Citrus Sinensis ID: 026305
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 240 | ||||||
| 73761685 | 319 | ACC oxidase 1 [Gossypium hirsutum] | 0.866 | 0.652 | 0.903 | 1e-107 | |
| 35187433 | 278 | 1-aminocyclopropane-1-carboxylic acid ox | 0.866 | 0.748 | 0.908 | 1e-107 | |
| 343794778 | 317 | ACC oxidase 6 [Actinidia chinensis] | 0.862 | 0.652 | 0.889 | 1e-104 | |
| 20152199 | 320 | 1-aminocyclopropane-1-carboxylate oxidas | 0.866 | 0.65 | 0.880 | 1e-104 | |
| 14211818 | 318 | ACC oxidase [Carica papaya] gi|42491583| | 0.866 | 0.654 | 0.875 | 1e-104 | |
| 4090533 | 318 | ACC oxidase [Carica papaya] gi|38141531| | 0.866 | 0.654 | 0.875 | 1e-104 | |
| 224113841 | 318 | 1-aminocyclopropane-1-carboxylate [Popul | 0.866 | 0.654 | 0.870 | 1e-104 | |
| 225447149 | 326 | PREDICTED: 1-aminocyclopropane-1-carboxy | 0.866 | 0.638 | 0.860 | 1e-104 | |
| 54606509 | 318 | 1-aminocyclopropane-1-carboxylate oxidas | 0.866 | 0.654 | 0.870 | 1e-104 | |
| 225447147 | 318 | PREDICTED: 1-aminocyclopropane-1-carboxy | 0.866 | 0.654 | 0.860 | 1e-104 |
| >gi|73761685|gb|AAZ83342.1| ACC oxidase 1 [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/208 (90%), Positives = 198/208 (95%)
Query: 33 QKAMKEFAVELEKVAEQLLELLCENLGLEEGYLKKVFYGSKGPTFGTKVSNYPPCPKPDL 92
+K MKEFAVELEK+AEQLL+LLCENLGLE GYLKKVFYGSKGPTFGTKVSNYPPCPKPDL
Sbjct: 112 RKVMKEFAVELEKLAEQLLDLLCENLGLEPGYLKKVFYGSKGPTFGTKVSNYPPCPKPDL 171
Query: 93 IKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYK 152
IKGLRAHTDAGGIILLFQDD+VSGLQLLKD QW+DVPPMKHSIVINLGDQLEVITNGKYK
Sbjct: 172 IKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMKHSIVINLGDQLEVITNGKYK 231
Query: 153 SVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMKLYAG 212
SV+HRVIAQT+G RMSIASFYNPGSDAVIYPAPAL+EKEA SQVYPKFVFEDYM LYA
Sbjct: 232 SVMHRVIAQTDGTRMSIASFYNPGSDAVIYPAPALLEKEADKSQVYPKFVFEDYMNLYAD 291
Query: 213 LKFQAKEPRFEAMKNMETIVNLGPIATV 240
LKFQAKEPRFEAMK +E+ VNLGPIATV
Sbjct: 292 LKFQAKEPRFEAMKTVESAVNLGPIATV 319
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|35187433|gb|AAQ84308.1| 1-aminocyclopropane-1-carboxylic acid oxidase [Gossypium barbadense] | Back alignment and taxonomy information |
|---|
| >gi|343794778|gb|AEM62885.1| ACC oxidase 6 [Actinidia chinensis] | Back alignment and taxonomy information |
|---|
| >gi|20152199|dbj|BAB89352.1| 1-aminocyclopropane-1-carboxylate oxidase [Diospyros kaki] | Back alignment and taxonomy information |
|---|
| >gi|14211818|gb|AAK57516.1| ACC oxidase [Carica papaya] gi|42491583|gb|AAS16933.1| 1-aminocyclopropane-1-carboxylate oxidase 1 [Carica papaya] gi|51243480|gb|AAT99444.1| ripening related ACC oxidase 1 [Carica papaya] | Back alignment and taxonomy information |
|---|
| >gi|4090533|gb|AAC98808.1| ACC oxidase [Carica papaya] gi|38141531|emb|CAE53415.1| 1-aminocyclopropane-1-carboxylate oxidase [Carica papaya] gi|54888572|emb|CAH68522.1| 1-aminocyclopropane-1-carboxylate oxidase [Carica papaya] | Back alignment and taxonomy information |
|---|
| >gi|224113841|ref|XP_002316589.1| 1-aminocyclopropane-1-carboxylate [Populus trichocarpa] gi|222859654|gb|EEE97201.1| 1-aminocyclopropane-1-carboxylate [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|225447149|ref|XP_002275341.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase 3 isoform 2 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|54606509|emb|CAH64841.1| 1-aminocyclopropane-1-carboxylate oxidase [Carica papaya] | Back alignment and taxonomy information |
|---|
| >gi|225447147|ref|XP_002275320.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase 3 isoform 1 [Vitis vinifera] gi|408451522|gb|AFU66005.1| 1-aminocyclopropane-1-carboxylic acid oxidase 2 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 240 | ||||||
| TAIR|locus:2205568 | 323 | EFE "ethylene-forming enzyme" | 0.85 | 0.631 | 0.712 | 2.1e-75 | |
| TAIR|locus:2027099 | 320 | ACO2 "ACC oxidase 2" [Arabidop | 0.870 | 0.653 | 0.671 | 1.7e-73 | |
| TAIR|locus:2008905 | 320 | AT1G12010 [Arabidopsis thalian | 0.841 | 0.631 | 0.699 | 2.8e-73 | |
| TAIR|locus:2031422 | 307 | AT1G77330 [Arabidopsis thalian | 0.816 | 0.638 | 0.522 | 1.5e-51 | |
| TAIR|locus:2050364 | 310 | ACO1 "ACC oxidase 1" [Arabidop | 0.8 | 0.619 | 0.482 | 9.8e-50 | |
| TAIR|locus:2169697 | 371 | AT5G05600 [Arabidopsis thalian | 0.712 | 0.460 | 0.369 | 7.9e-30 | |
| TAIR|locus:2127686 | 348 | AT4G10490 [Arabidopsis thalian | 0.570 | 0.393 | 0.434 | 5.6e-29 | |
| TAIR|locus:2127691 | 349 | AT4G10500 [Arabidopsis thalian | 0.504 | 0.346 | 0.495 | 7.1e-29 | |
| TAIR|locus:2202980 | 356 | AT1G78550 [Arabidopsis thalian | 0.570 | 0.384 | 0.388 | 9.1e-29 | |
| TAIR|locus:2153924 | 341 | DMR6 "DOWNY MILDEW RESISTANT 6 | 0.591 | 0.416 | 0.458 | 5e-28 |
| TAIR|locus:2205568 EFE "ethylene-forming enzyme" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 760 (272.6 bits), Expect = 2.1e-75, P = 2.1e-75
Identities = 149/209 (71%), Positives = 171/209 (81%)
Query: 36 MKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKG 95
MK+FA ++EK++ KKVFYGSK PTFGTKVSNYPPCP PDL+KG
Sbjct: 114 MKDFAGKIEKLSEELLDLLCENLGLEKGYLKKVFYGSKRPTFGTKVSNYPPCPNPDLVKG 173
Query: 96 LRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVL 155
LRAHTDAGGIILLFQDD+VSGLQLLKD +WVDVPP+KHSIV+NLGDQLEVITNGKYKSV
Sbjct: 174 LRAHTDAGGIILLFQDDKVSGLQLLKDGEWVDVPPVKHSIVVNLGDQLEVITNGKYKSVE 233
Query: 156 HRVIAQTEGN-RMSIASFYNPGSDAVIYPAPALVEKEAVNSQV--YPKFVFEDYMKLYAG 212
HRV++QT+G RMSIASFYNPGSD+VI+PAP L+ KEA + YP+FVFEDYMKLY+
Sbjct: 234 HRVLSQTDGEGRMSIASFYNPGSDSVIFPAPELIGKEAEKEKKENYPRFVFEDYMKLYSA 293
Query: 213 LKFQAKEPRFEAMKNMETIV--NLGPIAT 239
+KFQAKEPRFEAMK MET V N+GP+AT
Sbjct: 294 VKFQAKEPRFEAMKAMETTVANNVGPLAT 322
|
|
| TAIR|locus:2027099 ACO2 "ACC oxidase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2008905 AT1G12010 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2031422 AT1G77330 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2050364 ACO1 "ACC oxidase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2169697 AT5G05600 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2127686 AT4G10490 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2127691 AT4G10500 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2202980 AT1G78550 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2153924 DMR6 "DOWNY MILDEW RESISTANT 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 240 | |||
| PLN02299 | 321 | PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl | 1e-162 | |
| PLN02403 | 303 | PLN02403, PLN02403, aminocyclopropanecarboxylate o | 3e-89 | |
| PLN02393 | 362 | PLN02393, PLN02393, leucoanthocyanidin dioxygenase | 1e-53 | |
| PLN02639 | 337 | PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy | 2e-50 | |
| PLN03178 | 360 | PLN03178, PLN03178, leucoanthocyanidin dioxygenase | 1e-45 | |
| PLN02912 | 348 | PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy | 5e-45 | |
| PLN02704 | 335 | PLN02704, PLN02704, flavonol synthase | 3e-44 | |
| PLN03001 | 262 | PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy | 1e-41 | |
| PLN02758 | 361 | PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy | 1e-41 | |
| COG3491 | 322 | COG3491, PcbC, Isopenicillin N synthase and relate | 9e-38 | |
| PLN02216 | 357 | PLN02216, PLN02216, protein SRG1 | 1e-37 | |
| pfam03171 | 96 | pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe | 3e-37 | |
| PLN02254 | 358 | PLN02254, PLN02254, gibberellin 3-beta-dioxygenase | 8e-37 | |
| PLN00417 | 348 | PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy | 1e-36 | |
| PLN02276 | 361 | PLN02276, PLN02276, gibberellin 20-oxidase | 1e-34 | |
| PLN02947 | 374 | PLN02947, PLN02947, oxidoreductase | 2e-34 | |
| PLN02515 | 358 | PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di | 2e-31 | |
| PLN02904 | 357 | PLN02904, PLN02904, oxidoreductase | 2e-31 | |
| PLN02750 | 345 | PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy | 5e-29 | |
| PLN02984 | 341 | PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy | 3e-28 | |
| PLN02997 | 325 | PLN02997, PLN02997, flavonol synthase | 5e-28 | |
| PLN02156 | 335 | PLN02156, PLN02156, gibberellin 2-beta-dioxygenase | 4e-22 | |
| PTZ00273 | 320 | PTZ00273, PTZ00273, oxidase reductase; Provisional | 6e-22 | |
| PLN02485 | 329 | PLN02485, PLN02485, oxidoreductase | 4e-21 | |
| PLN02365 | 300 | PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy | 1e-18 | |
| PLN03002 | 332 | PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy | 2e-13 |
| >gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase | Back alignment and domain information |
|---|
Score = 450 bits (1159), Expect = e-162
Identities = 182/210 (86%), Positives = 198/210 (94%)
Query: 31 HVQKAMKEFAVELEKVAEQLLELLCENLGLEEGYLKKVFYGSKGPTFGTKVSNYPPCPKP 90
+K MK+FA+ELEK+AE+LL+LLCENLGLE+GYLKK F+GSKGPTFGTKVSNYPPCPKP
Sbjct: 112 EYRKVMKDFALELEKLAEELLDLLCENLGLEKGYLKKAFHGSKGPTFGTKVSNYPPCPKP 171
Query: 91 DLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGK 150
DL+KGLRAHTDAGGIILLFQDD+VSGLQLLKD +WVDVPPM+HSIV+NLGDQLEVITNGK
Sbjct: 172 DLVKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWVDVPPMRHSIVVNLGDQLEVITNGK 231
Query: 151 YKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMKLY 210
YKSV+HRV+AQT+GNRMSIASFYNPGSDAVIYPAPALVEKEA QVYPKFVFEDYMKLY
Sbjct: 232 YKSVMHRVVAQTDGNRMSIASFYNPGSDAVIYPAPALVEKEAEEEQVYPKFVFEDYMKLY 291
Query: 211 AGLKFQAKEPRFEAMKNMETIVNLGPIATV 240
AGLKFQAKEPRFEAMK MET VNL PIAT
Sbjct: 292 AGLKFQAKEPRFEAMKAMETTVNLNPIATA 321
|
Length = 321 |
| >gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase | Back alignment and domain information |
|---|
| >gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein | Back alignment and domain information |
|---|
| >gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein | Back alignment and domain information |
|---|
| >gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein | Back alignment and domain information |
|---|
| >gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase | Back alignment and domain information |
|---|
| >gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein | Back alignment and domain information |
|---|
| >gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein | Back alignment and domain information |
|---|
| >gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] | Back alignment and domain information |
|---|
| >gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 | Back alignment and domain information |
|---|
| >gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily | Back alignment and domain information |
|---|
| >gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase | Back alignment and domain information |
|---|
| >gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein | Back alignment and domain information |
|---|
| >gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase | Back alignment and domain information |
|---|
| >gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase | Back alignment and domain information |
|---|
| >gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase | Back alignment and domain information |
|---|
| >gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase | Back alignment and domain information |
|---|
| >gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein | Back alignment and domain information |
|---|
| >gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein | Back alignment and domain information |
|---|
| >gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase | Back alignment and domain information |
|---|
| >gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase | Back alignment and domain information |
|---|
| >gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase | Back alignment and domain information |
|---|
| >gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase | Back alignment and domain information |
|---|
| >gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 240 | |||
| PLN02299 | 321 | 1-aminocyclopropane-1-carboxylate oxidase | 100.0 | |
| PLN02216 | 357 | protein SRG1 | 100.0 | |
| PLN03001 | 262 | oxidoreductase, 2OG-Fe(II) oxygenase family protei | 100.0 | |
| PLN02639 | 337 | oxidoreductase, 2OG-Fe(II) oxygenase family protei | 100.0 | |
| PLN02912 | 348 | oxidoreductase, 2OG-Fe(II) oxygenase family protei | 100.0 | |
| PLN02758 | 361 | oxidoreductase, 2OG-Fe(II) oxygenase family protei | 100.0 | |
| PLN02947 | 374 | oxidoreductase | 100.0 | |
| PLN02254 | 358 | gibberellin 3-beta-dioxygenase | 100.0 | |
| PLN02393 | 362 | leucoanthocyanidin dioxygenase like protein | 100.0 | |
| PLN02904 | 357 | oxidoreductase | 100.0 | |
| PLN03178 | 360 | leucoanthocyanidin dioxygenase; Provisional | 100.0 | |
| PLN02997 | 325 | flavonol synthase | 100.0 | |
| PLN02276 | 361 | gibberellin 20-oxidase | 100.0 | |
| PLN02515 | 358 | naringenin,2-oxoglutarate 3-dioxygenase | 100.0 | |
| PLN02704 | 335 | flavonol synthase | 100.0 | |
| PLN02403 | 303 | aminocyclopropanecarboxylate oxidase | 100.0 | |
| KOG0143 | 322 | consensus Iron/ascorbate family oxidoreductases [S | 100.0 | |
| PLN02750 | 345 | oxidoreductase, 2OG-Fe(II) oxygenase family protei | 100.0 | |
| PLN02156 | 335 | gibberellin 2-beta-dioxygenase | 100.0 | |
| PLN00417 | 348 | oxidoreductase, 2OG-Fe(II) oxygenase family protei | 100.0 | |
| PLN02485 | 329 | oxidoreductase | 100.0 | |
| PTZ00273 | 320 | oxidase reductase; Provisional | 100.0 | |
| PLN03002 | 332 | oxidoreductase, 2OG-Fe(II) oxygenase family protei | 100.0 | |
| PLN02365 | 300 | 2-oxoglutarate-dependent dioxygenase | 100.0 | |
| PLN02984 | 341 | oxidoreductase, 2OG-Fe(II) oxygenase family protei | 100.0 | |
| COG3491 | 322 | PcbC Isopenicillin N synthase and related dioxygen | 100.0 | |
| PF03171 | 98 | 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent | 99.92 | |
| PF13640 | 100 | 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; | 96.09 | |
| smart00702 | 178 | P4Hc Prolyl 4-hydroxylase alpha subunit homologues | 94.32 | |
| PRK05467 | 226 | Fe(II)-dependent oxygenase superfamily protein; Pr | 93.87 | |
| PF12851 | 171 | Tet_JBP: Oxygenase domain of the 2OGFeDO superfami | 90.48 | |
| PF13532 | 194 | 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; | 85.24 |
| >PLN02299 1-aminocyclopropane-1-carboxylate oxidase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-59 Score=421.25 Aligned_cols=234 Identities=79% Similarity=1.233 Sum_probs=211.4
Q ss_pred CCCCCCCeeeeeecCC--CCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHhcCCCCCCccceeee
Q 026305 6 KALSSCATFLFQTWLK--SPILKMITGHVQKAMKEFAVELEKVAEQLLELLCENLGLEEGYLKKVFYGSKGPTFGTKVSN 83 (240)
Q Consensus 6 ~~l~w~~~~~~~~~p~--~~~~p~~~~~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~ 83 (240)
+.++|++.|++...|. .+.||+.+++||+.+++|+++|.+++.+|++++|++||+++++|.+.+.+..++.+.+|++|
T Consensus 85 ~~~d~ke~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lRl~~ 164 (321)
T PLN02299 85 EDLDWESTFFLRHLPESNLADIPDLDDEYRKVMKDFALELEKLAEELLDLLCENLGLEKGYLKKAFHGSKGPTFGTKVSN 164 (321)
T ss_pred CCcCHHHHcccccCCccccccCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCCCCccceeeeEe
Confidence 3568999988765553 46799889999999999999999999999999999999999999988754332446799999
Q ss_pred eCCCCCCCcCCCcccccCCCCceEEeecCCCCeeEEEeCCeEEEeccCCCcEEEecchhhHHHhCCcccccccccccCCC
Q 026305 84 YPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTE 163 (240)
Q Consensus 84 Yp~~~~~~~~~g~~~HtD~g~lTlL~qd~~~~GLqV~~~g~W~~V~p~~g~lvVniGd~L~~~TnG~~~s~~HRVv~~~~ 163 (240)
||||+.++...|+++|||+|+||||+||++++||||+++|+|++|+|.+|++|||+||+||+||||+|||+.|||+.+..
T Consensus 165 YPp~~~~~~~~G~~~HTD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pg~lvVNiGD~l~~~Tng~~kS~~HRVv~~~~ 244 (321)
T PLN02299 165 YPPCPKPDLVKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWVDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVVAQTD 244 (321)
T ss_pred cCCCCCcccccCccCccCCCeEEEEEecCCCCCcCcccCCeEEECCCCCCeEEEEeCHHHHHHhCCceecccceeecCCC
Confidence 99999888788999999999999999975699999999999999999999999999999999999999999999998877
Q ss_pred CCcccceeeecCCCCeEEecCccccccccCCCCCCCCccHHHHHHHHHhcccCCCchhhHhhhhhHHhhhcCCCcC
Q 026305 164 GNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIVNLGPIAT 239 (240)
Q Consensus 164 ~~R~Si~~F~~p~~d~~i~p~~~~~~~~~~~p~~y~~~~~~ey~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (240)
++|||++||+.|+.|++|+|++++++++.++|++|+|++++||++.+..++.+.++..++.++++++-.+..|++|
T Consensus 245 ~~R~Si~~F~~p~~d~~i~pl~~~v~~~~~~p~~y~p~~~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (321)
T PLN02299 245 GNRMSIASFYNPGSDAVIYPAPALVEKEAEEEQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKAMETTVNLNPIAT 320 (321)
T ss_pred CCEEEEEEEecCCCCceEeCchHhcCcccCCCcCCCCCcHHHHHHHHHHcccCCccchhhhhhccccccccCccCC
Confidence 7899999999999999999999999865435799999999999999998888877778999999999999999886
|
|
| >PLN02216 protein SRG1 | Back alignment and domain information |
|---|
| >PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein | Back alignment and domain information |
|---|
| >PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein | Back alignment and domain information |
|---|
| >PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein | Back alignment and domain information |
|---|
| >PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein | Back alignment and domain information |
|---|
| >PLN02947 oxidoreductase | Back alignment and domain information |
|---|
| >PLN02254 gibberellin 3-beta-dioxygenase | Back alignment and domain information |
|---|
| >PLN02393 leucoanthocyanidin dioxygenase like protein | Back alignment and domain information |
|---|
| >PLN02904 oxidoreductase | Back alignment and domain information |
|---|
| >PLN03178 leucoanthocyanidin dioxygenase; Provisional | Back alignment and domain information |
|---|
| >PLN02997 flavonol synthase | Back alignment and domain information |
|---|
| >PLN02276 gibberellin 20-oxidase | Back alignment and domain information |
|---|
| >PLN02515 naringenin,2-oxoglutarate 3-dioxygenase | Back alignment and domain information |
|---|
| >PLN02704 flavonol synthase | Back alignment and domain information |
|---|
| >PLN02403 aminocyclopropanecarboxylate oxidase | Back alignment and domain information |
|---|
| >KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
| >PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein | Back alignment and domain information |
|---|
| >PLN02156 gibberellin 2-beta-dioxygenase | Back alignment and domain information |
|---|
| >PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein | Back alignment and domain information |
|---|
| >PLN02485 oxidoreductase | Back alignment and domain information |
|---|
| >PTZ00273 oxidase reductase; Provisional | Back alignment and domain information |
|---|
| >PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein | Back alignment and domain information |
|---|
| >PLN02365 2-oxoglutarate-dependent dioxygenase | Back alignment and domain information |
|---|
| >PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein | Back alignment and domain information |
|---|
| >COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] | Back alignment and domain information |
|---|
| >PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit | Back alignment and domain information |
|---|
| >PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A | Back alignment and domain information |
|---|
| >smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues | Back alignment and domain information |
|---|
| >PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional | Back alignment and domain information |
|---|
| >PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro [] | Back alignment and domain information |
|---|
| >PF13532 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; PDB: 2IUW_A 3BTZ_A 3RZL_A 3RZH_A 3S5A_A 3RZG_A 3RZJ_A 3BUC_A 3H8X_A 3H8R_A | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 240 | ||||
| 1w9y_A | 319 | The Structure Of Acc Oxidase Length = 319 | 9e-86 | ||
| 1gp5_A | 356 | Anthocyanidin Synthase From Arabidopsis Thaliana Co | 1e-19 | ||
| 2brt_A | 355 | Anthocyanidin Synthase From Arabidopsis Thaliana Co | 1e-19 | ||
| 1gp4_A | 356 | Anthocyanidin Synthase From Arabidopsis Thaliana (S | 3e-19 | ||
| 3oox_A | 312 | Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenas | 2e-08 | ||
| 3on7_A | 280 | Crystal Structure Of A Putative Oxygenase (So_2589) | 2e-07 | ||
| 2bjs_A | 325 | Isopenicillin N Synthase C-Terminal Truncation Muta | 3e-04 | ||
| 1ips_A | 331 | Isopenicillin N Synthase From Aspergillus Nidulans | 3e-04 |
| >pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 | Back alignment and structure |
|
| >pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 | Back alignment and structure |
| >pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 | Back alignment and structure |
| >pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 | Back alignment and structure |
| >pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase Family Protein (Cc_0200) From Caulobacter Crescentus At 1.44 A Resolution Length = 312 | Back alignment and structure |
| >pdb|3ON7|A Chain A, Crystal Structure Of A Putative Oxygenase (So_2589) From Shewanella Oneidensis At 2.20 A Resolution Length = 280 | Back alignment and structure |
| >pdb|2BJS|A Chain A, Isopenicillin N Synthase C-Terminal Truncation Mutant Length = 325 | Back alignment and structure |
| >pdb|1IPS|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans (Manganese Complex) Length = 331 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 240 | |||
| 1w9y_A | 319 | 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge | 1e-122 | |
| 1gp6_A | 356 | Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep | 1e-100 | |
| 1odm_A | 331 | Isopenicillin N synthase; antibiotic biosynthesis, | 1e-56 | |
| 1dcs_A | 311 | Deacetoxycephalosporin C synthase; ferrous oxygena | 9e-54 | |
| 3oox_A | 312 | Putative 2OG-Fe(II) oxygenase family protein; stru | 1e-49 | |
| 3on7_A | 280 | Oxidoreductase, iron/ascorbate family; structural | 4e-49 |
| >1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 | Back alignment and structure |
|---|
Score = 348 bits (894), Expect = e-122
Identities = 176/208 (84%), Positives = 192/208 (92%), Gaps = 1/208 (0%)
Query: 34 KAMKEFAVELEKVAEQLLELLCENLGLEEGYLKKVFYGSKGPTFGTKVSNYPPCPKPDLI 93
+ M++FA LEK+AE+LL+LLCENLGLE+GYLK FYGSKGP FGTKVSNYPPCPKPDLI
Sbjct: 112 EVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLI 171
Query: 94 KGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKS 153
KGLRAHTDAGGIILLFQDD+VSGLQLLKD QW+DVPPM+HSIV+NLGDQLEVITNGKYKS
Sbjct: 172 KGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKS 231
Query: 154 VLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAV-NSQVYPKFVFEDYMKLYAG 212
V+HRVIAQ +G RMS+ASFYNPGSDAVIYPAPALVEKEA N QVYPKFVF+DYMKLYAG
Sbjct: 232 VMHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAG 291
Query: 213 LKFQAKEPRFEAMKNMETIVNLGPIATV 240
LKFQAKEPRFEAMK MET V + PIATV
Sbjct: 292 LKFQAKEPRFEAMKAMETDVKMDPIATV 319
|
| >1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 | Back alignment and structure |
|---|
| >1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 | Back alignment and structure |
|---|
| >1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 | Back alignment and structure |
|---|
| >3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 | Back alignment and structure |
|---|
| >3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 240 | |||
| 1w9y_A | 319 | 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge | 100.0 | |
| 1gp6_A | 356 | Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep | 100.0 | |
| 3oox_A | 312 | Putative 2OG-Fe(II) oxygenase family protein; stru | 100.0 | |
| 1odm_A | 331 | Isopenicillin N synthase; antibiotic biosynthesis, | 100.0 | |
| 1dcs_A | 311 | Deacetoxycephalosporin C synthase; ferrous oxygena | 100.0 | |
| 3on7_A | 280 | Oxidoreductase, iron/ascorbate family; structural | 100.0 | |
| 3dkq_A | 243 | PKHD-type hydroxylase SBAL_3634; putative oxygenas | 95.13 | |
| 2rg4_A | 216 | Uncharacterized protein; rhodobacterales, oceanico | 92.91 | |
| 2hbt_A | 247 | EGL nine homolog 1; prolyl hydroxylase, hypoxia in | 87.32 | |
| 3itq_A | 216 | Prolyl 4-hydroxylase, alpha subunit domain protei; | 87.3 | |
| 2jig_A | 224 | Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A { | 86.84 | |
| 3s57_A | 204 | Alpha-ketoglutarate-dependent dioxygenase ALKB HO; | 80.85 | |
| 2iuw_A | 238 | Alkylated repair protein ALKB homolog 3; oxidoredu | 80.63 |
| >1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-62 Score=436.18 Aligned_cols=235 Identities=76% Similarity=1.203 Sum_probs=200.5
Q ss_pred CCCCCCCeeeeeecCC--CCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHhcCCCCCCccceeee
Q 026305 6 KALSSCATFLFQTWLK--SPILKMITGHVQKAMKEFAVELEKVAEQLLELLCENLGLEEGYLKKVFYGSKGPTFGTKVSN 83 (240)
Q Consensus 6 ~~l~w~~~~~~~~~p~--~~~~p~~~~~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~ 83 (240)
+..+|++.|++...|. +|.||+.+++||+.+++|+++|.+++.+|+++||++||+++++|.+.+.+..++.+.+|++|
T Consensus 82 ~~~d~ke~~~~~~~p~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~ 161 (319)
T 1w9y_A 82 TDMDWESTFFLKHLPISNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSN 161 (319)
T ss_dssp GGCCCCEEEEEEEESCCGGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTTCCEEEEEEEE
T ss_pred CCCChhhheeeecCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcCCccceeEEEe
Confidence 4578999999887663 57899999999999999999999999999999999999999999998875322457899999
Q ss_pred eCCCCCCCcCCCcccccCCCCceEEeecCCCCeeEEEeCCeEEEeccCCCcEEEecchhhHHHhCCcccccccccccCCC
Q 026305 84 YPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTE 163 (240)
Q Consensus 84 Yp~~~~~~~~~g~~~HtD~g~lTlL~qd~~~~GLqV~~~g~W~~V~p~~g~lvVniGd~L~~~TnG~~~s~~HRVv~~~~ 163 (240)
||||++++...|+++|||+|+||||+||+.++||||+++|+|++|+|.||++|||+||+||+||||+|||+.|||+.++.
T Consensus 162 YPp~~~~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~SnG~~kS~~HRVv~~~~ 241 (319)
T 1w9y_A 162 YPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKD 241 (319)
T ss_dssp CCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSS
T ss_pred cCCCcccccccccccccCCCceEEEEecCCCCeeeEeeCCeEEEcccCCCcEEEEhHHHHHHHhCCeeecccceecCCCC
Confidence 99999988889999999999999999965699999999999999999999999999999999999999999999999888
Q ss_pred CCcccceeeecCCCCeEEecCccccccccC-CCCCCCCccHHHHHHHHHhcccCCCchhhHhhhhhHHhhhcCCCcCC
Q 026305 164 GNRMSIASFYNPGSDAVIYPAPALVEKEAV-NSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIVNLGPIATV 240 (240)
Q Consensus 164 ~~R~Si~~F~~p~~d~~i~p~~~~~~~~~~-~p~~y~~~~~~ey~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (240)
++|||++||++|+.|++|+|++++++++.+ +|++|++++++||++.++.+++.++...|+.+|++++....+||||+
T Consensus 242 ~~R~Sia~F~~p~~d~~i~pl~~l~~~~~~~~p~~Y~~~t~~ey~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T 1w9y_A 242 GARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKAMETDVKMDPIATV 319 (319)
T ss_dssp SCCEEEEEEEECCTTCEECCCGGGC--------CCCCCEEHHHHHHTTTTTTCSSHHHHHHHHHHC------------
T ss_pred CCceEEEEEecCCCCCeEeCchhhcCcccccCccccCcEeHHHHHHHHHhhhcCcchhHHHHHHHHhhhcccCCcccC
Confidence 899999999999999999999999986411 37899999999999999998888887779999999999999999996
|
| >1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* | Back alignment and structure |
|---|
| >3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} | Back alignment and structure |
|---|
| >1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... | Back alignment and structure |
|---|
| >1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* | Back alignment and structure |
|---|
| >3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} | Back alignment and structure |
|---|
| >3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} | Back alignment and structure |
|---|
| >2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A | Back alignment and structure |
|---|
| >2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A* | Back alignment and structure |
|---|
| >3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str} | Back alignment and structure |
|---|
| >2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A | Back alignment and structure |
|---|
| >3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A* | Back alignment and structure |
|---|
| >2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10 | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 240 | ||||
| d1w9ya1 | 307 | b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla | 6e-64 | |
| d1gp6a_ | 349 | b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr | 4e-43 | |
| d1dcsa_ | 311 | b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S | 9e-31 | |
| d1odma_ | 329 | b.82.2.1 (A:) Isopenicillin N synthase {Emericella | 1e-26 |
| >d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Clavaminate synthase-like family: Penicillin synthase-like domain: 1-aminocyclopropane-1-carboxylate oxidase 1 species: Petunia hybrida [TaxId: 4102]
Score = 199 bits (507), Expect = 6e-64
Identities = 169/200 (84%), Positives = 185/200 (92%), Gaps = 1/200 (0%)
Query: 31 HVQKAMKEFAVELEKVAEQLLELLCENLGLEEGYLKKVFYGSKGPTFGTKVSNYPPCPKP 90
++ M++FA LEK+AE+LL+LLCENLGLE+GYLK FYGSKGP FGTKVSNYPPCPKP
Sbjct: 108 EYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKP 167
Query: 91 DLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGK 150
DLIKGLRAHTDAGGIILLFQDD+VSGLQLLKD QW+DVPPM+HSIV+NLGDQLEVITNGK
Sbjct: 168 DLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGK 227
Query: 151 YKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAV-NSQVYPKFVFEDYMKL 209
YKSV+HRVIAQ +G RMS+ASFYNPGSDAVIYPAPALVEKEA N QVYPKFVF+DYMKL
Sbjct: 228 YKSVMHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKL 287
Query: 210 YAGLKFQAKEPRFEAMKNME 229
YAGLKFQAKEPRFEAMK ME
Sbjct: 288 YAGLKFQAKEPRFEAMKAME 307
|
| >d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 | Back information, alignment and structure |
|---|
| >d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 | Back information, alignment and structure |
|---|
| >d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 240 | |||
| d1w9ya1 | 307 | 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun | 100.0 | |
| d1gp6a_ | 349 | Anthocyanidin synthase {Mouse-ear cress (Arabidops | 100.0 | |
| d1odma_ | 329 | Isopenicillin N synthase {Emericella nidulans [Tax | 100.0 | |
| d1dcsa_ | 311 | Deacetoxycephalosporin C synthase {Streptomyces cl | 100.0 | |
| d2iuwa1 | 210 | AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606] | 91.63 | |
| d2fdia1 | 200 | Alkylated DNA repair protein AlkB {Escherichia col | 90.57 |
| >d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Clavaminate synthase-like family: Penicillin synthase-like domain: 1-aminocyclopropane-1-carboxylate oxidase 1 species: Petunia hybrida [TaxId: 4102]
Probab=100.00 E-value=2.9e-58 Score=406.83 Aligned_cols=224 Identities=75% Similarity=1.210 Sum_probs=201.0
Q ss_pred CCCCCCCCeeeeeecCC--CCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHhcCCCCCCccceee
Q 026305 5 GKALSSCATFLFQTWLK--SPILKMITGHVQKAMKEFAVELEKVAEQLLELLCENLGLEEGYLKKVFYGSKGPTFGTKVS 82 (240)
Q Consensus 5 ~~~l~w~~~~~~~~~p~--~~~~p~~~~~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~ 82 (240)
..+.+|++.|++...+. .+.||+.+++||+.+++|+++|.+++.+|+++++++||+++++|.+.+....++.+.+|++
T Consensus 80 ~~~~d~~e~~~~~~~~~~~~~~~~~~~~~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lr~~ 159 (307)
T d1w9ya1 80 VTDMDWESTFFLKHLPISNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVS 159 (307)
T ss_dssp GGGCCCCEEEEEEEESCCGGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTTCCEEEEEEE
T ss_pred ccccChhhhcccccccccCcccCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHhhhhccccccccceec
Confidence 35678999988877663 3567888999999999999999999999999999999999999999886655466789999
Q ss_pred eeCCCCCCCcCCCcccccCCCCceEEeecCCCCeeEEEeCCeEEEeccCCCcEEEecchhhHHHhCCcccccccccccCC
Q 026305 83 NYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQT 162 (240)
Q Consensus 83 ~Yp~~~~~~~~~g~~~HtD~g~lTlL~qd~~~~GLqV~~~g~W~~V~p~~g~lvVniGd~L~~~TnG~~~s~~HRVv~~~ 162 (240)
||||++.++...|+++|||+|+||||+|++.++||||+++|+|++|+|.+|++|||+||+||+||||+||||.|||+.++
T Consensus 160 ~YP~~~~~~~~~g~~~HtD~~~lTlL~q~~~~ggl~~~~~g~Wi~v~p~~~~~vVnvGD~l~~~Tng~~kSt~HRVv~~~ 239 (307)
T d1w9ya1 160 NYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQK 239 (307)
T ss_dssp ECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCS
T ss_pred CCCCCcccccccccccccccceeEEeeccCCCCeEEEecCCcEEEeccCCCeEEEEcchhhHHhhCCcccCcCceeecCC
Confidence 99999998888899999999999999998778999999999999999999999999999999999999999999999988
Q ss_pred CCCcccceeeecCCCCeEEecCccccccc-cCCCCCCCCccHHHHHHHHHhcccCCCchhhHhhhhh
Q 026305 163 EGNRMSIASFYNPGSDAVIYPAPALVEKE-AVNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNM 228 (240)
Q Consensus 163 ~~~R~Si~~F~~p~~d~~i~p~~~~~~~~-~~~p~~y~~~~~~ey~~~~~~~~~~~~~~~~~~~~~~ 228 (240)
+.+||||+||+.|+.|++|+|+|+|++.. .++|++|+|||++||++.+.+.+++.|+++|++||..
T Consensus 240 ~~~R~Si~~F~~p~~d~~i~p~~~~v~~~~~~~p~~y~~~t~~ey~~~~~~~~~~~~~~~~~~~~~~ 306 (307)
T d1w9ya1 240 DGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKAM 306 (307)
T ss_dssp SSCCEEEEEEEECCTTCEECCCGGGC--------CCCCCEEHHHHHHTTTTTTCSSHHHHHHHHHHC
T ss_pred CCCcEEEEEEeeCCCCCEEeCCHHHhcccCccCCCCCCCeeHHHHHHHHHhccCCcccHHHHHhhcc
Confidence 88999999999999999999999999742 2368999999999999999999999999999999864
|
| >d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
| >d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} | Back information, alignment and structure |
|---|
| >d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2fdia1 b.82.2.10 (A:15-214) Alkylated DNA repair protein AlkB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|