++++
T Consensus        54 ~~~~~~vG~D~~g~~~~~~l~~~GVd~~~~~~~~~~~tg~~~i~~~~~g~r~~~~~~~~a~~~~~~~~~~~~~~~~~~~~  133 (311)
T COG0524          54 VALIGAVGDDDFGEFLLEELRKEGVDTSHVVTDEGATTGLALILVDEDGERTFVFYRGAAALLLTPEDLDEDELAGADVL  133 (311)
T ss_pred             eEEEEEecCcHHHHHHHHHHHHcCCccceEEEcCCCcceEEEEEEcCCCceeEEEECCcccccCChHHcChHHHhhcCee
Confidence            99999999999999999999999999999998877 8999999999889999999888 466688888876788899999


Q ss_pred             EEE-ecc-ccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          175 VLR-FGM-FNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       175 ~~~-~~~-~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      |++ +.+ .+++.+..+++.+++.|.++++|+++...... ++.++++++  ++|++++|++|++.|+|
T Consensus       134 ~~~~~~l~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~-~~~~~~~l~--~~d~~~~n~~E~~~l~g  199 (311)
T COG0524         134 HISGIQLEIPPEALLAALELAKAAGVTVSFDLNPRPALWD-RELLEELLA--LADILFPNEEEAELLTG  199 (311)
T ss_pred             eEEEeecCCChHHHHHHHHHHHHcCCeEEEecCCCccccc-hhhHHHHHh--hCCEEeCCHHHHHHHhC
Confidence            999 443 24488999999999999999999987742111 356777888  99999999999999875

>cd01942 ribokinase_group_A Ribokinase-like subgroup A

Probab=99.94  E-value=7.3e-26  Score=189.71  Aligned_cols=185  Identities=24%  Similarity=0.298  Sum_probs=149.8

Q ss_pred             eEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCCc
Q 026265           17 LILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVP   96 (241)
Q Consensus        17 ~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~~   96 (241)
                      +|+++| ++++|+++.+     +++|.+....                     ...+....+||++.|+|++++ |||.+
T Consensus         1 ~v~~iG-~~~~D~~~~v-----~~~p~~~~~~---------------------~~~~~~~~~GG~~~Nva~~l~-~lg~~   52 (279)
T cd01942           1 DVAVVG-HLNYDIILKV-----ESFPGPFESV---------------------LVKDLRREFGGSAGNTAVALA-KLGLS   52 (279)
T ss_pred             CEEEEe-cceeeeEeec-----ccCCCCCceE---------------------ecceeeecCCcHHHHHHHHHH-HcCCC
Confidence            689999 9999999998     5666431111                     124788999999999999999 89999


Q ss_pred             eeEEeeecCChhHHHHHHHHHhCCceeeceeecC-CCceeEEEEEcCCCCeeeeeCccccCCCCcccCChhhhCCccEEE
Q 026265           97 CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKR-GPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLV  175 (241)
Q Consensus        97 ~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~-~~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~~~~i~~~~~v~  175 (241)
                      +.++|.+|+|.+|+++++.|++.||++.++...+ .+|+.++++++++|+|++..++++...+++++ ....+++++++|
T Consensus        53 ~~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  131 (279)
T cd01942          53 PGLVAAVGEDFHGRLYLEELREEGVDTSHVRVVDEDSTGVAFILTDGDDNQIAYFYPGAMDELEPND-EADPDGLADIVH  131 (279)
T ss_pred             ceEEEEecCCcchHHHHHHHHHcCCCccceEEcCCCCcceEEEEEcCCCCEEEEecCCcccccccCC-chhhhcccCEEE
Confidence            9999999999999999999999999999996554 48999999998888898887788777777665 456789999999


Q ss_pred             EEeccccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHH
Q 026265          176 LRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAA  237 (241)
Q Consensus       176 ~~~~~~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~  237 (241)
                      ++..  +  .+.++++.+++.|+++++|+++.... ...+.+.++++  ++|++++|++|+.
T Consensus       132 ~~~~--~--~~~~~~~~~~~~g~~v~~D~~~~~~~-~~~~~~~~~l~--~~dil~~n~~E~~  186 (279)
T cd01942         132 LSSG--P--GLIELARELAAGGITVSFDPGQELPR-LSGEELEEILE--RADILFVNDYEAE  186 (279)
T ss_pred             eCCc--h--HHHHHHHHHHHcCCeEEEcchhhhhh-ccHHHHHHHHh--hCCEEecCHHHHH
Confidence            9942  1  46677788888899999999864311 12244667777  9999999999994

Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time.

>PRK09850 pseudouridine kinase; Provisional

Probab=99.94  E-value=9.3e-26  Score=192.38  Aligned_cols=190  Identities=23%  Similarity=0.210  Sum_probs=148.2

Q ss_pred             CCCeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhc
Q 026265           14 QAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGF   93 (241)
Q Consensus        14 ~~~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~L   93 (241)
                      +.+.|+++| .+++|+++.+.      .|++.++..                     +......+||+++|+|++++ ||
T Consensus         3 ~~~~i~~iG-~~~vD~~~~~~------~~~~~~~~~---------------------~~~~~~~~GG~~~NvA~~l~-~l   53 (313)
T PRK09850          3 EKDYVVIIG-SANIDVAGYSH------ESLNYADSN---------------------PGKIKFTPGGVGRNIAQNLA-LL   53 (313)
T ss_pred             CCCcEEEEC-cEEEeeeccCC------CcCcCCCCC---------------------ceEEEEeCCcHHHHHHHHHH-Hc
Confidence            456799999 99999999862      243333221                     12567889999999999999 89


Q ss_pred             CCceeEEeeecCChhHHHHHHHHHhCCceeeceeecCC-CceeEEEEEcCCCCeeeeeC-ccccCCCCcccCC--hhhhC
Q 026265           94 GVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPC-LSNAVKIQADELI--AEDVK  169 (241)
Q Consensus        94 G~~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~-~T~~~~~~~~~~g~r~~~~~-~g~~~~l~~~~~~--~~~i~  169 (241)
                      |.++.++|.||+|.+|+++++.|++.||+++++.+.++ +|++++++++++|+|++.++ .++...++.+.+.  .+.++
T Consensus        54 G~~~~~ig~vG~D~~g~~i~~~l~~~gVd~~~~~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  133 (313)
T PRK09850         54 GNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENTSSYLSLLDNTGEMLVAINDMNISNAITAEYLAQHREFIQ  133 (313)
T ss_pred             CCCeEEEEEecCchhHHHHHHHHHHcCCCchheeecCCCCceEEEEEecCCCCEEEEecCchHhhhCCHHHHHHHHHHHh
Confidence            99999999999999999999999999999998876666 79999999998899988665 3444556555443  24578


Q ss_pred             CccEEEEEeccccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          170 GSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       170 ~~~~v~~~~~~~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      +++++|+++. .+.+.+..+++.+  .|+++++|+++...    ...+.++++  ++|++++|++|++.|+|
T Consensus       134 ~~~~v~~~~~-~~~~~~~~~~~~~--~g~~v~~D~~~~~~----~~~~~~~l~--~~dil~~N~~Ea~~l~g  196 (313)
T PRK09850        134 RAKVIVADCN-ISEEALAWILDNA--ANVPVFVDPVSAWK----CVKVRDRLN--QIHTLKPNRLEAETLSG  196 (313)
T ss_pred             cCCEEEEeCC-CCHHHHHHHHHhc--cCCCEEEEcCCHHH----HHHHHhhhc--cceEEccCHHHHHHHhC
Confidence            9999999854 3556666666543  58999999986421    123556676  89999999999998875

>PLN02341 pfkB-type carbohydrate kinase family protein

Probab=99.94  E-value=3.3e-25  Score=198.08  Aligned_cols=207  Identities=22%  Similarity=0.245  Sum_probs=150.4

Q ss_pred             CCeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcC
Q 026265           15 AALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFG   94 (241)
Q Consensus        15 ~~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG   94 (241)
                      ..+|+++| ++++|+++.+     +++|.+ |.      +....+...+...+   +......+|| ++|+|++++ +||
T Consensus        72 ~~~vl~lG-~~~vD~i~~V-----~~lP~~-~~------~~~~~~~~~~~~~~---~~~~~~~~GG-~~NvAvaLa-rLG  133 (470)
T PLN02341         72 EIDVATLG-NLCVDIVLPV-----PELPPP-SR------EERKAYMEELAASP---PDKKSWEAGG-NCNFAIAAA-RLG  133 (470)
T ss_pred             cccEEEEC-CcceeEEEec-----CCCCCC-CH------HHHHHHHHhhcccc---cccceecCCh-HHHHHHHHH-HcC
Confidence            46899999 9999999999     567643 21      11112222111110   1234556677 799999999 899


Q ss_pred             CceeEEeeecCChhHHHHHHHHHhCCceeeceeecC---------CCceeEEEEEcCCCCeeeeeCccccCCCCcc---c
Q 026265           95 VPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKR---------GPTGQCVCLVDASGNRTMRPCLSNAVKIQAD---E  162 (241)
Q Consensus        95 ~~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~---------~~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~---~  162 (241)
                      .++.++|.||+|.+|+++++.|++.||++.++...+         .+|+.|+++++++|+|+++...+.......+   .
T Consensus       134 ~~v~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~~~~~~~~~~T~~~~vlvd~~ger~~~~~~~~~~~~~~~~~~~  213 (470)
T PLN02341        134 LRCSTIGHVGDEIYGKFLLDVLAEEGISVVGLIEGTDAGDSSSASYETLLCWVLVDPLQRHGFCSRADFGPEPAFSWISK  213 (470)
T ss_pred             CCeEEEEEecCcHHHHHHHHHHHHcCCeeeEEEecCccccccccCCCceeEEEEEcCCCCceeeeccccccccchhhhhc
Confidence            999999999999999999999999999999887654         2699999999988988765433322211111   1


Q ss_pred             C---ChhhhCCccEEEEE-ecc--ccHHHHHHHHHHHHHCCCeEEEeCCchHH-----HhhchhhHHhhhcCCCccEEec
Q 026265          163 L---IAEDVKGSKWLVLR-FGM--FNFEVIQAAIRIAKQEGLSVSMDLASFEM-----VRNFRTPLLQLLESGDVDLCFA  231 (241)
Q Consensus       163 ~---~~~~i~~~~~v~~~-~~~--~~~~~~~~~~~~a~~~g~~i~~D~~~~~~-----~~~~~~~l~~~l~~~~~d~l~~  231 (241)
                      +   ..+.++++|++|++ +..  .+.+.+..+++.+++.|++++||+++...     .+..++.+.++++  ++|++++
T Consensus       214 l~~~~~~~l~~adiv~lsg~~~~~~~~~~~~~~~~~Ak~~g~~V~~Dp~~~~~~~~~~~~~~~~~l~~~L~--~~Dil~~  291 (470)
T PLN02341        214 LSAEAKMAIRQSKALFCNGYVFDELSPSAIASAVDYAIDVGTAVFFDPGPRGKSLLVGTPDERRALEHLLR--MSDVLLL  291 (470)
T ss_pred             ccHHHHhhhhcCCEEEEeceeCCcCCHHHHHHHHHHHHHcCCEEEEeCCCcccccccChHHHHHHHHHHHh--hCCEEEe
Confidence            1   12468899999999 432  35788899999999999999999975410     0012344677887  9999999


Q ss_pred             CHHHHHhhhC
Q 026265          232 NEDEAAELVR  241 (241)
Q Consensus       232 N~~Ea~~l~g  241 (241)
                      |++|++.|+|
T Consensus       292 Ne~Ea~~l~g  301 (470)
T PLN02341        292 TSEEAEALTG  301 (470)
T ss_pred             cHHHHHHHhC
Confidence            9999999875

>cd01166 KdgK 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP)

Probab=99.94  E-value=1.3e-25  Score=189.41  Aligned_cols=190  Identities=26%  Similarity=0.392  Sum_probs=151.2

Q ss_pred             eEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCCc
Q 026265           17 LILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVP   96 (241)
Q Consensus        17 ~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~~   96 (241)
                      +|+++| +.++|++...+..    .                           +.+.+....+||++.|+|++++ +||.+
T Consensus         1 ~i~~iG-~~~iD~~~~~~~~----~---------------------------~~~~~~~~~~GG~~~N~a~~la-~lg~~   47 (294)
T cd01166           1 DVVTIG-EVMVDLSPPGGGR----L---------------------------EQADSFRKFFGGAEANVAVGLA-RLGHR   47 (294)
T ss_pred             CeEEec-hhheeeecCCCCc----c---------------------------chhhccccccCChHHHHHHHHH-hcCCc
Confidence            589999 9999999776310    0                           0113677889999999999999 89999


Q ss_pred             eeEEeeecCChhHHHHHHHHHhCCceeeceeecCC-CceeEEEEEcCCCCeeeeeCcc--ccCCCCcccCChhhhCCccE
Q 026265           97 CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLS--NAVKIQADELIAEDVKGSKW  173 (241)
Q Consensus        97 ~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~-~T~~~~~~~~~~g~r~~~~~~g--~~~~l~~~~~~~~~i~~~~~  173 (241)
                      +.++|.+|+|.+|+++++.|++.||++.++.+.++ +|+.+++.++++|+|+++.+.+  +...++.++++...++++++
T Consensus        48 ~~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (294)
T cd01166          48 VALVTAVGDDPFGRFILAELRREGVDTSHVRVDPGRPTGLYFLEIGAGGERRVLYYRAGSAASRLTPEDLDEAALAGADH  127 (294)
T ss_pred             eEEEEecCCCHHHHHHHHHHHHcCCCCceEEEeCCCcceEEEEEecCCCCceEEEeCCCChhHhCChhhCCHHHHhCCCE
Confidence            99999999999999999999999999999876655 8999999998778998877643  44567777776667899999


Q ss_pred             EEEEecc---cc--HHHHHHHHHHHHHCCCeEEEeCCchHH---HhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          174 LVLRFGM---FN--FEVIQAAIRIAKQEGLSVSMDLASFEM---VRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       174 v~~~~~~---~~--~~~~~~~~~~a~~~g~~i~~D~~~~~~---~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      +|++...   .+  .+.+.++++.+++.+.++++|++....   .....+.+.++++  ++|++++|+.|++.|+|
T Consensus       128 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~D~~~~~~~~~~~~~~~~~~~~~~--~~dil~~n~~E~~~l~~  201 (294)
T cd01166         128 LHLSGITLALSESAREALLEALEAAKARGVTVSFDLNYRPKLWSAEEAREALEELLP--YVDIVLPSEEEAEALLG  201 (294)
T ss_pred             EEEcCcchhhCHHHHHHHHHHHHHHHHcCCEEEECCCCcchhcChHHHHHHHHHHHH--hCCEEEcCHHHHHHHhC
Confidence            9999322   12  267888899999999999999975321   0112344566777  99999999999998865

KDG is the common intermediate product, that allows organisms to channel D-glucuronate and/or D-galacturinate into the glycolysis and therefore use polymers, like pectin and xylan as carbon sources.

>cd01939 Ketohexokinase Ketohexokinase (fructokinase, KHK) catalyzes the phosphorylation of fructose to fructose-1-phosphate (F1P), the first step in the metabolism of dietary fructose

Probab=99.94  E-value=4.5e-25  Score=186.14  Aligned_cols=185  Identities=19%  Similarity=0.282  Sum_probs=147.3

Q ss_pred             eEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCCc
Q 026265           17 LILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVP   96 (241)
Q Consensus        17 ~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~~   96 (241)
                      .|+++| .+++|+++.+     +++|.+.. ...                    .......+||+++|+|++++ +||.+
T Consensus         1 ~v~~iG-~~~vD~~~~v-----~~~p~~~~-~~~--------------------~~~~~~~~GG~a~NvA~~la-~lG~~   52 (290)
T cd01939           1 AVLCVG-LTVLDFITTV-----DKYPFEDS-DQR--------------------TTNGRWQRGGNASNSCTVLR-LLGLS   52 (290)
T ss_pred             CEEEEe-eeeeEEEeee-----cCCCCCCc-ceE--------------------eeeeeEecCCCHHHHHHHHH-HcCCc
Confidence            489999 9999999999     56664322 111                    12457889999999999999 89999


Q ss_pred             eeEEeeecCChhHHHHHHHHHhCCceeeceeecCC-CceeEEEEEcCCCCeeeeeCccccCCCCcccCChhhhCCccEEE
Q 026265           97 CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLV  175 (241)
Q Consensus        97 ~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~-~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~~~~i~~~~~v~  175 (241)
                      +.++|.+|+|++|+++++.|++.||++.++.+.++ .++.++++++++|+|+++.+.++...++.++++...+++++++|
T Consensus        53 ~~~~~~vG~D~~g~~~~~~l~~~gId~~~~~~~~~~~~~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (290)
T cd01939          53 CEFLGVLSRGPVFESLLDDFQSRGIDISHCYRKDIDEPASSYIIRSRAGGRTTIVNDNNLPEVTYDDFSKIDLTQYGWIH  132 (290)
T ss_pred             eEEEEeecCCHHHHHHHHHHHHcCCceeeeeEcCCCCCeeEEEEEcCCCCeEEEEeCCCCCCCCHHHHhhhhhccCCEEE
Confidence            99999999999999999999999999999866554 56667888877889988887777777887777655568999999


Q ss_pred             EEeccccHHHHHHHHHHHHHCC-------CeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhh
Q 026265          176 LRFGMFNFEVIQAAIRIAKQEG-------LSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAEL  239 (241)
Q Consensus       176 ~~~~~~~~~~~~~~~~~a~~~g-------~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l  239 (241)
                      ++..  .+....++++.+++.+       +++++|+...      .+.++++++  ++|++++|++|++.+
T Consensus       133 ~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~------~~~~~~~l~--~~di~~~n~~~~~~~  193 (290)
T cd01939         133 FEGR--NPDETLRMMQHIEEHNNRRPEIRITISVEVEKP------REELLELAA--YCDVVFVSKDWAQSR  193 (290)
T ss_pred             Eecc--CHHHHHHHHHHHHHhcCcCCCcceEEEEEeccC------chhhhhHHh--hCCEEEEEhHHHHhc
Confidence            9953  2345667777777766       6888998632      344667887  999999999987754

KHK can also phosphorylate several other furanose sugars. It is found in higher eukaryotes where it is believed to function as a dimer and requires K(+) and ATP to be active. In humans, hepatic KHK deficiency causes fructosuria, a benign inborn error of metabolism.

>cd01945 ribokinase_group_B Ribokinase-like subgroup B

Probab=99.93  E-value=1.3e-24  Score=182.69  Aligned_cols=187  Identities=23%  Similarity=0.324  Sum_probs=150.2

Q ss_pred             eEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCCc
Q 026265           17 LILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVP   96 (241)
Q Consensus        17 ~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~~   96 (241)
                      +|+++| .+++|++..+     +++|.+.... .                    .......+||++.|+|.+|+ +||.+
T Consensus         1 ~i~~iG-~~~iD~~~~~-----~~~p~~~~~~-~--------------------~~~~~~~~GG~~~NvA~~l~-~lG~~   52 (284)
T cd01945           1 RVLGVG-LAVLDLIYLV-----ASFPGGDGKI-V--------------------ATDYAVIGGGNAANAAVAVA-RLGGQ   52 (284)
T ss_pred             CEEEEC-cceeEEEEEe-----ccCCCCCCeE-E--------------------EeEEEEecCCHHHHHHHHHH-HcCCC
Confidence            589999 9999999998     4565432111 0                    13678999999999999999 89999


Q ss_pred             eeEEeeecCChhHHHHHHHHHhCCceeeceeecCC-CceeEEEEEcCCCCeeeeeCccccCCCCcccCChhhhCCccEEE
Q 026265           97 CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLV  175 (241)
Q Consensus        97 ~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~-~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~~~~i~~~~~v~  175 (241)
                      +.++|.+|+|.+|+.+++.|++.||++.++.+.++ +|+.+++ ...+|+|++..+.+....++.++++...+++++++|
T Consensus        53 ~~~~~~vG~D~~g~~i~~~l~~~gI~~~~~~~~~~~~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  131 (284)
T cd01945          53 ARLIGVVGDDAIGRLILAELAAEGVDTSFIVVAPGARSPISSI-TDITGDRATISITAIDTQAAPDSLPDAILGGADAVL  131 (284)
T ss_pred             eEEEEEecCchHHHHHHHHHHHcCCCccceeecCCCCCccEEE-EccCCCceEEEecCCCCCCCcccCCHHHhCcCCEEE
Confidence            99999999999999999999999999999988765 7888776 444677877767666667777778777789999999


Q ss_pred             EEeccccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          176 LRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       176 ~~~~~~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      ++..  .++...++++.+++.|.++++|+.+..    ..+ +.++++  ++|++++|++|++.++|
T Consensus       132 i~~~--~~~~~~~~~~~~~~~g~~v~~~~~~~~----~~~-~~~~~~--~~dil~~n~~e~~~l~~  188 (284)
T cd01945         132 VDGR--QPEAALHLAQEARARGIPIPLDLDGGG----LRV-LEELLP--LADHAICSENFLRPNTG  188 (284)
T ss_pred             EcCC--CHHHHHHHHHHHHHcCCCeeEeccCCc----ccc-hHHHhc--cCCEEEeChhHHhhhcC
Confidence            9942  346778899999999997777765432    222 566777  99999999999998764

Found in bacteria and plants, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. .

>TIGR02152 D_ribokin_bact ribokinase

Probab=99.93  E-value=3.3e-24  Score=181.03  Aligned_cols=183  Identities=24%  Similarity=0.385  Sum_probs=149.8

Q ss_pred             CeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCCceeEEeee
Q 026265           24 AALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVPCGLIGAY  103 (241)
Q Consensus        24 ~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~~~~~vg~v  103 (241)
                      ++++|++..+     +++|.+ |....                    .......+||++.|+|++++ +||.++.+++.+
T Consensus         2 ~~~~D~~~~~-----~~~p~~-~~~~~--------------------~~~~~~~~GG~~~Nva~~l~-~lg~~~~~~~~v   54 (293)
T TIGR02152         2 SINMDLVLRT-----DRLPKP-GETVH--------------------GHSFQIGPGGKGANQAVAAA-RLGAEVSMIGKV   54 (293)
T ss_pred             CceEeEEEEe-----CCCCCC-CCcEe--------------------cCCceecCCCcHHHHHHHHH-HCCCCEEEEEEe
Confidence            8999999999     456543 22211                    23678999999999999999 899999999999


Q ss_pred             cCChhHHHHHHHHHhCCceeeceeecCC-CceeEEEEEcCCCCeeeeeCccccCCCCcccCC--hhhhCCccEEEEEecc
Q 026265          104 GDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNAVKIQADELI--AEDVKGSKWLVLRFGM  180 (241)
Q Consensus       104 G~D~~g~~i~~~l~~~gvd~~~~~~~~~-~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~--~~~i~~~~~v~~~~~~  180 (241)
                      |+|.+|+++++.|++.||++.++.+.++ +|++++++++++|+|+++.+.++...+++++++  .+.+..+++++++.. 
T Consensus        55 G~D~~g~~i~~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  133 (293)
T TIGR02152        55 GDDAFGDELLENLKSNGIDTEYVGTVKDTPTGTAFITVDDTGENRIVVVAGANAELTPEDIDAAEALIAESDIVLLQLE-  133 (293)
T ss_pred             cCCccHHHHHHHHHHcCCCeeEEEEcCCCCCceEEEEEcCCCCEEEEEECCcCCcCCHHHHHHHHhhhccCCEEEEecC-
Confidence            9999999999999999999999987655 899999999888999988888876677777665  346789999999854 


Q ss_pred             ccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          181 FNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       181 ~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      .+.+.+..+++.+++.++++++|++...  ...   ..++++  ++|++++|++|++.|+|
T Consensus       134 ~~~~~~~~~~~~~~~~~~~v~~D~~~~~--~~~---~~~~~~--~~d~l~~n~~E~~~l~~  187 (293)
T TIGR02152       134 IPLETVLEAAKIAKKHGVKVILNPAPAI--KDL---DDELLS--LVDIITPNETEAEILTG  187 (293)
T ss_pred             CCHHHHHHHHHHHHHcCCEEEEECCcCc--ccc---hHHHHh--cCCEEccCHHHHHHHhC
Confidence            3667888999999999999999997541  011   245566  99999999999998864

This model describes ribokinase, an enzyme catalyzing the first step in ribose catabolism. The rbsK gene encoding ribokinase typically is found with ribose transport genes. Ribokinase belongs to the carbohydrate kinase pfkB family (pfam00294). In the wide gulf between the current trusted (360 bit) and noise (100 bit) cutoffs are a number of sequences, few of which are clustered with predicted ribose transport genes but many of which are currently annotated as if having ribokinase activity. Most likely some have this function and others do not.

>cd01167 bac_FRK Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate

Probab=99.93  E-value=3e-24  Score=181.27  Aligned_cols=187  Identities=22%  Similarity=0.321  Sum_probs=147.5

Q ss_pred             eEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCCc
Q 026265           17 LILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVP   96 (241)
Q Consensus        17 ~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~~   96 (241)
                      +|+++| ++++|++...+.     .+                             ......+||+++|+|.+++ +||.+
T Consensus         1 ~ilviG-~~~~D~~~~~~~-----~~-----------------------------~~~~~~~GG~~~n~a~~l~-~lg~~   44 (295)
T cd01167           1 KVVCFG-EALIDFIPEGSG-----AP-----------------------------ETFTKAPGGAPANVAVALA-RLGGK   44 (295)
T ss_pred             CEEEEc-ceeEEEecCCCC-----CC-----------------------------ccccccCCCcHHHHHHHHH-hcCCC
Confidence            589999 999999977631     11                             2567899999999999999 89999


Q ss_pred             eeEEeeecCChhHHHHHHHHHhCCceeeceeecC-CCceeEEEEEcCCCCeeeeeCccccCCCCccc-CChhhhCCccEE
Q 026265           97 CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKR-GPTGQCVCLVDASGNRTMRPCLSNAVKIQADE-LIAEDVKGSKWL  174 (241)
Q Consensus        97 ~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~-~~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~-~~~~~i~~~~~v  174 (241)
                      +.++|.+|+|.+|+++++.|++.||++.++.+.+ .+|+.++++++++|+|++.++.++......+. +..+.+++++++
T Consensus        45 v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~~T~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  124 (295)
T cd01167          45 AAFIGKVGDDEFGDFLLETLKEAGVDTRGIQFDPAAPTTLAFVTLDADGERSFEFYRGPAADLLLDTELNPDLLSEADIL  124 (295)
T ss_pred             eEEEEeecCcHHHHHHHHHHHHcCCCchheeecCCCCceEEEEEECCCCCEeEEeecCCcHhhhcCccCChhHhccCCEE
Confidence            9999999999999999999999999999888554 48999999998889999988766543322222 445678899999


Q ss_pred             EEEec-cc-c--HHHHHHHHHHHHHCCCeEEEeCCchHHH----hhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          175 VLRFG-MF-N--FEVIQAAIRIAKQEGLSVSMDLASFEMV----RNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       175 ~~~~~-~~-~--~~~~~~~~~~a~~~g~~i~~D~~~~~~~----~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      |++.. .. +  .+.+.++++.+++.|.++++|++.....    ...++.+.++++  ++|++++|++|+..|+|
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~d~~~~~~~~~~~~~~~~~~~~~l~--~~d~l~~n~~E~~~l~~  197 (295)
T cd01167         125 HFGSIALASEPSRSALLELLEAAKKAGVLISFDPNLRPPLWRDEEEARERIAELLE--LADIVKLSDEELELLFG  197 (295)
T ss_pred             EEechhhccchHHHHHHHHHHHHHHcCCEEEEcCCCChhhcCCHHHHHHHHHHHHH--hCCEEEecHHHHHHHhC
Confidence            99832 21 1  3567888999999999999999743210    012334667777  99999999999998865

This is in contrast to FRKs [or ketohexokinases (KHKs)] from mammalia and halophilic archaebacteria, which phosphorylate fructose to fructose-1-phosphate.

>cd01941 YeiC_kinase_like YeiC-like sugar kinase

Probab=99.92  E-value=2.7e-24  Score=181.01  Aligned_cols=189  Identities=24%  Similarity=0.335  Sum_probs=145.8

Q ss_pred             eEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCCc
Q 026265           17 LILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVP   96 (241)
Q Consensus        17 ~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~~   96 (241)
                      .|+++| .+++|++..++     +.|.+ +...                     .......+||+++|+|++++ +||.+
T Consensus         1 ~v~~~G-~~~~D~~~~~~-----~~~~~-~~~~---------------------~~~~~~~~GG~~~Nva~~l~-~lG~~   51 (288)
T cd01941           1 EIVVIG-AANIDLRGKVS-----GSLVP-GTSN---------------------PGHVKQSPGGVGRNIAENLA-RLGVS   51 (288)
T ss_pred             CeEEEE-eEEEeeeeccc-----Ccccc-CCCC---------------------CeeEEEccCcHHHHHHHHHH-HhCCC
Confidence            389999 99999999984     44432 2111                     12467899999999999999 89999


Q ss_pred             eeEEeeecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEEEcCCCCeeeee-CccccCCCCcccCC--hhhhCCccE
Q 026265           97 CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRP-CLSNAVKIQADELI--AEDVKGSKW  173 (241)
Q Consensus        97 ~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~~~~g~r~~~~-~~g~~~~l~~~~~~--~~~i~~~~~  173 (241)
                      +.++|.+|+|.+|+.+++.|++.||++.++...+.+|+.++++++.+|+|++.. .++....++++.++  .+.+.++++
T Consensus        52 ~~~~~~lG~D~~g~~i~~~L~~~gI~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  131 (288)
T cd01941          52 VALLSAVGDDSEGESILEESEKAGLNVRGIVFEGRSTASYTAILDKDGDLVVALADMDIYELLTPDFLRKIREALKEAKP  131 (288)
T ss_pred             cEEEEEEecCccHHHHHHHHHHcCCccceeeeCCCCcceEEEEECCCCCEEEEEechHhhhhCCHHHHHHHHHHHhcCCE
Confidence            999999999999999999999999999988754458999999998889998732 34443444443322  345889999


Q ss_pred             EEEEeccccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          174 LVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       174 v~~~~~~~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      ++++.. .+++.+..+++.+++.+.++++|++...   .++ .+.++++  ++|++++|++|++.++|
T Consensus       132 v~~~~~-~~~~~~~~~~~~a~~~~~~v~~d~~~~~---~~~-~~~~~~~--~~dii~~n~~E~~~~~~  192 (288)
T cd01941         132 IVVDAN-LPEEALEYLLALAAKHGVPVAFEPTSAP---KLK-KLFYLLH--AIDLLTPNRAELEALAG  192 (288)
T ss_pred             EEEeCC-CCHHHHHHHHHhhhhcCCcEEEEccchH---Hhc-cchhhcc--cceEEeCCHHHHHHHhC
Confidence            999854 3667788889999999999999986432   111 1224666  99999999999998764

Found in eukaryotes and bacteria, YeiC-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time.

>cd01947 Guanosine_kinase_like Guanosine kinase-like sugar kinases

Probab=99.92  E-value=1.2e-23  Score=175.15  Aligned_cols=180  Identities=21%  Similarity=0.232  Sum_probs=140.2

Q ss_pred             eEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCCc
Q 026265           17 LILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVP   96 (241)
Q Consensus        17 ~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~~   96 (241)
                      +|+++| ++++|++..+     +++|.+ |....                    ..+....+||++.|+|++++ +||.+
T Consensus         1 ~il~iG-~~~iD~~~~~-----~~~~~~-~~~~~--------------------~~~~~~~~GG~~~Nva~~l~-~lG~~   52 (265)
T cd01947           1 KIAVVG-HVEWDIFLSL-----DAPPQP-GGISH--------------------SSDSRESPGGGGANVAVQLA-KLGND   52 (265)
T ss_pred             CEEEEe-eeeEEEEEEe-----cCCCCC-Cceee--------------------cccceeecCchHHHHHHHHH-HcCCc
Confidence            589999 9999999998     445533 22111                    13688999999999999999 89999


Q ss_pred             eeEEeeecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEEEcCCCCeeeeeCccccCCCCcccCChhhhCCccEEEE
Q 026265           97 CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLVL  176 (241)
Q Consensus        97 ~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~~~~i~~~~~v~~  176 (241)
                      +.++|.+|+|.+|+.+++.|++ +++..++...+..|+.++++++++|+|+++.+.+..    .+++..+.++++|++|+
T Consensus        53 ~~~i~~vG~D~~g~~i~~~l~~-~~~~~~~~~~~~~t~~~~~~~~~~g~r~~~~~~~~~----~~~~~~~~~~~~~~~~~  127 (265)
T cd01947          53 VRFFSNLGRDEIGIQSLEELES-GGDKHTVAWRDKPTRKTLSFIDPNGERTITVPGERL----EDDLKWPILDEGDGVFI  127 (265)
T ss_pred             eEEEEEecCChHHHHHHHHHHh-cCCcceEEecCCCCceEEEEECCCCcceEEecCCCC----cccCCHhHhccCCEEEE
Confidence            9999999999999999999999 998887776656899999999888999987654432    23445557889999999


Q ss_pred             EeccccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhh
Q 026265          177 RFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELV  240 (241)
Q Consensus       177 ~~~~~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~  240 (241)
                      +...    ...++++.+++.+ .+++|++...    ....+.++++  ++|++++|++|+..++
T Consensus       128 ~~~~----~~~~~~~~a~~~~-~~~~d~~~~~----~~~~~~~~~~--~~d~~~~n~~e~~~l~  180 (265)
T cd01947         128 TAAA----VDKEAIRKCRETK-LVILQVTPRV----RVDELNQALI--PLDILIGSRLDPGELV  180 (265)
T ss_pred             eccc----ccHHHHHHHHHhC-CeEeccCccc----cchhHHHHhh--hCCEEEeCHHHHHHhh
Confidence            9432    1245667777765 5778887542    1234566777  9999999999998775

Found in bacteria and archaea, the guanosine kinase-like group is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time.

>PRK09954 putative kinase; Provisional

Probab=99.92  E-value=1.1e-23  Score=182.96  Aligned_cols=188  Identities=19%  Similarity=0.196  Sum_probs=142.4

Q ss_pred             CCeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcC
Q 026265           15 AALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFG   94 (241)
Q Consensus        15 ~~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG   94 (241)
                      ...|+++| ++++|+++.++    .++|.+  ++.                     +......+||++.|+|++++ |||
T Consensus        57 ~~~v~viG-~~~vD~~~~~~----~~~p~~--~~~---------------------~~~~~~~~GG~~~NvA~~la-rLG  107 (362)
T PRK09954         57 QEYCVVVG-AINMDIRGMAD----IRYPQA--ASH---------------------PGTIHCSAGGVGRNIAHNLA-LLG  107 (362)
T ss_pred             CccEEEEE-EEEEEEEEeeC----CcCcCC--CCC---------------------CceEEEecCcHHHHHHHHHH-HcC
Confidence            34799999 99999999883    145422  110                     13577889999999999999 899


Q ss_pred             CceeEEeeecCChhHHHHHHHHHhCCceeeceeecCC-CceeEEEEEcCCCCeeeeeCcc--ccCCCCcccCC--hhhhC
Q 026265           95 VPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLS--NAVKIQADELI--AEDVK  169 (241)
Q Consensus        95 ~~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~-~T~~~~~~~~~~g~r~~~~~~g--~~~~l~~~~~~--~~~i~  169 (241)
                      .++.++|.||+|.+|+++++.|++.||+++++.+.++ +|+.+++++++++ ++++.+.+  +...++++.+.  .+.+.
T Consensus       108 ~~v~~ig~VG~D~~G~~i~~~l~~~GVd~~~~~~~~~~~T~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (362)
T PRK09954        108 RDVHLLSAIGDDFYGETLLEETRRAGVNVSGCIRLHGQSTSTYLAIANRQD-ETVLAINDTHILQQLTPQLLNGSRDLIR  186 (362)
T ss_pred             CCeEEEEEECCCHHHHHHHHHHHHcCCCccceEEcCCCCCeEEEEEEcCCC-CEEEEEcCchhhhcCCHHHHHHHHHHHh
Confidence            9999999999999999999999999999998887766 7999888887555 44444333  33456655444  24478


Q ss_pred             CccEEEEEeccccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          170 GSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       170 ~~~~v~~~~~~~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      .+++++++.. .+.+.+..+++.+  .++++++|+++..    ..+.+.++++  ++|++++|++|++.|+|
T Consensus       187 ~~~~v~~~~~-~~~~~~~~~~~~a--~~~~v~~D~~~~~----~~~~~~~~l~--~~dil~~n~~Ea~~l~g  249 (362)
T PRK09954        187 HAGVVLADCN-LTAEALEWVFTLA--DEIPVFVDTVSEF----KAGKIKHWLA--HIHTLKPTQPELEILWG  249 (362)
T ss_pred             cCCEEEEECC-CCHHHHHHHHHhC--CCCcEEEECCCHH----Hhhhhhhhhc--cccEEecCHHHHHHHcC
Confidence            8999999864 3566666666554  4799999997642    1123556677  99999999999998875

>PF00294 PfkB: pfkB family carbohydrate kinase; InterPro: IPR011611 This entry includes a variety of carbohydrate and pyrimidine kinases

Probab=99.91  E-value=4.9e-24  Score=180.28  Aligned_cols=190  Identities=29%  Similarity=0.410  Sum_probs=154.3

Q ss_pred             CeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCC
Q 026265           16 ALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGV   95 (241)
Q Consensus        16 ~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~   95 (241)
                      .+|+++| .+++|++..++.     +   .+....                    ......++||++.|+|++|+ +||.
T Consensus         2 ~~v~~iG-~~~iD~~~~~~~-----~---~~~~~~--------------------~~~~~~~~GG~~~n~a~~l~-~LG~   51 (301)
T PF00294_consen    2 KKVLVIG-EVNIDIIGYVDR-----F---KGDLVR--------------------VSSVKRSPGGAGANVAIALA-RLGA   51 (301)
T ss_dssp             EEEEEES-EEEEEEEEESSS-----H---TTSEEE--------------------ESEEEEEEESHHHHHHHHHH-HTTS
T ss_pred             CcEEEEC-ccceEEEeecCC-----c---CCccee--------------------cceEEEecCcHHHHHHHHHH-hccC
Confidence            4799999 999999999953     1   111111                    13788999999999999999 8999


Q ss_pred             ceeEEeeecCChhHHHHHHHHHhCCceeeceeecCC-CceeEEEEEcCCCCeeeeeCccccCCCCcccCChhhhCCccEE
Q 026265           96 PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWL  174 (241)
Q Consensus        96 ~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~-~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~~~~i~~~~~v  174 (241)
                      ++.+++.+|+|.+|+.+++.|++.||+++++.+.++ +|+.++++++++|+|+++.+.++...++.+++....+.+++++
T Consensus        52 ~v~~i~~vG~D~~g~~i~~~l~~~gv~~~~i~~~~~~~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (301)
T PF00294_consen   52 DVALIGKVGDDFFGEIILEELKERGVDTSYIPRDGDEPTGRCLIIVDPDGERTFVFSPGANSDLTPDELDEEAIDEADIL  131 (301)
T ss_dssp             EEEEEEEEESSHHHHHHHHHHHHTTEEETTEEEESSSEEEEEEEEEETTSEEEEEEEEGGGGGGGHHHHHHHHHHTESEE
T ss_pred             cceEEeeccCcchhhhhhhccccccccccccccccccccceeEeeecccccceeeeccccccccccccccccccccccce
Confidence            999999999999999999999999999999997765 8999999999889999998888777777766666788999999


Q ss_pred             EEEe-cc---ccHHHHHHHHHHHHHCC--CeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          175 VLRF-GM---FNFEVIQAAIRIAKQEG--LSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       175 ~~~~-~~---~~~~~~~~~~~~a~~~g--~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      |++. .+   .+...+..+.+.+++.+  .+++.++.+.    .+++.+.++++  ++|++++|++|++.|+|
T Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~--~~dil~~n~~E~~~l~~  198 (301)
T PF00294_consen  132 HLSGVSLPEGIPEDLLEALAKAAKKNGPFDPVFRDPSWD----DLREDLKELLP--YADILKPNEEEAEALTG  198 (301)
T ss_dssp             EEESGHCSTTSHHHHHHHHHHHHHHTTEEEEEEEGGGSH----HHHHHHHHHHH--TSSEEEEEHHHHHHHHT
T ss_pred             eecccccccccccceeeeccccccccccccccccccccc----ccchhhhhhcc--ccchhcccccccccccc
Confidence            9996 32   23566677777777777  3455555443    14567778787  99999999999999875

The family includes phosphomethylpyrimidine kinase (2.7.4.7 from EC). This enzyme is part of the Thiamine pyrophosphate (TPP) synthesis pathway, TPP is an essential cofactor for many enzymes []. ; PDB: 1VM7_B 2ABQ_B 3GO7_B 3GO6_B 3FHY_A 4EOH_B 2YXU_A 2F7K_A 3KEU_A 2YXT_B ....

>TIGR03828 pfkB 1-phosphofructokinase

Probab=99.91  E-value=2.7e-23  Score=176.26  Aligned_cols=180  Identities=24%  Similarity=0.280  Sum_probs=141.1

Q ss_pred             ecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCCceeEE
Q 026265           21 LQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVPCGLI  100 (241)
Q Consensus        21 iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~~~~~v  100 (241)
                      +++++.+|+++.+     +++|  .|....                    ..+...++||+++|+|++++ +||.++.++
T Consensus         4 ~~~~~~~D~~~~~-----~~~~--~g~~~~--------------------~~~~~~~~GG~~~NvA~~la-~lG~~v~~i   55 (304)
T TIGR03828         4 VTLNPAIDLTIEL-----DGLT--LGEVNR--------------------VESTRIDAGGKGINVSRVLK-NLGVDVVAL   55 (304)
T ss_pred             EEcchHHeEEEEc-----cccc--cCceee--------------------cccccccCCccHHHHHHHHH-HcCCCeEEE
Confidence            4458999999999     4565  343222                    13678999999999999999 899999999


Q ss_pred             eeecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEEEcCCCCeeeeeCccccCCCCcccCCh------hhhCCccEE
Q 026265          101 GAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA------EDVKGSKWL  174 (241)
Q Consensus       101 g~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~~------~~i~~~~~v  174 (241)
                      |.+|+| +|+.+++.|++.||+++++... ..|++++++++++|+|+++.+.++  .++.++++.      +.+++++++
T Consensus        56 s~vG~D-~g~~~~~~L~~~gId~~~~~~~-~~t~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~v  131 (304)
T TIGR03828        56 GFLGGF-TGDFIEALLREEGIKTDFVRVP-GETRINVKIKEPSGTETKLNGPGP--EISEEELEALLEKLRAQLAEGDWL  131 (304)
T ss_pred             EEecCc-hhHHHHHHHHHCCCcceEEECC-CCCeeeEEEEeCCCCEEEEECCCC--CCCHHHHHHHHHHHHHhccCCCEE
Confidence            999999 6999999999999999988876 468888888888888887766654  355444331      257899999


Q ss_pred             EEE-ecc--ccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          175 VLR-FGM--FNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       175 ~~~-~~~--~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      |++ +..  .+.+.+..+++.+++.+.+++||++..        .+++.+.+ ..|++++|+.|++.|+|
T Consensus       132 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~~D~~~~--------~~~~~~~~-~~~i~~~n~~E~~~l~g  192 (304)
T TIGR03828       132 VLSGSLPPGVPPDFYAELIALAREKGAKVILDTSGE--------ALRDGLKA-KPFLIKPNDEELEELFG  192 (304)
T ss_pred             EEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECChH--------HHHHHHhc-CCcEECcCHHHHHHHhC
Confidence            999 321  356788899999999999999999754        13333331 67999999999999875

This enzyme acts in concert with the fructose-specific phosphotransferase system (PTS) which imports fructose as fructose-1-phosphate. The action of 1-phosphofructokinase results in beta-D-fructose-1,6-bisphosphate and is an entry point into glycolysis (GenProp0688).

>cd01943 MAK32 MAK32 kinase

Probab=99.91  E-value=6.9e-24  Score=181.89  Aligned_cols=182  Identities=20%  Similarity=0.172  Sum_probs=148.2

Q ss_pred             eEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhc-CC
Q 026265           17 LILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGF-GV   95 (241)
Q Consensus        17 ~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~L-G~   95 (241)
                      +++++| .+++|++...+.                                    ..+...+||+++|+|++++ +| |.
T Consensus         1 ~~~~~G-~~~~d~i~~~~~------------------------------------~~~~~~~GG~~~N~A~~~~-~l~g~   42 (328)
T cd01943           1 DFTTLG-MFIIDEIEYPDS------------------------------------EPVTNVLGGAGTYAILGAR-LFLPP   42 (328)
T ss_pred             CccccC-cEEeeccccCCC------------------------------------CccccccCCchhhHhhcee-eecCC
Confidence            578999 999999988731                                    1466889999999999998 89 54


Q ss_pred             --ce--eEEeeecCChhHHHHHHHHHhCCceeeceeecCC-CceeEEEEEcCCCCeeeeeCccccCCCCcccCChhhhCC
Q 026265           96 --PC--GLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKG  170 (241)
Q Consensus        96 --~~--~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~-~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~~~~i~~  170 (241)
                        ++  .+++.+|+| +|+++++.|++.||++.+ .+.++ +|+.++++++++|+|.++.+.++...+++++++...+..
T Consensus        43 ~~~~~~~~~~~vG~D-~G~~l~~~L~~~GVd~~~-~~~~~~~Tg~~~v~~~~~g~r~~~~~~~~~~~~~~~~l~~~~~~~  120 (328)
T cd01943          43 PLSRSISWIVDKGSD-FPKSVEDELESWGTGMVF-RRDPGRLTTRGLNIYDGNDRRFFKYLTPKKRIDVSDDLNSTPLIR  120 (328)
T ss_pred             ccccceeeEEecCCC-CCHHHHHHHHhcCCceEE-EeCCCCcchhhhhhcCCCCcceeeecCcccccccccccccccccC
Confidence              77  889999999 999999999999999988 55444 899999998888899888887877788888887777889


Q ss_pred             ccEEEEEeccccH--HHHHHHHHHHHH------CCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          171 SKWLVLRFGMFNF--EVIQAAIRIAKQ------EGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       171 ~~~v~~~~~~~~~--~~~~~~~~~a~~------~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      ++++|++... +.  +...++++.+++      .+.++++|+++........+.+.++++  ++|++++|++|++.|+|
T Consensus       121 a~~~hl~~~~-~~~~~~~~~~~~~a~~~~~d~~~g~~~~~d~~~~~~~~~~~~~l~~~l~--~~dil~~n~~Ea~~l~g  196 (328)
T cd01943         121 SSCIHLICSP-ERCASIVDDIINLFKLLKGNSPTRPKIVWEPLPDSCDPENLEDLLQALP--RVDVFSPNLEEAARLLG  196 (328)
T ss_pred             CCeEEEECCH-HHHHHHHHHHHHHHHhhccccCCccEEEEecCCcccChhhHHHHHHHhc--cCCEECCCHHHHHHHhC
Confidence            9999998432 22  677888888888      899999999754110012345778888  99999999999999875

MAK32 is a protein found primarily in fungi that is necessary for the structural stability of L-A particles. The L-A virus particule is a specialized compartment for the transcription and replication of double-stranded RNA, known to infect yeast and other fungi. MAK32 is part of the host machinery used by the virus to multiply.

>PRK09434 aminoimidazole riboside kinase; Provisional

Probab=99.91  E-value=6.6e-23  Score=174.06  Aligned_cols=183  Identities=26%  Similarity=0.328  Sum_probs=143.1

Q ss_pred             CeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCC
Q 026265           16 ALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGV   95 (241)
Q Consensus        16 ~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~   95 (241)
                      .+|+++| +.++|++...            +                         ......+||++.|+|++++ +||.
T Consensus         3 ~~il~iG-~~~iD~~~~~------------~-------------------------~~~~~~~GG~~~N~a~~l~-~LG~   43 (304)
T PRK09434          3 NKVWVLG-DAVVDLIPEG------------E-------------------------NRYLKCPGGAPANVAVGIA-RLGG   43 (304)
T ss_pred             CcEEEec-chheeeecCC------------C-------------------------CceeeCCCChHHHHHHHHH-HcCC
Confidence            4799999 9999997211            0                         1345789999999999999 8999


Q ss_pred             ceeEEeeecCChhHHHHHHHHHhCCceeeceeecCC-CceeEEEEEcCCCCeeeeeC--ccccCCCCcccCChhhhCCcc
Q 026265           96 PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPC--LSNAVKIQADELIAEDVKGSK  172 (241)
Q Consensus        96 ~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~-~T~~~~~~~~~~g~r~~~~~--~g~~~~l~~~~~~~~~i~~~~  172 (241)
                      ++.++|.+|+|.+|+++++.|++.||++.++...++ +|+.+++.++++|+|++.+.  +++...++.++++  .+++.+
T Consensus        44 ~~~~v~~vG~D~~g~~i~~~l~~~gI~~~~~~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~~  121 (304)
T PRK09434         44 ESGFIGRVGDDPFGRFMQQTLQDEGVDTTYLRLDPAHRTSTVVVDLDDQGERSFTFMVRPSADLFLQPQDLP--PFRQGE  121 (304)
T ss_pred             CceEEEEecCchHHHHHHHHHHHcCCCCcceEEcCCCCceEEEEEECCCCCEeEEEecCCchhhhCCHHHhh--hhcCCC
Confidence            999999999999999999999999999998887655 89999999987799986543  3444445555553  367899


Q ss_pred             EEEEE-eccc-c--HHHHHHHHHHHHHCCCeEEEeCCchHHH----hhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          173 WLVLR-FGMF-N--FEVIQAAIRIAKQEGLSVSMDLASFEMV----RNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       173 ~v~~~-~~~~-~--~~~~~~~~~~a~~~g~~i~~D~~~~~~~----~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      ++|++ +.+. +  .....++++.+++.|.+++||++.....    ..+++.+.++++  ++|++++|++|++.|+|
T Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~D~~~~~~~~~~~~~~~~~~~~~l~--~~dil~~n~~e~~~l~g  196 (304)
T PRK09434        122 WLHLCSIALSAEPSRSTTFEAMRRIKAAGGFVSFDPNLREDLWQDEAELRECLRQALA--LADVVKLSEEELCFLSG  196 (304)
T ss_pred             EEEEccccccCchHHHHHHHHHHHHHHcCCEEEECCCCChhhccCHHHHHHHHHHHHH--hcceeeCCHHHHHHHhC
Confidence            99998 3221 2  3456788999999999999999754211    133455666777  99999999999998864

>cd01940 Fructoselysine_kinase_like Fructoselysine kinase-like

Probab=99.90  E-value=9.5e-23  Score=169.63  Aligned_cols=153  Identities=20%  Similarity=0.204  Sum_probs=121.8

Q ss_pred             eeecCChHHHHHHHHHhhcCCceeEEeeecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEEEcCCCCeeeeeCc-c
Q 026265           75 KTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCL-S  153 (241)
Q Consensus        75 ~~~~GG~~~N~a~~la~~LG~~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~~~~g~r~~~~~~-g  153 (241)
                      ..++||+++|+|.+++ +||.++.++|.+|+|.+|+++++.|++.||+++++.+.+++|+.+++.. ++|+|+++.+. +
T Consensus        18 ~~~~GG~~~Nva~~la-~lG~~~~~~~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~-~~g~r~~~~~~~~   95 (264)
T cd01940          18 KMYPGGNALNVAVYAK-RLGHESAYIGAVGNDDAGAHVRSTLKRLGVDISHCRVKEGENAVADVEL-VDGDRIFGLSNKG   95 (264)
T ss_pred             eecCCCcHHHHHHHHH-HcCCCeeEEecccCchhHHHHHHHHHHcCCChhheEEcCCCCceEEEEe-cCCceEEEeecCC
Confidence            4689999999999999 8999999999999999999999999999999999987667899888654 67899887653 4


Q ss_pred             ccCCCCcccCChhhhCCccEEEEEeccccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCH
Q 026265          154 NAVKIQADELIAEDVKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANE  233 (241)
Q Consensus       154 ~~~~l~~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~  233 (241)
                      +.....+.+.....+++++++|++.. .+.+.+.++++.+++.|+++++|++...    ..+.+.++++  ++|++++|+
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~~~~~a~~~g~~v~~D~~~~~----~~~~~~~~~~--~~d~~~~~~  168 (264)
T cd01940          96 GVAREHPFEADLEYLSQFDLVHTGIY-SHEGHLEKALQALVGAGALISFDFSDRW----DDDYLQLVCP--YVDFAFFSA  168 (264)
T ss_pred             cHHhcccCcccHhHHhcCCEEEEccc-ccHHHHHHHHHHHHHcCCEEEEcCcccC----CHHHHHhhcc--cCCEEEech
Confidence            43333332333456789999999932 2356788899999999999999998652    1223556677  999999997


Q ss_pred             HHH
Q 026265          234 DEA  236 (241)
Q Consensus       234 ~Ea  236 (241)
                      +|.
T Consensus       169 ~~~  171 (264)
T cd01940         169 SDL  171 (264)
T ss_pred             hhc
Confidence            765

Fructoselysine is a fructoseamine formed by glycation, a non-enzymatic reaction of glucose with a primary amine followed by an Amadori rearrangement, resulting in a protein that is modified at the amino terminus and at the lysine side chains. Fructoseamines are typically metabolized by fructoseamine-3-kinase, especially in higher eukaryotes. In E. coli, fructoselysine kinase has been shown in vitro to catalyze the phosphorylation of fructoselysine. It is proposed that fructoselysine is released from glycated proteins during human digestion and is partly metabolized by bacteria in the hind gut using a protein such as fructoselysine kinase. This family is found only in bacterial sequences, and its oligomeric state is currently unknown.

>cd01172 RfaE_like RfaE encodes a bifunctional ADP-heptose synthase involved in the biosynthesis of the lipopolysaccharide (LPS) core precursor ADP-L-glycero-D-manno-heptose

Probab=99.90  E-value=1.4e-22  Score=171.80  Aligned_cols=188  Identities=23%  Similarity=0.327  Sum_probs=139.3

Q ss_pred             eEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCCc
Q 026265           17 LILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVP   96 (241)
Q Consensus        17 ~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~~   96 (241)
                      +|+++| +.++|+++.++.   +++|.+.....                   +........+|| ++|+|.+++ |||.+
T Consensus         1 ~vl~iG-~~~~D~~~~~~~---~~~~~~~~~~~-------------------~~~~~~~~~~GG-~~NvA~~la-~LG~~   55 (304)
T cd01172           1 KVLVVG-DVILDEYLYGDV---ERISPEAPVPV-------------------VKVEREEIRLGG-AANVANNLA-SLGAK   55 (304)
T ss_pred             CEEEEc-ceeEEeeEeecc---ccccCCCCcce-------------------EEeeeEEecCcH-HHHHHHHHH-HhCCC
Confidence            589999 999999998642   24432211100                   001256678999 689999999 89999


Q ss_pred             eeEEeeecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEEEcCCCCeeeeeCccccCCCCcccC------ChhhhCC
Q 026265           97 CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADEL------IAEDVKG  170 (241)
Q Consensus        97 ~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~------~~~~i~~  170 (241)
                      +.++|.+|+|.+|+++++.|++.||++.++.....+|+.+++++++ +++.+..+.+....++....      ....+++
T Consensus        56 ~~~i~~vG~D~~g~~i~~~l~~~gI~~~~~~~~~~~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  134 (304)
T cd01172          56 VTLLGVVGDDEAGDLLRKLLEKEGIDTDGIVDEGRPTTTKTRVIAR-NQQLLRVDREDDSPLSAEEEQRLIERIAERLPE  134 (304)
T ss_pred             eEEEEEEcCCccHHHHHHHHHhCCCCcceEecCCCCceEEEEEecC-CcEEEEEecCCCCCCCHHHHHHHHHHHHHhhcc
Confidence            9999999999999999999999999998854433479998888874 56666555443344443211      1245789


Q ss_pred             ccEEEEE-ec--cccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          171 SKWLVLR-FG--MFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       171 ~~~v~~~-~~--~~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      +|++|++ +.  ..+++.+..+++.+++.|++++||++...         +..++  ++|++++|++|++.++|
T Consensus       135 ~~~v~~s~~~~~~~~~~~~~~~~~~a~~~~~~v~~D~~~~~---------~~~~~--~~d~l~~n~~E~~~l~~  197 (304)
T cd01172         135 ADVVILSDYGKGVLTPRVIEALIAAARELGIPVLVDPKGRD---------YSKYR--GATLLTPNEKEAREALG  197 (304)
T ss_pred             CCEEEEEcCCCCccCHHHHHHHHHHHHhcCCCEEEeCCCcc---------hhhcc--CCcEeCCCHHHHHHHhC
Confidence            9999997 32  13567888999999999999999997541         14455  89999999999998865

LPS plays an important role in maintaining the structural integrity of the bacterial outer membrane of gram-negative bacteria. RfaE consists of two domains, a sugar kinase domain, represented here, and a domain belonging to the cytidylyltransferase superfamily.

>PRK09513 fruK 1-phosphofructokinase; Provisional

Probab=99.90  E-value=3.4e-22  Score=170.35  Aligned_cols=185  Identities=15%  Similarity=0.070  Sum_probs=143.4

Q ss_pred             CeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCC
Q 026265           16 ALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGV   95 (241)
Q Consensus        16 ~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~   95 (241)
                      .+|+++++||++|+++.+     +++|  .|....                    .....+++||+++|+|++++ +||.
T Consensus         3 ~~~~~~~~~p~~D~~~~~-----~~~~--~~~~~~--------------------~~~~~~~~GG~~~Nva~~la-~lG~   54 (312)
T PRK09513          3 RRVATITLNPAYDLVGFC-----PEIE--RGEVNL--------------------VKTTGLHAAGKGINVAKVLK-DLGI   54 (312)
T ss_pred             ceEEEEecChHHeEEEEc-----Ccee--cCCeee--------------------ecceeecCCchHHHHHHHHH-HcCC
Confidence            568888889999999999     4565  243222                    23788999999999999999 8999


Q ss_pred             ceeEEeeecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEEEcCCCCeeeeeCccccCCCCcccCC------hhhhC
Q 026265           96 PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELI------AEDVK  169 (241)
Q Consensus        96 ~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~------~~~i~  169 (241)
                      ++.++|.+|+|.+|++ ++.|++.||++.++. .+++|+.++++++++|+|+++.+.+.  .+++.+.+      .+.++
T Consensus        55 ~~~~i~~vG~D~~~~~-~~~l~~~gv~~~~~~-~~~~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~  130 (312)
T PRK09513         55 DVTVGGFLGKDNQDGF-QQLFSELGIANRFQV-VQGRTRINVKLTEKDGEVTDFNFSGF--EVTPADWERFVTDSLSWLG  130 (312)
T ss_pred             CeEEEEEecCccHHHH-HHHHHHcCCCccEEE-CCCCCEEEEEEEeCCCcEEEEeCCCC--CCCHHHHHHHHHHHHhhcC
Confidence            9999999999999997 689999999987654 44578999898887888887766553  34443322      24578


Q ss_pred             CccEEEEEecc---ccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          170 GSKWLVLRFGM---FNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       170 ~~~~v~~~~~~---~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      ++|++|+++..   .+.+.+.++++.+++.|.+++||++...        +++.+. ...+++++|++|+..|+|
T Consensus       131 ~~d~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~--------~~~~~~-~~~~~l~~n~~E~~~l~g  196 (312)
T PRK09513        131 QFDMVAVSGSLPRGVSPEAFTDWMTRLRSQCPCIIFDSSREA--------LVAGLK-AAPWLVKPNRRELEIWAG  196 (312)
T ss_pred             CCCEEEEECCCCCCCCHHHHHHHHHHHHhcCCEEEEECChHH--------HHHHhc-cCCeEEcCCHHHHHHHhC
Confidence            99999999432   1357788889999999999999997531        333333 278999999999998875

>PRK10294 6-phosphofructokinase 2; Provisional

Probab=99.89  E-value=4.8e-22  Score=169.20  Aligned_cols=186  Identities=22%  Similarity=0.253  Sum_probs=143.3

Q ss_pred             eEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCCc
Q 026265           17 LILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVP   96 (241)
Q Consensus        17 ~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~~   96 (241)
                      +|+++.+||.+|+++.+     ++++  .|+...+                    ......+||++.|+|++++ +||.+
T Consensus         3 ~i~~~~~~p~~d~~~~~-----~~~~--~~~~~~~--------------------~~~~~~~GG~~~NvA~~l~-~lG~~   54 (309)
T PRK10294          3 RIYTLTLAPSLDSATIT-----PQIY--PEGKLRC--------------------SAPVFEPGGGGINVARAIA-HLGGS   54 (309)
T ss_pred             eEEEEecChHHeEEEEe-----Ccee--eCCeEEe--------------------ccceecCCccHHHHHHHHH-HcCCC
Confidence            57888889999999999     4553  4443332                    3677889999999999999 89999


Q ss_pred             eeEEeeecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEEEcCCCCeeeeeCccccCCCCcccCCh-----hhhCCc
Q 026265           97 CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA-----EDVKGS  171 (241)
Q Consensus        97 ~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~~-----~~i~~~  171 (241)
                      +.+++.+|+ .+|+++++.|++.||++.++...+..++.++++++++|+|+++.++++  .++.++++.     ..++++
T Consensus        55 ~~~i~~vG~-~~g~~i~~~l~~~gv~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~  131 (309)
T PRK10294         55 ATAIFPAGG-ATGEHLVSLLADENVPVATVEAKDWTRQNLHVHVEASGEQYRFVMPGA--ALNEDEFRQLEEQVLEIESG  131 (309)
T ss_pred             eEEEEEecC-ccHHHHHHHHHHcCCCceEEECCCCCeeeEEEEEcCCCcEEEEECCCC--CCCHHHHHHHHHHHHhcCCC
Confidence            999999996 799999999999999999988765545555667777888887777664  355544432     236789


Q ss_pred             cEEEEEecc---ccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          172 KWLVLRFGM---FNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       172 ~~v~~~~~~---~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      +++|++..+   .+.+.+.++++.+++.|++++||++...    .+..+  .++  ++|++++|++|+..|+|
T Consensus       132 ~~~~i~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~----~~~~~--~~~--~~~~i~~n~~E~~~l~g  196 (309)
T PRK10294        132 AILVISGSLPPGVKLEKLTQLISAAQKQGIRCIIDSSGDA----LSAAL--AIG--NIELVKPNQKELSALVN  196 (309)
T ss_pred             CEEEEeCCCCCCCCHHHHHHHHHHHHHcCCeEEEeCCCHH----HHHHH--hcC--CCeEECCCHHHHHHHhC
Confidence            999998332   2357888999999999999999997541    11111  133  79999999999998875

>PRK13508 tagatose-6-phosphate kinase; Provisional

Probab=99.89  E-value=5.1e-22  Score=169.05  Aligned_cols=183  Identities=20%  Similarity=0.255  Sum_probs=139.3

Q ss_pred             EEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCCce
Q 026265           18 ILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVPC   97 (241)
Q Consensus        18 v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~~~   97 (241)
                      |+++.+||++|.++.+     ++++.  +++..+                    ......+||+++|+|++++ +||.++
T Consensus         2 ~~~~t~np~~D~~~~~-----~~~~~--~~~~~~--------------------~~~~~~~GG~~~NvA~~la-~LG~~~   53 (309)
T PRK13508          2 ILTVTLNPSIDISYPL-----DELKL--DTVNRV--------------------VDVSKTAGGKGLNVTRVLS-EFGENV   53 (309)
T ss_pred             EEEEecChHHeEEEEe-----CCeee--CCeEEe--------------------cceeecCCchHHHHHHHHH-HcCCCe
Confidence            5556569999999999     45542  233221                    2577899999999999999 899999


Q ss_pred             eEEeeecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEEEcCCCCeeeeeCccccCCCCcccCC------hhhhCCc
Q 026265           98 GLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELI------AEDVKGS  171 (241)
Q Consensus        98 ~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~------~~~i~~~  171 (241)
                      .++|.+|+ .+|+.+++.|++ ||++.++.. ++.|+.++++++ +|+|+++.++++.  ++.++..      .+.++++
T Consensus        54 ~~~~~vGd-~~G~~i~~~l~~-gI~~~~~~~-~~~t~~~~~~~~-~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  127 (309)
T PRK13508         54 LATGLIGG-ELGQFIAEHLDD-QIKHAFYKI-KGETRNCIAILH-EGQQTEILEKGPE--ISVQEADGFLHHFKQLLESV  127 (309)
T ss_pred             EEEEEecC-hhHHHHHHHHHc-CCCceEEEC-CCCCeeeEEEEe-CCCEEEEECCCCC--CCHHHHHHHHHHHHHhccCC
Confidence            99999995 789999999999 999887654 346888888886 7899988777652  3333221      2357899


Q ss_pred             cEEEEEecc---ccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          172 KWLVLRFGM---FNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       172 ~~v~~~~~~---~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      |++|++...   .+.+.+..+++.+++.|++++||+++..    . ..+...+.  ++|++++|++|++.++|
T Consensus       128 ~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~----~-~~~~~~~~--~~dii~~n~~E~~~l~g  193 (309)
T PRK13508        128 EVVAISGSLPAGLPVDYYAQLIELANQAGKPVVLDCSGAA----L-QAVLESPY--KPTVIKPNIEELSQLLG  193 (309)
T ss_pred             CEEEEeCCCCCCcCHHHHHHHHHHHHHCCCEEEEECCcHH----H-HHHHhccC--CceEEccCHHHHHHHhC
Confidence            999999432   2346678889999999999999998542    1 22333344  89999999999998875

>TIGR01231 lacC tagatose-6-phosphate kinase

Probab=99.89  E-value=8.4e-22  Score=167.71  Aligned_cols=182  Identities=16%  Similarity=0.239  Sum_probs=138.7

Q ss_pred             EecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCCceeE
Q 026265           20 GLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVPCGL   99 (241)
Q Consensus        20 ~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~~~~~   99 (241)
                      .+-+||.+|.++.+     ++++  .+++..+                    ......+||+++|+|++|+ +||.++.+
T Consensus         3 ~~~~~p~~d~~~~~-----~~~~--~~~~~~~--------------------~~~~~~~GG~~~NvA~~la-~LG~~v~~   54 (309)
T TIGR01231         3 TVTLNPSVDISYPL-----TALK--LDTVNRV--------------------QEVSKTAGGKGLNVTRVLA-QVGDPVLA   54 (309)
T ss_pred             EEEcchHHeEEEEc-----CCee--eCceEee--------------------ceeeecCCccHHHHHHHHH-HcCCCeEE
Confidence            33458999999998     4454  2333221                    3678999999999999999 89999999


Q ss_pred             EeeecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEEEcCCCCeeeeeCccccCCCCccc----CC--hhhhCCccE
Q 026265          100 IGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADE----LI--AEDVKGSKW  173 (241)
Q Consensus       100 vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~----~~--~~~i~~~~~  173 (241)
                      +|.+|+ ++|+++++.|++.||++.++... ..|+.++.+++ +|+|+++.++++.  +..+.    +.  .+.++++++
T Consensus        55 i~~vG~-~~G~~i~~~l~~~GV~~~~~~~~-~~t~~~~~~~~-~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  129 (309)
T TIGR01231        55 SGFLGG-KLGEFIEKELDHSDIKHAFYKIS-GETRNCIAILH-EGQQTEILEQGPE--ISNQEAAGFLKHFEQLLEKVEV  129 (309)
T ss_pred             EEEecC-hhHHHHHHHHHHcCCceeEEECC-CCCEEeEEEEe-CCCEEEEeCCCCC--CCHHHHHHHHHHHHHHhccCCE
Confidence            999996 59999999999999999887764 46778888775 7899988777753  22111    11  245789999


Q ss_pred             EEEEecc---ccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          174 LVLRFGM---FNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       174 v~~~~~~---~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      +|++..+   .+...+..+++.+++.|+++++|++...    . ..+.+.+.  ++|++++|++|++.|+|
T Consensus       130 v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~----~-~~~~~~~~--~~dil~~n~~E~~~l~g  193 (309)
T TIGR01231       130 VAISGSLPKGLPQDYYAQIIERCQNKGVPVVLDCSGAT----L-QTVLENPA--KPTVIKPNIEELSQLLN  193 (309)
T ss_pred             EEEECCCCCCcCHHHHHHHHHHHHhCCCeEEEECChHH----H-HHHHhccC--CCeEEcCCHHHHHHHhC
Confidence            9999432   2467788999999999999999998642    1 22333344  89999999999998875

This enzyme is part of the tagatose-6-phosphate pathway of lactose degradation.

>TIGR02198 rfaE_dom_I rfaE bifunctional protein, domain I

Probab=99.88  E-value=2.3e-21  Score=165.29  Aligned_cols=189  Identities=22%  Similarity=0.267  Sum_probs=136.9

Q ss_pred             CCeEEEecCCeeeEEEeecCHhHHhhCCCC-CCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhc
Q 026265           15 AALILGLQPAALIDHVARVDWSLLDQIPGE-RGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGF   93 (241)
Q Consensus        15 ~~~v~~iG~~~~vD~~~~~~~~~l~~~~~~-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~L   93 (241)
                      +++|+++| .+++|+++..+-   ++++.. ++..                    +........+|| ++|+|.+++ +|
T Consensus         7 ~~~il~iG-~~~iD~~~~~~~---~~~~~~~~~~~--------------------~~~~~~~~~~GG-a~NvA~~l~-~l   60 (315)
T TIGR02198         7 GAKVLVVG-DVMLDRYWYGKV---SRISPEAPVPV--------------------VKVEREEDRLGG-AANVARNIA-SL   60 (315)
T ss_pred             CCcEEEEC-ceeEeeeeeecc---cccCCCCCCce--------------------EEEEEEEecCcH-HHHHHHHHH-hc
Confidence            57799999 999999987321   222110 0000                    001245678888 799999999 89


Q ss_pred             CCceeEEeeecCChhHHHHHHHHHhCCceeeceeecCC-CceeEEEEEcCCCCeeeeeCccccCCCCccc----CC--hh
Q 026265           94 GVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNAVKIQADE----LI--AE  166 (241)
Q Consensus        94 G~~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~-~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~----~~--~~  166 (241)
                      |.++.++|.+|+|.+|+++++.|++.||++.++.+.++ +|+.+++++++++ +.+.........++...    +.  .+
T Consensus        61 g~~v~~i~~vG~D~~g~~i~~~l~~~gI~~~~~~~~~~~~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  139 (315)
T TIGR02198        61 GARVFLVGVVGDDEAGKRLEALLAEEGIDTSGLIRDKDRPTTTKTRVLARNQ-QLLRVDFEERDPINAELEARLLAAIRE  139 (315)
T ss_pred             CCceEEEEEEecchhHHHHHHHHHHCCCCcceEEECCCCCcceEEEEEcCCe-EEEEecCCCCCCCCHHHHHHHHHHHHh
Confidence            99999999999999999999999999999988877655 8999999887532 22222222212233211    11  23


Q ss_pred             hhCCccEEEEE-ec--cccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          167 DVKGSKWLVLR-FG--MFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       167 ~i~~~~~v~~~-~~--~~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      .++++|++|++ +.  ..+++.+..+++.+++.|++++||+++.         .+..++  ++|++++|++|++.|+|
T Consensus       140 ~l~~~~~v~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~---------~~~~~~--~~d~l~~n~~E~~~l~~  206 (315)
T TIGR02198       140 QLASADAVVLSDYAKGVLTPRVVQEVIAAARKHGKPVLVDPKGK---------DFSRYR--GATLITPNRKEAEAAVG  206 (315)
T ss_pred             hhhhCCEEEEecCCCCccCHHHHHHHHHHHHhcCCCEEEeCCCc---------chhhcC--CCcEECCCHHHHHHHhC
Confidence            57899999998 32  1357788899999999999999999743         123455  89999999999999875

RfaE is a protein involved in the biosynthesis of ADP-L-glycero-D-manno-heptose, a precursor for LPS inner core biosynthesis. RfaE is a bifunctional protein in E. coli, and separate proteins in some other genome. The longer, N-terminal domain I (this family) is suggested to act in D-glycero-D-manno-heptose 1-phosphate biosynthesis, while domain II (TIGR02199) adds ADP to yield ADP-D-glycero-D-manno-heptose.

>TIGR03168 1-PFK hexose kinase, 1-phosphofructokinase family

Probab=99.88  E-value=1.7e-21  Score=165.24  Aligned_cols=178  Identities=23%  Similarity=0.249  Sum_probs=138.2

Q ss_pred             CCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCCceeEEee
Q 026265           23 PAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVPCGLIGA  102 (241)
Q Consensus        23 ~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~~~~~vg~  102 (241)
                      .|+.+|+++.++     ++  ..|....                    ..+...++||++.|+|++++ |||.++.++|.
T Consensus         6 ~~~~~D~~~~~~-----~~--~~~~~~~--------------------~~~~~~~~GG~~~N~a~~l~-~lg~~~~~i~~   57 (303)
T TIGR03168         6 LNPAIDLTIEVD-----GL--TPGEVNR--------------------VAAVRKDAGGKGINVARVLA-RLGAEVVATGF   57 (303)
T ss_pred             cchHHeEEEEcC-----cc--ccCceee--------------------cCcccccCCcchhhHHHHHH-HcCCCeEEEEE
Confidence            489999999994     33  2333221                    23678999999999999999 89999999999


Q ss_pred             ecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEEEcCCCCeeeeeCccccCCCCcccCCh------hhhCCccEEEE
Q 026265          103 YGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA------EDVKGSKWLVL  176 (241)
Q Consensus       103 vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~~------~~i~~~~~v~~  176 (241)
                      +|+| +|+.+++.|++.||++.++... ..|+.++++++++|+|+.+.+.+.  .++.++++.      +.++++|++|+
T Consensus        58 vG~D-~g~~i~~~l~~~gI~~~~i~~~-~~t~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~i  133 (303)
T TIGR03168        58 LGGF-TGEFIEALLAEEGIKNDFVEVK-GETRINVKIKESSGEETELNEPGP--EISEEELEQLLEKLRELLASGDIVVI  133 (303)
T ss_pred             eCCc-hhHHHHHHHHHcCCCceEEECC-CCCEEeEEEEeCCCCEEEEeCcCC--CCCHHHHHHHHHHHHHhccCCCEEEE
Confidence            9998 7999999999999999988875 467888888887788776655553  466555431      34789999999


Q ss_pred             Eecc---ccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          177 RFGM---FNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       177 ~~~~---~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      +...   .+.+.+..+++.+++.|++++||++..        .+++.+. .++|++++|+.|+..|+|
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~g~~v~~D~~~~--------~~~~~~~-~~~dil~~n~~E~~~l~g  192 (303)
T TIGR03168       134 SGSLPPGVPPDFYAQLIAIARKRGAKVILDTSGE--------ALREALA-AKPFLIKPNHEELEELFG  192 (303)
T ss_pred             eCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCcH--------HHHHHHh-cCCcEECCCHHHHHHHhC
Confidence            8321   356778889999999999999999753        1233332 179999999999999875

This family consists largely of 1-phosphofructokinases, but also includes tagatose-6-kinases and 6-phosphofructokinases.

>KOG2855 consensus Ribokinase [Carbohydrate transport and metabolism]

Probab=99.88  E-value=1.3e-21  Score=162.85  Aligned_cols=197  Identities=22%  Similarity=0.275  Sum_probs=152.8

Q ss_pred             CCeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcC
Q 026265           15 AALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFG   94 (241)
Q Consensus        15 ~~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG   94 (241)
                      ++.|+++| +.++|++..+     +++|.+ | .+                   .+++.+...+||+++|+|++++ |||
T Consensus         9 ~~~vv~fG-s~~~D~V~~~-----~~~p~~-g-e~-------------------~~~~~f~~~~GG~~aN~Avaaa-rLG   60 (330)
T KOG2855|consen    9 PPLVVVFG-SMLIDFVPST-----RRLPNA-G-ET-------------------WEPPGFKTAPGGKGANQAVAAA-RLG   60 (330)
T ss_pred             CceEEEec-cceeeeeecc-----ccCCCc-c-cc-------------------ccCCcceecCCCcchhhhhHHH-hcC
Confidence            46899999 9999999999     567643 1 11                   1235899999999999999999 999


Q ss_pred             CceeEEeeecCChhHHHHHHHHHhCCceeeceeecCC-CceeEEEEEcCCCCeeeeeCccccCCCCc--ccCChhhhCCc
Q 026265           95 VPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNAVKIQA--DELIAEDVKGS  171 (241)
Q Consensus        95 ~~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~-~T~~~~~~~~~~g~r~~~~~~g~~~~l~~--~~~~~~~i~~~  171 (241)
                      .++.|+|.||+|.+|+.+++.|++.+|+++++...++ +|+.+.+++..+|++.+.++.+++....+  .++..+.++.+
T Consensus        61 ~~~afiGkvGdD~fG~~l~~~L~~~~V~~~~v~~~~~~~T~~a~i~v~~dG~~~~~~v~gan~~~~~~~se~~~~~i~~a  140 (330)
T KOG2855|consen   61 GRVAFIGKVGDDEFGDDLLDILKQNGVDTSGVKFDENARTACATITVSKDGENRIIFVRGANADMLPEDSELNLEVIKEA  140 (330)
T ss_pred             cceeeeecccchhhHHHHHHHHhhCCcccccceecCCCceEEEEEEEccCCceEEEEEecCchhcCcccccccHHHHhhc
Confidence            9999999999999999999999999999999998877 89999999988999999988887765554  45667889999


Q ss_pred             cEEEEEecccc--HH--HHHHHHHHHHHCCCeEEEeCCchHHH----hhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          172 KWLVLRFGMFN--FE--VIQAAIRIAKQEGLSVSMDLASFEMV----RNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       172 ~~v~~~~~~~~--~~--~~~~~~~~a~~~g~~i~~D~~~~~~~----~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      +++|+......  ..  .....++.+++.|..+++|+......    ...+..+..+..  .+|++...++|++.++|
T Consensus       141 k~~~~q~ei~~~~~~~s~~~~~~~~~~~~g~~i~~~pn~~l~l~~~~~~ne~e~~~i~~--~adv~~~s~~e~~fl~~  216 (330)
T KOG2855|consen  141 KVFHCQSEILIEEPMRSLHIAAVKVAKNAGPAIFYDPNLRLPLWDSLEENESEIASIWN--MADVIKVSSQELAFLTG  216 (330)
T ss_pred             cEEEEeeecCCcchhHHHHHhhhhhhhcccccccCCCCccccccccccccHHHHHHHhh--hhhcccccHHHHHHhcc
Confidence            99999954311  11  11222456778888888888755421    112223334444  88999999988888754

>cd01164 FruK_PfkB_like 1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases

Probab=99.88  E-value=2.3e-21  Score=163.48  Aligned_cols=180  Identities=24%  Similarity=0.269  Sum_probs=138.1

Q ss_pred             EEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCCcee
Q 026265           19 LGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVPCG   98 (241)
Q Consensus        19 ~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~~~~   98 (241)
                      .++| ++++|++++++     ++|  ++....                    ..+....+||+++|+|.+|+ +||.++.
T Consensus         4 ~~~~-~~~~D~~~~~~-----~~~--~~~~~~--------------------~~~~~~~~GG~~~Nva~~la-~lG~~v~   54 (289)
T cd01164           4 TVTL-NPAIDLTIELD-----QLQ--PGEVNR--------------------VSSTRKDAGGKGINVARVLK-DLGVEVT   54 (289)
T ss_pred             EEec-ChHHeEEEEcC-----ccc--CCceee--------------------cccccccCCcchhHHHHHHH-HcCCCeE
Confidence            3566 99999999994     553  232211                    23677899999999999999 8999999


Q ss_pred             EEeeecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEEEcCCCCeeeeeCccccCCCCcccCCh------hhhCCcc
Q 026265           99 LIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA------EDVKGSK  172 (241)
Q Consensus        99 ~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~~------~~i~~~~  172 (241)
                      ++|.+|+| +|+++++.|++.||++.++... .+|++++++++.+|+++.+...++  .+++++++.      +.+++++
T Consensus        55 ~is~vG~D-~g~~i~~~l~~~gi~~~~~~~~-~~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  130 (289)
T cd01164          55 ALGFLGGF-TGDFFEALLKEEGIPDDFVEVA-GETRINVKIKEEDGTETEINEPGP--EISEEELEALLEKLKALLKKGD  130 (289)
T ss_pred             EEEEccCc-hhHHHHHHHHHcCCCceEEECC-CCCEEEEEEEeCCCCEEEEeCCCC--CCCHHHHHHHHHHHHHhcCCCC
Confidence            99999998 8999999999999999988765 468888888876677766655443  355444421      3467899


Q ss_pred             EEEEEecc---ccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhh-cCCCccEEecCHHHHHhhhC
Q 026265          173 WLVLRFGM---FNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLL-ESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       173 ~v~~~~~~---~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l-~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      ++|++...   .+.+....+++.+++.++++++|++...        +++.+ +  ++|++++|++|++.++|
T Consensus       131 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~~~~--------~~~~~~~--~~dil~~n~~E~~~l~~  193 (289)
T cd01164         131 IVVLSGSLPPGVPADFYAELVRLAREKGARVILDTSGEA--------LLAALAA--KPFLIKPNREELEELFG  193 (289)
T ss_pred             EEEEeCCCCCCcCHHHHHHHHHHHHHcCCeEEEECChHH--------HHHHHhc--CCcEECCCHHHHHHHhC
Confidence            99998432   1236788889989999999999997531        22333 4  89999999999998874

FruK plays an important role in the predominant pathway for fructose utilisation.This group also contains tagatose-6-phophate kinase, an enzyme of the tagatose 6-phosphate pathway, which responsible for breakdown of the galactose moiety during lactose metabolism by bacteria such as L. lactis.

>PRK09813 fructoselysine 6-kinase; Provisional

Probab=99.87  E-value=2.7e-21  Score=160.69  Aligned_cols=166  Identities=17%  Similarity=0.194  Sum_probs=130.0

Q ss_pred             eEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCCc
Q 026265           17 LILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVP   96 (241)
Q Consensus        17 ~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~~   96 (241)
                      +|+++| .+++|++.+.+                                        +.++||++.|+|++++ +||.+
T Consensus         2 ~v~~iG-~~~~D~~~~~~----------------------------------------~~~~GG~~~NvA~~l~-~lG~~   39 (260)
T PRK09813          2 KLATIG-DNCVDIYPQLG----------------------------------------KAFSGGNAVNVAVYCT-RYGIQ   39 (260)
T ss_pred             eEEEec-cceeeecccCC----------------------------------------ccccCccHHHHHHHHH-HcCCc
Confidence            699999 99999985541                                        2589999999999999 89999


Q ss_pred             eeEEeeecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEEEcCCCCeeeeeCc-cccCCCCcccCChhhhCCccEEE
Q 026265           97 CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCL-SNAVKIQADELIAEDVKGSKWLV  175 (241)
Q Consensus        97 ~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~~~~g~r~~~~~~-g~~~~l~~~~~~~~~i~~~~~v~  175 (241)
                      +.++|.+|+|.+|+++++.|++.||+++++.+.+++|+.+++.++ +|+|++..+. ++...+..++...+.+++++++|
T Consensus        40 ~~~is~vG~D~~g~~i~~~l~~~gI~~~~~~~~~~~t~~~~~~~~-~~~r~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~  118 (260)
T PRK09813         40 PGCITWVGDDDYGTKLKQDLARMGVDISHVHTKHGVTAQTQVELH-DNDRVFGDYTEGVMADFALSEEDYAWLAQYDIVH  118 (260)
T ss_pred             ceEEEEecCcHHHHHHHHHHHHcCCcchheeeecCCCceEEEEEe-CCcEEeeccCCCcccccccCHHHHHHHHhCCEEE
Confidence            999999999999999999999999999999887678999888885 6889887554 44344433333335678999999


Q ss_pred             EEeccccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHH
Q 026265          176 LRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDE  235 (241)
Q Consensus       176 ~~~~~~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~E  235 (241)
                      ++..    ....++++.++++|++++||++...    ..+.+..+++  ++|++++|+++
T Consensus       119 ~~~~----~~~~~~~~~~~~~~~~v~~D~~~~~----~~~~~~~~~~--~~d~~~~~~~~  168 (260)
T PRK09813        119 AAIW----GHAEDAFPQLHAAGKLTAFDFSDKW----DSPLWQTLVP--HLDYAFASAPQ  168 (260)
T ss_pred             Eecc----chHHHHHHHHHHcCCeEEEEcCCCc----cHHHHHHhCC--ceeEEEecCCc
Confidence            9831    1234667778899999999997542    1123455666  99999998553

>PRK11316 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; Provisional

Probab=99.86  E-value=9.1e-21  Score=170.27  Aligned_cols=190  Identities=17%  Similarity=0.193  Sum_probs=135.7

Q ss_pred             CCeEEEecCCeeeEEEeecCHhHHhhCCC-CCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhc
Q 026265           15 AALILGLQPAALIDHVARVDWSLLDQIPG-ERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGF   93 (241)
Q Consensus        15 ~~~v~~iG~~~~vD~~~~~~~~~l~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~L   93 (241)
                      ..+|+++| .+++|+++.++.   ++++. .++..                    +........+|| ++|+|++++ +|
T Consensus        10 ~~~ilviG-~~~lD~~~~~~~---~~~~~~~~~~~--------------------~~~~~~~~~~GG-a~NvA~~la-~L   63 (473)
T PRK11316         10 RAGVLVVG-DVMLDRYWYGPT---SRISPEAPVPV--------------------VKVNQIEERPGG-AANVAMNIA-SL   63 (473)
T ss_pred             CCcEEEEC-ccEEeeeeeccc---ceeCCCCCCCE--------------------EEeeeEEecCcH-HHHHHHHHH-Hc
Confidence            35699999 999999998632   23321 11100                    112367788999 699999999 89


Q ss_pred             CCceeEEeeecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEEEcCCCCeeeeeCccccCCCCcccCC---hhhhCC
Q 026265           94 GVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELI---AEDVKG  170 (241)
Q Consensus        94 G~~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~---~~~i~~  170 (241)
                      |.++.++|.+|+|.+|+++++.|++.||+++++.+.+.+|+.++++++.+++............++.+.+.   .+.+++
T Consensus        64 G~~v~~i~~vG~D~~g~~i~~~L~~~gI~~~~v~~~~~~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~  143 (473)
T PRK11316         64 GAQARLVGLTGIDEAARALSKLLAAVGVKCDFVSVPTHPTITKLRVLSRNQQLIRLDFEEGFEGVDPQPLLERIEQALPS  143 (473)
T ss_pred             CCcEEEEEEEcCCHHHHHHHHHHHHcCCceeEEEcCCCCCCeeEEEEeCCceEEecccccCCCchhHHHHHHHHHHHhcc
Confidence            99999999999999999999999999999988877545799999988744332221111111222333321   245789


Q ss_pred             ccEEEEE-eccccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          171 SKWLVLR-FGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       171 ~~~v~~~-~~~~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      ++++|++ +.....+.+..+++.+++.|+++++|+++..        + ..++  .+|++++|++|++.|+|
T Consensus       144 ~~~v~is~~~~~~~~~~~~~~~~~k~~g~~vv~Dp~~~~--------~-~~~~--~~dil~pN~~Ea~~l~g  204 (473)
T PRK11316        144 IGALVLSDYAKGALASVQAMIQLARKAGVPVLIDPKGTD--------F-ERYR--GATLLTPNLSEFEAVVG  204 (473)
T ss_pred             CCEEEEecCCccchhHHHHHHHHHHhcCCeEEEeCCCCC--------c-cccC--CCeEECcCHHHHHHHhC
Confidence            9999998 4211235678889999999999999997431        1 2234  89999999999998875

>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]

Probab=99.85  E-value=2.7e-20  Score=154.83  Aligned_cols=184  Identities=25%  Similarity=0.306  Sum_probs=149.3

Q ss_pred             eEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCCc
Q 026265           17 LILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVP   96 (241)
Q Consensus        17 ~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~~   96 (241)
                      +|+++-.||.+|+++.+++     +  ..|....                    .......+||+|.|||+.|+ .||.+
T Consensus         1 mI~TvTLNPaiD~~~~l~~-----l--~~g~vNr--------------------~~~~~~~aGGKGINVa~vL~-~lG~~   52 (310)
T COG1105           1 MIYTVTLNPALDYTVFLDE-----L--ELGEVNR--------------------VRAVTKTAGGKGINVARVLK-DLGIP   52 (310)
T ss_pred             CeEEEecChhHhheeeccc-----c--cccceee--------------------eccceecCCCCceeHHHHHH-HcCCC
Confidence            4677778999999999943     3  1222211                    13788999999999999999 89999


Q ss_pred             eeEEeeecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEEEcC-CCCeeeeeCccccCCCCcccCCh------hhhC
Q 026265           97 CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDA-SGNRTMRPCLSNAVKIQADELIA------EDVK  169 (241)
Q Consensus        97 ~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~~~-~g~r~~~~~~g~~~~l~~~~~~~------~~i~  169 (241)
                      +..+|.+|.+ .|+++.+.|++.||...++.+. +.|+.++.+.+. +|+.|-+-.+|  ..++++++..      ..++
T Consensus        53 ~~a~GflGg~-tg~~~~~~l~~~gi~~~fv~v~-g~TRinvki~~~~~~~~Tein~~G--p~is~~~~~~~l~~~~~~l~  128 (310)
T COG1105          53 VTALGFLGGF-TGEFFVALLKDEGIPDAFVEVK-GDTRINVKILDEEDGEETEINFPG--PEISEAELEQFLEQLKALLE  128 (310)
T ss_pred             ceEEEecCCc-cHHHHHHHHHhcCCCceEEEcc-CCCeeeEEEEecCCCcEEEecCCC--CCCCHHHHHHHHHHHHHhcc
Confidence            9999999986 6999999999999999888775 689999999986 45566665566  5777766542      3478


Q ss_pred             CccEEEEEecc---ccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          170 GSKWLVLRFGM---FNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       170 ~~~~v~~~~~~---~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      +.|+|.+++++   ++.+.+.++++.+++.|+++++|.+..        .|.+.|++ .+++++||.+|.+.++|
T Consensus       129 ~~d~VvlsGSlP~g~~~d~y~~li~~~~~~g~~vilD~Sg~--------~L~~~L~~-~P~lIKPN~~EL~~~~g  194 (310)
T COG1105         129 SDDIVVLSGSLPPGVPPDAYAELIRILRQQGAKVILDTSGE--------ALLAALEA-KPWLIKPNREELEALFG  194 (310)
T ss_pred             cCCEEEEeCCCCCCCCHHHHHHHHHHHHhcCCeEEEECChH--------HHHHHHcc-CCcEEecCHHHHHHHhC
Confidence            89999999754   468999999999999999999999865        35555654 69999999999999986

>PLN02630 pfkB-type carbohydrate kinase family protein

Probab=99.85  E-value=5.1e-20  Score=157.77  Aligned_cols=179  Identities=13%  Similarity=0.090  Sum_probs=139.6

Q ss_pred             ecccCCCCeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHH
Q 026265            9 NREASQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRG   88 (241)
Q Consensus         9 ~~~~~~~~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~   88 (241)
                      +.++.+.++|+++| +.++|+++.++.                                     ....++||+++|+|.+
T Consensus         5 ~~~~~~~~~vlvvG-~~~~D~i~~~g~-------------------------------------~~~~~~GG~a~N~A~a   46 (335)
T PLN02630          5 SKRPIPQRRVLIVG-NYCHDVLIQNGS-------------------------------------VTAESLGGAASFISNV   46 (335)
T ss_pred             CCCCCCCCCEEEEe-eeeeeEEEeCCc-------------------------------------EEEEecCcHHHHHHHH
Confidence            34567778999999 999999988721                                     1347899999999999


Q ss_pred             HHhhcCCceeEEeeecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEEEcC-----CCCeeeeeCccccCCCCcccC
Q 026265           89 LSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDA-----SGNRTMRPCLSNAVKIQADEL  163 (241)
Q Consensus        89 la~~LG~~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~~~-----~g~r~~~~~~g~~~~l~~~~~  163 (241)
                      ++ |||.++.++|.+|+|..          .+++...+...+.+|+.+++++++     +|+|.++...+++..++++++
T Consensus        47 la-rLG~~~~lis~VG~D~~----------~~v~~~~~~~~~~~T~~~~~~~~~g~~~~~~e~~i~~~~ga~~~l~~~di  115 (335)
T PLN02630         47 LD-ALSVECELVSKVGPDFL----------YQVSHPPIVIPDSKTTEFHADFDQGIDGNGHEDRVLKRVCACDPIEPSDI  115 (335)
T ss_pred             HH-HcCCceEEEEEecCCcc----------ccccccceecCCCCceEEEEEEcCCcccCCCCeEEEEeccccCCCChHHC
Confidence            99 89999999999999952          367765554433479999998876     568899989999999999988


Q ss_pred             ChhhhCCccEEEEEeccccHHHHHHHHHHHHH-----CCCeEEEeCCch-HHHhhc-hhhHHhhhcCCCccEEecCHHHH
Q 026265          164 IAEDVKGSKWLVLRFGMFNFEVIQAAIRIAKQ-----EGLSVSMDLASF-EMVRNF-RTPLLQLLESGDVDLCFANEDEA  236 (241)
Q Consensus       164 ~~~~i~~~~~v~~~~~~~~~~~~~~~~~~a~~-----~g~~i~~D~~~~-~~~~~~-~~~l~~~l~~~~~d~l~~N~~Ea  236 (241)
                      +...+..++++++... .+++....+++.++.     +|..++||+.+. .....+ ...+.++++  ++|++++|++|+
T Consensus       116 ~~~~~~~~~~~~l~~e-i~~e~~~~~~~~a~~v~~D~~g~~~~~Dp~~~~~~~~~~~~~~~~~~L~--~iDil~~ne~Ea  192 (335)
T PLN02630        116 PDMRYEFGMAVGVAGE-ILPETLERMVEICDVVVVDIQALIRVFDPVDGTVKLVKLEETGFYDMLP--RIGFLKASSEEA  192 (335)
T ss_pred             CHHHhcccceeeecCC-CcHHHHHHHHHHhhhheeccCceEEecCCcccccccchhhHHHHHHHHH--hCCEEEecHHHH
Confidence            7656788888888744 356788888888888     799999999863 100011 122556777  999999999999


Q ss_pred             Hhh
Q 026265          237 AEL  239 (241)
Q Consensus       237 ~~l  239 (241)
                      +.+
T Consensus       193 ~~l  195 (335)
T PLN02630        193 LFI  195 (335)
T ss_pred             hhc
Confidence            865

>cd01937 ribokinase_group_D Ribokinase-like subgroup D

Probab=99.81  E-value=7.6e-19  Score=145.38  Aligned_cols=167  Identities=17%  Similarity=0.106  Sum_probs=120.2

Q ss_pred             eEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCCc
Q 026265           17 LILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVP   96 (241)
Q Consensus        17 ~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~~   96 (241)
                      +|+++| .+++|++...+                                      +....+||+++|+|++++ +||.+
T Consensus         1 ~il~iG-~~~iD~~~~~~--------------------------------------~~~~~~GG~~~Nva~~la-~lG~~   40 (254)
T cd01937           1 KIVIIG-HVTIDEIVTNG--------------------------------------SGVVKPGGPATYASLTLS-RLGLT   40 (254)
T ss_pred             CeEEEc-ceeEEEEecCC--------------------------------------ceEEecCchhhhHHHHHH-HhCCC
Confidence            589999 99999997651                                      346889999999999999 89999


Q ss_pred             eeEEeeecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEEEcCCCCeeeeeCccccCCCCcccCChhhhCCccEEEE
Q 026265           97 CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLVL  176 (241)
Q Consensus        97 ~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~~~~i~~~~~v~~  176 (241)
                      +.++|.+|+|..|+  ++.|++.||++..+  ....|+.+++.++.+|+|+++.+.++.......   ...+.++|++|+
T Consensus        41 ~~~i~~vG~D~~g~--~~~l~~~gv~~~~~--~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~  113 (254)
T cd01937          41 VKLVTKVGRDYPDK--WSDLFDNGIEVISL--LSTETTTFELNYTNEGRTRTLLAKCAAIPDTES---PLSTITAEIVIL  113 (254)
T ss_pred             eEEEEeeCCCchHH--HHHHHHCCcEEEEe--cCCCeEEEEEEecCCCCeeeeeccccCCccccc---ccccCcccEEEE
Confidence            99999999999999  68899999996533  333566666666667888887776654332221   235788999999


Q ss_pred             EeccccHHHHHHHHHHHHHCCCeEEEeCCchHH-HhhchhhHHhhhcCCCccEEecCHHHHHh
Q 026265          177 RFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEM-VRNFRTPLLQLLESGDVDLCFANEDEAAE  238 (241)
Q Consensus       177 ~~~~~~~~~~~~~~~~a~~~g~~i~~D~~~~~~-~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~  238 (241)
                      +.  .+.+....+.+.    ..++++|++.... .......+.++++  ++|++++|++|++.
T Consensus       114 ~~--~~~~~~~~~~~~----~~~v~~D~~~~~~~~~~~~~~~~~~l~--~~di~~~n~~E~~~  168 (254)
T cd01937         114 GP--VPEEISPSLFRK----FAFISLDAQGFLRRANQEKLIKCVILK--LHDVLKLSRVEAEV  168 (254)
T ss_pred             CC--CcchhcHHHHhh----hhheeEccccceeeccccchHHHhhcc--cCcEEEEcHHHHhh
Confidence            83  233444444332    2789999975310 0011111346677  99999999999975

Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time.

>cd01946 ribokinase_group_C Ribokinase-like subgroup C

Probab=99.80  E-value=2.1e-18  Score=144.60  Aligned_cols=157  Identities=22%  Similarity=0.205  Sum_probs=110.7

Q ss_pred             ceeecCChHHHHHHHHHhhcCCceeEEeeecCChhHHHHHHHHHhCCceeeceeecCC-CceeEEEEE--cCCCCeeeee
Q 026265           74 IKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLV--DASGNRTMRP  150 (241)
Q Consensus        74 ~~~~~GG~~~N~a~~la~~LG~~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~-~T~~~~~~~--~~~g~r~~~~  150 (241)
                      ....+||++.|+|.+++ ||| ++.++|.+|+| +|+.+++.|++.||+++++.+.++ +|.......  +.+++++...
T Consensus        20 ~~~~~GG~a~N~a~~la-~lg-~v~~i~~vG~D-~g~~~~~~l~~~gi~~~~v~~~~~~~t~~~~~~~~~~~~~~~~~~~   96 (277)
T cd01946          20 VDKALGGSATYFSLSAS-YFT-DVRLVGVVGED-FPEEDYKLLNSHNIVTLGLLSKEDGKTFHWAGRYHYDLNEADTLDT   96 (277)
T ss_pred             eeeccCchHHHHHHHHH-Hhc-cceeEEeccCc-ChHHHHHHHHhccCcceeEEEecCCCeEEEeeEehhhcccccchhh
Confidence            34679999999999999 898 79999999999 899999999999999999887654 452211110  0123333332


Q ss_pred             CccccCCCCcccCChhhhCCccEEEEEeccccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEe
Q 026265          151 CLSNAVKIQADELIAEDVKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCF  230 (241)
Q Consensus       151 ~~g~~~~l~~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~  230 (241)
                      ..+....+++. + .+.+++++++|++.  .+++...++++.+++. .+++||+...+. ....+.+.++++  ++|+++
T Consensus        97 ~~~~~~~~~~~-~-~~~~~~~~~v~~~~--~~~~~~~~~~~~~~~~-~~v~~D~~~~~~-~~~~~~~~~~l~--~~d~~~  168 (277)
T cd01946          97 DLNVFADFDPQ-L-PEHYKDSEFVFLGN--IAPELQREVLEQVKDP-KLVVMDTMNFWI-SIKPEKLKKVLA--KVDVVI  168 (277)
T ss_pred             hhhHHhhcCCC-C-hHHhhcCCEEEECC--CCHHHHHHHHHHHHhC-CEEEEccHHHhh-hhhHHHHHHHhc--cCCEEe
Confidence            22222223221 2 24578899999984  3567778888888877 889999843210 112345677888  999999


Q ss_pred             cCHHHHHhhhC
Q 026265          231 ANEDEAAELVR  241 (241)
Q Consensus       231 ~N~~Ea~~l~g  241 (241)
                      +|++|++.|+|
T Consensus       169 ~n~~E~~~l~g  179 (277)
T cd01946         169 INDGEARQLTG  179 (277)
T ss_pred             CCHHHHHHHhC
Confidence            99999998875

Found only in bacteria, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time.

>KOG2947 consensus Carbohydrate kinase [Carbohydrate transport and metabolism]

Probab=99.80  E-value=1.6e-18  Score=136.86  Aligned_cols=189  Identities=21%  Similarity=0.326  Sum_probs=148.7

Q ss_pred             CCCeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhc
Q 026265           14 QAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGF   93 (241)
Q Consensus        14 ~~~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~L   93 (241)
                      +...|+|+| .+.+|++..+     +.+|.+.....-                     -+..++-||.+.|+..++. +|
T Consensus         3 ~~k~VLcVG-~~~lD~iTiv-----d~~~fe~~~~r~---------------------~~g~wqRgG~asNvcTvlr-lL   54 (308)
T KOG2947|consen    3 EPKQVLCVG-CTVLDVITIV-----DKYPFEDSEIRC---------------------LSGRWQRGGNASNVCTVLR-LL   54 (308)
T ss_pred             CcceEEEec-cEEEEEEEec-----cCCCCCccceeh---------------------hhhhhhcCCCcchHHHHHH-Hh
Confidence            346799999 9999999999     677755332110                     1567899999999999999 89


Q ss_pred             CCceeEEeeecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEEEc-CCCCeeeeeCccccCCCCcccCChhhhCCcc
Q 026265           94 GVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVD-ASGNRTMRPCLSNAVKIQADELIAEDVKGSK  172 (241)
Q Consensus        94 G~~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~~-~~g~r~~~~~~g~~~~l~~~~~~~~~i~~~~  172 (241)
                      |.++.|+|.+......+.+++.|++.|||+++....+.....+.++++ ..|.||++.+..+.+..+.+++.+-.++++.
T Consensus        55 G~~cef~Gvlsr~~~f~~lLddl~~rgIdishcpftd~~pp~ssiI~~r~s~trTil~~dks~p~vT~~dF~kvdl~qy~  134 (308)
T KOG2947|consen   55 GAPCEFFGVLSRGHVFRFLLDDLRRRGIDISHCPFTDHSPPFSSIIINRNSGTRTILYCDKSLPDVTATDFEKVDLTQYG  134 (308)
T ss_pred             CCchheeeecccchhHHHHHHHHHhcCCCcccCccccCCCCcceEEEecCCCceEEEEecCCCccccHHHhhhcccceee
Confidence            999999999999989999999999999999998877665555555555 4789999988888889999998877899999


Q ss_pred             EEEEEeccccHHH---HHHHHHHHH----HCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhh
Q 026265          173 WLVLRFGMFNFEV---IQAAIRIAK----QEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAEL  239 (241)
Q Consensus       173 ~v~~~~~~~~~~~---~~~~~~~a~----~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l  239 (241)
                      |+|+..-- +++.   ++.+.+.-.    +.++.+++|+-      +.++.+.++..  ++||+|.+.+-|+.+
T Consensus       135 WihfE~Rn-p~etlkM~~~I~~~N~r~pe~qrI~vSvd~e------n~req~~~l~a--m~DyVf~sK~~a~~~  199 (308)
T KOG2947|consen  135 WIHFEARN-PSETLKMLQRIDAHNTRQPEEQRIRVSVDVE------NPREQLFQLFA--MCDYVFVSKDVAKHL  199 (308)
T ss_pred             eEEEecCC-hHHHHHHHHHHHHhhcCCCccceEEEEEEec------CcHHHHHHHhh--cccEEEEEHHHHhhh
Confidence            99999421 3333   233322211    24678899985      56778888888  999999998877765

>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]

Probab=99.71  E-value=4.5e-16  Score=131.48  Aligned_cols=191  Identities=20%  Similarity=0.261  Sum_probs=138.7

Q ss_pred             CCCeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhc
Q 026265           14 QAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGF   93 (241)
Q Consensus        14 ~~~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~L   93 (241)
                      ...+|+++| ..++|.+++..-   +++.          +|..         -|.++......++|| ++|||.+++ .|
T Consensus         9 ~~~kVLVvG-DvmLDrY~~G~~---~RIS----------PEAP---------VPVv~v~~e~~rlGG-AaNVa~Nia-sL   63 (467)
T COG2870           9 KQAKVLVVG-DVMLDRYWYGKV---SRIS----------PEAP---------VPVVKVEKEEERLGG-AANVAKNIA-SL   63 (467)
T ss_pred             cCCcEEEEc-ceeeeeeccccc---cccC----------CCCC---------CceEEeccccccccc-HHHHHHHHH-Hc
Confidence            356899999 999999998742   2332          1111         122345677889988 999999999 79


Q ss_pred             CCceeEEeeecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEEEcCCCCeeeeeCccccCCCC-cccC-C--hhhhC
Q 026265           94 GVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQ-ADEL-I--AEDVK  169 (241)
Q Consensus        94 G~~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~~~~g~r~~~~~~g~~~~l~-~~~~-~--~~~i~  169 (241)
                      |.++.++|.+|.|..|+.+.+.|.+.+|+...+.....+|.....++. ..++-+........... .+.+ +  .+.+.
T Consensus        64 Ga~a~l~GvvG~Deag~~L~~~l~~~~i~~~l~~~~~r~T~~K~Rv~s-~nQQllRvD~Ee~~~~~~~~~ll~~~~~~l~  142 (467)
T COG2870          64 GANAYLVGVVGKDEAGKALIELLKANGIDSDLLRDKNRPTIVKLRVLS-RNQQLLRLDFEEKFPIEDENKLLEKIKNALK  142 (467)
T ss_pred             CCCEEEEEeeccchhHHHHHHHHHhcCcccceEeecCCCceeeeeeec-ccceEEEecccccCcchhHHHHHHHHHHHhh
Confidence            999999999999999999999999999997666666568988888885 33344433322111111 1111 1  35689


Q ss_pred             CccEEEEE-eccccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          170 GSKWLVLR-FGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       170 ~~~~v~~~-~~~~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      +.+++.++ |.---...+..+++.|++.|+++.+||-+.        ++..   |+.+..++||..|+++..|
T Consensus       143 ~~~~vVLSDY~KG~L~~~q~~I~~ar~~~~pVLvDPKg~--------Df~~---Y~GAtLiTPN~~E~~~~vg  204 (467)
T COG2870         143 SFDALVLSDYAKGVLTNVQKMIDLAREAGIPVLVDPKGK--------DFEK---YRGATLITPNLKEFEEAVG  204 (467)
T ss_pred             cCCEEEEeccccccchhHHHHHHHHHHcCCcEEECCCCc--------chhh---hCCCeecCCCHHHHHHHHc
Confidence            99999999 753222337889999999999999999754        2333   2389999999999998765

>cd00287 ribokinase_pfkB_like ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including carbohydrates and aromatic small molecules, all are phosphorylated at a hydroxyl group

Probab=99.65  E-value=3.4e-15  Score=118.46  Aligned_cols=124  Identities=28%  Similarity=0.354  Sum_probs=97.4

Q ss_pred             eEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCCc
Q 026265           17 LILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVP   96 (241)
Q Consensus        17 ~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~~   96 (241)
                      +|+++| ++++|+++.+     +++|.+.+...                     .......+||++.|+|.+++ +||.+
T Consensus         1 ~v~~iG-~~~~D~~~~~-----~~~~~~~~~~~---------------------~~~~~~~~GG~~~n~a~~l~-~LG~~   52 (196)
T cd00287           1 RVLVVG-SLLVDVILRV-----DALPLPGGLVR---------------------PGDTEERAGGGAANVAVALA-RLGVS   52 (196)
T ss_pred             CEEEEc-cceEEEEEEe-----ccCCCCCCeEE---------------------eceeeecCCCcHHHHHHHHH-HCCCc
Confidence            489999 9999999999     45654322211                     23678999999999999999 89999


Q ss_pred             eeEEeeecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEEEcCCCCeeeeeCccccCCCCcccCChhhhCCccEEEE
Q 026265           97 CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLVL  176 (241)
Q Consensus        97 ~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~~~~i~~~~~v~~  176 (241)
                      +.++|                                                                     +|++|+
T Consensus        53 ~~~~~---------------------------------------------------------------------~~~v~i   63 (196)
T cd00287          53 VTLVG---------------------------------------------------------------------ADAVVI   63 (196)
T ss_pred             EEEEE---------------------------------------------------------------------ccEEEE
Confidence            99999                                                                     899999


Q ss_pred             EeccccH-HHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          177 RFGMFNF-EVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       177 ~~~~~~~-~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      ++.. +. +.+.++++.+++.|+++++|++...... ....+.++++  ++|++++|++|++.|+|
T Consensus        64 ~~~~-~~~~~~~~~~~~~~~~~~~v~~D~~~~~~~~-~~~~~~~~~~--~~dvl~~n~~E~~~l~~  125 (196)
T cd00287          64 SGLS-PAPEAVLDALEEARRRGVPVVLDPGPRAVRL-DGEELEKLLP--GVDILTPNEEEAEALTG  125 (196)
T ss_pred             eccc-CcHHHHHHHHHHHHHcCCeEEEeCCcccccc-ccchHHHHHh--hCCEECCCHHHHHHHhC
Confidence            9542 33 6788899999999999999998653211 1122556677  99999999999998865

The superfamily includes ribokinase, fructokinase, ketohexokinase, 2-dehydro-3-deoxygluconokinase, 1-phosphofructokinase, the minor 6-phosphofructokinase (PfkB), inosine-guanosine kinase, and adenosine kinase. Even though there is a high degree of structural conservation within this superfamily, their multimerization level varies widely, monomeric (e.g. adenosine kinase), dimeric (e.g. ribokinase), and trimeric (e.g THZ kinase).

>KOG3009 consensus Predicted carbohydrate kinase, contains PfkB domain [General function prediction only]

Probab=99.11  E-value=5.3e-10  Score=96.26  Aligned_cols=160  Identities=23%  Similarity=0.302  Sum_probs=112.4

Q ss_pred             CcccceeecccCCCCeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCCh
Q 026265            2 GAEHLIINREASQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGS   81 (241)
Q Consensus         2 ~~~~~~~~~~~~~~~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~   81 (241)
                      +++.++.|+.++-..+=+++| ..++|..++++++.     ..+|++.                     +....+..||.
T Consensus       327 ~k~k~~s~~~~~~~~KPv~vG-a~i~D~~~k~d~d~-----K~dG~sy---------------------~~~~~Qa~GGV  379 (614)
T KOG3009|consen  327 LKNKSQSQPTASTTRKPVSVG-ATIVDFEAKTDEDV-----KDDGGSY---------------------NGQVVQAMGGV  379 (614)
T ss_pred             cccccCCCCccccccCceeec-ceEEEeEEeecccc-----cccCCcc---------------------cchhhhhccch
Confidence            456677777777777779999 99999999997532     1233322                     23677899999


Q ss_pred             HHHHHHHHHhhcCCceeEEeeecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEEEcCCCCeeeeeCccccCCCCcc
Q 026265           82 VTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQAD  161 (241)
Q Consensus        82 ~~N~a~~la~~LG~~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~  161 (241)
                      +.|.|.+++ +||.++.++++||+|.                                   +++  |.  .....++  -
T Consensus       380 arN~A~a~~-~lg~d~~liSavG~d~-----------------------------------n~~--~~--~~~~~~~--~  417 (614)
T KOG3009|consen  380 ARNHADALA-RLGCDSVLISAVGDDN-----------------------------------NGH--FF--RQNSHKI--V  417 (614)
T ss_pred             hhhHHHHHH-HhcCCeeEEEEeccCC-----------------------------------cch--hh--hhhhhhh--h
Confidence            999999999 9999999999999992                                   111  10  0000111  1


Q ss_pred             cCChhhhCCccEEEEEeccccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHH
Q 026265          162 ELIAEDVKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAA  237 (241)
Q Consensus       162 ~~~~~~i~~~~~v~~~~~~~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~  237 (241)
                      +...+.+ ++++++++.++ ++..+..+++ ++++..+++|.|.+.++.   .+-|.-++. ..++.+.||..|+.
T Consensus       418 e~~~dl~-~a~~I~~DsNi-S~~~Ma~il~-ak~~k~~V~fEPTd~~k~---~K~fk~l~v-~~i~~i~PN~~Ell  486 (614)
T KOG3009|consen  418 ESNEDLL-SADFILLDSNI-SVPVMARILE-AKKHKKQVWFEPTDIDKV---KKVFKTLLV-GAITAISPNANELL  486 (614)
T ss_pred             hhhhhhh-cCCEEEEcCCC-CHHHHHHHHH-hhhccCceEecCCCchhh---hhhhhhcce-eeEEeeCCCHHHHH
Confidence            1222334 79999999664 7778888887 999999999999876532   222333332 36899999999974

>PRK14039 ADP-dependent glucokinase; Provisional

Probab=97.22  E-value=0.035  Score=49.44  Aligned_cols=158  Identities=18%  Similarity=0.119  Sum_probs=85.2

Q ss_pred             CceeecCChHHHHHHHHHhhcCCceeE-EeeecCChhHHHHHHHHHhCCceee-------------------------ce
Q 026265           73 PIKTIAGGSVTNTIRGLSVGFGVPCGL-IGAYGDDQQGQLFVSNMQFSGVDVS-------------------------RL  126 (241)
Q Consensus        73 ~~~~~~GG~~~N~a~~la~~LG~~~~~-vg~vG~D~~g~~i~~~l~~~gvd~~-------------------------~~  126 (241)
                      ....+.||.+.-+|..++ ++|..+.+ .++.-    ++..++.|...+|-.-                         ++
T Consensus        85 ~~~~rmGGnAgimAn~la-~lg~~~Vi~~~~~l----sk~q~~lf~~~~i~~p~~~~~~~l~~~~~~~a~~~~~d~IH~I  159 (453)
T PRK14039         85 NSEIRMGGNAGIMANVLS-ELGASRVVPNVAVP----SKTQLSLFSKKAVYFPGMPLQASETDGEKVGASSSDQEPIHFV  159 (453)
T ss_pred             CceEEeCChHHHHHHHHH-hcCCceEEEcCCCC----CHHHHHhcCCCCEEeccccccccccCccccccccCCCCCceEE
Confidence            567999999999999999 89998644 33221    3445555533333222                         11


Q ss_pred             eecCCCceeEE-----EEEcCCCCeeeeeCccccCCCCc-ccCC---hhhhCCccEEEEE-ecccc---------HHHH-
Q 026265          127 RMKRGPTGQCV-----CLVDASGNRTMRPCLSNAVKIQA-DELI---AEDVKGSKWLVLR-FGMFN---------FEVI-  186 (241)
Q Consensus       127 ~~~~~~T~~~~-----~~~~~~g~r~~~~~~g~~~~l~~-~~~~---~~~i~~~~~v~~~-~~~~~---------~~~~-  186 (241)
                      ...  +.|..+     -++-|.-+|-++.+...+..+.. +++.   .+...++|.+.++ +.++.         .+.+ 
T Consensus       160 fEy--~~G~~~~l~~~~~~aPRaNRfI~s~D~~N~~l~i~e~f~~~l~e~~~~~D~avlSG~q~l~d~y~dg~~~~e~l~  237 (453)
T PRK14039        160 FDF--REGETFSLYGTRIRAPRENRFIATFDHLNFRLFINPAFEQYALEHAGEMDGALISGFHLLLETYPDGSTYREKLE  237 (453)
T ss_pred             EEe--CCCCEEecCCccEecCCCCeEEEecCCCCccceecHHHHHHHHhhccCCCEEEEechhhhhhhcCCcccHHHHHH
Confidence            111  122222     12223334444444333333321 2221   1233479999999 44321         1222 


Q ss_pred             --HHHHHHH--HHCCCeEEEeCCchHHHhhchhhHH-hhhcCCCccEEecCHHHHHhhh
Q 026265          187 --QAAIRIA--KQEGLSVSMDLASFEMVRNFRTPLL-QLLESGDVDLCFANEDEAAELV  240 (241)
Q Consensus       187 --~~~~~~a--~~~g~~i~~D~~~~~~~~~~~~~l~-~~l~~~~~d~l~~N~~Ea~~l~  240 (241)
                        .+.++..  +..++++-|...+..- ..++..+. .+++  ++|-+=+|++|...+.
T Consensus       238 ~~~~~i~~l~~~~~~i~iH~E~As~~~-~~i~~~v~~~Ilp--~VDSlGmNEqELa~l~  293 (453)
T PRK14039        238 DSLAQLKWWKSKNEKLRIHAELGHFAS-KEIANSVFLILAG--IVDSIGMNEDELAMLA  293 (453)
T ss_pred             HHHHHHHHHHhcCCCceEEEEecCccc-HHHHHHHHHHhhc--ccccccCCHHHHHHHH
Confidence              2333333  2245789998865421 13444444 5666  9999999999988764

>TIGR00196 yjeF_cterm yjeF C-terminal region, hydroxyethylthiazole kinase-related

Probab=97.20  E-value=0.0018  Score=54.17  Aligned_cols=69  Identities=12%  Similarity=-0.002  Sum_probs=49.6

Q ss_pred             hhCCccEEEEEeccccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          167 DVKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       167 ~i~~~~~v~~~~~~~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      .+..+|++.+++.+.+...+.++++.+++.+.++++|++...    +..... ... ..+++++||..|++.|+|
T Consensus        89 ~~~~~davvig~Gl~~~~~~~~l~~~~~~~~~pvVlDa~g~~----l~~~~~-~~~-~~~~vItPN~~El~~L~g  157 (272)
T TIGR00196        89 LLERYDVVVIGPGLGQDPSFKKAVEEVLELDKPVVLDADALN----LLTYDK-PKR-EGEVILTPHPGEFKRLLG  157 (272)
T ss_pred             hhccCCEEEEcCCCCCCHHHHHHHHHHHhcCCCEEEEhHHHH----HHhhcc-ccc-CCCEEECCCHHHHHHHhC
Confidence            457889999996443444477888888889999999997542    222221 112 268999999999999976

The present model may hit hydroxyethylthiazole kinase, an enzyme associated with thiamine biosynthesis.

>cd01171 YXKO-related B

Probab=96.92  E-value=0.0032  Score=52.04  Aligned_cols=71  Identities=13%  Similarity=0.059  Sum_probs=50.2

Q ss_pred             hhCCccEEEEEeccccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          167 DVKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       167 ~i~~~~~v~~~~~~~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      .+.+.|+++++..+...+.+..+++.+++.+.++++|+.+....... ... .+.+  .+++++||..|++.|+|
T Consensus        74 ~~~~~d~v~ig~gl~~~~~~~~i~~~~~~~~~pvVlDa~~~~~~~~~-~~~-~~~~--~~~iltPn~~E~~~L~g  144 (254)
T cd01171          74 LLERADAVVIGPGLGRDEEAAEILEKALAKDKPLVLDADALNLLADE-PSL-IKRY--GPVVLTPHPGEFARLLG  144 (254)
T ss_pred             hhccCCEEEEecCCCCCHHHHHHHHHHHhcCCCEEEEcHHHHHhhcC-hhh-hccC--CCEEECCCHHHHHHHhC
Confidence            45678999999544233678888888888899999999755311111 011 1233  78999999999999975

subtilis YXKO protein of unknown function and related proteins. Based on the conservation of the ATP binding site, the substrate binding site and the Mg2+binding site and structural homology this group is a member of the ribokinase-like superfamily.

>PRK07105 pyridoxamine kinase; Validated

Probab=96.83  E-value=0.0026  Score=53.56  Aligned_cols=69  Identities=16%  Similarity=0.125  Sum_probs=46.6

Q ss_pred             CccEEEEEeccccHH---HHHHHHHHHHHCCCeEEEeCCchHH-------HhhchhhHHhhhcCCCccEEecCHHHHHhh
Q 026265          170 GSKWLVLRFGMFNFE---VIQAAIRIAKQEGLSVSMDLASFEM-------VRNFRTPLLQLLESGDVDLCFANEDEAAEL  239 (241)
Q Consensus       170 ~~~~v~~~~~~~~~~---~~~~~~~~a~~~g~~i~~D~~~~~~-------~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l  239 (241)
                      +.|.+++++.. +.+   .+.++++.+++.++++++||.....       .+...+.+.++++  ++|+++||+.|++.|
T Consensus        75 ~~~aik~G~l~-~~~~~~~v~~~~~~~~~~~~~vv~DPv~~~~~~l~~~~~~~~~~~~~~ll~--~advitpN~~Ea~~L  151 (284)
T PRK07105         75 KFDAIYSGYLG-SPRQIQIVSDFIKYFKKKDLLVVVDPVMGDNGKLYQGFDQEMVEEMRKLIQ--KADVITPNLTEACLL  151 (284)
T ss_pred             ccCEEEECcCC-CHHHHHHHHHHHHHhccCCCeEEECCccccCCcCCCCCCHHHHHHHHHHHh--hCCEecCCHHHHHHH
Confidence            68889988532 444   3444455556668899999963210       0112344567777  999999999999998


Q ss_pred             hC
Q 026265          240 VR  241 (241)
Q Consensus       240 ~g  241 (241)
                      +|
T Consensus       152 ~g  153 (284)
T PRK07105        152 LD  153 (284)
T ss_pred             cC
Confidence            75

>cd01170 THZ_kinase 4-methyl-5-beta-hydroxyethylthiazole (Thz) kinase catalyzes the phosphorylation of the hydroxylgroup of Thz

Probab=96.81  E-value=0.0032  Score=51.81  Aligned_cols=77  Identities=25%  Similarity=0.213  Sum_probs=49.6

Q ss_pred             hhhhCCccEEEEEecccc---HHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          165 AEDVKGSKWLVLRFGMFN---FEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       165 ~~~i~~~~~v~~~~~~~~---~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      .+.++++|++++...+..   .+.+..+++.+++.++++++|+..........+.+.+++....+|+++||..|+..|+|
T Consensus        44 ~~~l~~~d~vvi~~G~l~~~~~~~i~~~~~~~~~~~~pvVlDp~~~~~~~~~~~~~~~ll~~~~~~ilTPN~~Ea~~L~g  123 (242)
T cd01170          44 EELAKIAGALVINIGTLTSEQIEAMLKAGKAANQLGKPVVLDPVGVGATSFRTEVAKELLAEGQPTVIRGNASEIAALAG  123 (242)
T ss_pred             HHHHHHcCcEEEeCCCCChHHHHHHHHHHHHHHhcCCCEEEcccccCcchhHHHHHHHHHhcCCCeEEcCCHHHHHHHhC
Confidence            356788999999933223   24455566668888999999996321000111223344540148999999999999975

A reaction that allows cells to recycle Thz into the thiamine biosynthesis pathway, as an alternative to its synthesis from cysteine, tyrosine and 1-deoxy-D-xylulose-5-phosphate.

>cd01173 pyridoxal_pyridoxamine_kinase Pyridoxal kinase plays a key role in the synthesis of the active coenzyme pyridoxal-5'-phosphate (PLP), by catalyzing the phosphorylation of the precursor vitamin B6 in the presence of Zn2+ and ATP

Probab=96.81  E-value=0.0027  Score=52.45  Aligned_cols=72  Identities=14%  Similarity=0.036  Sum_probs=48.4

Q ss_pred             CCccEEEEEecc--ccHHHHHHHHHHHHHC--CCeEEEeCCchH------HHhhchhhHHhhhcCCCccEEecCHHHHHh
Q 026265          169 KGSKWLVLRFGM--FNFEVIQAAIRIAKQE--GLSVSMDLASFE------MVRNFRTPLLQLLESGDVDLCFANEDEAAE  238 (241)
Q Consensus       169 ~~~~~v~~~~~~--~~~~~~~~~~~~a~~~--g~~i~~D~~~~~------~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~  238 (241)
                      ...+++.+.+..  ...+.+.++++.+++.  ++++++||.-..      ..+...+.+.+++. +++|+++||..|++.
T Consensus        71 ~~~~~v~~G~l~~~~~~~~~~~~l~~~~~~~~~~~vv~Dpv~~~~~~~~~~~~~~~~~~~~~l~-~~~dvi~pN~~Ea~~  149 (254)
T cd01173          71 LEYDAVLTGYLGSAEQVEAVAEIVKRLKEKNPNLLYVCDPVMGDNGKLYVVAEEIVPVYRDLLV-PLADIITPNQFELEL  149 (254)
T ss_pred             ccCCEEEEecCCCHHHHHHHHHHHHHHHHhCCCceEEECCCCCcCCcceecChhHHHHHHHHHH-hcCCEECCcHHHHHH
Confidence            567888666421  1356788888888877  899999994210      00122334445444 389999999999999


Q ss_pred             hhC
Q 026265          239 LVR  241 (241)
Q Consensus       239 l~g  241 (241)
                      |+|
T Consensus       150 l~g  152 (254)
T cd01173         150 LTG  152 (254)
T ss_pred             HcC
Confidence            875

Mammals are unable to synthesize PLP de novo and require its precursors in the form of vitamin B6 (pyridoxal, pyridoxine, and pyridoxamine) from their diet. Pyridoxal kinase encoding genes are also found in many other species including yeast and bacteria.

>PRK12412 pyridoxal kinase; Reviewed

Probab=96.75  E-value=0.0037  Score=52.20  Aligned_cols=69  Identities=17%  Similarity=0.055  Sum_probs=48.7

Q ss_pred             CccEEEEEeccccHHHHHHHHHHHHHCCCe-EEEeCCchHH------HhhchhhHH-hhhcCCCccEEecCHHHHHhhhC
Q 026265          170 GSKWLVLRFGMFNFEVIQAAIRIAKQEGLS-VSMDLASFEM------VRNFRTPLL-QLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       170 ~~~~v~~~~~~~~~~~~~~~~~~a~~~g~~-i~~D~~~~~~------~~~~~~~l~-~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      +.+++.+.+. .+.+.+..+.+.+++.+.+ +++||.....      .+...+.+. .+++  ++|+++||+.|++.|+|
T Consensus        72 ~~~~ikiG~l-~~~~~v~~i~~~~~~~~~~~vv~DPv~~~~~g~~~~~~~~~~~~~~~ll~--~advitpN~~Ea~~L~g  148 (268)
T PRK12412         72 GVDALKTGML-GSVEIIEMVAETIEKHNFKNVVVDPVMVCKGADEALHPETNDCLRDVLVP--KALVVTPNLFEAYQLSG  148 (268)
T ss_pred             CCCEEEECCC-CCHHHHHHHHHHHHhcCCCCEEECcCeeeCCCCcCCChHHHHHHHHhhhc--cceEEcCCHHHHHHHhC
Confidence            3788998853 3678888888888888876 9999963210      001112233 3566  99999999999999975

>PRK08176 pdxK pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinase; Reviewed

Probab=96.73  E-value=0.0055  Score=51.57  Aligned_cols=71  Identities=10%  Similarity=0.015  Sum_probs=45.6

Q ss_pred             hCCccEEEEEeccccHH---HHHHHHHHHHH--CCCeEEEeCCchH------HHhhchhhHH-hhhcCCCccEEecCHHH
Q 026265          168 VKGSKWLVLRFGMFNFE---VIQAAIRIAKQ--EGLSVSMDLASFE------MVRNFRTPLL-QLLESGDVDLCFANEDE  235 (241)
Q Consensus       168 i~~~~~v~~~~~~~~~~---~~~~~~~~a~~--~g~~i~~D~~~~~------~~~~~~~~l~-~~l~~~~~d~l~~N~~E  235 (241)
                      +.+.|.++++|.. +.+   .+.++++..+.  .+.++++||.-..      ..+...+.+. .+++  ++|+++||..|
T Consensus        86 l~~~d~i~~G~l~-s~~~~~~i~~~l~~~~~~~~~~~vv~DPvm~d~~~~~~~~~~~~~~~~~~Ll~--~advitPN~~E  162 (281)
T PRK08176         86 LRQLRAVTTGYMG-SASQIKILAEWLTALRADHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQHLLP--LAQGLTPNIFE  162 (281)
T ss_pred             cccCCEEEECCCC-CHHHHHHHHHHHHHHHHHCCCCcEEeCCccccCCCCeEECccHHHHHHHHhHh--hcCEeCCCHHH
Confidence            4578999998532 333   44555544433  4788999996211      0011223343 3667  99999999999


Q ss_pred             HHhhhC
Q 026265          236 AAELVR  241 (241)
Q Consensus       236 a~~l~g  241 (241)
                      ++.|+|
T Consensus       163 a~~L~g  168 (281)
T PRK08176        163 LEILTG  168 (281)
T ss_pred             HHHHhC
Confidence            999976

>cd01169 HMPP_kinase 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate kinase (HMPP-kinase) catalyzes two consecutive phosphorylation steps in the thiamine phosphate biosynthesis pathway, leading to the synthesis of vitamin B1

Probab=96.64  E-value=0.0082  Score=49.08  Aligned_cols=69  Identities=20%  Similarity=0.088  Sum_probs=47.9

Q ss_pred             CccEEEEEeccccHHHHHHHHHHHHHC-CCeEEEeCCchHHH------hhchhhHH-hhhcCCCccEEecCHHHHHhhhC
Q 026265          170 GSKWLVLRFGMFNFEVIQAAIRIAKQE-GLSVSMDLASFEMV------RNFRTPLL-QLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       170 ~~~~v~~~~~~~~~~~~~~~~~~a~~~-g~~i~~D~~~~~~~------~~~~~~l~-~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      +.+.+.+.+. .+.+.+..+.+.+++. +.++++||......      +...+.+. .+++  ++|+++||..|++.|+|
T Consensus        68 ~~~~i~~G~l-~~~~~~~~i~~~~~~~~~~~vv~Dpv~~~~~~~~~~~~~~~~~~~~~ll~--~~dvitpN~~Ea~~L~g  144 (242)
T cd01169          68 PVDAIKIGML-GSAEIIEAVAEALKDYPDIPVVLDPVMVAKSGDSLLDDDAIEALRELLLP--LATLITPNLPEAELLTG  144 (242)
T ss_pred             CCCEEEECCC-CCHHHHHHHHHHHHhCCCCcEEECCceeCCCCCcccCHHHHHHHHHHhhc--cCeEEeCCHHHHHHHhC
Confidence            5788888753 2577777888888776 88999998643100      01112232 3446  89999999999999976

The first step is the phosphorylation of the hydroxyl group of HMP to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate (HMP-P) and then the phophorylation of HMP-P to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine pyrophosphate (HMP-PP), which is the substrate for the thiamine synthase coupling reaction.

>TIGR00687 pyridox_kin pyridoxal kinase

Probab=96.59  E-value=0.004  Score=52.45  Aligned_cols=72  Identities=11%  Similarity=0.036  Sum_probs=47.4

Q ss_pred             hCCccEEEEEecc--ccHHHHHHHHHHHHHCC--CeEEEeCCchH------HHhhchhhHH-hhhcCCCccEEecCHHHH
Q 026265          168 VKGSKWLVLRFGM--FNFEVIQAAIRIAKQEG--LSVSMDLASFE------MVRNFRTPLL-QLLESGDVDLCFANEDEA  236 (241)
Q Consensus       168 i~~~~~v~~~~~~--~~~~~~~~~~~~a~~~g--~~i~~D~~~~~------~~~~~~~~l~-~~l~~~~~d~l~~N~~Ea  236 (241)
                      +.++|++++.+..  ...+.+.++++.+++.+  ..+++||.-..      ..+.+.+.+. .+++  ++|+++||..|+
T Consensus        72 ~~~~d~v~~G~l~~~~~~~~~~~~l~~~~~~~~~~~vv~Dpv~~d~~~~~~~~~~~~~~~~~~ll~--~adii~pN~~Ea  149 (286)
T TIGR00687        72 LNQCDAVLSGYLGSAEQVAMVVGIVRQVKQANPQALYVCDPVMGDPEKGCYVAPDLLEVYREKAIP--VADIITPNQFEL  149 (286)
T ss_pred             cccCCEEEECCCCCHHHHHHHHHHHHHHHHhCCCCcEEECCeeeeCCCCeeeChhHHHHHHHhccc--cccEecCCHHHH
Confidence            4588998666532  12457788888888765  66888993110      0012333343 3556  899999999999


Q ss_pred             HhhhC
Q 026265          237 AELVR  241 (241)
Q Consensus       237 ~~l~g  241 (241)
                      +.|+|
T Consensus       150 ~~L~g  154 (286)
T TIGR00687       150 ELLTG  154 (286)
T ss_pred             HHHhC
Confidence            99875

ThiD and related proteins form an outgroup.

>TIGR00097 HMP-P_kinase phosphomethylpyrimidine kinase

Probab=96.50  E-value=0.0084  Score=49.58  Aligned_cols=69  Identities=17%  Similarity=0.095  Sum_probs=47.6

Q ss_pred             CccEEEEEeccccHHHHHHHHHHHHHCCC-eEEEeCCchHH-----H-hhchhhHH-hhhcCCCccEEecCHHHHHhhhC
Q 026265          170 GSKWLVLRFGMFNFEVIQAAIRIAKQEGL-SVSMDLASFEM-----V-RNFRTPLL-QLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       170 ~~~~v~~~~~~~~~~~~~~~~~~a~~~g~-~i~~D~~~~~~-----~-~~~~~~l~-~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      +.+.+.+.+. .+.+.+..+.+.+++.+. ++++||.....     . ....+.+. .+++  ++|+++||..|++.|+|
T Consensus        67 ~~~aikiG~l-~~~~~~~~i~~~~~~~~~~~vVlDPv~~~~~g~~l~~~~~~~~~~~~ll~--~~dvitpN~~Ea~~L~g  143 (254)
T TIGR00097        67 PVDAAKTGML-ASAEIVEAVARKLREYPVRPLVVDPVMVAKSGAPLLEEEAIEALRKRLLP--LATLITPNLPEAEALLG  143 (254)
T ss_pred             CCCEEEECCc-CCHHHHHHHHHHHHhcCCCcEEECCccccCCCCcCCCHHHHHHHHHhccc--cccEecCCHHHHHHHhC
Confidence            4677777743 367888888888888888 69999853210     0 00111232 4566  89999999999999875

This model represents phosphomethylpyrimidine kinase, the ThiD protein of thiamine biosynthesis. The protein is commonly observed within operons containing other thiamine biosynthesis genes. Numerous examples are fusion proteins with other thiamine-biosynthetic domains. Saccaromyces has three recent paralogs, two of which are isofunctional and score above the trusted cutoff. The third shows a longer branch length in a phylogenetic tree and scores below the trusted cutoff, as do putative second copies in a number of species.

>PRK06427 bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed

Probab=96.47  E-value=0.01  Score=49.37  Aligned_cols=69  Identities=19%  Similarity=0.120  Sum_probs=48.1

Q ss_pred             CccEEEEEeccccHHHHHHHHHHHHHCCC-eEEEeCCchHHH------hhchhhHH-hhhcCCCccEEecCHHHHHhhhC
Q 026265          170 GSKWLVLRFGMFNFEVIQAAIRIAKQEGL-SVSMDLASFEMV------RNFRTPLL-QLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       170 ~~~~v~~~~~~~~~~~~~~~~~~a~~~g~-~i~~D~~~~~~~------~~~~~~l~-~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      +.+.+.+.+. .+.+.+..+.+.+++.+. ++++||......      ....+.+. ++++  ++|+++||..|++.|+|
T Consensus        73 ~~~ai~iG~l-~~~~~~~~i~~~~~~~~~~~vv~DPv~~~~~~~~~~~~~~~~~~~~~ll~--~~dvitpN~~Ea~~L~g  149 (266)
T PRK06427         73 RIDAVKIGML-ASAEIIETVAEALKRYPIPPVVLDPVMIAKSGDPLLADDAVAALRERLLP--LATLITPNLPEAEALTG  149 (266)
T ss_pred             CCCEEEECCc-CCHHHHHHHHHHHHhCCCCCEEEcCccccCCCCcCCCHHHHHHHHHhhhC--cCeEEcCCHHHHHHHhC
Confidence            5788888863 367777788888888775 799998522100      01112333 3666  89999999999999975

>PF08543 Phos_pyr_kin: Phosphomethylpyrimidine kinase; InterPro: IPR013749 This enzyme 2

Probab=96.35  E-value=0.012  Score=48.42  Aligned_cols=69  Identities=16%  Similarity=0.099  Sum_probs=43.2

Q ss_pred             CccEEEEEeccccHHHHHHHHHHHHHCCCeEEEeCCchH------HHhhchhhHHh-hhcCCCccEEecCHHHHHhhhC
Q 026265          170 GSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFE------MVRNFRTPLLQ-LLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       170 ~~~~v~~~~~~~~~~~~~~~~~~a~~~g~~i~~D~~~~~------~~~~~~~~l~~-~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      +.+.+.+.|. .+.+.+..+.+..++.+.++++||--..      ..+...+.+.+ +++  .+|+++||..|++.|+|
T Consensus        60 ~~~aikiG~l-~~~~~v~~i~~~l~~~~~~vV~DPVm~~~~g~~~~~~~~~~~~~~~Llp--~AdiitPN~~Ea~~L~g  135 (246)
T PF08543_consen   60 KFDAIKIGYL-GSAEQVEIIADFLKKPKIPVVLDPVMGDSGGYYYVDPDVVEAMREELLP--LADIITPNLTEAELLTG  135 (246)
T ss_dssp             C-SEEEE-S--SSHHHHHHHHHHHHHTTTEEEEE---EETTTECTSSHHHHHHHHHHCGG--G-SEEE-BHHHHHHHHT
T ss_pred             cccEEEEccc-CCchhhhhHHHHHhccCCCEEEecccccCCCCcCCCHHHHHHHHhccCC--cCeEEeCCHHHHHHHhC
Confidence            6888999963 3566666666667777889999983210      01123344444 777  99999999999999986

7.4.7 from EC is part of the Thiamine pyrophosphate (TPP) synthesis pathway, TPP is an essential cofactor for many enzymes []. ; PDB: 2DDW_B 2DDO_B 2DDM_A 3IBQ_A 3H74_A 3HYO_A 1UB0_A 1VI9_D 1TD2_B 2PHP_D ....

>TIGR00694 thiM hydroxyethylthiazole kinase

Probab=96.32  E-value=0.01  Score=49.06  Aligned_cols=75  Identities=29%  Similarity=0.282  Sum_probs=49.0

Q ss_pred             hhhCCccEEEEE-ecccc--HHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhh-HHhhhcCCCccEEecCHHHHHhhhC
Q 026265          166 EDVKGSKWLVLR-FGMFN--FEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTP-LLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       166 ~~i~~~~~v~~~-~~~~~--~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~-l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      +..+.++.+.+. +.+.+  .+.+..+++.+++.++++++||...... .++.. ..++++..++++|+||..|+..|+|
T Consensus        45 ~~~~~~~al~ik~G~l~~~~~~~i~~~~~~~~~~~~pvVlDPV~~~~s-~~r~~~~~~Ll~~~~~~vITpN~~E~~~L~g  123 (249)
T TIGR00694        45 ELAKIAGALVINIGTLDKESIEAMIAAGKSANELGVPVVLDPVGVGAT-KFRTETALELLSEGRFAAIRGNAGEIASLAG  123 (249)
T ss_pred             HHHHHcCceEEeCCCCCHHHHHHHHHHHHHHHhcCCCEEEcccccccc-hhHHHHHHHHHhhcCCceeCCCHHHHHHHhC
Confidence            456778999999 43322  3455666677788899999999643211 12222 2334542247999999999999975

This model represents the hydoxyethylthiazole kinase, ThiM, of a number of bacteria, and C-terminal domains of bifunctional thiamine biosynthesis proteins of Saccharomyces cerevisiae and Schizosaccharomyces pombe, in which the N-terminal domain corresponds to the bacterial thiamine-phosphate pyrophosphorylase (EC 2.5.1.3), ThiE.

>PF02110 HK: Hydroxyethylthiazole kinase family; InterPro: IPR000417 Thiamine pyrophosphate (TPP), a required cofactor for many enzymes in the cell, is synthesised de novo in Salmonella typhimurium []

Probab=96.31  E-value=0.0095  Score=48.92  Aligned_cols=75  Identities=27%  Similarity=0.344  Sum_probs=50.1

Q ss_pred             hhhCCccEEEEEecccc---HHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhh-HHhhhcCCCccEEecCHHHHHhhhC
Q 026265          166 EDVKGSKWLVLRFGMFN---FEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTP-LLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       166 ~~i~~~~~v~~~~~~~~---~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~-l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      +..+.++.++++....+   .+.+....+.+++.+++++|||-.... -.+|.+ ..+++...++++|++|..|...|.|
T Consensus        45 e~~~~a~al~iNiGTl~~~~~~~m~~A~~~A~~~~~PvVLDPVgvGa-s~~R~~~~~~LL~~~~~~vIrGN~sEI~aLag  123 (246)
T PF02110_consen   45 EFASIADALVINIGTLTDERIEAMKKAAKAANELGIPVVLDPVGVGA-SKFRTEFALELLNNYKPTVIRGNASEIAALAG  123 (246)
T ss_dssp             HHHHCTSEEEEESTTSSHHHHHHHHHHHHHHHHTT--EEEE-TTBTT-BHHHHHHHHHHHCHS--SEEEEEHHHHHHHHT
T ss_pred             HHHHHcCEEEEECCCCCHhHHHHHHHHHHHHHHcCCCEEEeCcccCC-cHHHHHHHHHHHHhCCCcEEEeCHHHHHHHhC
Confidence            45677899999933333   467788888999999999999954431 134444 4456633489999999999998875

Five kinase activities have been implicated in TPP synthesis, which involves joining a 4-methyl-5-(beta-hydroxyethyl)thiazole (THZ) moiety and a 4-amino-5- hydroxymethyl-2-methylpyrimidine (HMP) moiety [, ]. THZ kinase (2.7.1.50 from EC) activity is involved in the salvage synthesis of TH-P from the thiazole: 2-methyl-4-amino-5-hydroxymethylpyrimidine diphosphate + 4-4-methyl-5-(2-phosphonooxyethyl)-thiazole = pyrophosphate + thiamin monophosphate Hydroxyethylthiazole kinase expression is regulated at the mRNA level by intracellular thiamin pyrophosphate [].; GO: 0004417 hydroxyethylthiazole kinase activity, 0009228 thiamine biosynthetic process; PDB: 1EKK_A 1ESQ_C 1C3Q_B 1ESJ_A 1EKQ_B 3HPD_A 3DZV_A 3NL5_A 3NL2_A 3NM1_A ....

>PRK12413 phosphomethylpyrimidine kinase; Provisional

Probab=96.29  E-value=0.013  Score=48.37  Aligned_cols=132  Identities=19%  Similarity=0.232  Sum_probs=69.0

Q ss_pred             eEEeeecCChhH-HHHHHHHHhCCceeeceeecCCCceeEEEEEcCCCCeeeeeCccccCCCCcccCChhhhCCccEEEE
Q 026265           98 GLIGAYGDDQQG-QLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLVL  176 (241)
Q Consensus        98 ~~vg~vG~D~~g-~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~~~~i~~~~~v~~  176 (241)
                      ..++.-|.|+.| .=+...++..    .........+.+++..+++.|.. +..  -....+. +++  +.+...++..+
T Consensus         5 ~vl~iag~d~~ggaG~~aD~~~~----~~~~~~~~~~~t~~t~~~~~G~~-v~~--~~~~~l~-~~l--~~l~~~~~~~i   74 (253)
T PRK12413          5 YILAISGNDIFSGGGLHADLATY----TRNGLHGFVAVTCLTAMTEKGFE-VFP--VDKEIFQ-QQL--DSLKDVPFSAI   74 (253)
T ss_pred             eEEEEeeeCCCCHHHHHHHHHHH----HHcCCccCeeeEEEecccCCceE-EEE--CCHHHHH-HHH--HHhhCCCCCEE
Confidence            345666777644 4477666642    11122222456666666666632 211  1111111 111  11233444444


Q ss_pred             E-eccccHHHHHHHHHHHH-HCCCeEEEeCCchHH------HhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          177 R-FGMFNFEVIQAAIRIAK-QEGLSVSMDLASFEM------VRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       177 ~-~~~~~~~~~~~~~~~a~-~~g~~i~~D~~~~~~------~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      . +.+-+.+....+++.++ +.+.+++|||.....      .+.+.+.+.++++  ++|+++||+.|++.|+|
T Consensus        75 ~~G~l~~~~~~~~~~~~~~~~~~~~vv~DPv~~~~~~~~~~~~~~~~~l~~ll~--~~dli~pN~~E~~~L~g  145 (253)
T PRK12413         75 KIGLLPNVEIAEQALDFIKGHPGIPVVLDPVLVCKETHDVEVSELRQELIQFFP--YVTVITPNLVEAELLSG  145 (253)
T ss_pred             EECCcCCHHHHHHHHHHHHhCCCCCEEEcCceecCCCCccccHHHHHHHHHHhc--cCcEECCCHHHHHHHhC
Confidence            4 22213455555565555 468999999853321      0122334445666  89999999999999976

>PRK09355 hydroxyethylthiazole kinase; Validated

Probab=96.24  E-value=0.012  Score=48.96  Aligned_cols=75  Identities=29%  Similarity=0.332  Sum_probs=48.5

Q ss_pred             hhhCCccEEEEEeccccHH---HHHHHHHHHHHCCCeEEEeCCchHHHhhchhhH-HhhhcCCCccEEecCHHHHHhhhC
Q 026265          166 EDVKGSKWLVLRFGMFNFE---VIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPL-LQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       166 ~~i~~~~~v~~~~~~~~~~---~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l-~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      +.++.++.+++...+...+   .+..+++.+++.++++++||...... .++.++ .++++..+.++++||..|+..|+|
T Consensus        50 ~~~~~~~alvi~~G~l~~~~~~~i~~~~~~a~~~~~pvVlDpv~~~~~-~~~~~~~~~ll~~~~~~vItPN~~E~~~L~g  128 (263)
T PRK09355         50 EMAKIAGALVINIGTLTEERIEAMLAAGKIANEAGKPVVLDPVGVGAT-SYRTEFALELLAEVKPAVIRGNASEIAALAG  128 (263)
T ss_pred             HHHHhcCceEEeCCCCCHHHHHHHHHHHHHHHhcCCCEEECCcccCcc-hhhHHHHHHHHHhcCCcEecCCHHHHHHHhC
Confidence            4567889999993333433   35555666788899999999643211 233322 223332267999999999999975

>PRK05756 pyridoxamine kinase; Validated

Probab=95.90  E-value=0.019  Score=48.31  Aligned_cols=72  Identities=17%  Similarity=-0.011  Sum_probs=45.9

Q ss_pred             hCCccEEEEEecc--ccHHHHHHHHHHHHHCC--CeEEEeCCchH------HHhhchhhHH-hhhcCCCccEEecCHHHH
Q 026265          168 VKGSKWLVLRFGM--FNFEVIQAAIRIAKQEG--LSVSMDLASFE------MVRNFRTPLL-QLLESGDVDLCFANEDEA  236 (241)
Q Consensus       168 i~~~~~v~~~~~~--~~~~~~~~~~~~a~~~g--~~i~~D~~~~~------~~~~~~~~l~-~~l~~~~~d~l~~N~~Ea  236 (241)
                      +...+++...+..  ...+.+.++++.+++.+  +.+++||.-..      ..+...+.+. .+++  ++|+++||..|+
T Consensus        72 l~~~~~v~~G~l~~~~~~~~v~~~i~~~k~~~~~~~~v~DPv~~d~~~~~~~~~~~~~~~~~~ll~--~adiitpN~~Ea  149 (286)
T PRK05756         72 LGECDAVLSGYLGSAEQGEAILDAVRRVKAANPQALYFCDPVMGDPEKGCIVAPGVAEFLRDRALP--AADIITPNLFEL  149 (286)
T ss_pred             cccCCEEEECCCCCHHHHHHHHHHHHHHHHhCCCceEEECCccccCCCCEEECccHhHHHHHhhcc--cccEecCCHHHH
Confidence            4578877666521  12467788888877766  45788974221      0011112233 3666  999999999999


Q ss_pred             HhhhC
Q 026265          237 AELVR  241 (241)
Q Consensus       237 ~~l~g  241 (241)
                      +.|+|
T Consensus       150 ~~L~g  154 (286)
T PRK05756        150 EWLSG  154 (286)
T ss_pred             HHHhC
Confidence            99875

>COG2145 ThiM Hydroxyethylthiazole kinase, sugar kinase family [Coenzyme metabolism]

Probab=95.82  E-value=0.029  Score=45.95  Aligned_cols=88  Identities=23%  Similarity=0.212  Sum_probs=58.9

Q ss_pred             cccCCCCcccCC-hhhhCCccEEEEE-ecccc--HHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhh-HHhhhcCCCcc
Q 026265          153 SNAVKIQADELI-AEDVKGSKWLVLR-FGMFN--FEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTP-LLQLLESGDVD  227 (241)
Q Consensus       153 g~~~~l~~~~~~-~~~i~~~~~v~~~-~~~~~--~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~-l~~~l~~~~~d  227 (241)
                      |+.+-+....-. .+..+-++.+.++ +.+..  .+.++...+.+++.|.++++||-...- ..+|.. ..++|.+.+++
T Consensus        37 GaSP~Ma~~~eE~~e~~kia~AL~INIGTL~~~~~~~m~~A~~~An~~~~PvvLDPVgvgA-t~~R~~~~~~LL~~~~~~  115 (265)
T COG2145          37 GASPVMADAPEEVEEFAKIADALLINIGTLSAERIQAMRAAIKAANESGKPVVLDPVGVGA-TKFRTKFALELLAEVKPA  115 (265)
T ss_pred             CCCchhccCHHHHHHHHHhccceEEeeccCChHHHHHHHHHHHHHHhcCCCEEecCccCCc-hHHHHHHHHHHHHhcCCc
Confidence            555544432211 2455667778888 43322  577888899999999999999954321 134544 34466654589


Q ss_pred             EEecCHHHHHhhhC
Q 026265          228 LCFANEDEAAELVR  241 (241)
Q Consensus       228 ~l~~N~~Ea~~l~g  241 (241)
                      +|++|..|...|.|
T Consensus       116 ~IrGN~sEI~~Lag  129 (265)
T COG2145         116 AIRGNASEIAALAG  129 (265)
T ss_pred             EEeccHHHHHHHhc
Confidence            99999999988864

>cd01938 ADPGK_ADPPFK ADP-dependent glucokinase (ADPGK) and phosphofructokinase (ADPPFK)

Probab=95.80  E-value=0.095  Score=46.88  Aligned_cols=159  Identities=18%  Similarity=0.089  Sum_probs=85.0

Q ss_pred             CceeecCChHHHHHHHHHhhcCC-ceeEEeeecCChhHHHHHHHHHhCCcee------------eceeecCCCceeEEEE
Q 026265           73 PIKTIAGGSVTNTIRGLSVGFGV-PCGLIGAYGDDQQGQLFVSNMQFSGVDV------------SRLRMKRGPTGQCVCL  139 (241)
Q Consensus        73 ~~~~~~GG~~~N~a~~la~~LG~-~~~~vg~vG~D~~g~~i~~~l~~~gvd~------------~~~~~~~~~T~~~~~~  139 (241)
                      ....+.||.+.-.|..++ ++|. +|.+-+++...    ...+.+...+|-.            +.+...+....+. -+
T Consensus       100 ~~~~~mGGnAgimAn~la-~~g~~~Vil~~p~~~k----~~~~L~~d~~i~~p~~e~~~~~d~IHlIlEy~~G~~~~-~~  173 (445)
T cd01938         100 WDELRMGGNAGLMANRLA-GEGDLKVLLGVPQSSK----LQAELFLDGPIVVPTFENLIEEDEIHLILEYPRGESWG-DF  173 (445)
T ss_pred             CceEEeCChHHHHHHHHH-hcCCceEEEecCCCcH----HHHHhCCCCCeeecccccCCCCCccEEEEEcCCCCEec-ce
Confidence            567999999999999999 8998 77777665432    2233333222221            1111111112222 12


Q ss_pred             EcCCCCeeeeeCccccCCCCcccCChhhhCC-ccEEEEE-ecccc-----HHHHHHHHHHHH------HCCCeEEEeCCc
Q 026265          140 VDASGNRTMRPCLSNAVKIQADELIAEDVKG-SKWLVLR-FGMFN-----FEVIQAAIRIAK------QEGLSVSMDLAS  206 (241)
Q Consensus       140 ~~~~g~r~~~~~~g~~~~l~~~~~~~~~i~~-~~~v~~~-~~~~~-----~~~~~~~~~~a~------~~g~~i~~D~~~  206 (241)
                      +-|.-+|-++.+...+.....+++-.+..+. +|.++++ +.++.     .....+.++.++      +..+++-|.+.+
T Consensus       174 ~aPraNRfI~~~d~~n~l~~~ee~~~~i~~~~pDl~vlSGlqmm~~~~~~~~~~~~~l~~~~~~l~~l~~~i~iH~E~As  253 (445)
T cd01938         174 VAPRANRFIFHDDDNNPMLMREEFFSSILEFQPDLAVLSGLQMMEGQSFDEGTRKELLERVKSILEILPPLIPIHLELAS  253 (445)
T ss_pred             EcCCCCeEEEecCCcchhhhhHHHHHHHhhcCCCEEEEechhhhcccCCChhhHHHHHHHHHHHHHhccccCcEEEEecc
Confidence            2233445555443333322222222233344 9999999 43321     122333333322      234888898865


Q ss_pred             hHHHhhchhhHH-hhhcCCCccEEecCHHHHHhhh
Q 026265          207 FEMVRNFRTPLL-QLLESGDVDLCFANEDEAAELV  240 (241)
Q Consensus       207 ~~~~~~~~~~l~-~~l~~~~~d~l~~N~~Ea~~l~  240 (241)
                      ..- ..++..+. .+++  ++|-+=+|+.|...|+
T Consensus       254 ~~d-~~l~~~i~~~ilp--~VDSlGmNEqEL~~l~  285 (445)
T cd01938         254 TVD-EELREEILHEVVP--YVDSLGLNEQELANLL  285 (445)
T ss_pred             ccc-HHHHHHHHHHhcc--cccccccCHHHHHHHH
Confidence            421 13444444 4666  9999999999987764

ADPGK and ADPPFK are proteins that rely on ADP rather than ATP to donate a phosphoryl group. They are found in certain hyperthermophilic archaea and in higher eukaryotes. A functional ADPGK has been characterized in mouse and is assumed to be desirable during ischemia/hypoxia. ADPGK and ADPPFK contain a large and a small domain with the binding site located in a groove between the domains. Partial domain closing is seen when ADP is bound, and further domain closing is observed when glucose is also bound. The oligomerization state apparently varies depending on the species, with some existing as monomers, some as dimers, and some as tetramers.

>PRK08573 phosphomethylpyrimidine kinase; Provisional

Probab=95.73  E-value=0.021  Score=51.35  Aligned_cols=67  Identities=21%  Similarity=0.220  Sum_probs=46.3

Q ss_pred             cEEEEEeccccHHHHHHHHHHHHHCCCeEEEeCCchHHH--hhch----hhH-HhhhcCCCccEEecCHHHHHhhhC
Q 026265          172 KWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMV--RNFR----TPL-LQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       172 ~~v~~~~~~~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~--~~~~----~~l-~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      +.+.+++ +.+.+.+..+++.+++.|.+++|||......  ..+.    +.+ .++++  ++|+++||+.|++.|+|
T Consensus        73 ~~ik~G~-l~~~e~~~~i~~~~k~~g~~vv~DPv~~~~sG~~l~~~~~~~~l~~~llp--~adli~pN~~Ea~~L~g  146 (448)
T PRK08573         73 DAAKTGM-LSNREIIEAVAKTVSKYGFPLVVDPVMIAKSGAPLLREDAVDALIKRLLP--LATVVTPNRPEAEKLTG  146 (448)
T ss_pred             CEEEECC-cCCHHHHHHHHHHHHHcCCCEEEcCccccCCCCcCCCHHHHHHHHHhhhc--cCEEEcCCHHHHHHHhC
Confidence            4555554 2367888999999999999999998422100  0111    122 34666  89999999999999976

>COG0351 ThiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [Coenzyme metabolism]

Probab=95.71  E-value=0.026  Score=46.68  Aligned_cols=68  Identities=19%  Similarity=0.078  Sum_probs=45.5

Q ss_pred             ccEEEEEeccccHHHHHHHHHHHHHCC-CeEEEeCC-----chH-HHhhchhhHH-hhhcCCCccEEecCHHHHHhhhC
Q 026265          171 SKWLVLRFGMFNFEVIQAAIRIAKQEG-LSVSMDLA-----SFE-MVRNFRTPLL-QLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       171 ~~~v~~~~~~~~~~~~~~~~~~a~~~g-~~i~~D~~-----~~~-~~~~~~~~l~-~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      .+.+=+. .+.+.+.+..+.+..++.+ .++++||-     ... ..+...+.+. ++++  ++++++||..||+.|+|
T Consensus        73 v~avKtG-ML~~~eiie~va~~l~~~~~~~vV~DPVmvaksG~~Ll~~~a~~~l~~~LlP--~a~vvTPNl~EA~~L~g  148 (263)
T COG0351          73 VDAVKTG-MLGSAEIIEVVAEKLKKYGIGPVVLDPVMVAKSGDPLLDEEAVEALREELLP--LATVVTPNLPEAEALSG  148 (263)
T ss_pred             CCEEEEC-CcCCHHHHHHHHHHHHhcCCCcEEECceEEEcCCCcccChHHHHHHHHHhhc--cCeEecCCHHHHHHHcC
Confidence            3344444 3236788888888888888 77999983     211 1112223333 5677  99999999999999986

>PRK12616 pyridoxal kinase; Reviewed

Probab=95.71  E-value=0.033  Score=46.55  Aligned_cols=69  Identities=17%  Similarity=0.084  Sum_probs=47.0

Q ss_pred             CccEEEEEeccccHHHHHHHHHHHHHCC-CeEEEeCCchHH------HhhchhhHHh-hhcCCCccEEecCHHHHHhhhC
Q 026265          170 GSKWLVLRFGMFNFEVIQAAIRIAKQEG-LSVSMDLASFEM------VRNFRTPLLQ-LLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       170 ~~~~v~~~~~~~~~~~~~~~~~~a~~~g-~~i~~D~~~~~~------~~~~~~~l~~-~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      +.+.+.+.+. .+.+.+..+.+.+++.+ .++++||.....      .....+.+.+ +++  .+|+++||..|++.|+|
T Consensus        74 ~~~aikiG~l-~s~~~i~~i~~~l~~~~~~~vV~DPV~~~~~g~~~l~~~~~~~l~~~L~~--~advitpN~~Ea~~L~g  150 (270)
T PRK12616         74 GVDAMKTGML-PTVDIIELAADTIKEKQLKNVVIDPVMVCKGANEVLYPEHAEALREQLAP--LATVITPNLFEAGQLSG  150 (270)
T ss_pred             CCCEEEECCC-CCHHHHHHHHHHHHhcCCCCEEEccceecCCCCcccCHHHHHHHHHHhhc--cceEecCCHHHHHHHcC
Confidence            4678888853 35677777888888776 469999964210      0111233433 555  89999999999999875

>PLN02978 pyridoxal kinase

Probab=95.60  E-value=0.027  Score=48.06  Aligned_cols=69  Identities=10%  Similarity=0.028  Sum_probs=45.5

Q ss_pred             ccEEEEEecc--ccHHHHHHHHHHHHH--CCCeEEEeCCchHH-----HhhchhhHH-hhhcCCCccEEecCHHHHHhhh
Q 026265          171 SKWLVLRFGM--FNFEVIQAAIRIAKQ--EGLSVSMDLASFEM-----VRNFRTPLL-QLLESGDVDLCFANEDEAAELV  240 (241)
Q Consensus       171 ~~~v~~~~~~--~~~~~~~~~~~~a~~--~g~~i~~D~~~~~~-----~~~~~~~l~-~~l~~~~~d~l~~N~~Ea~~l~  240 (241)
                      .+.+.+.|..  ...+.+.++++.+++  .++++++||.....     .+...+.+. ++++  .+|+++||..|++.|+
T Consensus        87 ~~ai~~G~l~s~~~~~~v~~~l~~~~~~~~~~~vvlDPvm~d~G~l~~~~~~~~~~~~~ll~--~adiitPN~~Ea~~L~  164 (308)
T PLN02978         87 YTHLLTGYIGSVSFLRTVLRVVKKLRSVNPNLTYVCDPVLGDEGKLYVPPELVPVYREKVVP--LATMLTPNQFEAEQLT  164 (308)
T ss_pred             cCEEEecccCCHHHHHHHHHHHHHHHHhCCCCeEEECCcccCCCCccCChhHHHHHHHHHHh--hCCeeccCHHHHHHHh
Confidence            6778777531  124566777777776  45678999963210     011223343 4777  9999999999999997


Q ss_pred             C
Q 026265          241 R  241 (241)
Q Consensus       241 g  241 (241)
                      |
T Consensus       165 g  165 (308)
T PLN02978        165 G  165 (308)
T ss_pred             C
Confidence            6

>PRK03979 ADP-specific phosphofructokinase; Provisional

Probab=95.53  E-value=0.25  Score=44.26  Aligned_cols=159  Identities=17%  Similarity=0.155  Sum_probs=82.6

Q ss_pred             CceeecCChHHHHHHHHHhhcCCce--eEEeeecCChhHHHHHHHHHh-CCceeec-----e-------ee-cCCCceeE
Q 026265           73 PIKTIAGGSVTNTIRGLSVGFGVPC--GLIGAYGDDQQGQLFVSNMQF-SGVDVSR-----L-------RM-KRGPTGQC  136 (241)
Q Consensus        73 ~~~~~~GG~~~N~a~~la~~LG~~~--~~vg~vG~D~~g~~i~~~l~~-~gvd~~~-----~-------~~-~~~~T~~~  136 (241)
                      ....+.||.+.-+|..++ ++|...  .+.+.++     +..++.|.. .++-.--     +       .. .+.++-.-
T Consensus        96 ~~~~rmGGqAgimAn~la-~lg~~~vV~~~p~ls-----k~qa~lf~~~~~i~~P~~e~g~l~l~~p~e~~~~~d~~~IH  169 (463)
T PRK03979         96 YDEERMGGQAGIISNLLA-ILDLKKVIAYTPWLS-----KKQAEMFVDSDNLLYPVVENGKLVLKKPREAYKPNDPLKIN  169 (463)
T ss_pred             cceEEeCChHHHHHHHHH-hcCCceEEEeCCCCC-----HHHHHHhCCCCCeeeccccCCceeeccchhhccCCCCcceE
Confidence            455799999999999999 899884  4444444     344455522 1221110     0       00 01122222


Q ss_pred             EEEEcCCC---------------CeeeeeCccccCCCCc-ccCC---hhhhCCccEEEEE-ecccc------------HH
Q 026265          137 VCLVDASG---------------NRTMRPCLSNAVKIQA-DELI---AEDVKGSKWLVLR-FGMFN------------FE  184 (241)
Q Consensus       137 ~~~~~~~g---------------~r~~~~~~g~~~~l~~-~~~~---~~~i~~~~~v~~~-~~~~~------------~~  184 (241)
                      +|+-=+.|               +|-++.+...+..+.. +++.   .+.-.++|.+.++ +..+.            .+
T Consensus       170 ~I~Ey~~G~~~~l~~~~~~aPRaNRfI~s~D~~n~~l~~~eef~~~L~ei~~~~D~avlSG~q~i~~~y~dg~~~~~~l~  249 (463)
T PRK03979        170 RIFEFKKGLEFKLGGEKIIVPRSNRFIVSSRPEWLRIEIKDELKEFLPEIGKMVDGAILSGYQGIKEEYSDGKTAEYYLK  249 (463)
T ss_pred             EEEEeCCCCEEEecCccEecCCCCeEEEecCCCCccceecHHHHHHHHhhccCCCEEEEechhhhhccccccccHHHHHH
Confidence            22222233               3433333332233321 1221   1223569999999 43321            12


Q ss_pred             HHHHHHHHH--HHCCCeEEEeCCchHHHhhchhhHH-hhhcCCCccEEecCHHHHHhhh
Q 026265          185 VIQAAIRIA--KQEGLSVSMDLASFEMVRNFRTPLL-QLLESGDVDLCFANEDEAAELV  240 (241)
Q Consensus       185 ~~~~~~~~a--~~~g~~i~~D~~~~~~~~~~~~~l~-~~l~~~~~d~l~~N~~Ea~~l~  240 (241)
                      ...+.++..  +..++++-|...+..- ..++..+. .+++  ++|-+=+|++|...+.
T Consensus       250 r~~~~i~~L~~~~~~i~iH~E~As~~~-~~ir~~i~~~ilp--~vDSlGmNE~ELa~l~  305 (463)
T PRK03979        250 RAKEDIKLLKKKNKDIKIHVEFASIQN-REIRKKIITYILP--HVDSVGMDETEIANIL  305 (463)
T ss_pred             HHHHHHHHHhhCCCCceEEEEeccccC-HHHHHHHHHhhcc--ccccccCCHHHHHHHH
Confidence            233333333  3347889998764421 13444544 4666  9999999999988653

>PRK14038 ADP-dependent glucokinase; Provisional

Probab=95.47  E-value=0.73  Score=41.25  Aligned_cols=160  Identities=17%  Similarity=0.144  Sum_probs=88.2

Q ss_pred             CceeecCChHHHHHHHHHhhcCCceeEEeeecCChhHHHHHHHHHhCCce------------------------eeceee
Q 026265           73 PIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVD------------------------VSRLRM  128 (241)
Q Consensus        73 ~~~~~~GG~~~N~a~~la~~LG~~~~~vg~vG~D~~g~~i~~~l~~~gvd------------------------~~~~~~  128 (241)
                      ....+.||.+.-.|..++...|.+|  ++.++..  .+...+.+...+|-                        .+++..
T Consensus       104 ~~~~rmGGnAgimAn~la~~~g~~V--ia~~~~l--sk~qa~lf~~~~I~~p~~~~~~l~l~~p~e~~~~~~d~IH~I~E  179 (453)
T PRK14038        104 WDELRMGGQVGIMANLLGGVYGVPV--IAHVPQL--SKLQASLFLDGPIYVPTFEGGELKLVHPREFVGDEENCIHYIYE  179 (453)
T ss_pred             cceEEeCChHHHHHHHHHhhcCCce--EEECCCc--chhhHhhccCCCEEeccccCCcceeccchhcccCCCCccEEEEE
Confidence            3469999999999999972355665  5555532  22222323332332                        122221


Q ss_pred             cCCCceeEEEEEcCCCCeeeeeCccccCCCC-cccCC---hhhhCCccEEEEE-ecccc-------HHHHHHHHHHHHHC
Q 026265          129 KRGPTGQCVCLVDASGNRTMRPCLSNAVKIQ-ADELI---AEDVKGSKWLVLR-FGMFN-------FEVIQAAIRIAKQE  196 (241)
Q Consensus       129 ~~~~T~~~~~~~~~~g~r~~~~~~g~~~~l~-~~~~~---~~~i~~~~~v~~~-~~~~~-------~~~~~~~~~~a~~~  196 (241)
                      -+....+. -+.-|.-+|-++.+...+..+. .+++.   .+...++|.+.++ +..+.       .+.+.+.++..++.
T Consensus       180 y~~G~~~~-~~~aPRaNRfI~s~D~~N~~l~~~eef~~~l~ei~~~~Dl~vlSG~q~l~~~~~~~~l~~~~~~l~~l~~~  258 (453)
T PRK14038        180 FPRGFRVF-DFEAPRENRFIGAADDYNPNLYIRPEFRERFEEIAKKAELAIISGLQALTEENYREPFETVREHLKVLNER  258 (453)
T ss_pred             eCCCCEEe-eeEcCCCceEEEecCCCCcceeecHHHHHHHHhhccCCCEEEEEchhhhccccHHHHHHHHHHHHHhcCcC
Confidence            11112222 2222334455554444333332 12222   2445789999999 44321       12333444444456


Q ss_pred             CCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhh
Q 026265          197 GLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELV  240 (241)
Q Consensus       197 g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~  240 (241)
                      ++++-|.+.... -...++.+.++++  .+|-+-+|++|...+.
T Consensus       259 ~i~iH~EfAs~~-d~~~r~~i~~ilp--~vDSlGmNE~ELa~ll  299 (453)
T PRK14038        259 GIPAHLEFAFTP-DETVREEILGLLG--KFYSVGLNEVELASIM  299 (453)
T ss_pred             CceEEEEeeccc-hHHHHHHHHhhCc--cccccccCHHHHHHHH
Confidence            888999886432 1246677778887  9999999999987664

>PTZ00344 pyridoxal kinase; Provisional

Probab=95.38  E-value=0.034  Score=47.15  Aligned_cols=69  Identities=13%  Similarity=0.124  Sum_probs=42.2

Q ss_pred             CccEEEEEeccccHHHHHH---HHHHHHHCC--CeEEEeCCchH-----HHhhchhhHHhhhcCCCccEEecCHHHHHhh
Q 026265          170 GSKWLVLRFGMFNFEVIQA---AIRIAKQEG--LSVSMDLASFE-----MVRNFRTPLLQLLESGDVDLCFANEDEAAEL  239 (241)
Q Consensus       170 ~~~~v~~~~~~~~~~~~~~---~~~~a~~~g--~~i~~D~~~~~-----~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l  239 (241)
                      +.+++...+. -+.+.+..   +++.+++.+  +++++||.-.+     ..+...+.+.++++  ++|+++||+.|++.|
T Consensus        77 ~~~~v~sG~l-~~~~~~~~i~~~l~~~~~~~~~~~vv~DPv~~~~g~l~~~~~~~~~~~~ll~--~~dii~pN~~E~~~L  153 (296)
T PTZ00344         77 DYTYVLTGYI-NSADILREVLATVKEIKELRPKLIFLCDPVMGDDGKLYVKEEVVDAYRELIP--YADVITPNQFEASLL  153 (296)
T ss_pred             cCCEEEECCC-CCHHHHHHHHHHHHHHHHhCCCceEEECCccccCCceEeCHHHHHHHHHHhh--hCCEEeCCHHHHHHH
Confidence            3455665543 24444444   444445555  47999954211     01234445666777  899999999999999


Q ss_pred             hC
Q 026265          240 VR  241 (241)
Q Consensus       240 ~g  241 (241)
                      +|
T Consensus       154 ~g  155 (296)
T PTZ00344        154 SG  155 (296)
T ss_pred             hC
Confidence            76

>PF04587 ADP_PFK_GK: ADP-specific Phosphofructokinase/Glucokinase conserved region; InterPro: IPR007666 Although ATP is the most common phosphoryl group donor for kinases, certain hyperthermophilic archaea, such as Thermococcus litoralis and Pyrococcus furiosus, utilise unusual ADP-dependent glucokinases (ADPGKs) and phosphofructokinases (ADPPKKs) in their glycolytic pathways [, , ]

Probab=94.85  E-value=0.082  Score=47.43  Aligned_cols=157  Identities=20%  Similarity=0.241  Sum_probs=76.7

Q ss_pred             eeecCChHHHHHHHHHhhcCCcee-EEeeecCChhHHHHHHHHHhCCceeecee------------ecC-CCceeEEEEE
Q 026265           75 KTIAGGSVTNTIRGLSVGFGVPCG-LIGAYGDDQQGQLFVSNMQFSGVDVSRLR------------MKR-GPTGQCVCLV  140 (241)
Q Consensus        75 ~~~~GG~~~N~a~~la~~LG~~~~-~vg~vG~D~~g~~i~~~l~~~gvd~~~~~------------~~~-~~T~~~~~~~  140 (241)
                      ..+.||.+.-.|..+| .++.... +.++++.    +.+.+.| ..+|-+--+.            ..+ ...-.-+|+-
T Consensus        91 ~~r~GGnA~imAn~la-~l~~~~Vil~~p~~s----k~~~~l~-~~~i~~P~v~~~~~~l~~~~~a~~~~~~~~iH~IlE  164 (444)
T PF04587_consen   91 EERMGGNAGIMANRLA-NLEGCPVILYAPILS----KEQAELF-NDNIYVPVVENGELKLIHPREAFKEDDEDDIHLILE  164 (444)
T ss_dssp             EEEEESHHHHHHHHHC-CTT-SEEEEE-SS------HHHHTTS-SSSEEEEEEETTEEEEEEGGGS-STT----EEEEEE
T ss_pred             ccccCchHHHHHHHHH-hCCCCEEEEecCcCC----HHHHHhc-ccCcccccccCCcccccCchhccccCCccceEEEEE
Confidence            3469999999999998 7865544 4444653    4556666 3344221000            000 1222222222


Q ss_pred             cCCC-----------CeeeeeCccccCCCCc-ccCC---hhhhCCccEEEEE-ecccc------------HHHHHHHHHH
Q 026265          141 DASG-----------NRTMRPCLSNAVKIQA-DELI---AEDVKGSKWLVLR-FGMFN------------FEVIQAAIRI  192 (241)
Q Consensus       141 ~~~g-----------~r~~~~~~g~~~~l~~-~~~~---~~~i~~~~~v~~~-~~~~~------------~~~~~~~~~~  192 (241)
                      =+.|           +|-++.+...+..+.. +++.   .+...++|.+.++ +.++.            .+.+.+.++.
T Consensus       165 y~~G~~~~~~~aPraNRfI~s~D~~N~~l~~~e~f~~~l~~~~~~~d~~vlSGlq~l~~~~~d~~~~~~~l~~~~~~i~~  244 (444)
T PF04587_consen  165 YKKGEKWGDITAPRANRFIVSSDPYNPRLSILEEFFEALEEIAFKPDLAVLSGLQMLDEFYFDGETYEERLKRLKEQIKL  244 (444)
T ss_dssp             E-TTEEETTEE-SS-EEEEEEE-SSGGGTS--HHHHHSHHHHHTT-SEEEEE-GGG--TB-TTSTCHHHHHHHHHHHHHH
T ss_pred             cCCCCeecceecCcCceEEEecCCCCccccchHHHHHHHHhhccCCCEEEEeccccchhhccchhHHHHHHHHHHHHHHh
Confidence            1233           3444433333333332 2221   2345679999999 43321            1223333334


Q ss_pred             HH-HCCCeEEEeCCchHHHhhchhhHH-hhhcCCCccEEecCHHHHHhhh
Q 026265          193 AK-QEGLSVSMDLASFEMVRNFRTPLL-QLLESGDVDLCFANEDEAAELV  240 (241)
Q Consensus       193 a~-~~g~~i~~D~~~~~~~~~~~~~l~-~~l~~~~~d~l~~N~~Ea~~l~  240 (241)
                      .+ ..+++|-|.+.+..- ..++..+. .+++  ++|-+=+|++|...|+
T Consensus       245 l~~~~~~~iH~E~As~~d-~~l~~~i~~~ilp--~vDSlGmNEqEL~~l~  291 (444)
T PF04587_consen  245 LKSNPDIPIHLELASFAD-EELRKEILEKILP--HVDSLGMNEQELANLL  291 (444)
T ss_dssp             HH-HTT-EEEEE----SS-HHHHHHHHHHHGG--GSSEEEEEHHHHHHHH
T ss_pred             ccCCCCCceEEEeccccC-HHHHHHHHHHhhc--cccccccCHHHHHHHH
Confidence            44 578999998865421 13455544 6777  9999999999988763

ADPGKs and ADPPFKs exhibit significant similarity, and form an ADP-dependent kinase (ADPK) family, which was tentatively named the PFKC family []. A ~460-residue ADPK domain is also found in a bifunctional ADP-dependent gluco/phosphofructo- kinase (ADP-GK/PFK) from Methanocaldococcus jannaschii (Methanococcus jannaschii) as well as in homologous hypothetical proteins present in several eukaryotes []. The whole structure of the ADPK domain can be divided into large and small alpha/beta subdomains. The larger subdomain, which carries the ADP binding site, consists of a twisted 12-stranded beta sheet flanked on both faces by 13 alpha helices and three 3(10) helices, forming an alpha/beta 3-layer sandwich. The smaller subdomain, which covers the active site, forms an alpha/beta two-layer structure containing 5 beta strands and four alpha helices. The ADP molecule is buried in a shallow pocket in the large subdomain. The binding of substrate sugar induces a structural change, the small domain closing to form a complete substrate sugar binding site [, , ].; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0005975 carbohydrate metabolic process; PDB: 1GC5_A 1L2L_A 3DRW_B 1U2X_A 1UA4_A.

>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]

Probab=94.83  E-value=0.078  Score=44.21  Aligned_cols=73  Identities=12%  Similarity=0.058  Sum_probs=49.9

Q ss_pred             hhhCCccEEEEEecccc---HHHHHHHHHHHHHCCC--eEEEeCC--chH---HHhhchhhHH-hhhcCCCccEEecCHH
Q 026265          166 EDVKGSKWLVLRFGMFN---FEVIQAAIRIAKQEGL--SVSMDLA--SFE---MVRNFRTPLL-QLLESGDVDLCFANED  234 (241)
Q Consensus       166 ~~i~~~~~v~~~~~~~~---~~~~~~~~~~a~~~g~--~i~~D~~--~~~---~~~~~~~~l~-~~l~~~~~d~l~~N~~  234 (241)
                      +.+..+|.++..|.. +   ...+..+++..|+...  .+++||-  ...   ...+....+. ++++  .+|++.||.-
T Consensus        69 ~~~~~~davltGYlg-s~~qv~~i~~~v~~vk~~~P~~~~l~DPVMGD~gglYV~~~~~~~~~~~lip--~AdiiTPN~f  145 (281)
T COG2240          69 DKLGECDAVLTGYLG-SAEQVRAIAGIVKAVKEANPNALYLCDPVMGDPGGLYVAPEVAEAYRDELLP--LADIITPNIF  145 (281)
T ss_pred             ccccccCEEEEccCC-CHHHHHHHHHHHHHHhccCCCeEEEeCCcccCCCceeeccchHHHHHHhhcc--hhhEeCCCHH
Confidence            467789999999643 3   3556677777777744  4888982  221   1123333333 4777  9999999999


Q ss_pred             HHHhhhC
Q 026265          235 EAAELVR  241 (241)
Q Consensus       235 Ea~~l~g  241 (241)
                      |++.|+|
T Consensus       146 ELe~Ltg  152 (281)
T COG2240         146 ELEILTG  152 (281)
T ss_pred             HHHHHhC
Confidence            9999987

>TIGR02045 P_fruct_ADP ADP-specific phosphofructokinase

Probab=94.23  E-value=1.1  Score=39.96  Aligned_cols=157  Identities=15%  Similarity=0.196  Sum_probs=83.0

Q ss_pred             eeecCChHHHHHHHHHhhcCCce--eEEeeecCChhHHHHHHHHHhC-Cceeec--------ee----ec-CCCceeEEE
Q 026265           75 KTIAGGSVTNTIRGLSVGFGVPC--GLIGAYGDDQQGQLFVSNMQFS-GVDVSR--------LR----MK-RGPTGQCVC  138 (241)
Q Consensus        75 ~~~~GG~~~N~a~~la~~LG~~~--~~vg~vG~D~~g~~i~~~l~~~-gvd~~~--------~~----~~-~~~T~~~~~  138 (241)
                      ..+.||.+.-+|..++ ++|..+  .+.+.++     +..++.|... +|-.--        ..    .. ++++-.-+|
T Consensus        85 ~~rmGGqAgimAn~la-~lg~~~vI~~~~~ls-----~~qa~lf~~~~ni~~p~~e~g~l~l~~~~e~~~e~d~~~IH~I  158 (446)
T TIGR02045        85 YERMGGQAGIISNLLG-RLGLKKVIAYTPFLS-----KRQAEMFVATGNILYPVVENGKLVLKPPGEAYREGDPSKVNRI  158 (446)
T ss_pred             eeeeCCHHHHHHHHHH-hcCCceEEEeCCCCC-----HHHHHHhCCcCceeeccccCCceeeccchhccCCCCCCceEEE
Confidence            3689999999999999 899885  3333444     4444555443 121110        00    00 112222222


Q ss_pred             E---------------EcCCCCeeeeeCccccCCCCc-ccC---ChhhhCCccEEEEE-ecccc------------HHHH
Q 026265          139 L---------------VDASGNRTMRPCLSNAVKIQA-DEL---IAEDVKGSKWLVLR-FGMFN------------FEVI  186 (241)
Q Consensus       139 ~---------------~~~~g~r~~~~~~g~~~~l~~-~~~---~~~~i~~~~~v~~~-~~~~~------------~~~~  186 (241)
                      +               +-|.-+|-++.+...+..+.. +++   ..+.-..+|.+.++ +..+.            .+..
T Consensus       159 ~Ey~~G~~~~lg~~~~~aPRaNRfI~s~D~~n~~l~~~~~l~~~~~~i~~~~d~~vlSG~q~m~~~y~dg~~~~~~~er~  238 (446)
T TIGR02045       159 FEFRKGTNFKLGGETIKVPRSGRFIVSSRPESLRIETKDQLRKFLPEIGEPVDGAILSGYQGIKEEYSDGKTAKYYLERA  238 (446)
T ss_pred             EEeCCCCeeecCCceEeccCCCeEEEecCCccccceecHHHHHhhhhhhhcccEEEEEchhhhhhhccCCccHhHHHHHH
Confidence            2               223333444433332222211 111   12344678999999 43321            2233


Q ss_pred             HHHHHHHHH-CCCeEEEeCCchHHHhhchhhHH-hhhcCCCccEEecCHHHHHhhh
Q 026265          187 QAAIRIAKQ-EGLSVSMDLASFEMVRNFRTPLL-QLLESGDVDLCFANEDEAAELV  240 (241)
Q Consensus       187 ~~~~~~a~~-~g~~i~~D~~~~~~~~~~~~~l~-~~l~~~~~d~l~~N~~Ea~~l~  240 (241)
                      .+.++..++ .++++-|...+..- ..++..+. .+++  ++|-+-+|++|...+.
T Consensus       239 ~~~i~~L~~~~~i~iH~E~As~~~-~~l~~~i~~~ilp--~vDSlGMNE~ELa~ll  291 (446)
T TIGR02045       239 KEDIELLKKNKDLKIHVEFASIQN-REIRKKVVTNIFP--HVDSVGMDEAEIANVL  291 (446)
T ss_pred             HHHHHHHhhCCCCeEEEEeccccc-HHHHHHHHHhhcc--ccccccCCHHHHHHHH
Confidence            444444433 67899998864421 13444444 4666  9999999999988764

Phosphofructokinase is a key enzyme of glycolysis. The phosphate group donor for different subtypes of phosphofructokinase can be ATP, ADP, or pyrophosphate. This family consists of ADP-dependent phosphofructokinases. Members are more similar to ADP-dependent glucokinases (excluded from this family) than to other phosphofructokinases.

>PLN02898 HMP-P kinase/thiamin-monophosphate pyrophosphorylase

Probab=93.86  E-value=0.18  Score=46.04  Aligned_cols=69  Identities=14%  Similarity=0.088  Sum_probs=46.1

Q ss_pred             CccEEEEEeccccHHHHHHHHHHHHHCCCe-EEEeCCchHH------HhhchhhHH-hhhcCCCccEEecCHHHHHhhhC
Q 026265          170 GSKWLVLRFGMFNFEVIQAAIRIAKQEGLS-VSMDLASFEM------VRNFRTPLL-QLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       170 ~~~~v~~~~~~~~~~~~~~~~~~a~~~g~~-i~~D~~~~~~------~~~~~~~l~-~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      +.+.+.+.+. .+.+.+..+++.+++.+.+ +++||.-...      .+...+.+. ++++  ++|+++||..|++.|+|
T Consensus        78 ~~~aik~G~l-~~~~~i~~i~~~l~~~~~~~vVlDPV~~~~~G~~l~~~~~~~~l~~~Ll~--~adiitPN~~Ea~~L~g  154 (502)
T PLN02898         78 PVDVVKTGML-PSAEIVKVLCQALKEFPVKALVVDPVMVSTSGDVLAGPSILSALREELLP--LATIVTPNVKEASALLG  154 (502)
T ss_pred             CCCEEEECCc-CCHHHHHHHHHHHHhCCCCCEEEccccccCCCCccCCHHHHHHHHHhhhc--cCeEEcCCHHHHHHHhC
Confidence            3566776643 3577788888888888775 9999942110      001122233 4566  89999999999999875

>PRK09517 multifunctional thiamine-phosphate pyrophosphorylase/synthase/phosphomethylpyrimidine kinase; Provisional

Probab=92.90  E-value=0.24  Score=47.55  Aligned_cols=68  Identities=16%  Similarity=0.034  Sum_probs=46.3

Q ss_pred             ccEEEEEeccccHHHHHHHHHHHHHC-CCeEEEeCCchHH------HhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          171 SKWLVLRFGMFNFEVIQAAIRIAKQE-GLSVSMDLASFEM------VRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       171 ~~~v~~~~~~~~~~~~~~~~~~a~~~-g~~i~~D~~~~~~------~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      .+.+-+.+. .+.+.+..+.+.+++. +.++++||.....      .+...+.+.++++  .+|+++||..|++.|+|
T Consensus       311 ~~aiKiGmL-~s~e~v~~i~~~l~~~~~~~vVlDPV~~~~sG~~l~~~~~~~~l~~Llp--~adlItPN~~Ea~~L~g  385 (755)
T PRK09517        311 VDAVKLGML-GSADTVDLVASWLGSHEHGPVVLDPVMVATSGDRLLDADATEALRRLAV--HVDVVTPNIPELAVLCG  385 (755)
T ss_pred             CCEEEECCC-CCHHHHHHHHHHHHhCCCCCEEEecccccCCCCCCCCHHHHHHHHHHhC--cccCccCCHHHHHHHhC
Confidence            566767642 3567777778888774 5779999853210      0112233556777  99999999999999976

>PRK14713 multifunctional hydroxymethylpyrimidine phosphokinase/4-amino-5-aminomethyl-2-methylpyrimidine hydrolase; Provisional

Probab=92.02  E-value=0.38  Score=44.29  Aligned_cols=69  Identities=20%  Similarity=0.125  Sum_probs=42.8

Q ss_pred             CccEEEEEeccccHHHHHHHHHHHHHC-CCeEEEeCCchH------HHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          170 GSKWLVLRFGMFNFEVIQAAIRIAKQE-GLSVSMDLASFE------MVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       170 ~~~~v~~~~~~~~~~~~~~~~~~a~~~-g~~i~~D~~~~~------~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      ..+.+.+.+. .+.+.+..+.+..++. +.++++||.-..      ..+...+.+.++++  ++|+++||..|++.|+|
T Consensus        98 ~~~aikiG~l-~s~~~i~~v~~~l~~~~~~~vVlDPv~~~~~G~~l~~~~~~~~~~~Ll~--~advItPN~~Ea~~Ltg  173 (530)
T PRK14713         98 TVDAVKIGML-GDAEVIDAVRTWLAEHRPPVVVLDPVMVATSGDRLLEEDAEAALRELVP--RADLITPNLPELAVLLG  173 (530)
T ss_pred             CCCEEEECCc-CCHHHHHHHHHHHHhCCCCCEEECCcccCCCCCCCCCHHHHHHHHHHhh--hhheecCChHHHHHHhC
Confidence            3677777742 2444444444444443 346899995311      01123344566777  99999999999999976

>PTZ00347 phosphomethylpyrimidine kinase; Provisional

Probab=91.22  E-value=0.66  Score=42.44  Aligned_cols=69  Identities=13%  Similarity=0.140  Sum_probs=41.9

Q ss_pred             hCCccE--EEEEeccccHHHHHHHHHHHHHCCCeEEEeCCchH-----HHh-----hchhhHH-hhhcCCCccEEecCHH
Q 026265          168 VKGSKW--LVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFE-----MVR-----NFRTPLL-QLLESGDVDLCFANED  234 (241)
Q Consensus       168 i~~~~~--v~~~~~~~~~~~~~~~~~~a~~~g~~i~~D~~~~~-----~~~-----~~~~~l~-~~l~~~~~d~l~~N~~  234 (241)
                      +++.++  +.+++ +.+.+.+..+.+.++  +.++++||....     ...     ...+.+. ++++  .+|+++||..
T Consensus       295 ~~d~~~~~Ik~G~-l~s~e~i~~i~~~l~--~~~vV~DPV~~~~~G~~l~~~~~~~~~~~~~~~~Ll~--~advitPN~~  369 (504)
T PTZ00347        295 MSDFNISVVKLGL-VPTARQLEIVIEKLK--NLPMVVDPVLVATSGDDLVAQKNADDVLAMYKERIFP--MATIITPNIP  369 (504)
T ss_pred             HhCCCCCEEEECC-cCCHHHHHHHHHHhc--CCCEEEcccceeCCCCcccchhHHHHHHHHHHHhccC--cceEEeCCHH
Confidence            444444  44443 235677777776665  678999974310     000     0111222 4566  8999999999


Q ss_pred             HHHhhhC
Q 026265          235 EAAELVR  241 (241)
Q Consensus       235 Ea~~l~g  241 (241)
                      |++.|+|
T Consensus       370 Ea~~L~g  376 (504)
T PTZ00347        370 EAERILG  376 (504)
T ss_pred             HHHHHhC
Confidence            9999976

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=89.70  E-value=1.3  Score=32.05  Aligned_cols=95  Identities=9%  Similarity=0.104  Sum_probs=54.5

Q ss_pred             Eeeec-CChhHHHHHHHHHhC-CceeeceeecCCCceeEEEEEcCCCCeeeeeCc--cccCCCCcccCChhhhCCccEEE
Q 026265          100 IGAYG-DDQQGQLFVSNMQFS-GVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCL--SNAVKIQADELIAEDVKGSKWLV  175 (241)
Q Consensus       100 vg~vG-~D~~g~~i~~~l~~~-gvd~~~~~~~~~~T~~~~~~~~~~g~r~~~~~~--g~~~~l~~~~~~~~~i~~~~~v~  175 (241)
                      ++.+| +...|..+.+.|.+. .++...+...+.          ..|++.-..++  .....+..++.+.+.+.+.|+++
T Consensus         2 V~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~----------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvf   71 (121)
T PF01118_consen    2 VAIVGATGYVGRELLRLLAEHPDFELVALVSSSR----------SAGKPLSEVFPHPKGFEDLSVEDADPEELSDVDVVF   71 (121)
T ss_dssp             EEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTT----------TTTSBHHHTTGGGTTTEEEBEEETSGHHHTTESEEE
T ss_pred             EEEECCCCHHHHHHHHHHhcCCCccEEEeeeecc----------ccCCeeehhccccccccceeEeecchhHhhcCCEEE
Confidence            45566 667899999999873 232222222211          02222111111  11112333334456678999999


Q ss_pred             EEeccccHHHHHHHHHHHHHCCCeEEEeCCchH
Q 026265          176 LRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFE  208 (241)
Q Consensus       176 ~~~~~~~~~~~~~~~~~a~~~g~~i~~D~~~~~  208 (241)
                      +.   .+.....++...+.+.|+ .++|.++.+
T Consensus        72 ~a---~~~~~~~~~~~~~~~~g~-~ViD~s~~~  100 (121)
T PF01118_consen   72 LA---LPHGASKELAPKLLKAGI-KVIDLSGDF  100 (121)
T ss_dssp             E----SCHHHHHHHHHHHHHTTS-EEEESSSTT
T ss_pred             ec---CchhHHHHHHHHHhhCCc-EEEeCCHHH
Confidence            98   356677888888888888 789998764

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PTZ00493 phosphomethylpyrimidine kinase; Provisional

Probab=89.36  E-value=0.95  Score=38.84  Aligned_cols=68  Identities=10%  Similarity=-0.040  Sum_probs=38.8

Q ss_pred             ccEEEEEeccccHHHHHHHHHHHHHC------CCeEEEeCCchHHH-hh-ch-----hhH-HhhhcCCCccEEecCHHHH
Q 026265          171 SKWLVLRFGMFNFEVIQAAIRIAKQE------GLSVSMDLASFEMV-RN-FR-----TPL-LQLLESGDVDLCFANEDEA  236 (241)
Q Consensus       171 ~~~v~~~~~~~~~~~~~~~~~~a~~~------g~~i~~D~~~~~~~-~~-~~-----~~l-~~~l~~~~~d~l~~N~~Ea  236 (241)
                      .+.+=+.. +.+.+.+..+.+..++.      ..++++||--.... .. ..     +.+ ..+++  ++|+++||..|+
T Consensus        74 i~aIKiGm-L~s~e~i~~v~~~l~~~~~~~~~~~~vVlDPVl~sssG~~L~~~~~~~~~~~~~Llp--~a~viTPN~~Ea  150 (321)
T PTZ00493         74 IDVVKLGV-LYSKKIISLVHNYITNMNKKRGKKLLVVFDPVFVSSSGCLLVENLEYIKFALDLICP--ISCIITPNFYEC  150 (321)
T ss_pred             CCEEEECC-cCCHHHHHHHHHHHHHhcccccCCCeEEECCceEECCCCccCCcHHHHHHHHHHhhc--cCEEECCCHHHH
Confidence            45565652 12455555555555443      22489998411000 01 12     112 24777  999999999999


Q ss_pred             HhhhC
Q 026265          237 AELVR  241 (241)
Q Consensus       237 ~~l~g  241 (241)
                      +.|+|
T Consensus       151 ~~L~g  155 (321)
T PTZ00493        151 KVILE  155 (321)
T ss_pred             HHHhC
Confidence            99875

>KOG2599 consensus Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme transport and metabolism]

Probab=88.67  E-value=0.84  Score=37.85  Aligned_cols=75  Identities=12%  Similarity=0.033  Sum_probs=47.3

Q ss_pred             hhhCCccEEEEEecc--ccHHHHHHHHHHHHHCCC--eEEEeCC--ch---HHHhhchhhHHhhhcCCCccEEecCHHHH
Q 026265          166 EDVKGSKWLVLRFGM--FNFEVIQAAIRIAKQEGL--SVSMDLA--SF---EMVRNFRTPLLQLLESGDVDLCFANEDEA  236 (241)
Q Consensus       166 ~~i~~~~~v~~~~~~--~~~~~~~~~~~~a~~~g~--~i~~D~~--~~---~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea  236 (241)
                      ..+..++++...|.-  .....+..+++..|+.+.  .-++||-  +.   +..++.-+.+.+++. +.+|+++||+-|+
T Consensus        77 nn~~~Y~~vLTGY~~n~~~l~~i~~iv~~lk~~np~~~wv~DPVmGDnG~lYV~eelipvYr~~i~-~ladiiTPNqFE~  155 (308)
T KOG2599|consen   77 NNLNKYDAVLTGYLPNVSFLQKIADIVKKLKKKNPNLTWVCDPVMGDNGRLYVPEELIPVYRDLII-PLADIITPNQFEA  155 (308)
T ss_pred             ccccccceeeeeccCChhHHHHHHHHHHHHHhcCCCeEEEeCccccCCccEeccHHHHHHHHHhhc-chhhhcCCcchhh
Confidence            345678999888642  124556666777776654  3446872  11   112233344555555 3799999999999


Q ss_pred             HhhhC
Q 026265          237 AELVR  241 (241)
Q Consensus       237 ~~l~g  241 (241)
                      +.|+|
T Consensus       156 EiLtg  160 (308)
T KOG2599|consen  156 EILTG  160 (308)
T ss_pred             hhhcC
Confidence            99987

>COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism]

Probab=83.94  E-value=18  Score=28.00  Aligned_cols=109  Identities=11%  Similarity=0.148  Sum_probs=66.3

Q ss_pred             ceeEEeeec--CChhHHHHHHHHHhCCceeeceeec---C-C-CceeEEEEEcCCCCeeeeeCcccc-CCC-----Cccc
Q 026265           96 PCGLIGAYG--DDQQGQLFVSNMQFSGVDVSRLRMK---R-G-PTGQCVCLVDASGNRTMRPCLSNA-VKI-----QADE  162 (241)
Q Consensus        96 ~~~~vg~vG--~D~~g~~i~~~l~~~gvd~~~~~~~---~-~-~T~~~~~~~~~~g~r~~~~~~g~~-~~l-----~~~~  162 (241)
                      +...-|.-|  ....-..+.+.|++.|..+..+...   + + .+|+.++-++ .|++..+.+.+.. ...     +.+.
T Consensus         7 ki~ITG~PGvGKtTl~~ki~e~L~~~g~kvgGf~t~EVR~gGkR~GF~Ivdl~-tg~~~~la~~~~~~~rvGkY~V~v~~   85 (179)
T COG1618           7 KIFITGRPGVGKTTLVLKIAEKLREKGYKVGGFITPEVREGGKRIGFKIVDLA-TGEEGILARVGFSRPRVGKYGVNVEG   85 (179)
T ss_pred             EEEEeCCCCccHHHHHHHHHHHHHhcCceeeeEEeeeeecCCeEeeeEEEEcc-CCceEEEEEcCCCCcccceEEeeHHH
Confidence            444455544  4456788999999998877765544   2 3 5676666654 6888877665431 111     1111


Q ss_pred             CC-------hhhhCCccEEEEE--ecc-ccHHHHHHHHHHHHHCCCeEEEeCC
Q 026265          163 LI-------AEDVKGSKWLVLR--FGM-FNFEVIQAAIRIAKQEGLSVSMDLA  205 (241)
Q Consensus       163 ~~-------~~~i~~~~~v~~~--~~~-~~~~~~~~~~~~a~~~g~~i~~D~~  205 (241)
                      +.       ..+++.+|++.++  +-+ +....+.+.++..-+.+.++++-++
T Consensus        86 le~i~~~al~rA~~~aDvIIIDEIGpMElks~~f~~~ve~vl~~~kpliatlH  138 (179)
T COG1618          86 LEEIAIPALRRALEEADVIIIDEIGPMELKSKKFREAVEEVLKSGKPLIATLH  138 (179)
T ss_pred             HHHHhHHHHHHHhhcCCEEEEecccchhhccHHHHHHHHHHhcCCCcEEEEEe
Confidence            11       1345678999999  322 2334566777777777887777765

>PRK10565 putative carbohydrate kinase; Provisional

Probab=83.16  E-value=4.1  Score=37.34  Aligned_cols=67  Identities=13%  Similarity=0.069  Sum_probs=43.3

Q ss_pred             hCCccEEEEEeccccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          168 VKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       168 i~~~~~v~~~~~~~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      ++.++.+.+.-.+...+....+++.+++.+.++++|+..-........     ..  ...+++||..|+.+|+|
T Consensus       318 ~~~~~a~viGpGlg~~~~~~~~~~~~~~~~~P~VLDAdaL~ll~~~~~-----~~--~~~VLTPh~gE~~rL~~  384 (508)
T PRK10565        318 LEWADVVVIGPGLGQQEWGKKALQKVENFRKPMLWDADALNLLAINPD-----KR--HNRVITPHPGEAARLLG  384 (508)
T ss_pred             hhcCCEEEEeCCCCCCHHHHHHHHHHHhcCCCEEEEchHHHHHhhCcc-----cc--CCeEECCCHHHHHHHhC
Confidence            466788999832223233455567777788999999975432111110     11  35799999999999975

>KOG3974 consensus Predicted sugar kinase [Carbohydrate transport and metabolism]

Probab=81.83  E-value=2.9  Score=34.58  Aligned_cols=74  Identities=12%  Similarity=0.119  Sum_probs=50.1

Q ss_pred             hhhhCCccEEEEEecc-cc---HHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhh
Q 026265          165 AEDVKGSKWLVLRFGM-FN---FEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELV  240 (241)
Q Consensus       165 ~~~i~~~~~v~~~~~~-~~---~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~  240 (241)
                      ...+++-..+++.-.+ ..   ...+.++++.++++++++++|...-+.+.+..+.+..-  + ..-+++||..|+.+|+
T Consensus        96 ~k~L~RlhavVIGPGLGRdp~~~k~i~~iley~~~~dvP~VIDaDGL~Lv~q~~e~l~~~--~-~~viLTPNvvEFkRLc  172 (306)
T KOG3974|consen   96 EKLLQRLHAVVIGPGLGRDPAILKEIAKILEYLRGKDVPLVIDADGLWLVEQLPERLIGG--Y-PKVILTPNVVEFKRLC  172 (306)
T ss_pred             HHHHhheeEEEECCCCCCCHHHHHHHHHHHHHHhcCCCcEEEcCCceEehhhchhhhhcc--C-ceeeeCCcHHHHHHHH
Confidence            3467788888888222 22   24567888899999999999997665333333322221  1 2368899999999986


Q ss_pred             C
Q 026265          241 R  241 (241)
Q Consensus       241 g  241 (241)
                      +
T Consensus       173 d  173 (306)
T KOG3974|consen  173 D  173 (306)
T ss_pred             H
Confidence            3

>PRK10076 pyruvate formate lyase II activase; Provisional

Probab=81.50  E-value=9.4  Score=30.74  Aligned_cols=66  Identities=17%  Similarity=0.159  Sum_probs=43.8

Q ss_pred             CccEEEEE-ecc-ccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEE-----ecCHHHHHhhhC
Q 026265          170 GSKWLVLR-FGM-FNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLC-----FANEDEAAELVR  241 (241)
Q Consensus       170 ~~~~v~~~-~~~-~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l-----~~N~~Ea~~l~g  241 (241)
                      ...-|.++ ++. ..++.+.++++.+++.|+.+.+|.+...    ..+.+.++++  .+|.+     .++.+..+.++|
T Consensus        38 sggGVt~SGGEPllq~~fl~~l~~~~k~~gi~~~leTnG~~----~~~~~~~l~~--~~D~~l~DiK~~d~~~~~~~tG  110 (213)
T PRK10076         38 SGGGVTLSGGEVLMQAEFATRFLQRLRLWGVSCAIETAGDA----PASKLLPLAK--LCDEVLFDLKIMDATQARDVVK  110 (213)
T ss_pred             CCCEEEEeCchHHcCHHHHHHHHHHHHHcCCCEEEECCCCC----CHHHHHHHHH--hcCEEEEeeccCCHHHHHHHHC
Confidence            34678888 332 3467889999999999999999998653    1233445555  55554     445666666654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	241
3ubo_A	354	The Crystal Structure Of Adenosine Kinase From Sino		3e-11
4e3a_A	352	Crystal Structure Of Probable Sugar Kinase Protein		6e-09
3loo_A	365	Crystal Structure Of Anopheles Gambiae Adenosine Ki		2e-05
3b3l_A	298	Crystal Structures Of Alternatively-Spliced Isoform		5e-05
3nbv_A	313	X-Ray Structure Of Ketohexokinase In Complex With A		6e-05
1lio_A	363	Structure Of Apo T. Gondii Adenosine Kinase Length		6e-04
1lii_A	363	Structure Of T. Gondii Adenosine Kinase Bound To Ad		9e-04

>pdb|3UBO|A Chain A, The Crystal Structure Of Adenosine Kinase From Sinorhizobium Meliloti Length = 354

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 94/220 (42%), Gaps = 14/220 (6%)
Query: 25  ALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTN 84
           A++D +AR D S L++    +G    +  +  E + S           P    +GGS  N
Sbjct: 14  AIVDIIARCDDSFLEENGIIKGAXNLINADRAELLYSRX--------GPAVEASGGSAGN 65
Query: 85  TIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMK-RGPTGQCVCLVDAS 143
           T  G++   G      G   DDQ G++F  +++  GV      +    PT +    V   
Sbjct: 66  TAAGVA-SLGGRAAYFGKVADDQLGEIFTHDIRAQGVHFQTKPLDGHPPTARSXIFVTED 124
Query: 144 GNRTMRPCLSNAVKIQADELIAEDVKGSKWLVLRFGMFN----FEVIQAAIRIAKQEGLS 199
           G R+    L   V++  +++  + V  SK       +++     + I+ A RIA   G  
Sbjct: 125 GERSXNTYLGACVELGPEDVEDDVVAQSKVTYFEGYLWDPPRAKDAIREAARIAHAHGRE 184
Query: 200 VSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAEL 239
            +  L+    V  +R+  L+L  SG VD+ FAN  EA  L
Sbjct: 185 TAXTLSDSFCVHRYRSEFLELXRSGTVDIVFANRQEALAL 224

>pdb|4E3A|A Chain A, Crystal Structure Of Probable Sugar Kinase Protein From Rhizobium Etli Cfn 42 Length = 352

Iteration: 1
 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 100/247 (40%), Gaps = 19/247 (7%)
Query: 1   MGAEHLIINREASQAALILGLQPAALIDHVARV-DWSLLDQIPGERGGSIPVAIEELEHI 59
           +G E+L          L +G    A++D ++R  D  L+D         I  A   L  I
Sbjct: 13  LGTENLYFQSXTRFDVLTVG---NAIVDIISRCNDQFLIDN-------QITKAAXNL--I 60
Query: 60  LSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFS 119
            +E    +     P    +GGS  NT  G++   G      G    DQ G +F  +++  
Sbjct: 61  DAERAELLYSRXGPALEASGGSAGNTAAGVA-NLGGKAAYFGNVAADQLGDIFTHDIRAQ 119
Query: 120 GVDV-SRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLVLRF 178
           GV   ++ +    PT +    V   G R+    L   V++  +++ A+ V  +K      
Sbjct: 120 GVHYQTKPKGAFPPTARSXIFVTEDGERSXNTYLGACVELGPEDVEADVVADAKVTYFEG 179
Query: 179 GMFN----FEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANED 234
            +++     E I    RIA Q G   S  L+    V  +R   L L  SG VD+ FAN  
Sbjct: 180 YLWDPPRAKEAILDCARIAHQHGREXSXTLSDSFCVDRYRGEFLDLXRSGKVDIVFANRQ 239
Query: 235 EAAELVR 241
           EA  L +
Sbjct: 240 EALSLYQ 246

>pdb|3LOO|A Chain A, Crystal Structure Of Anopheles Gambiae Adenosine Kinase In Complex With P1,P4-Di(Adenosine-5) Tetraphosphate Length = 365

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 102/225 (45%), Gaps = 19/225 (8%)
Query: 26  LIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNT 85
           L+D  A V+  LL++   +   +I   + E +H+        L E    + IAGGSV N+
Sbjct: 33  LLDISAVVEKDLLNKYDMQPNNAI---LAEEKHM---PMYQELIEKYQAEYIAGGSVQNS 86
Query: 86  IRGLSVGFGVPCGLI--GAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDAS 143
           +R        P   I  G  G D+  ++       +GV+V   R    PTG C  LV  +
Sbjct: 87  LRVAQWILQRPRTAIFFGCVGQDEYARILEERATSNGVNVQYQRSATSPTGTCAVLVTGT 146
Query: 144 GNRTMRPCLSNAVKIQADELIAED----VKGSKWLVLRFGMFNFEVIQAAIRIAKQ---E 196
             R++   L+ A     + L ++     ++G+++  +  G F     ++A+ +AK+    
Sbjct: 147 -QRSLCANLAAANDFTPEHLRSDGNRAYLQGAQFFYVS-GFFFTVSFESALSVAKEAAAT 204
Query: 197 GLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR 241
           G    M+L++  + + ++  L ++     VD+ F NE EA  L +
Sbjct: 205 GRMFMMNLSAPFVPQFYKNNLEEIFPY--VDVLFGNETEAIALAK 247

>pdb|3B3L|A Chain A, Crystal Structures Of Alternatively-Spliced Isoforms Of Human Ketohexokinase Length = 298

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 78/170 (45%), Gaps = 19/170 (11%)
Query: 79  GGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMK-RGPTGQCV 137
           GG+ +N+   LS+  G PC  +G+          V++ +  GVDVS++  + +G T    
Sbjct: 40  GGNASNSCTVLSL-LGAPCAFMGSMAPGHVADFLVADFRRRGVDVSQVAWQSKGDTPSSC 98
Query: 138 CLVDAS-GNRTMRPCLSNAVKIQADELIAEDVKGSKWLVLRFGMFNFEVIQAAIRI---- 192
           C+++ S GNRT+    ++   + A +    D+   KW+ +  G    E ++   RI    
Sbjct: 99  CIINNSNGNRTIVLHDTSLPDVSATDFEKVDLTQFKWIHIE-GRNASEQVKMLQRIDAHN 157
Query: 193 ---AKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAEL 239
                ++ + VS++      V   R  L QL   GDV   F ++D A  L
Sbjct: 158 TRQPPEQKIRVSVE------VEKPREELFQLFGYGDV--VFVSKDVAKHL 199

>pdb|3NBV|A Chain A, X-Ray Structure Of Ketohexokinase In Complex With Amp-Pnp And Fructose Length = 313

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 78/170 (45%), Gaps = 19/170 (11%)
Query: 79  GGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMK-RGPTGQCV 137
           GG+ +N+   LS+  G PC  +G+          V++ +  GVDVS++  + +G T    
Sbjct: 55  GGNASNSCTVLSL-LGAPCAFMGSMAPGHVADFLVADFRRRGVDVSQVAWQSKGDTPSSC 113
Query: 138 CLVDAS-GNRTMRPCLSNAVKIQADELIAEDVKGSKWLVLRFGMFNFEVIQAAIRI---- 192
           C+++ S GNRT+    ++   + A +    D+   KW+ +  G    E ++   RI    
Sbjct: 114 CIINNSNGNRTIVLHDTSLPDVSATDFEKVDLTQFKWIHIE-GRNASEQVKMLQRIDAHN 172
Query: 193 ---AKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAEL 239
                ++ + VS++      V   R  L QL   GDV   F ++D A  L
Sbjct: 173 TRQPPEQKIRVSVE------VEKPREELFQLFGYGDV--VFVSKDVAKHL 214

>pdb|1LIO|A Chain A, Structure Of Apo T. Gondii Adenosine Kinase Length = 363

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 92/230 (40%), Gaps = 33/230 (14%)
Query: 26  LIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNT 85
           ++D VA V  S LD+   +RG +  +A  E   I S      LD+ +P  ++ GGS  N+
Sbjct: 22  ILDLVAEVPSSFLDEFFLKRGDAT-LATPEQMRIYS-----TLDQFNPT-SLPGGSALNS 74
Query: 86  IRGLSVGFGVP--CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDAS 143
           +R +      P   G +GA GDD +GQ+        G+    +      TG C  L++  
Sbjct: 75  VRVVQKLLRKPGSAGYMGAIGDDPRGQVLKELCDKEGLATRFMVAPGQSTGTCAVLINEK 134
Query: 144 GNRTMRPCLSNAVKIQADELIAEDVKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSV--- 200
             RT+   L      +    I ED     W     G   F      +    +  L V   
Sbjct: 135 -ERTLCTHLGACGSFR----IPED-----WTTFASGALIFYATAYTLTATPKNALEVAGY 184
Query: 201 ---------SMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR 241
                    +++L++   V  ++  +  LL     ++ F NE+E A L +
Sbjct: 185 AHGIPNAIFTLNLSAPFCVELYKDAMQSLLL--HTNILFGNEEEFAHLAK 232

>pdb|1LII|A Chain A, Structure Of T. Gondii Adenosine Kinase Bound To Adenosine 2 And Amp-Pcp Length = 363

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 54/230 (23%), Positives = 90/230 (39%), Gaps = 33/230 (14%)
Query: 26  LIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNT 85
           ++D VA V  S LD+   +RG +  +A  E   I S      LD+ +P  ++ GGS  N+
Sbjct: 22  ILDLVAEVPSSFLDEFFLKRGDAT-LATPEQMRIYS-----TLDQFNPT-SLPGGSALNS 74
Query: 86  IRGLSVGFGVP--CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDAS 143
           +R +      P   G +GA GDD +GQ+        G+    +      TG C  L++  
Sbjct: 75  VRVVQKLLRKPGSAGYMGAIGDDPRGQVLKELCDKEGLATRFMVAPGQSTGTCAVLINEK 134
Query: 144 GNRTMRPCLSNAVKIQADELIAEDVKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSV--- 200
             RT+   L      +  E          W     G   F      +    +  L V   
Sbjct: 135 -ERTLCTHLGACGSFRIPE---------NWTTFASGALIFYATAYTLTATPKNALEVAGY 184
Query: 201 ---------SMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR 241
                    +++L++   V  ++  +  LL     ++ F NE+E A L +
Sbjct: 185 AHGIPNAIFTLNLSAPFCVELYKDAMQSLLL--HTNILFGNEEEFAHLAK 232

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	241
4e3a_A	352	Sugar kinase protein; structural genomics, protein	1e-64
2abs_A	383	Adenosine kinase, AK; ribokinase fold, alpha/beta,	2e-38
3otx_A	347	Adenosine kinase, putative; AP5A, transferase-tran	4e-38
3loo_A	365	Anopheles gambiae adenosine kinase; AP4A, P4-DI(ad	8e-36
1bx4_A	345	Protein (adenosine kinase); human adenosine kinase	1e-34
2hlz_A	312	Ketohexokinase; non-protein kinase, creatine kinas	8e-26
1vk4_A	298	PFKB carbohydrate kinase TM0415; structural genomi	3e-15
2pkf_A	334	Adenosine kinase; transferase, S genomics, TB stru	4e-15
2c4e_A	302	Sugar kinase MJ0406; transferase, nucleoside kinas	5e-13
1v1a_A	309	2-keto-3-deoxygluconate kinase; ATP, structural ge	6e-13
2qhp_A	296	Fructokinase; NP_810670.1, PFKB family carbohydrat	1e-12
3bf5_A	306	Ribokinase related protein; 10640157, putative rib	2e-12
3iq0_A	330	Putative ribokinase II; transferase,kinase,SAD,rib	2e-12
3h49_A	325	Ribokinase; transferase,PFKB family,sugar kinase Y	3e-12
3go6_A	310	Ribokinase RBSK; phosphofructokinase, carbohydrate	3e-12
2afb_A	351	2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-	8e-12
3ktn_A	346	Carbohydrate kinase, PFKB family; PFKB family,ribo	3e-11
3ljs_A	338	Fructokinase; fructokianse, PSI2, NYSGXRC, structu	5e-11
4du5_A	336	PFKB; structural genomics, PSI-biology, NEW YORK s	6e-11
1tyy_A	339	Putative sugar kinase; ribokinase fold, alpha/beta	6e-11
2qcv_A	332	Putative 5-dehydro-2-deoxygluconokinase; structura	1e-10
3ikh_A	299	Carbohydrate kinase; transferase,kinase,SAD,ribose	2e-10
2nwh_A	317	AGR_C_3442P, carbohydrate kinase; structural genom	3e-10
2rbc_A	343	Sugar kinase, AGR_C_4560P; ribokinase family, ATP-	3e-10
3kd6_A	313	Carbohydrate kinase, PFKB family; nucleoside kinas	5e-10
2dcn_A	311	Hypothetical fructokinase; 2-keto-3-deoxygluconate	6e-10
3pl2_A	319	Sugar kinase, ribokinase family; PFKB PFAM motif,	9e-10
3hj6_A	327	Fructokinase, FRK; fructose, transferase, carbohyd	1e-08
3ewm_A	313	Uncharacterized sugar kinase PH1459; carbohydrate	2e-08
3kzh_A	328	Probable sugar kinase; NYSGXRC, PSI-II, protein st	4e-08
2v78_A	313	Fructokinase; transferase, PFKB family carbohydrat	1e-07
1rkd_A	309	Ribokinase; carbohydrate kinase, ribose, nucleotid	2e-07
2fv7_A	331	Ribokinase; structural genomics, structural genomi	2e-07
3ry7_A	304	Ribokinase; transferase; 2.15A {Staphylococcus aur	3e-07
3b1n_A	326	Ribokinase, putative; rossmann fold, ATP binding,	4e-07
3lhx_A	319	Ketodeoxygluconokinase; structural genomics, PSI-2	2e-06
4e69_A	328	2-dehydro-3-deoxygluconokinase; putative sugar kin	2e-05
1vm7_A	311	Ribokinase; TM0960, structural genomics, JCSG, pro	8e-05

>4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A* Length = 352

 Score =  203 bits (519), Expect = 1e-64
 Identities = 57/220 (25%), Positives = 93/220 (42%), Gaps = 14/220 (6%)

Query: 25  ALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTN 84
           A++D ++R +   L      +     +  E  E + S +         P    +GGS  N
Sbjct: 34  AIVDIISRCNDQFLIDNQITKAAMNLIDAERAELLYSRMG--------PALEASGGSAGN 85

Query: 85  TIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVD-VSRLRMKRGPTGQCVCLVDAS 143
           T  G++   G      G    DQ G +F  +++  GV   ++ +    PT + +  V   
Sbjct: 86  TAAGVA-NLGGKAAYFGNVAADQLGDIFTHDIRAQGVHYQTKPKGAFPPTARSMIFVTED 144

Query: 144 GNRTMRPCLSNAVKIQADELIAEDVKGSKWLVLRFGMF----NFEVIQAAIRIAKQEGLS 199
           G R+M   L   V++  +++ A+ V  +K       ++      E I    RIA Q G  
Sbjct: 145 GERSMNTYLGACVELGPEDVEADVVADAKVTYFEGYLWDPPRAKEAILDCARIAHQHGRE 204

Query: 200 VSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAEL 239
           +SM L+    V  +R   L L+ SG VD+ FAN  EA  L
Sbjct: 205 MSMTLSDSFCVDRYRGEFLDLMRSGKVDIVFANRQEALSL 244

>2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A* Length = 383

 Score =  136 bits (344), Expect = 2e-38
 Identities = 46/222 (20%), Positives = 83/222 (37%), Gaps = 19/222 (8%)

Query: 25  ALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTN 84
            ++D VA V  S LD+   +RG +     E++  I S +            ++ GGS  N
Sbjct: 41  PILDLVAEVPSSFLDEFFLKRGDATLATPEQMR-IYSTLDQF------NPTSLPGGSALN 93

Query: 85  TIRGLS--VGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLV-D 141
           ++R +   +      G +GA GDD +GQ+        G+    +      TG C  L+ +
Sbjct: 94  SVRVVQKLLRKPGSAGYMGAIGDDPRGQVLKELCDKEGLATRFMVAPGQSTGVCAVLINE 153

Query: 142 ASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLVLRFGMFNF----EVIQAAIRIAKQEG 197
               RT+   L      +  E       G+                  ++ A        
Sbjct: 154 --KERTLCTHLGACGSFRLPEDWTTFASGALIFYAT-AYTLTATPKNALEVAGYAHGIPN 210

Query: 198 LSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAEL 239
              +++L++   V  ++  +  LL     ++ F NE+E A L
Sbjct: 211 AIFTLNLSAPFCVELYKDAMQSLLL--HTNILFGNEEEFAHL 250

>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A* Length = 347

 Score =  135 bits (341), Expect = 4e-38
 Identities = 42/225 (18%), Positives = 88/225 (39%), Gaps = 19/225 (8%)

Query: 25  ALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTN 84
            L+D  A V    L +   ERG +I ++ E  + I  +     +++   ++ + GGS  N
Sbjct: 16  PLLDVSAHVSDEFLVKYGLERGTAILLS-ERQKGIFDD-----IEKMPNVRYVPGGSGLN 69

Query: 85  TIRGLS----VGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLV 140
             R          G     +G   DD+ G++     +  G+ ++     +  +G C   +
Sbjct: 70  VARVAQWMQQAYKGKFVTYVGCIADDRYGKVLKEAAEHEGIVMAVEHTTKAGSGACAVCI 129

Query: 141 DASGNRTMRPCLSNAVKIQADEL----IAEDVKGSKWLVLR--FGMFNFEVIQAAIRIAK 194
                RT+   L  A  + ++ +    +   +  S+           +   +  A R A+
Sbjct: 130 T-GKERTLVADLGAANHLSSEHMRSPAVVRAMDESRIFYFSGFTLTVDVNHVLQACRKAR 188

Query: 195 QEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAEL 239
           +      ++L++  +++ F   L ++L     D+  AN  EA E 
Sbjct: 189 EVDGLFMINLSAPFIMQFFSAQLGEVLPY--TDIIVANRHEAKEF 231

>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae} Length = 365

 Score =  129 bits (326), Expect = 8e-36
 Identities = 50/224 (22%), Positives = 95/224 (42%), Gaps = 19/224 (8%)

Query: 25  ALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTN 84
            L+D  A V+  LL++   +   +I    + +      ++ +        + IAGGSV N
Sbjct: 32  PLLDISAVVEKDLLNKYDMQPNNAILAEEKHMPMYQELIEKY------QAEYIAGGSVQN 85

Query: 85  TIRGLS--VGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDA 142
           ++R     +         G  G D+  ++       +GV+V   R    PTG C  LV  
Sbjct: 86  SLRVAQWILQRPRTAIFFGCVGQDEYARILEERATSNGVNVQYQRSATSPTGTCAVLVT- 144

Query: 143 SGNRTMRPCLSNAVKIQADELIAED----VKGSKWLVLRFGMF---NFEVIQAAIRIAKQ 195
              R++   L+ A     + L ++     ++G+++  +  G F   +FE   +  + A  
Sbjct: 145 GTQRSLCANLAAANDFTPEHLRSDGNRAYLQGAQFFYVS-GFFFTVSFESALSVAKEAAA 203

Query: 196 EGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAEL 239
            G    M+L++  + + ++  L ++     VD+ F NE EA  L
Sbjct: 204 TGRMFMMNLSAPFVPQFYKNNLEEIFPY--VDVLFGNETEAIAL 245

>1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A* Length = 345

 Score =  125 bits (316), Expect = 1e-34
 Identities = 42/224 (18%), Positives = 83/224 (37%), Gaps = 17/224 (7%)

Query: 25  ALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTN 84
            L+D  A VD   LD+   +    I    ++ + +  E     L +   ++  AGGS  N
Sbjct: 15  PLLDISAVVDKDFLDKYSLKPNDQILAE-DKHKELFDE-----LVKKFKVEYHAGGSTQN 68

Query: 85  TIRGLSVG---FGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVD 141
           +I+                G  G D+ G++       + VD         PTG C   + 
Sbjct: 69  SIKVAQWMIQQPHKAATFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTCAACIT 128

Query: 142 ASGNRTMRPCLSNAVKIQADELIAED----VKGSKWLVLR--FGMFNFEVIQAAIRIAKQ 195
                 +    +     +   L  E     V+ ++   +   F   + E +      A +
Sbjct: 129 GDNRSLIANLAAANCYKKEKHLDLEKNWMLVEKARVCYIAGFFLTVSPESVLKVAHHASE 188

Query: 196 EGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAEL 239
                +++L++  + + ++  L++++    VD+ F NE EAA  
Sbjct: 189 NNRIFTLNLSAPFISQFYKESLMKVMPY--VDILFGNETEAATF 230

>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A Length = 312

 Score =  101 bits (254), Expect = 8e-26
 Identities = 41/225 (18%), Positives = 79/225 (35%), Gaps = 45/225 (20%)

Query: 24  AALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVT 83
             ++D ++ VD     + P E                   +   L      +   GG+ +
Sbjct: 25  LVVLDVISLVD-----KYPKEDS-----------------EIRCLS----QRWQRGGNAS 58

Query: 84  NTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG--PTGQCVCLVD 141
           N+   LS   G PC  +G+          + +++   VD+     +         V + +
Sbjct: 59  NSCTILS-LLGAPCAFMGSMAPGHVADFVLDDLRRYSVDLRYTVFQTTGSVPIATVIINE 117

Query: 142 ASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLVLR-------FGMFNFEVIQAAIRIAK 194
           ASG+RT+     +   + A +    D+   KW+ +          M    +     R   
Sbjct: 118 ASGSRTILYYDRSLPDVSATDFEKVDLTQFKWIHIEGRNASEQVKMLQR-IDAHNTRQPP 176

Query: 195 QEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAEL 239
           ++ + VS+++         R  L QL   G  D+ F ++D A  L
Sbjct: 177 EQKIRVSVEVE------KPREELFQLF--GYGDVVFVSKDVAKHL 213

>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1 Length = 298

 Score = 72.5 bits (178), Expect = 3e-15
 Identities = 30/173 (17%), Positives = 59/173 (34%), Gaps = 18/173 (10%)

Query: 74  IKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPT 133
            +   GG V       S   GV   +I     +   +   S ++ +GV+V  L  K   T
Sbjct: 31  REIAYGGGVVMGAITSS-LLGVKTKVITKCTREDVSKF--SFLRDNGVEVVFL--KSPRT 85

Query: 134 GQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLVLRFGMFNFEVIQAAIRIA 193
                   +  +      +S A      +L   + +     V    ++  E  +  I + 
Sbjct: 86  TSIENRYGSDPDTRESFLISAADPFTESDLAFIEGE----AVHINPLWYGEFPEDLIPVL 141

Query: 194 KQEGLSVSMDLASF-------EMVRNFRTPLLQLLESGDVDLCFANEDEAAEL 239
           +++ + +S D   F       ++V        + L+   +DL   +  EA  L
Sbjct: 142 RRKVMFLSADAQGFVRVPENEKLVYRDWEMKEKYLK--YLDLFKVDSREAETL 192

>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A* Length = 334

 Score = 72.4 bits (178), Expect = 4e-15
 Identities = 36/214 (16%), Positives = 72/214 (33%), Gaps = 23/214 (10%)

Query: 27  IDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTI 86
            DH+ R      +Q+  E             H +S   + ++D+   +    GG   N  
Sbjct: 21  TDHLMRFPGRFSEQLLPEH-----------LHKVSL--SFLVDD---LVMHRGGVAGNMA 64

Query: 87  RGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGN 145
             + V  G    L+GA G D     +   ++  GV+   + +     T +  C  D    
Sbjct: 65  FAIGV-LGGEVALVGAAGADFAD--YRDWLKARGVNCDHVLISETAHTARFTCTTDVDMA 121

Query: 146 RTMRPCLSNAVKIQADELIAEDVKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLA 205
           +          + +  +L        K  ++  G  + E +       ++ GL+ + D +
Sbjct: 122 QIASFYPGAMSEARNIKLADVVSAIGKPELVIIGANDPEAMFLHTEECRKLGLAFAADPS 181

Query: 206 SFEMVRNFRTPLLQLLESGDVDLCFANEDEAAEL 239
               +       ++ L +G     F N+ E   L
Sbjct: 182 QQ--LARLSGEEIRRLVNG-AAYLFTNDYEWDLL 212

>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A Length = 302

 Score = 66.1 bits (162), Expect = 5e-13
 Identities = 24/168 (14%), Positives = 59/168 (35%), Gaps = 13/168 (7%)

Query: 74  IKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-P 132
            +   GG+  NT  G+    GV   L+   G D +   +   ++   +++S+L       
Sbjct: 37  ARKYYGGAAANTAVGIKK-LGVNSELLSCVGYDFKNSGYERYLKNLDINISKLYYSEEEE 95

Query: 133 TGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLVLRFGMFNFEVIQAAIRI 192
           T +     D   N+        A   +       +   ++ + +          +  ++ 
Sbjct: 96  TPKAWIFTDKDNNQITFFLWGAAKHYKELNPPNFN---TEIVHI-----ATGDPEFNLKC 147

Query: 193 AKQEGLSVSMDLA-SFEMVRNFRTPLLQLLESGDVDLCFANEDEAAEL 239
           AK+   +  +      ++ +  +  LL+++E    +  F N+ E    
Sbjct: 148 AKKAYGNNLVSFDPGQDLPQYSKEMLLEIIE--HTNFLFMNKHEFERA 193

>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A Length = 309

 Score = 66.0 bits (162), Expect = 6e-13
 Identities = 44/187 (23%), Positives = 70/187 (37%), Gaps = 41/187 (21%)

Query: 78  AGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCV 137
            GG+  N    L+   GV  G +G  G+D+ G +    ++  GVD++  R   G TG  +
Sbjct: 32  VGGAEVNVAVALAR-LGVKVGFVGRVGEDELGAMVEERLRAEGVDLTHFRRAPGFTGLYL 90

Query: 138 CLVDASGNRT---MRPCLSNAVKIQADELIAEDVKGSKWLVL-----------RFGMFNF 183
                 G       R   S    +       + ++G ++L L           R      
Sbjct: 91  REYLPLGQGRVFYYRKG-SAGSALAPGAFDPDYLEGVRFLHLSGITPALSPEAR------ 143

Query: 184 EVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPL----------LQLLESGDVDLCFANE 233
                A+  AK+ G+ VS+D+       N+R  L           + L    VDL F +E
Sbjct: 144 AFSLWAMEEAKRRGVRVSLDV-------NYRQTLWSPEEARGFLERALP--GVDLLFLSE 194

Query: 234 DEAAELV 240
           +EA  L 
Sbjct: 195 EEAELLF 201

>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Length = 296

 Score = 64.9 bits (159), Expect = 1e-12
 Identities = 24/176 (13%), Positives = 53/176 (30%), Gaps = 27/176 (15%)

Query: 78  AGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCV 137
            GG+  N    +S  FG    ++ A G+D+ G   +   +   +     R+   PTG   
Sbjct: 23  IGGAPANFAYHVS-QFGFDSRVVSAVGNDELGDEIMEVFKEKQLKNQIERVDY-PTGTVQ 80

Query: 138 CLVDASGNRT---MRPCLSNAVKIQADELIAEDVKGSKWLV-----LRFGMFNFEVIQAA 189
             +D  G                I   + +      ++ +       R  +    + +  
Sbjct: 81  VTLDDEGVPCYEIKEG--VAWDNIPFTDELKRLALNTRAVCFGSLAQRNEVSRATINRFL 138

Query: 190 IRIAKQEGLSVSMDLASFEMVRNFRTPL------LQLLESGDVDLCFANEDEAAEL 239
             +   +G     D+       N R          +  +    ++   N++E   +
Sbjct: 139 DTMPDIDGQLKIFDI-------NLRQDFYTKEVLRESFKR--CNILKINDEELVTI 185

>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728} Length = 306

 Score = 64.2 bits (157), Expect = 2e-12
 Identities = 23/195 (11%), Positives = 56/195 (28%), Gaps = 24/195 (12%)

Query: 47  GSIPV-AIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGD 105
           G + +  +  ++ I  E   ++ D    ++   GG+  N        F +P  L  A G 
Sbjct: 27  GHLNIDVLISVDSIPREGSVNVKD----LRPRFGGTAGNFAIVAQK-FRIPFDLYSAVGM 81

Query: 106 DQQGQLFVSNMQFSGVDVSRLRMKRGP-TGQCVCLVDASGNRTMRPCLSNAVKIQADELI 164
               +  ++ ++  G++   +          C    D     +       A         
Sbjct: 82  KTHREY-LAMIESMGINTGHVEKFEDESGPICYIATDGKKQVSF--MHQGA----MAAWA 134

Query: 165 AEDVKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESG 224
            +     +++               + +AK     +  D +      + +  L +  E  
Sbjct: 135 PQLADEYEYVHF-------STGPNYLDMAKSIRSKIIFDPSQEIHKYS-KDELKKFHEI- 185

Query: 225 DVDLCFANEDEAAEL 239
              +   N+ E    
Sbjct: 186 -SYMSIFNDHEYRVF 199

>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} PDB: 3k9e_A Length = 330

 Score = 64.1 bits (157), Expect = 2e-12
 Identities = 37/193 (19%), Positives = 63/193 (32%), Gaps = 37/193 (19%)

Query: 69  DEPSPIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRM 128
                      G+    I  ++   GVPCG+I   G+D  G + +  +   GVD+  + +
Sbjct: 27  QPGIWNGPYPSGAPAIFIDQVTR-LGVPCGIISCVGNDGFGDINIHRLAADGVDIRGISV 85

Query: 129 KRG-PTGQCVCLVDASGNRT---MRPCLSNAVKIQADELIAEDVKGSKWLVL-------- 176
                TG        SG+R         +   K+ A  +    +K      +        
Sbjct: 86  LPLEATGSAFVTYHNSGDRDFIFNIKN-AACGKLSAQHVDENILKDCTHFHIMGSSLFSF 144

Query: 177 --RFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGD--------V 226
                    + ++ A+ I K  G  +S D        N R  +L + E  D         
Sbjct: 145 HMV------DAVKKAVTIVKANGGVISFDP-------NIRKEMLDIPEMRDALHFVLELT 191

Query: 227 DLCFANEDEAAEL 239
           D+   +E E   L
Sbjct: 192 DIYMPSEGEVLLL 204

>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A* Length = 325

 Score = 64.2 bits (157), Expect = 3e-12
 Identities = 38/197 (19%), Positives = 68/197 (34%), Gaps = 21/197 (10%)

Query: 53  IEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLF 112
           ++ +   + +V ++ L+    I    GG   N    +S   G    L+   G D  GQ  
Sbjct: 20  LQPVSKNIFDVDSYPLER---IAMTTGGDAINEATIIS-RLGHRTALMSRIGKDAAGQFI 75

Query: 113 VSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTM---RPCLSNAVKIQADELIAEDV 168
           + + +   +D+  L+      T   V LV   G RT    R    +  K+  D++     
Sbjct: 76  LDHCRKENIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRN--GSLWKLNIDDVDFARF 133

Query: 169 KGSKWL----VLRFGMFNFEVIQAAIRIAKQEGLSVSMDL--ASFEMVRNFRTPLLQLLE 222
             +K L    +    + + + +      AK   + +  D+         +     L    
Sbjct: 134 SQAKLLSLASIFNSPLLDGKALTEIFTQAKARQMIICADMIKPRLNETLDDICEALSY-- 191

Query: 223 SGDVDLCFANEDEAAEL 239
              VD  F N  EA  L
Sbjct: 192 ---VDYLFPNFAEAKLL 205

>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A* Length = 310

 Score = 63.8 bits (156), Expect = 3e-12
 Identities = 32/156 (20%), Positives = 55/156 (35%), Gaps = 29/156 (18%)

Query: 94  GVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASG--------- 144
           G      GA+GDD       ++++ + V + R     GP+G  + +VDAS          
Sbjct: 70  GAQVQFSGAFGDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPG 129

Query: 145 -NRTMRPCLSNAVKIQADELIAEDVKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMD 203
            N  + P             +A        L+ +  +       AA R A+     V ++
Sbjct: 130 ANAHLTP---------VPSAVAN----CDVLLTQLEI-PVATALAAARAAQSADAVVMVN 175

Query: 204 LASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAEL 239
            +     R+    L  +      D+  ANE EA + 
Sbjct: 176 ASPAGQDRSSLQDLAAI-----ADVVIANEHEANDW 206

>2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1 Length = 351

 Score = 63.1 bits (154), Expect = 8e-12
 Identities = 33/183 (18%), Positives = 71/183 (38%), Gaps = 33/183 (18%)

Query: 78  AGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCV 137
            GG+  N    L+   G+    +    ++  G     +++  GV    +       G   
Sbjct: 43  YGGAEANVAAFLA-QMGLDAYFVTKLPNNPLGDAAAGHLRKFGVKTDYIARGGNRIGIYF 101

Query: 138 CLVDASGNRTM----RPCLSNAVKIQADELIAEDV-KGSKWLVLRFGMF------NFEVI 186
             + AS   +     R   S   + + ++   E +  G++W     G+          ++
Sbjct: 102 LEIGASQRPSKVVYDRAH-SAISEAKREDFDWEKILDGARWFHFS-GITPPLGKELPLIL 159

Query: 187 QAAIRIAKQEGLSVSMDLASFEMVRNFRTPL----------LQLLESGDVDLCFANEDEA 236
           + A+++A ++G++VS DL       N+R  L          +  +E   VD+  ANE++ 
Sbjct: 160 EDALKVANEKGVTVSCDL-------NYRARLWTKEEAQKVMIPFMEY--VDVLIANEEDI 210

Query: 237 AEL 239
            ++
Sbjct: 211 EKV 213

>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis} Length = 346

 Score = 61.2 bits (149), Expect = 3e-11
 Identities = 25/179 (13%), Positives = 51/179 (28%), Gaps = 21/179 (11%)

Query: 78  AGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCV 137
             G+  N +  L+  F +   LI     ++ G+   + ++  G+    +  K    G   
Sbjct: 33  FVGTGVNLLANLA-HFQLETALITKLPANRLGEAGKAALRKLGISDQWVGEKGDHIGSFF 91

Query: 138 CLVDASGNRTMRPCL----SNAVKIQADELIAEDV-KGSKWLVLRFGMF------NFEVI 186
             +      T         S     +A +   E        + +  G+         +  
Sbjct: 92  AEMGYGIRPTQVTYQNRHQSAFGISEAKDYDFEAFLAEVDMVHIC-GISLSLTEKTRDAA 150

Query: 187 QAAIRIAKQEGLSVSMD------LASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAEL 239
               + A      V  D      L +       R    ++L     D+ F +  +  EL
Sbjct: 151 LILAQKAHAYQKKVCFDFNYRPSLNTANSALFMRQQYERILP--YCDIVFGSRRDLVEL 207

>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} PDB: 3lki_A* Length = 338

 Score = 60.3 bits (147), Expect = 5e-11
 Identities = 36/181 (19%), Positives = 57/181 (31%), Gaps = 30/181 (16%)

Query: 78  AGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRM-KRGPTGQC 136
           AGG+  N    ++   G     +G  G D  G     +   +GV    +       T   
Sbjct: 35  AGGAPANVAVAVA-RLGGAVQFVGMLGSDMFGDFLFDSFAEAGVVTDGIVRTSTAKTALA 93

Query: 137 VCLVDASGNRT---MRPCLSNAVKIQADELIAEDVKGSKWLVLRFG---MFNF---EVIQ 187
              +DA G R+    RP  +  +  + +         +           M +    EV  
Sbjct: 94  FVALDAHGERSFSFYRPP-AADLLFRVEHFQDASFSDALIFH--ACSNSMTDADIAEVTF 150

Query: 188 AAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLES---------GDVDLCFANEDEAAE 238
             +R A+  G  VS DL       NFR  L    E+            D+   + +E   
Sbjct: 151 EGMRRAQAAGAIVSFDL-------NFRPMLWPNGENPASRLWKGLSLADVVKLSSEELDY 203

Query: 239 L 239
           L
Sbjct: 204 L 204

>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP} Length = 336

 Score = 60.3 bits (147), Expect = 6e-11
 Identities = 36/183 (19%), Positives = 57/183 (31%), Gaps = 30/183 (16%)

Query: 78  AGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTG-Q 135
             G+ TN   GL+   G+  G     G D  G+  ++ M   G+D S +       TG Q
Sbjct: 57  TAGAETNVAIGLAR-LGLKVGWASRLGTDSMGRYLLAAMAAEGIDCSHVVCDATQKTGFQ 115

Query: 136 CVCLVDASGNRT---MRPCLSNAVKIQADELIAEDVKGSKWLVLRFGMF------NFEVI 186
               V    +      R   S A  +   ++    +  ++ L    G+F           
Sbjct: 116 FKGKVTDGSDPPVEYHRKG-SAASHMGVADIDEAWLLSARHLHA-TGVFPAISATTLPAA 173

Query: 187 QAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLES---------GDVDLCFANEDEAA 237
           +  + + +  G SVS D        N R  L    E             D      +E  
Sbjct: 174 RKTMDLMRAAGRSVSFDP-------NLRPTLWATPELMRDAINDLATRADWVLPGMEEGR 226

Query: 238 ELV 240
            L 
Sbjct: 227 FLT 229

>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A* Length = 339

 Score = 60.3 bits (147), Expect = 6e-11
 Identities = 38/190 (20%), Positives = 68/190 (35%), Gaps = 30/190 (15%)

Query: 69  DEPSPIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRM 128
           ++ +      GG+  N    ++   G  CG IG  GDD  G+      Q +GVDV+ LR+
Sbjct: 40  EKQNSYLKCPGGASANVGVCVA-RLGGECGFIGCLGDDDAGRFLRQVFQDNGVDVTFLRL 98

Query: 129 -KRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAED----VKGSKWLVL-RFGMFN 182
                +   +  + A G R+     +  V   AD  ++       +  +W      G+ +
Sbjct: 99  DADLTSAVLIVNLTADGERS----FTYLVHPGADTYVSPQDLPPFRQYEWFYFSSIGLTD 154

Query: 183 F---EVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLES---------GDVDLCF 230
               E      R  ++ G  V  D+       N R+ +    +              +C 
Sbjct: 155 RPAREACLEGARRMREAGGYVLFDV-------NLRSKMWGNTDEIPELIARSAALASICK 207

Query: 231 ANEDEAAELV 240
            + DE  +L 
Sbjct: 208 VSADELCQLS 217

>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125} Length = 332

 Score = 59.5 bits (145), Expect = 1e-10
 Identities = 42/187 (22%), Positives = 69/187 (36%), Gaps = 39/187 (20%)

Query: 78  AGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRM--KRGPTGQ 135
            GGS  N + G S   G+  G IG   DDQ G+   S M+  GVD S L +  +   TG 
Sbjct: 43  VGGSPANIVIGSSK-LGLKAGFIGKIADDQHGRFIESYMRGVGVDTSNLVVDQEGHKTGL 101

Query: 136 CVCLVDASGNRT---MRPCLSNAVKIQADELIAEDVKGSKWLVL----------RFGMFN 182
               + +    +    R      + +  +E+    ++ SK L++          R     
Sbjct: 102 AFTEIKSPEECSILMYRQD-VADLYLSPEEVNEAYIRRSKLLLVSGTALSKSPSR----- 155

Query: 183 FEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLES---------GDVDLCFANE 233
            E +  AIR+AK+  + V  +L       ++R    +  E             D+     
Sbjct: 156 -EAVLKAIRLAKRNDVKVVFEL-------DYRPYSWETPEETAVYYSLVAEQSDIVIGTR 207

Query: 234 DEAAELV 240
           +E   L 
Sbjct: 208 EEFDVLE 214

>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A* Length = 299

 Score = 58.3 bits (142), Expect = 2e-10
 Identities = 24/158 (15%), Positives = 46/158 (29%), Gaps = 31/158 (19%)

Query: 94  GVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASG--------- 144
           G+   LI A G+D  G      ++   + +         +   + L  A G         
Sbjct: 53  GIETRLIAATGNDSNGAWIRQQIKNEPLMLLPDGHFNQHSDTSIILNSADGDNAIITTTA 112

Query: 145 -NRTMRPCLSNAVKIQADELIAEDVKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMD 203
              T          I               L+ +   F+ +  +A  + A+  G++   +
Sbjct: 113 AADTFSL----DEMIPHMADAVA----GDILLQQGN-FSLDKTRALFQYARSRGMTTVFN 163

Query: 204 LASFEMVRNFRTPLLQLLES--GDVDLCFANEDEAAEL 239
            +          P+          +D+   NE EA  L
Sbjct: 164 PS----------PVNPDFCHLWPLIDIAVVNESEAELL 191

>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str} Length = 317

 Score = 58.4 bits (142), Expect = 3e-10
 Identities = 28/156 (17%), Positives = 51/156 (32%), Gaps = 22/156 (14%)

Query: 94  GVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRT-----M 148
           G    +I   G D  G++     + +GV+ +        T     +++  GN       M
Sbjct: 53  GFEVRIIAPRGGDVTGEVVAEAARQAGVEDTPFTFLDRRTPSYTAILERDGNLVIALADM 112

Query: 149 RPCLSNAVKIQADELIAEDVKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDL---- 204
                   +      + E +  S +L+    +   + + A   IA+     ++       
Sbjct: 113 DLYKLFTPRRLKVRAVREAIIASDFLLCDANL-PEDTLTALGLIARACEKPLAAIAISPA 171

Query: 205 -ASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAEL 239
            A           L   L   D+D+ F NE EA  L
Sbjct: 172 KAV---------KLKAALG--DIDILFMNEAEARAL 196

>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str} Length = 343

 Score = 58.4 bits (142), Expect = 3e-10
 Identities = 28/148 (18%), Positives = 53/148 (35%), Gaps = 12/148 (8%)

Query: 94  GVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCL 152
           G    L GA GDD+ G   + ++  SG+D S + +  G  +     ++D  G R + P  
Sbjct: 80  GGRASLWGAVGDDETGTRILRDLSESGIDTSGMTVAPGARSALSTIIIDNRGERLIVPFY 139

Query: 153 SNAVKIQADELIAEDVKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRN 212
            + +  +      ED+     +++       E+    + +A+  G    +D         
Sbjct: 140 DHRLHEKKRACTPEDIALFDAVLVDVRW--PELALDVLTVARALGKPAILDGDV------ 191

Query: 213 FRTPLLQ-LLESGDVDLCFANEDEAAEL 239
                L+ L           +E  A  L
Sbjct: 192 APVETLEGLAP--AATHIVFSEPAATRL 217

>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum} Length = 313

 Score = 57.5 bits (139), Expect = 5e-10
 Identities = 31/166 (18%), Positives = 56/166 (33%), Gaps = 8/166 (4%)

Query: 75  KTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRM-KRGPT 133
               GGS T      S     P  ++G  G D  G+     +    +D   +++ + G T
Sbjct: 24  DNTLGGSSTYIALSASYFTDEPIRMVGVVGSD-FGKEHFDLLHAKNIDTRGIQVIEDGKT 82

Query: 134 GQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLVLRFGMFNFEVIQAAIRIA 193
            +         N          V  + D  + +  + SK++ L  G  + E+    +   
Sbjct: 83  FRWAGRYHYDMNTRDTLDTQLNVFAEFDPHVPQYYRDSKFVCL--GNIDPELQLKVLDQI 140

Query: 194 KQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAEL 239
               L V   +     +      L ++L    VD+   N+ EA  L
Sbjct: 141 DDPKLVVCDTM--NFWIEGKPEELKKVLA--RVDVFIVNDSEARLL 182

>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A* Length = 311

 Score = 57.2 bits (139), Expect = 6e-10
 Identities = 35/180 (19%), Positives = 62/180 (34%), Gaps = 26/180 (14%)

Query: 78  AGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQC 136
             GS  N         G  CG+I   GDD+ G   +  ++  GVDVS +++    PTG  
Sbjct: 32  VAGSEANYCVAFI-KQGNECGIIAKVGDDEFGYNAIEWLRGQGVDVSHMKIDPSAPTGIF 90

Query: 137 VCLVDASGNRTMRPCL-----SNAVKIQADELIAEDVKGSKWLVLR-FGMFNFEVIQAAI 190
                          +     S   K+  +++  E VK +  +      +      + A+
Sbjct: 91  FIQRHYPVPLK-SESIYYRKGSAGSKLSPEDVDEEYVKSADLVHSSGITLAISSTAKEAV 149

Query: 191 RIAKQEGLSVSMDLASFEMVRNFRTPL----------LQLLESGDVDLCFANEDEAAELV 240
             A +   + S D        N R  L          L+LL    +     + D++  ++
Sbjct: 150 YKAFEIASNRSFDT-------NIRLKLWSAEEAKREILKLLSKFHLKFLITDTDDSKIIL 202

>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} Length = 319

 Score = 56.8 bits (138), Expect = 9e-10
 Identities = 28/179 (15%), Positives = 56/179 (31%), Gaps = 24/179 (13%)

Query: 78  AGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRM-KRGPTGQC 136
            GGS  N     +   G    L+   G+D  G+  ++ ++  GVD   +   +   T   
Sbjct: 40  LGGSAANVSVAAAR-HGHNSALLSRVGNDPFGEYLLAELERLGVDNQYVATDQTFKTPVT 98

Query: 137 VCLVDASGNRT---MRPCLSNAVKIQADELIAEDVKGSKWLVL---RFGMFNFEVIQAAI 190
            C +    +      R   +  + I++ ++  +DV+ +  L      F           I
Sbjct: 99  FCEIFPPDDFPLYFYREPKAPDLNIESADVSLDDVREADILWFTLTGFSEEPSRGTHREI 158

Query: 191 RIAKQEGLSVSMDLASFEMVRNFRTPLLQLLES---------GDVDLCFANEDEAAELV 240
              +        DL       ++R    +  E              +   N++E    V
Sbjct: 159 LTTRANRRHTIFDL-------DYRPMFWESPEEATKQAEWALQHSTVAVGNKEECEIAV 210

>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii} Length = 327

 Score = 53.3 bits (129), Expect = 1e-08
 Identities = 35/184 (19%), Positives = 56/184 (30%), Gaps = 37/184 (20%)

Query: 78  AGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRM-KRGPTGQC 136
            GGS  N    LS   G    LI   G D  G   +  ++   +    ++  K   T   
Sbjct: 53  FGGSPANIAVNLSR-LGKKVALISRLGADAFGNYLLDVLKGEQIITDGIQQDKERRTTIV 111

Query: 137 VC-LVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLVL----------RFGMFNFEV 185
                  + +          + +Q D++I E +K SK   L          R      + 
Sbjct: 112 YVSKSTRTPDWLPYR--EADMYLQEDDIIFELIKRSKVFHLSTFILSRKPAR------DT 163

Query: 186 IQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGD---------VDLCFANEDEA 236
              A   A+++G  V  D         +R  L    + G           D    + D+A
Sbjct: 164 AIKAFNYAREQGKIVCFDP-------CYRKVLWPEGDDGAGVVEEIISRADFVKPSLDDA 216

Query: 237 AELV 240
             L 
Sbjct: 217 RHLF 220

>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A* Length = 313

 Score = 53.0 bits (128), Expect = 2e-08
 Identities = 33/185 (17%), Positives = 62/185 (33%), Gaps = 40/185 (21%)

Query: 78  AGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRM-KRGPTGQC 136
            GG+  N   G+S   GV   LI   G+D  G+  +  +    VD   +   ++  TG  
Sbjct: 32  PGGAPANVAVGVSR-LGVKSSLISKVGNDPFGEYLIEELSKENVDTRGIVKDEKKHTGIV 90

Query: 137 VCLVDASGNRTM--RPCLSNAVKIQADELIAEDVKGSKWLVL----------RFGMFNFE 184
              +  +    +           +  +++  + V+ +K +            R      E
Sbjct: 91  FVQLKGASPSFLLYDD--VAYFNMTLNDINWDIVEEAKIVNFGSVILARNPSR------E 142

Query: 185 VIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLES----------GDVDLCFANED 234
            +   I+  K   L ++ D+       N R  L +  E              D+  A+E+
Sbjct: 143 TVMKVIKKIKGSSL-IAFDV-------NLRLDLWRGQEEEMIKVLEESIKLADIVKASEE 194

Query: 235 EAAEL 239
           E   L
Sbjct: 195 EVLYL 199

>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens} Length = 328

 Score = 51.8 bits (125), Expect = 4e-08
 Identities = 23/150 (15%), Positives = 54/150 (36%), Gaps = 13/150 (8%)

Query: 94  GVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASG-NRTMRPC 151
           GV    +   G+D+ G+  V + +  G  +    +  G  T   + ++D +G   +    
Sbjct: 56  GVNTNFMSILGNDEHGKSIVEHSKKIGYHMDDSMVIEGGSTPTYLAILDENGEMVSAIAD 115

Query: 152 LSNAVKIQADEL--IAEDVKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEM 209
           + +   +  D +    E  + +++ VL     +   I   +    ++  +  +D  S   
Sbjct: 116 MKSIGAMNTDFIDSKREIFENAEYTVLD---SDNPEIMEYLLKNFKDKTNFILDPVS-AE 171

Query: 210 VRNFRTPLLQLLESGDVDLCFANEDEAAEL 239
             ++   L++            N  EA  L
Sbjct: 172 KASWVKHLIKD-----FHTIKPNRHEAEIL 196

>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A* Length = 313

 Score = 50.2 bits (121), Expect = 1e-07
 Identities = 33/186 (17%), Positives = 65/186 (34%), Gaps = 37/186 (19%)

Query: 78  AGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQC 136
             GS  N    +     + C LI   G+D+ G+  +   +  G+D S +++     TG  
Sbjct: 32  VAGSELNFCIAVV-RNHLSCSLIARVGNDEFGKNIIEYSRAQGIDTSHIKVDNESFTGIY 90

Query: 137 VC--LVDASGNRTM----RPCLSNAVKIQADELIAEDVKGSKWLV-----LRFGMFNFEV 185
                        +    +   S   ++  +++    V+ S+ +      L       E 
Sbjct: 91  FIQRGYPIPMKSELVYYRKG--SAGSRLSPEDINENYVRNSRLVHSTGITLAISDNAKEA 148

Query: 186 IQAAIRIAKQEGLSVSMDLASFEMVRNFRTPL-----------LQLLESGDVDLCFANED 234
           +  A  +AK    S S+D        N R  L           L +L+  D+++   + D
Sbjct: 149 VIKAFELAK----SRSLDT-------NIRPKLWSSLEKAKETILSILKKYDIEVLITDPD 197

Query: 235 EAAELV 240
           +   L+
Sbjct: 198 DTKILL 203

>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A* Length = 309

 Score = 49.8 bits (120), Expect = 2e-07
 Identities = 36/156 (23%), Positives = 57/156 (36%), Gaps = 26/156 (16%)

Query: 94  GVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCL 152
           G     I   GDD  G+     +    +D++ + + +G  TG  +  V+  G        
Sbjct: 55  GANIAFIACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFVNGEGE------- 107

Query: 153 SNAVKIQA---DELIAEDVKGSKWLVLRFGMF------NFEVIQAAIRIAKQEGLSVSMD 203
            N + I A     L    V+  +  +              E + AA +IA Q    V+++
Sbjct: 108 -NVIGIHAGANAALSPALVEAQRERIANASALLMQLESPLESVMAAAKIAHQNKTIVALN 166

Query: 204 LASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAEL 239
            A     R     LL L     VD+   NE EA +L
Sbjct: 167 PAP---ARELPDELLAL-----VDIITPNETEAEKL 194

>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1 Length = 331

 Score = 49.5 bits (119), Expect = 2e-07
 Identities = 26/157 (16%), Positives = 53/157 (33%), Gaps = 27/157 (17%)

Query: 94  GVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRL-RMKRGPTGQCVCLVDASG-------- 144
           G    ++   G D  G  ++ N++ + +      + K   TG    +V+  G        
Sbjct: 75  GAMTSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTASIIVNNEGQNIIVIVA 134

Query: 145 --NRTMRPCLSNAVKIQADELIAEDVKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSM 202
             N  +           A  +I+     +K +V +  +        A+ +A++ G+    
Sbjct: 135 GANLLLNT----EDLRAAANVISR----AKVMVCQLEI-TPATSLEALTMARRSGVKTLF 185

Query: 203 DLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAEL 239
           + A    + +       L      D+   NE EA  L
Sbjct: 186 NPAPA--IADLDPQFYTL-----SDVFCCNESEAEIL 215

>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus} Length = 304

 Score = 49.0 bits (118), Expect = 3e-07
 Identities = 32/156 (20%), Positives = 54/156 (34%), Gaps = 26/156 (16%)

Query: 94  GVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRL-RMKRGPTGQCVCLVDASGNRTMRPCL 152
                 I   G D      + + + + +D S + +     TGQ    V+A G        
Sbjct: 54  QADTTFITKIGTDGVADFILEDFKVAHIDTSYIIKTAEAKTGQAFITVNAEGQ------- 106

Query: 153 SNAVKIQA---DELIAEDVKGSKWLVLRFGMF------NFEVIQAAIRIAKQEGLSVSMD 203
            N + +       +  EDV  +K  ++               I +A  IAK  G++  ++
Sbjct: 107 -NTIYVYGGANMTMTPEDVINAKDAIINADFVVAQLEVPIPAIISAFEIAKAHGVTTVLN 165

Query: 204 LASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAEL 239
            A     +     LL L     +D+   NE EA  L
Sbjct: 166 PAP---AKALPNELLSL-----IDIIVPNETEAELL 193

>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A* Length = 326

 Score = 48.8 bits (117), Expect = 4e-07
 Identities = 24/147 (16%), Positives = 47/147 (31%), Gaps = 9/147 (6%)

Query: 94  GVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCL 152
           G    ++G  G     Q ++  M   G+    +R+     + Q +   D   N+      
Sbjct: 61  GGDARMMGTLGAVD-AQPYLDRMDALGLSREYVRVLPDTYSAQAMITTDLDNNQIT--AF 117

Query: 153 SNAVKIQADELIAEDVKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRN 212
                +Q+    A + K  K  ++  G   F+ +        Q G+    D     +   
Sbjct: 118 HPGAMMQSHVNHAGEAKDIKLAIV--GPDGFQGMVQHTEELAQAGVPFIFDPGQG-LPLF 174

Query: 213 FRTPLLQLLESGDVDLCFANEDEAAEL 239
               L + +E         N+ EA  +
Sbjct: 175 DGATLRRSIEL--ATYIAVNDYEAKLV 199

>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri} Length = 319

 Score = 47.2 bits (113), Expect = 2e-06
 Identities = 42/195 (21%), Positives = 63/195 (32%), Gaps = 49/195 (25%)

Query: 78  AGGSVTNTIRGLS---VGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRL-RMKRGPT 133
            GG   NT   ++       +    + A G D   Q  +       VD S   RM+    
Sbjct: 28  FGGDTLNTSVYIARQVDPAALTVHYVTALGTDSFSQQMLDAWHGENVDTSLTQRMENRLP 87

Query: 134 GQCVCLVDASGNRT---MRPCLSNAVKIQADEL---IAEDVKGSKWLVL----------- 176
           G      D++G RT    R   + A    A E    I E++    +L L           
Sbjct: 88  GLYYIETDSTGERTFYYWRNE-AAAKFWLASEQSAAICEELANFDYLYLSGISLAILSPT 146

Query: 177 -RFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPL-----------LQLLESG 224
            R      E + + +R  + +G  V  D        N+R  L            Q+LE  
Sbjct: 147 SR------EKLLSLLRECRAKGGKVIFDN-------NYRPRLWASKEETQQVYQQMLEC- 192

Query: 225 DVDLCFANEDEAAEL 239
             D+ F   D+   L
Sbjct: 193 -TDIAFLTLDDEDAL 206

>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A* Length = 328

 Score = 43.4 bits (103), Expect = 2e-05
 Identities = 32/189 (16%), Positives = 55/189 (29%), Gaps = 42/189 (22%)

Query: 78  AGGSVTNTIRGLS-VGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRL-RMKRGPTG- 134
             G   NT   L+ +          A GDD   Q   + M  +G+D   L  +     G 
Sbjct: 49  FAGDTFNTAWYLARLRPESRISYFSAIGDDALSQQMRAAMSAAGIDGGGLRVIPGRTVGL 108

Query: 135 QCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLVLRFGMFNF----------- 183
             + L    G R+     +      A   +A D       + R  +  F           
Sbjct: 109 YLITLEQ--GERSF----AYWRGQSAARELAGDADALAAAMARADVVYFSGITLAILDQC 162

Query: 184 --EVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPL-----------LQLLESGDVDLCF 230
               +  A+  A+  G +++ D        N R  L           +Q       D+  
Sbjct: 163 GRATLLRALAQARATGRTIAFDP-------NLRPRLWAGTGEMTETIMQGAAV--SDIAL 213

Query: 231 ANEDEAAEL 239
            + ++ A  
Sbjct: 214 PSFEDEAAW 222

>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1 Length = 311

 Score = 41.7 bits (99), Expect = 8e-05
 Identities = 27/150 (18%), Positives = 49/150 (32%), Gaps = 32/150 (21%)

Query: 99  LIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAV-- 156
            +   G+D    L + N +  G+          PTG+    VD +G         N +  
Sbjct: 71  FVTCIGNDDYSDLLIENYEKLGITGYIR--VSLPTGRAFIEVDKTGQ--------NRIII 120

Query: 157 ------KIQADELIAEDVKGSKWLVLRFGMFNFEV-IQAAIRIAKQEGLSVSMDLASFEM 209
                 +++ + +    +  S  L+L       E+  +  +  AK+    V  D A    
Sbjct: 121 FPGANAELKKELIDWNTLSESDILLL-----QNEIPFETTLECAKRFNGIVIFDPAP--- 172

Query: 210 VRNFRTPLLQLLESGDVDLCFANEDEAAEL 239
            +     + Q      +D    NE E   L
Sbjct: 173 AQGINEEIFQY-----LDYLTPNEKEIEAL 197

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	241
4e3a_A	352	Sugar kinase protein; structural genomics, protein	100.0
3uq6_A	372	Adenosine kinase, putative; ribokinase, transferas	100.0
3otx_A	347	Adenosine kinase, putative; AP5A, transferase-tran	100.0
3vas_A	370	Putative adenosine kinase; ribokinase, enzyme, tra	100.0
3loo_A	365	Anopheles gambiae adenosine kinase; AP4A, P4-DI(ad	100.0
3go6_A	310	Ribokinase RBSK; phosphofructokinase, carbohydrate	99.97
1bx4_A	345	Protein (adenosine kinase); human adenosine kinase	99.97
2abs_A	383	Adenosine kinase, AK; ribokinase fold, alpha/beta,	99.97
2rbc_A	343	Sugar kinase, AGR_C_4560P; ribokinase family, ATP-	99.97
3ikh_A	299	Carbohydrate kinase; transferase,kinase,SAD,ribose	99.96
3ry7_A	304	Ribokinase; transferase; 2.15A {Staphylococcus aur	99.96
3ljs_A	338	Fructokinase; fructokianse, PSI2, NYSGXRC, structu	99.96
1rkd_A	309	Ribokinase; carbohydrate kinase, ribose, nucleotid	99.96
3hj6_A	327	Fructokinase, FRK; fructose, transferase, carbohyd	99.96
2fv7_A	331	Ribokinase; structural genomics, structural genomi	99.96
2c4e_A	302	Sugar kinase MJ0406; transferase, nucleoside kinas	99.96
4du5_A	336	PFKB; structural genomics, PSI-biology, NEW YORK s	99.96
2nwh_A	317	AGR_C_3442P, carbohydrate kinase; structural genom	99.95
3kzh_A	328	Probable sugar kinase; NYSGXRC, PSI-II, protein st	99.95
2hlz_A	312	Ketohexokinase; non-protein kinase, creatine kinas	99.95
3h49_A	325	Ribokinase; transferase,PFKB family,sugar kinase Y	99.95
1vm7_A	311	Ribokinase; TM0960, structural genomics, JCSG, pro	99.95
3ktn_A	346	Carbohydrate kinase, PFKB family; PFKB family,ribo	99.95
3pl2_A	319	Sugar kinase, ribokinase family; PFKB PFAM motif,	99.95
1v1a_A	309	2-keto-3-deoxygluconate kinase; ATP, structural ge	99.95
3lhx_A	319	Ketodeoxygluconokinase; structural genomics, PSI-2	99.95
2qcv_A	332	Putative 5-dehydro-2-deoxygluconokinase; structura	99.94
3ewm_A	313	Uncharacterized sugar kinase PH1459; carbohydrate	99.94
4e69_A	328	2-dehydro-3-deoxygluconokinase; putative sugar kin	99.94
3iq0_A	330	Putative ribokinase II; transferase,kinase,SAD,rib	99.94
3ie7_A	320	LIN2199 protein; phosphofructokinases, transferase	99.94
3b1n_A	326	Ribokinase, putative; rossmann fold, ATP binding,	99.94
1tyy_A	339	Putative sugar kinase; ribokinase fold, alpha/beta	99.94
2pkf_A	334	Adenosine kinase; transferase, S genomics, TB stru	99.94
3bf5_A	306	Ribokinase related protein; 10640157, putative rib	99.94
4gm6_A	351	PFKB family carbohydrate kinase; enzyme function i	99.93
3umo_A	309	6-phosphofructokinase isozyme 2; glycolysis, trans	99.93
3cqd_A	309	6-phosphofructokinase isozyme 2; phosphofructokina	99.93
2v78_A	313	Fructokinase; transferase, PFKB family carbohydrat	99.93
2dcn_A	311	Hypothetical fructokinase; 2-keto-3-deoxygluconate	99.92
2ajr_A	331	Sugar kinase, PFKB family; TM0828, possible 1-phos	99.92
2f02_A	323	Tagatose-6-phosphate kinase; LACC, structural geno	99.92
2jg1_A	330	Tagatose-6-phosphate kinase; phosphoryl transfer,	99.92
4e84_A	352	D-beta-D-heptose 7-phosphate kinase; LPS-heptose b	99.91
2qhp_A	296	Fructokinase; NP_810670.1, PFKB family carbohydrat	99.91
2abq_A	306	Fructose 1-phosphate kinase; dimer, structural gen	99.91
2afb_A	351	2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-	99.9
2jg5_A	306	Fructose 1-phosphate kinase; 1-phosphofructokinase	99.9
3kd6_A	313	Carbohydrate kinase, PFKB family; nucleoside kinas	99.88
1vk4_A	298	PFKB carbohydrate kinase TM0415; structural genomi	99.85
2yxt_A	312	Pyridoxal kinase; beta sheet with alpha helix, met	98.89
2ddm_A	283	Pyridoxine kinase; pyridoxal kinase, ribokinase, p	98.48
1jxh_A	288	Phosphomethylpyrimidine kinase; THID, ribokinase f	97.89
3drw_A	474	ADP-specific phosphofructokinase; AMP, GLYC kinase	97.82
1ua4_A	455	Glucokinase, ADP-dependent glucokinase; transferas	97.36
1gc5_A	467	ADP-dependent glucokinase; ALFA/beta sandwichs, in	97.32
1l2l_A	457	ADP-dependent glucokinase; ADP glucokinase APO, tr	97.27
1ekq_A	272	Hydroxyethylthiazole kinase; alpha-beta, transfera	97.21
3zs7_A	300	Pyridoxal kinase; transferase, sleeping sickness;	97.16
2i5b_A	271	Phosphomethylpyrimidine kinase; ADP complex, PDXK,	97.1
1ub0_A	258	THID, phosphomethylpyrimidine kinase; thiamin bios	97.09
3mbh_A	291	Putative phosphomethylpyrimidine kinase; structura	96.98
3h74_A	282	Pyridoxal kinase; PSI-II, structural genomics, pro	96.78
3pzs_A	289	PM kinase, pyridoxamine kinase; structural genomic	96.57
1v8a_A	265	Hydroxyethylthiazole kinase; alpha-beta, ATP bindi	96.42
3dzv_A	273	4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_	96.28
3nl6_A	540	Thiamine biosynthetic bifunctional enzyme; thiamin	95.75
3hpd_A	265	Hydroxyethylthiazole kinase; alpha-beta, ATP bindi	95.29
3rm5_A	550	Hydroxymethylpyrimidine/phosphomethylpyrimidine K	94.9
3rss_A	502	Putative uncharacterized protein; unknown function	93.63
3rpz_A	279	ADP/ATP-dependent NAD(P)H-hydrate dehydratase; str	93.37
2r3b_A	310	YJEF-related protein; putative kinase in the ribok	92.83
3bgk_A	311	SMU.573, putative uncharacterized protein; alpha/b	90.64

>4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A*

Probab=100.00  E-value=2.1e-35  Score=254.42  Aligned_cols=228  Identities=27%  Similarity=0.383  Sum_probs=194.3

Q ss_pred             CcccceeecccCCCCeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCCh
Q 026265            2 GAEHLIINREASQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGS   81 (241)
Q Consensus         2 ~~~~~~~~~~~~~~~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~   81 (241)
                      |-|+|+-+.  -+.++|+++| ++++|+++.+++.+++++.+++|++++++.+....++.++.        +....+||+
T Consensus        14 ~~~~~~~~~--m~~~~v~~iG-~~~vD~~~~v~~~~l~~~~l~~g~~~li~~~~~~~l~~~~~--------~~~~~~GG~   82 (352)
T 4e3a_A           14 GTENLYFQS--MTRFDVLTVG-NAIVDIISRCNDQFLIDNQITKAAMNLIDAERAELLYSRMG--------PALEASGGS   82 (352)
T ss_dssp             -----------CCSEEEEEEC-CCEEEEEEECCHHHHHHTTCCTTSEEECCHHHHHHHHHHSC--------SCEEEECCH
T ss_pred             CccccCHhH--CCcccEEEEC-CceeeEEEecCHHHHHHcCCCCCcceEeCHHHHHHHHHHhh--------hccEecCCH
Confidence            556653332  1348999999 99999999999999999999999999999999999998754        567899999


Q ss_pred             HHHHHHHHHhhcCCceeEEeeecCChhHHHHHHHHHhCCceeeceeecCC-CceeEEEEEcCCCCeeeeeCccccCCCCc
Q 026265           82 VTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNAVKIQA  160 (241)
Q Consensus        82 ~~N~a~~la~~LG~~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~-~T~~~~~~~~~~g~r~~~~~~g~~~~l~~  160 (241)
                      ++|+|++++ +||.++.++|.+|+|.+|+++++.|++.||+++++.+.++ +|+.|+++++++|+|+++.+.++...+++
T Consensus        83 ~~N~A~~la-~LG~~~~~ig~vG~D~~G~~l~~~l~~~GV~~~~~~~~~~~~T~~~~v~v~~~g~r~~~~~~ga~~~l~~  161 (352)
T 4e3a_A           83 AGNTAAGVA-NLGGKAAYFGNVAADQLGDIFTHDIRAQGVHYQTKPKGAFPPTARSMIFVTEDGERSMNTYLGACVELGP  161 (352)
T ss_dssp             HHHHHHHHH-HHTCCEEEECCCCSSHHHHHHHHHHHHTTCEECCCCCCSSSCCEEEEEEECTTSCEEEEEECGGGGGCCG
T ss_pred             HHHHHHHHH-HcCCCeEEEEEECCChHHHHHHHHHHHcCCccceeeccCCCCCeEEEEEEcCCCceEEEeccChhhcCCh
Confidence            999999999 8999999999999999999999999999999999887655 89999999998999999988998889999


Q ss_pred             ccCChhhhCCccEEEEE-ecc---ccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHH
Q 026265          161 DELIAEDVKGSKWLVLR-FGM---FNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEA  236 (241)
Q Consensus       161 ~~~~~~~i~~~~~v~~~-~~~---~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea  236 (241)
                      +++..+.+++++++|++ +.+   .+.+.+.++++.+++.|+++++|++++.+.+.+++.+.++++..++|++++|++|+
T Consensus       162 ~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~l~~ll~~~~~dil~~N~~Ea  241 (352)
T 4e3a_A          162 EDVEADVVADAKVTYFEGYLWDPPRAKEAILDCARIAHQHGREMSMTLSDSFCVDRYRGEFLDLMRSGKVDIVFANRQEA  241 (352)
T ss_dssp             GGCCHHHHHTEEEEEEEGGGGSSSSHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHTTSCCEEEEEHHHH
T ss_pred             hhCCHHHHhhCCEEEEeeeecCCchHHHHHHHHHHHHHHcCCEEEEECCchhhHHHHHHHHHHHhcccCCcEEEeCHHHH
Confidence            99988889999999999 432   13578889999999999999999987765555667777777522699999999999


Q ss_pred             HhhhC
Q 026265          237 AELVR  241 (241)
Q Consensus       237 ~~l~g  241 (241)
                      +.|+|
T Consensus       242 ~~l~g  246 (352)
T 4e3a_A          242 LSLYQ  246 (352)
T ss_dssp             HHHTT
T ss_pred             HHHhC
Confidence            99875

>3uq6_A Adenosine kinase, putative; ribokinase, transferase; HET: ADN AMP; 2.30A {Schistosoma mansoni} PDB: 3uq9_A*

Probab=100.00  E-value=1.8e-35  Score=256.56  Aligned_cols=216  Identities=17%  Similarity=0.231  Sum_probs=187.8

Q ss_pred             CCeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcC
Q 026265           15 AALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFG   94 (241)
Q Consensus        15 ~~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG   94 (241)
                      +..|++|| |++||+++.++++||+++.+++|.+++++ ++...++.++...     .+....+||+++|+|++++ +||
T Consensus        26 ~~~v~giG-nalvDi~~~v~d~~l~~~~l~kg~m~l~~-~~~~~~~~~~~~~-----~~~~~~~GGsa~N~a~~la-~LG   97 (372)
T 3uq6_A           26 EGYVFGMG-NPLLDIIVDADDFMYRKYNLKKDNIVLAE-EKHMTIYDEIQKK-----KKLNYIAGGATLNTVKMIQ-WII   97 (372)
T ss_dssp             TTCEEEEE-CCEEEEEEECCTHHHHHTTCCTTEEEECC-GGGTTHHHHHHTS-----SSCEEEECCHHHHHHHHHH-HHH
T ss_pred             CCeEEEEC-CceeeEEEEeCHHHHHHcCCCCCceEEcC-HHHHHHHHHHhcc-----CCeEEeCCcHHHHHHHHHH-HcC
Confidence            45699999 99999999999999999999999999988 4445566555422     3678899999999999999 899


Q ss_pred             Cc---eeEEeeecCChhHHHHHHHHHhCCceeeceeecCC-CceeEEEEEcCCCCeeeeeCccccCCCCcccCCh----h
Q 026265           95 VP---CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA----E  166 (241)
Q Consensus        95 ~~---~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~-~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~~----~  166 (241)
                      .+   +.|+|.||+|.+|+++++.|++.||++.++...++ +|+.|+++++ +|+|+++++.++...+++++++.    +
T Consensus        98 ~~~~~~~fiG~VG~D~~G~~l~~~L~~~GV~~~~~~~~~~~~T~~~~v~~~-dgert~~~~~ga~~~l~~~~i~~~~~~~  176 (372)
T 3uq6_A           98 QKPFVCSYVGCIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVS-EKLRSMVTYLGAACDLSLAHIEQPHVWS  176 (372)
T ss_dssp             CSTTSEEEEEEECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEEC-SSCEEEEEEEEGGGGCCHHHHTSHHHHH
T ss_pred             CCCCcEEEEeeecCCHHHHHHHHHHHHcCCCceeeeecCCCCceEEEEEcC-CCceEEEEeccchhhcchhhhhhhhHHH
Confidence            65   99999999999999999999999999998887766 7999999886 89999999999999999888763    4


Q ss_pred             hhCCccEEEEE-ecc-ccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          167 DVKGSKWLVLR-FGM-FNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       167 ~i~~~~~v~~~-~~~-~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      .++.++++|++ |.+ .+.+.+.++++.+++.|++++||++++.+++.+++.+.++++  ++|++++|++|++.|++
T Consensus       177 ~i~~a~~~~~~g~~~~~~~~~~~~~~~~a~~~g~~v~ldls~~~~~~~~~~~l~~ll~--~~Dil~~Ne~Ea~~l~~  251 (372)
T 3uq6_A          177 LVEKAQVYYIAGFVINTCYEGMLKIAKHSLENEKLFCFNLSAPFLSQFNTKEVDEMIS--YSNIVFGNESEAEAYGE  251 (372)
T ss_dssp             HHHHCSEEEEEGGGHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHHT--TCSEEEEEHHHHHHHHH
T ss_pred             HhhcccEEEEecccccccHHHHHHHHHHHHHcCCeEeeccccchhhhhhHHHHHHHhh--cCCcccCCHHHHHHHhC
Confidence            67899999999 433 235778899999999999999999988877778888999998  99999999999998863

>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A*

Probab=100.00  E-value=8e-34  Score=243.91  Aligned_cols=217  Identities=19%  Similarity=0.287  Sum_probs=186.0

Q ss_pred             CCCeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhc
Q 026265           14 QAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGF   93 (241)
Q Consensus        14 ~~~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~L   93 (241)
                      +..+|+++| ++++|+++.++++|++++++++|.+.+++ ++....+.++.     ........+||+++|+|++++ +|
T Consensus         6 ~~~~v~~iG-~~~lD~~~~v~~~~l~~~~l~~g~~~l~~-~~~~p~~~~~~-----~~~~~~~~~GG~~~N~a~~la-~L   77 (347)
T 3otx_A            6 APLRVYVQC-NPLLDVSAHVSDEFLVKYGLERGTAILLS-ERQKGIFDDIE-----KMPNVRYVPGGSGLNVARVAQ-WM   77 (347)
T ss_dssp             CCCCEEEEC-CCEEEEEEECCHHHHHHTTCCTTCEEECC-GGGTTHHHHHH-----TSTTCEEEECCHHHHHHHHHH-HT
T ss_pred             CCCcEEEEC-CceeeEEEecCHHHHHHcCCCCCceEEcC-HHHHHHHHHHh-----ccCCeEEecCCHHHHHHHHHH-Hh
Confidence            567899999 99999999999999999999999999988 33323333322     123788999999999999999 89


Q ss_pred             ----CCc-eeEEeeecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEEEcCCCCeeeeeCccccCCCCcccCCh---
Q 026265           94 ----GVP-CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA---  165 (241)
Q Consensus        94 ----G~~-~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~~---  165 (241)
                          |.+ +.++|.+|+|.+|+++++.|++.||+++++...+.+|++|+++++ +|+|+++.+.++...+++++++.   
T Consensus        78 ~~~~G~~~~~~ig~vG~D~~g~~~~~~l~~~GV~~~~~~~~~~~T~~~~i~~~-~g~r~~~~~~ga~~~~~~~~~~~~~~  156 (347)
T 3otx_A           78 QQAYKGKFVTYVGCIADDRYGKVLKEAAEHEGIVMAVEHTTKAGSGACAVCIT-GKERTLVADLGAANHLSSEHMRSPAV  156 (347)
T ss_dssp             TGGGTTSSEEEECEECSSHHHHHHHHHHHHHTCEECCEECSSSCEEEEEEEEE-TTEEEEEEEEEGGGGCCHHHHTSHHH
T ss_pred             cccCCCCeEEEEEEecCChHHHHHHHHHHHCCCceecccCCCCCCeEEEEEEE-CCceeeeechhhhhcCCHHHcCchhh
Confidence                999 999999999999999999999999999998755558999999998 89999998889888898888763   


Q ss_pred             -hhhCCccEEEEE-ecc-ccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          166 -EDVKGSKWLVLR-FGM-FNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       166 -~~i~~~~~v~~~-~~~-~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                       +.+++++++|++ +.. .+++.+.++++.+++.|+++++|++.+...+.+++.+.++++  ++|++++|++|++.|+|
T Consensus       157 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~l~~~l~--~~dil~~N~~Ea~~l~~  233 (347)
T 3otx_A          157 VRAMDESRIFYFSGFTLTVDVNHVLQACRKAREVDGLFMINLSAPFIMQFFSAQLGEVLP--YTDIIVANRHEAKEFAN  233 (347)
T ss_dssp             HHHHHHCSEEEEEGGGGGTCHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHGG--GCSEEEEEHHHHHHHHH
T ss_pred             HHHHhhCCEEEEeeeecccCHHHHHHHHHHHHHhCCEEEeeCchhhhHHHHHHHHHHHHh--hCCEEecCHHHHHHHhc
Confidence             568899999999 432 467889999999999999999999876555556778888998  99999999999998863

>3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A*

Probab=100.00  E-value=1.9e-33  Score=243.68  Aligned_cols=216  Identities=16%  Similarity=0.220  Sum_probs=184.3

Q ss_pred             CCeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhc-
Q 026265           15 AALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGF-   93 (241)
Q Consensus        15 ~~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~L-   93 (241)
                      ..+|+++| ++++|+++.++++||+++++++|...+++. +......+..     ........+||+++|+|++++ +| 
T Consensus        24 ~~~v~~iG-~~~vD~~~~v~~~~l~~~~l~~g~~~l~~~-~~~P~~ge~~-----~~~~~~~~~GG~~~N~A~~la-~L~   95 (370)
T 3vas_A           24 EGYVFGMG-NPLLDIIVDADDFMYRKYNLKKDNIVLAEE-KHMTIYDEIQ-----KKKKLNYIAGGATLNTVKMIQ-WII   95 (370)
T ss_dssp             TTCEEEEE-CCEEEEEEECCTHHHHHTTCCTTEEEECCG-GGTHHHHHHT-----TSSSCEEEEECHHHHHHHHHH-HHH
T ss_pred             CccEEEEC-CcceeEEEecCHHHHHHcCCCCCceEEccH-HHHHHHHHHh-----hcCCeEEecCCHHHHHHHHHH-Hhc
Confidence            47899999 999999999999999999999999999863 2222222221     124788999999999999999 89 


Q ss_pred             --CCceeEEeeecCChhHHHHHHHHHhCCceeeceee-cCCCceeEEEEEcCCCCeeeeeCccccCCCCcccCCh----h
Q 026265           94 --GVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRM-KRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA----E  166 (241)
Q Consensus        94 --G~~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~-~~~~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~~----~  166 (241)
                        |.++.++|.+|+|.+|+++++.|++.||++.++.+ .+.+|++|+++++ +|+|+++.+.+++..+++++++.    +
T Consensus        96 ~~G~~~~~ig~vG~D~~G~~~~~~L~~~GV~~~~~~~~~~~~Tg~~~i~v~-~g~rt~~~~~ga~~~l~~~~~~~~~~~~  174 (370)
T 3vas_A           96 QKPFVCSYVGCIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVS-EKLRSMVTYLGAACDLSLAHIEQPHVWS  174 (370)
T ss_dssp             CCTTCEEEEEEECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEEC-SSCEEEEEEEEGGGGCCHHHHTSHHHHH
T ss_pred             CCCCcEEEEEEEcCChhHHHHHHHHHHcCCcccccccCCCCCceEEEEEEe-CCceeEEEccchhhhCCHHHcCchhhHH
Confidence              99999999999999999999999999999999887 4458999999998 89999998899888899888764    5


Q ss_pred             hhCCccEEEEE-ecc-ccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          167 DVKGSKWLVLR-FGM-FNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       167 ~i~~~~~v~~~-~~~-~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      .+++++++|++ +.. .+++.+.++++.+++.|+++++|++++...+.+++.+.++++  ++|++++|++|++.|+|
T Consensus       175 ~~~~~~~v~~~g~~~~~~~~~~~~~~~~a~~~g~~v~ld~~~~~~~~~~~~~l~~ll~--~~dil~~N~~Ea~~l~g  249 (370)
T 3vas_A          175 LVEKAQVYYIAGFVINTCYEGMLKIAKHSLENEKLFCFNLSAPFLSQFNTKEVDEMIS--YSNIVFGNESEAEAYGE  249 (370)
T ss_dssp             HHHHCSEEEEEGGGHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHHT--TCSEEEEEHHHHHHHHH
T ss_pred             HHhhCCEEEEEeeeccCCHHHHHHHHHHHHHcCCEEEEECCcHHHHHHHHHHHHHHHh--hCCEEEcCHHHHHHHhc
Confidence            68899999999 432 356788999999999999999999866544456677888888  99999999999998864

>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae}

Probab=100.00  E-value=1.2e-32  Score=238.17  Aligned_cols=216  Identities=25%  Similarity=0.371  Sum_probs=181.4

Q ss_pred             CCeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhc-
Q 026265           15 AALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGF-   93 (241)
Q Consensus        15 ~~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~L-   93 (241)
                      .++|+++| ++++|+++.+++.||+++++++|...+.+ +....++.++..     .......+||+++|+|++++ +| 
T Consensus        23 ~~~v~~iG-~~~vD~~~~v~~~~l~~~~l~~g~~~l~~-~~~~p~~~e~~~-----~~~~~~~~GG~~~N~a~~~~-~L~   94 (365)
T 3loo_A           23 DGMLVGLG-NPLLDISAVVEKDLLNKYDMQPNNAILAE-EKHMPMYQELIE-----KYQAEYIAGGSVQNSLRVAQ-WIL   94 (365)
T ss_dssp             TTSEEEEC-CCEEEEEEECCHHHHHHTTCCSSEEEECC-GGGTHHHHHHHH-----HHCCEEEEECHHHHHHHHHH-HHH
T ss_pred             CccEEEEC-CCeEeEEEecCHHHHHHcCCCCCCceech-hHHHHHHHHHhh-----cCCeEEecCCHHHHHHHHHH-Hhh
Confidence            46799999 99999999999999999999999998854 222222222110     02578999999999999998 67 


Q ss_pred             --CCceeEEeeecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEEEcCCCCeeeeeCccccCCCCcccCCh----hh
Q 026265           94 --GVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA----ED  167 (241)
Q Consensus        94 --G~~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~~----~~  167 (241)
                        |.++.++|.+|+|.+|+++++.|++.||++.++.+.+.+|++|+++++ +|+|+++.+.++...+++++++.    +.
T Consensus        95 ~lG~~~~~ig~vG~D~~g~~~~~~l~~~GV~~~~~~~~~~~Tg~~~i~~~-~~~r~~~~~~ga~~~~~~~~~~~~~~~~~  173 (365)
T 3loo_A           95 QRPRTAIFFGCVGQDEYARILEERATSNGVNVQYQRSATSPTGTCAVLVT-GTQRSLCANLAAANDFTPEHLRSDGNRAY  173 (365)
T ss_dssp             TCTTSEEEEEEEESBHHHHHHHHHHHHHTCEEEEEEESSSCCEEEEEEEE-TTEEEEEEECGGGGGCCGGGGGSHHHHHH
T ss_pred             cCCCcEEEEEEecCCchHHHHHHHHHHCCCceeccccCCCCCeEEEEEEE-CCceEEEeccchHhhCCHhHcCchhhHHH
Confidence              999999999999999999999999999999998885458999999998 78999998899888899888763    56


Q ss_pred             hCCccEEEEE-ecc-ccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          168 VKGSKWLVLR-FGM-FNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       168 i~~~~~v~~~-~~~-~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      +++++++|++ +.+ .+++.+.++++.+++.|+++++|++++...+..++.+.++++  ++|++++|++|++.|+|
T Consensus       174 ~~~~~~v~i~G~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~l~~~l~--~~dil~~N~~Ea~~l~g  247 (365)
T 3loo_A          174 LQGAQFFYVSGFFFTVSFESALSVAKEAAATGRMFMMNLSAPFVPQFYKNNLEEIFP--YVDVLFGNETEAIALAK  247 (365)
T ss_dssp             HHHCSEEEEEGGGHHHHHHHHHHHHHHHHHTTCEEEEECCSTHHHHHCHHHHHHHGG--GCSEEEEEHHHHHHHHH
T ss_pred             HhhCCEEEEeeeeccCCHHHHHHHHHHHHHcCCEEEEECCchhhhHHHHHHHHHHHH--hCCEEecCHHHHHHHhc
Confidence            8899999999 432 356788999999999999999999866544566777888898  99999999999998863

>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A*

Probab=99.97  E-value=1.4e-30  Score=220.54  Aligned_cols=198  Identities=21%  Similarity=0.281  Sum_probs=162.3

Q ss_pred             eeecccCCCCeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHH
Q 026265            7 IINREASQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTI   86 (241)
Q Consensus         7 ~~~~~~~~~~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a   86 (241)
                      +++...++..+|+++| ++++|+++.+     +++|.+ |...                    ........+||+++|+|
T Consensus        11 ~~~~~~~mm~~i~viG-~~~iD~~~~v-----~~~p~~-g~~~--------------------~~~~~~~~~GG~~~NvA   63 (310)
T 3go6_A           11 SETNVGPMAPRVCVVG-SVNMDLTFVV-----DALPRP-GETV--------------------LAASLTRTPGGKGANQA   63 (310)
T ss_dssp             --------CCEEEEEC-CCEEEEEEEC-----SSCCCT-TCCC--------------------CCSEEEEEEECHHHHHH
T ss_pred             hhhccccccCCEEEEC-CceEEEEEec-----CCCCCC-CCeE--------------------EecceeecCCCHHHHHH
Confidence            3444445678999999 9999999998     566533 2211                    12367899999999999


Q ss_pred             HHHHhhcCCceeEEeeecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEEEcCCCCeeeeeCccccCCCCcccCChh
Q 026265           87 RGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAE  166 (241)
Q Consensus        87 ~~la~~LG~~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~~~  166 (241)
                      ++|+ +||.++.++|.+|+|.+|+++++.|++.||+++++...+.+|+.++++++++|+|+++.++++...++  ++ .+
T Consensus        64 ~~la-~LG~~~~~i~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~l~--~~-~~  139 (310)
T 3go6_A           64 VAAA-RAGAQVQFSGAFGDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLT--PV-PS  139 (310)
T ss_dssp             HHHH-HTTCEEEEECEECSSHHHHHHHHHHHHTTCBCTTCEECSSCCEEEEEEECTTSCEEEEEECGGGGGCC--CC-TT
T ss_pred             HHHH-HCCCCeEEEEEECCCHHHHHHHHHHHHcCCccceeEecCCCCCEEEEEEcCCCCEEEEecCChhhhHH--HH-HH
Confidence            9999 89999999999999999999999999999999999776669999999999889999998888777676  44 45


Q ss_pred             hhCCccEEEEEeccccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          167 DVKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       167 ~i~~~~~v~~~~~~~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      .+++++++|++.. .+.+.+.++++.+++.|++++||+++..   ..++.+.++++  ++|++++|++|++.|+|
T Consensus       140 ~l~~~~~v~~~~~-~~~~~~~~~~~~a~~~g~~v~~D~~~~~---~~~~~~~~ll~--~~dil~~N~~Ea~~l~g  208 (310)
T 3go6_A          140 AVANCDVLLTQLE-IPVATALAAARAAQSADAVVMVNASPAG---QDRSSLQDLAA--IADVVIANEHEANDWPS  208 (310)
T ss_dssp             TTTTCSEEEECSS-SCHHHHHHHHHHHHHTTCEEEEECCSSS---CCHHHHHHHHH--HCSEEEEEHHHHHHSSS
T ss_pred             HhhcCCEEEECCC-CCHHHHHHHHHHHHHcCCEEEEcCCccc---cchHHHHHHHh--hCCEEEeCHHHHHHHhC
Confidence            7889999999954 3778899999999999999999998653   34566667787  99999999999999875

>1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A*

Probab=99.97  E-value=1.6e-29  Score=216.94  Aligned_cols=213  Identities=22%  Similarity=0.287  Sum_probs=174.7

Q ss_pred             CCCeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHH----HHHHhHhhccccCCCCCCCceeecCChHHHHHHHH
Q 026265           14 QAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIE----ELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGL   89 (241)
Q Consensus        14 ~~~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~----~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~l   89 (241)
                      +..+|+++| ++++|+++.++..++.++++.+|...+++..    ..+.+..          ......+||+++|+|+++
T Consensus         5 ~~~~v~viG-~~~~D~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~----------~~~~~~~GG~~~NvA~~l   73 (345)
T 1bx4_A            5 RENILFGMG-NPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKK----------FKVEYHAGGSTQNSIKVA   73 (345)
T ss_dssp             CTTCEEEEC-CCEEEEEEECCHHHHHHTTCCSSEEEECCGGGHHHHHHHHHH----------SCCEEEEECHHHHHHHHH
T ss_pred             ccccEEEEC-CcceeEEEecCHHHHHHcCCCCCcEEEchHHHHHHHHHHhcc----------CCceecCCcHHHHHHHHH
Confidence            456899999 9999999999988888999998887765311    1111211          268899999999999999


Q ss_pred             HhhcC----CceeEEeeecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEEEcCCCCeeeeeCccccCCCCcc-cCC
Q 026265           90 SVGFG----VPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQAD-ELI  164 (241)
Q Consensus        90 a~~LG----~~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~-~~~  164 (241)
                      + +||    .++.|+|.+|+|.+|+++++.|++.||++.++...+.+|+.++++++ +|+|+++.+.++...++++ +++
T Consensus        74 a-~lgg~~~~~~~~ig~vG~D~~G~~i~~~L~~~gv~~~~v~~~~~~T~~~~~~~~-~g~r~~~~~~~a~~~~~~~~~~~  151 (345)
T 1bx4_A           74 Q-WMIQQPHKAATFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTCAACIT-GDNRSLIANLAAANCYKKEKHLD  151 (345)
T ss_dssp             H-HHHCSSTTCEEEEEEEESSHHHHHHHHHHHHTTCEEEEEEESSSCCCEEEEEEE-TTEEEEEEECGGGGGCCGGGTTT
T ss_pred             H-HhcCCCCCcEEEEEEeCCChhHHHHHHHHHHcCCceeeeecCCCCCceEEEEEc-CCceEeeeccchHhhcCcccccC
Confidence            9 896    99999999999999999999999999999998765558999999997 7889888788887788888 776


Q ss_pred             ----hhhhCCccEEEEE-ecc-ccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHh
Q 026265          165 ----AEDVKGSKWLVLR-FGM-FNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAE  238 (241)
Q Consensus       165 ----~~~i~~~~~v~~~-~~~-~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~  238 (241)
                          .+.+++++++|++ +.. .+.+.+.++++.+++.|+++++|+++....+..++.+.++++  ++|++++|++|++.
T Consensus       152 ~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~~~~~l~--~~dil~~N~~E~~~  229 (345)
T 1bx4_A          152 LEKNWMLVEKARVCYIAGFFLTVSPESVLKVAHHASENNRIFTLNLSAPFISQFYKESLMKVMP--YVDILFGNETEAAT  229 (345)
T ss_dssp             SHHHHHHHHHCSEEEEEGGGGGTCHHHHHHHHHHHHHTTCEEEEECCSHHHHHHTHHHHHHHGG--GCSEEEEEHHHHHH
T ss_pred             cHHHHHHHhhCCEEEEEEEeccCCHHHHHHHHHHHHHcCCEEEEeCCcHHHHHHHHHHHHHHhc--cCCEEeCCHHHHHH
Confidence                2457889999998 422 467888999999999999999999865322334556677888  99999999999998


Q ss_pred             hhC
Q 026265          239 LVR  241 (241)
Q Consensus       239 l~g  241 (241)
                      |+|
T Consensus       230 l~g  232 (345)
T 1bx4_A          230 FAR  232 (345)
T ss_dssp             HHH
T ss_pred             Hhc
Confidence            853

>2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A*

Probab=99.97  E-value=4e-29  Score=217.45  Aligned_cols=217  Identities=21%  Similarity=0.296  Sum_probs=173.3

Q ss_pred             CCCCeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhh
Q 026265           13 SQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVG   92 (241)
Q Consensus        13 ~~~~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~   92 (241)
                      +++.+|+++| ++++|+++.++..++.++++..|....++ ++...++.++.      .......+||+++|+|++++ +
T Consensus        30 ~~~~~vlviG-~~~lD~~~~~~~~~~~~~~~~~g~~~~~~-~~~~p~~~~~~------~~~~~~~~GG~~~NvA~~la-~  100 (383)
T 2abs_A           30 TGPMRVFAIG-NPILDLVAEVPSSFLDEFFLKRGDATLAT-PEQMRIYSTLD------QFNPTSLPGGSALNSVRVVQ-K  100 (383)
T ss_dssp             CCCCCEEEEC-CCEEEEEEECCHHHHHHTTCCTTCEEECC-GGGGGGGGTGG------GGCCEEEEESHHHHHHHHHH-H
T ss_pred             CCCceEEEEC-cchheeEeccCHHHHHhcCCCCCceeech-hhHHHHHHhhc------cccceeeCCChHHHHHHHHH-H
Confidence            4457899999 99999999998767778877777765543 22122221110      13678899999999999999 8


Q ss_pred             c---CCceeEEeeecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEEEcCCCCeeeeeCccccCCCCcccCChhhhC
Q 026265           93 F---GVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVK  169 (241)
Q Consensus        93 L---G~~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~~~~i~  169 (241)
                      |   |.++.|+|.+|+|.+|+++++.|++.||++.++...+.+|+.++++++ +|+|+++.+.++...+++++...+.++
T Consensus       101 Lg~~g~~v~~ig~vG~D~~G~~i~~~L~~~GV~~~~v~~~~~~T~~~~~~~~-~g~r~~~~~~~a~~~l~~~~~~~~~l~  179 (383)
T 2abs_A          101 LLRKPGSAGYMGAIGDDPRGQVLKELCDKEGLATRFMVAPGQSTGVCAVLIN-EKERTLCTHLGACGSFRLPEDWTTFAS  179 (383)
T ss_dssp             HHCSTTSEEEEEEECSSHHHHHHHHHHHHHTCEEEEEECTTCCCEEEEEEEE-TTEEEEEEECGGGGGCCCCTTHHHHTT
T ss_pred             hccCCCcEEEEEEecCChhHHHHHHHHHHcCCceeeeecCCCCCeEEEEEEc-CCceeEeeccChhhhCChhhhhHHHhh
Confidence            9   899999999999999999999999999999988754458999999997 789988878888777777644445688


Q ss_pred             CccEEEEE-ecc-ccHHHHHHHHHHHHH-CCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          170 GSKWLVLR-FGM-FNFEVIQAAIRIAKQ-EGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       170 ~~~~v~~~-~~~-~~~~~~~~~~~~a~~-~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      +++++|++ +.. .+.+.+.++++.+++ .|+++++|+++....+.+++.+.++++  ++|++++|++|++.|+|
T Consensus       180 ~~~~v~~~g~~~~~~~~~~~~~~~~a~~~~g~~v~~d~~~~~~~~~~~~~l~~ll~--~~dil~pN~~Ea~~L~g  252 (383)
T 2abs_A          180 GALIFYATAYTLTATPKNALEVAGYAHGIPNAIFTLNLSAPFCVELYKDAMQSLLL--HTNILFGNEEEFAHLAK  252 (383)
T ss_dssp             TCCEEEEEGGGGTTCHHHHHHHHHHHHTSTTCEEEEECCCHHHHHHCHHHHHHHHH--TCSEEEEEHHHHHHHHH
T ss_pred             cCCEEEEeeecccCCHHHHHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHHHHHHHh--hCCEEeCCHHHHHHHhc
Confidence            99999998 332 467888999999998 899999999865433344566777888  99999999999998853

>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str}

Probab=99.97  E-value=5.8e-29  Score=213.42  Aligned_cols=189  Identities=21%  Similarity=0.310  Sum_probs=158.7

Q ss_pred             CCeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcC
Q 026265           15 AALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFG   94 (241)
Q Consensus        15 ~~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG   94 (241)
                      ..+|+++| ++++|+++.+     +++|.+.+. .                    ........+||+++|+|++++ +||
T Consensus        29 ~~~i~viG-~~~iD~~~~~-----~~~p~~~~~-~--------------------~~~~~~~~~GG~~~NvA~~la-~LG   80 (343)
T 2rbc_A           29 GKHVLCVG-AAVLDTLFRV-----ADMPKGEGK-V--------------------LPYEVLQIAEGMASSAAYAVH-RMG   80 (343)
T ss_dssp             CCEEEEES-CCEEEEEEEC-----SSCCCSSSC-C--------------------CCSEEEEEEECHHHHHHHHHH-HTT
T ss_pred             CCeEEEEC-cceEEEEeec-----CCCCCCCCe-E--------------------eeeeeEEcCCcHHHHHHHHHH-HcC
Confidence            35799999 9999999998     456533221 1                    123677899999999999999 899


Q ss_pred             CceeEEeeecCChhHHHHHHHHHhCCceeeceeecCC-CceeEEEEEcCCCCeeeeeCccccCCCCcccCChhhhCCccE
Q 026265           95 VPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKW  173 (241)
Q Consensus        95 ~~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~-~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~~~~i~~~~~  173 (241)
                      .++.++|.+|+|.+|+++++.|++.||++.++.+.++ +|+.++++++++|+|+++.++++...++++++..+.++++++
T Consensus        81 ~~~~~i~~vG~D~~G~~i~~~L~~~GVd~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~~~~~~~~l~~~~l~~~~~  160 (343)
T 2rbc_A           81 GRASLWGAVGDDETGTRILRDLSESGIDTSGMTVAPGARSALSTIIIDNRGERLIVPFYDHRLHEKKRACTPEDIALFDA  160 (343)
T ss_dssp             CEEEEECEEESSHHHHHHHHHHHHTTEECTTCEEETTCCCEEEEEEECTTSCEEEEEECCGGGGSSCCCCCHHHHTTCSE
T ss_pred             CceEEEEEeCCCHHHHHHHHHHHHcCCceeeEEEcCCCCCceEEEEECCCCCEEEEEcCCCcccCChhHhcHhhhCCCCE
Confidence            9999999999999999999999999999999887655 899999999988999998777776677777777667899999


Q ss_pred             EEEEeccccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHh-hhcCCCccEEecCHHHHHhhhC
Q 026265          174 LVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQ-LLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       174 v~~~~~~~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~-~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      +|++..  .++.+.++++.+++.|++++||+.+      +++.+.+ +++  ++|++++|++|++.|+|
T Consensus       161 v~~~~~--~~~~~~~~~~~a~~~g~~v~~Dp~~------~~~~~~~~ll~--~~dil~~N~~Ea~~l~g  219 (343)
T 2rbc_A          161 VLVDVR--WPELALDVLTVARALGKPAILDGDV------APVETLEGLAP--AATHIVFSEPAATRLTG  219 (343)
T ss_dssp             EEECSS--SHHHHHHHHHHHHHTTCCEEEEECS------CCHHHHHHHGG--GCSEEEEEHHHHHHHHC
T ss_pred             EEEcCC--CHHHHHHHHHHHHHCCCEEEEECCc------cccccHHHHHh--cCCEEEeCHHHHHHHcC
Confidence            999943  2467888999999999999999964      3445666 777  99999999999998875

>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A*

Probab=99.96  E-value=1.4e-29  Score=213.24  Aligned_cols=190  Identities=20%  Similarity=0.259  Sum_probs=160.3

Q ss_pred             CCeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcC
Q 026265           15 AALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFG   94 (241)
Q Consensus        15 ~~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG   94 (241)
                      ..+|+++| ++++|+++.+     +++|.+ |....                    .......+||+++|+|++++ +||
T Consensus         2 ~~~i~viG-~~~iD~~~~~-----~~~p~~-g~~~~--------------------~~~~~~~~GG~~~NvA~~la-~lG   53 (299)
T 3ikh_A            2 SLRVYVTG-NITVDETWSI-----PDIPKK-GASIH--------------------GVKVSQDIGGKGANQAIILS-RCG   53 (299)
T ss_dssp             CCCEEEEC-CCEEEEEEEC-----SSCCCT-TCEEE--------------------CEEEEEEEECHHHHHHHHHH-HTT
T ss_pred             CceEEEEC-ceEEEEEEec-----CCCCCC-CCeEE--------------------eeeeeeccCCHHHHHHHHHH-HCC
Confidence            35799999 9999999998     567643 32221                    12578999999999999999 899


Q ss_pred             CceeEEeeecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEEEcCCCCeeeeeCccccCCCCcccCC--hhhhCCcc
Q 026265           95 VPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELI--AEDVKGSK  172 (241)
Q Consensus        95 ~~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~--~~~i~~~~  172 (241)
                      .++.++|.+|+|.+|+++++.|++.||+++++...+.+|+.++++++++|+|+++.++++...+++++++  .+.+++++
T Consensus        54 ~~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~T~~~~~~~~~~g~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~  133 (299)
T 3ikh_A           54 IETRLIAATGNDSNGAWIRQQIKNEPLMLLPDGHFNQHSDTSIILNSADGDNAIITTTAAADTFSLDEMIPHMADAVAGD  133 (299)
T ss_dssp             CCEEEECCCCSSHHHHHHHHHGGGSSCEEESSSCCSSCCEEEEEECSSSCSCEEEEECHHHHHCCHHHHGGGGTTCCTTC
T ss_pred             CCeEEEEEECCCHHHHHHHHHHHHcCCceeeeEecCCCCcEEEEEEcCCCCeEEEEeCCccccCCHHHHHHHHhhhccCC
Confidence            9999999999999999999999999999999865545899999999989999998888887788877765  34678999


Q ss_pred             EEEEEeccccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          173 WLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       173 ~v~~~~~~~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      ++|+++. .+.+.+.++++.+++.|++++||+++.      .+.+.++++  ++|++++|++|++.|+|
T Consensus       134 ~v~~~g~-~~~~~~~~~~~~a~~~g~~v~~D~~~~------~~~~~~ll~--~~dil~~N~~E~~~l~g  193 (299)
T 3ikh_A          134 ILLQQGN-FSLDKTRALFQYARSRGMTTVFNPSPV------NPDFCHLWP--LIDIAVVNESEAELLQP  193 (299)
T ss_dssp             EEEECSC-SCHHHHHHHHHHHHHTTCEEEECCCSC------CGGGGGCGG--GCSEEEEEHHHHHHHCC
T ss_pred             EEEECCC-CCHHHHHHHHHHHHHcCCEEEEccccc------hhhHHHHHh--hCCEEEecHHHHHHHhc
Confidence            9999964 377888999999999999999999754      234556677  99999999999999875

>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus}

Probab=99.96  E-value=4.5e-29  Score=210.41  Aligned_cols=190  Identities=19%  Similarity=0.299  Sum_probs=160.1

Q ss_pred             CeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCC
Q 026265           16 ALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGV   95 (241)
Q Consensus        16 ~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~   95 (241)
                      .+|+++| ++++|+++.+     +++|.+ |...                   +........+||+++|+|++++ +||.
T Consensus         3 ~~v~viG-~~~~D~~~~~-----~~~p~~-g~~~-------------------~~~~~~~~~~GG~~~NvA~~la-~lG~   55 (304)
T 3ry7_A            3 NKVVILG-STNVDQFLTV-----ERYAQP-GETL-------------------HVEEAQKAFGGGKGANQAIATA-RMQA   55 (304)
T ss_dssp             CEEEEEC-CCEEEEEEEC-----SSCCCT-TCCC-------------------CCSSCCEEEEECHHHHHHHHHH-HTTC
T ss_pred             CcEEEEc-cceeEEEEec-----cCCCCC-CCce-------------------ecccceeecCCCHHHHHHHHHH-HCCC
Confidence            5799999 9999999998     566643 2211                   0123688999999999999999 8999


Q ss_pred             ceeEEeeecCChhHHHHHHHHHhCCceeeceeecCC-CceeEEEEEcCCCCeeeeeCccccCCCCcccCCh--hhhCCcc
Q 026265           96 PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA--EDVKGSK  172 (241)
Q Consensus        96 ~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~-~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~~--~~i~~~~  172 (241)
                      ++.++|.+|+|.+|+++++.|++.||+++++.+.++ +|+.++++++++|+|+++.++++...+++++++.  +.+++++
T Consensus        56 ~~~~~~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~  135 (304)
T 3ry7_A           56 DTTFITKIGTDGVADFILEDFKVAHIDTSYIIKTAEAKTGQAFITVNAEGQNTIYVYGGANMTMTPEDVINAKDAIINAD  135 (304)
T ss_dssp             EEEEECEEESSCTTHHHHHHHHHTTCBCTTCEEESSSCCEEEEEEECSSCCEEEEEECGGGGGCCHHHHHTTHHHHHTCS
T ss_pred             CeEEEEEeCCChHHHHHHHHHHHcCCcchhEEEcCCCCCcEEEEEECCCCCEEEEEecCchhcCCHHHHHHHHHHhccCC
Confidence            999999999999999999999999999999987654 8999999999889999988888888888877643  4688999


Q ss_pred             EEEEEeccccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          173 WLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       173 ~v~~~~~~~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      ++|++.. .+.+.+.++++.+++.|+++++|+++.      ++.+.++++  ++|++++|++|++.|+|
T Consensus       136 ~v~~~~~-~~~~~~~~~~~~a~~~~~~v~~D~~~~------~~~~~~ll~--~~dil~~N~~E~~~l~g  195 (304)
T 3ry7_A          136 FVVAQLE-VPIPAIISAFEIAKAHGVTTVLNPAPA------KALPNELLS--LIDIIVPNETEAELLSG  195 (304)
T ss_dssp             EEEEETT-SCHHHHHHHHHHHHHTTCEEEEECCSC------CCCCHHHHT--TCSEECCBHHHHHHHHS
T ss_pred             EEEEcCC-CCHHHHHHHHHHHHHcCCEEEEeCCcc------ccccHHHHH--hCCEEecCHHHHHHHhC
Confidence            9999954 377889999999999999999999754      123445666  99999999999999875

>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A*

Probab=99.96  E-value=1e-28  Score=211.31  Aligned_cols=193  Identities=22%  Similarity=0.237  Sum_probs=160.0

Q ss_pred             CCCeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhc
Q 026265           14 QAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGF   93 (241)
Q Consensus        14 ~~~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~L   93 (241)
                      ..++|+++| .+++|++...+     +.|.+                          .......+||+++|+|++++ +|
T Consensus         3 ~~~~v~viG-~~~iD~~~~~~-----~~~~~--------------------------~~~~~~~~GG~~~NvA~~la-~L   49 (338)
T 3ljs_A            3 LKKTILCFG-EALIDMLAQPL-----VKKGM--------------------------PRAFLQCAGGAPANVAVAVA-RL   49 (338)
T ss_dssp             -CCEEEEES-CCEEEEEECCC-----SSTTS--------------------------CCCEEEEEECHHHHHHHHHH-HH
T ss_pred             CCCCEEEEC-hhhhheeccCC-----CCccc--------------------------hhceeecCCChHHHHHHHHH-hC
Confidence            456899999 99999999883     33311                          13688999999999999999 89


Q ss_pred             CCceeEEeeecCChhHHHHHHHHHhCCceeeceeecCC-CceeEEEEEcCCCCeeeeeCc--cccCCCCcccCChhhhCC
Q 026265           94 GVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCL--SNAVKIQADELIAEDVKG  170 (241)
Q Consensus        94 G~~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~-~T~~~~~~~~~~g~r~~~~~~--g~~~~l~~~~~~~~~i~~  170 (241)
                      |.++.++|.+|+|.+|+++++.|++.||+++++.+.++ +|+.++++++++|+|++.++.  ++...+++++++.+.+++
T Consensus        50 G~~~~~ig~vG~D~~g~~l~~~l~~~gV~~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~a~~~l~~~~~~~~~~~~  129 (338)
T 3ljs_A           50 GGAVQFVGMLGSDMFGDFLFDSFAEAGVVTDGIVRTSTAKTALAFVALDAHGERSFSFYRPPAADLLFRVEHFQDASFSD  129 (338)
T ss_dssp             TCCEEEESEEESSHHHHHHHHHHHHHTCBCTTCEEESSSCCCEEEEECCSTTCCEEEEECSSCGGGGCCGGGCCHHHHHT
T ss_pred             CCCEEEEeeccCCHHHHHHHHHHHHcCCCceeEEEcCCCCceEEEEEECCCCCeEEEEeCCCChhHhCCHhhcCHhHhcC
Confidence            99999999999999999999999999999999987655 899999999888999987654  666678888888778899


Q ss_pred             ccEEEEE-eccc---cHHHHHHHHHHHHHCCCeEEEeCCchHHH----hhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          171 SKWLVLR-FGMF---NFEVIQAAIRIAKQEGLSVSMDLASFEMV----RNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       171 ~~~v~~~-~~~~---~~~~~~~~~~~a~~~g~~i~~D~~~~~~~----~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      ++++|++ +.+.   +.+.+.++++.+++.|++++||++.....    ..+++.+.++++  ++|++++|++|++.|+|
T Consensus       130 ~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~--~~dil~~N~~E~~~l~g  206 (338)
T 3ljs_A          130 ALIFHACSNSMTDADIAEVTFEGMRRAQAAGAIVSFDLNFRPMLWPNGENPASRLWKGLS--LADVVKLSSEELDYLAN  206 (338)
T ss_dssp             EEEEEEEGGGGSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSCTTCCTHHHHHHHHH--TCSEEEEEHHHHHHHHH
T ss_pred             CCEEEECChHhcCchHHHHHHHHHHHHHHcCCEEEEECCCChhhcCCHHHHHHHHHHHHh--hCCEEEecHHHHHHHhC
Confidence            9999999 4432   24778899999999999999999643210    123455677787  99999999999998864

>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A*

Probab=99.96  E-value=1.3e-28  Score=208.11  Aligned_cols=189  Identities=21%  Similarity=0.319  Sum_probs=157.2

Q ss_pred             CeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCC
Q 026265           16 ALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGV   95 (241)
Q Consensus        16 ~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~   95 (241)
                      .+|+++| ++++|++..+     +++|.+ |...                    ........+||+++|+|++++ +||.
T Consensus         5 ~~v~viG-~~~iD~~~~~-----~~~p~~-g~~~--------------------~~~~~~~~~GG~~~N~A~~la-~lG~   56 (309)
T 1rkd_A            5 GSLVVLG-SINADHILNL-----QSFPTP-GETV--------------------TGNHYQVAFGGKGANQAVAAG-RSGA   56 (309)
T ss_dssp             CEEEEEC-CCEEEEEEEC-----SSCCCT-TCCC--------------------CCCCEEEEEECHHHHHHHHHH-HHTC
T ss_pred             CeEEEEC-cceEeEEEec-----CCCCCC-CCee--------------------ecCceeecCCCHHHHHHHHHH-hCCC
Confidence            4799999 9999999998     456533 2211                    123678899999999999999 8999


Q ss_pred             ceeEEeeecCChhHHHHHHHHHhCCceeeceeecCC-CceeEEEEEcCCCCeeeeeCccccCCCCcccCCh--hhhCCcc
Q 026265           96 PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA--EDVKGSK  172 (241)
Q Consensus        96 ~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~-~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~~--~~i~~~~  172 (241)
                      ++.++|.+|+|.+|+++++.|++.||+++++.+.++ +|+.++++++++|+|+++.++++...+++++++.  +.+++++
T Consensus        57 ~~~~~~~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  136 (309)
T 1rkd_A           57 NIAFIACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFVNGEGENVIGIHAGANAALSPALVEAQRERIANAS  136 (309)
T ss_dssp             EEEEEEEEESSTTHHHHHHHHHTTTEECTTEEEETTCCCEEEEEEECTTSCEEEEEECGGGGGCCHHHHHTTHHHHHHCS
T ss_pred             ceEEEEEECCCHHHHHHHHHHHHcCCCccceEecCCCCCceEEEEECCCCCeEEEEeCCchhcCCHHHHHHHHHhcccCC
Confidence            999999999999999999999999999999887655 8999999998889999988888877788776643  4678899


Q ss_pred             EEEEEeccccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          173 WLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       173 ~v~~~~~~~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      ++|+++. .+.+.+..+++.+++.|++++||+++..   .+.   .++++  ++|++++|++|++.|+|
T Consensus       137 ~v~~~~~-~~~~~~~~~~~~a~~~g~~v~~D~~~~~---~~~---~~ll~--~~dil~~N~~E~~~l~g  196 (309)
T 1rkd_A          137 ALLMQLE-SPLESVMAAAKIAHQNKTIVALNPAPAR---ELP---DELLA--LVDIITPNETEAEKLTG  196 (309)
T ss_dssp             EEEECSS-SCHHHHHHHHHHHHHTTCEEEECCCSCC---CCC---HHHHT--TCSEECCCHHHHHHHHS
T ss_pred             EEEEeCC-CCHHHHHHHHHHHHHcCCEEEEECCccc---cch---HHHHh--hCCEEEcCHHHHHHHhC
Confidence            9999854 3678888899999999999999997641   222   24555  99999999999999875

>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii}

Probab=99.96  E-value=2.2e-28  Score=208.44  Aligned_cols=194  Identities=18%  Similarity=0.203  Sum_probs=156.0

Q ss_pred             CCCCeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhh
Q 026265           13 SQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVG   92 (241)
Q Consensus        13 ~~~~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~   92 (241)
                      .+..+|+++| .+++|++...+     .+|..                         ........+||+++|+|++++ +
T Consensus        19 ~~~~~v~viG-~~~~D~~~~~~-----~~p~~-------------------------~~~~~~~~~GG~~~NvA~~la-~   66 (327)
T 3hj6_A           19 KGDLDVVSLG-EILVDMISTEE-----VNSLS-------------------------QSREYTRHFGGSPANIAVNLS-R   66 (327)
T ss_dssp             ---CCEEEES-CCEEEEECCCC-----CSSGG-------------------------GCCEEEEEEECHHHHHHHHHH-H
T ss_pred             cCCCCEEEEc-cceEEEeccCC-----CCCcc-------------------------ccceeeeecCcHHHHHHHHHH-H
Confidence            3457899999 99999998873     34421                         013678999999999999999 8


Q ss_pred             cCCceeEEeeecCChhHHHHHHHHHhCCceeeceeecCC-CceeEEEEEcCCCCeeeeeCccccCCCCcccCChhhhCCc
Q 026265           93 FGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGS  171 (241)
Q Consensus        93 LG~~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~-~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~~~~i~~~  171 (241)
                      ||.++.++|.+|+|.+|+++++.|++.||+++++.+.++ +|+.+++..+ +|+|+++.++++...++++++..+.++++
T Consensus        67 LG~~~~~ig~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~v~~~-~g~~~~~~~~~a~~~~~~~~~~~~~~~~~  145 (327)
T 3hj6_A           67 LGKKVALISRLGADAFGNYLLDVLKGEQIITDGIQQDKERRTTIVYVSKS-TRTPDWLPYREADMYLQEDDIIFELIKRS  145 (327)
T ss_dssp             TTCCEEEECEEESSHHHHHHHHHHHHTTCBCTTCEEESSSCCCEEEECCC-TTCCCEEEECSGGGGCCSCCCHHHHHC--
T ss_pred             cCCcEEEEEEeCCCHHHHHHHHHHHHcCCCcccEEEcCCCCceEEEEEec-CCCccEEEecChhhhCChhhcCHhHhccC
Confidence            999999999999999999999999999999999986554 8988888765 68999888888888888877777788999


Q ss_pred             cEEEEE-ecc---ccHHHHHHHHHHHHHCCCeEEEeCCchHHH----hhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          172 KWLVLR-FGM---FNFEVIQAAIRIAKQEGLSVSMDLASFEMV----RNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       172 ~~v~~~-~~~---~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~----~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      +++|++ +.+   .+.+.+.++++.+++.|++++||+++....    ....+.+.++++  ++|++++|++|++.|+|
T Consensus       146 ~~v~~~g~~l~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~--~~dil~~N~~E~~~l~g  221 (327)
T 3hj6_A          146 KVFHLSTFILSRKPARDTAIKAFNYAREQGKIVCFDPCYRKVLWPEGDDGAGVVEEIIS--RADFVKPSLDDARHLFG  221 (327)
T ss_dssp             CEEEEESHHHHSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSCSSSCSHHHHHHHHT--TCSEECCBHHHHHHHHT
T ss_pred             CEEEECchHhcCchhHHHHHHHHHHHHHCCCEEEEECCCchhhcCCHHHHHHHHHHHHh--hCCEEecCHHHHHHHhC
Confidence            999999 332   135778899999999999999999865311    012345667787  99999999999999875

>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1

Probab=99.96  E-value=2.9e-28  Score=208.01  Aligned_cols=190  Identities=17%  Similarity=0.256  Sum_probs=156.7

Q ss_pred             CeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCC
Q 026265           16 ALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGV   95 (241)
Q Consensus        16 ~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~   95 (241)
                      .+|+++| ++++|+++.+     +++|.+ |...                    ........+||+++|+|++++ +||.
T Consensus        25 ~~vlviG-~~~iD~~~~~-----~~~p~~-g~~~--------------------~~~~~~~~~GG~~~NvA~~la-~LG~   76 (331)
T 2fv7_A           25 AAVVVVG-SCMTDLVSLT-----SRLPKT-GETI--------------------HGHKFFIGFGGKGANQCVQAA-RLGA   76 (331)
T ss_dssp             CSEEEEC-CCEEEEEEEC-----SSCCCT-TCCC--------------------CCSEEEEEEECHHHHHHHHHH-HTTC
T ss_pred             CCEEEEC-cccEEEEEec-----CCCCCC-CceE--------------------ecCceEECcCCHHHHHHHHHH-HCCC
Confidence            5799999 9999999998     456532 2211                    113577899999999999999 8999


Q ss_pred             ceeEEeeecCChhHHHHHHHHHhCCceeeceeecCC-CceeEEEEEcCCCCeeeeeCccccCCCCcccCCh--hhhCCcc
Q 026265           96 PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA--EDVKGSK  172 (241)
Q Consensus        96 ~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~-~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~~--~~i~~~~  172 (241)
                      ++.++|.+|+|.+|+++++.|++.||++.++.+.++ +|+.++++++++|+|+++.++++...+++++++.  +.+++++
T Consensus        77 ~~~~i~~vG~D~~G~~l~~~L~~~Gv~~~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~ga~~~l~~~~~~~~~~~l~~~~  156 (331)
T 2fv7_A           77 MTSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTASIIVNNEGQNIIVIVAGANLLLNTEDLRAAANVISRAK  156 (331)
T ss_dssp             CEEEEEEEESSHHHHHHHHHHHTTTEECTTEEEESSSCCEEEEEEECTTSCEEEEEECGGGGGCCHHHHHHTHHHHHHCS
T ss_pred             CeEEEEEECCChhHHHHHHHHHHcCCcceeeEecCCCCCceEEEEECCCCCeEEEecCCccccCCHHHHHHHHHhhccCC
Confidence            999999999999999999999999999999887654 8999999998889999988888877788776643  3578899


Q ss_pred             EEEEEeccccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          173 WLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       173 ~v~~~~~~~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      ++++++. .+.+.+..+++.+++.|++++||++...  ..+.   .++++  ++|++++|++|++.|+|
T Consensus       157 ~v~~~~~-~~~~~~~~~~~~a~~~g~~v~~Dp~~~~--~~~~---~~ll~--~~dil~~N~~Ea~~l~g  217 (331)
T 2fv7_A          157 VMVCQLE-ITPATSLEALTMARRSGVKTLFNPAPAI--ADLD---PQFYT--LSDVFCCNESEAEILTG  217 (331)
T ss_dssp             EEEECSS-SCHHHHHHHHHHHHHTTCEEEECCCSCC--TTCC---THHHH--TCSEEEEEHHHHHHHHS
T ss_pred             EEEEecC-CCHHHHHHHHHHHHHcCCEEEEeCCccc--ccch---HHHHh--cCCEEEeCHHHHHHHhC
Confidence            9999864 3678888999999999999999997541  1222   24555  99999999999999875

>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A

Probab=99.96  E-value=4.3e-28  Score=204.43  Aligned_cols=188  Identities=18%  Similarity=0.204  Sum_probs=154.6

Q ss_pred             eEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCCc
Q 026265           17 LILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVP   96 (241)
Q Consensus        17 ~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~~   96 (241)
                      +|+++| ++++|+++.+     +++|.+.. ..                    ........+||+++|+|++++ +||.+
T Consensus         7 ~i~viG-~~~iD~~~~~-----~~~p~~~~-~~--------------------~~~~~~~~~GG~~~N~A~~la-~LG~~   58 (302)
T 2c4e_A            7 KITCVG-HTALDYIFNV-----EKFPEPNT-SI--------------------QIPSARKYYGGAAANTAVGIK-KLGVN   58 (302)
T ss_dssp             EEEEES-CCEEEEEEEC-----SSCCCTTC-CC--------------------CCSCEEEEEECHHHHHHHHHH-HTTCE
T ss_pred             cEEEEC-ceeEEEEecc-----cccCCCCc-ee--------------------eecceeecCCCHHHHHHHHHH-HCCCc
Confidence            699999 9999999998     45653221 11                    123678899999999999999 89999


Q ss_pred             eeEEeeecCChhHHHHHHHHHhCCceeeceeecCC-CceeEEEEEcCCCCeeeeeCccccCCCCcccCChhhhCCccEEE
Q 026265           97 CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLV  175 (241)
Q Consensus        97 ~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~-~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~~~~i~~~~~v~  175 (241)
                      +.++|.+|+|.+|+++++.|++.||+++++.+.++ +|+.++++++++|+|+++.+.++...+++++++.   ++++++|
T Consensus        59 ~~~i~~vG~D~~g~~i~~~l~~~gv~~~~~~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~v~  135 (302)
T 2c4e_A           59 SELLSCVGYDFKNSGYERYLKNLDINISKLYYSEEEETPKAWIFTDKDNNQITFFLWGAAKHYKELNPPN---FNTEIVH  135 (302)
T ss_dssp             EEEECEECTTTTTSHHHHHHHHTTCBCTTCEECSSSCCCEEEEEECSSCCEECCEECGGGGGGGGCCCCC---CCEEEEE
T ss_pred             eEEEEEEeCCCchHHHHHHHHHcCCcccceEeeCCCCCceEEEEECCCCCEEEEEeCChhhhCCHhhcCc---ccCCEEE
Confidence            99999999999999999999999999998886655 7999999998889999988888777777777654   7899999


Q ss_pred             EEeccccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          176 LRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       176 ~~~~~~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      ++..  .++.+.++++.+++.| +++||++.... ....+.+.++++  ++|++++|++|++.|+|
T Consensus       136 ~~~~--~~~~~~~~~~~a~~~g-~v~~D~~~~~~-~~~~~~~~~~l~--~~dil~~N~~E~~~l~g  195 (302)
T 2c4e_A          136 IATG--DPEFNLKCAKKAYGNN-LVSFDPGQDLP-QYSKEMLLEIIE--HTNFLFMNKHEFERASN  195 (302)
T ss_dssp             ECSS--CHHHHHHHHHHHBTTB-EEEECCGGGGG-GCCHHHHHHHHH--TCSEEEEEHHHHHHHHH
T ss_pred             EeCC--CcHHHHHHHHHHHhcC-CEEEeCchhhh-hhhHHHHHHHHh--cCCEEEcCHHHHHHHhC
Confidence            9953  3478888999999999 99999985321 011345667787  99999999999998864

>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP}

Probab=99.96  E-value=1.9e-27  Score=203.44  Aligned_cols=202  Identities=18%  Similarity=0.184  Sum_probs=154.1

Q ss_pred             ccceeecccCCCCeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHH
Q 026265            4 EHLIINREASQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVT   83 (241)
Q Consensus         4 ~~~~~~~~~~~~~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~   83 (241)
                      +|+..+ +.++.++|+++| .+++|++...+.           ..                    .........+||+++
T Consensus        16 ~~~~~~-~m~~~~~vlviG-~~~iD~~~~~~g-----------~~--------------------~~~~~~~~~~GG~~~   62 (336)
T 4du5_A           16 ENLYFQ-SMTSALDVITFG-EAMMLLVADRPG-----------PL--------------------EHAEAFHKRTAGAET   62 (336)
T ss_dssp             -----------CEEEEEEC-CCEEEEEESSSS-----------CG--------------------GGCCEEEEEEECHHH
T ss_pred             hheeee-ccCCCCCEEEEC-hhhhhccCCCCC-----------cc--------------------chhhheeecCCCHHH
Confidence            444333 335567899999 999999976521           10                    012367899999999


Q ss_pred             HHHHHHHhhcCCceeEEeeecCChhHHHHHHHHHhCCceeeceeecCC-CceeEEEEEcCCCCeeee-eC--ccccCCCC
Q 026265           84 NTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMR-PC--LSNAVKIQ  159 (241)
Q Consensus        84 N~a~~la~~LG~~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~-~T~~~~~~~~~~g~r~~~-~~--~g~~~~l~  159 (241)
                      |+|++++ +||.++.++|.+|+|.+|+++++.|++.||+++++.+.++ +|+.+++.++++|+++.+ ++  .++...++
T Consensus        63 NvA~~la-~LG~~~~~ig~vG~D~~G~~i~~~L~~~GV~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~a~~~l~  141 (336)
T 4du5_A           63 NVAIGLA-RLGLKVGWASRLGTDSMGRYLLAAMAAEGIDCSHVVCDATQKTGFQFKGKVTDGSDPPVEYHRKGSAASHMG  141 (336)
T ss_dssp             HHHHHHH-HTTCCEEEEEEECSSHHHHHHHHHHHTTTCEEEEEEECTTSCCCEEEECCCSCC--CCEEEECTTCTGGGCC
T ss_pred             HHHHHHH-hCCCcEEEEEEeCCCHHHHHHHHHHHHcCCCcceEEEcCCCCcEEEEEEEcCCCCcceEEEECCCChhHhCC
Confidence            9999999 8999999999999999999999999999999999987765 899999999888855543 32  46677889


Q ss_pred             cccCChhhhCCccEEEEE-ecc-c---cHHHHHHHHHHHHHCCCeEEEeCCchHH----HhhchhhHHhhhcCCCccEEe
Q 026265          160 ADELIAEDVKGSKWLVLR-FGM-F---NFEVIQAAIRIAKQEGLSVSMDLASFEM----VRNFRTPLLQLLESGDVDLCF  230 (241)
Q Consensus       160 ~~~~~~~~i~~~~~v~~~-~~~-~---~~~~~~~~~~~a~~~g~~i~~D~~~~~~----~~~~~~~l~~~l~~~~~d~l~  230 (241)
                      +++++.+.+++++++|++ +.. .   +.+.+.++++.+++.|++++||++....    ...+++.+.++++  ++|+++
T Consensus       142 ~~~~~~~~l~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~--~~dil~  219 (336)
T 4du5_A          142 VADIDEAWLLSARHLHATGVFPAISATTLPAARKTMDLMRAAGRSVSFDPNLRPTLWATPELMRDAINDLAT--RADWVL  219 (336)
T ss_dssp             GGGCCHHHHTTEEEEEEESSGGGSCTTHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSSHHHHHHHHHHHHT--TCSEEC
T ss_pred             hhhCCHhHhccCCEEEEcCchhhCChHHHHHHHHHHHHHHHCCCEEEEeCcCCchhcCChHHHHHHHHHHHH--hCCEEE
Confidence            988888889999999998 322 1   2467788999999999999999973221    0123445667777  999999


Q ss_pred             cCHHHHHhhhC
Q 026265          231 ANEDEAAELVR  241 (241)
Q Consensus       231 ~N~~Ea~~l~g  241 (241)
                      +|++|++.|+|
T Consensus       220 pN~~Ea~~l~g  230 (336)
T 4du5_A          220 PGMEEGRFLTG  230 (336)
T ss_dssp             CBHHHHHHHHC
T ss_pred             CCHHHHHHHhC
Confidence            99999999875

>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str}

Probab=99.95  E-value=1.8e-27  Score=201.90  Aligned_cols=190  Identities=23%  Similarity=0.250  Sum_probs=152.8

Q ss_pred             CeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCC
Q 026265           16 ALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGV   95 (241)
Q Consensus        16 ~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~   95 (241)
                      ++|+++| ++++|++..++     +.|.+ |....                     ......+||+++|+|++++ +||.
T Consensus         4 ~~i~viG-~~~~D~~~~~~-----~~~~~-~~~~~---------------------~~~~~~~GG~~~NvA~~la-~LG~   54 (317)
T 2nwh_A            4 KKILVLG-GAHIDRRGMIE-----TETAP-GASNP---------------------GSWMEEAGGGGFNAARNLS-RLGF   54 (317)
T ss_dssp             CEEEEES-CCEEEEEEEES-----SSCCT-TSCCC---------------------EEEEEEEECHHHHHHHHHH-HTTC
T ss_pred             CeEEEEC-chheEEeeccC-----CCCCC-CCCce---------------------EeEEEeCCcHHHHHHHHHH-hcCC
Confidence            4799999 99999999983     34322 22110                     1367899999999999999 8999


Q ss_pred             ceeEEeeecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEEEcCCCCeeeeeCc-cccCCCCcccCCh----hhhCC
Q 026265           96 PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCL-SNAVKIQADELIA----EDVKG  170 (241)
Q Consensus        96 ~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~~~~g~r~~~~~~-g~~~~l~~~~~~~----~~i~~  170 (241)
                      ++.++|.+|+|.+|+++++.|++.||+++++...+.+|+.++++++++|+|++.++. ++...++++++..    +.++.
T Consensus        55 ~~~~i~~vG~D~~G~~l~~~L~~~gV~~~~~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (317)
T 2nwh_A           55 EVRIIAPRGGDVTGEVVAEAARQAGVEDTPFTFLDRRTPSYTAILERDGNLVIALADMDLYKLFTPRRLKVRAVREAIIA  134 (317)
T ss_dssp             EEEEECEEESSHHHHHHHHHHHHTTCEECCEEETTSCCCEEEEEECTTSCEEEEEEECGGGGGCCHHHHTSHHHHHHHHH
T ss_pred             CcEEEEeecCCchHHHHHHHHHHcCCCCCCcccCCCCCceEEEEEcCCCCEEEEEcchHHHhhCCHHHhhhhhhhhHhcc
Confidence            999999999999999999999999999998444444899999999888999876554 4445677765542    45788


Q ss_pred             ccEEEEEeccccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          171 SKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       171 ~~~v~~~~~~~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      ++++|++.. .+.+.+..+++.+++.|++++||+++..    ..+.+.++++  ++|++++|++|++.|+|
T Consensus       135 ~~~v~~~~~-~~~~~~~~~~~~a~~~g~~v~~Dp~~~~----~~~~~~~ll~--~~dil~~N~~E~~~l~g  198 (317)
T 2nwh_A          135 SDFLLCDAN-LPEDTLTALGLIARACEKPLAAIAISPA----KAVKLKAALG--DIDILFMNEAEARALTG  198 (317)
T ss_dssp             CSEEEEETT-SCHHHHHHHHHHHHHTTCCEEEECCSHH----HHGGGTTTGG--GCSEEEEEHHHHHHHHC
T ss_pred             CCEEEEeCC-CCHHHHHHHHHHHHhcCCeEEEeCCCHH----HHHHHHHHhh--hCeEecCCHHHHHHHhC
Confidence            999999854 3678889999999999999999998653    1234556677  99999999999999875

>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens}

Probab=99.95  E-value=1.2e-27  Score=204.01  Aligned_cols=191  Identities=18%  Similarity=0.232  Sum_probs=154.6

Q ss_pred             CCCCeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhh
Q 026265           13 SQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVG   92 (241)
Q Consensus        13 ~~~~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~   92 (241)
                      .+..+|+++| .+++|++..+     +..|.+ |.+..                     ......+||+++|+|++|+ +
T Consensus         4 ~~~~~v~viG-~~~vD~~~~~-----~~~~~~-g~~~~---------------------~~~~~~~GG~~~NvA~~la-~   54 (328)
T 3kzh_A            4 RKEPYLLVFG-ASVVDVFGFS-----KASYRP-YNSTP---------------------GHVKISFGGVCRNIAENMA-R   54 (328)
T ss_dssp             CCCCCEEEEC-CCEEEEEEEE-----SSCCCT-TSEEE---------------------EEEEEEEECHHHHHHHHHH-H
T ss_pred             CCCCcEEEEC-cEEeeeeecc-----CCCCCC-CCCce---------------------EEEEEccCcHHHHHHHHHH-H
Confidence            3457899999 9999999998     445532 32221                     1467899999999999999 8


Q ss_pred             cCCceeEEeeecCChhHHHHHHHHHhCCceeeceeecCC-CceeEEEEEcCCCCeeeee-CccccCCCCcccCC--hhhh
Q 026265           93 FGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRP-CLSNAVKIQADELI--AEDV  168 (241)
Q Consensus        93 LG~~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~-~T~~~~~~~~~~g~r~~~~-~~g~~~~l~~~~~~--~~~i  168 (241)
                      ||.++.++|.+|+|.+|+++++.|++.||+++++.+.++ +|+.++++++++|+|++.. .+++...++++.+.  .+.+
T Consensus        55 LG~~v~~i~~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (328)
T 3kzh_A           55 VGVNTNFMSILGNDEHGKSIVEHSKKIGYHMDDSMVIEGGSTPTYLAILDENGEMVSAIADMKSIGAMNTDFIDSKREIF  134 (328)
T ss_dssp             TTCCEEEECEECSSHHHHHHHHHHHHHTEECTTCEECTTCCCCEEEEEECTTSCEEEEEEECGGGGGCCHHHHHHTHHHH
T ss_pred             cCCCcEEEEEecCcHHHHHHHHHHHHcCCCccceEEeCCCCCeeEEEEEcCCCCEEEEEEchhhhhhCCHHHHHHHHHhh
Confidence            999999999999999999999999999999998877655 8999999999889998753 45666667766554  3568


Q ss_pred             CCccEEEEEeccccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          169 KGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       169 ~~~~~v~~~~~~~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      ..+++++++..+ + +.+..+++ +++.|++++||+++..    ..+.+.++++  ++|++++|++|++.|+|
T Consensus       135 ~~~~~~~~~~~~-~-~~~~~l~~-a~~~~~~v~~D~~~~~----~~~~~~~~l~--~~dil~~N~~E~~~l~g  198 (328)
T 3kzh_A          135 ENAEYTVLDSDN-P-EIMEYLLK-NFKDKTNFILDPVSAE----KASWVKHLIK--DFHTIKPNRHEAEILAG  198 (328)
T ss_dssp             HTCSEEEEESSC-H-HHHHHHHH-HHTTTSEEEEECCSHH----HHHTSTTTGG--GCSEECCBHHHHHHHHT
T ss_pred             ccCCEEEEeCCc-H-HHHHHHHH-HhhcCCcEEEEeCCHH----HHHHHHHHhc--CCcEEeCCHHHHHHHHC
Confidence            899999999542 4 66767776 8889999999998653    2334556677  99999999999999875

>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A

Probab=99.95  E-value=3.3e-27  Score=199.95  Aligned_cols=189  Identities=22%  Similarity=0.338  Sum_probs=151.7

Q ss_pred             CCCCeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhh
Q 026265           13 SQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVG   92 (241)
Q Consensus        13 ~~~~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~   92 (241)
                      .+..+|+++| ++++|+++.+     +++|.+ |....                    .......+||+++|+|++++ +
T Consensus        15 ~~~~~i~viG-~~~iD~~~~~-----~~~p~~-~~~~~--------------------~~~~~~~~GG~~~NvA~~la-~   66 (312)
T 2hlz_A           15 PRGSQILCVG-LVVLDVISLV-----DKYPKE-DSEIR--------------------CLSQRWQRGGNASNSCTILS-L   66 (312)
T ss_dssp             --CCEEEEES-CCEEEEEEEE-----SSCCCT-TCEEE--------------------CSEEEEEEESHHHHHHHHHH-H
T ss_pred             CCCCcEEEEC-cceEEEeecc-----ccCCCc-cceee--------------------cccceeccCccHHHHHHHHH-H
Confidence            3457899999 9999999998     456532 21110                    12467899999999999999 8


Q ss_pred             cCCceeEEeeecCChhHHHHHHHHHhCCceeeceeecC-CCceeEEEEEc-CCCCeeeeeCccccCCCCcccCChhhhCC
Q 026265           93 FGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKR-GPTGQCVCLVD-ASGNRTMRPCLSNAVKIQADELIAEDVKG  170 (241)
Q Consensus        93 LG~~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~-~~T~~~~~~~~-~~g~r~~~~~~g~~~~l~~~~~~~~~i~~  170 (241)
                      ||.++.++|.+|+|.+|+++++.|++.||+++++.+.+ .+|++++++++ ++|+|+++.++++...+++++++...+++
T Consensus        67 LG~~v~~ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~~~v~~~~g~r~~~~~~~~~~~~~~~~~~~~~l~~  146 (312)
T 2hlz_A           67 LGAPCAFMGSMAPGHVADFVLDDLRRYSVDLRYTVFQTTGSVPIATVIINEASGSRTILYYDRSLPDVSATDFEKVDLTQ  146 (312)
T ss_dssp             HTCCEEEEEEECSSHHHHHHHHHHHHTTCBCTTEEECSSCCCCEEEEEEETTTCCEEEEEECCCCCCCCHHHHHTSCGGG
T ss_pred             cCCceEEEEEecCchHHHHHHHHHHHcCCCCccceeccCCCCCeEEEEEECCCCceEEEecCCccccCCHHHhhHhhhcc
Confidence            99999999999999999999999999999999988774 47899888876 47999998888777778877665456788


Q ss_pred             ccEEEEEeccccHHHHHHHHHHHHHC--------CCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhh
Q 026265          171 SKWLVLRFGMFNFEVIQAAIRIAKQE--------GLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAEL  239 (241)
Q Consensus       171 ~~~v~~~~~~~~~~~~~~~~~~a~~~--------g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l  239 (241)
                      ++++|++..  +++...++++.+++.        ++++++|+...      ++.+.++++  ++|++++|++|++.|
T Consensus       147 ~~~v~~~~~--~~~~~~~~~~~a~~~~~~~~~~~~~~v~~d~~~~------~~~~~~~l~--~~dil~~n~~ea~~l  213 (312)
T 2hlz_A          147 FKWIHIEGR--NASEQVKMLQRIDAHNTRQPPEQKIRVSVEVEKP------REELFQLFG--YGDVVFVSKDVAKHL  213 (312)
T ss_dssp             EEEEEEECS--SHHHHHHHHHHHHHHHTTSCGGGCCEEEEEECSC------CGGGGGGGG--SSSEEEECHHHHHHT
T ss_pred             CCEEEEecc--CHHHHHHHHHHHHHhcccccCCCCeEEEEEcccc------hHHHHHHHh--cCCEEEEcHHHHHHc
Confidence            999999953  356677778877776        78999998642      345667787  999999999998865

>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A*

Probab=99.95  E-value=4e-27  Score=200.50  Aligned_cols=194  Identities=21%  Similarity=0.215  Sum_probs=152.5

Q ss_pred             CCeEEEecCCeeeEEEeecCHhHH---hhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHh
Q 026265           15 AALILGLQPAALIDHVARVDWSLL---DQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSV   91 (241)
Q Consensus        15 ~~~v~~iG~~~~vD~~~~~~~~~l---~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~   91 (241)
                      ..+|+++| .+++|++.......+   +.+|                            .......+||+++|+|++++ 
T Consensus         5 ~~~v~~iG-~~~~D~~~~~~~~~~~~~~~~p----------------------------~~~~~~~~GG~~~NvA~~la-   54 (325)
T 3h49_A            5 NLDVICIG-AAIVDIPLQPVSKNIFDVDSYP----------------------------LERIAMTTGGDAINEATIIS-   54 (325)
T ss_dssp             CEEEEEES-CCEEEEEECSCCGGGGGSSCCC----------------------------CSCCCCEEESHHHHHHHHHH-
T ss_pred             CCeEEEEC-hhhheeeccCCCCccccccccc----------------------------hheeEEccCcHHHHHHHHHH-
Confidence            36899999 999999876532111   1121                            12577899999999999999 


Q ss_pred             hcCCceeEEeeecCChhHHHHHHHHHhCCceeeceeecCC-CceeEEEEEcCCCCeeeeeCccc-cCCCCcccCChhhhC
Q 026265           92 GFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSN-AVKIQADELIAEDVK  169 (241)
Q Consensus        92 ~LG~~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~-~T~~~~~~~~~~g~r~~~~~~g~-~~~l~~~~~~~~~i~  169 (241)
                      +||.++.++|.+|+|.+|+++++.|++.||+++++.+.++ +|+.++++++++|+|+++.+.+. ...+++++++.+.+.
T Consensus        55 ~LG~~~~~ig~vG~D~~G~~i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~  134 (325)
T 3h49_A           55 RLGHRTALMSRIGKDAAGQFILDHCRKENIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGSLWKLNIDDVDFARFS  134 (325)
T ss_dssp             HTTCEEEEECEEESSHHHHHHHHHHHHHTCBCSSCEEETTSCCCEEEEEECTTSCEEEECCTTSHHHHCCGGGCCGGGGG
T ss_pred             HCCCCeEEEEEECCChHHHHHHHHHHHcCCceeeEEecCCCCCceEEEEECCCCceeEEeccCcccccCChhhcChhhhc
Confidence            8999999999999999999999999999999999887655 89999999998999999887653 356778888777889


Q ss_pred             CccEEEEEecc----ccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          170 GSKWLVLRFGM----FNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       170 ~~~~v~~~~~~----~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      +++++|++..+    .+.+.+.++++.+++.+ .+++|+..........+.+.++++  ++|++++|++|++.|+|
T Consensus       135 ~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~-~~~~d~~~~~~~~~~~~~~~~~l~--~~dil~~N~~E~~~l~g  207 (325)
T 3h49_A          135 QAKLLSLASIFNSPLLDGKALTEIFTQAKARQ-MIICADMIKPRLNETLDDICEALS--YVDYLFPNFAEAKLLTG  207 (325)
T ss_dssp             GCSEEEEEEETTSTTSCHHHHHHHHHHHHHTT-CEEEEEECCCSSCCCHHHHHHHHT--TCSEEECBHHHHHHHHT
T ss_pred             cCCEEEEecccCCcccCHHHHHHHHHHHHhcC-CEEEecCCchhhhhHHHHHHHHHh--hCCEEecCHHHHHHHhC
Confidence            99999999321    23578889999999998 456654221101122345667787  99999999999999875

>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1

Probab=99.95  E-value=3.5e-27  Score=199.74  Aligned_cols=186  Identities=20%  Similarity=0.264  Sum_probs=150.5

Q ss_pred             CCCCeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhh
Q 026265           13 SQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVG   92 (241)
Q Consensus        13 ~~~~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~   92 (241)
                      -+-.+|+++| ++++|+++.+     +++|.+ |....                    ..+....+||+++|+|++++ +
T Consensus        12 ~~~~~v~vvG-~~~iD~~~~~-----~~~p~~-g~~~~--------------------~~~~~~~~GG~~~NvA~~la-~   63 (311)
T 1vm7_A           12 HMFLVISVVG-SSNIDIVLKV-----DHFTKP-GETQK--------------------AIEMNVFPGGKGANQAVTVA-K   63 (311)
T ss_dssp             -CCCCEEEEC-CCEEEEEEEC-----SSCCCT-TCEEE--------------------CSEEEEEEECHHHHHHHHHH-H
T ss_pred             cccCCEEEEC-cceeeEEEec-----ccCCCC-CceEe--------------------cCeeeecCCCHHHHHHHHHH-H
Confidence            3457899999 9999999998     567643 32211                    13678899999999999999 8


Q ss_pred             cCCc-eeEEeeecCChhHHHHHHHHHhCCceeeceeecC-CCceeEEEEEcCCCCeeeeeCccccCCCCcccCChhhhCC
Q 026265           93 FGVP-CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKR-GPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKG  170 (241)
Q Consensus        93 LG~~-~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~-~~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~~~~i~~  170 (241)
                      ||.+ +.++|.+|+|.+|+++++.|++.||   ++.+.+ .+|+.++++++++|+|+++.+.++...+++++++.+.+++
T Consensus        64 LG~~~~~~i~~vG~D~~G~~l~~~L~~~gV---~v~~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~l~~~~~~~~~~~~  140 (311)
T 1vm7_A           64 IGEKGCRFVTCIGNDDYSDLLIENYEKLGI---TGYIRVSLPTGRAFIEVDKTGQNRIIIFPGANAELKKELIDWNTLSE  140 (311)
T ss_dssp             HHSSCEEEEEEECSSHHHHHHHHHHHHTTE---EEEEECSSCCCEEEEEECTTSCEEEEEECGGGGGCCGGGCCHHHHTT
T ss_pred             cCCCceEEEEEECCChHHHHHHHHHHHCCC---EEEEcCCCCCeEEEEEECCCCCEEEEEecCccccCCHHHhChhhccc
Confidence            9999 9999999999999999999999999   566543 4899999999888999998888887788888887667899


Q ss_pred             ccEEEEEeccccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          171 SKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       171 ~~~v~~~~~~~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      ++++|++.. .+.+.+..+   +++.|+++++|+++.      .+.+.++++  ++|++++|++|++.|+|
T Consensus       141 ~~~v~~~~~-~~~~~~~~~---a~~~~~~v~~Dp~~~------~~~~~~ll~--~~dil~~N~~E~~~l~g  199 (311)
T 1vm7_A          141 SDILLLQNE-IPFETTLEC---AKRFNGIVIFDPAPA------QGINEEIFQ--YLDYLTPNEKEIEALSK  199 (311)
T ss_dssp             CSEEEECSS-SCHHHHHHH---HHHCCSEEEECCCSC------TTCCGGGGG--GCSEECCBHHHHHHHHH
T ss_pred             CCEEEEeCC-CCHHHHHHH---HHHcCCEEEEeCcch------hhhhHHHHh--hCCEEeCCHHHHHHHhC
Confidence            999999854 255544433   788899999999853      122335566  99999999999998864

>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis}

Probab=99.95  E-value=8.4e-27  Score=200.01  Aligned_cols=191  Identities=12%  Similarity=0.080  Sum_probs=152.3

Q ss_pred             CeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCC
Q 026265           16 ALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGV   95 (241)
Q Consensus        16 ~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~   95 (241)
                      .+|+++| .+++|++..-.           +..                    .........+||+++|+|++|+ +||.
T Consensus         3 ~~v~viG-~~~~D~~~~~~-----------~~~--------------------~~~~~~~~~~GG~~~NvA~~la-~LG~   49 (346)
T 3ktn_A            3 LKIAAFG-EVMLRFTPPEY-----------LML--------------------EQTEQLRMNFVGTGVNLLANLA-HFQL   49 (346)
T ss_dssp             CEEEEEC-CCEEEEECSTT-----------CCT--------------------TTCSCCEEEEECHHHHHHHHHH-HTTC
T ss_pred             CcEEEeC-hhhhhhcCCCC-----------Ccc--------------------cccceeEEeccCHHHHHHHHHH-HcCC
Confidence            5799999 99999885221           100                    1124788999999999999999 8999


Q ss_pred             ceeEEeeecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEEEcCCCCeeeeeC----ccccCCCCcccCC-hhhhCC
Q 026265           96 PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPC----LSNAVKIQADELI-AEDVKG  170 (241)
Q Consensus        96 ~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~~~~g~r~~~~~----~g~~~~l~~~~~~-~~~i~~  170 (241)
                      ++.++|.+|+|.+|+++++.|++.||+++++...+.+|+.+++.++++++++++.+    .++...+++++++ .+.+++
T Consensus        50 ~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~  129 (346)
T 3ktn_A           50 ETALITKLPANRLGEAGKAALRKLGISDQWVGEKGDHIGSFFAEMGYGIRPTQVTYQNRHQSAFGISEAKDYDFEAFLAE  129 (346)
T ss_dssp             EEEEEEEECSSHHHHHHHHHHHHTTCBCTTEEECCSCCEEEEEECCBTTBCCEEEECCCTTSTTTTCCGGGSCHHHHHTT
T ss_pred             CeEEEEecCCCHHHHHHHHHHHHcCCcceEEEeCCCceEEEEEEecCCCCCceEEecCCCCChhhhCChhhcChHHHhCC
Confidence            99999999999999999999999999999998765689999998875556676665    3455678888887 567899


Q ss_pred             ccEEEEE-ecc-cc---HHHHHHHHHHHHHCCCeEEEeCCchHHH------hhchhhHHhhhcCCCccEEecCHHHHHhh
Q 026265          171 SKWLVLR-FGM-FN---FEVIQAAIRIAKQEGLSVSMDLASFEMV------RNFRTPLLQLLESGDVDLCFANEDEAAEL  239 (241)
Q Consensus       171 ~~~v~~~-~~~-~~---~~~~~~~~~~a~~~g~~i~~D~~~~~~~------~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l  239 (241)
                      ++++|++ +.. .+   .+.+.++++.+++.|++++||++.....      +..++.+.++++  ++|++++|++|++.|
T Consensus       130 ~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~r~~~~~~~~~~~~~~~~~~ll~--~~dil~~N~~E~~~l  207 (346)
T 3ktn_A          130 VDMVHICGISLSLTEKTRDAALILAQKAHAYQKKVCFDFNYRPSLNTANSALFMRQQYERILP--YCDIVFGSRRDLVEL  207 (346)
T ss_dssp             CSEEEECTHHHHHCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCCHHHHHHHHHHHHHHGG--GCSEEECCHHHHHHT
T ss_pred             CCEEEEeCccccCCHHHHHHHHHHHHHHHHcCCEEEEeCCCChHHcCCccHHHHHHHHHHHHH--hCCEEEccHHHHHHH
Confidence            9999998 321 12   2678899999999999999999743210      123456777888  999999999999998


Q ss_pred             hC
Q 026265          240 VR  241 (241)
Q Consensus       240 ~g  241 (241)
                      +|
T Consensus       208 ~g  209 (346)
T 3ktn_A          208 LG  209 (346)
T ss_dssp             SC
T ss_pred             hC
Confidence            75

>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0

Probab=99.95  E-value=4.2e-27  Score=199.68  Aligned_cols=193  Identities=15%  Similarity=0.168  Sum_probs=151.8

Q ss_pred             CCCeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhc
Q 026265           14 QAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGF   93 (241)
Q Consensus        14 ~~~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~L   93 (241)
                      +..+|+++| .+++|++...     +..|..                         ........+||+++|+|++++ +|
T Consensus         7 ~~~~v~~iG-~~~~D~~~~~-----~~~p~~-------------------------~~~~~~~~~GG~~~NvA~~la-~L   54 (319)
T 3pl2_A            7 STHEVLAIG-RLGVDIYPLQ-----SGVGLA-------------------------DVQSFGKYLGGSAANVSVAAA-RH   54 (319)
T ss_dssp             CCCSEEEES-CCEEEECBSS-----SSCCGG-------------------------GCCCBCCEEECHHHHHHHHHH-HT
T ss_pred             cCCCEEEEC-hhheeeeccc-----CCCCcc-------------------------ccceeeecCCCcHHHHHHHHH-HC
Confidence            456899999 9999998776     233321                         013678999999999999999 89


Q ss_pred             CCceeEEeeecCChhHHHHHHHHHhCCceeeceeecCC-CceeEEEEEcCCCCeeeeeCc--cc-cCCCCcccCChhhhC
Q 026265           94 GVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCL--SN-AVKIQADELIAEDVK  169 (241)
Q Consensus        94 G~~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~-~T~~~~~~~~~~g~r~~~~~~--g~-~~~l~~~~~~~~~i~  169 (241)
                      |.++.++|.+|+|.+|+++++.|++.||+++++.+.++ +|+.+++.++++|+|+++++.  ++ ...+++++++.+.++
T Consensus        55 G~~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~~  134 (319)
T 3pl2_A           55 GHNSALLSRVGNDPFGEYLLAELERLGVDNQYVATDQTFKTPVTFCEIFPPDDFPLYFYREPKAPDLNIESADVSLDDVR  134 (319)
T ss_dssp             TCCEEEEEEEESSHHHHHHHHHHHHTTEECTTEEEESSSCCCEEEECCBTTTBCCEEEECCSCCGGGGCCGGGSCHHHHH
T ss_pred             CCceEEEEEeCCCHHHHHHHHHHHHcCCccccEEecCCCCceEEEEEEcCCCCeeEEEecCCCcccccCChhhCCHHHhc
Confidence            99999999999999999999999999999999986655 899999988878888877664  34 557888888878889


Q ss_pred             CccEEEEE-eccc--c-HHHHHHHHHHHHHCCCeEEEeCCchHHH----hhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          170 GSKWLVLR-FGMF--N-FEVIQAAIRIAKQEGLSVSMDLASFEMV----RNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       170 ~~~~v~~~-~~~~--~-~~~~~~~~~~a~~~g~~i~~D~~~~~~~----~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      +++++|++ +.+.  + .+.+..+++.+++ +.+++||++.....    ....+.+.++++  ++|++++|++|++.|+|
T Consensus       135 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~v~~D~~~~~~~~~~~~~~~~~~~~~l~--~~dil~~N~~E~~~l~g  211 (319)
T 3pl2_A          135 EADILWFTLTGFSEEPSRGTHREILTTRAN-RRHTIFDLDYRPMFWESPEEATKQAEWALQ--HSTVAVGNKEECEIAVG  211 (319)
T ss_dssp             HCSEEEEEGGGGSSTTHHHHHHHHHHHHTT-CSCEEEECCCCGGGSSCHHHHHHHHHHHHT--TCSEEEECHHHHHHHHS
T ss_pred             cCCEEEEecccccCchhHHHHHHHHHHHHH-CCcEEEeCCCChhhcCCHHHHHHHHHHHHH--hCCEEEcCHHHHHHHcC
Confidence            99999999 3321  2 3445666666655 67789999743210    123455677888  99999999999999875

>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A

Probab=99.95  E-value=1.2e-26  Score=196.21  Aligned_cols=190  Identities=23%  Similarity=0.301  Sum_probs=152.2

Q ss_pred             eEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCCc
Q 026265           17 LILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVP   96 (241)
Q Consensus        17 ~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~~   96 (241)
                      +|+++| ++++|++...+           +..                    .........+||+++|+|++++ +||.+
T Consensus         3 ~i~viG-~~~~D~~~~~~-----------~~~--------------------~~~~~~~~~~GG~~~NvA~~la-~LG~~   49 (309)
T 1v1a_A            3 EVVTAG-EPLVALVPQEP-----------GHL--------------------RGKRLLEVYVGGAEVNVAVALA-RLGVK   49 (309)
T ss_dssp             SEEEES-CCEEEEECSSS-----------SCG--------------------GGCCEEEEEEECHHHHHHHHHH-HHTCC
T ss_pred             cEEEEc-cceEEEecCCC-----------Ccc--------------------cchheeeeecCcHHHHHHHHHH-HcCCC
Confidence            699999 99999985321           100                    0013678899999999999999 89999


Q ss_pred             eeEEeeecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEEEcCCCCeeeeeCc--cccCCCCcccCChhhhCCccEE
Q 026265           97 CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCL--SNAVKIQADELIAEDVKGSKWL  174 (241)
Q Consensus        97 ~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~~~~g~r~~~~~~--g~~~~l~~~~~~~~~i~~~~~v  174 (241)
                      +.++|.+|+|.+|+++++.|++.||++.++.+.+++|+.+++.++++|+|+++++.  ++...+++++++.+.+++++++
T Consensus        50 ~~~~~~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~~t~~~~~~~~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~v  129 (309)
T 1v1a_A           50 VGFVGRVGEDELGAMVEERLRAEGVDLTHFRRAPGFTGLYLREYLPLGQGRVFYYRKGSAGSALAPGAFDPDYLEGVRFL  129 (309)
T ss_dssp             EEEEEEECSSHHHHHHHHHHHHHTCBCTTEEECSSCCCEEEEEECTTSCEEEEEECTTCSGGGCCTTSSCGGGGTTCSEE
T ss_pred             eEEEEEeCCCHHHHHHHHHHHHcCCCCceEEEcCCCCEEEEEEECCCCCceEEEeCCCChhhhCCHhhCChhHhcCCCEE
Confidence            99999999999999999999999999999886645999999998888888876554  4566788888877778999999


Q ss_pred             EEE-ecc----ccHHHHHHHHHHHHHCCCeEEEeCCchHHH---hhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          175 VLR-FGM----FNFEVIQAAIRIAKQEGLSVSMDLASFEMV---RNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       175 ~~~-~~~----~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~---~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      |++ +..    .+.+.+.++++.+++.|++++||++.....   +..++.+.++++  ++|++++|++|++.|+|
T Consensus       130 ~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~l~--~~dil~~N~~E~~~l~g  202 (309)
T 1v1a_A          130 HLSGITPALSPEARAFSLWAMEEAKRRGVRVSLDVNYRQTLWSPEEARGFLERALP--GVDLLFLSEEEAELLFG  202 (309)
T ss_dssp             EEETTGGGSCHHHHHHHHHHHHHHHTTTCEEEEECCCCTTTSCHHHHHHHHHHHGG--GCSEEEEEHHHHHHHHS
T ss_pred             EEeCchhccCchHHHHHHHHHHHHHHcCCEEEEeCCCCcccCCHHHHHHHHHHHHH--hCCEEECcHHHHHHHhC
Confidence            999 432    124677888999999999999999753210   122345667787  99999999999998875

>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri}

Probab=99.95  E-value=8.8e-27  Score=197.82  Aligned_cols=184  Identities=18%  Similarity=0.201  Sum_probs=145.1

Q ss_pred             CeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcC-
Q 026265           16 ALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFG-   94 (241)
Q Consensus        16 ~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG-   94 (241)
                      ++|+++| .+++|++...                                      ......+||+++|+|++++ +|| 
T Consensus         5 ~~i~viG-~~~~D~~~~~--------------------------------------~~~~~~~GG~~~NvA~~la-~LG~   44 (319)
T 3lhx_A            5 KKIAVIG-ECMIELSEKG--------------------------------------ADVKRGFGGDTLNTSVYIA-RQVD   44 (319)
T ss_dssp             EEEEEES-CCEEEEEC-----------------------------------------CCEEEEECHHHHHHHHHH-TTSC
T ss_pred             Cceeeec-hhhhhhccCC--------------------------------------CceEEecCChHHHHHHHHH-HcCC
Confidence            5799999 9999997543                                      1467899999999999999 899 


Q ss_pred             ---CceeEEeeecCChhHHHHHHHHHhCCceeeceeecCC-CceeEEEEEcCCCCeeeeeCccc---cCCCCcccCC--h
Q 026265           95 ---VPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSN---AVKIQADELI--A  165 (241)
Q Consensus        95 ---~~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~-~T~~~~~~~~~~g~r~~~~~~g~---~~~l~~~~~~--~  165 (241)
                         .++.++|.+|+|.+|+++++.|++.||+++++.+.++ +|+.++++++++|+|+++.+++.   ...+++++++  .
T Consensus        45 ~~~~~~~~ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~i~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~  124 (319)
T 3lhx_A           45 PAALTVHYVTALGTDSFSQQMLDAWHGENVDTSLTQRMENRLPGLYYIETDSTGERTFYYWRNEAAAKFWLASEQSAAIC  124 (319)
T ss_dssp             TTTEEEEEECEECSSHHHHHHHHHHHTTTEECTTCEECTTCCCCEEEEEC----CCEEEEECTTCGGGGTTSSSSHHHHH
T ss_pred             CCCCcEEEEEEeCCCHHHHHHHHHHHHcCCCcceEEEcCCCCceEEEEEeCCCCCeeEEEecCCCHHHhccCccchhhHH
Confidence               8999999999999999999999999999999987765 89999999988899999887663   2345555443  2


Q ss_pred             hhhCCccEEEEE-ecc--cc---HHHHHHHHHHHHHCCCeEEEeCCchHHH----hhchhhHHhhhcCCCccEEecCHHH
Q 026265          166 EDVKGSKWLVLR-FGM--FN---FEVIQAAIRIAKQEGLSVSMDLASFEMV----RNFRTPLLQLLESGDVDLCFANEDE  235 (241)
Q Consensus       166 ~~i~~~~~v~~~-~~~--~~---~~~~~~~~~~a~~~g~~i~~D~~~~~~~----~~~~~~l~~~l~~~~~d~l~~N~~E  235 (241)
                      +.+++++++|++ +..  .+   .+.+.++++.+++.|++++||++.....    +..++.+.++++  ++|++++|+.|
T Consensus       125 ~~l~~~~~v~~~g~~~~~l~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~--~~di~~~n~~E  202 (319)
T 3lhx_A          125 EELANFDYLYLSGISLAILSPTSREKLLSLLRECRAKGGKVIFDNNYRPRLWASKEETQQVYQQMLE--CTDIAFLTLDD  202 (319)
T ss_dssp             HHHTTCSEEEEEHHHHHTSCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSCHHHHHHHHHHHHT--TCSEEEEEHHH
T ss_pred             HHhcCCCEEEEcCchhhhcCchhHHHHHHHHHHHHhcCCEEEEeCcCCcccccCHHHHHHHHHHHHh--hCCcccCCHHH
Confidence            568999999999 321  12   3678899999999999999999754210    112344566777  99999999999


Q ss_pred             HHhhhC
Q 026265          236 AAELVR  241 (241)
Q Consensus       236 a~~l~g  241 (241)
                      ++.|+|
T Consensus       203 ~~~l~g  208 (319)
T 3lhx_A          203 EDALWG  208 (319)
T ss_dssp             HHHHHC
T ss_pred             HHHHhC
Confidence            998875

>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125}

Probab=99.94  E-value=3.8e-26  Score=194.80  Aligned_cols=194  Identities=24%  Similarity=0.290  Sum_probs=153.1

Q ss_pred             CCCeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhc
Q 026265           14 QAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGF   93 (241)
Q Consensus        14 ~~~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~L   93 (241)
                      +..+|+++| .+++|++....     ..|..                         ........+||+++|+|++++ +|
T Consensus        10 ~~~~i~viG-~~~~D~~~~~~-----~~~~~-------------------------~~~~~~~~~GG~~~NvA~~la-~L   57 (332)
T 2qcv_A           10 REFDLIAIG-RACIDLNAVEY-----NRPME-------------------------ETMTFSKYVGGSPANIVIGSS-KL   57 (332)
T ss_dssp             CSEEEEEES-CCEEEEEESSC-----SSCGG-------------------------GCCCEEEEEESHHHHHHHHHH-HT
T ss_pred             cCCcEEEEC-cceEEEecCCC-----CCCcc-------------------------ccceeEecCCCHHHHHHHHHH-Hc
Confidence            346899999 99999998762     22210                         013678999999999999999 89


Q ss_pred             CCceeEEeeecCChhHHHHHHHHHhCCceeeceeecC--CCceeEEEEEcCCCCeeeeeCc--cccCCCCcccCChhhhC
Q 026265           94 GVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKR--GPTGQCVCLVDASGNRTMRPCL--SNAVKIQADELIAEDVK  169 (241)
Q Consensus        94 G~~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~--~~T~~~~~~~~~~g~r~~~~~~--g~~~~l~~~~~~~~~i~  169 (241)
                      |.++.++|.+|+|.+|+++++.|++.||+++++.+.+  .+|+.+++.++.+|+++++++.  ++...+++++++...++
T Consensus        58 G~~~~~i~~vG~D~~G~~l~~~L~~~gV~~~~v~~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~a~~~l~~~~~~~~~~~  137 (332)
T 2qcv_A           58 GLKAGFIGKIADDQHGRFIESYMRGVGVDTSNLVVDQEGHKTGLAFTEIKSPEECSILMYRQDVADLYLSPEEVNEAYIR  137 (332)
T ss_dssp             TCCEEEEEEECSSHHHHHHHHHHHHTTCBCTTEEECSSCCCCCEEEEEEEETTEEEEEEECTTCGGGGCCGGGCCHHHHT
T ss_pred             CCceEEEEEeCCCHHHHHHHHHHHHcCCCCcceEecCCCCCceEEEEEEcCCCCccEEEECCcchhhhCCHhHCCHHHHc
Confidence            9999999999999999999999999999999988764  3799999887767888776554  34567888888777789


Q ss_pred             CccEEEEEec-c--c-cHHHHHHHHHHHHHCCCeEEEeCCchHHH----hhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          170 GSKWLVLRFG-M--F-NFEVIQAAIRIAKQEGLSVSMDLASFEMV----RNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       170 ~~~~v~~~~~-~--~-~~~~~~~~~~~a~~~g~~i~~D~~~~~~~----~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      +++++|++.. .  . +.+.+.++++.+++.|+++++|++.....    +...+.+.++++  ++|++++|++|++.|+|
T Consensus       138 ~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~--~~dil~~N~~E~~~l~g  215 (332)
T 2qcv_A          138 RSKLLLVSGTALSKSPSREAVLKAIRLAKRNDVKVVFELDYRPYSWETPEETAVYYSLVAE--QSDIVIGTREEFDVLEN  215 (332)
T ss_dssp             TEEEEEEEGGGGSSTTHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSCHHHHHHHHHHHHH--HCSEEEEEHHHHHHHTT
T ss_pred             cCCEEEEeCccccCchhHHHHHHHHHHHHHCCCEEEEcCcCchhhcCCHHHHHHHHHHHHH--hCCEEEccHHHHHHHhC
Confidence            9999999932 2  1 24678888999999999999999753210    112233555777  99999999999998875

>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A*

Probab=99.94  E-value=1.5e-26  Score=195.89  Aligned_cols=189  Identities=17%  Similarity=0.220  Sum_probs=152.3

Q ss_pred             CeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCC
Q 026265           16 ALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGV   95 (241)
Q Consensus        16 ~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~   95 (241)
                      .+|+++| .+++|++...+.    +.                           .........+||+++|+|++++ +||.
T Consensus         2 ~~v~viG-~~~iD~~~~~~g----~~---------------------------~~~~~~~~~~GG~~~NvA~~la-~LG~   48 (313)
T 3ewm_A            2 SLIASIG-ELLIDLISVEEG----DL---------------------------KDVRLFEKHPGGAPANVAVGVS-RLGV   48 (313)
T ss_dssp             CEEEEES-CCEEEEEESSSS----CT---------------------------TTCCEEEEEEECHHHHHHHHHH-HTTC
T ss_pred             CcEEEEC-ceeeeeecCCCC----Cc---------------------------ccccceeecCCCHHHHHHHHHH-HCCC
Confidence            4799999 999999876521    00                           0123678999999999999999 8999


Q ss_pred             ceeEEeeecCChhHHHHHHHHHhCCceeeceeecCC-CceeEEEEEcCCCCeeeeeCcc-ccCCCCcccCChhhhCCccE
Q 026265           96 PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLS-NAVKIQADELIAEDVKGSKW  173 (241)
Q Consensus        96 ~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~-~T~~~~~~~~~~g~r~~~~~~g-~~~~l~~~~~~~~~i~~~~~  173 (241)
                      ++.++|.+|+|.+|+++++.|++.||+++++.+.++ +|+.+++.+++ |+|+++.+.+ +...+++++++.+.++++++
T Consensus        49 ~~~~ig~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~~~~~~-g~~~~~~~~~~a~~~l~~~~~~~~~l~~~~~  127 (313)
T 3ewm_A           49 KSSLISKVGNDPFGEYLIEELSKENVDTRGIVKDEKKHTGIVFVQLKG-ASPSFLLYDDVAYFNMTLNDINWDIVEEAKI  127 (313)
T ss_dssp             EEEEEEEEESSHHHHHHHHHHHHTTCBCTTEEEESSSCCEEEEEECSS-SSCEEEECCSSGGGCCCGGGCCHHHHHHCSE
T ss_pred             CeEEEEEeCCCHHHHHHHHHHHHcCCCccceeecCCCCceEEEEEecC-CCcceEeeccCHHHhCChhhCCHHHhCCCCE
Confidence            999999999999999999999999999999886554 89999998875 9999988876 44678888888778889999


Q ss_pred             EEEE-ecc---ccHHHHHHHHHHHHHCCCeEEEeCCchHHH-----hhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          174 LVLR-FGM---FNFEVIQAAIRIAKQEGLSVSMDLASFEMV-----RNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       174 v~~~-~~~---~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~-----~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      +|++ +.+   .+.+.+.++++.++ .+++++||++.....     +.+.+.+.++++  ++|++++|++|++.|++
T Consensus       128 ~~~~g~~~~~~~~~~~~~~~~~~a~-~~~~v~~Dp~~~~~~~~~~~~~~~~~~~~~l~--~~di~~~N~~E~~~l~~  201 (313)
T 3ewm_A          128 VNFGSVILARNPSRETVMKVIKKIK-GSSLIAFDVNLRLDLWRGQEEEMIKVLEESIK--LADIVKASEEEVLYLEN  201 (313)
T ss_dssp             EEEESGGGGSTTHHHHHHHHHHHHB-TTBEEEEECCCCGGGGTTCHHHHHHHHHHHHH--HCSEEEEEHHHHHHHHT
T ss_pred             EEEcCcccCCcchHHHHHHHHHHhc-cCCEEEEeCCCChHHcCCCHHHHHHHHHHHHh--hCCEEecCHHHHHHHhc
Confidence            9999 322   23577888888888 479999999754210     112345566777  89999999999998864

>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A*

Probab=99.94  E-value=2e-26  Score=196.41  Aligned_cols=186  Identities=15%  Similarity=0.182  Sum_probs=149.8

Q ss_pred             CCeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhc-
Q 026265           15 AALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGF-   93 (241)
Q Consensus        15 ~~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~L-   93 (241)
                      ..+|+++| .+++|++....+                                    ..+...+||+++|+|++++ +| 
T Consensus        23 m~~i~viG-~~~iD~~~~~~~------------------------------------~~~~~~~GG~~~NvA~~la-~Lg   64 (328)
T 4e69_A           23 MMHILSIG-ECMAELAPADLP------------------------------------GTYRLGFAGDTFNTAWYLA-RLR   64 (328)
T ss_dssp             SCEEEEES-CCEEEEEECSST------------------------------------TEEEEEEECHHHHHHHHHH-HHC
T ss_pred             CCcEEEec-CcEEEEecCCCC------------------------------------CceEEecCCHHHHHHHHHH-hcC
Confidence            36899999 999999986310                                    1577899999999999999 89 


Q ss_pred             -CCceeEEeeecCChhHHHHHHHHHhCCceeeceeecCC-CceeEEEEEcCCCCeeeeeCccccC---CCCcccCChhhh
Q 026265           94 -GVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNAV---KIQADELIAEDV  168 (241)
Q Consensus        94 -G~~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~-~T~~~~~~~~~~g~r~~~~~~g~~~---~l~~~~~~~~~i  168 (241)
                       |.++.++|.+|+|.+|+++++.|++.||+++++.+.++ +|+.++++++ +|+|+++.+++...   .++..++..+.+
T Consensus        65 ~G~~~~~ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~v~~~-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~  143 (328)
T 4e69_A           65 PESRISYFSAIGDDALSQQMRAAMSAAGIDGGGLRVIPGRTVGLYLITLE-QGERSFAYWRGQSAARELAGDADALAAAM  143 (328)
T ss_dssp             TTSEEEEECEECSSHHHHHHHHHHHHTTEECTTCEECTTCCCEEEEEEEE-TTEEEEEEECTTCGGGGTTSCHHHHHHHH
T ss_pred             CCCcEEEEEeeCCCHHHHHHHHHHHHcCCccceEEEcCCCCCeEEEEEec-CCceEEEEeCCCCHHHhhcCccccchHHh
Confidence             89999999999999999999999999999999888766 8999999999 89999987766422   234433334678


Q ss_pred             CCccEEEEE-ecc--c---cHHHHHHHHHHHHHCCCeEEEeCCchHH----HhhchhhHHhhhcCCCccEEecCHHHHHh
Q 026265          169 KGSKWLVLR-FGM--F---NFEVIQAAIRIAKQEGLSVSMDLASFEM----VRNFRTPLLQLLESGDVDLCFANEDEAAE  238 (241)
Q Consensus       169 ~~~~~v~~~-~~~--~---~~~~~~~~~~~a~~~g~~i~~D~~~~~~----~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~  238 (241)
                      +++|++|++ +.+  .   +.+.+.++++.+++.|++++||++....    .+..++.+.++++  ++|++++|++|++.
T Consensus       144 ~~~~~v~~~g~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~--~~dil~~N~~E~~~  221 (328)
T 4e69_A          144 ARADVVYFSGITLAILDQCGRATLLRALAQARATGRTIAFDPNLRPRLWAGTGEMTETIMQGAA--VSDIALPSFEDEAA  221 (328)
T ss_dssp             TTCSEEEEEHHHHHTSCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCSCHHHHHHHHHHHHT--TCSEECCBHHHHHH
T ss_pred             cCCCEEEECCchhhccCchHHHHHHHHHHHHHhCCCEEEEeCCCChhhcCCHHHHHHHHHHHHH--hCCEEeCCHHHHHH
Confidence            999999999 321  1   2467788899999999999999963321    0123445667887  99999999999998


Q ss_pred             hhC
Q 026265          239 LVR  241 (241)
Q Consensus       239 l~g  241 (241)
                      |+|
T Consensus       222 l~g  224 (328)
T 4e69_A          222 WFG  224 (328)
T ss_dssp             HHT
T ss_pred             HcC
Confidence            875

>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A

Probab=99.94  E-value=2.3e-26  Score=196.21  Aligned_cols=193  Identities=21%  Similarity=0.287  Sum_probs=150.0

Q ss_pred             CeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCC
Q 026265           16 ALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGV   95 (241)
Q Consensus        16 ~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~   95 (241)
                      .+|+++| .+++|++...+.     -.    .. .                   ........+||+++|+|++++ +||.
T Consensus         4 ~~i~viG-~~~~D~~~~~~~-----~~----~~-~-------------------~~~~~~~~~GG~~~NvA~~la-~LG~   52 (330)
T 3iq0_A            4 SKVFTIG-EILVEIMASKIG-----QP----FD-Q-------------------PGIWNGPYPSGAPAIFIDQVT-RLGV   52 (330)
T ss_dssp             CEEEEES-CCEEEEEEEEET-----CC----SS-S-------------------CEEEEEEEEECHHHHHHHHHH-HTTC
T ss_pred             CCEEEEc-ceeEEEeccCCC-----CC----cc-c-------------------cccccCcCCCCHHHHHHHHHH-HCCC
Confidence            5799999 999999987421     00    00 0                   000235789999999999999 8999


Q ss_pred             ceeEEeeecCChhHHHHHHHHHhCCceeeceeecCC-CceeEEEEEcCCCCeeeee-Cc-cccCCCCcccCChhhhCCcc
Q 026265           96 PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRP-CL-SNAVKIQADELIAEDVKGSK  172 (241)
Q Consensus        96 ~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~-~T~~~~~~~~~~g~r~~~~-~~-g~~~~l~~~~~~~~~i~~~~  172 (241)
                      ++.++|.+|+|.+|+++++.|++.||+++++.+.++ +|+.++++++++|+|++.+ .. ++...++++++....+++++
T Consensus        53 ~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~i~~~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~  132 (330)
T 3iq0_A           53 PCGIISCVGNDGFGDINIHRLAADGVDIRGISVLPLEATGSAFVTYHNSGDRDFIFNIKNAACGKLSAQHVDENILKDCT  132 (330)
T ss_dssp             CEEEEEEEESSHHHHHHHHHHHHTTCBCTTEEEETTSCCEEEEEEECC---CEEEEECTTSGGGGCCGGGCCGGGGTTEE
T ss_pred             cEEEEEEeCCChHHHHHHHHHHHcCCCeeeEEEcCCCCceEEEEEECCCCCeeEEEeccCChhhhCCHhhCCHhHhccCC
Confidence            999999999999999999999999999999987655 8999999998889995443 33 45567888888877899999


Q ss_pred             EEEEE-ecccc---HHHHHHHHHHHHHCCCeEEEeCCchHHH---hhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          173 WLVLR-FGMFN---FEVIQAAIRIAKQEGLSVSMDLASFEMV---RNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       173 ~v~~~-~~~~~---~~~~~~~~~~a~~~g~~i~~D~~~~~~~---~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      ++|++ +...+   .+.+.++++.+++.|+++++|++.....   +..++.+.++++  ++|++++|++|++.|+|
T Consensus       133 ~v~~sg~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~l~--~~dil~~N~~E~~~l~g  206 (330)
T 3iq0_A          133 HFHIMGSSLFSFHMVDAVKKAVTIVKANGGVISFDPNIRKEMLDIPEMRDALHFVLE--LTDIYMPSEGEVLLLSP  206 (330)
T ss_dssp             EEEEEGGGCSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGGGSHHHHHHHHHHHH--TCSEECCBGGGTTTTCS
T ss_pred             EEEEechhhcCcchHHHHHHHHHHHHHcCCEEEEcCCCCccccCcHHHHHHHHHHHh--hCCEEecCHHHHHHHhC
Confidence            99999 43222   4568889999999999999999765310   113445667777  99999999999998875

>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A

Probab=99.94  E-value=3.5e-26  Score=194.15  Aligned_cols=184  Identities=19%  Similarity=0.203  Sum_probs=148.1

Q ss_pred             eEEEecCCeeeEE-EeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCC
Q 026265           17 LILGLQPAALIDH-VARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGV   95 (241)
Q Consensus        17 ~v~~iG~~~~vD~-~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~   95 (241)
                      +|+++++|+++|+ ++.+     +++  ..|....                    .......+||+++|+|++++ +||.
T Consensus         3 mi~tvt~np~iD~~~~~v-----~~~--~~g~~~~--------------------~~~~~~~~GG~~~NvA~~la-~LG~   54 (320)
T 3ie7_A            3 LIYTITLNPAIDRLLFIR-----GEL--EKRKTNR--------------------VIKTEFDCGGKGLHVSGVLS-KFGI   54 (320)
T ss_dssp             CEEEEESSCEEEEEEEES-----SSC--CTTSCCC--------------------CSEEEEEEESHHHHHHHHHH-HHTC
T ss_pred             eEEEEecchHHeeeEEEc-----CCc--cCCCeeE--------------------eceeeecCCchHHHHHHHHH-HcCC
Confidence            5778877999999 9999     444  3444322                    23688999999999999999 8999


Q ss_pred             ceeEEeeecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEEEcCCCC--eeeeeCccccCCCCcccCCh------hh
Q 026265           96 PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGN--RTMRPCLSNAVKIQADELIA------ED  167 (241)
Q Consensus        96 ~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~~~~g~--r~~~~~~g~~~~l~~~~~~~------~~  167 (241)
                      ++.++|.+|+| +|+++++.|++.||+++++...+++|+.++++++ +|+  |+++..+++  .+++++++.      +.
T Consensus        55 ~~~~i~~vG~d-~g~~i~~~l~~~gv~~~~v~~~~~~t~~~~~~~~-~g~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~  130 (320)
T 3ie7_A           55 KNEALGIAGSD-NLDKLYAILKEKHINHDFLVEAGTSTRECFVVLS-DDTNGSTMIPEAGF--TVSQTNKDNLLKQIAKK  130 (320)
T ss_dssp             CEEEEEEEEST-THHHHHHHHHHTTCCBCCEEETTCCCEEEEEEEE-TTCSCCEEEECCCC--CCCHHHHHHHHHHHHHH
T ss_pred             CeEEEEEecCc-hHHHHHHHHHHcCCceEEEEecCCCCceEEEEEE-CCCceeEEEeCCCC--CCCHHHHHHHHHHHHHH
Confidence            99999999998 9999999999999999999545558999999998 788  888776663  566655542      46


Q ss_pred             hCCccEEEEEecc---ccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          168 VKGSKWLVLRFGM---FNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       168 i~~~~~v~~~~~~---~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      +++++++|++..+   .+.+.+.++++.+++.|++++||+++.        .+++.+. .++|++++|++|++.|+|
T Consensus       131 ~~~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~--------~l~~~l~-~~~dil~~N~~E~~~l~g  198 (320)
T 3ie7_A          131 VKKEDMVVIAGSPPPHYTLSDFKELLRTVKATGAFLGCDNSGE--------YLNLAVE-MGVDFIKPNEDEVIAILD  198 (320)
T ss_dssp             CCTTCEEEEESCCCTTCCHHHHHHHHHHHHHHTCEEEEECCHH--------HHHHHHH-HCCSEECCBTTGGGGGSC
T ss_pred             hcCCCEEEEeCCCCCCCCHHHHHHHHHHHHhcCCEEEEECChH--------HHHHHHh-cCCeEEeeCHHHHHHHhC
Confidence            7899999998322   245788999999999999999999753        2333332 189999999999999875

>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A*

Probab=99.94  E-value=1.8e-26  Score=196.66  Aligned_cols=195  Identities=14%  Similarity=0.099  Sum_probs=151.0

Q ss_pred             eEEEecCCeeeEEEeecCHhHHhhCCC---CCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhc
Q 026265           17 LILGLQPAALIDHVARVDWSLLDQIPG---ERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGF   93 (241)
Q Consensus        17 ~v~~iG~~~~vD~~~~~~~~~l~~~~~---~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~L   93 (241)
                      +|+++| ++++|+++.++..+++++-.   +.-+.++                   ........+||+++|+|++++ +|
T Consensus         2 ~i~v~G-~~~iD~~~~~~~~~~~~~~~~~~p~~~~~~-------------------~~~~~~~~~GG~~~NvA~~la-~L   60 (326)
T 3b1n_A            2 ATLICG-SIAYDNIMTFEGRFREHILPDQVHLINLSF-------------------LVPTMRREFGGCAGNIAYALN-LL   60 (326)
T ss_dssp             CEEEES-CCEEEEEEECSSCGGGGCCTTSSSSCEEEE-------------------ECCSCCCEEECHHHHHHHHHH-HT
T ss_pred             cEEEEC-cceEEEEEecchhhhhhccccccCCCCcce-------------------ecccceeccCCHHHHHHHHHH-Hc
Confidence            599999 99999999985444433311   0000000                   013567899999999999999 89


Q ss_pred             CCceeEEeeecC-ChhHHHHHHHHHhCCceeeceeecCC-CceeEEEEEcCCCCeeeeeCccccCCCCcccCChhhhCCc
Q 026265           94 GVPCGLIGAYGD-DQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGS  171 (241)
Q Consensus        94 G~~~~~vg~vG~-D~~g~~i~~~l~~~gvd~~~~~~~~~-~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~~~~i~~~  171 (241)
                      |.++.++|.+|+ | +|+ +++.|++.||+++++.+.++ +|+.++++++++|+|++.+++++...++++++...  +++
T Consensus        61 G~~~~~i~~vG~~D-~g~-i~~~L~~~gVd~~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~ga~~~~~~~~~~~~--~~~  136 (326)
T 3b1n_A           61 GGDARMMGTLGAVD-AQP-YLDRMDALGLSREYVRVLPDTYSAQAMITTDLDNNQITAFHPGAMMQSHVNHAGEA--KDI  136 (326)
T ss_dssp             TCCEEEEEEEETTT-CHH-HHHHHHHHTCEEEEEEEETTCCCEEEEEEECTTCCCEEEEECGGGGGGGGSCGGGC--CSC
T ss_pred             CCCeeEEEEECCcC-HHH-HHHHHHHcCCcccceEEcCCCCceEEEEEECCCCceEEEEecChhhhcChhhcccc--cCC
Confidence            999999999999 8 899 99999999999999887654 89999999988888888777777666666555432  789


Q ss_pred             cEEEEEeccccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          172 KWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       172 ~~v~~~~~~~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      +++|++..  .++.+.++++.+++.|++++||++..... ...+.+.++++  ++|++++|++|++.|+|
T Consensus       137 ~~v~~~~~--~~~~~~~~~~~a~~~g~~v~~D~~~~~~~-~~~~~~~~~l~--~~dil~~N~~Ea~~l~g  201 (326)
T 3b1n_A          137 KLAIVGPD--GFQGMVQHTEELAQAGVPFIFDPGQGLPL-FDGATLRRSIE--LATYIAVNDYEAKLVCD  201 (326)
T ss_dssp             SEEEECSC--CHHHHHHHHHHHHHHTCCEEECCGGGGGG-CCHHHHHHHHH--HCSEEEEEHHHHHHHHH
T ss_pred             CEEEECCc--cHHHHHHHHHHHHHCCCEEEEeCchhhhh-ccHHHHHHHHH--hCCEEecCHHHHHHHhC
Confidence            99999843  35778888999999999999999754210 01244667777  89999999999998863

>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A*

Probab=99.94  E-value=2.7e-26  Score=196.49  Aligned_cols=183  Identities=20%  Similarity=0.323  Sum_probs=142.0

Q ss_pred             CeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCC
Q 026265           16 ALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGV   95 (241)
Q Consensus        16 ~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~   95 (241)
                      .+|+++| ++++|++....                                     ......+||+++|+|++++ +||.
T Consensus        25 ~~ilviG-~~~~D~~~~~~-------------------------------------~~~~~~~GG~~~NvA~~la-~LG~   65 (339)
T 1tyy_A           25 NKVWVIG-DASVDLVPEKQ-------------------------------------NSYLKCPGGASANVGVCVA-RLGG   65 (339)
T ss_dssp             CCEEEES-CCEEEEEECSS-------------------------------------SEEEEEEECHHHHHHHHHH-HTTC
T ss_pred             CCEEEEC-cceeEEeccCC-------------------------------------CceEEcCCCHHHHHHHHHH-HcCC
Confidence            4799999 99999987641                                     1466899999999999999 8999


Q ss_pred             ceeEEeeecCChhHHHHHHHHHhCCceeeceeecCC-CceeEEEEEcCCCCeeeeeCc--cccCCCCcccCChhhhCCcc
Q 026265           96 PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCL--SNAVKIQADELIAEDVKGSK  172 (241)
Q Consensus        96 ~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~-~T~~~~~~~~~~g~r~~~~~~--g~~~~l~~~~~~~~~i~~~~  172 (241)
                      ++.++|.+|+|.+|+++++.|++.||++.++.+.++ +|+.+++.++++|+|++.++.  ++...++++.  .+.+++++
T Consensus        66 ~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~a~~~l~~~~--~~~l~~~~  143 (339)
T 1tyy_A           66 ECGFIGCLGDDDAGRFLRQVFQDNGVDVTFLRLDADLTSAVLIVNLTADGERSFTYLVHPGADTYVSPQD--LPPFRQYE  143 (339)
T ss_dssp             CEEEEEEECSSHHHHHHHHHHHTTTEECTTEEECTTSCCCEEEEC-------CEEECCSSCGGGGCCGGG--CCCCCTTC
T ss_pred             CeEEEEeeCCCHHHHHHHHHHHHcCCCchheEecCCCCCeEEEEEEcCCCCeEEEEecCCChhhhCCcch--hhHhccCC
Confidence            999999999999999999999999999999987655 899999988878999887654  5555666542  24578899


Q ss_pred             EEEEE-eccc---cHHHHHHHHHHHHHCCCeEEEeCCchHHH----hhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          173 WLVLR-FGMF---NFEVIQAAIRIAKQEGLSVSMDLASFEMV----RNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       173 ~v~~~-~~~~---~~~~~~~~~~~a~~~g~~i~~D~~~~~~~----~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      ++|++ +.+.   +.+.+.++++.+++.|++++||++.....    +.+.+.+.++++  ++|++++|++|++.|+|
T Consensus       144 ~v~~~~~~l~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~--~~dil~~N~~Ea~~l~g  218 (339)
T 1tyy_A          144 WFYFSSIGLTDRPAREACLEGARRMREAGGYVLFDVNLRSKMWGNTDEIPELIARSAA--LASICKVSADELCQLSG  218 (339)
T ss_dssp             EEEEEHHHHSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCSCGGGHHHHHHHHHH--HCSEEEEEHHHHHHHHC
T ss_pred             EEEEcchhhcCcccHHHHHHHHHHHHHcCCEEEEeCCCCccccCCHHHHHHHHHHHHh--hCCEEecCHHHHHHHhC
Confidence            99998 4321   34677889999999999999999754210    122345666777  99999999999999875

>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A*

Probab=99.94  E-value=2.7e-26  Score=196.15  Aligned_cols=200  Identities=15%  Similarity=0.159  Sum_probs=153.5

Q ss_pred             CeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCC
Q 026265           16 ALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGV   95 (241)
Q Consensus        16 ~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~   95 (241)
                      .+|+++| ++++|+++.+++.+++++-.  +..            .....  ..........+||+++|+|++++ +||.
T Consensus        11 m~i~v~G-~~~~D~~~~~~~~~~~~~~~--~~~------------~~~~~--~~~~~~~~~~~GG~~~NvA~~la-~LG~   72 (334)
T 2pkf_A           11 MTIAVTG-SIATDHLMRFPGRFSEQLLP--EHL------------HKVSL--SFLVDDLVMHRGGVAGNMAFAIG-VLGG   72 (334)
T ss_dssp             SEEEEES-CCEEEEEEECSSCTHHHHTT--SCG------------GGCCC--CCCCSEEEEEEECHHHHHHHHHH-HTTC
T ss_pred             CeEEEEC-ChhheEEEecChHHhhhhch--hhc------------ccccc--ccccccceecCCChHHHHHHHHH-HcCC
Confidence            4799999 99999999985433333310  000            00000  00123577899999999999999 8999


Q ss_pred             ceeEEeeecCChhHHHHHHHHHhCCceeeceeecCC-CceeEEEEEcCCCCeeeeeCccccCCCCcccCChh--hhCCcc
Q 026265           96 PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAE--DVKGSK  172 (241)
Q Consensus        96 ~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~-~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~~~--~i~~~~  172 (241)
                      ++.++|.+|+| +|+ +++.|++.||+++++.+.++ +|+.++++++++|+|++.+++++...++++++...  .+++++
T Consensus        73 ~~~~i~~vG~D-~g~-i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~~~~~~~~~~~~~l~~~~  150 (334)
T 2pkf_A           73 EVALVGAAGAD-FAD-YRDWLKARGVNCDHVLISETAHTARFTCTTDVDMAQIASFYPGAMSEARNIKLADVVSAIGKPE  150 (334)
T ss_dssp             EEEEECEECGG-GHH-HHHHHHTTTEECTTCEECSSCCCEEEEEEECTTCCEEEEEECGGGGGGGGCCHHHHHHHHCSCS
T ss_pred             CeEEEEEEeCc-hHH-HHHHHHHCCCceeeeEecCCCCceEEEEEEcCCCCEEEEECCchhhhCCHhhcChhhhhhcCCC
Confidence            99999999999 899 99999999999999887654 89999999988899988777777666666665432  358999


Q ss_pred             EEEEEeccccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhc-hhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          173 WLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNF-RTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       173 ~v~~~~~~~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~-~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      ++|++..  .++.+.++++.+++.|++++||++....  .+ .+.+.++++  ++|++++|++|++.|+|
T Consensus       151 ~v~~~~~--~~~~~~~~~~~a~~~g~~v~~D~~~~~~--~~~~~~l~~~l~--~~dil~~N~~E~~~l~g  214 (334)
T 2pkf_A          151 LVIIGAN--DPEAMFLHTEECRKLGLAFAADPSQQLA--RLSGEEIRRLVN--GAAYLFTNDYEWDLLLS  214 (334)
T ss_dssp             EEEEESC--CHHHHHHHHHHHHHHTCCEEEECGGGGG--TSCHHHHHTTTT--TCSEEEEEHHHHHHHHH
T ss_pred             EEEEcCC--ChHHHHHHHHHHHhcCCeEEEeccchhh--hhhHHHHHHHHh--cCCEEecCHHHHHHHhc
Confidence            9999943  3577888899999999999999976421  11 244667787  89999999999998864

>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728}

Probab=99.94  E-value=1.3e-26  Score=195.74  Aligned_cols=183  Identities=15%  Similarity=0.170  Sum_probs=145.1

Q ss_pred             CCCCeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhh
Q 026265           13 SQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVG   92 (241)
Q Consensus        13 ~~~~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~   92 (241)
                      .+..+|+++| ++++|++..+     +++|  .|....                    .......+||+++|+|++++ +
T Consensus        18 ~~~~~v~viG-~~~iD~~~~~-----~~~p--~g~~~~--------------------~~~~~~~~GG~~~NvA~~la-~   68 (306)
T 3bf5_A           18 QGMRFLAYFG-HLNIDVLISV-----DSIP--REGSVN--------------------VKDLRPRFGGTAGNFAIVAQ-K   68 (306)
T ss_dssp             -CCEEEEEEC-CCEEEEEEEC-----SCCC--SSEEEE--------------------CSEEEEEEEHHHHHHHHHHH-H
T ss_pred             cCCCcEEEEC-CceEEEEEec-----CCCC--CCceEE--------------------CcceEecCCChHHHHHHHHH-H
Confidence            3457899999 9999999998     4565  343221                    12577899999999999999 8


Q ss_pred             cCCceeEEeeecCChhHHHHHHHHHhCCceeeceeecCC-CceeEEEEEcCCCCeeeeeCccccCCCCcccCChhhhCCc
Q 026265           93 FGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGS  171 (241)
Q Consensus        93 LG~~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~-~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~~~~i~~~  171 (241)
                      ||.++.++|.+|+| +|+++++.|++.||+++++.+.++ +|+.+++++++ |+|+++.+.++...++ +++.    +++
T Consensus        69 LG~~~~~i~~vG~D-~G~~i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~-g~r~~~~~~ga~~~~~-~~l~----~~~  141 (306)
T 3bf5_A           69 FRIPFDLYSAVGMK-THREYLAMIESMGINTGHVEKFEDESGPICYIATDG-KKQVSFMHQGAMAAWA-PQLA----DEY  141 (306)
T ss_dssp             TTCCCEEEEEEETT-TCHHHHHHHHHTTCCCTTEEEETTCCCSEEEEEECS-SCEEEEEECTHHHHCC-CCCC----SCE
T ss_pred             cCCCeEEEEEEeCC-hHHHHHHHHHHcCCCchheEecCCCCCceEEEEEcC-CeeEEEEeCChhhhhh-Hhhc----CCC
Confidence            99999999999999 999999999999999999876544 79999999987 9999988888766666 4443    789


Q ss_pred             cEEEEEeccccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          172 KWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       172 ~~v~~~~~~~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      +++|++...    .+.++++.+++   +++||+++... ...++.+.++++  ++|++++|++|++.|+|
T Consensus       142 ~~v~~~~~~----~~~~~~~~a~~---~v~~D~~~~~~-~~~~~~~~~~l~--~~dil~~N~~E~~~l~g  201 (306)
T 3bf5_A          142 EYVHFSTGP----NYLDMAKSIRS---KIIFDPSQEIH-KYSKDELKKFHE--ISYMSIFNDHEYRVFRE  201 (306)
T ss_dssp             EEEEECSSS----SHHHHHHHCCS---EEEECCGGGGG-GSCHHHHHHHHH--HCSEEEEEHHHHHHHHH
T ss_pred             CEEEECChH----HHHHHHHHhCC---cEEEcCchhhh-hccHHHHHHHHh--cCCEEEcCHHHHHHHhC
Confidence            999999432    45666766654   99999985321 111345667777  99999999999998864

>4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601}

Probab=99.93  E-value=2.3e-25  Score=191.38  Aligned_cols=193  Identities=19%  Similarity=0.225  Sum_probs=143.9

Q ss_pred             CCCeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhc
Q 026265           14 QAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGF   93 (241)
Q Consensus        14 ~~~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~L   93 (241)
                      ...+|+++| .+++|+...-+      .|+                         .....+...+||+++|+|++|+ ||
T Consensus        23 mm~kv~~~G-E~m~~l~p~~~------~~~-------------------------~~~~~~~~~~GG~~aNvA~~la-rL   69 (351)
T 4gm6_A           23 MMKQVVTIG-ELLMRLSTQQG------IPF-------------------------SQTTALDIHIGGAEANVAVNLS-KL   69 (351)
T ss_dssp             --CEEEEEC-CCEEEEECCTT------CCG-------------------------GGCSEEEEEEECHHHHHHHHHH-HT
T ss_pred             ccCCEEEEc-ceeEEecCCCC------CCc-------------------------cccCeEEEecCChHHHHHHHHH-Hc
Confidence            346899999 99999864331      111                         1123688999999999999999 89


Q ss_pred             CCceeEEeeecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEEE-cCCCCeeeeeCccc--cCCCCcccCC-hhhhC
Q 026265           94 GVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLV-DASGNRTMRPCLSN--AVKIQADELI-AEDVK  169 (241)
Q Consensus        94 G~~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~-~~~g~r~~~~~~g~--~~~l~~~~~~-~~~i~  169 (241)
                      |.++.++|.||+|.+|+++++.|+++||+++++.+.+++++.+++.. +..+++.+..+...  ...+...++. .+.++
T Consensus        70 G~~~~~ig~vG~D~~G~~l~~~L~~~GVdt~~v~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~d~~~~~~~~  149 (351)
T 4gm6_A           70 GHPTRIATVVPANPIGKMAVEHLWRHQVDTAFVVEAGDRLGTYYLESGTALKAPSVVYDRQHSSFARHKSMDWDLSELLK  149 (351)
T ss_dssp             TCCEEEEEEECSSHHHHHHHHHHHHTTEECTTEEECSSCCCEEEEECCBTTBCCEEEEECTTCHHHHCCCCCCCHHHHHT
T ss_pred             CCCeEEEEEeCCCHHHHHHHHHHHHcCCCcccccccCCccceeEEEEccCCcceEEEEccccchhhhCCccccCHHHHHh
Confidence            99999999999999999999999999999999998877555555444 44555555544332  2234444444 45789


Q ss_pred             CccEEEEE-ecc-c---cHHHHHHHHHHHHHCCCeEEEeCCchHH---HhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          170 GSKWLVLR-FGM-F---NFEVIQAAIRIAKQEGLSVSMDLASFEM---VRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       170 ~~~~v~~~-~~~-~---~~~~~~~~~~~a~~~g~~i~~D~~~~~~---~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      +++++|++ +.+ .   +.+.+.++++.+++.|++++||++.+..   .+..++.+.++++  ++|++++|++|++.|+|
T Consensus       150 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~ak~~g~~v~~D~n~r~~lw~~~~~~~~~~~~l~--~~dil~~N~~Ea~~l~g  227 (351)
T 4gm6_A          150 GIRVLHVSGITIALSTFWLEMVVKIIREAKRNGIKISFDMNYRAKLWELEAAKRAYQQLLP--LVDYCSAGQMDAVAFFE  227 (351)
T ss_dssp             TEEEEEEEHHHHHHCHHHHHHHHHHHHHHHHTTCEEEEECCCCTTTSCHHHHHHHHHHHGG--GCSEEECCHHHHHHTSC
T ss_pred             hcccceecccchhhchhHHHHHHHHHHHHHHcCCCcccCCCcCchhhhhhhHHHHHHHHHH--hCCccccCHHHHHHHhC
Confidence            99999999 322 1   2467889999999999999999974321   1233455667787  99999999999998875

>3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A*

Probab=99.93  E-value=3.6e-25  Score=186.94  Aligned_cols=184  Identities=22%  Similarity=0.230  Sum_probs=146.4

Q ss_pred             CeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCC
Q 026265           16 ALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGV   95 (241)
Q Consensus        16 ~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~   95 (241)
                      ++|+++++|+++|+++.+     +++  +.|....                    ..+....+||+++|+|++++ +||.
T Consensus         2 ~~i~~v~~n~~~D~~~~v-----~~~--~~g~~~~--------------------~~~~~~~~GG~~~NvA~~la-~LG~   53 (309)
T 3umo_A            2 VRIYTLTLAPSLDSATIT-----PQI--YPEGKLR--------------------CTAPVFEPGGGGINVARAIA-HLGG   53 (309)
T ss_dssp             CCEEEECSSCEEEEEEEE-----SCC--CSSSEEE--------------------CCCCEEEEESHHHHHHHHHH-HTTC
T ss_pred             CcEEEEecchhheEEEEc-----Ccc--cCCCeEE--------------------eceeeecCCchHHHHHHHHH-HcCC
Confidence            468888779999999999     455  3444332                    24788999999999999999 8999


Q ss_pred             ceeEEeeecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEEEc-CCCCeeeeeCccccCCCCcccCCh-----hhhC
Q 026265           96 PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVD-ASGNRTMRPCLSNAVKIQADELIA-----EDVK  169 (241)
Q Consensus        96 ~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~~-~~g~r~~~~~~g~~~~l~~~~~~~-----~~i~  169 (241)
                      ++.++|.+|+| +|+++++.|+++||+++++...+ +|++++++++ ++|+|+++.++++  .+++++++.     +.+.
T Consensus        54 ~~~~i~~vG~d-~g~~i~~~l~~~gv~~~~v~~~~-~t~~~~~~~~~~~g~~~~~~~~g~--~~~~~~~~~~~~~~~~~~  129 (309)
T 3umo_A           54 SATAIFPAGGA-TGEHLVSLLADENVPVATVEAKD-WTRQNLHVHVEASGEQYRFVMPGA--ALNEDEFRQLEEQVLEIE  129 (309)
T ss_dssp             CEEEEEEECHH-HHHHHHHHHHHTTCCEEEEECSS-CCCCCEEEEETTTCCEEEEECCCC--CCCHHHHHHHHHHHTTSC
T ss_pred             CeEEEEEecCc-hHHHHHHHHHHcCCceEEEEecC-CCeeEEEEEECCCCcEEEEEcCCC--CCCHHHHHHHHHHHHhcC
Confidence            99999999998 99999999999999999887653 5666666555 4789998888775  366665531     1246


Q ss_pred             CccEEEEEecc---ccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCC--ccEEecCHHHHHhhhC
Q 026265          170 GSKWLVLRFGM---FNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGD--VDLCFANEDEAAELVR  241 (241)
Q Consensus       170 ~~~~v~~~~~~---~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~--~d~l~~N~~Ea~~l~g  241 (241)
                      .++++|++..+   .+.+.+.++++.+++.|++++||+++.        .+.++++  +  +|++++|++|++.|+|
T Consensus       130 ~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~v~~D~~~~--------~l~~~l~--~~~~dil~~N~~E~~~l~g  196 (309)
T 3umo_A          130 SGAILVISGSLPPGVKLEKLTQLISAAQKQGIRCIVDSSGE--------ALSAALA--IGNIELVKPNQKELSALVN  196 (309)
T ss_dssp             TTCEEEEESCCCTTCCHHHHHHHHHHHHHTTCEEEEECCHH--------HHHHHTS--SCCBSEECCBHHHHHHHHT
T ss_pred             CCCEEEEEccCCCCCCHHHHHHHHHHHHhcCCEEEEECCcH--------HHHHHhc--cCCCeEEEeCHHHHHHHhC
Confidence            78899999432   246889999999999999999999743        3556666  5  6999999999999875

>3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A*

Probab=99.93  E-value=9.4e-25  Score=184.42  Aligned_cols=183  Identities=23%  Similarity=0.227  Sum_probs=142.7

Q ss_pred             eEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCCc
Q 026265           17 LILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVP   96 (241)
Q Consensus        17 ~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~~   96 (241)
                      +|+++++++++|+++.++     + + ..|....                    .......+||+++|+|++++ +||.+
T Consensus         3 ~I~~v~g~~~~D~~~~~~-----~-~-~~g~~~~--------------------~~~~~~~~GG~~~NvA~~la-~LG~~   54 (309)
T 3cqd_A            3 RIYTLTLAPSLDSATITP-----Q-I-YPEGKLR--------------------CTAPVFEPGGGGINVARAIA-HLGGS   54 (309)
T ss_dssp             CEEEECSSCEEEEEEEES-----C-C-CSSSEEE--------------------CCCCEEEEESHHHHHHHHHH-HTTCC
T ss_pred             eEEEEeccchheEEEEcC-----C-C-cCCCeee--------------------ccceeecCCchHHHHHHHHH-HcCCC
Confidence            588665599999999994     3 2 3444332                    13688999999999999999 89999


Q ss_pred             eeEEeeecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEE-EcCCCCeeeeeCccccCCCCcccCCh------hhhC
Q 026265           97 CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCL-VDASGNRTMRPCLSNAVKIQADELIA------EDVK  169 (241)
Q Consensus        97 ~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~-~~~~g~r~~~~~~g~~~~l~~~~~~~------~~i~  169 (241)
                      +.++|.+|+| +|+++++.|++.||+++++.+.+ .|++++++ ++++|+|+++..+++  .+++++++.      +.++
T Consensus        55 ~~~i~~vG~d-~g~~i~~~l~~~gv~~~~v~~~~-~t~~~~~~~~~~~g~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~  130 (309)
T 3cqd_A           55 ATAIFPAGGA-TGEHLVSLLADENVPVATVEAKD-WTRQNLHVHVEASGEQYRFVMPGA--ALNEDEFRQLEEQVLEIES  130 (309)
T ss_dssp             EEEEEEECHH-HHHHHHHHHHHTTCCEEEEECSS-CCCCCEEEEETTTCCEEEEECCCC--CCCHHHHHHHHHHHHTSCT
T ss_pred             eEEEEEecCc-hHHHHHHHHHHcCCCceeEEcCC-CCeeEEEEEEcCCCCEEEEEcCCC--CCCHHHHHHHHHHHHHhhc
Confidence            9999999997 99999999999999999987664 47777777 888898877766664  356554431      2367


Q ss_pred             CccEEEEEecc---ccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCc-cEEecCHHHHHhhhC
Q 026265          170 GSKWLVLRFGM---FNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDV-DLCFANEDEAAELVR  241 (241)
Q Consensus       170 ~~~~v~~~~~~---~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~-d~l~~N~~Ea~~l~g  241 (241)
                      + +++|+++.+   .+.+.+.++++.+++.|+++++|+++..        +.+.+. +.+ |++++|++|++.|+|
T Consensus       131 ~-~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~--------~~~~l~-~~~~dil~~N~~E~~~l~g  196 (309)
T 3cqd_A          131 G-AILVISGSLPPGVKLEKLTQLISAAQKQGIRCIVDSSGEA--------LSAALA-IGNIELVKPNQKELSALVN  196 (309)
T ss_dssp             T-CEEEEESCCCTTCCHHHHHHHHHHHHTTTCEEEEECCHHH--------HHHHTT-TCCBSEECCBHHHHHHHHT
T ss_pred             C-CEEEEECCCCCCCCHHHHHHHHHHHHHcCCeEEEECChHH--------HHHHHH-hCCCEEEeeCHHHHHHHhC
Confidence            7 999999432   2367888999999999999999997531        233332 288 999999999998875

>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A*

Probab=99.93  E-value=3.8e-25  Score=187.21  Aligned_cols=186  Identities=17%  Similarity=0.228  Sum_probs=144.5

Q ss_pred             eEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCCc
Q 026265           17 LILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVP   96 (241)
Q Consensus        17 ~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~~   96 (241)
                      +|+++| ++++|++...+           |..                    .........+||+++|+|++++ +||.+
T Consensus         3 ~v~viG-~~~~D~~~~~~-----------~~~--------------------~~~~~~~~~~GG~~~N~A~~la-~LG~~   49 (313)
T 2v78_A            3 DVIALG-EPLIQFNSFNP-----------GPL--------------------RFVNYFEKHVAGSELNFCIAVV-RNHLS   49 (313)
T ss_dssp             CEEEEC-CCEEEEEESSS-----------SCG--------------------GGCCEEEEEEECHHHHHHHHHH-HTTCC
T ss_pred             eEEEEC-cceEEEecCCC-----------Ccc--------------------cccceeEecCCChHHHHHHHHH-HCCCc
Confidence            699999 99999986321           100                    0013678899999999999999 89999


Q ss_pred             eeEEeeecCChhHHHHHHHHHhCCceeeceeecCC-CceeEEEE--EcCCCCeeeeeCc--cccCCCCcccCChhhhCCc
Q 026265           97 CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCL--VDASGNRTMRPCL--SNAVKIQADELIAEDVKGS  171 (241)
Q Consensus        97 ~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~-~T~~~~~~--~~~~g~r~~~~~~--g~~~~l~~~~~~~~~i~~~  171 (241)
                      +.++|.+|+|.+|+++++.|++.||+++++.+.++ +|+.+++.  ++++|+|++.++.  ++...++++++..+.++++
T Consensus        50 ~~~i~~vG~D~~g~~~~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~~~g~~~~~~~~~~~a~~~l~~~~~~~~~~~~~  129 (313)
T 2v78_A           50 CSLIARVGNDEFGKNIIEYSRAQGIDTSHIKVDNESFTGIYFIQRGYPIPMKSELVYYRKGSAGSRLSPEDINENYVRNS  129 (313)
T ss_dssp             EEEEEEEESSHHHHHHHHHHHHTTCBCTTEEEETTSCCCEEEEEESSSSTTCEEEEEECTTCSGGGCCGGGCCHHHHHTS
T ss_pred             EEEEEEeCCCHHHHHHHHHHHHcCCcCceEEEcCCCCceEEEEEEecCCCCCeeEEEeCCcChhHhCChhhCCHHHhcCC
Confidence            99999999999999999999999999999887655 89999998  8878999887554  5567788888887778899


Q ss_pred             cEEEEE-ecc----ccHHHHHHHHHHHHHCCCeEEEeCCchHH----HhhchhhHHhhhcCCCcc--EEecCHHHHHhhh
Q 026265          172 KWLVLR-FGM----FNFEVIQAAIRIAKQEGLSVSMDLASFEM----VRNFRTPLLQLLESGDVD--LCFANEDEAAELV  240 (241)
Q Consensus       172 ~~v~~~-~~~----~~~~~~~~~~~~a~~~g~~i~~D~~~~~~----~~~~~~~l~~~l~~~~~d--~l~~N~~Ea~~l~  240 (241)
                      +++|++ +..    .+.+.+.++++.+++.    +||++....    ....++.+.++++  ++|  ++++|++|++.|+
T Consensus       130 ~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~----~~D~~~~~~~~~~~~~~~~~~~~~l~--~~d~~il~~N~~E~~~l~  203 (313)
T 2v78_A          130 RLVHSTGITLAISDNAKEAVIKAFELAKSR----SLDTNIRPKLWSSLEKAKETILSILK--KYDIEVLITDPDDTKILL  203 (313)
T ss_dssp             SEEEEEHHHHHHCHHHHHHHHHHHHHCSSE----EEECCCCGGGSSCHHHHHHHHHHHHH--HSCEEEEEECHHHHHHHH
T ss_pred             CEEEEcCchhhcChHHHHHHHHHHHHHHHh----CcCCcCChhhcCCHHHHHHHHHHHHH--hcCeeEEECcHHHHHHHh
Confidence            999999 322    1235556666665543    899975321    0122345666777  899  9999999999887


Q ss_pred             C
Q 026265          241 R  241 (241)
Q Consensus       241 g  241 (241)
                      |
T Consensus       204 g  204 (313)
T 2v78_A          204 D  204 (313)
T ss_dssp             S
T ss_pred             C
Confidence            5

>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A*

Probab=99.92  E-value=1.2e-24  Score=184.01  Aligned_cols=189  Identities=22%  Similarity=0.250  Sum_probs=143.4

Q ss_pred             CeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCC
Q 026265           16 ALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGV   95 (241)
Q Consensus        16 ~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~   95 (241)
                      .+|+++| ++++|++...+           |..                    .........+||+++|+|++++ +||.
T Consensus         2 ~~v~viG-~~~~D~~~~~~-----------~~~--------------------~~~~~~~~~~GG~~~NvA~~la-~LG~   48 (311)
T 2dcn_A            2 AKLITLG-EILIEFNALSP-----------GPL--------------------RHVSYFEKHVAGSEANYCVAFI-KQGN   48 (311)
T ss_dssp             CEEEEES-CCEEEEEESSS-----------SCG--------------------GGCCEEEEEEECHHHHHHHHHH-HTTC
T ss_pred             CCEEEEC-CceEEEecCCC-----------Ccc--------------------cccceeeecCCChHHHHHHHHH-HCCC
Confidence            3799999 99999987331           100                    0013678899999999999999 8999


Q ss_pred             ceeEEeeecCChhHHHHHHHHHhCCceeeceeecCC-CceeEEEEEcCCCC--eeeeeCc--cccCCCCcccCChhhhCC
Q 026265           96 PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGN--RTMRPCL--SNAVKIQADELIAEDVKG  170 (241)
Q Consensus        96 ~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~-~T~~~~~~~~~~g~--r~~~~~~--g~~~~l~~~~~~~~~i~~  170 (241)
                      ++.++|.+|+|.+|+++++.|++.||+++++.+.++ +|+.++++++++|+  |+++++.  ++...++++++..+.+++
T Consensus        49 ~~~~~~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~  128 (311)
T 2dcn_A           49 ECGIIAKVGDDEFGYNAIEWLRGQGVDVSHMKIDPSAPTGIFFIQRHYPVPLKSESIYYRKGSAGSKLSPEDVDEEYVKS  128 (311)
T ss_dssp             EEEEECEEESSHHHHHHHHHHHHTTCBCTTCEEETTSCCCEEEEEESCSSTTCEEEEEECTTCTGGGCCGGGCCHHHHTT
T ss_pred             ceEEEEEeCCCHHHHHHHHHHHHcCCCcceEEEcCCCCceEEEEEECCCCCccceEEEecCcChhhhCChhhcChHHHcC
Confidence            999999999999999999999999999999887655 89999999988888  8877553  556778888888777899


Q ss_pred             ccEEEEE-ecc----ccHHHHHHHHHHHHHCCCeEEEeCCchHHH---hhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          171 SKWLVLR-FGM----FNFEVIQAAIRIAKQEGLSVSMDLASFEMV---RNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       171 ~~~v~~~-~~~----~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~---~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      ++++|++ +..    .+.+.+.++++.+++.    +||++.....   +..++.+.++++..++|++++|++|++.|+|
T Consensus       129 ~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~----~~D~~~~~~~~~~~~~~~~~~~~l~~~~~dil~~N~~E~~~l~g  203 (311)
T 2dcn_A          129 ADLVHSSGITLAISSTAKEAVYKAFEIASNR----SFDTNIRLKLWSAEEAKREILKLLSKFHLKFLITDTDDSKIILG  203 (311)
T ss_dssp             CSEEEEEHHHHHSCHHHHHHHHHHHHHCSSE----EEECCCCTTTSCHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHS
T ss_pred             CCEEEEeCcccccChHHHHHHHHHHHHHHHh----CcCccCchhhCChHHHHHHHHHHHhhcCCcEEECCHHHHHHHhC
Confidence            9999999 322    1235566666665543    8999753100   1112334444430178999999999998875

>2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1

Probab=99.92  E-value=1e-24  Score=186.02  Aligned_cols=189  Identities=14%  Similarity=0.168  Sum_probs=146.8

Q ss_pred             CCeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcC
Q 026265           15 AALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFG   94 (241)
Q Consensus        15 ~~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG   94 (241)
                      ...++++| ++++|+++.++     + | ..|....++                 ++......+||+++|+|++++ +||
T Consensus        12 ~~~~~v~G-~~~vD~~~~~~-----~-~-~~g~~~~~s-----------------~~~~~~~~~GG~~~NvA~~la-~LG   65 (331)
T 2ajr_A           12 HMVLTVTL-NPALDREIFIE-----D-F-QVNRLYRIN-----------------DLSKTQMSPGGKGINVSIALS-KLG   65 (331)
T ss_dssp             CCEEEEES-SCEEEEEEECT-----T-C-CSSCEEECC-----------------SGGGEEEEEESHHHHHHHHHH-HTT
T ss_pred             ceEEEEec-chHHeEEEEcC-----C-c-cCCceEEec-----------------cccceEEecCcHHHHHHHHHH-HcC
Confidence            45799999 99999999994     4 3 345443321                 012678899999999999999 899


Q ss_pred             CceeEEeeecCChhHHHHHHHHHhCC--ceeeceeecCCCceeEEEEEcCCCCe-eeeeCccccCCCCcccCCh------
Q 026265           95 VPCGLIGAYGDDQQGQLFVSNMQFSG--VDVSRLRMKRGPTGQCVCLVDASGNR-TMRPCLSNAVKIQADELIA------  165 (241)
Q Consensus        95 ~~~~~vg~vG~D~~g~~i~~~l~~~g--vd~~~~~~~~~~T~~~~~~~~~~g~r-~~~~~~g~~~~l~~~~~~~------  165 (241)
                      .++.++|.+|+| +|+++++.|++.|  |+++++.+.+ .|++++++++++|+| +++..+++  .+++++++.      
T Consensus        66 ~~~~~~~~vG~d-~G~~i~~~L~~~g~~V~~~~v~~~~-~t~~~~~~v~~~g~~~~~~~~~g~--~l~~~~~~~~~~~~~  141 (331)
T 2ajr_A           66 VPSVATGFVGGY-MGKILVEELRKISKLITTNFVYVEG-ETRENIEIIDEKNKTITAINFPGP--DVTDMDVNHFLRRYK  141 (331)
T ss_dssp             CCEEEEEEEEHH-HHHHHHHHHHHHCTTEEEEEEEESS-CCEEEEEEEETTTTEEEEEECCCC--CCCHHHHHHHHHHHH
T ss_pred             CCeEEEEEecCc-hHHHHHHHHHHcCCccceEEEEcCC-CCeEEEEEEeCCCceEEEEeCCCC--CCCHHHHHHHHHHHH
Confidence            999999999998 9999999999999  9999888764 589999888878888 66656664  366655432      


Q ss_pred             hhhCCccEEEEEecc---ccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcC-CCccEEecCHHH-HHhhh
Q 026265          166 EDVKGSKWLVLRFGM---FNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLES-GDVDLCFANEDE-AAELV  240 (241)
Q Consensus       166 ~~i~~~~~v~~~~~~---~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~-~~~d~l~~N~~E-a~~l~  240 (241)
                      +.+++++++|+++.+   .+.+.+.++++.+++.|++++||+++.        .+.+++++ +++|++++|++| ++.|+
T Consensus       142 ~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~--------~~~~~l~~~~~~dil~~N~~E~~~~l~  213 (331)
T 2ajr_A          142 MTLSKVDCVVISGSIPPGVNEGICNELVRLARERGVFVFVEQTPR--------LLERIYEGPEFPNVVKPDLRGNHASFL  213 (331)
T ss_dssp             HHHTTCSEEEEESCCCTTSCTTHHHHHHHHHHHTTCEEEEECCHH--------HHHHHHHSSCCCSEECCCCTTCCSCBT
T ss_pred             HhcccCCEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECChH--------HHHHHHhcCCCCeEEEeCccchHHHHh
Confidence            346899999998432   124678889999999999999999853        23334431 148999999999 88776


Q ss_pred             C
Q 026265          241 R  241 (241)
Q Consensus       241 g  241 (241)
                      |
T Consensus       214 g  214 (331)
T 2ajr_A          214 G  214 (331)
T ss_dssp             T
T ss_pred             C
Confidence            4

>2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A*

Probab=99.92  E-value=7.3e-24  Score=180.15  Aligned_cols=185  Identities=15%  Similarity=0.162  Sum_probs=143.1

Q ss_pred             CeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCC
Q 026265           16 ALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGV   95 (241)
Q Consensus        16 ~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~   95 (241)
                      ..++++| ++++|+++.++     + | ..|....+                    ......+||+++|+|++++ +||.
T Consensus         3 m~i~v~g-~~~~D~~~~v~-----~-~-~~g~~~~~--------------------~~~~~~~GG~~~NvA~~la-~LG~   53 (323)
T 2f02_A            3 LIVTVTM-NPSIDISYLLD-----H-L-KLDTVNRT--------------------SQVTKTPGGKGLNVTRVIH-DLGG   53 (323)
T ss_dssp             CEEEEES-SCEEEEEEECS-----C-C-CTTSEEEE--------------------SCEEEEEESHHHHHHHHHH-HHTC
T ss_pred             eEEEEec-CceeEEEEecC-----C-c-ccCCEEEe--------------------ceEEEcCCcHHHHHHHHHH-HcCC
Confidence            4689999 99999999994     4 3 34443332                    2678999999999999999 8999


Q ss_pred             ceeEEeeecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEEEcCCCCeeeeeCccccCCCCcccCCh------hhhC
Q 026265           96 PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA------EDVK  169 (241)
Q Consensus        96 ~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~~------~~i~  169 (241)
                      ++.++|.+|+ ++|+++++.|++.||+++++.+.+ .|++++++++++ +|+++..+++  .+++++++.      +.++
T Consensus        54 ~~~~~~~vG~-~~G~~i~~~L~~~gV~~~~v~~~~-~t~~~~~~~~~~-~~~~~~~~g~--~l~~~~~~~~~~~~~~~~~  128 (323)
T 2f02_A           54 DVIATGVLGG-FHGAFIANELKKANIPQAFTSIKE-ETRDSIAILHEG-NQTEILEAGP--TVSPEEISNFLENFDQLIK  128 (323)
T ss_dssp             CEEEEEEEEH-HHHHHHHHHHHHTTCCBCCEEESS-CCEEEEEEEETT-EEEEEEECCC--BCCHHHHHHHHHHHHHHHT
T ss_pred             CeEEEEEecc-chHHHHHHHHHHCCCceeEEEcCC-CCeeEEEEEcCC-CeEEEECCCC--CCCHHHHHHHHHHHHHhcc
Confidence            9999999996 699999999999999999888764 588888888765 6666555554  466655432      2468


Q ss_pred             CccEEEEEecc---ccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          170 GSKWLVLRFGM---FNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       170 ~~~~v~~~~~~---~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      ++|++|+++.+   .+.+.+.++++.+++.|++++||+++.    .+++.+.. ++  ++|++++|++|++.|+|
T Consensus       129 ~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~----~~~~~l~~-~~--~~dil~~N~~E~~~l~g  196 (323)
T 2f02_A          129 QAEIVTISGSLAKGLPSDFYQELVQKAHAQEVKVLLDTSGD----SLRQVLQG-PW--KPYLIKPNLEELEGLLG  196 (323)
T ss_dssp             TCSEEEEESCCCBTSCTTHHHHHHHHHHHTTCEEEEECCTH----HHHHHHHS-SC--CCSEECCBHHHHHHHHT
T ss_pred             CCCEEEEECCCCCCCChHHHHHHHHHHHHCCCEEEEECChH----HHHHHHhc-cC--CCeEEecCHHHHHHHhC
Confidence            99999998332   134678889999999999999999854    22222221 14  89999999999999875

>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A*

Probab=99.92  E-value=9.3e-24  Score=180.07  Aligned_cols=182  Identities=17%  Similarity=0.219  Sum_probs=140.5

Q ss_pred             EEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCCce
Q 026265           18 ILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVPC   97 (241)
Q Consensus        18 v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~~~   97 (241)
                      ++++| ++++|+++.++     ++  ..|.....                    ......+||+++|+|++++ +||.++
T Consensus        23 ~~v~G-~~~~D~~~~~~-----~~--~~g~~~~~--------------------~~~~~~~GG~~~NvA~~la-~LG~~~   73 (330)
T 2jg1_A           23 LTLTL-NPSVDISYPLT-----AL--KLDDVNRV--------------------QEVSKTAGGKGLNVTRVLA-QVGEPV   73 (330)
T ss_dssp             EEEES-SCEEEEEEEES-----CC--CTTSEEEE--------------------SCCEEEEECHHHHHHHHHH-HHTCCE
T ss_pred             EEEec-chhheEEEecC-----Cc--cCCceEEe--------------------ceEEEcCCchHHHHHHHHH-HhCCCe
Confidence            44667 99999999994     33  34443321                    2678899999999999999 899999


Q ss_pred             eEEeeecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEEEcCCCCeeeeeCccccCCCCcccCCh------hhhCCc
Q 026265           98 GLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA------EDVKGS  171 (241)
Q Consensus        98 ~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~~------~~i~~~  171 (241)
                      .++|.+|+ .+|+++++.|++.||+++++.+.+ .|++++++++++ +|+++..+++  .+++++++.      +.++++
T Consensus        74 ~~i~~vG~-~~G~~l~~~L~~~gV~~~~v~~~~-~t~~~~~~v~~~-~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~  148 (330)
T 2jg1_A           74 LASGFIGG-ELGQFIAKKLDHADIKHAFYNIKG-ETRNCIAILHEG-QQTEILEQGP--EIDNQEAAGFIKHFEQMMEKV  148 (330)
T ss_dssp             EEEEEEEH-HHHHHHHHHHHHTTCEECCEEESS-CCEEEEEEEETT-EEEEEEECCC--BCCHHHHHHHHHHHHHHGGGC
T ss_pred             EEEEEecc-hhHHHHHHHHHHCCCceeEEEccC-CCeeEEEEEeCC-CcEEEECCCC--CCCHHHHHHHHHHHHHhcCCC
Confidence            99999996 799999999999999999988764 589999988865 6766555554  466555432      236889


Q ss_pred             cEEEEEecc---ccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcC-CCccEEecCHHHHHhhhC
Q 026265          172 KWLVLRFGM---FNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLES-GDVDLCFANEDEAAELVR  241 (241)
Q Consensus       172 ~~v~~~~~~---~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~-~~~d~l~~N~~Ea~~l~g  241 (241)
                      |++|++..+   .+.+.+.++++.+++.|++++||+++.        .+.+++++ +++|++++|++|++.|+|
T Consensus       149 ~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~--------~l~~~l~~~~~~dil~~N~~E~~~l~g  214 (330)
T 2jg1_A          149 EAVAISGSLPKGLNQDYYAQIIERCQNKGVPVILDCSGA--------TLQTVLENPYKPTVIKPNISELYQLLN  214 (330)
T ss_dssp             SEEEEESCCCBTSCTTHHHHHHHHHHTTTCCEEEECCHH--------HHHHHHTSSSCCSEECCBHHHHHHHTT
T ss_pred             CEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCcH--------HHHHHHhccCCceEEEeCHHHHHHHhC
Confidence            999998332   234678889999999999999999753        23334431 179999999999998875

>4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A*

Probab=99.91  E-value=1.4e-24  Score=186.69  Aligned_cols=191  Identities=18%  Similarity=0.144  Sum_probs=138.4

Q ss_pred             CCCCeEEEecCCeeeEEEee--cCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHH
Q 026265           13 SQAALILGLQPAALIDHVAR--VDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLS   90 (241)
Q Consensus        13 ~~~~~v~~iG~~~~vD~~~~--~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la   90 (241)
                      -+..+|+++| ..++|++..  +     +++..+.....+                   ........+||+ +|+|++++
T Consensus        51 ~~~~~ilvvG-~~~~D~~~~g~v-----~r~~p~~p~~~~-------------------~~~~~~~~~GG~-~NvA~~la  104 (352)
T 4e84_A           51 LARSRVLVVG-DVMLDRYWFGNV-----DRISPEAPVPVV-------------------HVQRQEERLGGA-ANVARNAV  104 (352)
T ss_dssp             HTTCEEEEEE-CEEEEEEEEEEE-----EEECSSSSSEEE-------------------EEEEEEEEEEEH-HHHHHHHH
T ss_pred             cCCCcEEEEC-ccceEEEEeecc-----cccCCCCCcceE-------------------EeeEEEEecChH-HHHHHHHH
Confidence            3457899999 999999987  4     233110000000                   012678899997 89999999


Q ss_pred             hhcCCceeEEeeecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEEEcCCCCeeeeeC-ccccCCCCcccCC--hhh
Q 026265           91 VGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPC-LSNAVKIQADELI--AED  167 (241)
Q Consensus        91 ~~LG~~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~~~~g~r~~~~~-~g~~~~l~~~~~~--~~~  167 (241)
                       +||.++.++|.+|+|.+|+++++.|++.||++..+...+.+|+.+++++++++++..+.+ .+.......+.++  .+.
T Consensus       105 -~LG~~v~~ig~vG~D~~G~~i~~~L~~~GV~~~~~~~~~~~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (352)
T 4e84_A          105 -TLGGQAGLLCVVGCDEPGERIVELLGSSGVTPHLERDPALPTTIKLRVLARQQQLLRVDFEAMPTHEVLLAGLARFDVL  183 (352)
T ss_dssp             -HTTCEEEEEEEEESSHHHHHHHHHHTTTSCEEEEEEETTSCCCEEEEEEESSCEEEEEEECCCCCHHHHHHHHHHHHHH
T ss_pred             -HcCCCEEEEEEeCCChhHHHHHHHHHHcCCceeeEECCCCCCceEEEEEcCCceEEEEEcCCCCCHHHHHHHHHHHHHh
Confidence             899999999999999999999999999999995444444489999999986554443332 2221111111111  246


Q ss_pred             hCCccEEEEE-eccccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          168 VKGSKWLVLR-FGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       168 i~~~~~v~~~-~~~~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      ++++|++|++ +...+.+.+.++++.+++.|++++||+++.         .+++++  ++|+++||+.|++.|+|
T Consensus       184 l~~~~~v~~~g~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~---------~~~~l~--~~dil~pN~~Ea~~l~g  247 (352)
T 4e84_A          184 LPQHDVVLMSDYAKGGLTHVTTMIEKARAAGKAVLVDPKGD---------DWARYR--GASLITPNRAELREVVG  247 (352)
T ss_dssp             GGGCSEEEEECCSSSSCSSHHHHHHHHHHTTCEEEEECCSS---------CCSTTT--TCSEECCBHHHHHHHHC
T ss_pred             cccCCEEEEeCCCCCCHHHHHHHHHHHHhcCCEEEEECCCc---------chhhcc--CCcEEcCCHHHHHHHhC
Confidence            8899999999 432233457888999999999999999753         234566  99999999999999875

>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.91  E-value=4.4e-24  Score=179.20  Aligned_cols=159  Identities=14%  Similarity=0.155  Sum_probs=119.1

Q ss_pred             eecCChHHHHHHHHHhhcCCceeEEeeecCChhHHHHHHHHHhCCceeeceeecC-CCceeEEEEEcCCCCeeeeeCccc
Q 026265           76 TIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKR-GPTGQCVCLVDASGNRTMRPCLSN  154 (241)
Q Consensus        76 ~~~GG~~~N~a~~la~~LG~~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~-~~T~~~~~~~~~~g~r~~~~~~g~  154 (241)
                      ..+||+++|+|++++ +||.++.++|.+|+|.+|+++++.|++.||  +++.+.+ .+|+++++.++++|+|++.++.+.
T Consensus        21 ~~~GG~~~N~A~~la-~LG~~~~~~~~vG~D~~g~~~~~~l~~~gv--~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~~~   97 (296)
T 2qhp_A           21 KKIGGAPANFAYHVS-QFGFDSRVVSAVGNDELGDEIMEVFKEKQL--KNQIERVDYPTGTVQVTLDDEGVPCYEIKEGV   97 (296)
T ss_dssp             EEEECHHHHHHHHHH-HTTCEEEEEEEEESSHHHHHHHHHHHHTTC--CEEEEEESSCCEEEEEC------CCEEECSSC
T ss_pred             CCCCCHHHHHHHHHH-HcCCCeeEEEEeCCChHHHHHHHHHHHcCC--CEEeecCCCCceEEEEEECCCCCEEEEEecCC
Confidence            579999999999999 899999999999999999999999999999  6666653 489999998887899888776654


Q ss_pred             -cCCCCcccCChhhhCCccEEEEEe-ccc---cHHHHHHHHHHHHH-CCCeEEEeCCchHHHhhc-hhhHHhhhcCCCcc
Q 026265          155 -AVKIQADELIAEDVKGSKWLVLRF-GMF---NFEVIQAAIRIAKQ-EGLSVSMDLASFEMVRNF-RTPLLQLLESGDVD  227 (241)
Q Consensus       155 -~~~l~~~~~~~~~i~~~~~v~~~~-~~~---~~~~~~~~~~~a~~-~g~~i~~D~~~~~~~~~~-~~~l~~~l~~~~~d  227 (241)
                       ...+++.+...+.++++|++|+++ ...   +.+.+.++++.+++ .+.++++|+.....  .+ .+.+.++++  ++|
T Consensus        98 ~~~~l~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~v~~D~~~~~~--~~~~~~~~~~l~--~~d  173 (296)
T 2qhp_A           98 AWDNIPFTDELKRLALNTRAVCFGSLAQRNEVSRATINRFLDTMPDIDGQLKIFDINLRQD--FYTKEVLRESFK--RCN  173 (296)
T ss_dssp             GGGCCCCCHHHHHHHHTEEEEEECSGGGSSHHHHHHHHHHHHHSCCTTSCEEEEECCCCTT--CCCHHHHHHHHH--HCS
T ss_pred             hhhhCCcchhhHhhhcCCCEEEECChHhcChHHHHHHHHHHHHHHhcCCCEEEEECcCCcc--ccCHHHHHHHHH--HCC
Confidence             345544333335678999999983 211   34567778888776 68999999964321  11 234566777  899


Q ss_pred             EEecCHHHHHhhhC
Q 026265          228 LCFANEDEAAELVR  241 (241)
Q Consensus       228 ~l~~N~~Ea~~l~g  241 (241)
                      ++++|++|++.|+|
T Consensus       174 il~~N~~E~~~l~g  187 (296)
T 2qhp_A          174 ILKINDEELVTISR  187 (296)
T ss_dssp             EEEEEHHHHHHHHH
T ss_pred             EEECCHHHHHHHhc
Confidence            99999999998864

>2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1

Probab=99.91  E-value=3.9e-23  Score=174.28  Aligned_cols=181  Identities=20%  Similarity=0.241  Sum_probs=141.0

Q ss_pred             EEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCCce
Q 026265           18 ILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVPC   97 (241)
Q Consensus        18 v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~~~   97 (241)
                      |+++.+|+++|+++.++     ++  ..|.....                    ......+||+++|+|++++ +||.++
T Consensus         2 i~tv~~n~~~D~~~~~~-----~~--~~g~~~~~--------------------~~~~~~~GG~~~N~A~~la-~LG~~~   53 (306)
T 2abq_A            2 IYTVTLNPSIDYIVQVE-----NF--QQGVVNRS--------------------ERDRKQPGGKGINVSRVLK-RLGHET   53 (306)
T ss_dssp             EEEEESSCEEEEEEECT-----TC--CSSSEEEC--------------------SEEEEEEECHHHHHHHHHH-HTTCCC
T ss_pred             EEEEecCchheEEEEcC-----Cc--ccCCeEEe--------------------ceeEecCCchHHHHHHHHH-HcCCCc
Confidence            56666699999999994     44  34544321                    2678899999999999999 899999


Q ss_pred             eEEeeecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEEEcCCCCeeeeeCccccCCCCcccCCh--hh---hCCcc
Q 026265           98 GLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA--ED---VKGSK  172 (241)
Q Consensus        98 ~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~~--~~---i~~~~  172 (241)
                      .++|.+|+ .+|+++++.|++.||+++++.+.+ .|++++++ + +|+|+++..+++  .+++++++.  +.   ++++|
T Consensus        54 ~~~~~vG~-~~g~~i~~~L~~~gv~~~~v~~~~-~t~~~~~~-~-~g~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~  127 (306)
T 2abq_A           54 KALGFLGG-FTGAYVRNALEKEEIGLSFIEVEG-DTRINVKI-K-GKQETELNGTAP--LIKKEHVQALLEQLTELEKGD  127 (306)
T ss_dssp             EEEEEEEH-HHHHHHHHHHHHTTCEECCEEESS-CCEEEEEE-E-SSSCEEEBCCCC--CCCHHHHHHHHHHHTTCCTTC
T ss_pred             eEEEEecc-hhHHHHHHHHHHcCCceEEEEcCC-CCceEEEE-e-CCceEEEECCCC--CCCHHHHHHHHHHHHhccCCC
Confidence            99999998 899999999999999999988754 58888776 4 788877665554  466655432  11   57899


Q ss_pred             EEEEEecc---ccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          173 WLVLRFGM---FNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       173 ~v~~~~~~---~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      ++|++..+   .+.+.+.++++.+++.|+++++|+++.        .+.+++++ ++|++++|++|++.|+|
T Consensus       128 ~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~--------~~~~~l~~-~~dil~~N~~E~~~l~g  190 (306)
T 2abq_A          128 VLVLAGSVPQAMPQTIYRSMTQIAKERGAFVAVDTSGE--------ALHEVLAA-KPSFIKPNHHELSELVS  190 (306)
T ss_dssp             EEEEESCCCTTSCTTHHHHHHHHHHTTTCEEEEECCHH--------HHHHHGGG-CCSEECCBHHHHHHHHT
T ss_pred             EEEEecCCCCCCCHHHHHHHHHHHHhcCCEEEEECChH--------HHHHHHhc-CCcEEecCHHHHHHHhC
Confidence            99998332   234778889999999999999999743        23444542 78999999999998875

>2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1

Probab=99.90  E-value=1e-22  Score=174.97  Aligned_cols=165  Identities=17%  Similarity=0.285  Sum_probs=129.9

Q ss_pred             CceeecCChHHHHHHHHHhhcCCceeEEeeecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEEEcCCCCe-eeeeC
Q 026265           73 PIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNR-TMRPC  151 (241)
Q Consensus        73 ~~~~~~GG~~~N~a~~la~~LG~~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~~~~g~r-~~~~~  151 (241)
                      .....+||+++|+|++++ +||.++.++|.+|+|.+|+++++.|++.||++.++...+.+|+.+++.++. |+| +++.+
T Consensus        38 ~~~~~~GG~~~NvA~~la-~LG~~~~~i~~vG~D~~G~~i~~~L~~~gv~~~~v~~~~~~t~~~~v~~~~-~~r~~~v~~  115 (351)
T 2afb_A           38 SFDVTYGGAEANVAAFLA-QMGLDAYFVTKLPNNPLGDAAAGHLRKFGVKTDYIARGGNRIGIYFLEIGA-SQRPSKVVY  115 (351)
T ss_dssp             EEEEEEECHHHHHHHHHH-HTTSEEEEEEEECSSHHHHHHHHHHHHTTCBCTTEEECSSCCCEEEEECCB-TTBCCEEEE
T ss_pred             eeeEecCChHHHHHHHHH-HcCCCeEEEEEeCCCHHHHHHHHHHHHcCCcceeEEECCCcceEEEEEecC-CCCcceEEE
Confidence            678899999999999999 899999999999999999999999999999999988755589998887764 555 44443


Q ss_pred             c---cccCCCCcccCChh-hhCCccEEEEE-ecc-cc---HHHHHHHHHHHHHCCCeEEEeCCchHHH---hhchhhHHh
Q 026265          152 L---SNAVKIQADELIAE-DVKGSKWLVLR-FGM-FN---FEVIQAAIRIAKQEGLSVSMDLASFEMV---RNFRTPLLQ  219 (241)
Q Consensus       152 ~---g~~~~l~~~~~~~~-~i~~~~~v~~~-~~~-~~---~~~~~~~~~~a~~~g~~i~~D~~~~~~~---~~~~~~l~~  219 (241)
                      .   .+...++++++... .+++++++|++ +.. .+   .+.+.++++.+++.|++++||++.....   ...++.+.+
T Consensus       116 ~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~  195 (351)
T 2afb_A          116 DRAHSAISEAKREDFDWEKILDGARWFHFSGITPPLGKELPLILEDALKVANEKGVTVSCDLNYRARLWTKEEAQKVMIP  195 (351)
T ss_dssp             ECTTCTTTTCCGGGCCHHHHTTTEEEEEEETTSGGGSTTHHHHHHHHHHHHHHHTCEEEEECCCCTTTCCHHHHHHHHHH
T ss_pred             eCCCChhhhCChhhCCHHHhhcCCCEEEEeCcccccChhHHHHHHHHHHHHHHcCCEEEEeCCCchhcCChHHHHHHHHH
Confidence            3   23346677776643 46899999999 321 12   3778889999999999999999743110   122345667


Q ss_pred             hhcCCCccEEecCHHHHHhhhC
Q 026265          220 LLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       220 ~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      +++  ++|++++|++|++.|+|
T Consensus       196 ll~--~~dil~~N~~E~~~l~g  215 (351)
T 2afb_A          196 FME--YVDVLIANEEDIEKVLG  215 (351)
T ss_dssp             HGG--GCSEEEECHHHHHHHHC
T ss_pred             HHh--hCCEEEecHHHHHHHhC
Confidence            787  99999999999999875

>2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus}

Probab=99.90  E-value=6.2e-23  Score=172.94  Aligned_cols=181  Identities=17%  Similarity=0.180  Sum_probs=139.5

Q ss_pred             EEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCCce
Q 026265           18 ILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVPC   97 (241)
Q Consensus        18 v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~~~   97 (241)
                      |+++.+|+++|+++.++     ++  ..|....+                    ......+||+++|+|++++ +||.++
T Consensus         2 i~tvt~n~~~D~~~~~~-----~~--~~g~~~~~--------------------~~~~~~~GG~~~N~A~~la-~LG~~~   53 (306)
T 2jg5_A            2 IYTVTFNPSIDYVIFTN-----DF--KIDGLNRA--------------------TATYKFAGGKGINVSRVLK-TLDVES   53 (306)
T ss_dssp             EEEEESSCEEEEEEECS-----SC--CTTSEEEC--------------------SEEEEEEESHHHHHHHHHH-HTTCCC
T ss_pred             EEEEecCceEEEEEEcC-----Cc--ccCceEEe--------------------ceeEecCCchHHHHHHHHH-HcCCCe
Confidence            45555599999999994     42  34443321                    2678899999999999999 899999


Q ss_pred             eEEeeecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEEEcCCCCeeeeeCccccCCCCcccCCh--hh---hCCcc
Q 026265           98 GLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA--ED---VKGSK  172 (241)
Q Consensus        98 ~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~~--~~---i~~~~  172 (241)
                      .++|.+|+ ++|+++++.|++.||+++++.+.+ .|++++++  ++|+|+++..+++  .+++++++.  +.   ++++|
T Consensus        54 ~~~~~vG~-~~g~~i~~~l~~~gv~~~~v~~~~-~t~~~~~~--~~g~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~  127 (306)
T 2jg5_A           54 TALGFAGG-FPGKFIIDTLNNSAIQSNFIEVDE-DTRINVKL--KTGQETEINAPGP--HITSTQFEQLLQQIKNTTSED  127 (306)
T ss_dssp             EEEEEECH-HHHHHHHHHHHHTTCEECCEECSS-CCEEEEEE--ESSSEEEEECCCC--CCCHHHHHHHHHHHTTCCTTC
T ss_pred             eEEEEecC-cchHHHHHHHHHCCCceeEEEcCC-CCeEEEEE--cCCCEEEEECCCC--CCCHHHHHHHHHHHHhccCCC
Confidence            99999999 799999999999999999988754 58888776  4788877766664  366555432  11   57899


Q ss_pred             EEEEEecc---ccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          173 WLVLRFGM---FNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       173 ~v~~~~~~---~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      ++|+++.+   .+.+.+.++++.+++.|++++||+++.        .+.+++++ ++|++++|++|++.|+|
T Consensus       128 ~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~--------~~~~~l~~-~~dil~~N~~E~~~l~g  190 (306)
T 2jg5_A          128 IVIVAGSVPSSIPSDAYAQIAQITAQTGAKLVVDAEKE--------LAESVLPY-HPLFIKPNKDELEVMFN  190 (306)
T ss_dssp             EEEEESCCCTTSCTTHHHHHHHHHHHHCCEEEEECCHH--------HHHHHGGG-CCSEECCBHHHHHHHTT
T ss_pred             EEEEeCCCCCCCChHHHHHHHHHHHHCCCEEEEECChH--------HHHHHHhc-CCeEEecCHHHHHHHhC
Confidence            99998432   124678888999999999999999753        23444541 58999999999998875

>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum}

Probab=99.88  E-value=3.6e-22  Score=168.98  Aligned_cols=178  Identities=19%  Similarity=0.202  Sum_probs=135.5

Q ss_pred             CeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCC
Q 026265           16 ALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGV   95 (241)
Q Consensus        16 ~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~   95 (241)
                      .+|+++| .+++|++....                                     ......+||+++|+|++++ +||.
T Consensus         3 ~~ilviG-~~~iD~~~~~~-------------------------------------~~~~~~~GG~~~NvA~~la-~LG~   43 (313)
T 3kd6_A            3 LSLLVIG-SLAFDDIETPF-------------------------------------GRSDNTLGGSSTYIALSAS-YFTD   43 (313)
T ss_dssp             CCEEEES-CCEEEEEECSS-------------------------------------CEEEEEEECHHHHHHHHHT-TTCS
T ss_pred             ccEEEEe-EEEEeeecCCC-------------------------------------CcccccCCCHHHHHHHHHH-HhCC
Confidence            4699999 99999996431                                     1456899999999999999 8999


Q ss_pred             -ceeEEeeecCChhHHHHHHHHHhCCceeeceeecCC-CceeEEE--EEcCCCCeeeeeCccccCCCCcccCChhhhCCc
Q 026265           96 -PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVC--LVDASGNRTMRPCLSNAVKIQADELIAEDVKGS  171 (241)
Q Consensus        96 -~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~-~T~~~~~--~~~~~g~r~~~~~~g~~~~l~~~~~~~~~i~~~  171 (241)
                       ++.++|.+|+| +|+++++.|++.||+++++.+.++ +|....-  ..+.++++++....++...+.+. + .+.++++
T Consensus        44 ~~~~~ig~vG~D-~g~~~~~~L~~~gVd~~~v~~~~~~~T~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~  120 (313)
T 3kd6_A           44 EPIRMVGVVGSD-FGKEHFDLLHAKNIDTRGIQVIEDGKTFRWAGRYHYDMNTRDTLDTQLNVFAEFDPH-V-PQYYRDS  120 (313)
T ss_dssp             SCEEEEEEEETT-SCHHHHHHHHHTTEEEEEEEEETTCCCEEEEEEECTTSSCEEEEEEECGGGTTCCCC-C-CGGGTTC
T ss_pred             CceEEEEecCCC-cHHHHHHHHHHcCCCccceEEcCCCCeeeeeeeeeccccccceeecccchHhhcCcc-c-hHHHccC
Confidence             99999999999 999999999999999999987764 6633211  22334555665555555555543 2 3468899


Q ss_pred             cEEEEEeccccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          172 KWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       172 ~~v~~~~~~~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      +++|++.  .+++...++++.+ +.+.++++|+.+... ....+.+.++++  ++|++++|++|++.|+|
T Consensus       121 ~~v~~~~--~~~~~~~~~~~~~-~~~~~v~~Dp~~~~~-~~~~~~~~~~l~--~~dil~~N~~E~~~l~g  184 (313)
T 3kd6_A          121 KFVCLGN--IDPELQLKVLDQI-DDPKLVVCDTMNFWI-EGKPEELKKVLA--RVDVFIVNDSEARLLSG  184 (313)
T ss_dssp             SEEEECS--SCHHHHHHHHTTC-SSCSEEEEECCHHHH-HHCHHHHHHHHT--TCSEEEEEHHHHHHHHS
T ss_pred             CEEEEcC--CCHHHHHHHHHHH-hhCCEEEEcChhhhh-hhhHHHHHHHHh--cCCEEEeCHHHHHHHhC
Confidence            9999974  3566666777777 578899999954321 234556777888  99999999999999875

>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1

Probab=99.85  E-value=2.9e-21  Score=162.32  Aligned_cols=177  Identities=17%  Similarity=0.045  Sum_probs=132.7

Q ss_pred             CCeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcC
Q 026265           15 AALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFG   94 (241)
Q Consensus        15 ~~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG   94 (241)
                      ..++.+.| .+..|.+.+..                                      .....+||+++|+|++++ +||
T Consensus        11 ~~~~~~~~-~~~~~~~~~~~--------------------------------------~~~~~~GG~~~NvA~~la-~LG   50 (298)
T 1vk4_A           11 HHMITFIG-HVSKDVNVVDG--------------------------------------KREIAYGGGVVMGAITSS-LLG   50 (298)
T ss_dssp             CSEEEEEC-CCEEEEEEETT--------------------------------------EEEEEEECHHHHHHHHHH-HTT
T ss_pred             ceeEEEec-cccCceEeecC--------------------------------------eEEEecCCHHHHHHHHHH-HcC
Confidence            46789998 99999888772                                      467899999999999999 899


Q ss_pred             CceeEEeeecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEEEcCCCCeeeeeCccccCCCCcccCChhhhCCccEE
Q 026265           95 VPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWL  174 (241)
Q Consensus        95 ~~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~~~~i~~~~~v  174 (241)
                      .++.++|.+|+|.  +.+++.|++.||++.++.. +.+|+.+.++ +++|+|+++.+.++...++++++..   ..++++
T Consensus        51 ~~~~~i~~vG~D~--~~~~~~L~~~gVd~~~v~~-~~~t~~~~i~-~~~g~~~~~~~~~~~~~l~~~~~~~---~~~~~v  123 (298)
T 1vk4_A           51 VKTKVITKCTRED--VSKFSFLRDNGVEVVFLKS-PRTTSIENRY-GSDPDTRESFLISAADPFTESDLAF---IEGEAV  123 (298)
T ss_dssp             CEEEEEEEECTTT--GGGGTTTGGGTCEEEEEEC-SSCEEEEEEC------CCEEEEEECCCCCCGGGGGG---CCSSEE
T ss_pred             CceEEEEEEcCCH--HHHHHHHHHcCCceEEEec-CCCcEEEEEE-cCCCCeeEEEeccccccCCHHHcCc---CCCCEE
Confidence            9999999999997  8899999999999998765 3467777665 5578888877777777777766543   689999


Q ss_pred             EEEeccccHHHHHHHHHHHHHCCCeEEEeCCchHHH-------hhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          175 VLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMV-------RNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~-------~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      |++... +.+...++++.+++.|.++++|+++....       ....+.+.++++  ++|++++|++|++.|+|
T Consensus       124 ~~~~~~-~~~~~~~~~~~~~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~~~~l~--~~dil~~N~~E~~~l~g  194 (298)
T 1vk4_A          124 HINPLW-YGEFPEDLIPVLRRKVMFLSADAQGFVRVPENEKLVYRDWEMKEKYLK--YLDLFKVDSREAETLTG  194 (298)
T ss_dssp             EECCSS-TTSSCGGGHHHHHHHCSEEEEETHHHHEEEETTEEEECCCTTHHHHGG--GCSEEEEEHHHHHHHHS
T ss_pred             EECCcc-cccccHHHHHHHHHcCCEEEEecCccccccccccccccchHHHHhhcc--cCCEEecCHHHHHHHhC
Confidence            998321 22233466777888899999999742100       011124556777  99999999999999875

>2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A*

Probab=98.89  E-value=6.1e-10  Score=93.67  Aligned_cols=124  Identities=15%  Similarity=0.166  Sum_probs=82.8

Q ss_pred             ceeEEeeecCChhHHHHHHHHHhCCceeeceeec--CCCceeEEEEEcCCCCeeeeeCccccCCCCcccCCh--hh----
Q 026265           96 PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMK--RGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA--ED----  167 (241)
Q Consensus        96 ~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~--~~~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~~--~~----  167 (241)
                      .+.++|.+|+|. |+++   |++.||++.++...  .++|++++             ..|  ..+++++++.  +.    
T Consensus        12 ~~~~~g~vG~D~-g~~i---L~~~GV~~~~v~~~~~~~~t~~~~-------------~~g--~~l~~~~i~~~~~~~~~~   72 (312)
T 2yxt_A           12 SHVIRGYVGNRA-ATFP---LQVLGFEIDAVNSVQFSNHTGYAH-------------WKG--QVLNSDELQELYEGLRLN   72 (312)
T ss_dssp             EEESSSCSTHHH-HHHH---HHHTTCEEEEEEEEEESSCTTSSC-------------CCE--EECCHHHHHHHHHHHHHT
T ss_pred             cccCCCccchHh-hHHH---HHHcCCeEEEEEEEEecCCCCcCC-------------ccC--ccCCHHHHHHHHHHHHhc
Confidence            578899999998 9999   99999999887653  12222211             222  2455555431  11    


Q ss_pred             -hCCccEEEEEecccc---HHHHHHHHHHHHHCCCe--EEEeCCchHH---------HhhchhhHHh-hhcCCCccEEec
Q 026265          168 -VKGSKWLVLRFGMFN---FEVIQAAIRIAKQEGLS--VSMDLASFEM---------VRNFRTPLLQ-LLESGDVDLCFA  231 (241)
Q Consensus       168 -i~~~~~v~~~~~~~~---~~~~~~~~~~a~~~g~~--i~~D~~~~~~---------~~~~~~~l~~-~l~~~~~d~l~~  231 (241)
                       +++++++++.+.. +   .+.+.++++.+++.|.+  +++||.....         .+.+.+.+.+ +++  ++|+++|
T Consensus        73 ~~~~~~~v~~G~~~-~~~~~~~~~~~~~~a~~~g~~~~vv~Dp~~~~~~~~sg~~~~~~~~~~~l~~~ll~--~~dil~p  149 (312)
T 2yxt_A           73 NMNKYDYVLTGYTR-DKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWDGEGSMYVPEDLLPVYKEKVVP--LADIITP  149 (312)
T ss_dssp             TCCCCSEEEECCCC-CHHHHHHHHHHHHHHHHHCTTCEEEECCCCEEC--CCCEESSCTTHHHHHHHTTGG--GCSEECC
T ss_pred             CCccCCEEEECCCC-CHHHHHHHHHHHHHHHhhCCCCeEEECCCcCCCCCCCCCeeCCHHHHHHHHHHhhh--hCCEEcC
Confidence             6789998876432 4   45566888888888864  8899864311         0122334544 677  9999999


Q ss_pred             CHHHHHhhhC
Q 026265          232 NEDEAAELVR  241 (241)
Q Consensus       232 N~~Ea~~l~g  241 (241)
                      |++|++.|+|
T Consensus       150 N~~Ea~~L~g  159 (312)
T 2yxt_A          150 NQFEAELLSG  159 (312)
T ss_dssp             CHHHHHHHHS
T ss_pred             CHHHHHHHhC
Confidence            9999999875

>2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal 5'-phosphate, vitamin B6, phosphorylation, transferase; 2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A*

Probab=98.48  E-value=1.2e-07  Score=78.39  Aligned_cols=131  Identities=13%  Similarity=0.108  Sum_probs=83.7

Q ss_pred             hcCCceeE-EeeecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEEEcCCCCeeeeeCccccCCCCcccCCh-----
Q 026265           92 GFGVPCGL-IGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA-----  165 (241)
Q Consensus        92 ~LG~~~~~-vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~~-----  165 (241)
                      -|++.... +|.+|.|.    .++.|++.||++.++..       + ++.+..|.|.+   .+  ..++++++..     
T Consensus        18 vL~i~~~~~~g~~G~d~----~~~~l~~~Gv~~~~v~t-------~-i~~~~~g~~~~---~g--~~~~~~~~~~~~~~l   80 (283)
T 2ddm_A           18 IVAVQSQVVYGSVGNSI----AVPAIKQNGLNVFAVPT-------V-LLSNTPHYDTF---YG--GAIPDEWFSGYLRAL   80 (283)
T ss_dssp             EEEEEEEESSSSSTHHH----HHHHHHHTTCCEEEEEE-------E-EESSCTTSSCC---CE--EECCHHHHHHHHHHH
T ss_pred             EEEEecccCCCcchHHH----HHHHHHHcCCeeeEEeE-------E-EeccCCCcCce---ee--eeCCHHHHHHHHHHH
Confidence            57777555 88899873    56789999999987753       1 22344565552   22  2344444321     


Q ss_pred             -h--hhCCccEEEEEeccc--cHHHHHHHHHHHHH--CCCeEEEeCCchHH------HhhchhhH-HhhhcCCCccEEec
Q 026265          166 -E--DVKGSKWLVLRFGMF--NFEVIQAAIRIAKQ--EGLSVSMDLASFEM------VRNFRTPL-LQLLESGDVDLCFA  231 (241)
Q Consensus       166 -~--~i~~~~~v~~~~~~~--~~~~~~~~~~~a~~--~g~~i~~D~~~~~~------~~~~~~~l-~~~l~~~~~d~l~~  231 (241)
                       +  .+++++++++++...  ..+.+.++++.+++  .|++++|||.....      .+...+.+ .++++  ++|+++|
T Consensus        81 ~~~~~~~~~~~v~~G~l~~~~~~~~~~~~l~~a~~~~~g~~vv~Dp~~~~~~~~~~~~~~~~~~~~~~ll~--~~dil~p  158 (283)
T 2ddm_A           81 QERDALRQLRAVTTGYMGTASQIKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLP--LAQGITP  158 (283)
T ss_dssp             HHTTCCTTCCEEEECCCSCHHHHHHHHHHHHHHHTTCTTCEEEECCCCEETTTEECSCTTHHHHHHHTTGG--GCSEECC
T ss_pred             HhcCCcccCCEEEECCcCCHHHHHHHHHHHHHHHhcCCCCeEEECCcccCCCCCcccCHHHHHHHHHhhhh--hceEecC
Confidence             1  356789999984211  24667788888887  79999999864310      00011222 24666  8999999


Q ss_pred             CHHHHHhhhC
Q 026265          232 NEDEAAELVR  241 (241)
Q Consensus       232 N~~Ea~~l~g  241 (241)
                      |+.|++.|+|
T Consensus       159 N~~E~~~L~g  168 (283)
T 2ddm_A          159 NIFELEILTG  168 (283)
T ss_dssp             BHHHHHHHHT
T ss_pred             CHHHHHHHhC
Confidence            9999999875

>1jxh_A Phosphomethylpyrimidine kinase; THID, ribokinase family, phophorylation, transferase; 2.30A {Salmonella typhimurium} SCOP: c.72.1.2 PDB: 1jxi_A*

Probab=97.89  E-value=7e-06  Score=67.99  Aligned_cols=68  Identities=19%  Similarity=0.151  Sum_probs=48.8

Q ss_pred             ccEEEEEeccccHHHHHHHHHHHHHCCCe-EEEeCCchHHH------hhchhhHHh-hhcCCCccEEecCHHHHHhhhC
Q 026265          171 SKWLVLRFGMFNFEVIQAAIRIAKQEGLS-VSMDLASFEMV------RNFRTPLLQ-LLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       171 ~~~v~~~~~~~~~~~~~~~~~~a~~~g~~-i~~D~~~~~~~------~~~~~~l~~-~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      ++++++.+. .+.+.+..+++.+++.+.+ ++|||......      +...+.+.+ +++  ++|+++||+.|++.|+|
T Consensus        95 ~~~v~~G~l-~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~g~~l~~~~~~~~l~~~ll~--~~dil~pN~~Ea~~L~g  170 (288)
T 1jxh_A           95 IDTTKIGML-AETDIVEAVAERLQRHHVRNVVLDTVMLAKSGDPLLSPSAIETLRVRLLP--QVSLITPNLPEAAALLD  170 (288)
T ss_dssp             CSEEEECCC-CSHHHHHHHHHHHHHTTCCSEEEECCCC------CCCHHHHHHHHHHTGG--GCSEEECBHHHHHHHHT
T ss_pred             CCEEEECCC-CCHHHHHHHHHHHHHCCCCeEEEcCcccCCCCCccCCHHHHHHHHHHHHh--hCcEEcCCHHHHHHHcC
Confidence            788887753 3678888899999999996 99998643100      001123443 666  89999999999999875

>3drw_A ADP-specific phosphofructokinase; AMP, GLYC kinase, magnesium, metal-binding, transferase, structural G PSI-2, protein structure initiative; HET: AMP; 1.90A {Pyrococcus horikoshii} PDB: 1u2x_A

Probab=97.82  E-value=0.00021  Score=62.74  Aligned_cols=158  Identities=15%  Similarity=0.171  Sum_probs=92.3

Q ss_pred             ceeecCChHHHHHHHHHhhcCC-ceeEEeeecCChhHHHHHHHHHhCCc-------------------------eeecee
Q 026265           74 IKTIAGGSVTNTIRGLSVGFGV-PCGLIGAYGDDQQGQLFVSNMQFSGV-------------------------DVSRLR  127 (241)
Q Consensus        74 ~~~~~GG~~~N~a~~la~~LG~-~~~~vg~vG~D~~g~~i~~~l~~~gv-------------------------d~~~~~  127 (241)
                      ...+.||.+.-.|..++ ++|. ++.+.++.+..    ...+.| ..+|                         +..++.
T Consensus       112 ~~~~~GGnA~imAn~La-~lg~~~Vi~~~p~~sk----~~~~ll-~~~i~~p~~e~g~l~l~~~~ea~~~~~~~~iH~I~  185 (474)
T 3drw_A          112 EEERLGGQAGIIANTLA-GLKIRKVIAYTPFLPK----RLAELF-KKGVLYPVVENGELQFKPIQEAYREGDPLKINRIF  185 (474)
T ss_dssp             SEEEEESHHHHHHHHHH-HTTCSEEEECCSCCCH----HHHTTS-CTTEEEEEESSSSEEEEEGGGCCCTTCCCCEEEEE
T ss_pred             ceEecCChHHHHHHHHH-HcCCCcEEEecCcCCH----HHHHhc-CCcceeecccCCceeecCchhhhccCCCCCcEEEE
Confidence            46789999999999999 8999 58778877653    344444 2223                         222222


Q ss_pred             ecCCCceeEE---EEEcCCCCeeeeeCccccC-CCC-cccCC---hhhhCCccEEEEE-eccccH------------HHH
Q 026265          128 MKRGPTGQCV---CLVDASGNRTMRPCLSNAV-KIQ-ADELI---AEDVKGSKWLVLR-FGMFNF------------EVI  186 (241)
Q Consensus       128 ~~~~~T~~~~---~~~~~~g~r~~~~~~g~~~-~l~-~~~~~---~~~i~~~~~v~~~-~~~~~~------------~~~  186 (241)
                      .-+....+..   -++.+.-+|-++.+...+. .+. .+++.   .+..+.+|.++++ +..+..            +..
T Consensus       186 Ey~~G~~~~~~~~~~~aPraNRfI~s~D~~N~~~l~~~e~f~~~l~e~~~~~d~~vLSGlq~m~~~y~dg~~~~~~l~~~  265 (474)
T 3drw_A          186 EFRKGLKFKLGDETIEIPNSGRFIVSARFESISRIETREDIKPFLGEIGKEVDGAIFSGYQGLRTKYSDGKDANYYLRRA  265 (474)
T ss_dssp             EECTTCEEESSSCEEECCSCEEEEEEECCSGGGCCSCCTTTGGGHHHHHHHCSEEEECCGGGCCSBCTTSCBHHHHHHHH
T ss_pred             EcCCCCeeecCCceEEccCCCeEEEEcCCCCHHhccccHHHHHHHHHhhcCCCEEEEeccccccccccccccHHHHHHHH
Confidence            1111122220   1222334455554443333 343 33443   2233469999999 433211            223


Q ss_pred             HHHHHHHHHCCCeEEEeCCchHHHhhchhhH-HhhhcCCCccEEecCHHHHHhhh
Q 026265          187 QAAIRIAKQEGLSVSMDLASFEMVRNFRTPL-LQLLESGDVDLCFANEDEAAELV  240 (241)
Q Consensus       187 ~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l-~~~l~~~~~d~l~~N~~Ea~~l~  240 (241)
                      .+.++..+..++++-|...+..- ..++..+ ..+++  ++|.+-+|++|...+.
T Consensus       266 ~e~i~~l~~~~~~iH~E~As~~~-~~l~~~i~~~i~p--~vDSlGmNEqELa~l~  317 (474)
T 3drw_A          266 KEDIIEFKEKDVKIHVEFASVQD-RKLRKKIITNILP--FVDSVGIDEAEIAQIL  317 (474)
T ss_dssp             HHHHHHHHHTTCEEEEECCCCSC-HHHHHHHHHHTGG--GSSEEEEEHHHHHHHH
T ss_pred             HHHHHHhcCCCCeEEEEeCcccc-HHHHHHHHHHhcc--cccccccCHHHHHHHH
Confidence            35555556789999999865421 1344443 36777  9999999999988764

>1ua4_A Glucokinase, ADP-dependent glucokinase; transferase; HET: GLC BGC AMP; 1.90A {Pyrococcus furiosus} SCOP: c.72.1.3

Probab=97.36  E-value=0.0015  Score=57.25  Aligned_cols=156  Identities=15%  Similarity=0.099  Sum_probs=90.1

Q ss_pred             eecCChHHHHHHHHHhhcCCceeE--EeeecCChhHHHHHHHHHhCCceeecee------------ecCCCceeEEEEEc
Q 026265           76 TIAGGSVTNTIRGLSVGFGVPCGL--IGAYGDDQQGQLFVSNMQFSGVDVSRLR------------MKRGPTGQCVCLVD  141 (241)
Q Consensus        76 ~~~GG~~~N~a~~la~~LG~~~~~--vg~vG~D~~g~~i~~~l~~~gvd~~~~~------------~~~~~T~~~~~~~~  141 (241)
                      .+.||.+...|..++ .+|.++.+  ++.+|.     .+.+.|...+|..-.+.            ....+....+++-=
T Consensus       108 ~~~GGnA~imAn~la-~lg~~~vl~~~~~l~~-----~~~~lf~~~~i~~p~~~~~~~~l~~~~e~~~~~~~~iH~I~Ef  181 (455)
T 1ua4_A          108 LRMGGQAGIMANLLG-GVYGVPVIVHVPQLSR-----LQANLFLDGPIYVPTLENGEVKLIHPKEFSGDEENCIHYIYEF  181 (455)
T ss_dssp             EEEESHHHHHHHHHT-TTTCCCEEECCSCCCH-----HHHTTSCSSSEEEEEEETTEEEEECGGGCSCCCCCCEEEEEEE
T ss_pred             cccCCcHHHHHHHHH-HcCCCEEEEeCCCCCH-----HHHHhcCCCCeEeecccCCccccccchhhccCCCCCceEEEEc
Confidence            399999999999999 89999877  777664     35555553445431110            00123444444332


Q ss_pred             CCCC-----------eeeeeCccccCCCC-cccCCh---hhhCCccEEEEE-eccccH----HH---HHHHHHHHHHCCC
Q 026265          142 ASGN-----------RTMRPCLSNAVKIQ-ADELIA---EDVKGSKWLVLR-FGMFNF----EV---IQAAIRIAKQEGL  198 (241)
Q Consensus       142 ~~g~-----------r~~~~~~g~~~~l~-~~~~~~---~~i~~~~~v~~~-~~~~~~----~~---~~~~~~~a~~~g~  198 (241)
                      +.|+           |-++.+...+..+. .+++..   +...++|.+.++ +..++.    +.   .++.++..+..++
T Consensus       182 ~~G~~~~~~~aPraNRfI~s~D~~n~~l~~~e~f~~~l~e~~~~~dl~vlSG~q~l~~~~~~~~~~~~l~~i~~L~~~~~  261 (455)
T 1ua4_A          182 PRGFRVFEFEAPRENRFIGSADDYNTTLFIREEFRESFSEVIKNVQLAILSGLQALTKENYKEPFEIVKSNLEVLNEREI  261 (455)
T ss_dssp             CTTCEETTEECSSCEEEEEECCSSGGGTCCCGGGSTTHHHHGGGCSEEEECCGGGCCTTTCHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCCeecceeccccceeEEecCCCcccCcccHHHHHHHHhhccCCcEEEEechhcccccchHHHHHHHHHHHHHhcCCCc
Confidence            3444           33333322222332 223321   233559999999 433221    11   2221223366789


Q ss_pred             eEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhh
Q 026265          199 SVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELV  240 (241)
Q Consensus       199 ~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~  240 (241)
                      ++.|++.+... ..++..+..+++  ++|.+-+|++|+..+.
T Consensus       262 ~iH~ElAs~~~-~~~~~~i~~ilp--~vDSlGmNE~EL~~l~  300 (455)
T 1ua4_A          262 PVHLEFAFTPD-EKVREEILNVLG--MFYSVGLNEVELASIM  300 (455)
T ss_dssp             CEEEECCCCCC-HHHHHHHHHHGG--GCSEEEECHHHHHHHH
T ss_pred             eEEEEeCCccC-HHHHHHHHhhhc--cCcccccCHHHHHHHH
Confidence            99999875431 134445457888  9999999999998764

>1gc5_A ADP-dependent glucokinase; ALFA/beta sandwichs, induced-fitting, transferase; HET: ADP; 2.30A {Thermococcus litoralis} SCOP: c.72.1.3

Probab=97.32  E-value=0.0013  Score=57.65  Aligned_cols=154  Identities=14%  Similarity=0.127  Sum_probs=87.3

Q ss_pred             ecCChHHHHHHHHHhhcCCceeE--EeeecCChhHHHHHHHHHhCCceeecee----e--------cCCCceeEEEEEcC
Q 026265           77 IAGGSVTNTIRGLSVGFGVPCGL--IGAYGDDQQGQLFVSNMQFSGVDVSRLR----M--------KRGPTGQCVCLVDA  142 (241)
Q Consensus        77 ~~GG~~~N~a~~la~~LG~~~~~--vg~vG~D~~g~~i~~~l~~~gvd~~~~~----~--------~~~~T~~~~~~~~~  142 (241)
                      +.||.+.-.|..++ .+|.++.+  ++.+|     +...+.|...+|.+..+.    .        ...+.-.-+|+-=+
T Consensus       117 ~mGGnAgimAn~la-~lg~~~vl~~~~~~s-----~~~~~l~~~~~i~~p~~~~g~l~~~~~~ea~~~~~~~iH~I~Ey~  190 (467)
T 1gc5_A          117 RIGGQAGIMANLLG-GVYRIPTIVHVPQNP-----KLQAELFVDGPIYVPVFEGNKLKLVHPKDAIAEEEELIHYIYEFP  190 (467)
T ss_dssp             EEESHHHHHHHHHH-HTSCCCEEECCSCCC-----HHHHTTSCSSSEEEEEECSSCEEEECGGGSCCSCCCCEEEEEEEC
T ss_pred             ccCccHHHHHHHHH-hcCCCEEEEcCCCCC-----HHHHHhcCCCCeeeeeccCCceecccchhhccCCCCcceEEEEcC
Confidence            99999999999999 89998876  55555     445566653444322000    0        00122222222212


Q ss_pred             CC-----------CeeeeeCccccCCCCc-ccCC---hhhhCCccEEEEE-eccc-c-------H----HHHHHHHHHHH
Q 026265          143 SG-----------NRTMRPCLSNAVKIQA-DELI---AEDVKGSKWLVLR-FGMF-N-------F----EVIQAAIRIAK  194 (241)
Q Consensus       143 ~g-----------~r~~~~~~g~~~~l~~-~~~~---~~~i~~~~~v~~~-~~~~-~-------~----~~~~~~~~~a~  194 (241)
                      .|           +|-++.+...+..+.. +++.   .+...++|.+.++ +..+ .       .    +.+.+.++...
T Consensus       191 ~G~~~~~~~aPraNRfI~s~D~~N~~l~~~e~f~~~l~e~~~~~dl~vlSG~q~l~~~y~~g~~~~~~l~~~~~~l~~l~  270 (467)
T 1gc5_A          191 RGFQVFDVQAPRENRFIANADDYNARVYMRREFREGFEEITRNVELAIISGLQVLKEYYPDGTTYKDVLDRVESHLNILN  270 (467)
T ss_dssp             SSCEETTEECSSCEEEEEECCSSTTTTCCCHHHHHSHHHHHTTCSEEEECCGGGCCSBCTTSCBHHHHHHHHHHHHHHHH
T ss_pred             CCCeecceeccCCceEEEecCCCCccccccHHHHHHHHhhccCCCEEEEechhcccCccCCchhHHHHHHHHHHHHHhhc
Confidence            33           3444444333333322 2221   1334679999999 4331 1       1    22233333325


Q ss_pred             HCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhh
Q 026265          195 QEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAEL  239 (241)
Q Consensus       195 ~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l  239 (241)
                      ..++++-|...+..- ..++..+..+++  ++|-+=+|++|...+
T Consensus       271 ~~~~~iH~E~As~~~-~~l~~~i~~ilp--~vDSlGmNEqELa~l  312 (467)
T 1gc5_A          271 RYNVKSHFEFAYTAN-RRVREALVELLP--KFTSVGLNEVELASI  312 (467)
T ss_dssp             HTTCEEEEECCCCCC-HHHHHHHHHHGG--GCSEEEECHHHHHHH
T ss_pred             CCCCeEEEEECCccc-HHHHHHHHhhcc--ccccCccCHHHHHHH
Confidence            678999999865421 134555557887  999999999999754

>1l2l_A ADP-dependent glucokinase; ADP glucokinase APO, transferase; 2.00A {Pyrococcus horikoshii} SCOP: c.72.1.3

Probab=97.27  E-value=0.00089  Score=58.62  Aligned_cols=153  Identities=16%  Similarity=0.092  Sum_probs=87.1

Q ss_pred             ecCChHHHHHHHHHhhcCCceeE--EeeecCChhHHHHHHHHHhCCceee------------------------ceeecC
Q 026265           77 IAGGSVTNTIRGLSVGFGVPCGL--IGAYGDDQQGQLFVSNMQFSGVDVS------------------------RLRMKR  130 (241)
Q Consensus        77 ~~GG~~~N~a~~la~~LG~~~~~--vg~vG~D~~g~~i~~~l~~~gvd~~------------------------~~~~~~  130 (241)
                      +.||.+.-.|..++ .+|.++.+  ++.+|     +...+.|...+|..-                        ++..-+
T Consensus       112 ~mGGnA~imAn~la-~lg~~~vl~~~~~~s-----~~~~~l~~~~~i~~p~~~~g~l~l~~~~e~~~~~~~~iH~I~Ey~  185 (457)
T 1l2l_A          112 RMGGQVGIMANLLG-GVYGIPVIAHVPQLS-----ELQASLFLDGPIYVPTFERGELRLIHPREFRKGEEDCIHYIYEFP  185 (457)
T ss_dssp             EEESHHHHHHHHHT-TTSCCCEEECCSSCC-----HHHHHTSCSSSEEEEC------CEECGGGC----CCCEEECCEEC
T ss_pred             ccCchHHHHHHHHH-HcCCCEEEEcCCCCC-----HHHHHhcCCCCeEeeeccCCceeccCchhhccCCCCcceEEEEcC
Confidence            99999999999999 89998876  55555     345555543333321                        111111


Q ss_pred             CCceeEEEEEcCCCCeeeeeCccccCCCC-cccCC---hhhhCCccEEEEE-ecccc----H---HHHHHHHHHHHHCCC
Q 026265          131 GPTGQCVCLVDASGNRTMRPCLSNAVKIQ-ADELI---AEDVKGSKWLVLR-FGMFN----F---EVIQAAIRIAKQEGL  198 (241)
Q Consensus       131 ~~T~~~~~~~~~~g~r~~~~~~g~~~~l~-~~~~~---~~~i~~~~~v~~~-~~~~~----~---~~~~~~~~~a~~~g~  198 (241)
                      ....+. -++.+.-+|-++.+...+..+. .+++.   .+...++|.+.++ +..+.    .   +...+.++..+..++
T Consensus       186 ~G~~~~-~~~aPraNRfI~s~D~~N~~l~~~e~f~~~l~e~~~~~d~~vlSG~q~l~~~~~~~~~~~~~~~i~~L~~~~~  264 (457)
T 1l2l_A          186 RNFKVL-DFEAPRENRFIGAADDYNPILYVREEWIERFEEIAKRSELAIISGLHPLTQENHGKPIKLVREHLKILNDLGI  264 (457)
T ss_dssp             TTCEET-TEECSSCEEEEEEECSSGGGTCCCHHHHHSHHHHHTTCSEEEEECCTTCCTTTCHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCeec-ceecCCCCeEEEEcCCCCCCCcccHHHHHHHHhhccCCCEEEEeccccccccchhhhHHHHHHHHHHhcCCCC
Confidence            111111 1222333444444433333332 22222   1334679999999 43322    1   112223333367899


Q ss_pred             eEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhh
Q 026265          199 SVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAEL  239 (241)
Q Consensus       199 ~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l  239 (241)
                      ++-|...+..- ..++..+..+++  ++|-+=+|++|...+
T Consensus       265 ~iH~E~As~~~-~~l~~~i~~ilp--~vDSlGmNEqELa~l  302 (457)
T 1l2l_A          265 RAHLEFAFTPD-EVVRLEIVKLLK--HFYSVGLNEVELASV  302 (457)
T ss_dssp             EEEEECCCCSS-HHHHHHHHHHGG--GCSEEEECHHHHHHH
T ss_pred             eEEEEECCccc-HHHHHHHHhhcc--ccccCccCHHHHHHH
Confidence            99999865421 134555557887  999999999999765

>1ekq_A Hydroxyethylthiazole kinase; alpha-beta, transferase; 1.50A {Bacillus subtilis} SCOP: c.72.1.2 PDB: 1ekk_A 1c3q_A 1esj_A 1esq_A*

Probab=97.21  E-value=0.00065  Score=55.67  Aligned_cols=89  Identities=22%  Similarity=0.213  Sum_probs=56.0

Q ss_pred             CccccCCCCcccCC--hhhhCCccEEEEEecccc---HHHHHHHHHHHHHCCCeEEEeCCchHHHhhchh-hHHhhhcCC
Q 026265          151 CLSNAVKIQADELI--AEDVKGSKWLVLRFGMFN---FEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRT-PLLQLLESG  224 (241)
Q Consensus       151 ~~g~~~~l~~~~~~--~~~i~~~~~v~~~~~~~~---~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~-~l~~~l~~~  224 (241)
                      ..|+.+.++ ++..  .+.++.++++++...+.+   .+.+.++++.+++.|+++++|+...... .++. ...++++..
T Consensus        38 ~~Ga~p~m~-~~~~e~~~~~~~a~~lvi~~G~~~~~~~~~~~~~~~~a~~~~~pvVlDp~g~~~~-~~~~~~~~~ll~~~  115 (272)
T 1ekq_A           38 ALGASPVMA-YAKEEVADMAKIAGALVLNIGTLSKESVEAMIIAGKSANEHGVPVILDPVGAGAT-PFRTESARDIIREV  115 (272)
T ss_dssp             HHTCEEECC-CCTTTHHHHHHHSSEEEEECTTCCHHHHHHHHHHHHHHHHTTCCEEEECTTBTTB-HHHHHHHHHHHHHS
T ss_pred             HcCCchhhc-CCHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHHhcCCeEEEeCCCcCcc-cchHHHHHHHHccC
Confidence            345555444 2222  345677999999833323   3567778888889999999999643100 1111 122333212


Q ss_pred             CccEEecCHHHHHhhhC
Q 026265          225 DVDLCFANEDEAAELVR  241 (241)
Q Consensus       225 ~~d~l~~N~~Ea~~l~g  241 (241)
                      ++|+++||..|++.|+|
T Consensus       116 ~~~vitPN~~E~~~L~g  132 (272)
T 1ekq_A          116 RLAAIRGNAAEIAHTVG  132 (272)
T ss_dssp             CCSEEEECHHHHHHHCC
T ss_pred             CCeEECCCHHHHHHHhC
Confidence            78999999999999976

>3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei}

Probab=97.16  E-value=0.00039  Score=57.85  Aligned_cols=70  Identities=14%  Similarity=0.140  Sum_probs=47.5

Q ss_pred             CCccEEEEEecccc---HHHHHHHHHHHHHCC------CeEEEeCCc-----hHHHhhchhhHHhhhcCCCccEEecCHH
Q 026265          169 KGSKWLVLRFGMFN---FEVIQAAIRIAKQEG------LSVSMDLAS-----FEMVRNFRTPLLQLLESGDVDLCFANED  234 (241)
Q Consensus       169 ~~~~~v~~~~~~~~---~~~~~~~~~~a~~~g------~~i~~D~~~-----~~~~~~~~~~l~~~l~~~~~d~l~~N~~  234 (241)
                      .++|+|.+.+.. +   .+.+.++++.+++.+      .++++||.-     .+..+...+.+.++++  ++|+++||..
T Consensus        75 ~~~daV~tG~l~-s~~~i~~v~~~l~~~k~~~~~~~~~~~vv~DPVm~d~G~~~~~~~~~~~~~~Ll~--~adiitPN~~  151 (300)
T 3zs7_A           75 SNYRYILTGYIN-NVDIIGRIRDTLKEVRELREKEDKKLTFICDPVMGDDGIMYCKKEVLDAYRELVP--LADIVTPNYF  151 (300)
T ss_dssp             GGCSEEEECCCC-CHHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCC---------CTHHHHHHHHGG--GCSEECCCHH
T ss_pred             ccCCEEEECCCC-CHHHHHHHHHHHHHHHhhCcCcCCCceEEEccccccCCCeecCHHHHHHHHHHhh--hCCEecCCHH
Confidence            468888887532 3   355666677766554      789999931     1111233445666777  9999999999


Q ss_pred             HHHhhhC
Q 026265          235 EAAELVR  241 (241)
Q Consensus       235 Ea~~l~g  241 (241)
                      |++.|+|
T Consensus       152 Ea~~L~g  158 (300)
T 3zs7_A          152 EASLLSG  158 (300)
T ss_dssp             HHHHHHS
T ss_pred             HHHHHhC
Confidence            9999986

>2i5b_A Phosphomethylpyrimidine kinase; ADP complex, PDXK, THID, ribokinase superfamily, transferase; HET: ADP; 2.80A {Bacillus subtilis}

Probab=97.10  E-value=0.00084  Score=54.67  Aligned_cols=69  Identities=20%  Similarity=0.160  Sum_probs=49.7

Q ss_pred             CccEEEEEeccccHHHHHHHHHHHHHCCC-eEEEeCCchHHH------hhchhhHH-hhhcCCCccEEecCHHHHHhhhC
Q 026265          170 GSKWLVLRFGMFNFEVIQAAIRIAKQEGL-SVSMDLASFEMV------RNFRTPLL-QLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       170 ~~~~v~~~~~~~~~~~~~~~~~~a~~~g~-~i~~D~~~~~~~------~~~~~~l~-~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      +.|.+++.+ +.+.+.+..+++.+++.+. +++|||......      +...+.+. ++++  ++|+++||+.|++.|+|
T Consensus        74 ~~d~v~~G~-l~~~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~l~~~ll~--~~diltpN~~E~~~L~g  150 (271)
T 2i5b_A           74 GVDAMKTGM-LPTVDIIELAAKTIKEKQLKNVVIDPVMVCKGANEVLYPEHAQALREQLAP--LATVITPNLFEASQLSG  150 (271)
T ss_dssp             CCSEEEECC-CCSHHHHHHHHHHHHHTTCSSEEECCCCSSBCSSSBSSHHHHHHHHHHTGG--GCSEECCBHHHHHHHHT
T ss_pred             CCCEEEECC-CCCHHHHHHHHHHHHhCCCCCEEEcCCcCCCCCCcCcCHHHHHHHHHHhHh--hCcEEcCCHHHHHHHhC
Confidence            678888875 2356778888888999898 599998532100      01123444 5667  89999999999999875

>1ub0_A THID, phosphomethylpyrimidine kinase; thiamin biosynthesis, ribokinase family, phosphorylati structural genomics; 2.05A {Thermus thermophilus} SCOP: c.72.1.2

Probab=97.09  E-value=0.0012  Score=53.27  Aligned_cols=69  Identities=16%  Similarity=0.090  Sum_probs=47.8

Q ss_pred             CccEEEEEeccccHHHHHHHHHHHHHCC-CeEEEeCCchHH-----H-hhchhhH-HhhhcCCCccEEecCHHHHHhhhC
Q 026265          170 GSKWLVLRFGMFNFEVIQAAIRIAKQEG-LSVSMDLASFEM-----V-RNFRTPL-LQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       170 ~~~~v~~~~~~~~~~~~~~~~~~a~~~g-~~i~~D~~~~~~-----~-~~~~~~l-~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      +.+.+++.+. .+.+.+..+++.+++.+ ++++||+.....     . +...+.+ .++++  ++|+++||+.|++.|+|
T Consensus        70 ~~~~v~~G~l-~~~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~g~~l~~~~~~~~~~~~ll~--~~dil~pN~~E~~~L~g  146 (258)
T 1ub0_A           70 PLHAAKTGAL-GDAAIVEAVAEAVRRFGVRPLVVDPVMVAKSGDPLLAKEAAAALKERLFP--LADLVTPNRLEAEALLG  146 (258)
T ss_dssp             CCSEEEECCC-CSHHHHHHHHHHHHHTTCCSEEECCCC---------CHHHHHHHHHHTGG--GCSEECCBHHHHHHHHC
T ss_pred             CCCEEEECCc-CCHHHHHHHHHHHHhCCCCcEEECCeeecCCCCcccChHHHHHHHHhhcc--cCeEEeCCHHHHHHHhC
Confidence            4677777742 35677888888889888 899999964321     0 0111234 34666  89999999999999875

>3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A*

Probab=96.98  E-value=0.00079  Score=55.71  Aligned_cols=70  Identities=11%  Similarity=0.022  Sum_probs=48.8

Q ss_pred             CccEEEEEecc--ccHHHHHHHHHHHHHCCCeEEEeCCchHH-------HhhchhhHHhhhcCCCccEEecCHHHHHhhh
Q 026265          170 GSKWLVLRFGM--FNFEVIQAAIRIAKQEGLSVSMDLASFEM-------VRNFRTPLLQLLESGDVDLCFANEDEAAELV  240 (241)
Q Consensus       170 ~~~~v~~~~~~--~~~~~~~~~~~~a~~~g~~i~~D~~~~~~-------~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~  240 (241)
                      +.|.+.+.+..  ...+.+.++++.+++.+++++|||.....       .+...+.+.++++  ++|+++||+.|++.|+
T Consensus        77 ~~~aik~G~l~s~~~i~~v~~~l~~~~~~~~~vv~DPv~~~~g~l~~~~~~~~~~~~~~ll~--~adiitpN~~Ea~~L~  154 (291)
T 3mbh_A           77 QFDAIYTGYLGSPRQIQIVSDFIKDFRQPDSLIVADPVLGDNGRLYTNFDMEMVKEMRHLIT--KADVITPNLTELFYLL  154 (291)
T ss_dssp             CCSEEEECCCSSTTHHHHHHHHHHHHCCTTCEEEECCCCEETTEECTTCCHHHHHHHHHHGG--GCSEECCBHHHHHHHH
T ss_pred             ccCEEEECCCCCHHHHHHHHHHHHHhcCCCCcEEECceeeeCCCCCCCCCHHHHHHHHHHhc--cCCEEeCCHHHHHHHh
Confidence            68888888421  12466677777766668999999964421       0122234567887  9999999999999997


Q ss_pred             C
Q 026265          241 R  241 (241)
Q Consensus       241 g  241 (241)
                      |
T Consensus       155 g  155 (291)
T 3mbh_A          155 D  155 (291)
T ss_dssp             T
T ss_pred             C
Confidence            6

>3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A*

Probab=96.78  E-value=0.0027  Score=52.23  Aligned_cols=69  Identities=16%  Similarity=0.134  Sum_probs=47.3

Q ss_pred             CccEEEEEeccccHHHHHHHHHHHHHC-CCeEEEeCCchH-----H--HhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          170 GSKWLVLRFGMFNFEVIQAAIRIAKQE-GLSVSMDLASFE-----M--VRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       170 ~~~~v~~~~~~~~~~~~~~~~~~a~~~-g~~i~~D~~~~~-----~--~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      +.|.+.+.+. .+.+.+..+.+..++. +.+++|||.-..     .  .+...+.+.++++  ++|+++||..|++.|+|
T Consensus        74 ~~daik~G~l-~s~~~i~~v~~~l~~~~~~~vv~DPv~~~~g~l~~l~~~~~~~~l~~ll~--~adiitpN~~Ea~~L~g  150 (282)
T 3h74_A           74 HFDQALIGYV-GSVALCQQITTYLEQQTLSLLVVDPVLGDLGQLYQGFDQDYVAAMRQLIQ--QADVILPNTTEAALLTG  150 (282)
T ss_dssp             CCSEEEECCC-CSHHHHHHHHHHHHHSCCSEEEECCCCEETTEECTTCCHHHHHHHHHHGG--GCSEECCCHHHHHHHHT
T ss_pred             ccCEEEECCC-CCHHHHHHHHHHHHHCCCCcEEEcCeeecCCCCCCCCCHHHHHHHHHHhc--cCCEECCCHHHHHHHhC
Confidence            6888888843 2555565556555554 689999994221     0  1122344567787  99999999999999976

>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A*

Probab=96.57  E-value=0.0022  Score=52.87  Aligned_cols=71  Identities=17%  Similarity=-0.019  Sum_probs=47.0

Q ss_pred             CCccEEEEEecc--ccHHHHHHHHHHHHHCC--CeEEEeCCchH------HHhhchhhHHh-hhcCCCccEEecCHHHHH
Q 026265          169 KGSKWLVLRFGM--FNFEVIQAAIRIAKQEG--LSVSMDLASFE------MVRNFRTPLLQ-LLESGDVDLCFANEDEAA  237 (241)
Q Consensus       169 ~~~~~v~~~~~~--~~~~~~~~~~~~a~~~g--~~i~~D~~~~~------~~~~~~~~l~~-~l~~~~~d~l~~N~~Ea~  237 (241)
                      .+.|+++..+..  ...+.+.++++.+++.+  .++++||.-..      ..+...+.+.+ +++  ++|+++||+.|++
T Consensus        76 ~~~d~v~~G~l~~~~~~~~v~~~l~~~~~~~~~~~vv~DPVm~~~~~~~~~~~~~~~~l~~~ll~--~~diitpN~~E~~  153 (289)
T 3pzs_A           76 KDCDAVLSGYIGSPEQGSHILAAVAQVKQANPDAWYFCDPVMGHPEKGCIVAPGVAEFFCNEALP--ASDMIAPNLLELE  153 (289)
T ss_dssp             GGCCEEEECCCSSHHHHHHHHHHHHHHHHHCTTCEEEECCCCEETTTEECSCHHHHHHHHHTHHH--HCSEECCCHHHHH
T ss_pred             cCCCEEEECCCCCHHHHHHHHHHHHHHHhhCCCCeEEEcCccccCCCCcccCHHHHHHHHHHhhc--cCCEEeCCHHHHH
Confidence            578887666421  12466778888888766  78999972110      00112233443 566  8999999999999


Q ss_pred             hhhC
Q 026265          238 ELVR  241 (241)
Q Consensus       238 ~l~g  241 (241)
                      .|+|
T Consensus       154 ~L~g  157 (289)
T 3pzs_A          154 QLSG  157 (289)
T ss_dssp             HHHT
T ss_pred             HHhC
Confidence            9986

>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A

Probab=96.42  E-value=0.0026  Score=51.90  Aligned_cols=74  Identities=24%  Similarity=0.325  Sum_probs=49.8

Q ss_pred             hhhCCccEEEEEeccccH---HHHHHHHHHHHHCCCeEEEeCCchHHHhhchh-hHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          166 EDVKGSKWLVLRFGMFNF---EVIQAAIRIAKQEGLSVSMDLASFEMVRNFRT-PLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       166 ~~i~~~~~v~~~~~~~~~---~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~-~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      +.++.++.+.+...+.+.   +.+..+++.+++.++++++|+...... .++. ...++++. .+++++||..|+..|+|
T Consensus        52 ~~~~~~dalvi~~G~~~~~~~~~~~~~~~~a~~~~~pvVlDpv~~~~~-~~~~~~~~~ll~~-~~~vITPN~~E~~~L~g  129 (265)
T 1v8a_A           52 EMIRLADAVVINIGTLDSGWRRSMVKATEIANELGKPIVLDPVGAGAT-KFRTRVSLEILSR-GVDVLKGNFGEISALLG  129 (265)
T ss_dssp             HHHHHCSEEEEECTTCCHHHHHHHHHHHHHHHHHTCCEEEECTTBTTB-HHHHHHHHHHHHH-CCSEEEEEHHHHHHHHH
T ss_pred             HHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHcCCcEEEcCcccccc-ccCHHHHHHHHHh-CCcEEcCCHHHHHHHhC
Confidence            467789999999433343   355667777888899999999753110 1222 22334431 38999999999999875

>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}

Probab=96.28  E-value=0.011  Score=48.30  Aligned_cols=74  Identities=19%  Similarity=0.223  Sum_probs=51.1

Q ss_pred             hhhCCccEEEEEeccccH---HHHHHHHHHHHHCCCeEEEeCCchHHHhhchhh-HHhhhcCCCccEEecCHHHHHhhhC
Q 026265          166 EDVKGSKWLVLRFGMFNF---EVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTP-LLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       166 ~~i~~~~~v~~~~~~~~~---~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~-l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      +..+.++.+++...+...   +.+...++.+++.++++++||-..... .++.+ ..+++. ..+++|+||..|+..|+|
T Consensus        54 e~~~~a~alvIn~G~l~~~~~~~~~~a~~~a~~~~~PvVlDPVg~gas-~~r~~~~~~Ll~-~~~~VItpN~~E~~~L~g  131 (273)
T 3dzv_A           54 QMFQQTSALVLNLGHLSQEREQSLLAASDYARQVNKLTVVDLVGYGAS-DIRNEVGEKLVH-NQPTVVKGNLSEMRTFCQ  131 (273)
T ss_dssp             HHHTTCSEEEEECCSCCHHHHHHHHHHHHHHHHTTCCEEEECTTTTSC-HHHHHHHHHHHH-TCCSEEEEEHHHHHHHTT
T ss_pred             HHHHHCCeEEEecCCCChHHHHHHHHHHHHHHHcCCcEEEchhhcCCc-ccCHHHHHHHHh-cCCcEECCCHHHHHHHhC
Confidence            567889999999333343   456677777899999999999543211 22222 223332 378999999999999976

>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*

Probab=95.75  E-value=0.029  Score=50.29  Aligned_cols=75  Identities=20%  Similarity=0.139  Sum_probs=53.5

Q ss_pred             hhhCC-ccEEEEE-eccccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhh-HHhhhcCCCccEEecCHHHHHhhhC
Q 026265          166 EDVKG-SKWLVLR-FGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTP-LLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       166 ~~i~~-~~~v~~~-~~~~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~-l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      +..+. ++.++++ +.+.+.+.+..+++.+++.++++++||-..... .++.+ ..++++....++|+||..|+..|+|
T Consensus       301 e~~~~~~~alvin~G~l~~~~~~~~a~~~a~~~~~PvVlDPVg~~a~-~~r~~~~~~Ll~~~~~~vItpN~~E~~~L~g  378 (540)
T 3nl6_A          301 DLAAIPHATLLLNTGSVAPPEMLKAAIRAYNDVKRPIVFDPVGYSAT-ETRLLLNNKLLTFGQFSCIKGNSSEILGLAE  378 (540)
T ss_dssp             HHTTSTTCEEEEESSCSCCHHHHHHHHHHHHTTTCCEEEECTTCTTS-HHHHHHHHHHTTSCCCSEEEECHHHHHHHTT
T ss_pred             HHHhccCCeEEEeCCCCCHHHHHHHHHHHHHHcCCCEEEChHHhhcc-cccHHHHHHHHhhCCCeEECCCHHHHHHHhC
Confidence            45666 8999999 443346778888888899999999999543211 23333 3345542368999999999999976

>3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii}

Probab=95.29  E-value=0.017  Score=46.98  Aligned_cols=74  Identities=24%  Similarity=0.329  Sum_probs=50.6

Q ss_pred             hhhCCccEEEEEeccccH---HHHHHHHHHHHHCCCeEEEeCCchHHHhhchhh-HHhhhcCCCccEEecCHHHHHhhhC
Q 026265          166 EDVKGSKWLVLRFGMFNF---EVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTP-LLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       166 ~~i~~~~~v~~~~~~~~~---~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~-l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      +..+.++.++++....+.   +.+....+.+++.|++++|||-..... .+|.+ ..+++.. .+++|++|..|...|.|
T Consensus        52 e~~~~a~al~iNiGtl~~~~~~~m~~A~~~A~~~~~PvVLDPVg~gas-~~R~~~~~~ll~~-~~~vIrgN~sEi~~L~g  129 (265)
T 3hpd_A           52 EMIRLADAVVINIGTLDSGWRRSMVKATEIANELGKPIVLDPVGAGAT-KFRTRVSLEILSR-GVDVLKGNFGEISALLG  129 (265)
T ss_dssp             HHHHHCSEEEEECTTCCHHHHHHHHHHHHHHHHHTCCEEEECTTBTTB-HHHHHHHHHHHHH-CCSEEEEEHHHHHHHHH
T ss_pred             HHHHHCCeEEEECCCCChHHHHHHHHHHHHHHHcCCCEEEcCCCCCCc-HHHHHHHHHHHhc-CCcEEcCCHHHHHHHhc
Confidence            456678899999433343   456666778889999999999543211 23333 3334442 78999999999998864

>3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae}

Probab=94.90  E-value=0.041  Score=49.49  Aligned_cols=68  Identities=10%  Similarity=0.056  Sum_probs=44.6

Q ss_pred             CccEEEEEeccccH---HHHHHHHHHHHHCCCeEEEeCCchH------HHhhchhhHH-hhhcCCCccEEecCHHHHHhh
Q 026265          170 GSKWLVLRFGMFNF---EVIQAAIRIAKQEGLSVSMDLASFE------MVRNFRTPLL-QLLESGDVDLCFANEDEAAEL  239 (241)
Q Consensus       170 ~~~~v~~~~~~~~~---~~~~~~~~~a~~~g~~i~~D~~~~~------~~~~~~~~l~-~~l~~~~~d~l~~N~~Ea~~l  239 (241)
                      +.|.|.+++.  +.   +.+.++++..++.+.++++||.-..      ..+...+.+. ++++  .+|+++||..|++.|
T Consensus        91 ~~daIkiG~l--s~~~i~~v~~~l~~~~~~~~~vVlDPvm~a~~g~~l~~~~~~~~l~~~Ll~--~a~iitPN~~Ea~~L  166 (550)
T 3rm5_A           91 KCNVIKTGML--TAAAIEVLHEKLLQLGENRPKLVVDPVLVATSGSSLAGKDIVSLITEKVAP--FADILTPNIPECYKL  166 (550)
T ss_dssp             CCSEEEECSC--CHHHHHHHHHHHHHHGGGSCEEEECCCC---------CTTHHHHHHHHTGG--GCSEECCBHHHHHHH
T ss_pred             CCCEEEECCC--CHHHHHHHHHHHHHhcccCCCEEEecceecCCCCcCCCHHHHHHHHHHhhC--cceEEecCHHHHHHH
Confidence            6888888843  43   4455555555555889999994221      0011122344 5667  999999999999999


Q ss_pred             hC
Q 026265          240 VR  241 (241)
Q Consensus       240 ~g  241 (241)
                      +|
T Consensus       167 ~g  168 (550)
T 3rm5_A          167 LG  168 (550)
T ss_dssp             HS
T ss_pred             hC
Confidence            86

>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*

Probab=93.63  E-value=0.13  Score=45.60  Aligned_cols=71  Identities=18%  Similarity=0.170  Sum_probs=46.6

Q ss_pred             hhhCCccEEEEEeccccHHHHHHHHH-HHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          166 EDVKGSKWLVLRFGMFNFEVIQAAIR-IAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       166 ~~i~~~~~v~~~~~~~~~~~~~~~~~-~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      +.++.++.+.++-.+...+...++++ .+++.++++++|+....   ...+++.+...  ..++++||..|++.|+|
T Consensus       316 ~~~~~~davviGpGlg~~~~~~~~~~~~l~~~~~pvVlDadgl~---~l~~~ll~~~~--~~~vlTPN~~E~~~L~g  387 (502)
T 3rss_A          316 ELSKDVDVVAIGPGLGNNEHVREFVNEFLKTLEKPAVIDADAIN---VLDTSVLKERK--SPAVLTPHPGEMARLVK  387 (502)
T ss_dssp             HHHTTCSEEEECTTCCCSHHHHHHHHHHHHHCCSCEEECHHHHH---TCCHHHHHHCS--SCEEECCCHHHHHHHHT
T ss_pred             HHhccCCEEEEeCCCCCCHHHHHHHHHHHHhcCCCEEEeCcccc---hhcHHHHhccC--CCEEEeCCHHHHHHHhC
Confidence            35688999999933223233344444 45667999999996542   12123333333  67999999999999976

>3rpz_A ADP/ATP-dependent NAD(P)H-hydrate dehydratase; structural genomics, PSI-biology; HET: AMP NPW; 1.51A {Bacillus subtilis} PDB: 3rph_A* 3rq2_A* 3rq5_A* 3rq6_A* 3rq8_A* 3rqh_A* 3rqq_A* 3rqx_A* 1kyh_A

Probab=93.37  E-value=0.058  Score=44.18  Aligned_cols=66  Identities=11%  Similarity=0.043  Sum_probs=45.7

Q ss_pred             hhCCccEEEEEeccccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhc-CCCccEEecCHHHHHhhhC
Q 026265          167 DVKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLE-SGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       167 ~i~~~~~v~~~~~~~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~-~~~~d~l~~N~~Ea~~l~g  241 (241)
                      .++++|++.+.-.+-..+...++++.+.+.+.++++|.+..    +.     +.++ ....++++||..|++.|+|
T Consensus        95 ~l~~~davviGPGlg~~~~~~~~~~~~l~~~~p~VlDAdal----~~-----~~l~~~~~~~vlTPN~~E~~~L~g  161 (279)
T 3rpz_A           95 LEETYRAIAIGPGLPQTESVQQAVDHVLTADCPVILDAGAL----AK-----RTYPKREGPVILTPHPGEFFRMTG  161 (279)
T ss_dssp             CSSCCSEEEECTTCCCCHHHHHHHHHHTTSSSCEEECGGGC----CS-----CCCCCCSSCEEECCCHHHHHHHHC
T ss_pred             hccCCCEEEECCCCCCCHHHHHHHHHHHhhCCCEEEECCcc----ch-----hhhhhccCCEEEecCHHHHHHHhC
Confidence            35789999999322233455677777777889999999644    12     1111 1267999999999999976

>2r3b_A YJEF-related protein; putative kinase in the ribokinase-like superfamily, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Enterococcus faecalis} PDB: 2r3e_A

Probab=92.83  E-value=0.14  Score=42.55  Aligned_cols=70  Identities=9%  Similarity=0.081  Sum_probs=41.7

Q ss_pred             hhCCccEEEEEeccc-cH---HHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          167 DVKGSKWLVLRFGMF-NF---EVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       167 ~i~~~~~v~~~~~~~-~~---~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      .++.++.+.++-.+. +.   +.+.++++.++ .++++++|++....... +.   ++++.+..++++||..|++.|+|
T Consensus       108 ~~~~~dav~IG~Gl~~~~~~~~~v~~~l~~~~-~~~pvVlDa~g~~ll~~-~~---~~l~~~~~~viTPN~~E~~~L~g  181 (310)
T 2r3b_A          108 VVEQADVILIGPGLGLDATAQQILKMVLAQHQ-KQQWLIIDGSAITLFSQ-GN---FSLTYPEKVVFTPHQMEWQRLSH  181 (310)
T ss_dssp             HHHHCSEEEECTTCCSSHHHHHHHHHHHHHCC-TTCEEEEETHHHHHHHH-TT---CCCSSGGGEEEECCHHHHHHHHC
T ss_pred             HhccCCEEEEeCCCCCCHHHHHHHHHHHHhcC-CCCcEEEcCCcchhccc-ch---hhhcCCCCEEEcCCHHHHHHHhC
Confidence            345788999983222 33   33344443322 48899999965432111 11   11211267999999999999976

>3bgk_A SMU.573, putative uncharacterized protein; alpha/beta three layer sandwich, unknown function; 2.50A {Streptococcus mutans}

Probab=90.64  E-value=0.15  Score=42.38  Aligned_cols=70  Identities=9%  Similarity=0.161  Sum_probs=40.7

Q ss_pred             hhCCccEEEEEeccc-cH---HHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          167 DVKGSKWLVLRFGMF-NF---EVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       167 ~i~~~~~v~~~~~~~-~~---~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      .++..+.+.++-.+. +.   +.+.++++.++ .++++++|++....... +..+  +++ +..++++||..|++.|+|
T Consensus       122 ~~~~~dav~IG~Gl~~~~~~~~~v~~~l~~~~-~~~pvVlDa~g~~ll~~-~~~l--~L~-~~~~viTPN~~E~~~L~g  195 (311)
T 3bgk_A          122 QITAADVVLMGPGLAEDDLAQTTFDVVWQAIE-PKQTLIIDGSAINLLAK-RKPA--IWP-TKQIILTPHQKEWERLSG  195 (311)
T ss_dssp             HHHHCSEEEECTTCCSSHHHHHHHHHHHHHCC-TTSEEEEETHHHHHHHH-CC-C--CCS-CSCEEEECCSCC-CTTTC
T ss_pred             HhccCCEEEEcCCCCCCHHHHHHHHHHHHHcC-CCCeEEEeCChhhhhcc-Chhh--cCC-CCCEEECCcHHHHHHHhC
Confidence            455788999983222 33   33344443322 47899999965432111 1111  032 278999999999999875

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	241
d2absa1	350	c.72.1.1 (A:10-359) Adenosine kinase {Toxoplasma g	5e-14
d1bx4a_	342	c.72.1.1 (A:) Adenosine kinase {Human (Homo sapien	3e-10
d1vk4a_	288	c.72.1.1 (A:) Hypothetical protein TM0415 {Thermot	7e-10
d2afba1	333	c.72.1.1 (A:-2-330) 2-keto-3-deoxygluconate kinase	1e-07
d1tyya_	304	c.72.1.1 (A:) Aminoimidazole riboside kinase {Salm	5e-07
d1v19a_	302	c.72.1.1 (A:) 2-keto-3-deoxygluconate kinase {Ther	2e-06
d2ajra1	319	c.72.1.1 (A:1-319) Putative sugar kinase TM0828 {T	2e-06
d2dcna1	308	c.72.1.1 (A:2-309) Hypothetical fructokinase ST247	5e-04
d1vm7a_	299	c.72.1.1 (A:) Ribokinase {Thermotoga maritima [Tax	0.002
d2abqa1	306	c.72.1.1 (A:1-306) Fructose 1-phosphate kinase Fru	0.002

>d2absa1 c.72.1.1 (A:10-359) Adenosine kinase {Toxoplasma gondii [TaxId: 5811]} Length = 350

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Ribokinase-like
domain: Adenosine kinase
species: Toxoplasma gondii [TaxId: 5811]

 Score = 67.9 bits (164), Expect = 5e-14
 Identities = 42/219 (19%), Positives = 78/219 (35%), Gaps = 13/219 (5%)

Query: 25  ALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTN 84
            ++D VA V  S LD+   +RG +     E++  I S +            ++ GGS  N
Sbjct: 12  PILDLVAEVPSSFLDEFFLKRGDATLATPEQMR-IYSTLDQF------NPTSLPGGSALN 64

Query: 85  TIRGLS--VGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDA 142
           ++R +   +      G +GA GDD +GQ+        G+    +      TG C  L++ 
Sbjct: 65  SVRVVQKLLRKPGSAGYMGAIGDDPRGQVLKELCDKEGLATRFMVAPGQSTGVCAVLINE 124

Query: 143 SGNR--TMRPCLSNAVKIQADELIAEDVKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSV 200
                 T      +    +     A                    ++ A           
Sbjct: 125 KERTLCTHLGACGSFRLPEDWTTFASGALIFYATAYTLTATPKNALEVAGYAHGIPNAIF 184

Query: 201 SMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAEL 239
           +++L++   V  ++  +  L      ++ F NE+E A L
Sbjct: 185 TLNLSAPFCVELYKDAMQSL--LLHTNILFGNEEEFAHL 221

>d1bx4a_ c.72.1.1 (A:) Adenosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Ribokinase-like
domain: Adenosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.1 bits (136), Expect = 3e-10
 Identities = 43/231 (18%), Positives = 84/231 (36%), Gaps = 18/231 (7%)

Query: 17  LILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKT 76
           ++ G+    L+D  A VD   LD+   +    I    +  E          L +   ++ 
Sbjct: 5   ILFGMG-NPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDE------LVKKFKVEY 57

Query: 77  IAGGSVTNTIRGLSVGFGVPCG---LIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPT 133
            AGGS  N+I+        P       G  G D+ G++       + VD         PT
Sbjct: 58  HAGGSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPT 117

Query: 134 GQCVCLVDASGNRTMRPCLSNAVKIQADEL----IAEDVKGSK--WLVLRFGMFNFEVIQ 187
           G C   +       +    +     +   L        V+ ++  ++   F   + E + 
Sbjct: 118 GTCAACITGDNRSLIANLAAANCYKKEKHLDLEKNWMLVEKARVCYIAGFFLTVSPESVL 177

Query: 188 AAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAE 238
                A +     +++L++  + + ++  L+++     VD+ F NE EAA 
Sbjct: 178 KVAHHASENNRIFTLNLSAPFISQFYKESLMKV--MPYVDILFGNETEAAT 226

>d1vk4a_ c.72.1.1 (A:) Hypothetical protein TM0415 {Thermotoga maritima [TaxId: 2336]} Length = 288

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Ribokinase-like
domain: Hypothetical protein TM0415
species: Thermotoga maritima [TaxId: 2336]

 Score = 55.7 bits (133), Expect = 7e-10
 Identities = 29/171 (16%), Positives = 58/171 (33%), Gaps = 14/171 (8%)

Query: 74  IKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPT 133
            +   GG V       S   GV   +I     +   +   S ++ +GV+V  L+  R  +
Sbjct: 26  REIAYGGGVVMGAITSS-LLGVKTKVITKCTREDVSKF--SFLRDNGVEVVFLKSPRTTS 82

Query: 134 GQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLVLRFGMFNFEVIQAAIRIA 193
                   +  +      +S A      +L   +       V    ++  E  +  I + 
Sbjct: 83  --IENRYGSDPDTRESFLISAADPFTESDLAFIE----GEAVHINPLWYGEFPEDLIPVL 136

Query: 194 KQEGLSVSMDLASFEMVRNFRTPLLQLLESGD-----VDLCFANEDEAAEL 239
           +++ + +S D   F  V      + +  E  +     +DL   +  EA  L
Sbjct: 137 RRKVMFLSADAQGFVRVPENEKLVYRDWEMKEKYLKYLDLFKVDSREAETL 187

>d2afba1 c.72.1.1 (A:-2-330) 2-keto-3-deoxygluconate kinase {Thermotoga maritima, TM0067 [TaxId: 2336]} Length = 333

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Ribokinase-like
domain: 2-keto-3-deoxygluconate kinase
species: Thermotoga maritima, TM0067 [TaxId: 2336]

 Score = 49.3 bits (116), Expect = 1e-07
 Identities = 25/176 (14%), Positives = 60/176 (34%), Gaps = 11/176 (6%)

Query: 74  IKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPT 133
                GG+  N    L+   G+    +    ++  G     +++  GV    +       
Sbjct: 30  FDVTYGGAEANVAAFLA-QMGLDAYFVTKLPNNPLGDAAAGHLRKFGVKTDYIARGGNRI 88

Query: 134 GQCVCLVDASGNRTM---RPCLSNAVKIQADELI------AEDVKGSKWLVLRFGMFNFE 184
           G     + AS   +        S   + + ++                 +    G     
Sbjct: 89  GIYFLEIGASQRPSKVVYDRAHSAISEAKREDFDWEKILDGARWFHFSGITPPLGKELPL 148

Query: 185 VIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLES-GDVDLCFANEDEAAEL 239
           +++ A+++A ++G++VS DL     +         ++     VD+  ANE++  ++
Sbjct: 149 ILEDALKVANEKGVTVSCDLNYRARLWTKEEAQKVMIPFMEYVDVLIANEEDIEKV 204

>d1tyya_ c.72.1.1 (A:) Aminoimidazole riboside kinase {Salmonella typhimurium [TaxId: 90371]} Length = 304

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Ribokinase-like
domain: Aminoimidazole riboside kinase
species: Salmonella typhimurium [TaxId: 90371]

 Score = 47.1 bits (110), Expect = 5e-07
 Identities = 28/156 (17%), Positives = 51/156 (32%), Gaps = 6/156 (3%)

Query: 67  ILDEPSPIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRL 126
           + ++ +      GG+  N    ++   G  CG IG  GDD  G+      Q +GVDV+ L
Sbjct: 14  VPEKQNSYLKCPGGASANVGVCVA-RLGGECGFIGCLGDDDAGRFLRQVFQDNGVDVTFL 72

Query: 127 RMK-RGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLVL----RFGMF 181
           R+     +   +  + A G R+    +                +  +W            
Sbjct: 73  RLDADLTSAVLIVNLTADGERSFTYLVHPGADTYVSPQDLPPFRQYEWFYFSSIGLTDRP 132

Query: 182 NFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPL 217
             E      R  ++ G  V  D+     +      +
Sbjct: 133 AREACLEGARRMREAGGYVLFDVNLRSKMWGNTDEI 168

>d1v19a_ c.72.1.1 (A:) 2-keto-3-deoxygluconate kinase {Thermus thermophilus [TaxId: 274]} Length = 302

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Ribokinase-like
domain: 2-keto-3-deoxygluconate kinase
species: Thermus thermophilus [TaxId: 274]

 Score = 45.9 bits (107), Expect = 2e-06
 Identities = 28/147 (19%), Positives = 54/147 (36%), Gaps = 8/147 (5%)

Query: 74  IKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVS--RLRMKRG 131
           ++   GG+  N    L+   GV  G +G  G+D+ G +    ++  GVD++  R      
Sbjct: 28  LEVYVGGAEVNVAVALA-RLGVKVGFVGRVGEDELGAMVEERLRAEGVDLTHFRRAPGFT 86

Query: 132 PTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLVLRFGMFNF-----EVI 186
                  L    G        S    +       + ++G ++L L               
Sbjct: 87  GLYLREYLPLGQGRVFYYRKGSAGSALAPGAFDPDYLEGVRFLHLSGITPALSPEARAFS 146

Query: 187 QAAIRIAKQEGLSVSMDLASFEMVRNF 213
             A+  AK+ G+ VS+D+   + + + 
Sbjct: 147 LWAMEEAKRRGVRVSLDVNYRQTLWSP 173

>d2ajra1 c.72.1.1 (A:1-319) Putative sugar kinase TM0828 {Thermotoga maritima [TaxId: 2336]} Length = 319

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Ribokinase-like
domain: Putative sugar kinase TM0828
species: Thermotoga maritima [TaxId: 2336]

 Score = 45.4 bits (106), Expect = 2e-06
 Identities = 18/123 (14%), Positives = 40/123 (32%), Gaps = 8/123 (6%)

Query: 60  LSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFS 119
               + + +++ S  +   GG   N    LS   GVP    G  G    G++ V  ++  
Sbjct: 20  FQVNRLYRINDLSKTQMSPGGKGINVSIALS-KLGVPSVATGFVGGYM-GKILVEELRKI 77

Query: 120 GVDVS-RLRMKRGPTGQCVCLVDASGNRT-----MRPCLSNAVKIQADELIAEDVKGSKW 173
              ++       G T + + ++D             P +++             +     
Sbjct: 78  SKLITTNFVYVEGETRENIEIIDEKNKTITAINFPGPDVTDMDVNHFLRRYKMTLSKVDC 137

Query: 174 LVL 176
           +V+
Sbjct: 138 VVI 140

>d2dcna1 c.72.1.1 (A:2-309) Hypothetical fructokinase ST2478 {Sulfolobus tokodaii [TaxId: 111955]} Length = 308

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Ribokinase-like
domain: Hypothetical fructokinase ST2478
species: Sulfolobus tokodaii [TaxId: 111955]

 Score = 38.3 bits (87), Expect = 5e-04
 Identities = 18/71 (25%), Positives = 27/71 (38%), Gaps = 1/71 (1%)

Query: 68  LDEPSPIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLR 127
           L   S  +    GS  N         G  CG+I   GDD+ G   +  ++  GVDVS ++
Sbjct: 21  LRHVSYFEKHVAGSEANYCVAFI-KQGNECGIIAKVGDDEFGYNAIEWLRGQGVDVSHMK 79

Query: 128 MKRGPTGQCVC 138
           +          
Sbjct: 80  IDPSAPTGIFF 90

>d1vm7a_ c.72.1.1 (A:) Ribokinase {Thermotoga maritima [TaxId: 2336]} Length = 299

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Ribokinase-like
domain: Ribokinase
species: Thermotoga maritima [TaxId: 2336]

 Score = 36.2 bits (82), Expect = 0.002
 Identities = 18/103 (17%), Positives = 36/103 (34%), Gaps = 2/103 (1%)

Query: 74  IKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPT 133
           +    GG   N    ++      C  +   G+D    L + N +  G+          PT
Sbjct: 34  MNVFPGGKGANQAVTVAKIGEKGCRFVTCIGNDDYSDLLIENYEKLGIT--GYIRVSLPT 91

Query: 134 GQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLVL 176
           G+    VD +G   +        +++ + +    +  S  L+L
Sbjct: 92  GRAFIEVDKTGQNRIIIFPGANAELKKELIDWNTLSESDILLL 134

>d2abqa1 c.72.1.1 (A:1-306) Fructose 1-phosphate kinase FruB {Bacillus halodurans [TaxId: 86665]} Length = 306

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Ribokinase-like
domain: Fructose 1-phosphate kinase FruB
species: Bacillus halodurans [TaxId: 86665]

 Score = 36.2 bits (82), Expect = 0.002
 Identities = 22/145 (15%), Positives = 46/145 (31%), Gaps = 5/145 (3%)

Query: 72  SPIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG 131
              +   GG   N  R L    G     +G  G    G    + ++   + +S + ++  
Sbjct: 29  ERDRKQPGGKGINVSRVLK-RLGHETKALGFLGGF-TGAYVRNALEKEEIGLSFIEVEGD 86

Query: 132 PTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLVLRFGMFN---FEVIQA 188
                               L     +QA      +++    LVL   +       + ++
Sbjct: 87  TRINVKIKGKQETELNGTAPLIKKEHVQALLEQLTELEKGDVLVLAGSVPQAMPQTIYRS 146

Query: 189 AIRIAKQEGLSVSMDLASFEMVRNF 213
             +IAK+ G  V++D +   +    
Sbjct: 147 MTQIAKERGAFVAVDTSGEALHEVL 171

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	241
d2absa1	350	Adenosine kinase {Toxoplasma gondii [TaxId: 5811]}	99.97
d1bx4a_	342	Adenosine kinase {Human (Homo sapiens) [TaxId: 960	99.96
d2afba1	333	2-keto-3-deoxygluconate kinase {Thermotoga maritim	99.9
d1vm7a_	299	Ribokinase {Thermotoga maritima [TaxId: 2336]}	99.87
d2ajra1	319	Putative sugar kinase TM0828 {Thermotoga maritima	99.87
d2f02a1	313	Tagatose-6-phosphate kinase LacC {Enterococcus fae	99.86
d1v19a_	302	2-keto-3-deoxygluconate kinase {Thermus thermophil	99.86
d1rkda_	306	Ribokinase {Escherichia coli [TaxId: 562]}	99.85
d2fv7a1	308	Ribokinase {Human (Homo sapiens) [TaxId: 9606]}	99.84
d2abqa1	306	Fructose 1-phosphate kinase FruB {Bacillus halodur	99.83
d2dcna1	308	Hypothetical fructokinase ST2478 {Sulfolobus tokod	99.81
d1tyya_	304	Aminoimidazole riboside kinase {Salmonella typhimu	99.8
d1vk4a_	288	Hypothetical protein TM0415 {Thermotoga maritima [	99.7
d1u2xa_	450	ADP-specific phosphofructokinase {Pyrococcus horik	97.21
d1gc5a_	467	ADP-dependent glucokinase {Archaeon Thermococcus l	96.98
d1ua4a_	454	ADP-dependent glucokinase {Archaeon Pyrococcus fur	96.67
d1ekqa_	269	Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Ba	96.6
d1l2la_	451	ADP-dependent glucokinase {Archaeon Thermococcus l	96.24
d1v8aa_	264	Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Ar	96.09
d1lhpa_	309	Pyridoxal kinase {Sheep (Ovis aries) [TaxId: 9940]	95.17
d1vi9a_	288	Pyridoxamine kinase {Escherichia coli [TaxId: 562]	94.12
d1ub0a_	258	4-amino-5-hydroxymethyl-2-methylpyrimidine phospha	91.96
d1jxha_	266	4-amino-5-hydroxymethyl-2-methylpyrimidine phospha	90.84
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	85.99
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	85.71
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	85.48
d1kyha_	275	Hypothetical protein YxkO {Bacillus subtilis [TaxI	83.89
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	83.35

>d2absa1 c.72.1.1 (A:10-359) Adenosine kinase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Ribokinase-like
domain: Adenosine kinase
species: Toxoplasma gondii [TaxId: 5811]

Probab=99.97  E-value=3.5e-29  Score=212.27  Aligned_cols=215  Identities=21%  Similarity=0.292  Sum_probs=175.7

Q ss_pred             CCCeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhc
Q 026265           14 QAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGF   93 (241)
Q Consensus        14 ~~~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~L   93 (241)
                      .+.+|+||| +++||+++++++++|+++++++|++++++.++.. ++..+..      ......+||+++|+|++++ +|
T Consensus         2 ~p~kil~iG-~~~vD~~~~v~~~~l~~~~~~~g~~~~~~~~~~~-~~~~~~~------~~~~~~~GG~~~N~a~~la-~L   72 (350)
T d2absa1           2 GPMRVFAIG-NPILDLVAEVPSSFLDEFFLKRGDATLATPEQMR-IYSTLDQ------FNPTSLPGGSALNSVRVVQ-KL   72 (350)
T ss_dssp             CCCCEEEEC-CCEEEEEEECCHHHHHHTTCCTTCEEECCGGGGG-GGGTGGG------GCCEEEEESHHHHHHHHHH-HH
T ss_pred             CCcEEEEEC-CceEEEEEEeCHHHHHHcCCCCCcceecCHHHHH-HHHhhhc------cCceEecCcHHHHHHHHHH-Hh
Confidence            456899999 9999999999999999999999999998866443 4444332      2567889999999999999 89


Q ss_pred             ---CCceeEEeeecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEEEcCCCCeeeeeCccccCCCCcccCChhhhCC
Q 026265           94 ---GVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKG  170 (241)
Q Consensus        94 ---G~~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~~~~i~~  170 (241)
                         |..+.|+|.||+|.+|+++++.|+++||++.++...+.+|+.|+++++ +++|+++.+.++...+...+.....+..
T Consensus        73 ~~~g~~~~~ig~vG~D~~G~~i~~~l~~~gv~~~~~~~~~~~t~~~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (350)
T d2absa1          73 LRKPGSAGYMGAIGDDPRGQVLKELCDKEGLATRFMVAPGQSTGVCAVLIN-EKERTLCTHLGACGSFRLPEDWTTFASG  151 (350)
T ss_dssp             HCSTTSEEEEEEECSSHHHHHHHHHHHHHTCEEEEEECTTCCCEEEEEEEE-TTEEEEEEECGGGGGCCCCTTHHHHTTT
T ss_pred             ccCCccEEEEecCCCChhhHhHHHHHHhcCCcccccccccccceEEEEEee-ccCcceEeeecccccccccccccccccc
Confidence               778999999999999999999999999999887766568999999997 6788888887777777766666677888


Q ss_pred             ccEEEEEe-ccc-c-HHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhh
Q 026265          171 SKWLVLRF-GMF-N-FEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELV  240 (241)
Q Consensus       171 ~~~v~~~~-~~~-~-~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~  240 (241)
                      .++++..+ .+. . ......+...++..+..+.+|++.......++..+..++.  ++|++++|++|++.|+
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~di~~~N~~E~~~l~  222 (350)
T d2absa1         152 ALIFYATAYTLTATPKNALEVAGYAHGIPNAIFTLNLSAPFCVELYKDAMQSLLL--HTNILFGNEEEFAHLA  222 (350)
T ss_dssp             CCEEEEEGGGGTTCHHHHHHHHHHHHTSTTCEEEEECCCHHHHHHCHHHHHHHHH--TCSEEEEEHHHHHHHH
T ss_pred             cccccceeeeeccccchhHHHHHHhhhhccceEEEecchhhhhhhhhcchhhhcc--cCCEEEecHHHHHHHh
Confidence            99999983 221 2 3344445556677788999999887665566777777888  9999999999999875

>d1bx4a_ c.72.1.1 (A:) Adenosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Ribokinase-like
domain: Adenosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.8e-28  Score=206.18  Aligned_cols=217  Identities=19%  Similarity=0.284  Sum_probs=175.5

Q ss_pred             CCeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHH----HH
Q 026265           15 AALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRG----LS   90 (241)
Q Consensus        15 ~~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~----la   90 (241)
                      +..|+||| +++||+++++++.||+++++++|++++++... ..++.++..     .......+||+++|+|.+    ++
T Consensus         3 ~~~il~iG-~~~vD~~~~vd~~~l~~~~~~~~~~~~~~~~~-~~~~~~l~~-----~~~~~~~~GG~~~N~a~~~a~~l~   75 (342)
T d1bx4a_           3 ENILFGMG-NPLLDISAVVDKDFLDKYSLKPNDQILAEDKH-KELFDELVK-----KFKVEYHAGGSTQNSIKVAQWMIQ   75 (342)
T ss_dssp             TTCEEEEC-CCEEEEEEECCHHHHHHTTCCSSEEEECCGGG-HHHHHHHHH-----HSCCEEEEECHHHHHHHHHHHHHC
T ss_pred             CCEEEEEC-cceEEEEEEeCHHHHHHcCCCCCceeechhhH-HHHHHHhhc-----ccceEEeCCcHHHHHHHHHHHhcc
Confidence            46799999 99999999999999999999999988877543 222222211     136788999999998776    57


Q ss_pred             hhcCCceeEEeeecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEEEcCCCCeeeeeCccccCCCCcccCC----hh
Q 026265           91 VGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELI----AE  166 (241)
Q Consensus        91 ~~LG~~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~----~~  166 (241)
                       +||.++.|+|.+|+|.+|+++++.|++.||+++++.+.+.+|+.+++++++++++.+..+.++....+.++..    ..
T Consensus        76 -~lG~~~~~ig~vG~D~~G~~i~~~l~~~GVd~~~i~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (342)
T d1bx4a_          76 -QPHKAATFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTCAACITGDNRSLIANLAAANCYKKEKHLDLEKNWM  154 (342)
T ss_dssp             -SSTTCEEEEEEEESSHHHHHHHHHHHHTTCEEEEEEESSSCCCEEEEEEETTEEEEEEECGGGGGCCGGGTTTSHHHHH
T ss_pred             -ccCceEEEEeecCCChhhhhhhhhhhhhcccceeeeeecccceEEEEEecCCccceeeeccccccccchhhhhhhhhHH
Confidence             7999999999999999999999999999999999998878898999988877777777776665555544433    23


Q ss_pred             hhCCccEEEEE-ecc-ccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          167 DVKGSKWLVLR-FGM-FNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       167 ~i~~~~~v~~~-~~~-~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      .++.++++++. +.. ...+....+++.+++.+..+++|+......+.+++.+.++++  ++|++++|++|++.|+|
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~dil~~Ne~Ea~~l~~  229 (342)
T d1bx4a_         155 LVEKARVCYIAGFFLTVSPESVLKVAHHASENNRIFTLNLSAPFISQFYKESLMKVMP--YVDILFGNETEAATFAR  229 (342)
T ss_dssp             HHHHCSEEEEEGGGGGTCHHHHHHHHHHHHHTTCEEEEECCSHHHHHHTHHHHHHHGG--GCSEEEEEHHHHHHHHH
T ss_pred             HHhhcccceecccccchhHHHHHHHHHHhhhccceeecccccccchhccccchhhhhc--cccEEeecHHHHHHhhC
Confidence            57889999999 322 346777788888999999999999877655566777778888  99999999999998864

>d1vm7a_ c.72.1.1 (A:) Ribokinase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Ribokinase-like
domain: Ribokinase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.87  E-value=2e-21  Score=160.63  Aligned_cols=182  Identities=21%  Similarity=0.290  Sum_probs=145.9

Q ss_pred             CeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCC
Q 026265           16 ALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGV   95 (241)
Q Consensus        16 ~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~   95 (241)
                      -+|+++| ++++|+++.+     +++|.+ |....                    .......+||+++|+|++|+ +||.
T Consensus         3 m~I~ViG-~~~~D~~~~v-----~~~p~~-g~~~~--------------------~~~~~~~~GG~~~Nva~~l~-~lG~   54 (299)
T d1vm7a_           3 LVISVVG-SSNIDIVLKV-----DHFTKP-GETQK--------------------AIEMNVFPGGKGANQAVTVA-KIGE   54 (299)
T ss_dssp             CCEEEEC-CCEEEEEEEC-----SSCCCT-TCEEE--------------------CSEEEEEEECHHHHHHHHHH-HHHS
T ss_pred             eEEEEeC-eeeEEEEEEe-----CCCCCC-CcEEe--------------------eeeEEEecCCHHHHHHHHHH-HcCC
Confidence            4799999 9999999999     577754 33221                    13688899999999999999 8999


Q ss_pred             c-eeEEeeecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEEEcCCCCeeeeeCccccCCCCcccCChhhhCCccEE
Q 026265           96 P-CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWL  174 (241)
Q Consensus        96 ~-~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~~~~i~~~~~v  174 (241)
                      + |.|+|.+|+|.+|+++++.|++.||++..+  .+.+|+.+.+.++++|+|+++.+.+....++.++++...+...+++
T Consensus        55 ~~~~~i~~vG~D~~g~~~~~~l~~~gv~~~~~--~~~~t~~~~i~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  132 (299)
T d1vm7a_          55 KGCRFVTCIGNDDYSDLLIENYEKLGITGYIR--VSLPTGRAFIEVDKTGQNRIIIFPGANAELKKELIDWNTLSESDIL  132 (299)
T ss_dssp             SCEEEEEEECSSHHHHHHHHHHHHTTEEEEEE--CSSCCCEEEEEECTTSCEEEEEECGGGGGCCGGGCCHHHHTTCSEE
T ss_pred             CceEEEEeeeccchhHHHHHHHhhhccccccc--cccccceeEEEecCCCCeeEeccCCcchhCCHhHhChhhcccccce
Confidence            7 899999999999999999999999987644  3457999999999899999988888888899999988889999999


Q ss_pred             EEEeccccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhh
Q 026265          175 VLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAEL  239 (241)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l  239 (241)
                      +++... +..   ...+..++.+.++++|..+..   ...+   .+++  .+|++++|.+|+...
T Consensus       133 ~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~---~~~~---~~~~--~~~~~~~~~~e~~~~  185 (299)
T d1vm7a_         133 LLQNEI-PFE---TTLECAKRFNGIVIFDPAPAQ---GINE---EIFQ--YLDYLTPNEKEIEAL  185 (299)
T ss_dssp             EECSSS-CHH---HHHHHHHHCCSEEEECCCSCT---TCCG---GGGG--GCSEECCBHHHHHHH
T ss_pred             eecccc-cch---hhhHhhhhcCceEEEecCcch---hhhH---HHHh--hcccccccHHHHHhh
Confidence            998432 322   234456778899999986542   2222   2344  899999999998765

>d2ajra1 c.72.1.1 (A:1-319) Putative sugar kinase TM0828 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Ribokinase-like
domain: Putative sugar kinase TM0828
species: Thermotoga maritima [TaxId: 2336]

Probab=99.87  E-value=5.1e-22  Score=166.56  Aligned_cols=190  Identities=14%  Similarity=0.174  Sum_probs=136.7

Q ss_pred             eEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCCc
Q 026265           17 LILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVP   96 (241)
Q Consensus        17 ~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~~   96 (241)
                      +|+++|+||++|+++++     ++++.  +.....                 .........+||+++|+|++++ +||.+
T Consensus         1 mi~t~~lnp~iD~~~~v-----~~l~~--~~~~~~-----------------~~~~~~~~~~GG~~~NvA~~la-~LG~~   55 (319)
T d2ajra1           1 MVLTVTLNPALDREIFI-----EDFQV--NRLYRI-----------------NDLSKTQMSPGGKGINVSIALS-KLGVP   55 (319)
T ss_dssp             CEEEEESSCEEEEEEEC-----TTCCS--SCEEEC-----------------CSGGGEEEEEESHHHHHHHHHH-HTTCC
T ss_pred             CEEEEeCChHHcEEEEE-----CCccC--CCceee-----------------eecceeeECCCCHHHHHHHHHH-HCCCC
Confidence            47888989999999999     45532  111110                 0113678899999999999999 89999


Q ss_pred             eeEEeeecCChhHHHHHHHHHhCCceeecee-ecCCCceeEEEEEcCCCCeee-eeCccccCCCCcccCC------hhhh
Q 026265           97 CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLR-MKRGPTGQCVCLVDASGNRTM-RPCLSNAVKIQADELI------AEDV  168 (241)
Q Consensus        97 ~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~-~~~~~T~~~~~~~~~~g~r~~-~~~~g~~~~l~~~~~~------~~~i  168 (241)
                      +.+++.+|+ ++|+.+.+.|++.|+++.... ..+++|++|+.+++.++++.+ +.+++  ..++..+.+      ...+
T Consensus        56 ~~~~~~vG~-d~g~~~~~~L~~~~~~i~~~~i~~~~~T~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  132 (319)
T d2ajra1          56 SVATGFVGG-YMGKILVEELRKISKLITTNFVYVEGETRENIEIIDEKNKTITAINFPG--PDVTDMDVNHFLRRYKMTL  132 (319)
T ss_dssp             EEEEEEEEH-HHHHHHHHHHHHHCTTEEEEEEEESSCCEEEEEEEETTTTEEEEEECCC--CCCCHHHHHHHHHHHHHHH
T ss_pred             EEEEEEecC-ccHHHHHHHHHHhCCCCCceeEecCCCCceEEEEEECCCCeEEEEecCC--CcCCHHHHHHHHHHHHhhc
Confidence            999999995 589999999998776554433 234589999999887666654 33444  334444332      2568


Q ss_pred             CCccEEEEEecc---ccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecC-HHHHHhhhC
Q 026265          169 KGSKWLVLRFGM---FNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFAN-EDEAAELVR  241 (241)
Q Consensus       169 ~~~~~v~~~~~~---~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N-~~Ea~~l~g  241 (241)
                      .+++++++++.+   .+.+.+.++++.+++.++++++|+++..     ...+++...  ..++++|| ++|++.|+|
T Consensus       133 ~~~~~v~~sGs~~~~~~~~~~~~l~~~a~~~~~~v~~D~s~~~-----~~~~~~~~~--~~~~ikpn~~~e~~~l~g  202 (319)
T d2ajra1         133 SKVDCVVISGSIPPGVNEGICNELVRLARERGVFVFVEQTPRL-----LERIYEGPE--FPNVVKPDLRGNHASFLG  202 (319)
T ss_dssp             TTCSEEEEESCCCTTSCTTHHHHHHHHHHHTTCEEEEECCHHH-----HHHHHHSSC--CCSEECCCCTTCCSCBTT
T ss_pred             ccccEEEEecCCcccccHHHHHHHHHHHHhcCCcccccchhhH-----HHHHhhhcc--cCcEEeeccHHHHHHHHh
Confidence            999999998432   3457888999999999999999997642     233444444  78999998 456666543

>d2f02a1 c.72.1.1 (A:1-313) Tagatose-6-phosphate kinase LacC {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Ribokinase-like
domain: Tagatose-6-phosphate kinase LacC
species: Enterococcus faecalis [TaxId: 1351]

Probab=99.86  E-value=4.4e-21  Score=160.00  Aligned_cols=185  Identities=17%  Similarity=0.191  Sum_probs=141.0

Q ss_pred             eEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCCc
Q 026265           17 LILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVP   96 (241)
Q Consensus        17 ~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~~   96 (241)
                      ++++++.||+||+++.+     ++++  .|....+                    .+...++||+++|+|++++ +||.+
T Consensus         1 ~~~~~~~np~vD~~~~v-----d~~~--~g~~~~~--------------------~~~~~~~GG~~~NvA~~l~-~lG~~   52 (313)
T d2f02a1           1 LIVTVTMNPSIDISYLL-----DHLK--LDTVNRT--------------------SQVTKTPGGKGLNVTRVIH-DLGGD   52 (313)
T ss_dssp             CEEEEESSCEEEEEEEC-----SCCC--TTSEEEE--------------------SCEEEEEESHHHHHHHHHH-HHTCC
T ss_pred             CEEEEeCChHHcEEEEe-----CCcc--CCCEEEe--------------------CeeeecCCCHHHHHHHHHH-HCCCC
Confidence            36777779999999999     4552  3433221                    3788999999999999999 89999


Q ss_pred             eeEEeeecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEEEcCCCCeeeeeCccccCCCCcccCC------hhhhCC
Q 026265           97 CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELI------AEDVKG  170 (241)
Q Consensus        97 ~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~------~~~i~~  170 (241)
                      +.++|.+|+| +|+.+++.|++.||++.++...+ .|+.++++++. +.++.+...+  ..+++++++      .+.+.+
T Consensus        53 ~~~~~~vGdd-~~~~i~~~l~~~gi~~~~i~~~~-~t~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~  127 (313)
T d2f02a1          53 VIATGVLGGF-HGAFIANELKKANIPQAFTSIKE-ETRDSIAILHE-GNQTEILEAG--PTVSPEEISNFLENFDQLIKQ  127 (313)
T ss_dssp             EEEEEEEEHH-HHHHHHHHHHHTTCCBCCEEESS-CCEEEEEEEET-TEEEEEEECC--CBCCHHHHHHHHHHHHHHHTT
T ss_pred             EEEEEEecCc-cHHHHHHHHHhhccCceEEEeec-CCceEEEEEeC-CCceEEeecc--ccCCHHHHHHHHHHhhhhhcc
Confidence            9999999955 78999999999999999887654 68888888874 4555444333  345554443      246899


Q ss_pred             ccEEEEEecc---ccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          171 SKWLVLRFGM---FNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       171 ~~~v~~~~~~---~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      +++++++..+   ...+.+.++++.+++.++++++|++...    + ....+...  .+|++++|+.|+..|+|
T Consensus       128 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~--~~~~l~~n~~E~~~l~g  194 (313)
T d2f02a1         128 AEIVTISGSLAKGLPSDFYQELVQKAHAQEVKVLLDTSGDS----L-RQVLQGPW--KPYLIKPNLEELEGLLG  194 (313)
T ss_dssp             CSEEEEESCCCBTSCTTHHHHHHHHHHHTTCEEEEECCTHH----H-HHHHHSSC--CCSEECCBHHHHHHHHT
T ss_pred             cceEEEecccccccCHHHHHHHHHHHHhcCCceeecchHHH----H-HHHhhhcc--cceEEEehhhhHHHhhc
Confidence            9999999322   2357788899999999999999997652    2 22334444  89999999999998875

>d1v19a_ c.72.1.1 (A:) 2-keto-3-deoxygluconate kinase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Ribokinase-like
domain: 2-keto-3-deoxygluconate kinase
species: Thermus thermophilus [TaxId: 274]

Probab=99.86  E-value=5.1e-21  Score=158.16  Aligned_cols=190  Identities=23%  Similarity=0.284  Sum_probs=147.2

Q ss_pred             CeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCC
Q 026265           16 ALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGV   95 (241)
Q Consensus        16 ~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~   95 (241)
                      .+|+++| .++||++...+.           ..                    ........++||+++|+|.+++ +||.
T Consensus         2 ~~i~viG-~~~vD~~~~~~~-----------~~--------------------~~~~~~~~~~GG~~~Nva~~l~-~lg~   48 (302)
T d1v19a_           2 LEVVTAG-EPLVALVPQEPG-----------HL--------------------RGKRLLEVYVGGAEVNVAVALA-RLGV   48 (302)
T ss_dssp             CSEEEES-CCEEEEEESSSS-----------CG--------------------GGCSEEEEEEECHHHHHHHHHH-HTTC
T ss_pred             CeEEEEC-cceEEEecCCCC-----------ce--------------------eecceEEEecCcHHHHHHHHHH-HcCC
Confidence            4799999 999998764421           00                    0113677899999999999999 8999


Q ss_pred             ceeEEeeecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEEEcCCCCeeeeeCc--cccCCCCcccCChhhhCCccE
Q 026265           96 PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCL--SNAVKIQADELIAEDVKGSKW  173 (241)
Q Consensus        96 ~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~~~~g~r~~~~~~--g~~~~l~~~~~~~~~i~~~~~  173 (241)
                      ++.++|.+|+|.+|+.+++.|++.||++.++...+..++.+++.++++|++++....  .....++.++.....++++++
T Consensus        49 ~v~~~~~iG~D~~g~~i~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  128 (302)
T d1v19a_          49 KVGFVGRVGEDELGAMVEERLRAEGVDLTHFRRAPGFTGLYLREYLPLGQGRVFYYRKGSAGSALAPGAFDPDYLEGVRF  128 (302)
T ss_dssp             CEEEEEEEESSHHHHHHHHHHHHHTCBCTTEEEESSCCCEEEEEECTTSCEEEEEECTTCSGGGCCTTSSCGGGGTTCSE
T ss_pred             CEEEEEEEcCCcccccchhhhhhcccccchhccccccccccchhhccccccccccccccccchhhccccccHHHHhcccE
Confidence            999999999999999999999999999999888877788888888888888876532  334456666677778999999


Q ss_pred             EEEE-ecc--c--cHHHHHHHHHHHHHCCCeEEEeCCchHHH---hhchhhHHhhhcCCCccEEecCHHHHHhhh
Q 026265          174 LVLR-FGM--F--NFEVIQAAIRIAKQEGLSVSMDLASFEMV---RNFRTPLLQLLESGDVDLCFANEDEAAELV  240 (241)
Q Consensus       174 v~~~-~~~--~--~~~~~~~~~~~a~~~g~~i~~D~~~~~~~---~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~  240 (241)
                      ++++ +..  .  ..+.+..+++..++.++.+.+|++.....   ..+.+.+...++  ++|++++|++|++.+.
T Consensus       129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~--~~d~~~~~~~e~~~~~  201 (302)
T d1v19a_         129 LHLSGITPALSPEARAFSLWAMEEAKRRGVRVSLDVNYRQTLWSPEEARGFLERALP--GVDLLFLSEEEAELLF  201 (302)
T ss_dssp             EEEETHHHHHCHHHHHHHHHHHHHHHTTTCEEEEECCCCTTTCCHHHHHHHHHHHGG--GCSEEEEEHHHHHHHH
T ss_pred             EeeeccccccchhHHHHHHHHHHHHHhcCCccccccchhhhccchhhhHHHHHhhhh--hccchhhhhhhhhhhh
Confidence            9999 321  1  13567788899999999999999654211   122333555666  8999999999987664

>d1rkda_ c.72.1.1 (A:) Ribokinase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Ribokinase-like
domain: Ribokinase
species: Escherichia coli [TaxId: 562]

Probab=99.85  E-value=1.3e-20  Score=155.07  Aligned_cols=189  Identities=21%  Similarity=0.310  Sum_probs=140.1

Q ss_pred             CeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCC
Q 026265           16 ALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGV   95 (241)
Q Consensus        16 ~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~   95 (241)
                      .+|+++| +.++|+++++     +++|.+ |...                    ...+....+||+++|+|++|+ +||.
T Consensus         2 ~~IlviG-~~~~D~~~~v-----~~~p~~-g~~~--------------------~~~~~~~~~GG~~~NvA~~l~-~lG~   53 (306)
T d1rkda_           2 GSLVVLG-SINADHILNL-----QSFPTP-GETV--------------------TGNHYQVAFGGKGANQAVAAG-RSGA   53 (306)
T ss_dssp             CEEEEEC-CCEEEEEEEC-----SSCCCT-TCCC--------------------CCCCEEEEEECHHHHHHHHHH-HHTC
T ss_pred             CEEEEEc-eeeEEEEEee-----CCCCCC-CceE--------------------eeceEEEecCCHHHHHHHHHH-HcCC
Confidence            5799999 9999999999     678754 3221                    124788999999999999999 8999


Q ss_pred             ceeEEeeecCChhHHHHHHHHHhCCceeeceeecCC-CceeEEEEEcCCCCeeeeeCccccCCCCcccCC--hhhhCCcc
Q 026265           96 PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNAVKIQADELI--AEDVKGSK  172 (241)
Q Consensus        96 ~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~-~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~--~~~i~~~~  172 (241)
                      ++.++|.+|+|.+|+.+++.|+++|+++.++..... .|+.+..+++.++.|......+...........  ........
T Consensus        54 ~v~~~~~vG~d~~~~~~~~~l~~~gi~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  133 (306)
T d1rkda_          54 NIAFIACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFVNGEGENVIGIHAGANAALSPALVEAQRERIANAS  133 (306)
T ss_dssp             EEEEEEEEESSTTHHHHHHHHHTTTEECTTEEEETTCCCEEEEEEECTTSCEEEEEECGGGGGCCHHHHHTTHHHHHHCS
T ss_pred             CEEEEEEECCccccchhhhccccccccccccccccccccccceeeEeecCcceeeeeccchhhhhhhhhhhhHhhhhhhe
Confidence            999999999999999999999999999999887765 788888888888888877666554444433221  22222233


Q ss_pred             EEEEEeccccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          173 WLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       173 ~v~~~~~~~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      .+..... ...+..........+.+.....++..      .++.+..++.  ++|++++|.+|+..++|
T Consensus       134 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~--~~d~~~~n~~E~~~l~~  193 (306)
T d1rkda_         134 ALLMQLE-SPLESVMAAAKIAHQNKTIVALNPAP------ARELPDELLA--LVDIITPNETEAEKLTG  193 (306)
T ss_dssp             EEEECSS-SCHHHHHHHHHHHHHTTCEEEECCCS------CCCCCHHHHT--TCSEECCCHHHHHHHHS
T ss_pred             eeeeccc-chhhhhhhHHHHhhhcccccccCchh------hhhhHHHHHh--hcccccCCHHHHHHHhC
Confidence            3333321 24566666666677777777777653      2333445565  99999999999998865

>d2fv7a1 c.72.1.1 (A:15-322) Ribokinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Ribokinase-like
domain: Ribokinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=1.9e-20  Score=154.56  Aligned_cols=188  Identities=16%  Similarity=0.231  Sum_probs=140.8

Q ss_pred             CeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCC
Q 026265           16 ALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGV   95 (241)
Q Consensus        16 ~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~   95 (241)
                      ..|++|| .+++|+++.+     +++|.+..  ++                   ...+....+||+++|+|++|+ +||.
T Consensus         2 ~~i~viG-~~~iD~~~~~-----~~~p~~g~--~~-------------------~~~~~~~~~GG~~~Nva~~l~-~lg~   53 (308)
T d2fv7a1           2 AAVVVVG-SCMTDLVSLT-----SRLPKTGE--TI-------------------HGHKFFIGFGGKGANQCVQAA-RLGA   53 (308)
T ss_dssp             CSEEEEC-CCEEEEEEEC-----SSCCCTTC--CC-------------------CCSEEEEEEECHHHHHHHHHH-HTTC
T ss_pred             CEEEEEC-hhheEeEeec-----CCCCCCCc--eE-------------------eeceEEEecCCHHHHHHHHHH-HCCC
Confidence            4699999 9999999998     67775422  11                   123578899999999999999 8999


Q ss_pred             ceeEEeeecCChhHHHHHHHHHhCCceeeceeecCC-CceeEEEEEcCCCCeeeeeCccccCCCCcccCC--hhhhCCcc
Q 026265           96 PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNAVKIQADELI--AEDVKGSK  172 (241)
Q Consensus        96 ~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~-~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~--~~~i~~~~  172 (241)
                      +|.++|.+|+|.+|+.+.+.|++.||++.++...+. +|..++++++.+++|++..+.+....+....+.  ........
T Consensus        54 ~v~~is~vG~D~~g~~i~~~L~~~gi~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  133 (308)
T d2fv7a1          54 MTSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTASIIVNNEGQNIIVIVAGANLLLNTEDLRAAANVISRAK  133 (308)
T ss_dssp             CEEEEEEEESSHHHHHHHHHHHTTTEECTTEEEESSSCCEEEEEEECTTSCEEEEEECGGGGGCCHHHHHHTHHHHHHCS
T ss_pred             CEEEEEEeccccccccccchhcccccccccccccccccccceEEEEecCCceEEEeeecchhhhchhhhhhhhhhcccce
Confidence            999999999999999999999999999999887765 778888888888999988776655555544332  22333344


Q ss_pred             EEEEEeccccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhh
Q 026265          173 WLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAEL  239 (241)
Q Consensus       173 ~v~~~~~~~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l  239 (241)
                      +..+... .+++......+.+++.+.++++|+.+..  ..+......     ..+++..|..|.+..
T Consensus       134 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-----~~~~~~~~~~e~~~~  192 (308)
T d2fv7a1         134 VMVCQLE-ITPATSLEALTMARRSGVKTLFNPAPAI--ADLDPQFYT-----LSDVFCCNESEAEIL  192 (308)
T ss_dssp             EEEECSS-SCHHHHHHHHHHHHHTTCEEEECCCSCC--TTCCTHHHH-----TCSEEEEEHHHHHHH
T ss_pred             EEeeccc-cchHHHHHHHHHhhhcCceEEecccchh--hhhhhhHHh-----hhhhhhhhHHHHHHh
Confidence            4444432 3577788888999999999999997542  122233333     667888888776643

>d2abqa1 c.72.1.1 (A:1-306) Fructose 1-phosphate kinase FruB {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Ribokinase-like
domain: Fructose 1-phosphate kinase FruB
species: Bacillus halodurans [TaxId: 86665]

Probab=99.83  E-value=7.5e-20  Score=151.80  Aligned_cols=182  Identities=20%  Similarity=0.236  Sum_probs=134.9

Q ss_pred             eEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCCc
Q 026265           17 LILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVP   96 (241)
Q Consensus        17 ~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~~   96 (241)
                      +|+.+++||+||+++.+     ++++  +|....                    +.+....+||+++|+|++++ +||.+
T Consensus         1 ~~~~~~~np~iD~~~~v-----~~~~--~g~~~~--------------------~~~~~~~~GG~~~N~A~~l~-~lG~~   52 (306)
T d2abqa1           1 MIYTVTLNPSIDYIVQV-----ENFQ--QGVVNR--------------------SERDRKQPGGKGINVSRVLK-RLGHE   52 (306)
T ss_dssp             CEEEEESSCEEEEEEEC-----TTCC--SSSEEE--------------------CSEEEEEEECHHHHHHHHHH-HTTCC
T ss_pred             CEEEEeCchhHeEEEEe-----CCcC--CCCeEE--------------------cCeeeecCCCHHHHHHHHHH-HcCCC
Confidence            36677779999999999     4564  454332                    13678899999999999999 89999


Q ss_pred             eeEEeeecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEEEcCCCCeeeeeCccccCCCCcccCC-----hhhhCCc
Q 026265           97 CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELI-----AEDVKGS  171 (241)
Q Consensus        97 ~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~-----~~~i~~~  171 (241)
                      +.++|.+|+| .|+.+++.|++.||+++++... +.|..++.+.+.  ++..+.  +.....+.+++.     ...+..+
T Consensus        53 ~~~ig~vG~D-~g~~i~~~L~~~gi~~~~v~~~-~~t~~~i~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  126 (306)
T d2abqa1          53 TKALGFLGGF-TGAYVRNALEKEEIGLSFIEVE-GDTRINVKIKGK--QETELN--GTAPLIKKEHVQALLEQLTELEKG  126 (306)
T ss_dssp             CEEEEEEEHH-HHHHHHHHHHHTTCEECCEEES-SCCEEEEEEESS--SCEEEB--CCCCCCCHHHHHHHHHHHTTCCTT
T ss_pred             EEEEEEecCc-cHHHHHHHHHhcccccccceee-eeeEEEEEEecc--cccccc--cccccCCHHHhhhhhhhHhhhccC
Confidence            9999999998 6999999999999999998875 467777666542  233332  222334443332     2457789


Q ss_pred             cEEEEEecc---ccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          172 KWLVLRFGM---FNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       172 ~~v~~~~~~---~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      ++++++...   ...+.+..+++.+++.+.++++|++...    +.+   ....  .+|++++|+.|+..++|
T Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~d~~~~~----~~~---~~~~--~~~~l~~n~~E~~~~~~  190 (306)
T d2abqa1         127 DVLVLAGSVPQAMPQTIYRSMTQIAKERGAFVAVDTSGEA----LHE---VLAA--KPSFIKPNHHELSELVS  190 (306)
T ss_dssp             CEEEEESCCCTTSCTTHHHHHHHHHHTTTCEEEEECCHHH----HHH---HGGG--CCSEECCBHHHHHHHHT
T ss_pred             CEEEEcCccccchHHHHHHHHHHHHHHcCCceeccchhhH----HHH---Hhhh--cceeecccccccccccc
Confidence            999998322   1246778888999999999999997542    222   2333  89999999999988764

>d2dcna1 c.72.1.1 (A:2-309) Hypothetical fructokinase ST2478 {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Ribokinase-like
domain: Hypothetical fructokinase ST2478
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=99.81  E-value=1.7e-19  Score=148.98  Aligned_cols=192  Identities=20%  Similarity=0.193  Sum_probs=134.3

Q ss_pred             CeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCC
Q 026265           16 ALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGV   95 (241)
Q Consensus        16 ~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~   95 (241)
                      .+|++|| .+++|++...+..           ..                    .......++||+++|+|.+|+ +||.
T Consensus         1 ~ki~~iG-~~~~D~~~~~~~~-----------~~--------------------~~~~~~~~~GG~~~Nva~~l~-~lG~   47 (308)
T d2dcna1           1 AKLITLG-EILIEFNALSPGP-----------LR--------------------HVSYFEKHVAGSEANYCVAFI-KQGN   47 (308)
T ss_dssp             CEEEEES-CCEEEEEESSSSC-----------GG--------------------GCCEEEEEEECHHHHHHHHHH-HTTC
T ss_pred             CEEEEEC-cceEEEecCCCCc-----------ee--------------------ecceeEEecCcHHHHHHHHHH-HCCC
Confidence            3799999 9999987644211           00                    113678899999999999999 8999


Q ss_pred             ceeEEeeecCChhHHHHHHHHHhCCceeeceeecCC-CceeEEEEEcC---CCCe-eeeeCccccCCCCcccCChhhhCC
Q 026265           96 PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDA---SGNR-TMRPCLSNAVKIQADELIAEDVKG  170 (241)
Q Consensus        96 ~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~-~T~~~~~~~~~---~g~r-~~~~~~g~~~~l~~~~~~~~~i~~  170 (241)
                      ++.|+|.+|+|.+|+++++.|++.||+++++...++ +|+++++..+.   .+.+ ++....++.......+.....+..
T Consensus        48 ~~~~i~~vG~D~~g~~i~~~L~~~gI~~~~i~~~~~~~t~~~~i~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~  127 (308)
T d2dcna1          48 ECGIIAKVGDDEFGYNAIEWLRGQGVDVSHMKIDPSAPTGIFFIQRHYPVPLKSESIYYRKGSAGSKLSPEDVDEEYVKS  127 (308)
T ss_dssp             EEEEECEEESSHHHHHHHHHHHHTTCBCTTCEEETTSCCCEEEEEESCSSTTCEEEEEECTTCTGGGCCGGGCCHHHHTT
T ss_pred             CEEEEEEeCCcccccccccccccccccccceeeeecccceEEEEEeccccccccccceeeeccccccccccccccccccc
Confidence            999999999999999999999999999999887766 89998887542   2333 333445666677777888888999


Q ss_pred             ccEEEEE-eccccHHHHHHHHHHHHHCCCeEEEeCCchHH---HhhchhhHHhhhcCCCccEEecCHHHHHhhh
Q 026265          171 SKWLVLR-FGMFNFEVIQAAIRIAKQEGLSVSMDLASFEM---VRNFRTPLLQLLESGDVDLCFANEDEAAELV  240 (241)
Q Consensus       171 ~~~v~~~-~~~~~~~~~~~~~~~a~~~g~~i~~D~~~~~~---~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~  240 (241)
                      +++++.+ +.....+.....+..+.+.+....+|.+....   .......+.+.+.....+++++|++|+..+.
T Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (308)
T d2dcna1         128 ADLVHSSGITLAISSTAKEAVYKAFEIASNRSFDTNIRLKLWSAEEAKREILKLLSKFHLKFLITDTDDSKIIL  201 (308)
T ss_dssp             CSEEEEEHHHHHSCHHHHHHHHHHHHHCSSEEEECCCCTTTSCHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHH
T ss_pred             ceEEEeeccccccccchhHHHHHHHhhccccccccceeccccchhhhhhhhhhhccccccccccchhhhhhhhc
Confidence            9999999 32211223333444455556666777653210   1112223333333236788999999987764

>d1tyya_ c.72.1.1 (A:) Aminoimidazole riboside kinase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Ribokinase-like
domain: Aminoimidazole riboside kinase
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.80  E-value=2.9e-19  Score=147.10  Aligned_cols=151  Identities=22%  Similarity=0.362  Sum_probs=114.8

Q ss_pred             eEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCCc
Q 026265           17 LILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVP   96 (241)
Q Consensus        17 ~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~~   96 (241)
                      +|++|| .+++|++....                                     ..+...+||++.|+|.+++ +||.+
T Consensus         2 ki~viG-~~~~D~i~~~~-------------------------------------~~~~~~~GG~~~NvA~~l~-~lG~~   42 (304)
T d1tyya_           2 KVWVIG-DASVDLVPEKQ-------------------------------------NSYLKCPGGASANVGVCVA-RLGGE   42 (304)
T ss_dssp             CEEEES-CCEEEEEECSS-------------------------------------SEEEEEEECHHHHHHHHHH-HTTCC
T ss_pred             eEEEEC-ccEEEEecCCC-------------------------------------CeEEEccCcHHHHHHHHHH-HcCCC
Confidence            699999 99999875441                                     1356789999999999999 89999


Q ss_pred             eeEEeeecCChhHHHHHHHHHhCCceeeceeecCC-CceeEEEEEcCCCCeeeeeCcccc--CCCCcccCChhhhCCccE
Q 026265           97 CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNA--VKIQADELIAEDVKGSKW  173 (241)
Q Consensus        97 ~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~-~T~~~~~~~~~~g~r~~~~~~g~~--~~l~~~~~~~~~i~~~~~  173 (241)
                      +.++|.+|+|.+|+.+++.|++.||++.++...+. .|+.+++..+.+|++++....+..  ..+++.+.  ..+...++
T Consensus        43 v~~v~~vG~D~~g~~i~~~L~~~gi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  120 (304)
T d1tyya_          43 CGFIGCLGDDDAGRFLRQVFQDNGVDVTFLRLDADLTSAVLIVNLTADGERSFTYLVHPGADTYVSPQDL--PPFRQYEW  120 (304)
T ss_dssp             EEEEEEECSSHHHHHHHHHHHTTTEECTTEEECTTSCCCEEEEC-------CEEECCSSCGGGGCCGGGC--CCCCTTCE
T ss_pred             EEEEEEecCChHHHHHHHhhhccccccccccccccccccceeeEeecccccccceecccccccccchhhh--hhhccceE
Confidence            99999999999999999999999999999988766 677887777778888877665433  23343333  34667889


Q ss_pred             EEEE-eccc---cHHHHHHHHHHHHHCCCeEEEeCCchH
Q 026265          174 LVLR-FGMF---NFEVIQAAIRIAKQEGLSVSMDLASFE  208 (241)
Q Consensus       174 v~~~-~~~~---~~~~~~~~~~~a~~~g~~i~~D~~~~~  208 (241)
                      +|+. +.+.   +.+...++++.+++.++++++|++...
T Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~  159 (304)
T d1tyya_         121 FYFSSIGLTDRPAREACLEGARRMREAGGYVLFDVNLRS  159 (304)
T ss_dssp             EEEEHHHHSSHHHHHHHHHHHHHHHHTTCEEEEECCCCG
T ss_pred             EEEecccccccchHHHHHHHHHHhhhcCceEeecccccc
Confidence            9998 3322   356677889999999999999997543

>d1vk4a_ c.72.1.1 (A:) Hypothetical protein TM0415 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Ribokinase-like
domain: Hypothetical protein TM0415
species: Thermotoga maritima [TaxId: 2336]

Probab=99.70  E-value=1.3e-17  Score=136.44  Aligned_cols=176  Identities=17%  Similarity=0.055  Sum_probs=123.1

Q ss_pred             CeEEEecCCeeeEEEeecCHhHHhhCCCCCCCceeeCHHHHHHhHhhccccCCCCCCCceeecCChHHHHHHHHHhhcCC
Q 026265           16 ALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGV   95 (241)
Q Consensus        16 ~~v~~iG~~~~vD~~~~~~~~~l~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~~LG~   95 (241)
                      .+|.++| +.++|++...+                                      .....+||+++|+|++++ +||.
T Consensus         7 ~~i~~vg-~~~~d~~~~~~--------------------------------------~~~~~~GG~~~n~a~~~~-~lG~   46 (288)
T d1vk4a_           7 HMITFIG-HVSKDVNVVDG--------------------------------------KREIAYGGGVVMGAITSS-LLGV   46 (288)
T ss_dssp             SEEEEEC-CCEEEEEEETT--------------------------------------EEEEEEECHHHHHHHHHH-HTTC
T ss_pred             ceEEEEC-CceeeEEecCC--------------------------------------cEEEecCCHHHHHHHHHH-HcCC
Confidence            5799999 99999877762                                      345789999999999999 8999


Q ss_pred             ceeEEeeecCChhHHHHHHHHHhCCceeeceeecCCCceeEEEEEcCCCCeeeeeCccccCCCCcccCChhhhCCccEEE
Q 026265           96 PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLV  175 (241)
Q Consensus        96 ~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~~~~T~~~~~~~~~~g~r~~~~~~g~~~~l~~~~~~~~~i~~~~~v~  175 (241)
                      ++.++|.+|+|..|.  .+.|+++||++.++... .+|.++.++.+..+.|.+..... ...++.+++.   ..++++++
T Consensus        47 ~~~~i~~vG~D~~~~--~~~l~~~gi~~~~i~~~-~~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~  119 (288)
T d1vk4a_          47 KTKVITKCTREDVSK--FSFLRDNGVEVVFLKSP-RTTSIENRYGSDPDTRESFLISA-ADPFTESDLA---FIEGEAVH  119 (288)
T ss_dssp             EEEEEEEECTTTGGG--GTTTGGGTCEEEEEECS-SCEEEEEEC-----CCEEEEEEC-CCCCCGGGGG---GCCSSEEE
T ss_pred             CEEEEEEeCCChHHH--HHHHHHcCCcEEeeccC-CcceEEEEEecCCCeeEEEeehh-hhcCChhhhh---hhccceEE
Confidence            999999999999885  48899999999987643 45666666665444455444333 3445554443   23578888


Q ss_pred             EEeccccHHHHHHHHHHHHHCCCeEEEeCCchHH-------HhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          176 LRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEM-------VRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       176 ~~~~~~~~~~~~~~~~~a~~~g~~i~~D~~~~~~-------~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      +.... ..+...++++.+++.+.++++|+.....       .....+.+.++++  ++|++++|++|++.|++
T Consensus       120 ~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~--~~d~i~~N~~E~~~l~~  189 (288)
T d1vk4a_         120 INPLW-YGEFPEDLIPVLRRKVMFLSADAQGFVRVPENEKLVYRDWEMKEKYLK--YLDLFKVDSREAETLTG  189 (288)
T ss_dssp             ECCSS-TTSSCGGGHHHHHHHCSEEEEETHHHHEEEETTEEEECCCTTHHHHGG--GCSEEEEEHHHHHHHHS
T ss_pred             Echhh-hccchHHHHHHHHHhCcceeeccccccccccccccccccHHHHHHHHH--hCCcccCCHHHHHHHhh
Confidence            87321 2222344566777889999999853310       0011234556777  99999999999998864

>d1u2xa_ c.72.1.3 (A:) ADP-specific phosphofructokinase {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: ADP-specific Phosphofructokinase/Glucokinase
domain: ADP-specific phosphofructokinase
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=97.21  E-value=0.021  Score=47.79  Aligned_cols=158  Identities=15%  Similarity=0.168  Sum_probs=88.2

Q ss_pred             ceeecCChHHHHHHHHHhhcCCce-eEEeeecCChhHHHHHHHHHhCCce-------------------------eecee
Q 026265           74 IKTIAGGSVTNTIRGLSVGFGVPC-GLIGAYGDDQQGQLFVSNMQFSGVD-------------------------VSRLR  127 (241)
Q Consensus        74 ~~~~~GG~~~N~a~~la~~LG~~~-~~vg~vG~D~~g~~i~~~l~~~gvd-------------------------~~~~~  127 (241)
                      ...+.||.+.-.|-.++ ++|.+. ...++++.    +...+.|+ .++-                         ++.+.
T Consensus        90 ~~~r~GGnA~imAn~la-~~g~~~vi~~~p~~s----k~~~~lf~-~~i~~P~v~~g~~~~~~p~~a~~~~d~~~iHlIl  163 (450)
T d1u2xa_          90 EEERLGGQAGIIANTLA-GLKIRKVIAYTPFLP----KRLAELFK-KGVLYPVVENGELQFKPIQEAYREGDPLKINRIF  163 (450)
T ss_dssp             SEEEEESHHHHHHHHHH-HTTCSEEEEECSCCC----HHHHTTSC-TTEEEEEEETTEEEEEEGGGCCCTTCCCCEEEEE
T ss_pred             cccccCChHHHHHHHHH-hcCCceEEEeCCCCc----HHHHHhcc-cCccccccccCcccccCchhhcccCCccceEEEE
Confidence            35678999999999999 899864 44566653    44444443 2331                         11121


Q ss_pred             ecCCCceeE---EEEEcCCCCeeeeeCc-cccCCCCc-ccCCh---hhhCCccEEEEE-eccc--------cH----HHH
Q 026265          128 MKRGPTGQC---VCLVDASGNRTMRPCL-SNAVKIQA-DELIA---EDVKGSKWLVLR-FGMF--------NF----EVI  186 (241)
Q Consensus       128 ~~~~~T~~~---~~~~~~~g~r~~~~~~-g~~~~l~~-~~~~~---~~i~~~~~v~~~-~~~~--------~~----~~~  186 (241)
                      .-+....+.   .-++.+.-+|-++.+. ..+..+.. +++..   +.-.+.|.++++ +.++        ..    +.+
T Consensus       164 Ey~~G~~~g~~~~~~~aPraNRfI~s~D~~nn~~l~~~e~f~~~l~~~~~~~dl~vlSGlq~l~~~~~~~~~~~~~l~~~  243 (450)
T d1u2xa_         164 EFRKGLKFKLGDETIEIPNSGRFIVSARFESISRIETREDIKPFLGEIGKEVDGAIFSGYQGLRTKYSDGKDANYYLRRA  243 (450)
T ss_dssp             EECTTCEEEETTEEEECCSCEEEEEEECCGGGGCCSCCTTTGGGHHHHHHTCSEEEECCGGGCCSBCTTSCBHHHHHHHH
T ss_pred             EeCCCCeeecCCceEecCCCceEEEecCCcccccccchHHHHHHHHhcccCCCEEEEechhhhhccccCchhHHHHHHHH
Confidence            111112222   0233344445555443 23334432 33332   223468999999 4332        11    223


Q ss_pred             HHHHHHHHHCCCeEEEeCCchHHHhhchhhHH-hhhcCCCccEEecCHHHHHhhh
Q 026265          187 QAAIRIAKQEGLSVSMDLASFEMVRNFRTPLL-QLLESGDVDLCFANEDEAAELV  240 (241)
Q Consensus       187 ~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~-~~l~~~~~d~l~~N~~Ea~~l~  240 (241)
                      .+.+...++.+++|-|.+.+..- ..++..+. .+++  ++|-+=+|++|...|.
T Consensus       244 ~~~l~~~~~~~i~iHlElAs~~d-~~l~~~i~~~ilp--~vDSlGmNEqEL~~l~  295 (450)
T d1u2xa_         244 KEDIIEFKEKDVKIHVEFASVQD-RKLRKKIITNILP--FVDSVGIDEAEIAQIL  295 (450)
T ss_dssp             HHHHHHHHHTTCEEEEECCCCCC-HHHHHHHHHHHGG--GSSEEEEEHHHHHHHH
T ss_pred             HHHHHhCCCCCCeEEEEecccch-HHHHHHHHHHhcc--ccccCCCCHHHHHHHH
Confidence            34444456678999999865421 13444444 4777  9999999999987653

>d1gc5a_ c.72.1.3 (A:) ADP-dependent glucokinase {Archaeon Thermococcus litoralis [TaxId: 2265]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: ADP-specific Phosphofructokinase/Glucokinase
domain: ADP-dependent glucokinase
species: Archaeon Thermococcus litoralis [TaxId: 2265]

Probab=96.98  E-value=0.003  Score=53.35  Aligned_cols=158  Identities=14%  Similarity=0.096  Sum_probs=89.5

Q ss_pred             CceeecCChHHHHHHHHHhhcCC-ceeEEeeecCChhHHHHHHHHHhCCceeeceeec--------------CCCceeEE
Q 026265           73 PIKTIAGGSVTNTIRGLSVGFGV-PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMK--------------RGPTGQCV  137 (241)
Q Consensus        73 ~~~~~~GG~~~N~a~~la~~LG~-~~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~~~~--------------~~~T~~~~  137 (241)
                      ....+.||.+...|-.|+ ++|. ++..-++++.    +.-.+.|+...+-  .....              ++..-.-+
T Consensus       113 ~~~~rmGGnAgimAn~La-~l~~~~vi~~~p~~~----k~q~~lf~~~~i~--~P~v~~~~~~l~~p~e~~~~e~d~IHl  185 (467)
T d1gc5a_         113 WDELRIGGQAGIMANLLG-GVYRIPTIVHVPQNP----KLQAELFVDGPIY--VPVFEGNKLKLVHPKDAIAEEEELIHY  185 (467)
T ss_dssp             CSEEEEESHHHHHHHHHH-HTSCCCEEECCSCCC----HHHHTTSCSSSEE--EEEECSSCEEEECGGGSCCSCCCCEEE
T ss_pred             chhcccCCHHHHHHHHHH-hcCCceEEEecCcch----HHHHHHhcCCCcc--cceecCCceeecCchhhccCCCCceEE
Confidence            566889999999999999 8984 5555555554    3333333332221  11110              11122223


Q ss_pred             EEEcCCC-----------CeeeeeCccccCCCCc-ccCC---hhhhCCccEEEEE-ecccc------------HHHHHHH
Q 026265          138 CLVDASG-----------NRTMRPCLSNAVKIQA-DELI---AEDVKGSKWLVLR-FGMFN------------FEVIQAA  189 (241)
Q Consensus       138 ~~~~~~g-----------~r~~~~~~g~~~~l~~-~~~~---~~~i~~~~~v~~~-~~~~~------------~~~~~~~  189 (241)
                      |+-=+.|           +|-++.+...+..+.. +++.   .+...++|.+.++ +.++.            .+.+.+.
T Consensus       186 IlEY~~G~~wg~~~aPraNRfI~s~D~~N~~l~~~e~f~~~l~~~~~~~dl~vlSGlqml~~~~~~~~~~~~~l~~~~~~  265 (467)
T d1gc5a_         186 IYEFPRGFQVFDVQAPRENRFIANADDYNARVYMRREFREGFEEITRNVELAIISGLQVLKEYYPDGTTYKDVLDRVESH  265 (467)
T ss_dssp             EEEECSSCEETTEECSSCEEEEEECCSSTTTTCCCHHHHHSHHHHHTTCSEEEECCGGGCCSBCTTSCBHHHHHHHHHHH
T ss_pred             EEEeCCCCeecceecCCCCeEEEeCCCCCccCcccHHHHHHHHhhccCCCEEEEEchhhccccCCCchhHHHHHHHHHHH
Confidence            3222333           2333333333333322 2222   1233578999999 43321            2334445


Q ss_pred             HHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhh
Q 026265          190 IRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELV  240 (241)
Q Consensus       190 ~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~  240 (241)
                      +...++.++++-|.+.... .+.+++.+.++++  ++|-+=+|++|...|.
T Consensus       266 l~~l~~~~i~iH~ElAs~~-d~~l~~~i~~ilp--~vDSlGmNEqEL~~l~  313 (467)
T d1gc5a_         266 LNILNRYNVKSHFEFAYTA-NRRVREALVELLP--KFTSVGLNEVELASIM  313 (467)
T ss_dssp             HHHHHHTTCEEEEECCCCC-CHHHHHHHHHHGG--GCSEEEECHHHHHHHH
T ss_pred             HHhcCcCCCceEEEecchh-hHHHHHHHHHhcc--ccccCCCCHHHHHHHH
Confidence            5555677899999986432 1356677778888  9999999999987653

>d1ua4a_ c.72.1.3 (A:) ADP-dependent glucokinase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: ADP-specific Phosphofructokinase/Glucokinase
domain: ADP-dependent glucokinase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=96.67  E-value=0.01  Score=49.86  Aligned_cols=159  Identities=16%  Similarity=0.106  Sum_probs=88.6

Q ss_pred             CceeecCChHHHHHHHHHhhcCCc-eeEEeeecCChhHHHHHHHHHhCCceeece-----e-------ecCCCceeEEEE
Q 026265           73 PIKTIAGGSVTNTIRGLSVGFGVP-CGLIGAYGDDQQGQLFVSNMQFSGVDVSRL-----R-------MKRGPTGQCVCL  139 (241)
Q Consensus        73 ~~~~~~GG~~~N~a~~la~~LG~~-~~~vg~vG~D~~g~~i~~~l~~~gvd~~~~-----~-------~~~~~T~~~~~~  139 (241)
                      ....+.||.++-.|-.++ ++|.. +...++++..    .-.+.|....|-.--+     .       ..+++.-.-+|+
T Consensus       104 ~~~~r~GGnAgimAn~la-~l~~~~Vi~~~p~~sk----~qa~~f~~~~i~~P~~~~~~~~l~~p~e~~~~e~~~IHlIl  178 (454)
T d1ua4a_         104 WNELRMGGQAGIMANLLG-GVYGVPVIVHVPQLSR----LQANLFLDGPIYVPTLENGEVKLIHPKEFSGDEENCIHYIY  178 (454)
T ss_dssp             CSEEEEESHHHHHHHHHT-TTTCCCEEECCSCCCH----HHHTTSCSSSEEEEEEETTEEEEECGGGCSCCCCCCEEEEE
T ss_pred             cccEecCCHHHHHHHHHH-hcCCceEEEecCCchH----HHHHHhcCCCcccceeecCceeecCchhhcCCCCcceEEEE
Confidence            457789999999999999 89965 4444555542    2222222211110000     0       000111122222


Q ss_pred             EcCCC-----------CeeeeeCccccCCCCc-ccCCh---hhhCCccEEEEE-ecccc-------HHHHHHHHHHHHHC
Q 026265          140 VDASG-----------NRTMRPCLSNAVKIQA-DELIA---EDVKGSKWLVLR-FGMFN-------FEVIQAAIRIAKQE  196 (241)
Q Consensus       140 ~~~~g-----------~r~~~~~~g~~~~l~~-~~~~~---~~i~~~~~v~~~-~~~~~-------~~~~~~~~~~a~~~  196 (241)
                      -=+.|           +|-++.+...+..+.. +.+..   +...++|.+.++ +.++.       .+...+.+...++.
T Consensus       179 EY~~G~~wg~~~aPraNRfI~s~D~~N~~l~~~e~f~~~l~~~~~~~dl~vlSGlqmm~~~~~~~~~~~~~~~l~~~~~~  258 (454)
T d1ua4a_         179 EFPRGFRVFEFEAPRENRFIGSADDYNTTLFIREEFRESFSEVIKNVQLAILSGLQALTKENYKEPFEIVKSNLEVLNER  258 (454)
T ss_dssp             EECTTCEETTEECSSCEEEEEECCSSGGGTCCCGGGSTTHHHHGGGCSEEEECCGGGCCTTTCHHHHHHHHHHHHHHHHT
T ss_pred             EeCCCCeecceecCCCceEEEeCCCCCccCcccHHHHHHHHHhccCCCEEEEEccccccchhhHHHHHHHHHHHHhcCcc
Confidence            21233           3444444444444432 33332   223468999999 43321       23344445555677


Q ss_pred             CCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhh
Q 026265          197 GLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAEL  239 (241)
Q Consensus       197 g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l  239 (241)
                      +++|-|.+.... -..+++.+.++++  ++|-+=+|++|...|
T Consensus       259 ~i~IH~ElAs~~-d~~l~~~i~~vlp--~vDSlGmNEqEL~~l  298 (454)
T d1ua4a_         259 EIPVHLEFAFTP-DEKVREEILNVLG--MFYSVGLNEVELASI  298 (454)
T ss_dssp             TCCEEEECCCCC-CHHHHHHHHHHGG--GCSEEEECHHHHHHH
T ss_pred             CCceEEEecccc-HHHHHHHHHHhCC--cCCcCCCCHHHHHHH
Confidence            899999987432 1246777778888  999999999998765

>d1ekqa_ c.72.1.2 (A:) Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Thiamin biosynthesis kinases
domain: Hydroxyethylthiazole kinase (THZ kinase, ThiK)
species: Bacillus subtilis [TaxId: 1423]

Probab=96.60  E-value=0.0021  Score=50.52  Aligned_cols=75  Identities=24%  Similarity=0.251  Sum_probs=51.3

Q ss_pred             hhhCCccEEEEEecccc---HHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhh-HHhhhcCCCccEEecCHHHHHhhhC
Q 026265          166 EDVKGSKWLVLRFGMFN---FEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTP-LLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       166 ~~i~~~~~v~~~~~~~~---~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~-l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      +..+.++.++++.....   .+.+...++.+++.++++++||...... .+|.+ ..+++....+++|++|..|+..|.|
T Consensus        54 e~~~~a~alviN~Gtl~~~~~~~m~~a~~~a~~~~~PvVLDPVgvgas-~~R~~~~~~ll~~~~~tVI~gN~~Ei~~L~g  132 (269)
T d1ekqa_          54 DMAKIAGALVLNIGTLSKESVEAMIIAGKSANEHGVPVILDPVGAGAT-PFRTESARDIIREVRLAAIRGNAAEIAHTVG  132 (269)
T ss_dssp             HHHHHSSEEEEECTTCCHHHHHHHHHHHHHHHHTTCCEEEECTTBTTB-HHHHHHHHHHHHHSCCSEEEECHHHHHHHCC
T ss_pred             HHHHhccceEEecCCCCHHHHHHHHHHHHHHHHcCCCEEECCcCCCCc-hhHHHHHHHHHHhCCCceEcCCHHHHHHHhC
Confidence            46677899999943333   3556667788899999999998543211 23333 3344432267999999999999975

>d1l2la_ c.72.1.3 (A:) ADP-dependent glucokinase {Archaeon Thermococcus litoralis [TaxId: 2265]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: ADP-specific Phosphofructokinase/Glucokinase
domain: ADP-dependent glucokinase
species: Archaeon Thermococcus litoralis [TaxId: 2265]

Probab=96.24  E-value=0.073  Score=44.46  Aligned_cols=156  Identities=17%  Similarity=0.113  Sum_probs=87.1

Q ss_pred             CceeecCChHHHHHHHHHhhcCCceeEEe-eecCChhHHHHHHHHHhCCce------------------------eecee
Q 026265           73 PIKTIAGGSVTNTIRGLSVGFGVPCGLIG-AYGDDQQGQLFVSNMQFSGVD------------------------VSRLR  127 (241)
Q Consensus        73 ~~~~~~GG~~~N~a~~la~~LG~~~~~vg-~vG~D~~g~~i~~~l~~~gvd------------------------~~~~~  127 (241)
                      ....+.||.++-.|-.++ ++|....++. ++.    ++.-.+.|....|-                        ++.+.
T Consensus       102 ~~~~r~GGnAgimAn~La-~lg~~~Vi~~~p~l----sk~q~~~f~~~~i~~p~~~~~~~~l~~p~~~~~~e~d~IHlIl  176 (451)
T d1l2la_         102 WDELRMGGQVGIMANLLG-GVYGIPVIAHVPQL----SELQASLFLDGPIYVPTFERGELRLIHPREFRKGEEDCIHYIY  176 (451)
T ss_dssp             CSEEEEESHHHHHHHHHT-TTSCCCEEECCSSC----CHHHHHTSCSSSEEEEC------CEECGGGC----CCCEEECC
T ss_pred             ccccccCCHHHHHHHHHH-hcCCceEEEccCcc----hHHHHHHhcCCCcccccccCCceeecChhhccCCCCcceEEEE
Confidence            446789999999999999 8998654442 222    12222333222221                        11111


Q ss_pred             -ecCC-CceeEEEEEcCCCCeeeeeCccccCCCCc-ccCC---hhhhCCccEEEEE-eccc---c----HHHHHHHHHHH
Q 026265          128 -MKRG-PTGQCVCLVDASGNRTMRPCLSNAVKIQA-DELI---AEDVKGSKWLVLR-FGMF---N----FEVIQAAIRIA  193 (241)
Q Consensus       128 -~~~~-~T~~~~~~~~~~g~r~~~~~~g~~~~l~~-~~~~---~~~i~~~~~v~~~-~~~~---~----~~~~~~~~~~a  193 (241)
                       ...+ .-+.   ++.+.-+|-++.+...+..+.. +++.   .+...++|.++++ +.++   +    ...+.+.++..
T Consensus       177 EY~~G~~wg~---~~aPraNRfI~s~D~~N~~l~~~e~f~~~l~~~~~~pdl~vlSGlq~l~~~~~~~~~~~~~~~l~~~  253 (451)
T d1l2la_         177 EFPRNFKVLD---FEAPRENRFIGAADDYNPILYVREEWIERFEEIAKRSELAIISGLHPLTQENHGKPIKLVREHLKIL  253 (451)
T ss_dssp             EECTTCEETT---EECSSCEEEEEEECSSGGGTCCCHHHHHSHHHHHTTCSEEEEECCTTCCTTTCHHHHHHHHHHHHHH
T ss_pred             EcCCCCeecc---EEcCCCCeEEEEcCCCCccccccHHHHHHHHHhhcCCCEEEEecccccccccchHHHHHHHHHHHhc
Confidence             1111 1110   1223334544444333344432 2222   1233579999999 4332   1    23344455556


Q ss_pred             HHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhh
Q 026265          194 KQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAEL  239 (241)
Q Consensus       194 ~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l  239 (241)
                      +..++++-|.+.... -+.++..+.++++  ++|-+=+|++|...|
T Consensus       254 ~~~~i~iH~ElAs~~-d~~~~~~l~~vlp--~vdSlGmNEqEL~~l  296 (451)
T d1l2la_         254 NDLGIRAHLEFAFTP-DEVVRLEIVKLLK--HFYSVGLNEVELASV  296 (451)
T ss_dssp             HHTTCEEEEECCCCS-SHHHHHHHHHHGG--GCSEEEECHHHHHHH
T ss_pred             CCcCCcEEEEeccch-HHHHHHHHHHhcc--cCccCCcCHHHHHHH
Confidence            677999999986432 1356677778888  999999999998655

>d1v8aa_ c.72.1.2 (A:) Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Thiamin biosynthesis kinases
domain: Hydroxyethylthiazole kinase (THZ kinase, ThiK)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.09  E-value=0.0025  Score=49.99  Aligned_cols=74  Identities=24%  Similarity=0.328  Sum_probs=50.8

Q ss_pred             hhhCCccEEEEEecccc---HHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhh-HHhhhcCCCccEEecCHHHHHhhhC
Q 026265          166 EDVKGSKWLVLRFGMFN---FEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTP-LLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       166 ~~i~~~~~v~~~~~~~~---~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~-l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      +..+.++.++++....+   .+.+...++.+++.++++++||...... .+|.. ..+++.+ ++++|++|..|+..|+|
T Consensus        52 e~~~~a~al~iN~Gtl~~~~~~~m~~a~~~A~~~~~PvVLDPVgvgas-~~R~~~~~~ll~~-~~~vItgN~~Ei~~L~g  129 (264)
T d1v8aa_          52 EMIRLADAVVINIGTLDSGWRRSMVKATEIANELGKPIVLDPVGAGAT-KFRTRVSLEILSR-GVDVLKGNFGEISALLG  129 (264)
T ss_dssp             HHHHHCSEEEEECTTCCHHHHHHHHHHHHHHHHHTCCEEEECTTBTTB-HHHHHHHHHHHHH-CCSEEEEEHHHHHHHHH
T ss_pred             HHHHhcCceEeeCCCCCHHHHHHHHHHHHHHHHcCCCEEEcCcccCcc-hhHHHHHHHHhcc-CCcEEcCCHHHHHHHhC
Confidence            45677889999943333   3566777788899999999998533211 22222 3344443 78999999999999864

>d1lhpa_ c.72.1.5 (A:) Pyridoxal kinase {Sheep (Ovis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: PfkB-like kinase
domain: Pyridoxal kinase
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=95.17  E-value=0.02  Score=45.64  Aligned_cols=72  Identities=14%  Similarity=0.097  Sum_probs=46.1

Q ss_pred             hhCCccEEEEEeccccH---HHHHHHHHHHHH--CCCeEEEeCCch---------HHHhhchhhHHh-hhcCCCccEEec
Q 026265          167 DVKGSKWLVLRFGMFNF---EVIQAAIRIAKQ--EGLSVSMDLASF---------EMVRNFRTPLLQ-LLESGDVDLCFA  231 (241)
Q Consensus       167 ~i~~~~~v~~~~~~~~~---~~~~~~~~~a~~--~g~~i~~D~~~~---------~~~~~~~~~l~~-~l~~~~~d~l~~  231 (241)
                      .+.+.|.++++|.. +.   +.+.++++..+.  ....+++||--.         +..+...+.+.+ +++  .+|+++|
T Consensus        70 ~l~~~daI~tG~l~-s~~~i~~i~~~l~~~~~~~p~~~~v~DPVmgd~~~g~g~~~~~~~~~~~~~~~Llp--~adiITP  146 (309)
T d1lhpa_          70 HVNQYDYVLTGYTR-DKSFLAMVVDIVQELKQQNPRLVYVCDPVMGDQRNGEGAMYVPDDLLPVYREKVVP--VADIITP  146 (309)
T ss_dssp             TCCCCSEEEECCCC-CHHHHHHHHHHHHHHHHHCTTCEEEECCCCSSCCCSSSCSCCCGGGHHHHHHTTGG--GCSEECC
T ss_pred             cccccCeeeecccC-CHHHHHHHHHHHHHhhccCCCCcEEEeccccccccccccccCCHHHHHHHHHhhcC--cCcEEec
Confidence            34468899888532 33   345555555443  367889998421         111223344544 777  9999999


Q ss_pred             CHHHHHhhhC
Q 026265          232 NEDEAAELVR  241 (241)
Q Consensus       232 N~~Ea~~l~g  241 (241)
                      |..|++.|+|
T Consensus       147 N~~Ea~~Ltg  156 (309)
T d1lhpa_         147 NQFEAELLTG  156 (309)
T ss_dssp             CHHHHHHHHT
T ss_pred             cHHHHhHHhc
Confidence            9999999986

>d1vi9a_ c.72.1.5 (A:) Pyridoxamine kinase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: PfkB-like kinase
domain: Pyridoxamine kinase
species: Escherichia coli [TaxId: 562]

Probab=94.12  E-value=0.055  Score=42.47  Aligned_cols=70  Identities=14%  Similarity=-0.012  Sum_probs=44.3

Q ss_pred             CCccEEEEEeccccH---HHHHHHHHHHHHC--CCeEEEeCCchH------HHhhchhh-HHhhhcCCCccEEecCHHHH
Q 026265          169 KGSKWLVLRFGMFNF---EVIQAAIRIAKQE--GLSVSMDLASFE------MVRNFRTP-LLQLLESGDVDLCFANEDEA  236 (241)
Q Consensus       169 ~~~~~v~~~~~~~~~---~~~~~~~~~a~~~--g~~i~~D~~~~~------~~~~~~~~-l~~~l~~~~~d~l~~N~~Ea  236 (241)
                      .+.|.+.++|.. +.   +.+.++++..++.  +.++++||--..      ..+..... ..++++  ++|+++||..|+
T Consensus        74 ~~~daI~tG~l~-s~~~v~~i~~~l~~~k~~~p~~~~v~DPVm~d~~~~~~~~~~~~~~~~~~Llp--~adiitPN~~Ea  150 (288)
T d1vi9a_          74 HTCDAVLSGYLG-SAEQGEHILGIVRQVKAANPQAKYFCDPVMGHPEKGCIVAPGVAEFHVRHGLP--ASDIIAPNLVEL  150 (288)
T ss_dssp             GGCCEEEECCCS-CHHHHHHHHHHHHHHHHHCTTCEEEECCCCEETTTEECSCTTHHHHHHHTHHH--HCSEECCCHHHH
T ss_pred             ccCCEEEEeccC-ChHHHHHHHHHHHHHhhccCCccEEEcceeecCCCCcCCChHHHHHHHHHhcc--cCCEEecCHHHH
Confidence            357888888532 33   4556666665543  678999994210      00111122 244677  999999999999


Q ss_pred             HhhhC
Q 026265          237 AELVR  241 (241)
Q Consensus       237 ~~l~g  241 (241)
                      +.|+|
T Consensus       151 ~~L~g  155 (288)
T d1vi9a_         151 EILCE  155 (288)
T ss_dssp             HHHHT
T ss_pred             HHhhc
Confidence            99986

>d1ub0a_ c.72.1.2 (A:) 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Thiamin biosynthesis kinases
domain: 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD)
species: Thermus thermophilus [TaxId: 274]

Probab=91.96  E-value=0.21  Score=38.23  Aligned_cols=69  Identities=13%  Similarity=-0.030  Sum_probs=42.7

Q ss_pred             CccEEEEEeccccHHHHHHHHHHHHHC-CCeEEEeCCchHHH-------hhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          170 GSKWLVLRFGMFNFEVIQAAIRIAKQE-GLSVSMDLASFEMV-------RNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       170 ~~~~v~~~~~~~~~~~~~~~~~~a~~~-g~~i~~D~~~~~~~-------~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      +.|.+.+.+. .+.+....+.+..++. ..++++|+-.....       +.......++++  .+|+++||..|++.|+|
T Consensus        70 ~~daIkiG~l-~s~~~~~~i~~~l~~~~~~~~v~dpv~~~~~~~~~~~~~~~~~~~~~Llp--~adiiTPN~~Ea~~L~g  146 (258)
T d1ub0a_          70 PLHAAKTGAL-GDAAIVEAVAEAVRRFGVRPLVVDPVMVAKSGDPLLAKEAAAALKERLFP--LADLVTPNRLEAEALLG  146 (258)
T ss_dssp             CCSEEEECCC-CSHHHHHHHHHHHHHTTCCSEEECCCC---------CHHHHHHHHHHTGG--GCSEECCBHHHHHHHHC
T ss_pred             CccEEEEecc-ccchHHHHHHHHHHHhccccceEeeeeecccCccccchhHHHHHHHhhcc--cceeecCCHHHHhhhcC
Confidence            5788888853 2455554455544443 46788887422110       112222345777  99999999999999976

>d1jxha_ c.72.1.2 (A:) 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Thiamin biosynthesis kinases
domain: 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD)
species: Salmonella typhimurium [TaxId: 90371]

Probab=90.84  E-value=0.3  Score=37.53  Aligned_cols=69  Identities=19%  Similarity=0.154  Sum_probs=41.5

Q ss_pred             CccEEEEEeccccHHHHHHHHHHHHHC-CCeEEEeCCchHH------HhhchhhH-HhhhcCCCccEEecCHHHHHhhhC
Q 026265          170 GSKWLVLRFGMFNFEVIQAAIRIAKQE-GLSVSMDLASFEM------VRNFRTPL-LQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       170 ~~~~v~~~~~~~~~~~~~~~~~~a~~~-g~~i~~D~~~~~~------~~~~~~~l-~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      +.+.+.+.+. .+.+.+..+.+..++. ..++++||-....      .+...+.+ ..+++  .+|+++||..|+..|++
T Consensus        72 ~~~aIkiG~l-~s~~~i~~v~~~l~~~~~~~~vvdpv~~~~~~~~~~~~~~~~~~~~~Llp--~adviTPN~~Ea~~Ll~  148 (266)
T d1jxha_          72 RIDTTKIGML-AETDIVEAVAERLQRHHVRNVVLDTVMLAKSGDPLLSPSAIETLRVRLLP--QVSLITPNLPEAAALLD  148 (266)
T ss_dssp             CCSEEEECCC-CSHHHHHHHHHHHHHTTCCSEEEECCCC------CCCHHHHHHHHHHTGG--GCSEEECBHHHHHHHHT
T ss_pred             cCceEEEccc-chHHHHHHHHHHHHhccCCceEEeccccccccchhhHHHHHHHHHHHhhh--hhheecCCHHHHHHHhc
Confidence            5778888843 2555555555555544 4678888832110      01111222 34677  99999999999988754

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=85.99  E-value=3.8  Score=28.08  Aligned_cols=42  Identities=17%  Similarity=0.012  Sum_probs=33.4

Q ss_pred             ChhhhCCccEEEEEeccccHHHHHHHHHHHHHCCCe-EEEeCCchH
Q 026265          164 IAEDVKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLS-VSMDLASFE  208 (241)
Q Consensus       164 ~~~~i~~~~~v~~~~~~~~~~~~~~~~~~a~~~g~~-i~~D~~~~~  208 (241)
                      +.+.+++.|++++.   .|.+...++...+.+.|.+ +++|.|+.+
T Consensus        58 ~~~~~~~~DvvF~a---lp~~~s~~~~~~l~~~g~~~~VIDlSsdf  100 (147)
T d1mb4a1          58 DIESLKQLDAVITC---QGGSYTEKVYPALRQAGWKGYWIDAASTL  100 (147)
T ss_dssp             CHHHHTTCSEEEEC---SCHHHHHHHHHHHHHTTCCSEEEESSSTT
T ss_pred             chhhhccccEEEEe---cCchHHHHHhHHHHHcCCceEEEeCCccc
Confidence            44567899999998   4667778888888888875 799999765

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=85.71  E-value=0.86  Score=30.05  Aligned_cols=49  Identities=12%  Similarity=0.251  Sum_probs=37.9

Q ss_pred             eeecCCh--HHHHHHHHHhhcCCceeEEeeec------CChhHHHHHHHHHhCCceee
Q 026265           75 KTIAGGS--VTNTIRGLSVGFGVPCGLIGAYG------DDQQGQLFVSNMQFSGVDVS  124 (241)
Q Consensus        75 ~~~~GG~--~~N~a~~la~~LG~~~~~vg~vG------~D~~g~~i~~~l~~~gvd~~  124 (241)
                      -...||+  |.-.|..++ ++|.+++++-.-.      +....+.+.+.|++.||++.
T Consensus        25 v~IiGgG~iG~E~A~~l~-~~g~~Vtlv~~~~~il~~~d~~~~~~~~~~l~~~gV~i~   81 (117)
T d1onfa2          25 IGIVGSGYIAVELINVIK-RLGIDSYIFARGNRILRKFDESVINVLENDMKKNNINIV   81 (117)
T ss_dssp             EEEECCSHHHHHHHHHHH-TTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEE
T ss_pred             EEEECCchHHHHHHHHHH-hccccceeeehhccccccccHHHHHHHHHHHHhCCCEEE
Confidence            4455555  788899999 8999999987522      33467889999999999864

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=85.48  E-value=1.7  Score=28.51  Aligned_cols=51  Identities=12%  Similarity=0.090  Sum_probs=39.2

Q ss_pred             CceeecCCh--HHHHHHHHHhhcCCceeEEeeec------CChhHHHHHHHHHhCCceee
Q 026265           73 PIKTIAGGS--VTNTIRGLSVGFGVPCGLIGAYG------DDQQGQLFVSNMQFSGVDVS  124 (241)
Q Consensus        73 ~~~~~~GG~--~~N~a~~la~~LG~~~~~vg~vG------~D~~g~~i~~~l~~~gvd~~  124 (241)
                      ..-...||+  ++=.|..++ ++|.++.++-.-.      +...++.+.+.|++.||++.
T Consensus        23 ~~i~IiG~G~ig~E~A~~l~-~~G~~Vtiv~~~~~ll~~~d~ei~~~l~~~l~~~Gv~i~   81 (119)
T d3lada2          23 GKLGVIGAGVIGLELGSVWA-RLGAEVTVLEAMDKFLPAVDEQVAKEAQKILTKQGLKIL   81 (119)
T ss_dssp             SEEEEECCSHHHHHHHHHHH-HTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEE
T ss_pred             CeEEEECCChHHHHHHHHHH-HcCCceEEEEeecccCCcccchhHHHHHHHHHhcCceee
Confidence            445556665  456788898 8999999997544      34689999999999999764

>d1kyha_ c.72.1.4 (A:) Hypothetical protein YxkO {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: YjeF C-terminal domain-like
domain: Hypothetical protein YxkO
species: Bacillus subtilis [TaxId: 1423]

Probab=83.89  E-value=0.42  Score=36.97  Aligned_cols=66  Identities=12%  Similarity=0.069  Sum_probs=45.0

Q ss_pred             hCCccEEEEEeccccHHHHHHHHHHHHHCCCeEEEeCCchHHHhhchhhHHhhhcCCCccEEecCHHHHHhhhC
Q 026265          168 VKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR  241 (241)
Q Consensus       168 i~~~~~v~~~~~~~~~~~~~~~~~~a~~~g~~i~~D~~~~~~~~~~~~~l~~~l~~~~~d~l~~N~~Ea~~l~g  241 (241)
                      .+..+.+.+...+...+...++++...+.+.++++|...-      .........  ...+++||.-|+..|+|
T Consensus        92 ~~~~~~~~iGpGlg~~~~~~~~~~~l~~~~~p~VlDAdal------~~~~~~~~~--~~~IiTPH~gE~~rL~g  157 (275)
T d1kyha_          92 EETYRAIAIGPGLPQTESVQQAVDHVLTADCPVILDAGAL------AKRTYPKRE--GPVILTPHPGEFFRMTG  157 (275)
T ss_dssp             CSCCSEEEECTTCCSSHHHHHHHHHHTTSSSCEEECGGGC------CSCCCCCCS--SCEEECCCHHHHHHHHC
T ss_pred             hhccceEEEeccccchHHHHHHHHHHhhccCceeehhhhh------hhhhccccc--CceEecccHHHHHHhcC
Confidence            4578888888333233455667777777889999998643      111112223  67899999999999975

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=83.35  E-value=1.4  Score=29.11  Aligned_cols=51  Identities=18%  Similarity=0.126  Sum_probs=39.0

Q ss_pred             CceeecCC--hHHHHHHHHHhhcCCceeEEeeec------CChhHHHHHHHHHhCCceee
Q 026265           73 PIKTIAGG--SVTNTIRGLSVGFGVPCGLIGAYG------DDQQGQLFVSNMQFSGVDVS  124 (241)
Q Consensus        73 ~~~~~~GG--~~~N~a~~la~~LG~~~~~vg~vG------~D~~g~~i~~~l~~~gvd~~  124 (241)
                      +.....||  -|+-.|..++ +||.+++++-.-.      +...++.+.+.|++.||++.
T Consensus        24 ~~~vIiG~G~ig~E~A~~l~-~lG~~Vtii~~~~~~l~~~d~ei~~~l~~~l~~~GV~i~   82 (122)
T d1v59a2          24 KRLTIIGGGIIGLEMGSVYS-RLGSKVTVVEFQPQIGASMDGEVAKATQKFLKKQGLDFK   82 (122)
T ss_dssp             SEEEEECCSHHHHHHHHHHH-HTTCEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEE
T ss_pred             CeEEEECCCchHHHHHHHHH-hhCcceeEEEeccccchhhhhhhHHHHHHHHHhccceEE
Confidence            44555566  4778899999 8999999986422      33588999999999999875