Citrus Sinensis ID: 026418
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 239 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SAH9 | 332 | Cinnamoyl-CoA reductase 2 | yes | no | 1.0 | 0.719 | 0.753 | 3e-99 | |
| Q9S9N9 | 344 | Cinnamoyl-CoA reductase 1 | no | no | 0.937 | 0.651 | 0.812 | 2e-97 | |
| Q9CA28 | 321 | Tetraketide alpha-pyrone | no | no | 0.933 | 0.694 | 0.370 | 6e-40 | |
| Q9XES5 | 348 | Bifunctional dihydroflavo | N/A | no | 0.966 | 0.663 | 0.367 | 1e-34 | |
| Q84KP0 | 347 | Bifunctional dihydroflavo | N/A | no | 0.958 | 0.659 | 0.361 | 1e-34 | |
| Q500U8 | 326 | Tetraketide alpha-pyrone | no | no | 0.924 | 0.677 | 0.349 | 1e-33 | |
| P51104 | 360 | Dihydroflavonol-4-reducta | N/A | no | 0.953 | 0.633 | 0.343 | 2e-33 | |
| P51110 | 337 | Dihydroflavonol-4-reducta | no | no | 0.832 | 0.590 | 0.393 | 1e-32 | |
| P51102 | 382 | Dihydroflavonol-4-reducta | no | no | 0.937 | 0.586 | 0.348 | 5e-31 | |
| P51108 | 357 | Dihydroflavonol-4-reducta | N/A | no | 0.941 | 0.630 | 0.344 | 3e-29 |
| >sp|Q9SAH9|CCR2_ARATH Cinnamoyl-CoA reductase 2 OS=Arabidopsis thaliana GN=CCR2 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 361 bits (926), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 180/239 (75%), Positives = 206/239 (86%)
Query: 1 MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK 60
M+EPAV G K VI AAA+AKV+RVVFTSSIGAVYM+PNR +VDE+CWSDL+FCKNTK
Sbjct: 94 MLEPAVNGAKFVIDAAAKAKVKRVVFTSSIGAVYMNPNRDTQAIVDENCWSDLDFCKNTK 153
Query: 61 NWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY 120
NWYCYGK +AE++AWE A A+GVDLVV+NPVLVLGP LQS +NAS++HILKYL GSAKTY
Sbjct: 154 NWYCYGKMLAEQSAWETAKAKGVDLVVLNPVLVLGPPLQSAINASLVHILKYLTGSAKTY 213
Query: 121 ANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTKCS 180
AN Q YV VRDVAL H+LVYE PSASGRY+ AE+ LHRGEVVEILAKFFPEYP+PTKCS
Sbjct: 214 ANLTQVYVDVRDVALGHVLVYEAPSASGRYILAETALHRGEVVEILAKFFPEYPLPTKCS 273
Query: 181 DEKNPRKKPYKFSNQKLKDLGLEFTPVKQCLYETVKSLQEKGHLPIPTQQQEESVKIQS 239
DEKNPR KPYKF+ QK+KDLGLEF P+KQ LYE+VKSLQEKGHLP+P + V I+S
Sbjct: 274 DEKNPRAKPYKFTTQKIKDLGLEFKPIKQSLYESVKSLQEKGHLPLPQDSNQNEVIIES 332
|
Cinnamoyl-CoA reductase probably involved in the formation of phenolic compounds associated with the hypersensitive response. Seems not to be involved in lignin biosynthesis. Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 4EC: 4 |
| >sp|Q9S9N9|CCR1_ARATH Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 355 bits (911), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 182/224 (81%), Positives = 196/224 (87%)
Query: 1 MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK 60
MVEPAV G K VI AAAEAKV+RVV TSSIGAVYMDPNR P+ VVDESCWSDL+FCKNTK
Sbjct: 99 MVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTK 158
Query: 61 NWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY 120
NWYCYGK VAE+AAWE A +GVDLVV+NPVLVLGP LQ T+NAS+ H+LKYL GSAKTY
Sbjct: 159 NWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTY 218
Query: 121 ANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTKCS 180
AN QAYV VRDVALAH+LVYE PSASGRYL AES HRGEVVEILAK FPEYP+PTKC
Sbjct: 219 ANLTQAYVDVRDVALAHVLVYEAPSASGRYLLAESARHRGEVVEILAKLFPEYPLPTKCK 278
Query: 181 DEKNPRKKPYKFSNQKLKDLGLEFTPVKQCLYETVKSLQEKGHL 224
DEKNPR KPYKF+NQK+KDLGLEFT KQ LY+TVKSLQEKGHL
Sbjct: 279 DEKNPRAKPYKFTNQKIKDLGLEFTSTKQSLYDTVKSLQEKGHL 322
|
Involved in the latter stages of lignin biosynthesis. Catalyzes one of the last steps of monolignol biosynthesis, the conversion of cinnamoyl-CoAs into their corresponding cinnamaldehydes. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 4 EC: 4 |
| >sp|Q9CA28|TKPR2_ARATH Tetraketide alpha-pyrone reductase 2 OS=Arabidopsis thaliana GN=TKPR2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 164 bits (414), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 84/227 (37%), Positives = 130/227 (57%), Gaps = 4/227 (1%)
Query: 1 MVEPAVIGTKNVIVAAAEAK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKN 58
+V+P + GT NV+ + A++K ++R+V TSS ++ + + ++ES WSD E+CK
Sbjct: 96 LVDPIIKGTTNVMSSCAKSKATLKRIVLTSSCSSIRYRFDATEASPLNESHWSDPEYCKR 155
Query: 59 TKNWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAK 118
WY Y K + E+ AW A +G+DLVVVNP V+GPLL ++++ IL G A
Sbjct: 156 FNLWYGYAKTLGEREAWRIAEEKGLDLVVVNPSFVVGPLLGPKPTSTLLMILAIAKGLAG 215
Query: 119 TYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTK 178
Y N +VH+ DV AH+L E P ASGR +C+ SV H E++E++ +P YP K
Sbjct: 216 EYPNFTVGFVHIDDVVAAHVLAMEEPKASGRIICSSSVAHWSEIIELMRNKYPNYPFENK 275
Query: 179 CSDEKNPRKKPYKFSNQKLKDLGL-EFTPVKQCLYETVKSLQEKGHL 224
CS+ K P+ +K+ +LG F + + + + S Q+KG L
Sbjct: 276 CSN-KEGDNSPHSMDTRKIHELGFGSFKSLPEMFDDCIISFQKKGLL 321
|
May be involved in the biosynthesis of hydroxylated tetraketide compounds that serve as sporopollenin precursors (the main constituents of exine). Acts on tetraketide alpha-pyrones and reduces the carbonyl function on the tetraketide alkyl chain to a secondary alcohol function. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|Q9XES5|DFRA_MALDO Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Malus domestica GN=DFR PE=1 SV=1 | Back alignment and function description |
|---|
Score = 146 bits (369), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/245 (36%), Positives = 143/245 (58%), Gaps = 14/245 (5%)
Query: 1 MVEPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNT 59
+++P + G +++ A +AK VR++VFTSS G V ++ ++ P V DES WSD+EFC++
Sbjct: 99 VIKPTINGLLDILKACQKAKTVRKLVFTSSAGTVNVEEHQKP--VYDESNWSDVEFCRSV 156
Query: 60 K--NW-YCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGS 116
K W Y K +AE+AAW+ A +D + + P LV+GP L ++ S+I L + +
Sbjct: 157 KMTGWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVIGPFLMPSMPPSLITGLSPILRN 216
Query: 117 AKTYANSVQA-YVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPI 175
Y Q YVH+ D+ L+HI +YE P A GRY+C+ E+V++L + +PEY I
Sbjct: 217 ESHYGIIKQGQYVHLDDLCLSHIYLYEHPKAEGRYICSSHDATIHELVKMLREKYPEYNI 276
Query: 176 PTKCSDEKNPRKKPYKFSNQKLKDLGLEFT-PVKQCLYETVKSLQEKGHLPIP-----TQ 229
PTK + +P FS++KL+++G EF ++ V + + KG +PIP T+
Sbjct: 277 PTKFKGIDD-NLEPVHFSSKKLREIGFEFKYSLEDMFVGAVDACRAKGLIPIPIPAEKTE 335
Query: 230 QQEES 234
EES
Sbjct: 336 AAEES 340
|
Bifunctional enzyme involved in the flavonoid metabolism. May use dihydroquercetin, dihydrokaempferol, eriodictyol, garbanzol (5-deoxydihydrokaempferol), dihydrofisetin (5-deoxydihydroquercetin), naringenin to a low extent (10%), but not 5-deoxynaringenin or butin (5-deoxyeriodictyol) as substrate. Malus domestica (taxid: 3750) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 3 EC: 4 |
| >sp|Q84KP0|DFRA_PYRCO Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Pyrus communis GN=DFR PE=1 SV=1 | Back alignment and function description |
|---|
Score = 146 bits (369), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/238 (36%), Positives = 141/238 (59%), Gaps = 9/238 (3%)
Query: 1 MVEPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNT 59
+++P + G +++ A +AK VR++VFTSS G V ++ ++ P V DES WSD+EFC++
Sbjct: 99 VIKPTINGLLDILKACQKAKTVRKLVFTSSAGTVNVEEHQKP--VYDESNWSDVEFCRSV 156
Query: 60 K--NW-YCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGS 116
K W Y K +AE+AAW+ A +D + + P LV+GP L ++ S+I L + +
Sbjct: 157 KMTGWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVIGPFLMPSMPPSLITGLSPILRN 216
Query: 117 AKTYANSVQA-YVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPI 175
Y Q YVH+ D+ L+HI +Y+ P A GRY+C+ E+V++L + +PEY I
Sbjct: 217 ESHYGIIKQGQYVHLDDLCLSHIYLYKHPKAEGRYICSSHDATIHELVKMLREKYPEYNI 276
Query: 176 PTKCSDEKNPRKKPYKFSNQKLKDLGLEFT-PVKQCLYETVKSLQEKGHLPIPTQQQE 232
PTK + +P FS++KL+++G EF ++ V + + KG +PIP ++ E
Sbjct: 277 PTKFKGIDD-NLEPVHFSSKKLREIGFEFKYSLEDMFVGAVDACRAKGLIPIPAEKTE 333
|
Bifunctional enzyme involved in the flavonoid metabolism. May use dihydroquercetin, eriodictyol, garbanzol (5-deoxydihydrokaempferol), dihydrofisetin (5-deoxydihydroquercetin), dihydrokaempferol to a low extent (5%), but not naringenin, 5-deoxynaringenin or butin (5-deoxyeriodictyol) as substrate. Pyrus communis (taxid: 23211) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 3 EC: 4 |
| >sp|Q500U8|TKPR1_ARATH Tetraketide alpha-pyrone reductase 1 OS=Arabidopsis thaliana GN=TKPR1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 143 bits (360), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 129/226 (57%), Gaps = 5/226 (2%)
Query: 1 MVEPAVIGTKNVIVAAAE-AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNT 59
++ PA+ GT NV+ + + ++RVV TSS V + + P +DES W+ +E CK
Sbjct: 99 ILRPAIEGTLNVLRSCRKNPSLKRVVLTSSSSTVRIRDDFDPKIPLDESIWTSVELCKRF 158
Query: 60 KNWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKT 119
+ WY K +AE+AAW+ + G+DLV V P ++GP L + ++ +L L G +
Sbjct: 159 QVWYALSKTLAEQAAWKFSEENGIDLVTVLPSFLVGPSLPPDLCSTASDVLGLLKGETEK 218
Query: 120 YA-NSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTK 178
+ + YVH+ DVA HI+V+E +A GRY+C+ +V+ E+V L+ +P PIP +
Sbjct: 219 FQWHGQMGYVHIDDVARTHIVVFEHEAAQGRYICSSNVISLEELVSFLSARYPSLPIPKR 278
Query: 179 CSDEKNPRKKPYKFSNQKLKDLGLEFTPVKQCLYETVKSLQEKGHL 224
EK R Y F K++ LGL+F +++ + + SL E+G+L
Sbjct: 279 F--EKLNRLH-YDFDTSKIQSLGLKFKSLEEMFDDCIASLVEQGYL 321
|
Involved in the biosynthesis of hydroxylated tetraketide compounds that serve as sporopollenin precursors (the main constituents of exine). Is essential for pollen wall development. Acts on tetraketide alpha-pyrones and reduces the carbonyl function on the tetraketide alkyl chain to a secondary alcohol function. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|P51104|DFRA_DIACA Dihydroflavonol-4-reductase OS=Dianthus caryophyllus GN=A PE=2 SV=1 | Back alignment and function description |
|---|
Score = 142 bits (359), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 136/236 (57%), Gaps = 8/236 (3%)
Query: 1 MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK 60
M++P + G +++ + +AK+RRVVFTSS G V ++ + P V DE+CWS L+F ++ K
Sbjct: 116 MIKPTINGMLDILKSCVKAKLRRVVFTSSGGTVNVEATQKP--VYDETCWSALDFIRSVK 173
Query: 61 --NW-YCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSA 117
W Y K +AE+AAW+ A ++ + + P LV+GP + ++ S+I L + +
Sbjct: 174 MTGWMYFVSKILAEQAAWKYAAENNLEFISIIPPLVVGPFIMPSMPPSLITALSPITRTE 233
Query: 118 KTYANSVQA-YVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIP 176
Y Q +VH+ D+ ++HI +YE P A+GRY+ + ++ ++L + +PEY +P
Sbjct: 234 SHYTIIKQGQFVHLDDLCMSHIFLYENPKANGRYIASACAATIYDIAKMLREEYPEYNVP 293
Query: 177 TKCSDEKNPRKKPYKFSNQKLKDLGLEFT-PVKQCLYETVKSLQEKGHLPIPTQQQ 231
TK D K + +FS++KL DLG EF +K V+S + KG LP+ +
Sbjct: 294 TKFKDYKEDMGQ-VQFSSKKLTDLGFEFKYGLKDMYTAAVESCRAKGLLPLSLEHH 348
|
Dianthus caryophyllus (taxid: 3570) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 1 EC: 9 |
| >sp|P51110|DFRA_VITVI Dihydroflavonol-4-reductase OS=Vitis vinifera GN=DFR PE=1 SV=1 | Back alignment and function description |
|---|
Score = 139 bits (351), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 125/211 (59%), Gaps = 12/211 (5%)
Query: 1 MVEPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNT 59
+++P + G ++ + A AK VRR+VFTSS G V + ++ P V DESCWSD+EFC+
Sbjct: 99 VIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLP--VYDESCWSDMEFCRAK 156
Query: 60 K--NW-YCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGS 116
K W Y K +AE+AAW+ A +D + + P LV+GP + S++ S+I L + G+
Sbjct: 157 KMTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGN 216
Query: 117 AKTYANSVQA-YVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPI 175
Y+ Q +VH+ D+ AHI ++E P A GRY+C+ ++ ++L + +PEY I
Sbjct: 217 EAHYSIIRQGQFVHLDDLCNAHIYLFENPKAEGRYICSSHDCIILDLAKMLREKYPEYNI 276
Query: 176 PT--KCSDEKNPRKKPYKFSNQKLKDLGLEF 204
PT K DE K FS++KL DLG EF
Sbjct: 277 PTEFKGVDE---NLKSVCFSSKKLTDLGFEF 304
|
Vitis vinifera (taxid: 29760) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 1 EC: 9 |
| >sp|P51102|DFRA_ARATH Dihydroflavonol-4-reductase OS=Arabidopsis thaliana GN=DFRA PE=3 SV=2 | Back alignment and function description |
|---|
Score = 134 bits (337), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 84/241 (34%), Positives = 139/241 (57%), Gaps = 17/241 (7%)
Query: 1 MVEPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEF--CK 57
+++P V G ++ A +AK VRR VFTSS G V ++ ++ +V DE+ WSDLEF K
Sbjct: 99 VIKPTVNGMLGIMKACVKAKTVRRFVFTSSAGTVNVEEHQK--NVYDENDWSDLEFIMSK 156
Query: 58 NTKNW-YCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGS 116
W Y K +AEKAAW+ A +G+D + + P LV+GP + +++ S+I L + +
Sbjct: 157 KMTGWMYFVSKTLAEKAAWDFAEEKGLDFISIIPTLVVGPFITTSMPPSLITALSPITRN 216
Query: 117 AKTYANSVQA-YVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKF----FP 171
Y+ Q YVH+ D+ AHI +YE +A GRY+C+ H ++ I +KF +P
Sbjct: 217 EAHYSIIRQGQYVHLDDLCNAHIFLYEQAAAKGRYICSS---HDATILTI-SKFLRPKYP 272
Query: 172 EYPIPTKCSDEKNPRKKPYKFSNQKLKDLGLEFT-PVKQCLYETVKSLQEKGHLPIPTQQ 230
EY +P+ + + K +FS++KL D+G F +++ E++++ ++KG LP+
Sbjct: 273 EYNVPSTF-EGVDENLKSIEFSSKKLTDMGFNFKYSLEEMFIESIETCRQKGFLPVSLSY 331
Query: 231 Q 231
Q
Sbjct: 332 Q 332
|
Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 1 EC: 9 |
| >sp|P51108|DFRA_MAIZE Dihydroflavonol-4-reductase OS=Zea mays GN=A1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 128 bits (322), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 136/235 (57%), Gaps = 10/235 (4%)
Query: 1 MVEPAVIGTKNVIVAAAEA-KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNT 59
+++P V G +++ A EA VRR+VFTSS G V ++ + P V DE W+D++FC+
Sbjct: 104 VIKPTVEGMISIMRACKEAGTVRRIVFTSSAGTVNLEERQRP--VYDEESWTDVDFCRRV 161
Query: 60 K--NW-YCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGS 116
K W Y K +AEKAA A G+DLV + P LV+GP + +++ S+I L + G+
Sbjct: 162 KMTGWMYFVSKTLAEKAALAYAAEHGLDLVTIIPTLVVGPFISASMPPSLITALALITGN 221
Query: 117 AKTYANSVQA-YVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPI 175
A Y+ Q +H+ D+ A I ++E P+A+GRY+C+ + + +L +PEY +
Sbjct: 222 APHYSILKQVQLIHLDDLCDAEIFLFENPAAAGRYVCSSHDVTIHGLAAMLRDRYPEYDV 281
Query: 176 PTKCSDEKNPRKKPYKFSNQKLKDLGLEF--TPVKQCLYETVKSLQEKGHLPIPT 228
P + ++ +P +FS++KL+DLG F ++ +++ QEKG +P+ T
Sbjct: 282 PQRFPGIQD-DLQPVRFSSKKLQDLGFTFRYKTLEDMFDAAIRTCQEKGLIPLAT 335
|
Zea mays (taxid: 4577) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 1 EC: 9 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 239 | ||||||
| 229368456 | 338 | cinnamoyl-CoA reductase 4 [Gossypium hir | 1.0 | 0.707 | 0.9 | 1e-124 | |
| 316939060 | 338 | cinnamoyl-CoA reductase [Hevea brasilien | 0.995 | 0.704 | 0.887 | 1e-121 | |
| 148608003 | 238 | cinnamoyl CoA reductase [Corymbia citrio | 0.995 | 1.0 | 0.882 | 1e-120 | |
| 2058311 | 336 | cinnamoyl-CoA reductase [Eucalyptus gunn | 0.995 | 0.708 | 0.887 | 1e-120 | |
| 148607993 | 238 | cinnamoyl CoA reductase [Angophora subve | 0.995 | 1.0 | 0.887 | 1e-120 | |
| 148608001 | 238 | cinnamoyl CoA reductase [Corymbia citrio | 0.995 | 1.0 | 0.878 | 1e-120 | |
| 118640877 | 270 | cinnamoyl CoA reductase [Corymbia citrio | 0.995 | 0.881 | 0.878 | 1e-119 | |
| 148607995 | 238 | cinnamoyl CoA reductase [Corymbia citrio | 0.995 | 1.0 | 0.878 | 1e-119 | |
| 148607997 | 238 | cinnamoyl CoA reductase [Corymbia citrio | 0.995 | 1.0 | 0.874 | 1e-119 | |
| 206574938 | 347 | cinnamoyl-CoA reductase [Vaccinium corym | 0.958 | 0.659 | 0.899 | 1e-119 |
| >gi|229368456|gb|ACQ59094.1| cinnamoyl-CoA reductase 4 [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 216/240 (90%), Positives = 227/240 (94%), Gaps = 1/240 (0%)
Query: 1 MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK 60
MVEPAVIGTKNVI+AAAEAKVRRVVFTSSIGAVYMDPNRSPD VVDESCWSDLEFCKNTK
Sbjct: 99 MVEPAVIGTKNVIMAAAEAKVRRVVFTSSIGAVYMDPNRSPDVVVDESCWSDLEFCKNTK 158
Query: 61 NWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY 120
NWYCYGKAVAE+AAWE A +GVDLV + PVLVLGPLLQ TVNASI+HILKYL GSAKTY
Sbjct: 159 NWYCYGKAVAEQAAWETAKEKGVDLVAITPVLVLGPLLQPTVNASIVHILKYLTGSAKTY 218
Query: 121 ANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTKCS 180
ANSVQAYVHVRDVALAH+LVYE PSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTKCS
Sbjct: 219 ANSVQAYVHVRDVALAHLLVYENPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTKCS 278
Query: 181 DEKNPRKKPYKFSNQKLKDLGLEFTPVKQCLYETVKSLQEKGHLPIPTQQQEES-VKIQS 239
DEKNPR KPYKF+NQKL+DLGLEFTPVKQCLYETVKSLQEKGHLPIP Q QE+S ++IQS
Sbjct: 279 DEKNPRAKPYKFTNQKLRDLGLEFTPVKQCLYETVKSLQEKGHLPIPAQHQEDSGLRIQS 338
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|316939060|gb|ADU64758.1| cinnamoyl-CoA reductase [Hevea brasiliensis] | Back alignment and taxonomy information |
|---|
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 212/239 (88%), Positives = 226/239 (94%), Gaps = 1/239 (0%)
Query: 1 MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK 60
MVEPAV GTKNV++AAAEAKVRRVVFTSSIGAVYMDPNR+PD VVDESCWSDL+FCKNTK
Sbjct: 101 MVEPAVNGTKNVVIAAAEAKVRRVVFTSSIGAVYMDPNRNPDVVVDESCWSDLDFCKNTK 160
Query: 61 NWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY 120
NWYCYGKAVAE+AAWE A +GVDLV VNPVLVLGPLLQSTVNASIIHILKYL GSAKTY
Sbjct: 161 NWYCYGKAVAEQAAWEVAKEKGVDLVAVNPVLVLGPLLQSTVNASIIHILKYLTGSAKTY 220
Query: 121 ANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTKCS 180
ANSVQAY HV+DVALAHILVYE PSASGRYLCAESVLHRGEVVEILAK FPEYPIPT+CS
Sbjct: 221 ANSVQAYAHVKDVALAHILVYEIPSASGRYLCAESVLHRGEVVEILAKSFPEYPIPTRCS 280
Query: 181 DEKNPRKKPYKFSNQKLKDLGLEFTPVKQCLYETVKSLQEKGHLPIPTQQQEESVKIQS 239
DEKNPR KPYKFSNQKLKDLG+EFTPVKQCLYETVKSLQE+GHLPIP +Q E+S++IQS
Sbjct: 281 DEKNPRAKPYKFSNQKLKDLGMEFTPVKQCLYETVKSLQERGHLPIP-KQPEDSIRIQS 338
|
Source: Hevea brasiliensis Species: Hevea brasiliensis Genus: Hevea Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|148608003|gb|ABQ95552.1| cinnamoyl CoA reductase [Corymbia citriodora subsp. variegata] gi|148608007|gb|ABQ95554.1| cinnamoyl CoA reductase [Corymbia citriodora subsp. variegata] | Back alignment and taxonomy information |
|---|
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 211/239 (88%), Positives = 225/239 (94%), Gaps = 1/239 (0%)
Query: 1 MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK 60
MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAV MDPNR PD VVDESCWSDLEFCK+TK
Sbjct: 1 MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVTMDPNRGPDVVVDESCWSDLEFCKSTK 60
Query: 61 NWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY 120
NWYCYGKAVAEKAA +EA RGVDLVV+NPVLVLGP+LQST+NASI+HILKYL GSAKTY
Sbjct: 61 NWYCYGKAVAEKAASDEAKERGVDLVVINPVLVLGPMLQSTINASIVHILKYLTGSAKTY 120
Query: 121 ANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTKCS 180
ANSVQAYVHV+DVALAHILV+ETPSASGRYLCAESVLHRG+VVEILAKFFPEYP PTKCS
Sbjct: 121 ANSVQAYVHVKDVALAHILVFETPSASGRYLCAESVLHRGDVVEILAKFFPEYPFPTKCS 180
Query: 181 DEKNPRKKPYKFSNQKLKDLGLEFTPVKQCLYETVKSLQEKGHLPIPTQQQEESVKIQS 239
DE NPR KPYKFSNQKL+DLGLEFTPVKQCLYETVKSLQEKGHLP+P E+SV+IQ+
Sbjct: 181 DEVNPRAKPYKFSNQKLRDLGLEFTPVKQCLYETVKSLQEKGHLPVPP-PPEDSVRIQA 238
|
Source: Corymbia citriodora subsp. variegata Species: Corymbia citriodora Genus: Corymbia Family: Myrtaceae Order: Myrtales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|2058311|emb|CAA56103.1| cinnamoyl-CoA reductase [Eucalyptus gunnii] | Back alignment and taxonomy information |
|---|
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 212/239 (88%), Positives = 224/239 (93%), Gaps = 1/239 (0%)
Query: 1 MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK 60
MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAV MDPNR PD VVDESCWSDLEFCK+TK
Sbjct: 99 MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVTMDPNRGPDVVVDESCWSDLEFCKSTK 158
Query: 61 NWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY 120
NWYCYGKAVAEKAAW EA RGVDLVV+NPVLVLGPLLQST+NASIIHILKYL GSAKTY
Sbjct: 159 NWYCYGKAVAEKAAWPEAKERGVDLVVINPVLVLGPLLQSTINASIIHILKYLTGSAKTY 218
Query: 121 ANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTKCS 180
ANSVQAYVHV+DVALAH+LV ETPSASGRYLCAESVLHRG+VVEILAKFFPEY +PTKCS
Sbjct: 219 ANSVQAYVHVKDVALAHVLVLETPSASGRYLCAESVLHRGDVVEILAKFFPEYNVPTKCS 278
Query: 181 DEKNPRKKPYKFSNQKLKDLGLEFTPVKQCLYETVKSLQEKGHLPIPTQQQEESVKIQS 239
DE NPR KPYKFSNQKL+DLGLEFTPVKQCLYETVKSLQEKGHLP+P+ E+SV+IQ
Sbjct: 279 DEVNPRVKPYKFSNQKLRDLGLEFTPVKQCLYETVKSLQEKGHLPVPS-PPEDSVRIQG 336
|
Source: Eucalyptus gunnii Species: Eucalyptus gunnii Genus: Eucalyptus Family: Myrtaceae Order: Myrtales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|148607993|gb|ABQ95547.1| cinnamoyl CoA reductase [Angophora subvelutina] | Back alignment and taxonomy information |
|---|
Score = 435 bits (1119), Expect = e-120, Method: Compositional matrix adjust.
Identities = 212/239 (88%), Positives = 223/239 (93%), Gaps = 1/239 (0%)
Query: 1 MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK 60
MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAV MDPNR PD VVDESCWSDLEFCK+TK
Sbjct: 1 MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVTMDPNRGPDVVVDESCWSDLEFCKSTK 60
Query: 61 NWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY 120
NWYCYGKAVAEKAA EEA RGVDLVV+NPVLVLGPLLQS +NASIIHILKYL GSAKTY
Sbjct: 61 NWYCYGKAVAEKAATEEAKERGVDLVVINPVLVLGPLLQSMINASIIHILKYLTGSAKTY 120
Query: 121 ANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTKCS 180
ANSVQAYVHV+DVALAHILV+E PSASGRYLCAESVLHRG+VVEILAKFFPEYP PTKCS
Sbjct: 121 ANSVQAYVHVKDVALAHILVFENPSASGRYLCAESVLHRGDVVEILAKFFPEYPFPTKCS 180
Query: 181 DEKNPRKKPYKFSNQKLKDLGLEFTPVKQCLYETVKSLQEKGHLPIPTQQQEESVKIQS 239
DE NPR KPYKFSNQKL+DLGLEFTPVKQCLYETVKSLQEKGHLP+P E+SV+IQ+
Sbjct: 181 DEVNPRAKPYKFSNQKLRDLGLEFTPVKQCLYETVKSLQEKGHLPVPP-PPEDSVRIQA 238
|
Source: Angophora subvelutina Species: Angophora subvelutina Genus: Angophora Family: Myrtaceae Order: Myrtales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|148608001|gb|ABQ95551.1| cinnamoyl CoA reductase [Corymbia citriodora subsp. variegata] | Back alignment and taxonomy information |
|---|
Score = 435 bits (1118), Expect = e-120, Method: Compositional matrix adjust.
Identities = 210/239 (87%), Positives = 224/239 (93%), Gaps = 1/239 (0%)
Query: 1 MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK 60
MVEPAVIG KNVIVAAAEAKVRRVVFTSSIGAV MDPNR PD VVDESCWSDLEFCK+TK
Sbjct: 1 MVEPAVIGAKNVIVAAAEAKVRRVVFTSSIGAVTMDPNRGPDVVVDESCWSDLEFCKSTK 60
Query: 61 NWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY 120
NWYCYGKAVAEKAA +EA RGVDLVV+NPVLVLGP+LQST+NASI+HILKYL GSAKTY
Sbjct: 61 NWYCYGKAVAEKAASDEAKERGVDLVVINPVLVLGPMLQSTINASIVHILKYLTGSAKTY 120
Query: 121 ANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTKCS 180
ANSVQAYVHV+DVALAHILV+ETPSASGRYLCAESVLHRG+VVEILAKFFPEYP PTKCS
Sbjct: 121 ANSVQAYVHVKDVALAHILVFETPSASGRYLCAESVLHRGDVVEILAKFFPEYPFPTKCS 180
Query: 181 DEKNPRKKPYKFSNQKLKDLGLEFTPVKQCLYETVKSLQEKGHLPIPTQQQEESVKIQS 239
DE NPR KPYKFSNQKL+DLGLEFTPVKQCLYETVKSLQEKGHLP+P E+SV+IQ+
Sbjct: 181 DEVNPRAKPYKFSNQKLRDLGLEFTPVKQCLYETVKSLQEKGHLPVPP-PPEDSVRIQA 238
|
Source: Corymbia citriodora subsp. variegata Species: Corymbia citriodora Genus: Corymbia Family: Myrtaceae Order: Myrtales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|118640877|gb|ABC40968.2| cinnamoyl CoA reductase [Corymbia citriodora subsp. variegata] | Back alignment and taxonomy information |
|---|
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 210/239 (87%), Positives = 224/239 (93%), Gaps = 1/239 (0%)
Query: 1 MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK 60
MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAV MDPNR PD VVDESCWSDLEFCK+TK
Sbjct: 33 MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVTMDPNRGPDVVVDESCWSDLEFCKSTK 92
Query: 61 NWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY 120
NWYCYGKAVAEKAA +EA RGVDLVV+NPVLVLGP+LQST+NASI+HILKYL GSAKTY
Sbjct: 93 NWYCYGKAVAEKAASDEAKERGVDLVVINPVLVLGPMLQSTINASIVHILKYLTGSAKTY 152
Query: 121 ANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTKCS 180
ANSVQAYVHV+DVALAHILV+ETPSASGRYLCAESVLHRG+VVEILAKFFPEYP PTKCS
Sbjct: 153 ANSVQAYVHVKDVALAHILVFETPSASGRYLCAESVLHRGDVVEILAKFFPEYPFPTKCS 212
Query: 181 DEKNPRKKPYKFSNQKLKDLGLEFTPVKQCLYETVKSLQEKGHLPIPTQQQEESVKIQS 239
DE PR KPYKFSNQKL+DLGLEFTPVKQCLYETVKSLQEKGHLP+P E+SV+IQ+
Sbjct: 213 DEVKPRAKPYKFSNQKLRDLGLEFTPVKQCLYETVKSLQEKGHLPVPP-PPEDSVRIQA 270
|
Source: Corymbia citriodora subsp. variegata Species: Corymbia citriodora Genus: Corymbia Family: Myrtaceae Order: Myrtales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|148607995|gb|ABQ95548.1| cinnamoyl CoA reductase [Corymbia citriodora subsp. variegata] gi|148607999|gb|ABQ95550.1| cinnamoyl CoA reductase [Corymbia citriodora subsp. variegata] gi|148608005|gb|ABQ95553.1| cinnamoyl CoA reductase [Corymbia citriodora subsp. variegata] | Back alignment and taxonomy information |
|---|
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 210/239 (87%), Positives = 224/239 (93%), Gaps = 1/239 (0%)
Query: 1 MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK 60
MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAV MDPNR PD VVDESCWSDLEFCK+TK
Sbjct: 1 MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVTMDPNRGPDVVVDESCWSDLEFCKSTK 60
Query: 61 NWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY 120
NWYCYGKAVAEKAA +EA RGVDLVV+NPVLVLGP+LQST+NASI+HILKYL GSAKTY
Sbjct: 61 NWYCYGKAVAEKAASDEAKERGVDLVVINPVLVLGPMLQSTINASIVHILKYLTGSAKTY 120
Query: 121 ANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTKCS 180
ANSVQAYVHV+DVALAHILV+ETPSASGRYLCAESVLHRG+VVEILAKFFPEYP PTKCS
Sbjct: 121 ANSVQAYVHVKDVALAHILVFETPSASGRYLCAESVLHRGDVVEILAKFFPEYPFPTKCS 180
Query: 181 DEKNPRKKPYKFSNQKLKDLGLEFTPVKQCLYETVKSLQEKGHLPIPTQQQEESVKIQS 239
DE PR KPYKFSNQKL+DLGLEFTPVKQCLYETVKSLQEKGHLP+P E+SV+IQ+
Sbjct: 181 DEVKPRAKPYKFSNQKLRDLGLEFTPVKQCLYETVKSLQEKGHLPVPP-PPEDSVRIQA 238
|
Source: Corymbia citriodora subsp. variegata Species: Corymbia citriodora Genus: Corymbia Family: Myrtaceae Order: Myrtales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|148607997|gb|ABQ95549.1| cinnamoyl CoA reductase [Corymbia citriodora subsp. variegata] | Back alignment and taxonomy information |
|---|
Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust.
Identities = 209/239 (87%), Positives = 224/239 (93%), Gaps = 1/239 (0%)
Query: 1 MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK 60
MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAV MDPNR PD VVDESCWSDLEFCK+TK
Sbjct: 1 MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVTMDPNRGPDVVVDESCWSDLEFCKSTK 60
Query: 61 NWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY 120
NWYCYGKAVAEKAA +EA RGVDLVV+NPVLVLGP+LQST+NASI+HILKYL GSAKTY
Sbjct: 61 NWYCYGKAVAEKAASDEAKERGVDLVVINPVLVLGPMLQSTINASIVHILKYLTGSAKTY 120
Query: 121 ANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTKCS 180
ANSVQAYVHV+DVALAHILV+ETPSASGRYLCAESVLHRG+VVEILAKFFPEYP PTKCS
Sbjct: 121 ANSVQAYVHVKDVALAHILVFETPSASGRYLCAESVLHRGDVVEILAKFFPEYPFPTKCS 180
Query: 181 DEKNPRKKPYKFSNQKLKDLGLEFTPVKQCLYETVKSLQEKGHLPIPTQQQEESVKIQS 239
DE PR KPY+FSNQKL+DLGLEFTPVKQCLYETVKSLQEKGHLP+P E+SV+IQ+
Sbjct: 181 DEVKPRAKPYEFSNQKLRDLGLEFTPVKQCLYETVKSLQEKGHLPVPP-PPEDSVRIQA 238
|
Source: Corymbia citriodora subsp. variegata Species: Corymbia citriodora Genus: Corymbia Family: Myrtaceae Order: Myrtales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|206574938|gb|ACI14382.1| cinnamoyl-CoA reductase [Vaccinium corymbosum] | Back alignment and taxonomy information |
|---|
Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust.
Identities = 206/229 (89%), Positives = 215/229 (93%)
Query: 1 MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK 60
MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAV MDPNR PD VVDESCWSDLEFCKNTK
Sbjct: 95 MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVTMDPNRGPDTVVDESCWSDLEFCKNTK 154
Query: 61 NWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY 120
NWYCYGKAVAE+AAW+EA +GVDLVVV PVLV+GPLLQ T+NASIIH+LKYLNGSAKTY
Sbjct: 155 NWYCYGKAVAEQAAWDEAKDKGVDLVVVTPVLVMGPLLQPTLNASIIHVLKYLNGSAKTY 214
Query: 121 ANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTKCS 180
ANSVQAYVHV+DVALAHILVYETPSASGRYLCAESVLHRG+VVEILAKFFPEYPIPTKC
Sbjct: 215 ANSVQAYVHVKDVALAHILVYETPSASGRYLCAESVLHRGDVVEILAKFFPEYPIPTKCK 274
Query: 181 DEKNPRKKPYKFSNQKLKDLGLEFTPVKQCLYETVKSLQEKGHLPIPTQ 229
DE PR KPYKFSNQKLKDLGLEFTP KQ LYETVKSLQ+KGHLPIPT
Sbjct: 275 DETKPRAKPYKFSNQKLKDLGLEFTPTKQSLYETVKSLQDKGHLPIPTH 323
|
Source: Vaccinium corymbosum Species: Vaccinium corymbosum Genus: Vaccinium Family: Ericaceae Order: Ericales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 239 | ||||||
| TAIR|locus:2025832 | 332 | CCR2 "cinnamoyl coa reductase" | 1.0 | 0.719 | 0.610 | 1.1e-76 | |
| TAIR|locus:2200427 | 344 | CCR1 "cinnamoyl coa reductase | 0.987 | 0.686 | 0.631 | 6.3e-76 | |
| TAIR|locus:2150315 | 326 | AT5G19440 [Arabidopsis thalian | 0.920 | 0.674 | 0.366 | 8.5e-33 | |
| TAIR|locus:2171258 | 324 | AT5G58490 [Arabidopsis thalian | 0.514 | 0.379 | 0.419 | 6.1e-31 | |
| TAIR|locus:2033904 | 325 | AT1G51410 [Arabidopsis thalian | 0.928 | 0.683 | 0.336 | 7.9e-30 | |
| TAIR|locus:2056171 | 318 | AT2G02400 [Arabidopsis thalian | 0.928 | 0.698 | 0.346 | 7.9e-30 | |
| TAIR|locus:2051008 | 321 | CRL1 "CCR(Cinnamoyl coA:NADP o | 0.903 | 0.672 | 0.334 | 2.4e-28 | |
| TAIR|locus:2012265 | 322 | AT1G09490 [Arabidopsis thalian | 0.506 | 0.375 | 0.365 | 2.7e-25 | |
| TAIR|locus:2012250 | 369 | AT1G09480 [Arabidopsis thalian | 0.506 | 0.327 | 0.373 | 3.4e-25 | |
| TAIR|locus:2012315 | 322 | AT1G09510 [Arabidopsis thalian | 0.916 | 0.680 | 0.318 | 9.7e-25 |
| TAIR|locus:2025832 CCR2 "cinnamoyl coa reductase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 772 (276.8 bits), Expect = 1.1e-76, P = 1.1e-76
Identities = 146/239 (61%), Positives = 166/239 (69%)
Query: 1 MVEPAVIGTKNXXXXXXXXXXXXXXFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK 60
M+EPAV G K FTSSIGAVYM+PNR +VDE+CWSDL+FCKNTK
Sbjct: 94 MLEPAVNGAKFVIDAAAKAKVKRVVFTSSIGAVYMNPNRDTQAIVDENCWSDLDFCKNTK 153
Query: 61 NWYCYGXXXXXXXXXXXXXXRXXXXXXXXXXXXXXXXXQSTVNASIIHILKYLNGSAKTY 120
NWYCYG + QS +NAS++HILKYL GSAKTY
Sbjct: 154 NWYCYGKMLAEQSAWETAKAKGVDLVVLNPVLVLGPPLQSAINASLVHILKYLTGSAKTY 213
Query: 121 ANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTKCS 180
AN Q YV VRDVAL H+LVYE PSASGRY+ AE+ LHRGEVVEILAKFFPEYP+PTKCS
Sbjct: 214 ANLTQVYVDVRDVALGHVLVYEAPSASGRYILAETALHRGEVVEILAKFFPEYPLPTKCS 273
Query: 181 DEKNPRKKPYKFSNQKLKDLGLEFTPVKQCLYETVKSLQEKGHLPIPTQQQEESVKIQS 239
DEKNPR KPYKF+ QK+KDLGLEF P+KQ LYE+VKSLQEKGHLP+P + V I+S
Sbjct: 274 DEKNPRAKPYKFTTQKIKDLGLEFKPIKQSLYESVKSLQEKGHLPLPQDSNQNEVIIES 332
|
|
| TAIR|locus:2200427 CCR1 "cinnamoyl coa reductase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 765 (274.4 bits), Expect = 6.3e-76, P = 6.3e-76
Identities = 151/239 (63%), Positives = 164/239 (68%)
Query: 1 MVEPAVIGTKNXXXXXXXXXXXXXXFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK 60
MVEPAV G K TSSIGAVYMDPNR P+ VVDESCWSDL+FCKNTK
Sbjct: 99 MVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTK 158
Query: 61 NWYCYGXXXXXXXXXXXXXXRXXXXXXXXXXXXXXXXXQSTVNASIIHILKYLNGSAKTY 120
NWYCYG + Q T+NAS+ H+LKYL GSAKTY
Sbjct: 159 NWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTY 218
Query: 121 ANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTKCS 180
AN QAYV VRDVALAH+LVYE PSASGRYL AES HRGEVVEILAK FPEYP+PTKC
Sbjct: 219 ANLTQAYVDVRDVALAHVLVYEAPSASGRYLLAESARHRGEVVEILAKLFPEYPLPTKCK 278
Query: 181 DEKNPRKKPYKFSNQKLKDLGLEFTPVKQCLYETVKSLQEKGHL---PIPTQQQEESVK 236
DEKNPR KPYKF+NQK+KDLGLEFT KQ LY+TVKSLQEKGHL P P +ESV+
Sbjct: 279 DEKNPRAKPYKFTNQKIKDLGLEFTSTKQSLYDTVKSLQEKGHLAPPPPPPSASQESVE 337
|
|
| TAIR|locus:2150315 AT5G19440 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
Identities = 82/224 (36%), Positives = 115/224 (51%)
Query: 1 MVEPAVIGTKNXXXX-XXXXXXXXXXFTSSIGAV-YMDPNRSPDDVVDESCWSDLEFCKN 58
+++PAV GT N TSS+ AV Y R+PD VDE+ +SD E C+
Sbjct: 101 LIDPAVKGTLNVLNSCAKASSVKRVVVTSSMAAVGYNGKPRTPDVTVDETWFSDPELCEA 160
Query: 59 TKNWYCYGXXXXXXXXXXXXXXRXXXXXXXXXXXXXXXXXQSTVNASIIHILKYLNGSAK 118
+K WY + Q T+N S IL +NG AK
Sbjct: 161 SKMWYVLSKTLAEDAAWKLAKEKGLDIVTINPAMVIGPLLQPTLNTSAAAILNLING-AK 219
Query: 119 TYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTK 178
T+ N +V+V+DVA AHI +E PSA+GRY E V+H E+V IL + +P P+P +
Sbjct: 220 TFPNLSFGWVNVKDVANAHIQAFEVPSANGRYCLVERVVHHSEIVNILRELYPNLPLPER 279
Query: 179 CSDEKNPRKKPYKFSNQKLKDLGLEFTPVKQCLYETVKSLQEKG 222
C DE NP Y+ S K + LG+++ P+K + ETV+SL+EKG
Sbjct: 280 CVDE-NPYVPTYQVSKDKTRSLGIDYIPLKVSIKETVESLKEKG 322
|
|
| TAIR|locus:2171258 AT5G58490 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 250 (93.1 bits), Expect = 6.1e-31, Sum P(2) = 6.1e-31
Identities = 52/124 (41%), Positives = 79/124 (63%)
Query: 101 TVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRG 160
++NAS+ +L+ L G +TY N VH +DVALAHILVYE P + GR+LC E++ H G
Sbjct: 201 SLNASMHMLLRLLQGCTETYENFFMGSVHFKDVALAHILVYEDPYSKGRHLCVEAISHYG 260
Query: 161 EVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKDLGLEFTPVKQCLYETVKSLQE 220
+ V +A+ +P Y +P K E P K +++KL DLGL+F +++ + E V+SL+
Sbjct: 261 DFVAKVAELYPNYNVP-KLPRETQPGLLRDKNASKKLIDLGLKFISMEEIIKEGVESLKS 319
Query: 221 KGHL 224
KG +
Sbjct: 320 KGFI 323
|
|
| TAIR|locus:2033904 AT1G51410 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 76/226 (33%), Positives = 115/226 (50%)
Query: 1 MVEPAVIGTKNXXXX-XXXXXXXXXXFTSSIGAV-YMDPNRSPDDVVDESCWSDLEFCKN 58
+++PAV GT N TSSI AV + R+P+ +VDE+ ++D ++C+
Sbjct: 100 LLDPAVKGTINVLSSCLKTSSVKRVVLTSSIAAVAFNGMPRTPETIVDETWFADPDYCRA 159
Query: 59 TKNWYCYGXXXXXXXXXXXXXXRXXXXXXXXXXXXXXXXXQSTVNASIIHILKYLNGSAK 118
+K WY Q T+N S +L + G A+
Sbjct: 160 SKLWYVLSKTLAENAAWKFAKENNLQLVSINPAMVIGPLLQPTLNTSAAAVLSLIKG-AQ 218
Query: 119 TYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTK 178
T+ N+ +V+V+DVA AHI +E P A GRY E V H EVV IL +P++ +P K
Sbjct: 219 TFPNATFGWVNVKDVANAHIQAFENPDADGRYCLVERVAHYSEVVNILHDLYPDFQLPEK 278
Query: 179 CSDEKNPRKKPYKFSNQKLKDLGLEFTPVKQCLYETVKSLQEKGHL 224
C+DEK YK S +K + LG+EF P++ + ETV+SL++KG +
Sbjct: 279 CADEKI-YIPTYKVSKEKAESLGVEFVPLEVSIKETVESLRDKGFI 323
|
|
| TAIR|locus:2056171 AT2G02400 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 78/225 (34%), Positives = 111/225 (49%)
Query: 1 MVEPAVIGTKNXXXXXXXXXXXXXXFTSSIGAVYMDPNRSPDDV-VDESCWSDLEFCKNT 59
+VEPAV GT N TSSI A+ +PN P+ V VDES WSDL+FCK+
Sbjct: 96 LVEPAVKGTINVLEAAKRFNVRRVVITSSISALVPNPNW-PEKVPVDESSWSDLDFCKSR 154
Query: 60 KNWYCYGXXXXXXXXXXXXXXRXXXXXXXXXXXXXXXXXQSTVNASIIHILKYLNGSAKT 119
+ WY Q +NAS +L+ L GS +T
Sbjct: 155 QKWYPISKTLAEKAAWEFSEKHGTNIVTIHPSTCLGPLLQPNLNASCAVLLQLLQGSTET 214
Query: 120 YANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTKC 179
+ VHV+DVA H++++ETP ASGR+LC + E +++K FPE+ + K
Sbjct: 215 QEHHWLGVVHVKDVAKGHVMLFETPDASGRFLCTNGIYQFSEFAALVSKLFPEFAVH-KF 273
Query: 180 SDEKNPRKKPYKFSNQKLKDLGLEFTPVKQCLYETVKSLQEKGHL 224
E P + ++L +LGL FT V+ + ETV+SL++KG L
Sbjct: 274 DKETQPGLTSCNDAAKRLIELGLVFTAVEDAVKETVQSLRDKGFL 318
|
|
| TAIR|locus:2051008 CRL1 "CCR(Cinnamoyl coA:NADP oxidoreductase)-like 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 74/221 (33%), Positives = 108/221 (48%)
Query: 1 MVEPAVIGTKNXXXXXXXXXXXXXXFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK 60
++ PAV GT N + SS+ A +M+P S + V+DE+CWSD E+CK T+
Sbjct: 100 LIAPAVDGTLNVLKACIEANVKRVVYVSSVAAAFMNPMWSKNQVLDEACWSDQEYCKKTE 159
Query: 61 NWYCYGXXXXXXXXXXXXXXRXXXXXXXXXXXXXX-XXXQSTVNASIIHILKYLNGSAKT 119
NWYC Q+TVNAS + +LK L +T
Sbjct: 160 NWYCLAKTRAESEAFEFAKRTGLHLVSVCPTLVLGPILQQNTVNASSLVLLKLLKEGFET 219
Query: 120 YANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTKC 179
N + V VRDVA A +LVYE A GRY+C + VVE L F+P Y P K
Sbjct: 220 RDNQERHLVDVRDVAQALLLVYEKAEAEGRYICTSHTVKEEIVVEKLKSFYPHYNYPKKY 279
Query: 180 SDEKNPRKKPYKFSNQKLKDLGLEFTPVKQCLYETVKSLQE 220
D ++ K S++KL+ LG + P+++ L ++V+S ++
Sbjct: 280 IDAEDR----VKVSSEKLQKLGWTYRPLEETLVDSVESYRK 316
|
|
| TAIR|locus:2012265 AT1G09490 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 202 (76.2 bits), Expect = 2.7e-25, Sum P(2) = 2.7e-25
Identities = 45/123 (36%), Positives = 72/123 (58%)
Query: 99 QSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLH 158
Q T+N S+ I+ ++NG + + VRDVAL HI ETPSA+GRY+ +
Sbjct: 199 QPTLNMSVELIVDFINGK-NPFNKRYYRFSDVRDVALVHIKALETPSANGRYIIDGPNMS 257
Query: 159 RGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKDLGLEFTPVKQCLYETVKSL 218
++++IL K FP+ I ++E + + +K+K+LG+EFTP+K L +T+ SL
Sbjct: 258 VNDIIDILRKLFPDLSI-ADTNEESEMNEMICQVCVEKVKNLGVEFTPMKSSLRDTIVSL 316
Query: 219 QEK 221
+EK
Sbjct: 317 KEK 319
|
|
| TAIR|locus:2012250 AT1G09480 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 207 (77.9 bits), Expect = 3.4e-25, Sum P(2) = 3.4e-25
Identities = 46/123 (37%), Positives = 75/123 (60%)
Query: 99 QSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLH 158
Q T+N S+ I+ ++NG + + +V VRDVALAHI ETPSA+GRY+ ++
Sbjct: 246 QPTLNFSVELIVDFINGK-NPFNSRFYRFVDVRDVALAHIKALETPSANGRYIIDGPIMS 304
Query: 159 RGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKDLGLEFTPVKQCLYETVKSL 218
++++IL + P+ I ++E + K +K+K+LG+EFTP+K L +T+ SL
Sbjct: 305 VSDIIDILRELLPDLCI-ADTNEESVMNEMLCKVCVEKVKNLGVEFTPMKSSLRDTIVSL 363
Query: 219 QEK 221
+EK
Sbjct: 364 KEK 366
|
|
| TAIR|locus:2012315 AT1G09510 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 71/223 (31%), Positives = 107/223 (47%)
Query: 1 MVEPAVIGTKNXXXXXXXXXXXXXXF-TSSIGAV-YMDPNRSPDDVVDESCWSDLEFCKN 58
+++PAV GT N TSS+ AV + +P P+D+VDESC+SD FC
Sbjct: 99 LIDPAVKGTLNVLKTCAKVSSVKRVIVTSSMAAVLFREPTLGPNDLVDESCFSDPNFCTE 158
Query: 59 TKNWYCYGXXXXXXXXXXXXXXRXXXXXXXXXXXXXXXXXQSTVNASIIHILKYLNGSAK 118
K WY + + ++ S+ I++ + G
Sbjct: 159 KKLWYALSKTLAEDEAWRFAKEKGLDLVVINPGLVLGPLLKPSLTFSVNVIVELITGK-D 217
Query: 119 TYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTK 178
+ N V VRDVALAHI +ETPSA+GRY+ V+ ++ +IL +FFP+ + K
Sbjct: 218 NFINKDFRLVDVRDVALAHIKAFETPSANGRYIIEGPVVTINDIEKILREFFPDLNLGNK 277
Query: 179 CSDEKNPRKKPYKFSNQKLKDLGLEFTPVKQCLYETVKSLQEK 221
+ YK +K+K LG+EFTP + L +T+ SL+EK
Sbjct: 278 -GEASEIIPVIYKLCVEKVKSLGIEFTPTEATLRDTILSLKEK 319
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9SAH9 | CCR2_ARATH | 1, ., 2, ., 1, ., 4, 4 | 0.7531 | 1.0 | 0.7198 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 239 | |||
| PLN02214 | 342 | PLN02214, PLN02214, cinnamoyl-CoA reductase | 1e-130 | |
| cd08958 | 293 | cd08958, FR_SDR_e, flavonoid reductase (FR), exten | 1e-110 | |
| PLN02662 | 322 | PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase | 3e-77 | |
| PLN02986 | 322 | PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase | 7e-54 | |
| cd05227 | 301 | cd05227, AR_SDR_e, aldehyde reductase, extended (e | 4e-49 | |
| PLN02650 | 351 | PLN02650, PLN02650, dihydroflavonol-4-reductase | 1e-48 | |
| PLN02989 | 325 | PLN02989, PLN02989, cinnamyl-alcohol dehydrogenase | 2e-46 | |
| PLN02583 | 297 | PLN02583, PLN02583, cinnamoyl-CoA reductase | 2e-41 | |
| cd05193 | 295 | cd05193, AR_like_SDR_e, aldehyde reductase, flavon | 3e-41 | |
| PLN00198 | 338 | PLN00198, PLN00198, anthocyanidin reductase; Provi | 2e-36 | |
| PLN02686 | 367 | PLN02686, PLN02686, cinnamoyl-CoA reductase | 5e-34 | |
| cd05228 | 318 | cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr | 7e-34 | |
| PLN02896 | 353 | PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase | 7e-34 | |
| COG0451 | 314 | COG0451, WcaG, Nucleoside-diphosphate-sugar epimer | 5e-23 | |
| TIGR03466 | 328 | TIGR03466, HpnA, hopanoid-associated sugar epimera | 3e-19 | |
| pfam01370 | 233 | pfam01370, Epimerase, NAD dependent epimerase/dehy | 8e-11 | |
| cd08946 | 200 | cd08946, SDR_e, extended (e) SDRs | 1e-10 | |
| pfam01073 | 280 | pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr | 2e-10 | |
| cd05263 | 293 | cd05263, MupV_like_SDR_e, Pseudomonas fluorescens | 2e-08 | |
| COG3320 | 382 | COG3320, COG3320, Putative dehydrogenase domain of | 2e-05 | |
| cd05235 | 290 | cd05235, SDR_e1, extended (e) SDRs, subgroup 1 | 3e-05 | |
| cd05240 | 306 | cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase | 3e-05 | |
| cd05257 | 316 | cd05257, Arna_like_SDR_e, Arna decarboxylase_like, | 1e-04 | |
| cd05241 | 331 | cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d | 2e-04 | |
| cd05234 | 305 | cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, | 3e-04 | |
| cd09813 | 335 | cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD | 4e-04 | |
| cd05265 | 250 | cd05265, SDR_a1, atypical (a) SDRs, subgroup 1 | 6e-04 | |
| cd05232 | 303 | cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, | 7e-04 | |
| pfam07993 | 245 | pfam07993, NAD_binding_4, Male sterility protein | 7e-04 | |
| cd05256 | 304 | cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e | 0.001 | |
| COG1086 | 588 | COG1086, COG1086, Predicted nucleoside-diphosphate | 0.002 | |
| cd05243 | 203 | cd05243, SDR_a5, atypical (a) SDRs, subgroup 5 | 0.002 | |
| COG1087 | 329 | COG1087, GalE, UDP-glucose 4-epimerase [Cell envel | 0.003 | |
| pfam02719 | 280 | pfam02719, Polysacc_synt_2, Polysaccharide biosynt | 0.003 | |
| cd05247 | 323 | cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, | 0.004 |
| >gnl|CDD|177862 PLN02214, PLN02214, cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Score = 371 bits (954), Expect = e-130
Identities = 186/236 (78%), Positives = 202/236 (85%), Gaps = 1/236 (0%)
Query: 1 MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK 60
MVEPAV G K VI AAAEAKV+RVV TSSIGAVYMDPNR P+ VVDESCWSDL+FCKNTK
Sbjct: 99 MVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTK 158
Query: 61 NWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY 120
NWYCYGK VAE+AAWE A +GVDLVV+NPVLVLGP LQ T+NAS+ H+LKYL GSAKTY
Sbjct: 159 NWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTY 218
Query: 121 ANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTKCS 180
AN QAYV VRDVALAH+LVYE PSASGRYL AES HRGEVVEILAK FPEYP+PTKC
Sbjct: 219 ANLTQAYVDVRDVALAHVLVYEAPSASGRYLLAESARHRGEVVEILAKLFPEYPLPTKCK 278
Query: 181 DEKNPRKKPYKFSNQKLKDLGLEFTPVKQCLYETVKSLQEKGHL-PIPTQQQEESV 235
DEKNPR KPYKF+NQK+KDLGLEFT KQ LY+TVKSLQEKGHL P P +ES+
Sbjct: 279 DEKNPRAKPYKFTNQKIKDLGLEFTSTKQSLYDTVKSLQEKGHLAPPPPSSSQESL 334
|
Length = 342 |
| >gnl|CDD|187661 cd08958, FR_SDR_e, flavonoid reductase (FR), extended (e) SDRs | Back alignment and domain information |
|---|
Score = 318 bits (818), Expect = e-110
Identities = 117/203 (57%), Positives = 143/203 (70%), Gaps = 2/203 (0%)
Query: 1 MVEPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNT 59
M+EPAV GT NV+ A A+AK V+RVVFTSS+ AV +PNR VVDESCWSDL+FCK T
Sbjct: 92 MIEPAVKGTLNVLEACAKAKSVKRVVFTSSVAAVVWNPNRGEGKVVDESCWSDLDFCKKT 151
Query: 60 KNWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKT 119
K WY K +AEKAAWE A G+DLV VNP LV+GP LQ ++N+S IL L G+A+
Sbjct: 152 KLWYALSKTLAEKAAWEFAEENGLDLVTVNPSLVVGPFLQPSLNSSSQLILSLLKGNAEM 211
Query: 120 YANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTKC 179
Y N A VHV DVA AHIL+YE PSASGRY+C+ V+ R E+ +LAK +P+Y IPTK
Sbjct: 212 YQNGSLALVHVDDVADAHILLYEKPSASGRYICSSHVVTRPELAALLAKKYPQYNIPTKF 271
Query: 180 SDEKNPRKKPYKFSNQKLKDLGL 202
D+ P K S++KLKDLG
Sbjct: 272 EDD-QPGVARVKLSSKKLKDLGF 293
|
This subgroup contains FRs of the extended SDR-type and related proteins. These FRs act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites; they have the characteristic active site triad of the SDRs (though not the upstream active site Asn) and a NADP-binding motif that is very similar to the typical extended SDR motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|178268 PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Score = 235 bits (602), Expect = 3e-77
Identities = 109/226 (48%), Positives = 152/226 (67%), Gaps = 4/226 (1%)
Query: 1 MVEPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAV-YMDPNRSPDDVVDESCWSDLEFCKN 58
+++PAV GT NV+ + A+ V+RVV TSS+ AV Y +PD VVDE+ +SD FC+
Sbjct: 98 LIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEE 157
Query: 59 TKNWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAK 118
+K WY K +AE+AAW+ A G+D+V +NP +V+GPLLQ T+N S IL +NG A+
Sbjct: 158 SKLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLING-AQ 216
Query: 119 TYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTK 178
T+ N+ +V VRDVA AHI +E PSASGRY E V+H EVV+IL + +P +P K
Sbjct: 217 TFPNASYRWVDVRDVANAHIQAFEIPSASGRYCLVERVVHYSEVVKILHELYPTLQLPEK 276
Query: 179 CSDEKNPRKKPYKFSNQKLKDLGLEFTPVKQCLYETVKSLQEKGHL 224
C+D+K P Y+ S +K K LG+EF P++ L +TV+SL+EKG L
Sbjct: 277 CADDK-PYVPTYQVSKEKAKSLGIEFIPLEVSLKDTVESLKEKGFL 321
|
Length = 322 |
| >gnl|CDD|178567 PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Score = 175 bits (445), Expect = 7e-54
Identities = 95/223 (42%), Positives = 140/223 (62%), Gaps = 4/223 (1%)
Query: 1 MVEPAVIGTKNVIVAAAE-AKVRRVVFTSSIGAV-YMDPNRSPDDVVDESCWSDLEFCKN 58
+++PA+ GT NV+ E V+RV+ TSS AV + P +DVVDE+ +SD C+
Sbjct: 99 LIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRE 158
Query: 59 TKNWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAK 118
TKNWY K +AE AAWE A G+D+VV+NP + GPLLQ T+N S+ I+ ++NG
Sbjct: 159 TKNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGK-N 217
Query: 119 TYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTK 178
+ N +V VRDVALAHI ETPSA+GRY+ ++ ++++IL + FP+ I
Sbjct: 218 LFNNRFYRFVDVRDVALAHIKALETPSANGRYIIDGPIMSVNDIIDILRELFPDLCI-AD 276
Query: 179 CSDEKNPRKKPYKFSNQKLKDLGLEFTPVKQCLYETVKSLQEK 221
++E + K +K+K+LG+EFTP+K L +T+ SL+EK
Sbjct: 277 TNEESEMNEMICKVCVEKVKNLGVEFTPMKSSLRDTILSLKEK 319
|
Length = 322 |
| >gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 162 bits (413), Expect = 4e-49
Identities = 75/207 (36%), Positives = 107/207 (51%), Gaps = 8/207 (3%)
Query: 1 MVEPAVIGTKNVIVAA-AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCK-N 58
+++PAV GT NV+ AA A V+RVV TSS+ AV P V E W+DL K N
Sbjct: 94 VIDPAVEGTLNVLEAAKAAGSVKRVVLTSSVAAVGDPTAEDPGKVFTEEDWNDLTISKSN 153
Query: 59 TKNWYCYGKAVAEKAAWE--EAVARGVDLVVVNPVLVLGPLLQST-VNASIIHILKYLNG 115
+ Y K +AEKAAWE + +L+ +NP VLGP L + +N+S I K L+G
Sbjct: 154 GLDAYIASKTLAEKAAWEFVKENKPKFELITINPGYVLGPSLLADELNSSNELINKLLDG 213
Query: 116 S-AKTYANSVQAYVHVRDVALAHILVYETPSASG-RYLCAESVLHRGEVVEILAKFFPEY 173
N YV VRDVA AH+ E+P A+G R++ + E+ ++L + FP+
Sbjct: 214 KLPAIPPNLPFGYVDVRDVADAHVRALESPEAAGQRFIVSAGPFSFQEIADLLREEFPQL 273
Query: 174 PIPTKCSDEKNPRKKPYKFSNQKLKDL 200
P + KF N+K ++L
Sbjct: 274 TAPFP-APNPLMLSILVKFDNRKSEEL 299
|
This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301 |
| >gnl|CDD|178256 PLN02650, PLN02650, dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Score = 163 bits (413), Expect = 1e-48
Identities = 86/243 (35%), Positives = 147/243 (60%), Gaps = 15/243 (6%)
Query: 1 MVEPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNT 59
+++P V G +++ A A+AK VRR+VFTSS G V ++ ++ P V DE CWSDL+FC+
Sbjct: 99 VIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKP--VYDEDCWSDLDFCRRK 156
Query: 60 K--NW-YCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGS 116
K W Y K +AEKAAW+ A G+D + + P LV+GP + +++ S+I L + G+
Sbjct: 157 KMTGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGN 216
Query: 117 AKTYANSVQA-YVHVRDVALAHILVYETPSASGRYLCA--ESVLHRGEVVEILAKFFPEY 173
Y+ Q +VH+ D+ AHI ++E P+A GRY+C+ ++ +H ++ ++L + +PEY
Sbjct: 217 EAHYSIIKQGQFVHLDDLCNAHIFLFEHPAAEGRYICSSHDATIH--DLAKMLREKYPEY 274
Query: 174 PIPTKCSD-EKNPRKKPYKFSNQKLKDLGLEFT-PVKQCLYETVKSLQEKGHLPIPTQQQ 231
IP + +++ K +FS++KL DLG F ++ +++ +EKG +P+ +Q
Sbjct: 275 NIPARFPGIDED--LKSVEFSSKKLTDLGFTFKYSLEDMFDGAIETCREKGLIPLSHAKQ 332
Query: 232 EES 234
Sbjct: 333 SIG 335
|
Length = 351 |
| >gnl|CDD|178569 PLN02989, PLN02989, cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Score = 156 bits (395), Expect = 2e-46
Identities = 87/224 (38%), Positives = 131/224 (58%), Gaps = 4/224 (1%)
Query: 1 MVEPAVIGTKNVIVAAAE-AKVRRVVFTSSIGAVYMDPNR-SPDDVVDESCWSDLEFCKN 58
++ PAV GT NV+ + + V+RV+ TSS+ AV + P+DVVDE+ +++ F +
Sbjct: 100 LINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEE 159
Query: 59 TKNWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAK 118
K WY K +AE AAW A +DL+V+NP LV GP+LQ T+N S+ I++ + G
Sbjct: 160 RKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGK-N 218
Query: 119 TYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTK 178
+ + +V VRDVALAH+ ETPSA+GRY+ V+ ++ +L +FFP+ I +
Sbjct: 219 PFNTTHHRFVDVRDVALAHVKALETPSANGRYIIDGPVVTIKDIENVLREFFPDLCIADR 278
Query: 179 CSDEKNPRKKPYKFSNQKLKDLGL-EFTPVKQCLYETVKSLQEK 221
D + K+K LG+ EFTP + L +TV SL+EK
Sbjct: 279 NEDITELNSVTFNVCLDKVKSLGIIEFTPTETSLRDTVLSLKEK 322
|
Length = 325 |
| >gnl|CDD|178195 PLN02583, PLN02583, cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Score = 142 bits (360), Expect = 2e-41
Identities = 71/209 (33%), Positives = 105/209 (50%), Gaps = 14/209 (6%)
Query: 1 MVEPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVY--MDPNRSPDDVVDESCWSDLEFCK 57
MV+ V NV+ A A+ + +VVFTSS+ AV D + DV DE WSD FC+
Sbjct: 99 MVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDV-DERSWSDQNFCR 157
Query: 58 NTKNWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSA 117
K W+ K ++EK AW A+ RGV++V +N L++GP L + + YL G+A
Sbjct: 158 KFKLWHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSL------TQHN--PYLKGAA 209
Query: 118 KTYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGE-VVEILAKFFPEYPIP 176
+ Y N V V V + AHI +E S+ GRYLC +++ E V++ P P P
Sbjct: 210 QMYENGVLVTVDVNFLVDAHIRAFEDVSSYGRYLCFNHIVNTEEDAVKLAQMLSPLIPSP 269
Query: 177 TKCSDEKNPRKKPYKFSNQKLKDLGLEFT 205
+ + + N+KL L +F
Sbjct: 270 PPYEMQGS-EVYQQRIRNKKLNKLMEDFA 297
|
Length = 297 |
| >gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 142 bits (359), Expect = 3e-41
Identities = 72/208 (34%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 1 MVEPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNT 59
+++PA+ GT N + AAA AK V+R V TSS G+V + V+DE W+ EF +
Sbjct: 91 VIKPAIGGTLNALKAAAAAKSVKRFVLTSSAGSVLIPKPNVEGIVLDEKSWNLEEFDSDP 150
Query: 60 KN--W-YCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGS 116
K W Y K +AEKAAW+ A +DL+ V P L +G + S +S + + G+
Sbjct: 151 KKSAWVYAASKTLAEKAAWKFADENNIDLITVIPTLTIGTIFDSETPSSSGWAMSLITGN 210
Query: 117 AKTY----ANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPE 172
YVHV D+ LAHI E P A GRY+C +++ L K +P
Sbjct: 211 EGVSPALALIPPGYYVHVVDICLAHIGCLELPIARGRYICTAGNFDWNTLLKTLRKKYPS 270
Query: 173 YPIPTKCSDEKNPRKKPYKFSNQKLKDL 200
Y PT D + + KFS+ KL ++
Sbjct: 271 YTFPT---DFPDQGQDLSKFSSAKLLEI 295
|
This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295 |
| >gnl|CDD|215100 PLN00198, PLN00198, anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Score = 130 bits (329), Expect = 2e-36
Identities = 82/238 (34%), Positives = 127/238 (53%), Gaps = 17/238 (7%)
Query: 1 MVEPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNT 59
M++PA+ G NV+ A A+AK V+RV+ TSS AV ++ V++E W+D+EF +
Sbjct: 102 MIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSE 161
Query: 60 K--NW-YCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGS 116
K W Y K +AEKAAW+ A +DL+ V P L+ GP L S + +S+ + + G+
Sbjct: 162 KPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGN 221
Query: 117 AKTYANSVQ---------AYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILA 167
+ N ++ + HV DV AHI + E SASGRY+C + E+ + L
Sbjct: 222 -EFLINGLKGMQMLSGSISITHVEDVCRAHIFLAEKESASGRYICCAANTSVPELAKFLI 280
Query: 168 KFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKDLGLEFT-PVKQCLYETVKSLQEKGHL 224
K +P+Y +PT D P K S++KL G F +++ +TV+ + KG L
Sbjct: 281 KRYPQYQVPTDFGD--FPSKAKLIISSEKLISEGFSFEYGIEEIYDQTVEYFKAKGLL 336
|
Length = 338 |
| >gnl|CDD|215370 PLN02686, PLN02686, cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Score = 124 bits (314), Expect = 5e-34
Identities = 75/210 (35%), Positives = 106/210 (50%), Gaps = 17/210 (8%)
Query: 1 MVEPAVIGTKNVIVAAAE-AKVRRVVFTSSIGA-VYMD-PNRSPDDVVDESCWSDLEFCK 57
M E ++NVI A VR+ VFTSS+ A V+ V+DE WSD FC+
Sbjct: 151 MAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESFCR 210
Query: 58 NTKNWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGP-LLQSTVNASIIHILKYLNGS 116
+ K WY GK AEKAAW A +G+ L + P LV GP + A+I YL G+
Sbjct: 211 DNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTATI----AYLKGA 266
Query: 117 AKTYANSVQAYVHVRDVALAHILVYE---TPSASGRYLCAESVLHRGEVVEILAKFFPEY 173
+ A+ + A V +A AH+ VYE +A GRY+C + V+ R + E LA+ +
Sbjct: 267 QEMLADGLLATADVERLAEAHVCVYEAMGNKTAFGRYICFDHVVSREDEAEELAR---QI 323
Query: 174 PIP-TKCSDEKNPRKKPYKF--SNQKLKDL 200
+P K + + P +F SN+KL L
Sbjct: 324 GLPINKIAGNSSSDDTPARFELSNKKLSRL 353
|
Length = 367 |
| >gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 123 bits (311), Expect = 7e-34
Identities = 79/241 (32%), Positives = 111/241 (46%), Gaps = 38/241 (15%)
Query: 6 VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDE-SCWSDLEFCKNTKNWYC 64
V GT+NV+ AA EA VRRVV TSSI A+ PD +DE + W++ F N Y
Sbjct: 88 VEGTRNVLDAALEAGVRRVVHTSSIAAL----GGPPDGRIDETTPWNERPFP----NDYY 139
Query: 65 YGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSV 124
K +AE EA A G+D+V+VNP V GP + ++ + +L YLNG Y
Sbjct: 140 RSKLLAELEVL-EAAAEGLDVVIVNPSAVFGPGDEGP-TSTGLDVLDYLNGKLPAYPPGG 197
Query: 125 QAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFF----PEYPIPT--- 177
++V VRDVA HI E RY+ L ++ E LA+ P IP
Sbjct: 198 TSFVDVRDVAEGHIAAMEKGRRGERYILGGENLSFKQLFETLAEITGVKPPRRTIPPWLL 257
Query: 178 ----KCSDEKNP--RKKP-------------YKFSNQKLK-DLGLEFTPVKQCLYETVKS 217
S+ K K P Y +S+ K + +LG P+++ L +T+
Sbjct: 258 KAVAALSELKARLTGKPPLLTPRTARVLRRNYLYSSDKARRELGYSPRPLEEALRDTLAW 317
Query: 218 L 218
L
Sbjct: 318 L 318
|
This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318 |
| >gnl|CDD|178484 PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 124 bits (312), Expect = 7e-34
Identities = 80/241 (33%), Positives = 130/241 (53%), Gaps = 15/241 (6%)
Query: 1 MVEPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYM-DPNRSPDDVVDESCWSDLEFCKN 58
+++PA+ GT NV+ + ++K V+RVVFTSSI + D N VVDE+C + ++ N
Sbjct: 109 VIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVWN 168
Query: 59 TK--NW-YCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNG 115
TK W Y K + E+AA++ A G+DLV V V GP L +V +SI +L + G
Sbjct: 169 TKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITG 228
Query: 116 SAKTYA--NSVQ------AYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILA 167
+K ++ ++V A VH+ D+ AHI + E A GRY+C E++ L+
Sbjct: 229 DSKLFSILSAVNSRMGSIALVHIEDICDAHIFLMEQTKAEGRYICCVDSYDMSELINHLS 288
Query: 168 KFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKDLGLEFT-PVKQCLYETVKSLQEKGHLPI 226
K +P I + +EK + S++KL+DLG E+ +++ + +T+ + G LP
Sbjct: 289 KEYPCSNIQVRLDEEKRGSIPS-EISSKKLRDLGFEYKYGIEEIIDQTIDCCVDHGFLPQ 347
Query: 227 P 227
Sbjct: 348 N 348
|
Length = 353 |
| >gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 94.6 bits (235), Expect = 5e-23
Identities = 55/233 (23%), Positives = 93/233 (39%), Gaps = 19/233 (8%)
Query: 1 MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK 60
++ V GT N++ AA A V+R VF SS+ VY DP P +DE
Sbjct: 88 FLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDP---PPLPIDED-----LGPPRPL 139
Query: 61 NWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIH--ILKYLNG-SA 117
N Y K AE+ A G+ +V++ P V GP + +++ ++ I + L G
Sbjct: 140 NPYGVSKLAAEQLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPI 199
Query: 118 KTYANSVQA---YVHVRDVALAHILVYETPSASGRYLCAESVLHR-GEVVEILAKFFPEY 173
+V+V DVA A +L E P + + + E+ E +A+
Sbjct: 200 IVIGGDGSQTRDFVYVDDVADALLLALENPDGGVFNIGSGTAEITVRELAEAVAEAVGSK 259
Query: 174 PIPTKCSDEKNPR--KKPYKFSNQKLKD-LGLE-FTPVKQCLYETVKSLQEKG 222
++ K + LG E +++ L +T++ L +K
Sbjct: 260 APLIVYIPLGRRGDLREGKLLDISKARAALGWEPKVSLEEGLADTLEWLLKKL 312
|
Length = 314 |
| >gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Score = 84.3 bits (209), Expect = 3e-19
Identities = 75/252 (29%), Positives = 117/252 (46%), Gaps = 36/252 (14%)
Query: 1 MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK 60
M V GT+N++ AA EA V RVV+TSS+ + + R DE+ S L+ +
Sbjct: 85 MYAANVEGTRNLLRAALEAGVERVVYTSSVATLGV---RGDGTPADETTPSSLD---DMI 138
Query: 61 NWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPL-LQSTVNASIIHILKYLNGSAKT 119
Y K +AE+AA E A +G+ +V+VNP +GP ++ T I I+ +LNG
Sbjct: 139 GHYKRSKFLAEQAALEMAAEKGLPVVIVNPSTPIGPRDIKPTPTGRI--IVDFLNGKMPA 196
Query: 120 YANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKF---------F 170
Y ++ VHV DVA H+L E RY+ L ++++ LA+
Sbjct: 197 YVDTGLNLVHVDDVAEGHLLALERGRIGERYILGGENLTLKQILDKLAEITGRPAPRVKL 256
Query: 171 PEYPI-PTKCSDE-------KNPR---------KKPYKFSNQK-LKDLGLEFTPVKQCLY 212
P + + P E K PR KK FS+ K +++LG P ++ L
Sbjct: 257 PRWLLLPVAWGAEALARLTGKEPRVTVDGVRMAKKKMFFSSAKAVRELGYRQRPAREALR 316
Query: 213 ETVKSLQEKGHL 224
+ V+ + G+L
Sbjct: 317 DAVEWFRANGYL 328
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328 |
| >gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family | Back alignment and domain information |
|---|
Score = 59.6 bits (145), Expect = 8e-11
Identities = 41/153 (26%), Positives = 58/153 (37%), Gaps = 15/153 (9%)
Query: 6 VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCY 65
V+GT ++ AA A V+R VF SS VY D P + E + Y
Sbjct: 91 VLGTLRLLEAARRAGVKRFVFASS-SEVYGDVADPP---ITEDT------PLGPLSPYAA 140
Query: 66 GKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIH--ILKYLNGSAKTY--- 120
K AE+ A A G+ V++ V GP +I I + L G
Sbjct: 141 AKLAAERLVEAYARAYGLRAVILRLFNVYGPGNPDPFVTHVIPALIRRILEGKPILLLGD 200
Query: 121 ANSVQAYVHVRDVALAHILVYETPSASGRYLCA 153
+ +++V DVA A +L E P Y
Sbjct: 201 GTQRRDFLYVDDVARAILLALEHPDGGEIYNIG 233
|
This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233 |
| >gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 58.9 bits (143), Expect = 1e-10
Identities = 37/153 (24%), Positives = 59/153 (38%), Gaps = 24/153 (15%)
Query: 6 VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCY 65
V+GT N++ AA +A V+R V+ SS +VY P +E E + Y
Sbjct: 58 VVGTLNLLEAARKAGVKRFVYASSA-SVYGSPE---GLPEEE------ETPPRPLSPYGV 107
Query: 66 GKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKY---------LNGS 116
K AE + G+ +V++ V GP Q +++ + G
Sbjct: 108 SKLAAEHLLRSYGESYGLPVVILRLANVYGP-GQRPRLDGVVNDFIRRALEGKPLTVFGG 166
Query: 117 AKTYANSVQAYVHVRDVALAHILVYETPSASGR 149
N + ++HV DV A + E P G
Sbjct: 167 ----GNQTRDFIHVDDVVRAILHALENPLEGGG 195
|
Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200 |
| >gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family | Back alignment and domain information |
|---|
Score = 59.3 bits (144), Expect = 2e-10
Identities = 44/153 (28%), Positives = 60/153 (39%), Gaps = 35/153 (22%)
Query: 6 VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVD-------ESCWSDLEFCKN 58
V GT+NV+ A +A VR +V+TSS+ V PN +V+ ES D
Sbjct: 93 VKGTQNVLDACVKAGVRVLVYTSSMEVVG--PNSYGQPIVNGDETTPYESTHQDP----- 145
Query: 59 TKNWYCYGKAVAEKAAWEE---AVARGVDLVVV--NPVLVLGP---LLQSTVNASIIHIL 110
Y KA+AEK + + G L P + G L +
Sbjct: 146 ----YPESKALAEKLVLKANGSTLKNGGRLYTCALRPAGIFGEGDPFLFPFLVRL----- 196
Query: 111 KYLNGSAKTYA---NSVQAYVHVRDVALAHILV 140
NG AK N + V+V +VA AHIL
Sbjct: 197 -LKNGLAKFRTGDKNVLSDRVYVGNVAWAHILA 228
|
The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280 |
| >gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 53.1 bits (128), Expect = 2e-08
Identities = 42/176 (23%), Positives = 67/176 (38%), Gaps = 31/176 (17%)
Query: 8 GTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGK 67
GT++V+ AA ++R + S+ Y+ NR + E L +N KN Y K
Sbjct: 103 GTEHVLELAARLDIQRFHYVSTA---YVAGNREGNIRETE-----LNPGQNFKNPYEQSK 154
Query: 68 AVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYL-------------N 114
A AE+ A + L V P +V+G T I L L
Sbjct: 155 AEAEQLVRAAATQ--IPLTVYRPSIVVGD--SKTGRIEKIDGLYELLNLLAKLGRWLPMP 210
Query: 115 GSAKTYANSVQAYVHVRDVALAHILVYETPSASGR--YLCAESVLHRGEVVEILAK 168
G+ N V V VA A + + + P A+G+ +L + E+ ++
Sbjct: 211 GNKGARLN----LVPVDYVADAIVYLSKKPEANGQIFHLTDPTPQTLREIADLFKS 262
|
This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|225857 COG3320, COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 44.3 bits (105), Expect = 2e-05
Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 4/95 (4%)
Query: 3 EPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDL-EFCKNTKN 61
V+GT V+ AA K + + + SSI + + VD S +
Sbjct: 109 GANVLGTAEVLRLAATGKPKPLHYVSSISVG--ETEYYSNFTVDFDEISPTRNVGQGLAG 166
Query: 62 WYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGP 96
Y K VAEK EA RG+ + + P + G
Sbjct: 167 GYGRSKWVAEKLV-REAGDRGLPVTIFRPGYITGD 200
|
Length = 382 |
| >gnl|CDD|187546 cd05235, SDR_e1, extended (e) SDRs, subgroup 1 | Back alignment and domain information |
|---|
Score = 43.8 bits (104), Expect = 3e-05
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Query: 6 VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCY 65
V+GTK ++ AA K++ + F S++ + + DD + LE N Y
Sbjct: 114 VLGTKELLKLAATGKLKPLHFVSTLSVFSAEEYNALDDEESD---DMLESQNGLPNGYIQ 170
Query: 66 GKAVAEKAAWEEAVARGVDLVVVNPVLVLG 95
K VAEK EA RG+ + ++ P + G
Sbjct: 171 SKWVAEKLL-REAANRGLPVAIIRPGNIFG 199
|
This family consists of an SDR module of multidomain proteins identified as putative polyketide sythases fatty acid synthases (FAS), and nonribosomal peptide synthases, among others. However, unlike the usual ketoreductase modules of FAS and polyketide synthase, these domains are related to the extended SDRs, and have canonical NAD(P)-binding motifs and an active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 290 |
| >gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 43.5 bits (103), Expect = 3e-05
Identities = 31/98 (31%), Positives = 44/98 (44%), Gaps = 19/98 (19%)
Query: 6 VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCY 65
V GT+NV+ A A A V RVV TSS AVY PD+ + + L
Sbjct: 87 VDGTQNVLDACAAAGVPRVVVTSS-VAVY---GAHPDNPAPLTEDAPLR--------GSP 134
Query: 66 GKA-VAEKAAWEEAVAR------GVDLVVVNPVLVLGP 96
A +KA E+ +A +++ V+ P +LGP
Sbjct: 135 EFAYSRDKAEVEQLLAEFRRRHPELNVTVLRPATILGP 172
|
Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306 |
| >gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 1e-04
Identities = 37/157 (23%), Positives = 58/157 (36%), Gaps = 22/157 (14%)
Query: 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKN 61
VE V GT NV+ AA +RVV TS+ VY P D + N
Sbjct: 92 VETNVFGTLNVLEAACVLYRKRVVHTST-SEVYGTAQDVPIDEDHPLLYI------NKPR 144
Query: 62 W-YCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQS-----TVNASIIH---ILKY 112
Y K A++ A+ + G+ + ++ P GP + T+ + ++
Sbjct: 145 SPYSASKQGADRLAYSYGRSFGLPVTIIRPFNTYGPRQSARAVIPTIISQRAIGQRLINL 204
Query: 113 LNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGR 149
+GS N V+D A I + + A G
Sbjct: 205 GDGSPTRDFN------FVKDTARGFIDILDAIEAVGE 235
|
Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316 |
| >gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 2e-04
Identities = 33/139 (23%), Positives = 58/139 (41%), Gaps = 17/139 (12%)
Query: 6 VIGTKNVIVAAAEAKVRRVVFTSSIGAVYM-DPNRSPDDVVDESCWSDLEFCKNTKNWYC 64
V GT+NV+ A V++ V+TSS ++ + D+ L + + Y
Sbjct: 91 VGGTQNVLDACQRCGVQKFVYTSSSSVIFGGQNIHNGDE--------TLPYPPLDSDMYA 142
Query: 65 YGKAVAEKAAWEEAVARGVDLVVVNPVLVLGP----LLQSTVNASIIHILKYLNGSAKTY 120
KA+AE E + + P + GP L+ + ++K++ G
Sbjct: 143 ETKAIAEIIVLEANGRDDLLTCALRPAGIFGPGDQGLVPILFEWAEKGLVKFVFGRGN-- 200
Query: 121 ANSVQAYVHVRDVALAHIL 139
N V + +V ++A AHIL
Sbjct: 201 -NLVD-FTYVHNLAHAHIL 217
|
Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331 |
| >gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 3e-04
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Query: 6 VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPN--RSPDD 43
V+ T NV+ A V+R+VF SS VY + +P+D
Sbjct: 95 VLATYNVLEAMRANGVKRIVFASS-STVYGEAKVIPTPED 133
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305 |
| >gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 4e-04
Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 24/143 (16%)
Query: 6 VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCY 65
V GT+NVI A + V+++V+TSS V+ N DES L + ++ Y
Sbjct: 91 VQGTRNVIEACRKCGVKKLVYTSSASVVF---NGQDIINGDES----LPYPDKHQDAYNE 143
Query: 66 GKAVAEKAAWEEAVARGVDLVVV--NPVLVLGP----LLQSTVNASIIHILKYLNGSAKT 119
KA+AEK +A L+ P + GP L+ + A NG K
Sbjct: 144 TKALAEKLVL-KANDPESGLLTCALRPAGIFGPGDRQLVPGLLKA-------AKNGKTKF 195
Query: 120 Y---ANSVQAYVHVRDVALAHIL 139
N++ + +V +VA AHIL
Sbjct: 196 QIGDGNNLFDFTYVENVAHAHIL 218
|
This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335 |
| >gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1 | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 6e-04
Identities = 34/142 (23%), Positives = 51/142 (35%), Gaps = 29/142 (20%)
Query: 20 KVRRVVFTSSIGAVYMDPNRSPDD--------VVDESCWSDLEFCKNTKNWYCYGKAVAE 71
+V++ +F SS +VY+ P R + V S D Y GK AE
Sbjct: 89 RVKQYIFISS-ASVYLKPGRVITESTPLREPDAVGLSDPWD----------YGRGKRAAE 137
Query: 72 KAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGS----AKTYANSVQAY 127
E A +V P + GP + A + G + VQ +
Sbjct: 138 DVLIEAAAFPYT---IVRPPYIYGPGDYTGRLA--YFFDRLARGRPILVPGDGHSLVQ-F 191
Query: 128 VHVRDVALAHILVYETPSASGR 149
+HV+D+A A + P A G
Sbjct: 192 IHVKDLARALLGAAGNPKAIGG 213
|
Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250 |
| >gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 7e-04
Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 9/91 (9%)
Query: 6 VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCY 65
T+ + AAA V+R VF SS+ V + DE ++ Y
Sbjct: 87 TELTRRLARAAARQGVKRFVFLSSV-KVNGEGT--VGAPFDE------TDPPAPQDAYGR 137
Query: 66 GKAVAEKAAWEEAVARGVDLVVVNPVLVLGP 96
K AE+A E + G+++V++ P +V GP
Sbjct: 138 SKLEAERALLELGASDGMEVVILRPPMVYGP 168
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303 |
| >gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein | Back alignment and domain information |
|---|
Score = 39.5 bits (93), Expect = 7e-04
Identities = 21/92 (22%), Positives = 36/92 (39%), Gaps = 7/92 (7%)
Query: 6 VIGTKNVIVAAAEAKVRRVVFTSS--IGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWY 63
V+GT+ V+ A + K S+ + +DE + L N Y
Sbjct: 110 VLGTREVLRLAKQMKKLPFHHVSTAYVNGERGGLLEEKPYKLDEDEPALLGGLPNG---Y 166
Query: 64 CYGKAVAEKAAWEEAVARGVDLVVVNPVLVLG 95
K +AE+ E A G+ +V+ P ++ G
Sbjct: 167 TQSKWLAEQLVREA--AGGLPVVIYRPSIITG 196
|
This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245 |
| >gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 39.1 bits (92), Expect = 0.001
Identities = 17/36 (47%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 6 VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSP 41
V+GT N++ AA +A V+R V+ SS +VY DP P
Sbjct: 94 VLGTLNLLEAARKAGVKRFVYASS-SSVYGDPPYLP 128
|
This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304 |
| >gnl|CDD|224011 COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 0.002
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 6 VIGTKNVIVAAAEAKVRRVVFTSSIGAVY 34
V+GT+NV AA + V++ V S+ AV
Sbjct: 353 VLGTENVAEAAIKNGVKKFVLISTDKAVN 381
|
Length = 588 |
| >gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5 | Back alignment and domain information |
|---|
Score = 37.6 bits (88), Expect = 0.002
Identities = 14/25 (56%), Positives = 17/25 (68%)
Query: 8 GTKNVIVAAAEAKVRRVVFTSSIGA 32
G N+I AA +A V+R V SSIGA
Sbjct: 88 GNINLIDAAKKAGVKRFVLVSSIGA 112
|
This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203 |
| >gnl|CDD|224012 COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 37.5 bits (88), Expect = 0.003
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 4/44 (9%)
Query: 6 VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESC 49
V+GT N+I A + V++ +F+S+ AVY +P SP + E+
Sbjct: 95 VVGTLNLIEAMLQTGVKKFIFSST-AAVYGEPTTSP---ISETS 134
|
Length = 329 |
| >gnl|CDD|217199 pfam02719, Polysacc_synt_2, Polysaccharide biosynthesis protein | Back alignment and domain information |
|---|
Score = 37.5 bits (88), Expect = 0.003
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 6 VIGTKNVIVAAAEAKVRRVVFTSSIGAVY 34
V+GT+NV AA E V + V S+ AV
Sbjct: 101 VLGTENVAEAAIENGVEKFVLISTDKAVN 129
|
This is a family of diverse bacterial polysaccharide biosynthesis proteins including the CapD protein, WalL protein mannosyl-transferase and several putative epimerases (e.g. WbiI). Length = 280 |
| >gnl|CDD|187558 cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 37.5 bits (88), Expect = 0.004
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 6 VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESC 49
V+GT N++ A V+ VF+SS AVY +P P + E
Sbjct: 97 VVGTLNLLEAMRAHGVKNFVFSSS-AAVYGEPETVP---ITEEA 136
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 323 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 239 | |||
| PLN02214 | 342 | cinnamoyl-CoA reductase | 100.0 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 100.0 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 100.0 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 100.0 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 100.0 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 100.0 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 100.0 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 100.0 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 100.0 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 100.0 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 100.0 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 100.0 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 100.0 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 100.0 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.98 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.97 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.97 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.97 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.97 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.97 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 99.97 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.97 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.97 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.97 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 99.97 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.97 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 99.97 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.97 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.97 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.97 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.97 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.96 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.96 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.96 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.96 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.96 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.95 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.95 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.95 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 99.95 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 99.95 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 99.94 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.93 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 99.93 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 99.92 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 99.91 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.9 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.9 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.89 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.85 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.85 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.84 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.84 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 99.82 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.81 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.8 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.77 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.76 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.74 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.73 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 99.7 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.68 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.67 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.64 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.6 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.54 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 99.53 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 99.52 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.5 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.48 | |
| KOG3019 | 315 | consensus Predicted nucleoside-diphosphate sugar e | 99.44 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 99.28 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.27 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.19 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.13 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.01 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.0 | |
| KOG4288 | 283 | consensus Predicted oxidoreductase [General functi | 99.0 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 98.99 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 98.97 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 98.95 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.95 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 98.9 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 98.89 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 98.87 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 98.85 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 98.84 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 98.83 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 98.82 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 98.81 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 98.77 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 98.77 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.75 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 98.74 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 98.69 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.67 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 98.67 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 98.64 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 98.63 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 98.63 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 98.63 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 98.61 | |
| PF13950 | 62 | Epimerase_Csub: UDP-glucose 4-epimerase C-term sub | 98.6 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 98.6 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 98.6 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 98.6 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 98.58 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.58 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 98.57 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 98.56 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 98.54 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 98.53 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.53 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 98.52 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 98.51 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 98.5 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 98.47 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 98.43 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 98.42 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 98.42 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 98.41 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 98.4 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 98.4 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 98.4 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.39 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 98.37 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 98.35 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 98.33 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 98.32 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 98.32 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 98.32 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 98.29 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.29 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 98.28 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 98.28 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 98.27 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 98.26 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 98.23 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 98.23 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 98.23 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 98.22 | |
| PRK05717 | 255 | oxidoreductase; Validated | 98.22 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.22 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.22 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 98.21 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 98.21 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 98.21 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 98.18 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 98.18 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 98.17 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 98.17 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 98.15 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 98.15 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 98.14 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 98.12 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 98.12 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 98.1 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 98.09 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 98.09 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 98.08 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 98.08 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.06 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 98.05 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 98.04 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 98.04 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.03 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.03 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 98.02 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 98.0 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 98.0 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 97.99 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 97.99 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 97.98 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 97.98 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 97.97 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 97.97 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 97.97 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 97.95 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 97.93 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 97.93 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 97.91 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 97.9 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 97.88 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 97.87 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 97.85 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 97.83 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 97.83 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 97.81 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 97.81 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 97.81 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 97.8 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 97.8 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 97.79 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 97.79 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 97.79 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 97.78 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 97.78 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.77 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 97.75 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 97.74 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 97.74 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 97.73 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 97.73 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 97.72 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 97.72 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 97.71 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 97.69 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 97.67 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 97.67 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 97.66 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 97.64 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 97.63 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 97.6 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 97.6 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 97.6 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 97.59 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 97.57 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 97.56 | |
| PRK08643 | 256 | acetoin reductase; Validated | 97.54 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 97.54 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 97.53 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 97.51 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 97.49 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 97.45 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 97.43 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 97.42 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 97.4 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 97.36 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 97.36 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 97.35 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 97.3 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 97.29 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 97.28 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.27 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.26 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 97.26 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 97.25 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 97.21 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 97.19 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 97.17 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 97.01 | |
| PLN00015 | 308 | protochlorophyllide reductase | 96.99 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 96.99 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 96.97 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.93 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 96.93 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 96.91 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.87 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 96.85 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.85 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.81 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 96.81 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.8 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 96.8 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.78 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 96.74 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.69 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 96.63 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 96.59 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 96.52 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 96.47 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 96.33 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 96.32 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 96.27 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 96.26 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.21 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.11 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 96.03 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 95.99 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 95.97 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.73 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 95.55 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 95.47 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 95.36 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.14 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 94.97 | |
| PF08732 | 410 | HIM1: HIM1; InterPro: IPR014843 HIM1 (high inducti | 94.89 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 94.8 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 94.71 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 94.57 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 94.52 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 94.44 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 94.21 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 94.12 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 93.44 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 93.32 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 93.14 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 93.08 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 92.93 | |
| KOG1204 | 253 | consensus Predicted dehydrogenase [Secondary metab | 92.4 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 90.46 | |
| PLN00106 | 323 | malate dehydrogenase | 88.75 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 83.94 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 80.68 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 80.46 |
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-38 Score=255.03 Aligned_cols=227 Identities=80% Similarity=1.247 Sum_probs=181.6
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+++|+.++.+++++|++.++++|||+||.+++|+.....+..+++|+++.....+..|.+.|+.+|.++|++++.+.++.
T Consensus 100 ~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~ 179 (342)
T PLN02214 100 VEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEK 179 (342)
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHHHHHHHHHHHHHHHHHHc
Confidence 57899999999999999999999999996579975443222357888765443334577899999999999999998888
Q ss_pred CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCceEEEecCCCCHHH
Q 026418 82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGE 161 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~~~~~s~~e 161 (239)
+++++++||+++|||+..+........+..++.+....++++.++||||+|+|++++++++++..+++||+++..+++.|
T Consensus 180 g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~V~Dva~a~~~al~~~~~~g~yn~~~~~~~~~e 259 (342)
T PLN02214 180 GVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVLVYEAPSASGRYLLAESARHRGE 259 (342)
T ss_pred CCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccCCCCCcCeeEHHHHHHHHHHHHhCcccCCcEEEecCCCCHHH
Confidence 99999999999999986543222223334566676666777789999999999999999987665669988877899999
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCCCCCCCcccChHHHHhhCCceeCHHHHHHHHHHHHHHcCCCCCCc
Q 026418 162 VVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKDLGLEFTPVKQCLYETVKSLQEKGHLPIPT 228 (239)
Q Consensus 162 l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~p~~~~e~i~~~~~~~~~~g~~~~~~ 228 (239)
+++.+.+.+|...++...............+|++|+++|||+|++++|+|+++++|+++.|.++.++
T Consensus 260 l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~LG~~p~~lee~i~~~~~~~~~~~~~~~~~ 326 (342)
T PLN02214 260 VVEILAKLFPEYPLPTKCKDEKNPRAKPYKFTNQKIKDLGLEFTSTKQSLYDTVKSLQEKGHLAPPP 326 (342)
T ss_pred HHHHHHHHCCCCCCCCCCccccCCCCCccccCcHHHHHcCCcccCHHHHHHHHHHHHHHcCCCCCCC
Confidence 9999999987655555443323334455678999998899999999999999999999999986654
|
|
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-38 Score=237.53 Aligned_cols=208 Identities=22% Similarity=0.266 Sum_probs=176.4
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
++-|+.||.+|+++|+++++++|||.|| +++||.+... |++|+.+. .|.++||+||++.|++++.+++..
T Consensus 91 y~NNv~gTl~Ll~am~~~gv~~~vFSSt-AavYG~p~~~---PI~E~~~~------~p~NPYG~sKlm~E~iL~d~~~a~ 160 (329)
T COG1087 91 YDNNVVGTLNLIEAMLQTGVKKFIFSST-AAVYGEPTTS---PISETSPL------APINPYGRSKLMSEEILRDAAKAN 160 (329)
T ss_pred HhhchHhHHHHHHHHHHhCCCEEEEecc-hhhcCCCCCc---ccCCCCCC------CCCCcchhHHHHHHHHHHHHHHhC
Confidence 6789999999999999999999999999 6999998876 99999984 678999999999999999999999
Q ss_pred CccEEEEecCcccCCCCCC-------CCChhHHHHHHHHcCCCC---cc--------CCCCCCceehHHHHHHHHHhhcC
Q 026418 82 GVDLVVVNPVLVLGPLLQS-------TVNASIIHILKYLNGSAK---TY--------ANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~-------~~~~~~~~~~~~~~~~~~---~~--------~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
++++++||.+++.|....+ ....+...+....-|+.. ++ |.+.||||||.|+|++++++++.
T Consensus 161 ~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DLA~aH~~Al~~ 240 (329)
T COG1087 161 PFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDLADAHVLALKY 240 (329)
T ss_pred CCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHHHHHHHHHHHH
Confidence 9999999999999954321 122222333333334332 12 34679999999999999999976
Q ss_pred CCCCc---eEEEe-cCCCCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcccChHHHHh-hCCce-e-CHHHHHHHHHH
Q 026418 144 PSASG---RYLCA-ESVLHRGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKD-LGLEF-T-PVKQCLYETVK 216 (239)
Q Consensus 144 ~~~~~---~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p-~-~~~e~i~~~~~ 216 (239)
-..+| +||++ |...|+.|+++++.+.. +.++|..+.+.+..++..++.|.+|+++ |||+| + ++++.++++..
T Consensus 241 L~~~g~~~~~NLG~G~G~SV~evi~a~~~vt-g~~ip~~~~~RR~GDpa~l~Ad~~kA~~~Lgw~p~~~~L~~ii~~aw~ 319 (329)
T COG1087 241 LKEGGSNNIFNLGSGNGFSVLEVIEAAKKVT-GRDIPVEIAPRRAGDPAILVADSSKARQILGWQPTYDDLEDIIKDAWD 319 (329)
T ss_pred HHhCCceeEEEccCCCceeHHHHHHHHHHHh-CCcCceeeCCCCCCCCceeEeCHHHHHHHhCCCcccCCHHHHHHHHHH
Confidence 43333 89998 99999999999999995 8999999999999999999999999977 99999 6 99999999999
Q ss_pred HHHH
Q 026418 217 SLQE 220 (239)
Q Consensus 217 ~~~~ 220 (239)
|...
T Consensus 320 W~~~ 323 (329)
T COG1087 320 WHQQ 323 (329)
T ss_pred Hhhh
Confidence 9973
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-36 Score=226.21 Aligned_cols=218 Identities=19% Similarity=0.208 Sum_probs=183.6
Q ss_pred CchhHhHHHHHHHHHHHhcCC-CEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 1 MVEPAVIGTKNVIVAAAEAKV-RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 1 ~~~~Nv~~t~~ll~a~~~~~v-~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
++++||.||.+||+|+++... -||+|+|| ..|||+..... ..++|++| ..|.+||+.||+.++.+++.|.+
T Consensus 97 Fi~TNv~GT~~LLEaar~~~~~frf~HIST-DEVYG~l~~~~-~~FtE~tp------~~PsSPYSASKAasD~lVray~~ 168 (340)
T COG1088 97 FIQTNVVGTYTLLEAARKYWGKFRFHHIST-DEVYGDLGLDD-DAFTETTP------YNPSSPYSASKAASDLLVRAYVR 168 (340)
T ss_pred hhhcchHHHHHHHHHHHHhcccceEEEecc-ccccccccCCC-CCcccCCC------CCCCCCcchhhhhHHHHHHHHHH
Confidence 578999999999999999984 38999999 69999876431 25788887 57799999999999999999999
Q ss_pred HcCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCc-cCC--CCCCceehHHHHHHHHHhhcCCCCCceEEEe-cC
Q 026418 80 ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKT-YAN--SVQAYVHVRDVALAHILVYETPSASGRYLCA-ES 155 (239)
Q Consensus 80 ~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~ 155 (239)
.+|++++|.|+++-|||...+. ..++..+..++.|+++. +|+ +.+||+||+|-++++..++.+...+.+||++ +.
T Consensus 169 TYglp~~ItrcSNNYGPyqfpE-KlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~kg~~GE~YNIgg~~ 247 (340)
T COG1088 169 TYGLPATITRCSNNYGPYQFPE-KLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLTKGKIGETYNIGGGN 247 (340)
T ss_pred HcCCceEEecCCCCcCCCcCch-hhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHHhcCcCCceEEeCCCc
Confidence 9999999999999999986654 24455667777787765 665 5789999999999999999988776699988 67
Q ss_pred CCCHHHHHHHHHHhCCCCCCC-----CCCCCCCCCCCCCcccChHHH-HhhCCce-eCHHHHHHHHHHHHHHcCCCCCCc
Q 026418 156 VLHRGEVVEILAKFFPEYPIP-----TKCSDEKNPRKKPYKFSNQKL-KDLGLEF-TPVKQCLYETVKSLQEKGHLPIPT 228 (239)
Q Consensus 156 ~~s~~el~~~i~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~k~-~~lg~~p-~~~~e~i~~~~~~~~~~g~~~~~~ 228 (239)
..+-.|+++.|.+.+ +...+ +....++..-...+.+|.+|+ ++|||+| .+++++|+++++||+++..+=.|.
T Consensus 248 E~~Nlevv~~i~~~l-~~~~~~~~~li~~V~DRpGHD~RYaid~~Ki~~eLgW~P~~~fe~GlrkTv~WY~~N~~Ww~~l 326 (340)
T COG1088 248 ERTNLEVVKTICELL-GKDKPDYRDLITFVEDRPGHDRRYAIDASKIKRELGWRPQETFETGLRKTVDWYLDNEWWWEPL 326 (340)
T ss_pred cchHHHHHHHHHHHh-CccccchhhheEeccCCCCCccceeechHHHhhhcCCCcCCCHHHHHHHHHHHHHhchHHHhhh
Confidence 889999999999998 55444 455666777778899999997 5699999 999999999999999886655444
|
|
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=225.26 Aligned_cols=225 Identities=50% Similarity=0.843 Sum_probs=199.0
Q ss_pred CchhHhHHHHHHHHHHHhcC-CCEEEEccchhhhccC-CCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHH
Q 026418 1 MVEPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMD-PNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA 78 (239)
Q Consensus 1 ~~~~Nv~~t~~ll~a~~~~~-v~~~i~~Ss~~~vy~~-~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~ 78 (239)
++++++.||+|+|++|++.. |+|+|++||++++... .+..+...++|+.|.+.+.+......|..+|..+|+..++++
T Consensus 100 li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa 179 (327)
T KOG1502|consen 100 LIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKLWYALSKTLAEKAAWEFA 179 (327)
T ss_pred hhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 46789999999999999999 9999999999888765 333355689999999998876667899999999999999999
Q ss_pred HHcCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCceEEEecCCCC
Q 026418 79 VARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLH 158 (239)
Q Consensus 79 ~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~~~~~s 158 (239)
.+.+++.+++-|+.|+||...+..+.....+.++++|....+.+....||||+|||++++.+++.+...|+|+|.++..+
T Consensus 180 ~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~~~~~VdVrDVA~AHv~a~E~~~a~GRyic~~~~~~ 259 (327)
T KOG1502|consen 180 KENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNFWLAFVDVRDVALAHVLALEKPSAKGRYICVGEVVS 259 (327)
T ss_pred HhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCCceeeEeHHHHHHHHHHHHcCcccCceEEEecCccc
Confidence 99999999999999999998887777778889999998877877777899999999999999999999999999998888
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcccChHHHHhhC-CceeCHHHHHHHHHHHHHHcCCCC
Q 026418 159 RGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKDLG-LEFTPVKQCLYETVKSLQEKGHLP 225 (239)
Q Consensus 159 ~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg-~~p~~~~e~i~~~~~~~~~~g~~~ 225 (239)
+.|+++.+.+.+|..++|...............++++|+++|| +++++++|++.++++++++.|++.
T Consensus 260 ~~ei~~~l~~~~P~~~ip~~~~~~~~~~~~~~~~~~~k~k~lg~~~~~~l~e~~~dt~~sl~~~~~l~ 327 (327)
T KOG1502|consen 260 IKEIADILRELFPDYPIPKKNAEEHEGFLTSFKVSSEKLKSLGGFKFRPLEETLSDTVESLREKGLLL 327 (327)
T ss_pred HHHHHHHHHHhCCCCCCCCCCCccccccccccccccHHHHhcccceecChHHHHHHHHHHHHHhcCCC
Confidence 9999999999999888777666654455555678999999987 888999999999999999998863
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-34 Score=232.29 Aligned_cols=220 Identities=43% Similarity=0.720 Sum_probs=170.1
Q ss_pred chhHhHHHHHHHHHHHhc-CCCEEEEccchhhh--ccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA-KVRRVVFTSSIGAV--YMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA 78 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~-~v~~~i~~Ss~~~v--y~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~ 78 (239)
+++|+.|+.+++++|++. ++++|||+||. +. |+.....+..+++|+++..+..+..+.+.|+.+|..+|++++++.
T Consensus 100 ~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~-~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~ 178 (322)
T PLN02986 100 IDPALKGTINVLNTCKETPSVKRVILTSST-AAVLFRQPPIEANDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEFA 178 (322)
T ss_pred hHHHHHHHHHHHHHHHhcCCccEEEEecch-hheecCCccCCCCCCcCcccCCChHHhhccccchHHHHHHHHHHHHHHH
Confidence 578999999999999986 68999999996 54 343221122357888775543333456889999999999999999
Q ss_pred HHcCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCceEEEecCCCC
Q 026418 79 VARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLH 158 (239)
Q Consensus 79 ~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~~~~~s 158 (239)
++.+++++++||+++|||...+........+..++.+... ++...++|||++|+|++++.++.++...++||++++.+|
T Consensus 179 ~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~v~v~Dva~a~~~al~~~~~~~~yni~~~~~s 257 (322)
T PLN02986 179 KDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNL-FNNRFYRFVDVRDVALAHIKALETPSANGRYIIDGPIMS 257 (322)
T ss_pred HHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCC-CCCcCcceeEHHHHHHHHHHHhcCcccCCcEEEecCCCC
Confidence 8889999999999999998654333334556667777653 566678999999999999999987766669999888899
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcccChHHHHhhCCceeCHHHHHHHHHHHHHHcCCC
Q 026418 159 RGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKDLGLEFTPVKQCLYETVKSLQEKGHL 224 (239)
Q Consensus 159 ~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~p~~~~e~i~~~~~~~~~~g~~ 224 (239)
+.|+++.+.+.+|+..++..... .........+|++|+++|||+|++++|+|.++++|+++.|++
T Consensus 258 ~~e~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~lg~~~~~l~e~~~~~~~~~~~~~~~ 322 (322)
T PLN02986 258 VNDIIDILRELFPDLCIADTNEE-SEMNEMICKVCVEKVKNLGVEFTPMKSSLRDTILSLKEKCLL 322 (322)
T ss_pred HHHHHHHHHHHCCCCCCCCCCcc-ccccccCCccCHHHHHHcCCcccCHHHHHHHHHHHHHHcCCC
Confidence 99999999999976554432111 111111224899999889999999999999999999998875
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-34 Score=229.27 Aligned_cols=221 Identities=48% Similarity=0.807 Sum_probs=170.5
Q ss_pred chhHhHHHHHHHHHHHhc-CCCEEEEccchhh-hccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA-KVRRVVFTSSIGA-VYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~-~v~~~i~~Ss~~~-vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++.+++++|.+. ++++|||+||+++ +|+.....+..+++|+.+..+..+....+.|+.+|..+|++++.+.+
T Consensus 99 ~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~ 178 (322)
T PLN02662 99 IDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAK 178 (322)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcccchHHHHHHHHHHHHHHHHH
Confidence 578999999999999988 7999999999633 46532211223578876654432222346899999999999999988
Q ss_pred HcCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCceEEEecCCCCH
Q 026418 80 ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHR 159 (239)
Q Consensus 80 ~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~~~~~s~ 159 (239)
+.+++++++||+++|||...+........+..++.+.. .++++.++|+|++|+|++++.++..+...+.||+++..+|+
T Consensus 179 ~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~g~~~s~ 257 (322)
T PLN02662 179 ENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQ-TFPNASYRWVDVRDVANAHIQAFEIPSASGRYCLVERVVHY 257 (322)
T ss_pred HcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCc-cCCCCCcCeEEHHHHHHHHHHHhcCcCcCCcEEEeCCCCCH
Confidence 88999999999999999865433333344566666554 34667899999999999999999876555688888889999
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcccChHHHHhhCCceeCHHHHHHHHHHHHHHcCCC
Q 026418 160 GEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKDLGLEFTPVKQCLYETVKSLQEKGHL 224 (239)
Q Consensus 160 ~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~p~~~~e~i~~~~~~~~~~g~~ 224 (239)
+|+++.+.+.++...++....+. ........+|++|+++|||++++++++|+++++|++++|.+
T Consensus 258 ~e~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~d~~k~~~lg~~~~~~~~~l~~~~~~~~~~~~~ 321 (322)
T PLN02662 258 SEVVKILHELYPTLQLPEKCADD-KPYVPTYQVSKEKAKSLGIEFIPLEVSLKDTVESLKEKGFL 321 (322)
T ss_pred HHHHHHHHHHCCCCCCCCCCCCc-cccccccccChHHHHHhCCccccHHHHHHHHHHHHHHcCCC
Confidence 99999999997654444333221 22445678999999889999999999999999999999886
|
|
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=217.39 Aligned_cols=209 Identities=21% Similarity=0.256 Sum_probs=165.3
Q ss_pred chhHhHHHHHHHHHHHhcC-CCEEEEccchhhhccCCCCCCCcccc-CCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVD-ESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~-v~~~i~~Ss~~~vy~~~~~~~~~~~~-E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+..|+.+|..|+++++..| +++|||+|| ..|||+.+.. ... |.+. +.|.++|+.+|+++|.+++.|.+
T Consensus 104 ~~nnil~t~~Lle~~~~sg~i~~fvhvST-deVYGds~~~---~~~~E~s~------~nPtnpyAasKaAaE~~v~Sy~~ 173 (331)
T KOG0747|consen 104 TKNNILSTHVLLEAVRVSGNIRRFVHVST-DEVYGDSDED---AVVGEASL------LNPTNPYAASKAAAEMLVRSYGR 173 (331)
T ss_pred hcCCchhhhhHHHHHHhccCeeEEEEecc-cceecCcccc---cccccccc------CCCCCchHHHHHHHHHHHHHHhh
Confidence 4579999999999999996 999999999 5999998765 333 6655 57899999999999999999999
Q ss_pred HcCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCC-ccCC--CCCCceehHHHHHHHHHhhcCCCCCceEEEe-cC
Q 026418 80 ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAK-TYAN--SVQAYVHVRDVALAHILVYETPSASGRYLCA-ES 155 (239)
Q Consensus 80 ~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~ 155 (239)
+.|++++++|.++||||+..+.- .+..++.-..++++. ..|+ ..++|+||+|+++++.+++.....+.+||++ ..
T Consensus 174 sy~lpvv~~R~nnVYGP~q~~~k-lipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~Kg~~geIYNIgtd~ 252 (331)
T KOG0747|consen 174 SYGLPVVTTRMNNVYGPNQYPEK-LIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLEKGELGEIYNIGTDD 252 (331)
T ss_pred ccCCcEEEEeccCccCCCcChHH-HhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHHhcCCccceeeccCcc
Confidence 99999999999999999865432 223344434445544 3555 4678999999999999999875555599998 78
Q ss_pred CCCHHHHHHHHHHhC----CCCCCCCC--CCCCCCCCCCCcccChHHHHhhCCce-eCHHHHHHHHHHHHHHc
Q 026418 156 VLHRGEVVEILAKFF----PEYPIPTK--CSDEKNPRKKPYKFSNQKLKDLGLEF-TPVKQCLYETVKSLQEK 221 (239)
Q Consensus 156 ~~s~~el~~~i~~~~----~~~~~~~~--~~~~~~~~~~~~~~~~~k~~~lg~~p-~~~~e~i~~~~~~~~~~ 221 (239)
+++..|+++.+.+.+ +....+.. ..+.+......+.++.+|+|.|||+| ++++++|+++++|+.+.
T Consensus 253 e~~~~~l~k~i~eli~~~~~~~~~~p~~~~v~dRp~nd~Ry~~~~eKik~LGw~~~~p~~eGLrktie~y~~~ 325 (331)
T KOG0747|consen 253 EMRVIDLAKDICELFEKRLPNIDTEPFIFFVEDRPYNDLRYFLDDEKIKKLGWRPTTPWEEGLRKTIEWYTKN 325 (331)
T ss_pred hhhHHHHHHHHHHHHHHhccCCCCCCcceecCCCCcccccccccHHHHHhcCCcccCcHHHHHHHHHHHHHhh
Confidence 899999999888775 22221111 12233334456899999999999999 99999999999999754
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-34 Score=231.85 Aligned_cols=210 Identities=19% Similarity=0.119 Sum_probs=163.7
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+++|+.||.||+++|++.++++|||+|| .++||..... +..|+++ ..|.++|+.+|..+|.+++.+.++.
T Consensus 114 ~~~Nv~gt~nll~~~~~~~~~~~v~~SS-~~vyg~~~~~---~~~e~~~------~~p~~~Y~~sK~~~e~~~~~~~~~~ 183 (348)
T PRK15181 114 NSANIDGFLNMLTAARDAHVSSFTYAAS-SSTYGDHPDL---PKIEERI------GRPLSPYAVTKYVNELYADVFARSY 183 (348)
T ss_pred HHHHHHHHHHHHHHHHHcCCCeEEEeec-hHhhCCCCCC---CCCCCCC------CCCCChhhHHHHHHHHHHHHHHHHh
Confidence 4689999999999999999999999999 5999865443 5666654 2467899999999999999998888
Q ss_pred CccEEEEecCcccCCCCCCCC---ChhHHHHHHHHcCCCCc-cCC--CCCCceehHHHHHHHHHhhcCCC---CCceEEE
Q 026418 82 GVDLVVVNPVLVLGPLLQSTV---NASIIHILKYLNGSAKT-YAN--SVQAYVHVRDVALAHILVYETPS---ASGRYLC 152 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~-~~~--~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~ 152 (239)
+++++++||+++|||+..+.. .....++.+++.++++. +++ ..++|+|++|+|+++++++.... .+++||+
T Consensus 184 ~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~yni 263 (348)
T PRK15181 184 EFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKNKVYNV 263 (348)
T ss_pred CCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhcccccCCCCEEEe
Confidence 999999999999999865432 23345566777777655 454 46899999999999998775432 3359998
Q ss_pred e-cCCCCHHHHHHHHHHhCCCCC-----CCCCCCCCCCCCCCCcccChHHHHh-hCCce-eCHHHHHHHHHHHHHHc
Q 026418 153 A-ESVLHRGEVVEILAKFFPEYP-----IPTKCSDEKNPRKKPYKFSNQKLKD-LGLEF-TPVKQCLYETVKSLQEK 221 (239)
Q Consensus 153 ~-~~~~s~~el~~~i~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p-~~~~e~i~~~~~~~~~~ 221 (239)
+ ++++|++|+++.+.+.++... .................+|++|+++ |||+| ++++|+|+++++|++++
T Consensus 264 ~~g~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lGw~P~~sl~egl~~~~~w~~~~ 340 (348)
T PRK15181 264 AVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDK 340 (348)
T ss_pred cCCCcEeHHHHHHHHHHHhCcccccccCCCcccCCCCCCcccccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence 7 789999999999998874211 1111222223344567889999976 89999 89999999999999754
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-33 Score=224.05 Aligned_cols=220 Identities=39% Similarity=0.654 Sum_probs=167.8
Q ss_pred chhHhHHHHHHHHHHHhc-CCCEEEEccchhhhccCCCC--CCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA-KVRRVVFTSSIGAVYMDPNR--SPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA 78 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~-~v~~~i~~Ss~~~vy~~~~~--~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~ 78 (239)
+++|+.++.+++++|.+. ++++||++||. +.|+.... .+..+++|+++..+.....+.++|+.+|..+|++++.+.
T Consensus 101 ~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~-~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~ 179 (325)
T PLN02989 101 INPAVNGTINVLRTCTKVSSVKRVILTSSM-AAVLAPETKLGPNDVVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFA 179 (325)
T ss_pred HHHHHHHHHHHHHHHHHcCCceEEEEecch-hheecCCccCCCCCccCcCCCCchhHhcccccchHHHHHHHHHHHHHHH
Confidence 578999999999999986 47899999996 55543221 122367888876554322345789999999999999998
Q ss_pred HHcCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCceEEEecCCCC
Q 026418 79 VARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLH 158 (239)
Q Consensus 79 ~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~~~~~s 158 (239)
++.+++++++||+++|||+..+........+..++.++.+ ++...++|+|++|+|++++.++.++...++||+++..+|
T Consensus 180 ~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~-~~~~~r~~i~v~Dva~a~~~~l~~~~~~~~~ni~~~~~s 258 (325)
T PLN02989 180 KDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNP-FNTTHHRFVDVRDVALAHVKALETPSANGRYIIDGPVVT 258 (325)
T ss_pred HHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCC-CCCcCcCeeEHHHHHHHHHHHhcCcccCceEEEecCCCC
Confidence 8889999999999999998765333333456667776654 344568999999999999999987655569999988999
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcccChHHHHhhCCce-eCHHHHHHHHHHHHHHcCC
Q 026418 159 RGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKDLGLEF-TPVKQCLYETVKSLQEKGH 223 (239)
Q Consensus 159 ~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~p-~~~~e~i~~~~~~~~~~g~ 223 (239)
++|+++.+.+.+|...++................|++|+++|||.| ++++++|+++++|++..|+
T Consensus 259 ~~ei~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~p~~~l~~gi~~~~~~~~~~~~ 324 (325)
T PLN02989 259 IKDIENVLREFFPDLCIADRNEDITELNSVTFNVCLDKVKSLGIIEFTPTETSLRDTVLSLKEKCL 324 (325)
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCcccccccCcCCCHHHHHHcCCCCCCCHHHHHHHHHHHHHHhCC
Confidence 9999999999986443321111111112235688999998899999 9999999999999988775
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-31 Score=218.79 Aligned_cols=223 Identities=35% Similarity=0.663 Sum_probs=162.8
Q ss_pred chhHhHHHHHHHHHHHhcC-CCEEEEccchhhhccCCCCCCCccccCCCCCChhh---cccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEF---CKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~---~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.+|+++|.+++ +++|||+||. ++|+..... ...++|+.+...+. +..+.++|+.+|..+|.+++.+
T Consensus 100 ~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~-~~~~~~~~~-~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 177 (351)
T PLN02650 100 IKPTVNGMLSIMKACAKAKTVRRIVFTSSA-GTVNVEEHQ-KPVYDEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKY 177 (351)
T ss_pred hhHHHHHHHHHHHHHHhcCCceEEEEecch-hhcccCCCC-CCccCcccCCchhhhhccccccchHHHHHHHHHHHHHHH
Confidence 5789999999999999987 8899999995 555433211 11256664422111 1234568999999999999999
Q ss_pred HHHcCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccC-CCCCCceehHHHHHHHHHhhcCCCCCceEEEecCC
Q 026418 78 AVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYA-NSVQAYVHVRDVALAHILVYETPSASGRYLCAESV 156 (239)
Q Consensus 78 ~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~~~~ 156 (239)
++++|++++++||+++|||+.................+....++ .+.++|+||+|+|++++.+++++...++|++++..
T Consensus 178 ~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~v~V~Dva~a~~~~l~~~~~~~~~i~~~~~ 257 (351)
T PLN02650 178 AAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAHYSIIKQGQFVHLDDLCNAHIFLFEHPAAEGRYICSSHD 257 (351)
T ss_pred HHHcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCccccCcCCCcceeeHHHHHHHHHHHhcCcCcCceEEecCCC
Confidence 98899999999999999997643221111111122334333232 23579999999999999999876555688877888
Q ss_pred CCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcccChHHHHhhCCce-eCHHHHHHHHHHHHHHcCCCCCC
Q 026418 157 LHRGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKDLGLEF-TPVKQCLYETVKSLQEKGHLPIP 227 (239)
Q Consensus 157 ~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~p-~~~~e~i~~~~~~~~~~g~~~~~ 227 (239)
+|+.|+++.+.+.++...++..... ..........|++|+++|||+| ++++++|+++++|+++.+.+++.
T Consensus 258 ~s~~el~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~d~~k~~~lG~~p~~~l~egl~~~i~~~~~~~~~~~~ 328 (351)
T PLN02650 258 ATIHDLAKMLREKYPEYNIPARFPG-IDEDLKSVEFSSKKLTDLGFTFKYSLEDMFDGAIETCREKGLIPLS 328 (351)
T ss_pred cCHHHHHHHHHHhCcccCCCCCCCC-cCcccccccCChHHHHHhCCCCCCCHHHHHHHHHHHHHHcCCCCcc
Confidence 9999999999998765444433322 1223445667889988899999 89999999999999999998663
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-31 Score=218.25 Aligned_cols=221 Identities=34% Similarity=0.506 Sum_probs=165.4
Q ss_pred chhHhHHHHHHHHHHHhc-CCCEEEEccchhhhccCCCC-CCCccccCCCCCCh---hhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA-KVRRVVFTSSIGAVYMDPNR-SPDDVVDESCWSDL---EFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~-~v~~~i~~Ss~~~vy~~~~~-~~~~~~~E~~~~~~---~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++.+|+++|.+. ++++|||+||. ++|+.... .+..+++|+.+... .....|.++|+.||.++|.+++.
T Consensus 103 ~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~-~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~ 181 (338)
T PLN00198 103 IKPAIQGVHNVLKACAKAKSVKRVILTSSA-AAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWK 181 (338)
T ss_pred HHHHHHHHHHHHHHHHhcCCccEEEEeecc-eeeeccCCCCCCceeccccCCchhhhhhcCCccchhHHHHHHHHHHHHH
Confidence 468999999999999887 48999999994 88875321 11125666543211 01124678899999999999999
Q ss_pred HHHHcCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCc-cC-------CCCCCceehHHHHHHHHHhhcCCCCCc
Q 026418 77 EAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKT-YA-------NSVQAYVHVRDVALAHILVYETPSASG 148 (239)
Q Consensus 77 ~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~-------~~~~~~i~v~D~a~~~~~~~~~~~~~~ 148 (239)
++++.+++++++||+++|||+...........+.+++.++... .+ ++.++|+||+|+|++++.++......+
T Consensus 182 ~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~~~~~~ 261 (338)
T PLN00198 182 FAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSISITHVEDVCRAHIFLAEKESASG 261 (338)
T ss_pred HHHhcCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccccccccccccCCcceeEHHHHHHHHHHHhhCcCcCC
Confidence 9988899999999999999986433222222344556665432 22 234799999999999999998765556
Q ss_pred eEEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcccChHHHHhhCCce-eCHHHHHHHHHHHHHHcCCCC
Q 026418 149 RYLCAESVLHRGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKDLGLEF-TPVKQCLYETVKSLQEKGHLP 225 (239)
Q Consensus 149 ~y~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~p-~~~~e~i~~~~~~~~~~g~~~ 225 (239)
+|++++..+++.|+++.+.+.++...++...... .......+|++|++++||+| ++++++|+++++|++++|+++
T Consensus 262 ~~~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~k~~~~G~~p~~~l~~gi~~~~~~~~~~~~~~ 337 (338)
T PLN00198 262 RYICCAANTSVPELAKFLIKRYPQYQVPTDFGDF--PSKAKLIISSEKLISEGFSFEYGIEEIYDQTVEYFKAKGLLK 337 (338)
T ss_pred cEEEecCCCCHHHHHHHHHHHCCCCCCCcccccc--CCCCccccChHHHHhCCceecCcHHHHHHHHHHHHHHcCCCC
Confidence 8887788899999999999987654444433221 12345678999998899999 899999999999999999875
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-32 Score=225.78 Aligned_cols=212 Identities=18% Similarity=0.248 Sum_probs=166.8
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+++|+.||.+|+++|+++++ +|||+|| .++||+.... +.+|+.+... .+..|.+.|+.+|..+|++++.+.++.
T Consensus 208 ~~~Nv~gT~nLleaa~~~g~-r~V~~SS-~~VYg~~~~~---p~~E~~~~~~-~p~~p~s~Yg~SK~~aE~~~~~y~~~~ 281 (436)
T PLN02166 208 IKTNVMGTLNMLGLAKRVGA-RFLLTST-SEVYGDPLEH---PQKETYWGNV-NPIGERSCYDEGKRTAETLAMDYHRGA 281 (436)
T ss_pred HHHHHHHHHHHHHHHHHhCC-EEEEECc-HHHhCCCCCC---CCCccccccC-CCCCCCCchHHHHHHHHHHHHHHHHHh
Confidence 56899999999999999985 8999999 5999876544 6777643221 123567889999999999999999888
Q ss_pred CccEEEEecCcccCCCCCCC-CChhHHHHHHHHcCCCCc-cCC--CCCCceehHHHHHHHHHhhcCCCCCceEEEe-cCC
Q 026418 82 GVDLVVVNPVLVLGPLLQST-VNASIIHILKYLNGSAKT-YAN--SVQAYVHVRDVALAHILVYETPSASGRYLCA-ESV 156 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~-~~~--~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~ 156 (239)
+++++++||+++|||+.... ......++.++++++++. +++ ..++|+||+|++++++.+++.. ..++||++ ++.
T Consensus 282 ~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~~~~-~~giyNIgs~~~ 360 (436)
T PLN02166 282 GVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALMEGE-HVGPFNLGNPGE 360 (436)
T ss_pred CCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhcC-CCceEEeCCCCc
Confidence 99999999999999985432 223345677788877765 454 4689999999999999998754 34699887 788
Q ss_pred CCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcccChHHHHh-hCCce-eCHHHHHHHHHHHHHHc
Q 026418 157 LHRGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKD-LGLEF-TPVKQCLYETVKSLQEK 221 (239)
Q Consensus 157 ~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p-~~~~e~i~~~~~~~~~~ 221 (239)
+|++|+++.+.+.+ +.+......+..........+|++|+++ |||+| ++++++|+++++|++..
T Consensus 361 ~Si~ela~~I~~~~-g~~~~i~~~p~~~~~~~~~~~d~~Ka~~~LGw~P~~sl~egl~~~i~~~~~~ 426 (436)
T PLN02166 361 FTMLELAEVVKETI-DSSATIEFKPNTADDPHKRKPDISKAKELLNWEPKISLREGLPLMVSDFRNR 426 (436)
T ss_pred EeHHHHHHHHHHHh-CCCCCeeeCCCCCCCccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHH
Confidence 99999999999997 4433333333333344567889999987 89999 99999999999999653
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-31 Score=214.78 Aligned_cols=223 Identities=33% Similarity=0.546 Sum_probs=160.5
Q ss_pred chhHhHHHHHHHHHHHhcC-CCEEEEccchhhhccCCCCC--CCccccCCCCCChh--h-cccCCchHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRS--PDDVVDESCWSDLE--F-CKNTKNWYCYGKAVAEKAAW 75 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~-v~~~i~~Ss~~~vy~~~~~~--~~~~~~E~~~~~~~--~-~~~~~~~Y~~sK~~~E~~~~ 75 (239)
++.|+.++.+|+++|++.+ +++||++|| .++||..... ...+++|+.+...+ . +..+.++|+.||.++|++++
T Consensus 110 ~~~~~~g~~~ll~~~~~~~~~~~~v~~SS-~~vyg~~~~~~~~~~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~ 188 (353)
T PLN02896 110 IDPAIKGTLNVLKSCLKSKTVKRVVFTSS-ISTLTAKDSNGRWRAVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAF 188 (353)
T ss_pred HHHHHHHHHHHHHHHHhcCCccEEEEEec-hhhccccccCCCCCCccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHH
Confidence 3456799999999999886 889999999 5999854311 11256776332111 0 11245689999999999999
Q ss_pred HHHHHcCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccC--------CCCCCceehHHHHHHHHHhhcCCCCC
Q 026418 76 EEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYA--------NSVQAYVHVRDVALAHILVYETPSAS 147 (239)
Q Consensus 76 ~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~i~v~D~a~~~~~~~~~~~~~ 147 (239)
.+++..+++++++||+++|||+..+........+.....|....++ .+.++|||++|+|++++.++..+...
T Consensus 189 ~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~dfi~v~Dva~a~~~~l~~~~~~ 268 (353)
T PLN02896 189 KYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAVNSRMGSIALVHIEDICDAHIFLMEQTKAE 268 (353)
T ss_pred HHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCccccccccccccccCceeEEeHHHHHHHHHHHHhCCCcC
Confidence 9998899999999999999998654333222222333345432221 12468999999999999999865555
Q ss_pred ceEEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcccChHHHHhhCCce-eCHHHHHHHHHHHHHHcCCCCC
Q 026418 148 GRYLCAESVLHRGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKDLGLEF-TPVKQCLYETVKSLQEKGHLPI 226 (239)
Q Consensus 148 ~~y~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~p-~~~~e~i~~~~~~~~~~g~~~~ 226 (239)
++|++++.++++.|+++.+.+.++...+.....+..... ....+|++++++|||+| ++++++|+++++|+++++.+++
T Consensus 269 ~~~~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~lGw~p~~~l~~~i~~~~~~~~~~~~~~~ 347 (353)
T PLN02896 269 GRYICCVDSYDMSELINHLSKEYPCSNIQVRLDEEKRGS-IPSEISSKKLRDLGFEYKYGIEEIIDQTIDCCVDHGFLPQ 347 (353)
T ss_pred ccEEecCCCCCHHHHHHHHHHhCCCCCccccccccccCc-cccccCHHHHHHcCCCccCCHHHHHHHHHHHHHHCCCCCc
Confidence 688888889999999999999985433322222211111 23456888888899999 8999999999999999999743
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-31 Score=220.03 Aligned_cols=213 Identities=19% Similarity=0.247 Sum_probs=164.5
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+++|+.++.+|+++|++.++ +|||+|| +.+|+..... +.+|+.+...+ +..+.+.|+.+|.++|+++..+.++.
T Consensus 207 ~~~Nv~gt~nLleaa~~~g~-r~V~~SS-~~VYg~~~~~---p~~E~~~~~~~-P~~~~s~Y~~SK~~aE~~~~~y~~~~ 280 (442)
T PLN02206 207 IKTNVVGTLNMLGLAKRVGA-RFLLTST-SEVYGDPLQH---PQVETYWGNVN-PIGVRSCYDEGKRTAETLTMDYHRGA 280 (442)
T ss_pred HHHHHHHHHHHHHHHHHhCC-EEEEECC-hHHhCCCCCC---CCCccccccCC-CCCccchHHHHHHHHHHHHHHHHHHh
Confidence 46899999999999999996 8999999 5999876544 56776532211 12456889999999999999998888
Q ss_pred CccEEEEecCcccCCCCCCC-CChhHHHHHHHHcCCCCc-cCC--CCCCceehHHHHHHHHHhhcCCCCCceEEEe-cCC
Q 026418 82 GVDLVVVNPVLVLGPLLQST-VNASIIHILKYLNGSAKT-YAN--SVQAYVHVRDVALAHILVYETPSASGRYLCA-ESV 156 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~-~~~--~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~ 156 (239)
+++++++||+++|||+.... ......++.+++.++++. +++ ..++|+|++|+|++++.+++.. ..++||++ +++
T Consensus 281 g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~e~~-~~g~yNIgs~~~ 359 (442)
T PLN02206 281 NVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGE-HVGPFNLGNPGE 359 (442)
T ss_pred CCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHHhcC-CCceEEEcCCCc
Confidence 99999999999999975422 223345667777776654 454 4679999999999999998754 44699887 788
Q ss_pred CCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcccChHHHHh-hCCce-eCHHHHHHHHHHHHHHcC
Q 026418 157 LHRGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKD-LGLEF-TPVKQCLYETVKSLQEKG 222 (239)
Q Consensus 157 ~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p-~~~~e~i~~~~~~~~~~g 222 (239)
+|+.|+++.+.+.+ +.+......+..........+|++|+++ |||+| ++++|+|+++++|+++.-
T Consensus 360 ~sl~Elae~i~~~~-g~~~~i~~~p~~~~~~~~~~~d~sKa~~~LGw~P~~~l~egl~~~~~~~~~~~ 426 (442)
T PLN02206 360 FTMLELAKVVQETI-DPNAKIEFRPNTEDDPHKRKPDITKAKELLGWEPKVSLRQGLPLMVKDFRQRV 426 (442)
T ss_pred eeHHHHHHHHHHHh-CCCCceeeCCCCCCCccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHhh
Confidence 99999999999987 3332222222223334567789999976 89999 899999999999997643
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.7e-31 Score=219.44 Aligned_cols=214 Identities=19% Similarity=0.242 Sum_probs=160.0
Q ss_pred chhHhHHHHHHHHHHHhcCCC-EEEEccchhhhccCCCCCCCccccCCCCC-------C-hhhcccCCchHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKVR-RVVFTSSIGAVYMDPNRSPDDVVDESCWS-------D-LEFCKNTKNWYCYGKAVAEK 72 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~-~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~-------~-~~~~~~~~~~Y~~sK~~~E~ 72 (239)
+++|+.||.+++++|++.+++ +|||+|| .++||.... +++|.... + ...+..|.++|+.+|.++|.
T Consensus 163 ~~~Nv~gt~nlleaa~~~gv~~~~V~~SS-~~vYG~~~~----~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~ 237 (442)
T PLN02572 163 QHNNVIGTLNVLFAIKEFAPDCHLVKLGT-MGEYGTPNI----DIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSH 237 (442)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccEEEEec-ceecCCCCC----CCcccccccccccccccccCCCCCCCcchhHHHHHHH
Confidence 468999999999999999985 8999999 599986431 23332100 0 00124678899999999999
Q ss_pred HHHHHHHHcCccEEEEecCcccCCCCCCCC----------------ChhHHHHHHHHcCCCCc-cC--CCCCCceehHHH
Q 026418 73 AAWEEAVARGVDLVVVNPVLVLGPLLQSTV----------------NASIIHILKYLNGSAKT-YA--NSVQAYVHVRDV 133 (239)
Q Consensus 73 ~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~----------------~~~~~~~~~~~~~~~~~-~~--~~~~~~i~v~D~ 133 (239)
+++.+++++|++++++||+++|||+..... .....++.++..|+++. ++ ++.++|+||+|+
T Consensus 238 l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dv 317 (442)
T PLN02572 238 NIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDT 317 (442)
T ss_pred HHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHH
Confidence 999999999999999999999999854311 12234456677787654 45 456799999999
Q ss_pred HHHHHHhhcCCCC-C--ceEEEecCCCCHHHHHHHHHHh---CCCCCCCCCCCC--CCCCCCCCcccChHHHHhhCCce-
Q 026418 134 ALAHILVYETPSA-S--GRYLCAESVLHRGEVVEILAKF---FPEYPIPTKCSD--EKNPRKKPYKFSNQKLKDLGLEF- 204 (239)
Q Consensus 134 a~~~~~~~~~~~~-~--~~y~~~~~~~s~~el~~~i~~~---~~~~~~~~~~~~--~~~~~~~~~~~~~~k~~~lg~~p- 204 (239)
|++++.++++... + .+||+++..+|++|+++.+.+. + +.+++....+ ...........|.+|+++|||+|
T Consensus 318 a~a~~~al~~~~~~g~~~i~Nigs~~~si~el~~~i~~~~~~~-g~~~~~~~~p~~~~~~~~~~~~~d~~k~~~LGw~p~ 396 (442)
T PLN02572 318 VRCIEIAIANPAKPGEFRVFNQFTEQFSVNELAKLVTKAGEKL-GLDVEVISVPNPRVEAEEHYYNAKHTKLCELGLEPH 396 (442)
T ss_pred HHHHHHHHhChhhcCceeEEEeCCCceeHHHHHHHHHHHHHhh-CCCCCeeeCCCCcccccccccCccHHHHHHcCCCCC
Confidence 9999999986432 2 2788887889999999999998 5 3333332222 12223345667899998899999
Q ss_pred e---CHHHHHHHHHHHHHHc
Q 026418 205 T---PVKQCLYETVKSLQEK 221 (239)
Q Consensus 205 ~---~~~e~i~~~~~~~~~~ 221 (239)
+ ++.++|.+++.||++.
T Consensus 397 ~~~~~l~~~l~~~~~~~~~~ 416 (442)
T PLN02572 397 LLSDSLLDSLLNFAVKYKDR 416 (442)
T ss_pred CcHHHHHHHHHHHHHHHHhh
Confidence 6 8999999999999865
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-30 Score=208.95 Aligned_cols=213 Identities=20% Similarity=0.233 Sum_probs=160.5
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCc-hHHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKN-WYCYGKAVAEKAAWEEAVA 80 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~-~Y~~sK~~~E~~~~~~~~~ 80 (239)
++.|+.++.+|+++|+++++++|||+|| ..+|+..... +++|+++... +..|.+ .|+.+|.++|++++.+.+.
T Consensus 74 ~~~n~~~~~~ll~~~~~~~~~~~i~~SS-~~vyg~~~~~---~~~E~~~~~~--~~~p~~~~Y~~sK~~~e~~~~~~~~~ 147 (306)
T PLN02725 74 IRENLQIQTNVIDAAYRHGVKKLLFLGS-SCIYPKFAPQ---PIPETALLTG--PPEPTNEWYAIAKIAGIKMCQAYRIQ 147 (306)
T ss_pred HHHHhHHHHHHHHHHHHcCCCeEEEeCc-eeecCCCCCC---CCCHHHhccC--CCCCCcchHHHHHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999 5999865443 7888764321 123444 5999999999999999888
Q ss_pred cCccEEEEecCcccCCCCCCC---CChhHHHHHH----HHcCCCCc--cC--CCCCCceehHHHHHHHHHhhcCCCCCce
Q 026418 81 RGVDLVVVNPVLVLGPLLQST---VNASIIHILK----YLNGSAKT--YA--NSVQAYVHVRDVALAHILVYETPSASGR 149 (239)
Q Consensus 81 ~~~~~~i~Rp~~v~G~~~~~~---~~~~~~~~~~----~~~~~~~~--~~--~~~~~~i~v~D~a~~~~~~~~~~~~~~~ 149 (239)
.+++++++||+.+|||+.... ......++.. ...+.+.. ++ +..++|+|++|++++++.++......+.
T Consensus 148 ~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~~~~~~~~~~~ 227 (306)
T PLN02725 148 YGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVFLMRRYSGAEH 227 (306)
T ss_pred hCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHHHHhccccCcc
Confidence 899999999999999975321 1122223332 33455433 34 4467999999999999999986544457
Q ss_pred EEEe-cCCCCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcccChHHHHhhCCce-eCHHHHHHHHHHHHHHc
Q 026418 150 YLCA-ESVLHRGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKDLGLEF-TPVKQCLYETVKSLQEK 221 (239)
Q Consensus 150 y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~p-~~~~e~i~~~~~~~~~~ 221 (239)
||++ +.++|+.|+++.+.+.+ +.+.................+|++|++++||+| ++++++|+++++|++++
T Consensus 228 ~ni~~~~~~s~~e~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~~~~~l~~~~~~~~~~ 300 (306)
T PLN02725 228 VNVGSGDEVTIKELAELVKEVV-GFEGELVWDTSKPDGTPRKLMDSSKLRSLGWDPKFSLKDGLQETYKWYLEN 300 (306)
T ss_pred eEeCCCCcccHHHHHHHHHHHh-CCCCceeecCCCCCcccccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHhh
Confidence 8887 78999999999999987 443322222222222345678999998899999 89999999999999865
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-30 Score=211.61 Aligned_cols=213 Identities=20% Similarity=0.226 Sum_probs=163.2
Q ss_pred chhHhHHHHHHHHHHHhc---------CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA---------KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEK 72 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~---------~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~ 72 (239)
+++|+.+|.+++++|.+. ++++|||+|| .++|+..... ..+++|+++ ..|.+.|+.||.++|.
T Consensus 98 ~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS-~~vyg~~~~~-~~~~~E~~~------~~p~s~Y~~sK~~~e~ 169 (355)
T PRK10217 98 IETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHIST-DEVYGDLHST-DDFFTETTP------YAPSSPYSASKASSDH 169 (355)
T ss_pred HHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecc-hhhcCCCCCC-CCCcCCCCC------CCCCChhHHHHHHHHH
Confidence 578999999999999873 4689999999 5999864321 125778765 3467889999999999
Q ss_pred HHHHHHHHcCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCc-cC--CCCCCceehHHHHHHHHHhhcCCCCCce
Q 026418 73 AAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKT-YA--NSVQAYVHVRDVALAHILVYETPSASGR 149 (239)
Q Consensus 73 ~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~i~v~D~a~~~~~~~~~~~~~~~ 149 (239)
+++.++++.+++++++||+++|||+..+. .....++.++..+.++. ++ +..++|+|++|+|++++.++.....+++
T Consensus 170 ~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~-~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~~~~~~~~~~~~~ 248 (355)
T PRK10217 170 LVRAWLRTYGLPTLITNCSNNYGPYHFPE-KLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATTGKVGET 248 (355)
T ss_pred HHHHHHHHhCCCeEEEeeeeeeCCCCCcc-cHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHHHHHHhcCCCCCe
Confidence 99999888899999999999999986432 23334556677776543 44 4588999999999999999987554559
Q ss_pred EEEe-cCCCCHHHHHHHHHHhCCC----CCCCC-------CCCCCCCCCCCCcccChHHHHh-hCCce-eCHHHHHHHHH
Q 026418 150 YLCA-ESVLHRGEVVEILAKFFPE----YPIPT-------KCSDEKNPRKKPYKFSNQKLKD-LGLEF-TPVKQCLYETV 215 (239)
Q Consensus 150 y~~~-~~~~s~~el~~~i~~~~~~----~~~~~-------~~~~~~~~~~~~~~~~~~k~~~-lg~~p-~~~~e~i~~~~ 215 (239)
||++ ++++|+.|+++.+.+.++. .+.+. ............+.+|++|+++ |||+| ++++|+|++++
T Consensus 249 yni~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~l~e~l~~~~ 328 (355)
T PRK10217 249 YNIGGHNERKNLDVVETICELLEELAPNKPQGVAHYRDLITFVADRPGHDLRYAIDASKIARELGWLPQETFESGMRKTV 328 (355)
T ss_pred EEeCCCCcccHHHHHHHHHHHhcccccccccccccccccceecCCCCCCCcccccCHHHHHHhcCCCCcCcHHHHHHHHH
Confidence 9988 7889999999999997631 11111 0111122233456889999966 99999 99999999999
Q ss_pred HHHHHcCC
Q 026418 216 KSLQEKGH 223 (239)
Q Consensus 216 ~~~~~~g~ 223 (239)
+|++.+..
T Consensus 329 ~~~~~~~~ 336 (355)
T PRK10217 329 QWYLANES 336 (355)
T ss_pred HHHHhCHH
Confidence 99988754
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-30 Score=207.75 Aligned_cols=206 Identities=17% Similarity=0.184 Sum_probs=156.3
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
++.|+.++.+|+++|++.++ +|||+|| .++|+..... +.+|+++ ..|.++|+.+|..+|++++.+..+.
T Consensus 90 ~~~n~~~t~~ll~~~~~~~~-~~i~~SS-~~vyg~~~~~---~~~E~~~------~~p~~~Y~~sK~~~E~~~~~~~~~~ 158 (308)
T PRK11150 90 MDNNYQYSKELLHYCLEREI-PFLYASS-AATYGGRTDD---FIEEREY------EKPLNVYGYSKFLFDEYVRQILPEA 158 (308)
T ss_pred HHHHHHHHHHHHHHHHHcCC-cEEEEcc-hHHhCcCCCC---CCccCCC------CCCCCHHHHHHHHHHHHHHHHHHHc
Confidence 56899999999999999987 6999999 5999875433 5666654 3567899999999999999998888
Q ss_pred CccEEEEecCcccCCCCCCCCC---hhHHHHHHHHcCCCCc-c-CC--CCCCceehHHHHHHHHHhhcCCCCCceEEEe-
Q 026418 82 GVDLVVVNPVLVLGPLLQSTVN---ASIIHILKYLNGSAKT-Y-AN--SVQAYVHVRDVALAHILVYETPSASGRYLCA- 153 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~~~---~~~~~~~~~~~~~~~~-~-~~--~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~- 153 (239)
+++++++||+++|||+...... ....++.++.+|..+. + ++ ..++|+|++|+|++++.+++.. ..++||++
T Consensus 159 ~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~~~-~~~~yni~~ 237 (308)
T PRK11150 159 NSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFWENG-VSGIFNCGT 237 (308)
T ss_pred CCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHHhcC-CCCeEEcCC
Confidence 9999999999999998643221 1122335677776543 3 33 3689999999999999988764 34699987
Q ss_pred cCCCCHHHHHHHHHHhCCCCCCCCCCCCC--CCCCCCCcccChHHHHhhCCce--eCHHHHHHHHHHHHH
Q 026418 154 ESVLHRGEVVEILAKFFPEYPIPTKCSDE--KNPRKKPYKFSNQKLKDLGLEF--TPVKQCLYETVKSLQ 219 (239)
Q Consensus 154 ~~~~s~~el~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~k~~~lg~~p--~~~~e~i~~~~~~~~ 219 (239)
+..+|+.|+++.+.+.++...+.....+. .........+|++|++++||+| ++++++|+++++|+.
T Consensus 238 ~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~g~~p~~~~~~~gl~~~~~~~~ 307 (308)
T PRK11150 238 GRAESFQAVADAVLAYHKKGEIEYIPFPDKLKGRYQAFTQADLTKLRAAGYDKPFKTVAEGVAEYMAWLN 307 (308)
T ss_pred CCceeHHHHHHHHHHHhCCCcceeccCccccccccceecccCHHHHHhcCCCCCCCCHHHHHHHHHHHhh
Confidence 77899999999999987422222111111 1112234578999999899997 499999999999974
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.3e-30 Score=226.01 Aligned_cols=213 Identities=21% Similarity=0.217 Sum_probs=164.1
Q ss_pred chhHhHHHHHHHHHHHhcC-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA 80 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 80 (239)
+++|+.+|.+|+++|++.+ +++|||+|| ..+||.....+....+|+++ ..|.+.|+.+|..+|++++.+.++
T Consensus 104 ~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS-~~vyg~~~~~~~~~~~E~~~------~~p~~~Y~~sK~~aE~~v~~~~~~ 176 (668)
T PLN02260 104 TKNNIYGTHVLLEACKVTGQIRRFIHVST-DEVYGETDEDADVGNHEASQ------LLPTNPYSATKAGAEMLVMAYGRS 176 (668)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEEcc-hHHhCCCccccccCccccCC------CCCCCCcHHHHHHHHHHHHHHHHH
Confidence 4689999999999999988 899999999 59998764321112345544 346789999999999999999888
Q ss_pred cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCc-cC--CCCCCceehHHHHHHHHHhhcCCCCCceEEEe-cCC
Q 026418 81 RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKT-YA--NSVQAYVHVRDVALAHILVYETPSASGRYLCA-ESV 156 (239)
Q Consensus 81 ~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~ 156 (239)
.+++++++||+++|||+.... .....++..+..+..+. ++ +..++|+|++|+|+++..++.....+++||++ ++.
T Consensus 177 ~~l~~vilR~~~VyGp~~~~~-~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~l~~~~~~~vyni~~~~~ 255 (668)
T PLN02260 177 YGLPVITTRGNNVYGPNQFPE-KLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGEVGHVYNIGTKKE 255 (668)
T ss_pred cCCCEEEECcccccCcCCCcc-cHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHHHhcCCCCCEEEECCCCe
Confidence 899999999999999986432 22334455666666554 34 44678999999999999998766555699988 688
Q ss_pred CCHHHHHHHHHHhCCCCCCC--CCCCCCCCCCCCCcccChHHHHhhCCce-eCHHHHHHHHHHHHHHcCC
Q 026418 157 LHRGEVVEILAKFFPEYPIP--TKCSDEKNPRKKPYKFSNQKLKDLGLEF-TPVKQCLYETVKSLQEKGH 223 (239)
Q Consensus 157 ~s~~el~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~k~~~lg~~p-~~~~e~i~~~~~~~~~~g~ 223 (239)
+|+.|+++.+.+.++ .+.. ....+........+.+|++|+++|||+| ++++|+|+++++|+++++.
T Consensus 256 ~s~~el~~~i~~~~g-~~~~~~i~~~~~~p~~~~~~~~d~~k~~~lGw~p~~~~~egl~~~i~w~~~~~~ 324 (668)
T PLN02260 256 RRVIDVAKDICKLFG-LDPEKSIKFVENRPFNDQRYFLDDQKLKKLGWQERTSWEEGLKKTMEWYTSNPD 324 (668)
T ss_pred eEHHHHHHHHHHHhC-CCCcceeeecCCCCCCcceeecCHHHHHHcCCCCCCCHHHHHHHHHHHHHhChh
Confidence 999999999999973 3211 1111222223345678999998899999 9999999999999987654
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.4e-30 Score=224.46 Aligned_cols=220 Identities=17% Similarity=0.191 Sum_probs=166.4
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcc-cCCchHHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCK-NTKNWYCYGKAVAEKAAWEEAVA 80 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~-~~~~~Y~~sK~~~E~~~~~~~~~ 80 (239)
+++|+.++.+++++|++++ ++|||+|| +++||..... +++|+++..+..+. .|.+.|+.+|.++|++++.+++.
T Consensus 406 ~~~Nv~~t~~ll~a~~~~~-~~~V~~SS-~~vyg~~~~~---~~~E~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~ 480 (660)
T PRK08125 406 FELDFEENLKIIRYCVKYN-KRIIFPST-SEVYGMCTDK---YFDEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGEK 480 (660)
T ss_pred HHhhHHHHHHHHHHHHhcC-CeEEEEcc-hhhcCCCCCC---CcCccccccccCCCCCCccchHHHHHHHHHHHHHHHHh
Confidence 5689999999999999998 89999999 5999865433 67888764321111 35678999999999999999888
Q ss_pred cCccEEEEecCcccCCCCCC-------CCChhHHHHHHHHcCCCCc-cC--CCCCCceehHHHHHHHHHhhcCCC--C-C
Q 026418 81 RGVDLVVVNPVLVLGPLLQS-------TVNASIIHILKYLNGSAKT-YA--NSVQAYVHVRDVALAHILVYETPS--A-S 147 (239)
Q Consensus 81 ~~~~~~i~Rp~~v~G~~~~~-------~~~~~~~~~~~~~~~~~~~-~~--~~~~~~i~v~D~a~~~~~~~~~~~--~-~ 147 (239)
.+++++++||+++|||+... .......++.++..++++. ++ +..++|+|++|+|+++++++++.. . +
T Consensus 481 ~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~~~~l~~~~~~~~g 560 (660)
T PRK08125 481 EGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGIEALFRIIENKDNRCDG 560 (660)
T ss_pred cCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHHHHHHHHHHhccccccCC
Confidence 89999999999999997532 1123345567777777654 34 457899999999999999998653 2 3
Q ss_pred ceEEEe-cC-CCCHHHHHHHHHHhCCCCCCCCCCCCC--------------CCCCCCCcccChHHHHh-hCCce-eCHHH
Q 026418 148 GRYLCA-ES-VLHRGEVVEILAKFFPEYPIPTKCSDE--------------KNPRKKPYKFSNQKLKD-LGLEF-TPVKQ 209 (239)
Q Consensus 148 ~~y~~~-~~-~~s~~el~~~i~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~k~~~-lg~~p-~~~~e 209 (239)
++||++ ++ .+|++|+++.+.+.++........... ..........|++|+++ |||+| +++++
T Consensus 561 ~iyni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ka~~~LGw~P~~~lee 640 (660)
T PRK08125 561 QIINIGNPDNEASIRELAEMLLASFEKHPLRDHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRLLDWEPKIDMQE 640 (660)
T ss_pred eEEEcCCCCCceeHHHHHHHHHHHhccCcccccCCccccccccccccccccccccccccCCChHHHHHHhCCCCCCcHHH
Confidence 389988 44 699999999999987422211111110 01123345679999976 89999 99999
Q ss_pred HHHHHHHHHHHcCCCCC
Q 026418 210 CLYETVKSLQEKGHLPI 226 (239)
Q Consensus 210 ~i~~~~~~~~~~g~~~~ 226 (239)
+|+++++|+++++.|..
T Consensus 641 ~l~~~i~~~~~~~~~~~ 657 (660)
T PRK08125 641 TIDETLDFFLRTVDLTE 657 (660)
T ss_pred HHHHHHHHHHhcccccc
Confidence 99999999998887754
|
|
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.4e-30 Score=193.46 Aligned_cols=212 Identities=20% Similarity=0.266 Sum_probs=176.1
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+.+|+.||.+++..|++.+ +||+++|| +.|||++... |..|+.+.+.. +..|+..|...|+.+|.++..|.++.
T Consensus 115 IktN~igtln~lglakrv~-aR~l~aST-seVYgdp~~h---pq~e~ywg~vn-pigpr~cydegKr~aE~L~~~y~k~~ 188 (350)
T KOG1429|consen 115 IKTNVIGTLNMLGLAKRVG-ARFLLAST-SEVYGDPLVH---PQVETYWGNVN-PIGPRSCYDEGKRVAETLCYAYHKQE 188 (350)
T ss_pred eeecchhhHHHHHHHHHhC-ceEEEeec-ccccCCcccC---CCccccccccC-cCCchhhhhHHHHHHHHHHHHhhccc
Confidence 4679999999999999998 89999999 6999998776 67777765543 25678889999999999999999999
Q ss_pred CccEEEEecCcccCCCCCCCCChh-HHHHHHHHcCCCCc-cCCC--CCCceehHHHHHHHHHhhcCCCCCceEEEe-cCC
Q 026418 82 GVDLVVVNPVLVLGPLLQSTVNAS-IIHILKYLNGSAKT-YANS--VQAYVHVRDVALAHILVYETPSASGRYLCA-ESV 156 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~--~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~ 156 (239)
|+.+.|.|+++.|||.++-..... ..++.+.+++++.. +|+| .++|.||.|++++++++++.+..+ -+|++ ++.
T Consensus 189 giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm~s~~~~-pvNiGnp~e 267 (350)
T KOG1429|consen 189 GIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLMESDYRG-PVNIGNPGE 267 (350)
T ss_pred CcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHhcCCCcC-CcccCCccc
Confidence 999999999999999876544433 45667888888876 5655 567999999999999999876554 46666 789
Q ss_pred CCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcccChHHHHh-hCCce-eCHHHHHHHHHHHHHHc
Q 026418 157 LHRGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKD-LGLEF-TPVKQCLYETVKSLQEK 221 (239)
Q Consensus 157 ~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p-~~~~e~i~~~~~~~~~~ 221 (239)
+|+.|+++++.+.. +......+.....+++....-|++++++ |||.| .+|+|+|..++.|+++.
T Consensus 268 ~Tm~elAemv~~~~-~~~s~i~~~~~~~Ddp~kR~pDit~ake~LgW~Pkv~L~egL~~t~~~fr~~ 333 (350)
T KOG1429|consen 268 FTMLELAEMVKELI-GPVSEIEFVENGPDDPRKRKPDITKAKEQLGWEPKVSLREGLPLTVTYFRER 333 (350)
T ss_pred eeHHHHHHHHHHHc-CCCcceeecCCCCCCccccCccHHHHHHHhCCCCCCcHHHhhHHHHHHHHHH
Confidence 99999999999997 3333334444456677888999999987 99999 99999999999999765
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-29 Score=207.49 Aligned_cols=211 Identities=17% Similarity=0.087 Sum_probs=163.2
Q ss_pred chhHhHHHHHHHHHHHhcC-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA 80 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 80 (239)
+++|+.++.+++++|++.+ ++++|++|| .++|+..... .+++|+++. .|.++|+.+|.++|.+++.++++
T Consensus 99 ~~~N~~g~~~ll~a~~~~~~~~~iv~~SS-~~vyg~~~~~--~~~~e~~~~------~p~~~Y~~sK~~~e~~~~~~~~~ 169 (349)
T TIGR02622 99 FETNVMGTVNLLEAIRAIGSVKAVVNVTS-DKCYRNDEWV--WGYRETDPL------GGHDPYSSSKACAELVIASYRSS 169 (349)
T ss_pred HHHhHHHHHHHHHHHHhcCCCCEEEEEec-hhhhCCCCCC--CCCccCCCC------CCCCcchhHHHHHHHHHHHHHHH
Confidence 5789999999999999887 789999999 5999764321 156776552 45789999999999999998765
Q ss_pred c-------CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCcc--CCCCCCceehHHHHHHHHHhhcCC-----CC
Q 026418 81 R-------GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY--ANSVQAYVHVRDVALAHILVYETP-----SA 146 (239)
Q Consensus 81 ~-------~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~D~a~~~~~~~~~~-----~~ 146 (239)
. +++++++||+++|||++.........++..+..|+.+.+ +++.++|+|++|+|++++.++... ..
T Consensus 170 ~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~rd~i~v~D~a~a~~~~~~~~~~~~~~~ 249 (349)
T TIGR02622 170 FFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRNPDATRPWQHVLEPLSGYLLLAEKLFTGQAEF 249 (349)
T ss_pred hhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEECCCCcccceeeHHHHHHHHHHHHHHHhhcCccc
Confidence 4 899999999999999753222334566677777877655 456889999999999999877642 12
Q ss_pred CceEEEe-c--CCCCHHHHHHHHHHhCCCCCCCCCCC--CCCCCCCCCcccChHHHHh-hCCce-eCHHHHHHHHHHHHH
Q 026418 147 SGRYLCA-E--SVLHRGEVVEILAKFFPEYPIPTKCS--DEKNPRKKPYKFSNQKLKD-LGLEF-TPVKQCLYETVKSLQ 219 (239)
Q Consensus 147 ~~~y~~~-~--~~~s~~el~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~k~~~-lg~~p-~~~~e~i~~~~~~~~ 219 (239)
+++||++ + .++++.|+++.+.+.+++.++..... +..........+|++|+++ |||+| ++++++|+++++|++
T Consensus 250 ~~~yni~s~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~p~~~l~~gi~~~i~w~~ 329 (349)
T TIGR02622 250 AGAWNFGPRASDNARVVELVVDALEFWWGDDAEWEDDSDLNHPHEARLLKLDSSKARTLLGWHPRWGLEEAVSRTVDWYK 329 (349)
T ss_pred cceeeeCCCcccCcCHHHHHHHHHHHhcCCCCceeeccCCCCCcccceeecCHHHHHHHhCCCCCCCHHHHHHHHHHHHH
Confidence 3599998 3 68999999999998765544333221 1223344567889999977 89999 999999999999998
Q ss_pred Hc
Q 026418 220 EK 221 (239)
Q Consensus 220 ~~ 221 (239)
+.
T Consensus 330 ~~ 331 (349)
T TIGR02622 330 AW 331 (349)
T ss_pred HH
Confidence 65
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-29 Score=207.70 Aligned_cols=214 Identities=19% Similarity=0.212 Sum_probs=161.9
Q ss_pred CchhHhHHHHHHHHHHHhc---------CCCEEEEccchhhhccCCCCC-------CCccccCCCCCChhhcccCCchHH
Q 026418 1 MVEPAVIGTKNVIVAAAEA---------KVRRVVFTSSIGAVYMDPNRS-------PDDVVDESCWSDLEFCKNTKNWYC 64 (239)
Q Consensus 1 ~~~~Nv~~t~~ll~a~~~~---------~v~~~i~~Ss~~~vy~~~~~~-------~~~~~~E~~~~~~~~~~~~~~~Y~ 64 (239)
++++|+.|+.+++++|++. ++++|||+|| .++|+..... ...+++|+++ ..|.+.|+
T Consensus 96 ~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS-~~vyg~~~~~~~~~~~~~~~~~~E~~~------~~p~~~Y~ 168 (352)
T PRK10084 96 FIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHIST-DEVYGDLPHPDEVENSEELPLFTETTA------YAPSSPYS 168 (352)
T ss_pred hhhhhhHHHHHHHHHHHHhccccccccccceeEEEecc-hhhcCCCCccccccccccCCCccccCC------CCCCChhH
Confidence 3679999999999999874 4679999999 5999863210 0013566654 35678999
Q ss_pred HHHHHHHHHHHHHHHHcCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCc-c--CCCCCCceehHHHHHHHHHhh
Q 026418 65 YGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKT-Y--ANSVQAYVHVRDVALAHILVY 141 (239)
Q Consensus 65 ~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~i~v~D~a~~~~~~~ 141 (239)
.+|.++|.+++.+++.++++++++|++++|||+.... .....++..+..+.... + ++..++|+|++|+|++++.++
T Consensus 169 ~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~a~~~~l 247 (352)
T PRK10084 169 ASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPE-KLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALYKVV 247 (352)
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCcc-chHHHHHHHHhcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHH
Confidence 9999999999999888899999999999999985432 23334556666666543 4 456789999999999999998
Q ss_pred cCCCCCceEEEe-cCCCCHHHHHHHHHHhCCCCCCCCC--------CCCCCCCCCCCcccChHHHHh-hCCce-eCHHHH
Q 026418 142 ETPSASGRYLCA-ESVLHRGEVVEILAKFFPEYPIPTK--------CSDEKNPRKKPYKFSNQKLKD-LGLEF-TPVKQC 210 (239)
Q Consensus 142 ~~~~~~~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~k~~~-lg~~p-~~~~e~ 210 (239)
+....+++||++ ++++|++|+++.+++.++ ...|.. ...........+.+|++|+++ |||+| ++++++
T Consensus 248 ~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~l~~~ 326 (352)
T PRK10084 248 TEGKAGETYNIGGHNEKKNLDVVLTICDLLD-EIVPKATSYREQITYVADRPGHDRRYAIDASKISRELGWKPQETFESG 326 (352)
T ss_pred hcCCCCceEEeCCCCcCcHHHHHHHHHHHhc-cccccccchhhhccccccCCCCCceeeeCHHHHHHHcCCCCcCCHHHH
Confidence 865445699988 788999999999998873 211111 111122223456789999976 99999 899999
Q ss_pred HHHHHHHHHHcCC
Q 026418 211 LYETVKSLQEKGH 223 (239)
Q Consensus 211 i~~~~~~~~~~g~ 223 (239)
|+++++|++++..
T Consensus 327 l~~~~~~~~~~~~ 339 (352)
T PRK10084 327 IRKTVEWYLANTE 339 (352)
T ss_pred HHHHHHHHHhCHH
Confidence 9999999988654
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-29 Score=204.49 Aligned_cols=207 Identities=15% Similarity=0.064 Sum_probs=159.0
Q ss_pred chhHhHHHHHHHHHHHhcCCC---EEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKVR---RVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA 78 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~---~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~ 78 (239)
+++|+.||.+|+++|++.+++ +|||+|| .++||..... +++|+.+. .|.++|+.||..+|.+++.++
T Consensus 102 ~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS-~~vyg~~~~~---~~~E~~~~------~p~~~Y~~sK~~~e~~~~~~~ 171 (343)
T TIGR01472 102 ADVDGIGTLRLLEAVRTLGLIKSVKFYQAST-SELYGKVQEI---PQNETTPF------YPRSPYAAAKLYAHWITVNYR 171 (343)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcCeeEEEecc-HHhhCCCCCC---CCCCCCCC------CCCChhHHHHHHHHHHHHHHH
Confidence 357999999999999998853 8999999 5999875443 67787653 567899999999999999998
Q ss_pred HHcCccEEEEecCcccCCCCCCCC--ChhHHHHHHHHcCCCC--ccC--CCCCCceehHHHHHHHHHhhcCCCCCceEEE
Q 026418 79 VARGVDLVVVNPVLVLGPLLQSTV--NASIIHILKYLNGSAK--TYA--NSVQAYVHVRDVALAHILVYETPSASGRYLC 152 (239)
Q Consensus 79 ~~~~~~~~i~Rp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~--~~~--~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~ 152 (239)
++.+++++..|+.++|||+..... ......+..+..++.. .++ ++.++|+||+|+|++++.++.+.. .++||+
T Consensus 172 ~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a~~~~~~~~~-~~~yni 250 (343)
T TIGR01472 172 EAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVEAMWLMLQQDK-PDDYVI 250 (343)
T ss_pred HHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHHHHHHHHhcCC-CccEEe
Confidence 888999999999999999743221 1222344556666542 234 568999999999999999997653 368988
Q ss_pred e-cCCCCHHHHHHHHHHhCCCCCCCC---------------------CCCCCCCCCCCCcccChHHHHh-hCCce-eCHH
Q 026418 153 A-ESVLHRGEVVEILAKFFPEYPIPT---------------------KCSDEKNPRKKPYKFSNQKLKD-LGLEF-TPVK 208 (239)
Q Consensus 153 ~-~~~~s~~el~~~i~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~k~~~-lg~~p-~~~~ 208 (239)
+ ++++|++|+++.+.+.+ +.+.+. ...............|++|+++ |||+| ++++
T Consensus 251 ~~g~~~s~~e~~~~i~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~p~~~l~ 329 (343)
T TIGR01472 251 ATGETHSVREFVEVSFEYI-GKTLNWKDKGINEVGRCKETGKVHVEIDPRYFRPTEVDLLLGDATKAKEKLGWKPEVSFE 329 (343)
T ss_pred cCCCceeHHHHHHHHHHHc-CCCcccccccccccccccccCceeEEeCccccCCCccchhcCCHHHHHHhhCCCCCCCHH
Confidence 7 89999999999999987 433211 0111123334556779999976 89999 9999
Q ss_pred HHHHHHHHHHHH
Q 026418 209 QCLYETVKSLQE 220 (239)
Q Consensus 209 e~i~~~~~~~~~ 220 (239)
|+|+++++++++
T Consensus 330 egi~~~~~~~~~ 341 (343)
T TIGR01472 330 KLVKEMVEEDLE 341 (343)
T ss_pred HHHHHHHHHHHh
Confidence 999999999874
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-29 Score=206.55 Aligned_cols=216 Identities=15% Similarity=0.196 Sum_probs=159.3
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCCh-hhcccCCchHHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDL-EFCKNTKNWYCYGKAVAEKAAWEEAVA 80 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~-~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 80 (239)
+++|+.++.+|+++|++.+ ++|||+|| .++||..... +++|+++... .....|.+.|+.+|.++|++++.++++
T Consensus 92 ~~~n~~~~~~ll~aa~~~~-~~~v~~SS-~~vyg~~~~~---~~~ee~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~ 166 (347)
T PRK11908 92 FELDFEANLPIVRSAVKYG-KHLVFPST-SEVYGMCPDE---EFDPEASPLVYGPINKPRWIYACSKQLMDRVIWAYGME 166 (347)
T ss_pred HHHHHHHHHHHHHHHHhcC-CeEEEEec-ceeeccCCCc---CcCccccccccCcCCCccchHHHHHHHHHHHHHHHHHH
Confidence 5689999999999999988 79999999 4999865433 5666543211 111245678999999999999999888
Q ss_pred cCccEEEEecCcccCCCCCC-------CCChhHHHHHHHHcCCCCcc---CCCCCCceehHHHHHHHHHhhcCCC--C-C
Q 026418 81 RGVDLVVVNPVLVLGPLLQS-------TVNASIIHILKYLNGSAKTY---ANSVQAYVHVRDVALAHILVYETPS--A-S 147 (239)
Q Consensus 81 ~~~~~~i~Rp~~v~G~~~~~-------~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~v~D~a~~~~~~~~~~~--~-~ 147 (239)
.+++++++||+++|||+..+ .......++.++..+++..+ ++..++|+|++|+++++..++.++. . +
T Consensus 167 ~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~~~~~~~~~~~~g 246 (347)
T PRK11908 167 EGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGIDALMKIIENKDGVASG 246 (347)
T ss_pred cCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHHHHHHHHhCccccCCC
Confidence 89999999999999997532 11223456677777876543 3567899999999999999998753 2 3
Q ss_pred ceEEEec--CCCCHHHHHHHHHHhCCCCC-C-----CCCCC--CC------CCCCCCCcccChHHHHh-hCCce-eCHHH
Q 026418 148 GRYLCAE--SVLHRGEVVEILAKFFPEYP-I-----PTKCS--DE------KNPRKKPYKFSNQKLKD-LGLEF-TPVKQ 209 (239)
Q Consensus 148 ~~y~~~~--~~~s~~el~~~i~~~~~~~~-~-----~~~~~--~~------~~~~~~~~~~~~~k~~~-lg~~p-~~~~e 209 (239)
++||+++ ..+|++|+++.|.+.+...+ + +.... .. ..........|.+|+++ |||+| +++++
T Consensus 247 ~~yni~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lGw~p~~~l~~ 326 (347)
T PRK11908 247 KIYNIGNPKNNHSVRELANKMLELAAEYPEYAESAKKVKLVETTSGAYYGKGYQDVQNRVPKIDNTMQELGWAPKTTMDD 326 (347)
T ss_pred CeEEeCCCCCCcCHHHHHHHHHHHhcCcccccccccccccccCCchhccCcCcchhccccCChHHHHHHcCCCCCCcHHH
Confidence 4999984 47999999999998763111 1 00000 00 01122355668899876 89999 89999
Q ss_pred HHHHHHHHHHHcC
Q 026418 210 CLYETVKSLQEKG 222 (239)
Q Consensus 210 ~i~~~~~~~~~~g 222 (239)
+|+++++|++++.
T Consensus 327 ~l~~~~~~~~~~~ 339 (347)
T PRK11908 327 ALRRIFEAYRGHV 339 (347)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998654
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.5e-29 Score=205.01 Aligned_cols=215 Identities=18% Similarity=0.172 Sum_probs=162.7
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHH-
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA- 80 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 80 (239)
+++|+.++.+++++|++.++++|||+|| .++|+..... +++|+++. .|.+.|+.+|..+|++++.+++.
T Consensus 105 ~~~n~~~~~~l~~~~~~~~~~~~v~~Ss-~~vyg~~~~~---~~~E~~~~------~~~~~Y~~sK~~~e~~~~~~~~~~ 174 (352)
T PLN02240 105 YDNNLVGTINLLEVMAKHGCKKLVFSSS-ATVYGQPEEV---PCTEEFPL------SATNPYGRTKLFIEEICRDIHASD 174 (352)
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEEcc-HHHhCCCCCC---CCCCCCCC------CCCCHHHHHHHHHHHHHHHHHHhc
Confidence 5789999999999999999999999999 5999865444 78888763 45788999999999999988654
Q ss_pred cCccEEEEecCcccCCCCC------CC--CChhHHHHHHHHcCCCC---cc--------CCCCCCceehHHHHHHHHHhh
Q 026418 81 RGVDLVVVNPVLVLGPLLQ------ST--VNASIIHILKYLNGSAK---TY--------ANSVQAYVHVRDVALAHILVY 141 (239)
Q Consensus 81 ~~~~~~i~Rp~~v~G~~~~------~~--~~~~~~~~~~~~~~~~~---~~--------~~~~~~~i~v~D~a~~~~~~~ 141 (239)
.+++++++|++++||++.. +. ......++..+..++.+ .+ |.+.++|+|++|+|++++.++
T Consensus 175 ~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~D~a~a~~~a~ 254 (352)
T PLN02240 175 PEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGVRDYIHVMDLADGHIAAL 254 (352)
T ss_pred CCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCEEEeeEEHHHHHHHHHHHH
Confidence 5789999999999997421 11 11122344555544422 12 245688999999999998888
Q ss_pred cCC----CCC-ceEEEe-cCCCCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcccChHHHHh-hCCce-eCHHHHHHH
Q 026418 142 ETP----SAS-GRYLCA-ESVLHRGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKD-LGLEF-TPVKQCLYE 213 (239)
Q Consensus 142 ~~~----~~~-~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p-~~~~e~i~~ 213 (239)
.+. ... ++||++ ++++|++|+++.+.+.+ +.+.+....+...........|++|+++ |||+| ++++++|++
T Consensus 255 ~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~-g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~l~~~l~~ 333 (352)
T PLN02240 255 RKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKAS-GKKIPLKLAPRRPGDAEEVYASTEKAEKELGWKAKYGIDEMCRD 333 (352)
T ss_pred hhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHh-CCCCCceeCCCCCCChhhhhcCHHHHHHHhCCCCCCCHHHHHHH
Confidence 532 233 499887 89999999999999997 5555544433333344556789999976 89999 799999999
Q ss_pred HHHHHHHcCCCCCC
Q 026418 214 TVKSLQEKGHLPIP 227 (239)
Q Consensus 214 ~~~~~~~~g~~~~~ 227 (239)
+++|+++++.--+.
T Consensus 334 ~~~~~~~~~~~~~~ 347 (352)
T PLN02240 334 QWNWASKNPYGYGS 347 (352)
T ss_pred HHHHHHhCccccCC
Confidence 99999988654443
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-29 Score=205.90 Aligned_cols=212 Identities=16% Similarity=0.135 Sum_probs=159.4
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCC-CccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSP-DDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA 80 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~-~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 80 (239)
++.|+.++.+|+++|++.++++|||+|| ..+|+.....+ ..++.|++.. +..|.+.|+.+|..+|++++.++++
T Consensus 110 ~~~N~~~t~nll~aa~~~~vk~~V~~SS-~~vYg~~~~~~~~~~~~E~~~~----p~~p~s~Yg~sK~~~E~~~~~~~~~ 184 (370)
T PLN02695 110 MYNNTMISFNMLEAARINGVKRFFYASS-ACIYPEFKQLETNVSLKESDAW----PAEPQDAYGLEKLATEELCKHYTKD 184 (370)
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEeCc-hhhcCCccccCcCCCcCcccCC----CCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 4579999999999999999999999999 59998653211 1135554421 2357889999999999999999888
Q ss_pred cCccEEEEecCcccCCCCCCCC---ChhHHHHHHHHcC-CCCc-cC--CCCCCceehHHHHHHHHHhhcCCCCCceEEEe
Q 026418 81 RGVDLVVVNPVLVLGPLLQSTV---NASIIHILKYLNG-SAKT-YA--NSVQAYVHVRDVALAHILVYETPSASGRYLCA 153 (239)
Q Consensus 81 ~~~~~~i~Rp~~v~G~~~~~~~---~~~~~~~~~~~~~-~~~~-~~--~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~ 153 (239)
++++++++||+++|||+..... .....++.++.++ ..+. ++ +..++|+|++|+++++++++... ..++||++
T Consensus 185 ~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai~~~~~~~-~~~~~nv~ 263 (370)
T PLN02695 185 FGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVLRLTKSD-FREPVNIG 263 (370)
T ss_pred hCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHHHHHHhcc-CCCceEec
Confidence 8999999999999999753221 1233455555553 3332 44 45789999999999999988754 34689887
Q ss_pred -cCCCCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcccChHHHHh-hCCce-eCHHHHHHHHHHHHHHc
Q 026418 154 -ESVLHRGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKD-LGLEF-TPVKQCLYETVKSLQEK 221 (239)
Q Consensus 154 -~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p-~~~~e~i~~~~~~~~~~ 221 (239)
++.+|++|+++.+.+.. +.+.+....+. .........|++|+++ |||+| ++++++|+++++|+++.
T Consensus 264 ~~~~~s~~el~~~i~~~~-g~~~~i~~~~~-~~~~~~~~~d~sk~~~~lgw~p~~~l~e~i~~~~~~~~~~ 332 (370)
T PLN02695 264 SDEMVSMNEMAEIALSFE-NKKLPIKHIPG-PEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYFWIKEQ 332 (370)
T ss_pred CCCceeHHHHHHHHHHHh-CCCCCceecCC-CCCccccccCHHHHHHhcCCCCCCCHHHHHHHHHHHHHHH
Confidence 78899999999999886 44444333221 1122345689999986 89999 89999999999999765
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-29 Score=208.30 Aligned_cols=215 Identities=16% Similarity=0.213 Sum_probs=155.8
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChh----------------hcccCCchHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLE----------------FCKNTKNWYCY 65 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~----------------~~~~~~~~Y~~ 65 (239)
+..|+.++.+++++|++.+ ++|||+|| .++||..... +++|+.+..++ ....|.+.|+.
T Consensus 110 ~~~n~~gt~~ll~aa~~~~-~r~v~~SS-~~vYg~~~~~---~~~e~~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~ 184 (386)
T PLN02427 110 IYSNFIDALPVVKYCSENN-KRLIHFST-CEVYGKTIGS---FLPKDHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYAC 184 (386)
T ss_pred HHHHHHHHHHHHHHHHhcC-CEEEEEee-eeeeCCCcCC---CCCcccccccccccccccccccccccCCCCccccchHH
Confidence 3579999999999999887 89999999 5999875432 33343332110 00124568999
Q ss_pred HHHHHHHHHHHHHHHcCccEEEEecCcccCCCCCCC---------CC-hhHHHHHHHHcCCCCc-cC--CCCCCceehHH
Q 026418 66 GKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQST---------VN-ASIIHILKYLNGSAKT-YA--NSVQAYVHVRD 132 (239)
Q Consensus 66 sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~---------~~-~~~~~~~~~~~~~~~~-~~--~~~~~~i~v~D 132 (239)
+|.++|++++.++++.+++++++||+++|||+.... .. ....++..+++++++. ++ ...++|+||+|
T Consensus 185 sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~D 264 (386)
T PLN02427 185 AKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKD 264 (386)
T ss_pred HHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCeEEECCCCceECcEeHHH
Confidence 999999999999888899999999999999975310 01 1223345666776654 34 44679999999
Q ss_pred HHHHHHHhhcCCC-CC-ceEEEe-c-CCCCHHHHHHHHHHhCCCCCC-C---CC--CCC------CCCCCCCCcccChHH
Q 026418 133 VALAHILVYETPS-AS-GRYLCA-E-SVLHRGEVVEILAKFFPEYPI-P---TK--CSD------EKNPRKKPYKFSNQK 196 (239)
Q Consensus 133 ~a~~~~~~~~~~~-~~-~~y~~~-~-~~~s~~el~~~i~~~~~~~~~-~---~~--~~~------~~~~~~~~~~~~~~k 196 (239)
+|++++.+++++. .. ++||++ + ..+|+.|+++.+.+.++.... + .. ..+ ...........|.+|
T Consensus 265 va~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k 344 (386)
T PLN02427 265 AIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAKVSGEPALEEPTVDVSSKEFYGEGYDDSDKRIPDMTI 344 (386)
T ss_pred HHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhccccccccccccccccCcccccCccccchhhccCCHHH
Confidence 9999999998753 33 489988 4 489999999999998753211 1 00 000 011233456779999
Q ss_pred HHh-hCCce-eCHHHHHHHHHHHHHHc
Q 026418 197 LKD-LGLEF-TPVKQCLYETVKSLQEK 221 (239)
Q Consensus 197 ~~~-lg~~p-~~~~e~i~~~~~~~~~~ 221 (239)
+++ |||+| ++++++|+++++|++..
T Consensus 345 ~~~~lGw~p~~~l~~gl~~~~~~~~~~ 371 (386)
T PLN02427 345 INKQLGWNPKTSLWDLLESTLTYQHKT 371 (386)
T ss_pred HHHhcCCCcCccHHHHHHHHHHHHHHH
Confidence 977 89999 99999999999998765
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-28 Score=199.63 Aligned_cols=207 Identities=14% Similarity=0.036 Sum_probs=159.2
Q ss_pred chhHhHHHHHHHHHHHhcCCC-----EEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKVR-----RVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~-----~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.|+.+|+++|++.+++ +|||+|| +++||.... +++|+++ ..|.+.|+.||.++|.+++.
T Consensus 107 ~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss-~~vyg~~~~----~~~E~~~------~~p~~~Y~~sK~~~e~~~~~ 175 (340)
T PLN02653 107 ADVVATGALRLLEAVRLHGQETGRQIKYYQAGS-SEMYGSTPP----PQSETTP------FHPRSPYAVAKVAAHWYTVN 175 (340)
T ss_pred HHHHHHHHHHHHHHHHHhccccccceeEEEecc-HHHhCCCCC----CCCCCCC------CCCCChhHHHHHHHHHHHHH
Confidence 468999999999999998865 8999999 599986542 5778765 35678999999999999999
Q ss_pred HHHHcCccEEEEecCcccCCCCCCCCC--hhHHHHHHHHcCCCCc--cC--CCCCCceehHHHHHHHHHhhcCCCCCceE
Q 026418 77 EAVARGVDLVVVNPVLVLGPLLQSTVN--ASIIHILKYLNGSAKT--YA--NSVQAYVHVRDVALAHILVYETPSASGRY 150 (239)
Q Consensus 77 ~~~~~~~~~~i~Rp~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~--~~--~~~~~~i~v~D~a~~~~~~~~~~~~~~~y 150 (239)
++++.++.++..|+.++|||+...... .....+.++..+.... ++ +..++|+|++|+|++++.++++.. .++|
T Consensus 176 ~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~a~a~~~~~~~~~-~~~y 254 (340)
T PLN02653 176 YREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGDYVEAMWLMLQQEK-PDDY 254 (340)
T ss_pred HHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecceeHHHHHHHHHHHHhcCC-CCcE
Confidence 998889999999999999996443221 1112234555665443 34 457899999999999999998653 4689
Q ss_pred EEe-cCCCCHHHHHHHHHHhCCCCC----CCCCCCCCCCCCCCCcccChHHHHh-hCCce-eCHHHHHHHHHHHHHHc
Q 026418 151 LCA-ESVLHRGEVVEILAKFFPEYP----IPTKCSDEKNPRKKPYKFSNQKLKD-LGLEF-TPVKQCLYETVKSLQEK 221 (239)
Q Consensus 151 ~~~-~~~~s~~el~~~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p-~~~~e~i~~~~~~~~~~ 221 (239)
|++ ++++|++|+++.+.+.+ +.+ +.................|++|+++ |||+| ++++++|+++++|+++.
T Consensus 255 ni~~g~~~s~~e~~~~i~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~p~~~l~~gi~~~~~~~~~~ 331 (340)
T PLN02653 255 VVATEESHTVEEFLEEAFGYV-GLNWKDHVEIDPRYFRPAEVDNLKGDASKAREVLGWKPKVGFEQLVKMMVDEDLEL 331 (340)
T ss_pred EecCCCceeHHHHHHHHHHHc-CCCCCcceeeCcccCCccccccccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence 887 88999999999999987 432 1111111123344566789999976 89999 99999999999998744
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.9e-28 Score=196.36 Aligned_cols=215 Identities=33% Similarity=0.417 Sum_probs=162.2
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+++|+.++.+++++|.+.+++++|++|| .++|+..... .+.+|+.+..+. .+.+.|+.+|.++|++++.+....
T Consensus 86 ~~~n~~~~~~l~~~~~~~~~~~~v~~SS-~~~~~~~~~~--~~~~e~~~~~~~---~~~~~Y~~sK~~~e~~~~~~~~~~ 159 (328)
T TIGR03466 86 YAANVEGTRNLLRAALEAGVERVVYTSS-VATLGVRGDG--TPADETTPSSLD---DMIGHYKRSKFLAEQAALEMAAEK 159 (328)
T ss_pred HHHHHHHHHHHHHHHHHhCCCeEEEEec-hhhcCcCCCC--CCcCccCCCCcc---cccChHHHHHHHHHHHHHHHHHhc
Confidence 5689999999999999999999999999 5889853211 267887664331 234679999999999999998888
Q ss_pred CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCceEEEecCCCCHHH
Q 026418 82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGE 161 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~~~~~s~~e 161 (239)
+++++++||+++||++...... ....+.....+..+.+.+...+|+|++|+|++++.++.+...+..|+++++++|+.|
T Consensus 160 ~~~~~ilR~~~~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~~~~s~~e 238 (328)
T TIGR03466 160 GLPVVIVNPSTPIGPRDIKPTP-TGRIIVDFLNGKMPAYVDTGLNLVHVDDVAEGHLLALERGRIGERYILGGENLTLKQ 238 (328)
T ss_pred CCCEEEEeCCccCCCCCCCCCc-HHHHHHHHHcCCCceeeCCCcceEEHHHHHHHHHHHHhCCCCCceEEecCCCcCHHH
Confidence 9999999999999997542211 122344455554444445567899999999999999987554448888889999999
Q ss_pred HHHHHHHhCCCCCCCCCCCCC------------------CCC---------CCCCcccChHHHHh-hCCceeCHHHHHHH
Q 026418 162 VVEILAKFFPEYPIPTKCSDE------------------KNP---------RKKPYKFSNQKLKD-LGLEFTPVKQCLYE 213 (239)
Q Consensus 162 l~~~i~~~~~~~~~~~~~~~~------------------~~~---------~~~~~~~~~~k~~~-lg~~p~~~~e~i~~ 213 (239)
+++.+.+.+ +.+.+....+. ... ......+|++|+++ |||+|++++++|.+
T Consensus 239 ~~~~i~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~i~~ 317 (328)
T TIGR03466 239 ILDKLAEIT-GRPAPRVKLPRWLLLPVAWGAEALARLTGKEPRVTVDGVRMAKKKMFFSSAKAVRELGYRQRPAREALRD 317 (328)
T ss_pred HHHHHHHHh-CCCCCCCcCCHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHhccCCCChHHHHHHcCCCCcCHHHHHHH
Confidence 999999987 33322211110 000 01356789999976 99999999999999
Q ss_pred HHHHHHHcCCC
Q 026418 214 TVKSLQEKGHL 224 (239)
Q Consensus 214 ~~~~~~~~g~~ 224 (239)
++.|++++|.|
T Consensus 318 ~~~~~~~~~~~ 328 (328)
T TIGR03466 318 AVEWFRANGYL 328 (328)
T ss_pred HHHHHHHhCCC
Confidence 99999998865
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-28 Score=197.51 Aligned_cols=211 Identities=20% Similarity=0.213 Sum_probs=161.2
Q ss_pred chhHhHHHHHHHHHHHhcCC-CEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKV-RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA 80 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v-~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 80 (239)
+++|+.++.+++++|.+.+. .++||+|| ..+||..... .+++|+++ ..|.+.|+.+|..+|.+++.++++
T Consensus 97 ~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss-~~v~g~~~~~--~~~~e~~~------~~~~~~Y~~sK~~~e~~~~~~~~~ 167 (317)
T TIGR01181 97 IETNVVGTYTLLEAVRKYWHEFRFHHIST-DEVYGDLEKG--DAFTETTP------LAPSSPYSASKAASDHLVRAYHRT 167 (317)
T ss_pred HHHHHHHHHHHHHHHHhcCCCceEEEeec-cceeCCCCCC--CCcCCCCC------CCCCCchHHHHHHHHHHHHHHHHH
Confidence 46899999999999998753 38999999 5999865432 14677765 245788999999999999999888
Q ss_pred cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCc-cC--CCCCCceehHHHHHHHHHhhcCCCCCceEEEe-cCC
Q 026418 81 RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKT-YA--NSVQAYVHVRDVALAHILVYETPSASGRYLCA-ESV 156 (239)
Q Consensus 81 ~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~ 156 (239)
.+++++++||+.+|||..... .....++..+..+..+. ++ +..++|+|++|+++++..++.+...+++||++ +++
T Consensus 168 ~~~~~~i~R~~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~ 246 (317)
T TIGR01181 168 YGLPALITRCSNNYGPYQFPE-KLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEKGRVGETYNIGGGNE 246 (317)
T ss_pred hCCCeEEEEeccccCCCCCcc-cHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHcCCCCCceEEeCCCCc
Confidence 899999999999999975432 23345566677776543 34 45679999999999999999865555599887 688
Q ss_pred CCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcccChHHHHh-hCCce-eCHHHHHHHHHHHHHHcC
Q 026418 157 LHRGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKD-LGLEF-TPVKQCLYETVKSLQEKG 222 (239)
Q Consensus 157 ~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p-~~~~e~i~~~~~~~~~~g 222 (239)
++++|+++.+.+.++..+.................+|++|+++ |||+| ++++++|.++++|+++++
T Consensus 247 ~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~~ 314 (317)
T TIGR01181 247 RTNLEVVETILELLGKDEDLITHVEDRPGHDRRYAIDASKIKRELGWAPKYTFEEGLRKTVQWYLDNE 314 (317)
T ss_pred eeHHHHHHHHHHHhCCCcccccccCCCccchhhhcCCHHHHHHHhCCCCCCcHHHHHHHHHHHHHhcc
Confidence 9999999999999843221111111122223345689999975 89999 899999999999998765
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-28 Score=199.11 Aligned_cols=210 Identities=19% Similarity=0.190 Sum_probs=158.2
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+++|+.++.+|+++|++.++++||++|| .++|+..... +++|+++. ..|.+.|+.+|..+|++++.+++..
T Consensus 97 ~~~n~~~~~~l~~~~~~~~~~~~v~~Ss-~~~yg~~~~~---~~~E~~~~-----~~p~~~Y~~sK~~~E~~~~~~~~~~ 167 (338)
T PRK10675 97 YDNNVNGTLRLISAMRAANVKNLIFSSS-ATVYGDQPKI---PYVESFPT-----GTPQSPYGKSKLMVEQILTDLQKAQ 167 (338)
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEecc-HHhhCCCCCC---ccccccCC-----CCCCChhHHHHHHHHHHHHHHHHhc
Confidence 4689999999999999999999999999 5999865443 67888763 1357889999999999999987654
Q ss_pred -CccEEEEecCcccCCCCCC------C--CChhHHHHHHHHcCCC-C--cc--------CCCCCCceehHHHHHHHHHhh
Q 026418 82 -GVDLVVVNPVLVLGPLLQS------T--VNASIIHILKYLNGSA-K--TY--------ANSVQAYVHVRDVALAHILVY 141 (239)
Q Consensus 82 -~~~~~i~Rp~~v~G~~~~~------~--~~~~~~~~~~~~~~~~-~--~~--------~~~~~~~i~v~D~a~~~~~~~ 141 (239)
+++++++|++++||+.-.. . .......+.++..+.. . .+ +.+.++|+|++|+|++++.++
T Consensus 168 ~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~~~~~~~ 247 (338)
T PRK10675 168 PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVAAM 247 (338)
T ss_pred CCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEEEeeEEHHHHHHHHHHHH
Confidence 7999999999999974210 0 1112234444554432 1 11 234689999999999999988
Q ss_pred cCC--CCC-ceEEEe-cCCCCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcccChHHHHh-hCCce-eCHHHHHHHHH
Q 026418 142 ETP--SAS-GRYLCA-ESVLHRGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKD-LGLEF-TPVKQCLYETV 215 (239)
Q Consensus 142 ~~~--~~~-~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p-~~~~e~i~~~~ 215 (239)
... ... ++||++ ++.+|+.|+++.+.+.+ +.+.+....+..........+|++|+++ +||+| ++++++|++++
T Consensus 248 ~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~-g~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~~~~~~~~ 326 (338)
T PRK10675 248 EKLANKPGVHIYNLGAGVGSSVLDVVNAFSKAC-GKPVNYHFAPRREGDLPAYWADASKADRELNWRVTRTLDEMAQDTW 326 (338)
T ss_pred HhhhccCCCceEEecCCCceeHHHHHHHHHHHh-CCCCCeeeCCCCCCchhhhhcCHHHHHHHhCCCCcCcHHHHHHHHH
Confidence 742 223 489887 78899999999999997 5444444333333334567789999976 89999 99999999999
Q ss_pred HHHHHc
Q 026418 216 KSLQEK 221 (239)
Q Consensus 216 ~~~~~~ 221 (239)
+|+.++
T Consensus 327 ~~~~~~ 332 (338)
T PRK10675 327 HWQSRH 332 (338)
T ss_pred HHHHhh
Confidence 999774
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-27 Score=193.10 Aligned_cols=205 Identities=17% Similarity=0.132 Sum_probs=153.7
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH--
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV-- 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-- 79 (239)
+++|+.++.+|+++|+++++ +|||+|| .++|+.... +.+|+++. ..|.+.|+.+|..+|.+++++..
T Consensus 88 ~~~n~~~~~~ll~~~~~~~~-~~v~~SS-~~vy~~~~~----~~~e~~~~-----~~p~~~Y~~sK~~~e~~~~~~~~~~ 156 (314)
T TIGR02197 88 MENNYQYSKRLLDWCAEKGI-PFIYASS-AATYGDGEA----GFREGREL-----ERPLNVYGYSKFLFDQYVRRRVLPE 156 (314)
T ss_pred HHHHHHHHHHHHHHHHHhCC-cEEEEcc-HHhcCCCCC----CcccccCc-----CCCCCHHHHHHHHHHHHHHHHhHhh
Confidence 46899999999999999987 7999999 599986532 45665432 13678899999999999987643
Q ss_pred HcCccEEEEecCcccCCCCCCCC---ChhHHHHHHHHcCCCCcc---------CCCCCCceehHHHHHHHHHhhcCCCCC
Q 026418 80 ARGVDLVVVNPVLVLGPLLQSTV---NASIIHILKYLNGSAKTY---------ANSVQAYVHVRDVALAHILVYETPSAS 147 (239)
Q Consensus 80 ~~~~~~~i~Rp~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~---------~~~~~~~i~v~D~a~~~~~~~~~~~~~ 147 (239)
..+++++++||+.+|||+..... .....++.++..+..+.+ |+..++|+|++|+++++..++.. ...
T Consensus 157 ~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~~~~~-~~~ 235 (314)
T TIGR02197 157 ALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLWLLEN-GVS 235 (314)
T ss_pred ccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHHHHHhc-ccC
Confidence 23679999999999999864321 223345566666665432 23457899999999999999987 445
Q ss_pred ceEEEe-cCCCCHHHHHHHHHHhCCCCCCCCCC--CCCC--CCCCCCcccChHHHHh-hCCce-eCHHHHHHHHHHHHH
Q 026418 148 GRYLCA-ESVLHRGEVVEILAKFFPEYPIPTKC--SDEK--NPRKKPYKFSNQKLKD-LGLEF-TPVKQCLYETVKSLQ 219 (239)
Q Consensus 148 ~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~k~~~-lg~~p-~~~~e~i~~~~~~~~ 219 (239)
++||++ ++++|++|+++.+.+.+ +.+..... .+.. ........+|++|+++ +||+| ++++++|+++++|++
T Consensus 236 ~~yni~~~~~~s~~e~~~~i~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l~~~p~~~l~~~l~~~~~~~~ 313 (314)
T TIGR02197 236 GIFNLGTGRARSFNDLADAVFKAL-GKDEKIEYIPMPEALRGKYQYFTQADITKLRAAGYYGPFTTLEEGVKDYVQWLL 313 (314)
T ss_pred ceEEcCCCCCccHHHHHHHHHHHh-CCCCcceeccCccccccccccccccchHHHHHhcCCCCcccHHHHHHHHHHHHh
Confidence 699987 78999999999999997 33322111 1111 1122345789999977 79999 999999999999985
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-27 Score=189.82 Aligned_cols=199 Identities=14% Similarity=0.078 Sum_probs=149.0
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+++|+.++.+|+++|++.++ +|||+|| +.+|+..... |++|+++ ..|.+.|+.+|..+|++++.+.
T Consensus 78 ~~~N~~~~~~l~~aa~~~g~-~~v~~Ss-~~Vy~~~~~~---p~~E~~~------~~P~~~Yg~sK~~~E~~~~~~~--- 143 (299)
T PRK09987 78 QLLNATSVEAIAKAANEVGA-WVVHYST-DYVFPGTGDI---PWQETDA------TAPLNVYGETKLAGEKALQEHC--- 143 (299)
T ss_pred HHHHHHHHHHHHHHHHHcCC-eEEEEcc-ceEECCCCCC---CcCCCCC------CCCCCHHHHHHHHHHHHHHHhC---
Confidence 36899999999999999996 7999999 6999866443 7888876 3578899999999999997763
Q ss_pred CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCc-cCC----CCCCceehHHHHHHHHHhhcCCCCCceEEEe-cC
Q 026418 82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKT-YAN----SVQAYVHVRDVALAHILVYETPSASGRYLCA-ES 155 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~ 155 (239)
.+.+++|++++|||+.. .....++..+.+++.+. +++ ..+++.+++|++.++..++......|+||++ ++
T Consensus 144 -~~~~ilR~~~vyGp~~~---~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~~~~~~giyni~~~~ 219 (299)
T PRK09987 144 -AKHLIFRTSWVYAGKGN---NFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVASG 219 (299)
T ss_pred -CCEEEEecceecCCCCC---CHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhccCCCCCeEEeeCCC
Confidence 46799999999999642 23334555555666544 343 2345667788888888877655445799887 78
Q ss_pred CCCHHHHHHHHHHhCC--CCCCC--------CCCCCCCCCCCCCcccChHHHHh-hCCceeCHHHHHHHHHHHH
Q 026418 156 VLHRGEVVEILAKFFP--EYPIP--------TKCSDEKNPRKKPYKFSNQKLKD-LGLEFTPVKQCLYETVKSL 218 (239)
Q Consensus 156 ~~s~~el~~~i~~~~~--~~~~~--------~~~~~~~~~~~~~~~~~~~k~~~-lg~~p~~~~e~i~~~~~~~ 218 (239)
.+|+.|+++.+.+.+. +...+ ....+.....+....+|++|+++ |||+|.+|+++|+++++.+
T Consensus 220 ~~s~~e~~~~i~~~~~~~g~~~~~~~i~~~~~~~~~~~~~rp~~~~ld~~k~~~~lg~~~~~~~~~l~~~~~~~ 293 (299)
T PRK09987 220 TTTWHDYAALVFEEARKAGITLALNKLNAVPTSAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLTEL 293 (299)
T ss_pred CccHHHHHHHHHHHHHhcCCCcCcCeeeecchhhcCCCCCCCCcccCCHHHHHHHhCCCCccHHHHHHHHHHHH
Confidence 8999999999977531 22211 11112233456778999999987 8999999999999998765
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.4e-27 Score=190.24 Aligned_cols=210 Identities=25% Similarity=0.270 Sum_probs=162.7
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCC-CCChhhcccCCchHHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESC-WSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA 80 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~-~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 80 (239)
+++|+.+|.+++++|++.++++|||.||. ++|+.... ..+++|+. + ..|.++|+.+|.++|+.++.+.+.
T Consensus 89 ~~~nv~gt~~ll~aa~~~~~~~~v~~ss~-~~~~~~~~--~~~~~E~~~~------~~p~~~Yg~sK~~~E~~~~~~~~~ 159 (314)
T COG0451 89 LDVNVDGTLNLLEAARAAGVKRFVFASSV-SVVYGDPP--PLPIDEDLGP------PRPLNPYGVSKLAAEQLLRAYARL 159 (314)
T ss_pred HHHHHHHHHHHHHHHHHcCCCeEEEeCCC-ceECCCCC--CCCcccccCC------CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 46899999999999999889999998885 66654421 12678873 3 355669999999999999999887
Q ss_pred cCccEEEEecCcccCCCCCCCCC--hhHHHHHHHHcCCC-Ccc-C--CCCCCceehHHHHHHHHHhhcCCCCCceEEEe-
Q 026418 81 RGVDLVVVNPVLVLGPLLQSTVN--ASIIHILKYLNGSA-KTY-A--NSVQAYVHVRDVALAHILVYETPSASGRYLCA- 153 (239)
Q Consensus 81 ~~~~~~i~Rp~~v~G~~~~~~~~--~~~~~~~~~~~~~~-~~~-~--~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~- 153 (239)
.+++++++||+++|||++..... .....+..+.++.+ ... + ...++++|++|++++++.+++++... +||++
T Consensus 160 ~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~-~~ni~~ 238 (314)
T COG0451 160 YGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPDGG-VFNIGS 238 (314)
T ss_pred hCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHHhCCCCc-EEEeCC
Confidence 89999999999999999776522 22234555666765 333 3 34568999999999999999987666 99988
Q ss_pred cC-CCCHHHHHHHHHHhCCCCCCC-CCCCC--CCCCCCCCcccChHHHHh-hCCce-eCHHHHHHHHHHHHHHcC
Q 026418 154 ES-VLHRGEVVEILAKFFPEYPIP-TKCSD--EKNPRKKPYKFSNQKLKD-LGLEF-TPVKQCLYETVKSLQEKG 222 (239)
Q Consensus 154 ~~-~~s~~el~~~i~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~k~~~-lg~~p-~~~~e~i~~~~~~~~~~g 222 (239)
+. .+++.|+++.+.+.+ +...+ ....+ ..........+|.+|++. |||+| .++++++.+++.|+....
T Consensus 239 ~~~~~~~~e~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~~~~~~~i~~~~~~~~~~~ 312 (314)
T COG0451 239 GTAEITVRELAEAVAEAV-GSKAPLIVYIPLGRRGDLREGKLLDISKARAALGWEPKVSLEEGLADTLEWLLKKL 312 (314)
T ss_pred CCCcEEHHHHHHHHHHHh-CCCCcceeecCCCCCCcccccccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhh
Confidence 54 799999999999997 33322 22222 234455678889999865 99999 899999999999997654
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-27 Score=194.35 Aligned_cols=199 Identities=34% Similarity=0.566 Sum_probs=153.1
Q ss_pred chhHhHHHHHHHHHHHhc-CCCEEEEccchh-hhccCCCC-CCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA-KVRRVVFTSSIG-AVYMDPNR-SPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA 78 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~-~v~~~i~~Ss~~-~vy~~~~~-~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~ 78 (239)
.++|+.++.+++++|++. ++++|||+||.+ .+|+.... .....++|+++.....+..|.++|+.+|..+|++++.++
T Consensus 152 ~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~ 231 (367)
T PLN02686 152 AELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAA 231 (367)
T ss_pred hhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHH
Confidence 467999999999999987 699999999953 47764211 101257787765544445677889999999999999998
Q ss_pred HHcCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC---CCCceEEEecC
Q 026418 79 VARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP---SASGRYLCAES 155 (239)
Q Consensus 79 ~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~---~~~~~y~~~~~ 155 (239)
+..|++++++||+++|||+...... ..+.+++++....++++.++|+||+|+|++++++++.. ..+++|++++.
T Consensus 232 ~~~gl~~v~lRp~~vyGp~~~~~~~---~~~~~~~~g~~~~~g~g~~~~v~V~Dva~A~~~al~~~~~~~~~~~yi~~g~ 308 (367)
T PLN02686 232 RGKGLKLATICPALVTGPGFFRRNS---TATIAYLKGAQEMLADGLLATADVERLAEAHVCVYEAMGNKTAFGRYICFDH 308 (367)
T ss_pred HhcCceEEEEcCCceECCCCCCCCC---hhHHHHhcCCCccCCCCCcCeEEHHHHHHHHHHHHhccCCCCCCCcEEEeCC
Confidence 8889999999999999997543211 12335556655556778888999999999999999752 23348877799
Q ss_pred CCCHHHHHHHHHHhCCCCCCCCCCCCCC-CCCCCCcccChHHHHh-hCCce
Q 026418 156 VLHRGEVVEILAKFFPEYPIPTKCSDEK-NPRKKPYKFSNQKLKD-LGLEF 204 (239)
Q Consensus 156 ~~s~~el~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~k~~~-lg~~p 204 (239)
.++++|+++.+.+.+ +.+.+....+.. ......+.+|++|+++ |||+|
T Consensus 309 ~~s~~e~~~~i~~~~-g~~~~~~~~~~~~~~d~~~~~~d~~kl~~~l~~~~ 358 (367)
T PLN02686 309 VVSREDEAEELARQI-GLPINKIAGNSSSDDTPARFELSNKKLSRLMSRTR 358 (367)
T ss_pred CccHHHHHHHHHHHc-CCCCCcCCCchhhcCCcccccccHHHHHHHHHHhh
Confidence 999999999999997 555554444434 5667889999999976 89998
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.95 E-value=7e-27 Score=186.96 Aligned_cols=194 Identities=36% Similarity=0.587 Sum_probs=146.1
Q ss_pred chhHhHHHHHHHHHHHhc-CCCEEEEccchhhhc-cCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA-KVRRVVFTSSIGAVY-MDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~-~v~~~i~~Ss~~~vy-~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.|+.+++++|.+. +++++|++||.++++ +.....+..+++|++|.....+..+...|+.||..+|++++.+++
T Consensus 100 ~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~ 179 (297)
T PLN02583 100 VDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAM 179 (297)
T ss_pred HHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHH
Confidence 678999999999999987 589999999964432 311111223688887755543333445799999999999999988
Q ss_pred HcCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCceEEEecCCCC-
Q 026418 80 ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLH- 158 (239)
Q Consensus 80 ~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~~~~~s- 158 (239)
+.+++++++||++||||...... ..+.+....++++.+.||||+|+|++++++++.+...++|+|++..++
T Consensus 180 ~~gi~~v~lrp~~v~Gp~~~~~~--------~~~~~~~~~~~~~~~~~v~V~Dva~a~~~al~~~~~~~r~~~~~~~~~~ 251 (297)
T PLN02583 180 DRGVNMVSINAGLLMGPSLTQHN--------PYLKGAAQMYENGVLVTVDVNFLVDAHIRAFEDVSSYGRYLCFNHIVNT 251 (297)
T ss_pred HhCCcEEEEcCCcccCCCCCCch--------hhhcCCcccCcccCcceEEHHHHHHHHHHHhcCcccCCcEEEecCCCcc
Confidence 88999999999999999754321 133344344556678899999999999999997777679999976655
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcccChHHHHhhCCce
Q 026418 159 RGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKDLGLEF 204 (239)
Q Consensus 159 ~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~p 204 (239)
+.++++++.+.+|+.+++..... .........++++|+++||+++
T Consensus 252 ~~~~~~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~k~~~l~~~~ 296 (297)
T PLN02583 252 EEDAVKLAQMLSPLIPSPPPYEM-QGSEVYQQRIRNKKLNKLMEDF 296 (297)
T ss_pred HHHHHHHHHHhCCCCCCCCcccc-cCCCccccccChHHHHHhCccc
Confidence 67899999999998877654321 1223356789999999999874
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-26 Score=187.67 Aligned_cols=209 Identities=21% Similarity=0.233 Sum_probs=155.2
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHH-
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA- 80 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 80 (239)
++.|+.++.+++++|.+.+++++|++|| .++|+..... +++|+++. .|.+.|+.+|..+|.+++.++++
T Consensus 94 ~~~n~~~~~~l~~~~~~~~~~~~v~~ss-~~~~g~~~~~---~~~e~~~~------~~~~~y~~sK~~~e~~~~~~~~~~ 163 (328)
T TIGR01179 94 YRNNVVNTLNLLEAMQQTGVKKFIFSSS-AAVYGEPSSI---PISEDSPL------GPINPYGRSKLMSERILRDLSKAD 163 (328)
T ss_pred hhhhHHHHHHHHHHHHhcCCCEEEEecc-hhhcCCCCCC---CccccCCC------CCCCchHHHHHHHHHHHHHHHHhc
Confidence 4689999999999999999899999999 4899765443 67887763 45788999999999999999876
Q ss_pred cCccEEEEecCcccCCCCCCC-------CChhHHHHHHHHcC--CCC-------c--cCCCCCCceehHHHHHHHHHhhc
Q 026418 81 RGVDLVVVNPVLVLGPLLQST-------VNASIIHILKYLNG--SAK-------T--YANSVQAYVHVRDVALAHILVYE 142 (239)
Q Consensus 81 ~~~~~~i~Rp~~v~G~~~~~~-------~~~~~~~~~~~~~~--~~~-------~--~~~~~~~~i~v~D~a~~~~~~~~ 142 (239)
.+++++++||+.+||+..... .......+.....+ ..+ . .++..++|||++|+++++..++.
T Consensus 164 ~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~a~~~~~~~~ 243 (328)
T TIGR01179 164 PGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDLADAHLAALE 243 (328)
T ss_pred cCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHHHHHHHHHHh
Confidence 799999999999999864221 11112222222221 111 1 13455789999999999999987
Q ss_pred CC---CCCceEEEe-cCCCCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcccChHHHHh-hCCce-eC-HHHHHHHHH
Q 026418 143 TP---SASGRYLCA-ESVLHRGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKD-LGLEF-TP-VKQCLYETV 215 (239)
Q Consensus 143 ~~---~~~~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p-~~-~~e~i~~~~ 215 (239)
+. ..+++||++ ++++|++|+++.+.+.+ +.+.+....+...........|++|+++ |||+| ++ ++++|++++
T Consensus 244 ~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~~~~l~~~~~~~~ 322 (328)
T TIGR01179 244 YLLNGGESHVYNLGYGQGFSVLEVIEAFKKVS-GVDFPVELAPRRPGDPASLVADASKIRRELGWQPKYTDLEIIIKTAW 322 (328)
T ss_pred hhhcCCCcceEEcCCCCcccHHHHHHHHHHHh-CCCcceEeCCCCCccccchhcchHHHHHHhCCCCCcchHHHHHHHHH
Confidence 53 223499887 78999999999999997 5544433222222233456679999976 89999 66 999999999
Q ss_pred HHHHHc
Q 026418 216 KSLQEK 221 (239)
Q Consensus 216 ~~~~~~ 221 (239)
+|+.++
T Consensus 323 ~~~~~~ 328 (328)
T TIGR01179 323 RWESRN 328 (328)
T ss_pred HHHhcC
Confidence 999764
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-26 Score=183.45 Aligned_cols=199 Identities=17% Similarity=0.119 Sum_probs=150.8
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+++|+.++.+++++|++.+. +||++|| .++|+..... +++|+++. .|.+.|+.+|..+|++++.+
T Consensus 74 ~~~n~~~~~~l~~~~~~~~~-~~v~~Ss-~~vy~~~~~~---~~~E~~~~------~~~~~Y~~~K~~~E~~~~~~---- 138 (287)
T TIGR01214 74 FAVNALAPQNLARAAARHGA-RLVHIST-DYVFDGEGKR---PYREDDAT------NPLNVYGQSKLAGEQAIRAA---- 138 (287)
T ss_pred HHHHHHHHHHHHHHHHHcCC-eEEEEee-eeeecCCCCC---CCCCCCCC------CCcchhhHHHHHHHHHHHHh----
Confidence 56899999999999999885 8999999 5999765443 78888763 45788999999999999765
Q ss_pred CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCc-cCCCCCCceehHHHHHHHHHhhcCC-CCCceEEEe-cCCCC
Q 026418 82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKT-YANSVQAYVHVRDVALAHILVYETP-SASGRYLCA-ESVLH 158 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~D~a~~~~~~~~~~-~~~~~y~~~-~~~~s 158 (239)
+++++++||+++||+.... .....++..+..+.... .++..++++|++|+|+++..++..+ ..+++||++ ++.+|
T Consensus 139 ~~~~~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~ni~~~~~~s 216 (287)
T TIGR01214 139 GPNALIVRTSWLYGGGGGR--NFVRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVIAALLQRLARARGVYHLANSGQCS 216 (287)
T ss_pred CCCeEEEEeeecccCCCCC--CHHHHHHHHhhcCCCceEecCCCcCCcCHHHHHHHHHHHHhhccCCCCeEEEECCCCcC
Confidence 6899999999999997422 22334455555555443 4667789999999999999999876 345699887 78899
Q ss_pred HHHHHHHHHHhCCCCCCCCC-------C---CCCCCCCCCCcccChHHHHh-hCCceeCHHHHHHHHHHH
Q 026418 159 RGEVVEILAKFFPEYPIPTK-------C---SDEKNPRKKPYKFSNQKLKD-LGLEFTPVKQCLYETVKS 217 (239)
Q Consensus 159 ~~el~~~i~~~~~~~~~~~~-------~---~~~~~~~~~~~~~~~~k~~~-lg~~p~~~~e~i~~~~~~ 217 (239)
+.|+++.+.+.++....... . ............+|++|+++ |||.+++++++|.++++.
T Consensus 217 ~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~lg~~~~~~~~~l~~~~~~ 286 (287)
T TIGR01214 217 WYEFAQAIFEEAGADGLLLHPQEVKPISSKEYPRPARRPAYSVLDNTKLVKTLGTPLPHWREALRAYLQE 286 (287)
T ss_pred HHHHHHHHHHHhCcccccccCceeEeecHHHcCCCCCCCCccccchHHHHHHcCCCCccHHHHHHHHHhh
Confidence 99999999999843221100 0 01111223456899999987 899779999999998753
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=9e-26 Score=186.32 Aligned_cols=203 Identities=17% Similarity=0.160 Sum_probs=151.1
Q ss_pred HhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHcCcc
Q 026418 5 AVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVARGVD 84 (239)
Q Consensus 5 Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~ 84 (239)
++.++++|+++|++.|+++|||+|| .++|+..... +..|+++.. | +. +|..+|.+++ +.+++
T Consensus 141 ~~~~~~~ll~aa~~~gvkr~V~~SS-~~vyg~~~~~---p~~E~~~~~------p---~~-sK~~~E~~l~----~~~l~ 202 (378)
T PLN00016 141 DLDEVEPVADWAKSPGLKQFLFCSS-AGVYKKSDEP---PHVEGDAVK------P---KA-GHLEVEAYLQ----KLGVN 202 (378)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEcc-HhhcCCCCCC---CCCCCCcCC------C---cc-hHHHHHHHHH----HcCCC
Confidence 3678999999999999999999999 5999875543 566665422 2 22 8999998875 35899
Q ss_pred EEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCcc-C--CCCCCceehHHHHHHHHHhhcCCCCC-ceEEEe-cCCCCH
Q 026418 85 LVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY-A--NSVQAYVHVRDVALAHILVYETPSAS-GRYLCA-ESVLHR 159 (239)
Q Consensus 85 ~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~i~v~D~a~~~~~~~~~~~~~-~~y~~~-~~~~s~ 159 (239)
++++||+++||+..... ....++.++..+.+..+ + ...++|+|++|+|++++.++.++... ++||++ ++.+|+
T Consensus 203 ~~ilRp~~vyG~~~~~~--~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~~yni~~~~~~s~ 280 (378)
T PLN00016 203 WTSFRPQYIYGPGNNKD--CEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNPKAAGQIFNIVSDRAVTF 280 (378)
T ss_pred eEEEeceeEECCCCCCc--hHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHHHhcCccccCCEEEecCCCccCH
Confidence 99999999999975432 22234566777766543 3 44678999999999999999876443 489887 678999
Q ss_pred HHHHHHHHHhCCCCCCCCCC-CCCC---------CCCCCCcccChHHHHh-hCCce-eCHHHHHHHHHHHHHHcCCCCCC
Q 026418 160 GEVVEILAKFFPEYPIPTKC-SDEK---------NPRKKPYKFSNQKLKD-LGLEF-TPVKQCLYETVKSLQEKGHLPIP 227 (239)
Q Consensus 160 ~el~~~i~~~~~~~~~~~~~-~~~~---------~~~~~~~~~~~~k~~~-lg~~p-~~~~e~i~~~~~~~~~~g~~~~~ 227 (239)
.|+++.+.+.+ +.+..... .+.. .........|++|+++ |||+| ++++|+|.++++|++..|..++.
T Consensus 281 ~el~~~i~~~~-g~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~d~~ka~~~LGw~p~~~l~egl~~~~~~~~~~~~~~~~ 359 (378)
T PLN00016 281 DGMAKACAKAA-GFPEEIVHYDPKAVGFGAKKAFPFRDQHFFASPRKAKEELGWTPKFDLVEDLKDRYELYFGRGRDRKE 359 (378)
T ss_pred HHHHHHHHHHh-CCCCceeecCccccCccccccccccccccccCHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCCccc
Confidence 99999999987 43322111 1100 0112344579999976 89999 89999999999999999988665
Q ss_pred c
Q 026418 228 T 228 (239)
Q Consensus 228 ~ 228 (239)
.
T Consensus 360 ~ 360 (378)
T PLN00016 360 A 360 (378)
T ss_pred c
Confidence 3
|
|
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.95 E-value=7e-27 Score=170.80 Aligned_cols=215 Identities=20% Similarity=0.234 Sum_probs=170.6
Q ss_pred CchhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHH
Q 026418 1 MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA 80 (239)
Q Consensus 1 ~~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 80 (239)
+++.|+...-|++..|.++|+++++++.|+ .+|.+.-.. |++|+....... ......|+..|+++.-.-+.|..+
T Consensus 79 F~r~Nl~indNVlhsa~e~gv~K~vsclSt-CIfPdkt~y---PIdEtmvh~gpp-hpsN~gYsyAKr~idv~n~aY~~q 153 (315)
T KOG1431|consen 79 FIRKNLQINDNVLHSAHEHGVKKVVSCLST-CIFPDKTSY---PIDETMVHNGPP-HPSNFGYSYAKRMIDVQNQAYRQQ 153 (315)
T ss_pred HHhhcceechhHHHHHHHhchhhhhhhcce-eecCCCCCC---CCCHHHhccCCC-CCCchHHHHHHHHHHHHHHHHHHH
Confidence 467899999999999999999999999994 999776555 899987654421 122345999999999888999999
Q ss_pred cCccEEEEecCcccCCCCCCCC---ChhHHHHHHHH----cCC-C-CccCCC--CCCceehHHHHHHHHHhhcCCCCCc-
Q 026418 81 RGVDLVVVNPVLVLGPLLQSTV---NASIIHILKYL----NGS-A-KTYANS--VQAYVHVRDVALAHILVYETPSASG- 148 (239)
Q Consensus 81 ~~~~~~i~Rp~~v~G~~~~~~~---~~~~~~~~~~~----~~~-~-~~~~~~--~~~~i~v~D~a~~~~~~~~~~~~~~- 148 (239)
.|.+++.+-|.++|||+++.+. ..+..+++++- +|. . ..||.| .+.|+|++|+|+++++++++-..-.
T Consensus 154 hg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l~i~vlr~Y~~vEp 233 (315)
T KOG1431|consen 154 HGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADLFIWVLREYEGVEP 233 (315)
T ss_pred hCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHHHHHHHHhhcCccc
Confidence 9999999999999999987642 23445554433 233 2 236654 6889999999999999998654434
Q ss_pred eEEEecC--CCCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcccChHHHHhhCCce--eCHHHHHHHHHHHHHHc
Q 026418 149 RYLCAES--VLHRGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKDLGLEF--TPVKQCLYETVKSLQEK 221 (239)
Q Consensus 149 ~y~~~~~--~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~p--~~~~e~i~~~~~~~~~~ 221 (239)
+...+|+ .+|++|+++++.+.+ ++.....+.....+.......|++|++.|+|.| ++++++|.++++||.++
T Consensus 234 iils~ge~~EVtI~e~aeaV~ea~-~F~G~l~~DttK~DGq~kKtasnsKL~sl~pd~~ft~l~~ai~~t~~Wy~~N 309 (315)
T KOG1431|consen 234 IILSVGESDEVTIREAAEAVVEAV-DFTGKLVWDTTKSDGQFKKTASNSKLRSLLPDFKFTPLEQAISETVQWYLDN 309 (315)
T ss_pred eEeccCccceeEHHHHHHHHHHHh-CCCceEEeeccCCCCCcccccchHHHHHhCCCcccChHHHHHHHHHHHHHHh
Confidence 4444465 899999999999997 776666666666777888999999999999998 66999999999999875
|
|
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.8e-26 Score=175.45 Aligned_cols=213 Identities=20% Similarity=0.195 Sum_probs=172.1
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+..|+.||.|||++|++++++.+||.|| +++||.+..- |++|+++.+ +|.++|+.+|...|+++..+....
T Consensus 101 ~~nNi~gtlnlLe~~~~~~~~~~V~sss-atvYG~p~~i---p~te~~~t~-----~p~~pyg~tK~~iE~i~~d~~~~~ 171 (343)
T KOG1371|consen 101 YHNNIAGTLNLLEVMKAHNVKALVFSSS-ATVYGLPTKV---PITEEDPTD-----QPTNPYGKTKKAIEEIIHDYNKAY 171 (343)
T ss_pred eehhhhhHHHHHHHHHHcCCceEEEecc-eeeecCccee---eccCcCCCC-----CCCCcchhhhHHHHHHHHhhhccc
Confidence 4679999999999999999999999999 6999998775 899998864 268999999999999999999988
Q ss_pred CccEEEEecCcccC--CC----CCCC-CC-hhHHHHHHHHcCCC---------Cc--cCCCCCCceehHHHHHHHHHhhc
Q 026418 82 GVDLVVVNPVLVLG--PL----LQST-VN-ASIIHILKYLNGSA---------KT--YANSVQAYVHVRDVALAHILVYE 142 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G--~~----~~~~-~~-~~~~~~~~~~~~~~---------~~--~~~~~~~~i~v~D~a~~~~~~~~ 142 (239)
+..++.||.++++| |. +.+. .. .....+....-++. .. .|+..++++|+-|+|+.++.+++
T Consensus 172 ~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~t~dgt~vrdyi~v~Dla~~h~~al~ 251 (343)
T KOG1371|consen 172 GWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYTTIDGTIVRDYIHVLDLADGHVAALG 251 (343)
T ss_pred cceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCcccccCCCeeecceeeEehHHHHHHHhh
Confidence 99999999999999 32 2110 00 00001122222221 11 24678999999999999999998
Q ss_pred CCCC---CceEEEe-cCCCCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcccChHHH-HhhCCce-eCHHHHHHHHHH
Q 026418 143 TPSA---SGRYLCA-ESVLHRGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKL-KDLGLEF-TPVKQCLYETVK 216 (239)
Q Consensus 143 ~~~~---~~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~-~~lg~~p-~~~~e~i~~~~~ 216 (239)
.... .++||++ +...++.++..++++.. +..++....+.+..+....+.+.+++ ++|||+| +.++++++++++
T Consensus 252 k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~-g~~~k~~~v~~R~gdv~~~ya~~~~a~~elgwk~~~~iee~c~dlw~ 330 (343)
T KOG1371|consen 252 KLRGAAEFGVYNLGTGKGSSVLELVTAFEKAL-GVKIKKKVVPRRNGDVAFVYANPSKAQRELGWKAKYGLQEMLKDLWR 330 (343)
T ss_pred ccccchheeeEeecCCCCccHHHHHHHHHHHh-cCCCCccccCCCCCCceeeeeChHHHHHHhCCccccCHHHHHHHHHH
Confidence 7654 2399888 88899999999999996 88888887777888888999999987 5699999 999999999999
Q ss_pred HHHHcCCC
Q 026418 217 SLQEKGHL 224 (239)
Q Consensus 217 ~~~~~g~~ 224 (239)
|..++..-
T Consensus 331 W~~~np~g 338 (343)
T KOG1371|consen 331 WQKQNPSG 338 (343)
T ss_pred HHhcCCCc
Confidence 99877553
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.8e-25 Score=176.29 Aligned_cols=199 Identities=23% Similarity=0.238 Sum_probs=140.8
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+++|+.++.+|+++|.+.++ ++||+|| ..||+...+. +++|+++ ..|.+.||++|+++|+.+++..
T Consensus 75 ~~iN~~~~~~la~~~~~~~~-~li~~ST-d~VFdG~~~~---~y~E~d~------~~P~~~YG~~K~~~E~~v~~~~--- 140 (286)
T PF04321_consen 75 YAINVDATKNLAEACKERGA-RLIHIST-DYVFDGDKGG---PYTEDDP------PNPLNVYGRSKLEGEQAVRAAC--- 140 (286)
T ss_dssp HHHHTHHHHHHHHHHHHCT--EEEEEEE-GGGS-SSTSS---SB-TTS----------SSHHHHHHHHHHHHHHHH----
T ss_pred HHHhhHHHHHHHHHHHHcCC-cEEEeec-cEEEcCCccc---ccccCCC------CCCCCHHHHHHHHHHHHHHHhc---
Confidence 46899999999999999996 8999999 6999766554 7888877 3678999999999999998743
Q ss_pred CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCc-cCCCCCCceehHHHHHHHHHhhcCCCC----CceEEEe-cC
Q 026418 82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKT-YANSVQAYVHVRDVALAHILVYETPSA----SGRYLCA-ES 155 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~D~a~~~~~~~~~~~~----~~~y~~~-~~ 155 (239)
-+.+|+|++.+||+. ..+....++..+..++.+. ..+..+..+|++|+|+++..++++... .|+||++ ++
T Consensus 141 -~~~~IlR~~~~~g~~---~~~~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i~~l~~~~~~~~~~~Giyh~~~~~ 216 (286)
T PF04321_consen 141 -PNALILRTSWVYGPS---GRNFLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVILELIEKNLSGASPWGIYHLSGPE 216 (286)
T ss_dssp -SSEEEEEE-SEESSS---SSSHHHHHHHHHHCTSEEEEESSCEE--EEHHHHHHHHHHHHHHHHH-GGG-EEEE---BS
T ss_pred -CCEEEEecceecccC---CCchhhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHHHHHHHhcccccccceeEEEecCc
Confidence 489999999999993 2234445556666777665 456677899999999999999986543 5799887 68
Q ss_pred CCCHHHHHHHHHHhCCCCC-----CCCCCCCCCCCCCCCcccChHHHHh-hCCceeCHHHHHHHHHHHH
Q 026418 156 VLHRGEVVEILAKFFPEYP-----IPTKCSDEKNPRKKPYKFSNQKLKD-LGLEFTPVKQCLYETVKSL 218 (239)
Q Consensus 156 ~~s~~el~~~i~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p~~~~e~i~~~~~~~ 218 (239)
.+|+.|+++.+++.++... ++..........+.+..+|++|++. +|+++.+++++|+++++.+
T Consensus 217 ~~S~~e~~~~i~~~~~~~~~~i~~~~~~~~~~~~~rp~~~~L~~~kl~~~~g~~~~~~~~~l~~~~~~~ 285 (286)
T PF04321_consen 217 RVSRYEFAEAIAKILGLDPELIKPVSSSEFPRAAPRPRNTSLDCRKLKNLLGIKPPPWREGLEELVKQY 285 (286)
T ss_dssp -EEHHHHHHHHHHHHTHCTTEEEEESSTTSTTSSGS-SBE-B--HHHHHCTTS---BHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHhCCCCceEEecccccCCCCCCCCCcccccHHHHHHccCCCCcCHHHHHHHHHHHh
Confidence 8999999999999973111 1112222334456788999999987 7999999999999998876
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-24 Score=171.61 Aligned_cols=168 Identities=29% Similarity=0.298 Sum_probs=123.7
Q ss_pred CchhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCC-CCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 1 MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPN-RSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 1 ~~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~-~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
++++|+.||+||+++|+++++++|||+||. +++++.. ..+-...+|+.+... .+.+.|+.||.++|++++++..
T Consensus 88 ~~~vNV~GT~nvl~aa~~~~VkrlVytSS~-~vv~~~~~~~~~~~~dE~~~~~~----~~~~~Y~~SK~~AE~~V~~a~~ 162 (280)
T PF01073_consen 88 YYKVNVDGTRNVLEAARKAGVKRLVYTSSI-SVVFDNYKGDPIINGDEDTPYPS----SPLDPYAESKALAEKAVLEANG 162 (280)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEEEcCc-ceeEeccCCCCcccCCcCCcccc----cccCchHHHHHHHHHHHHhhcc
Confidence 367999999999999999999999999996 6666522 222222456654322 4678899999999999999765
Q ss_pred ---H--cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCC-CccC--CCCCCceehHHHHHHHHHhhcC-------C
Q 026418 80 ---A--RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSA-KTYA--NSVQAYVHVRDVALAHILVYET-------P 144 (239)
Q Consensus 80 ---~--~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~i~v~D~a~~~~~~~~~-------~ 144 (239)
+ ..+..+++||+.||||++..... ..+.....|.. ...+ ....+++||+|+|.+++++++. .
T Consensus 163 ~~~~~g~~l~t~~lRP~~IyGp~d~~~~~---~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~~L~~~~~~~ 239 (280)
T PF01073_consen 163 SELKNGGRLRTCALRPAGIYGPGDQRLVP---RLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQALLEPGKPE 239 (280)
T ss_pred cccccccceeEEEEeccEEeCcccccccc---hhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHHHhccccccc
Confidence 1 24999999999999998654322 23344444533 2233 4568999999999999988653 2
Q ss_pred CCCc-eEEEe-cCCCC-HHHHHHHHHHhCCCCCCCC
Q 026418 145 SASG-RYLCA-ESVLH-RGEVVEILAKFFPEYPIPT 177 (239)
Q Consensus 145 ~~~~-~y~~~-~~~~s-~~el~~~i~~~~~~~~~~~ 177 (239)
...| .|+++ ++++. +.|++..+.+.+ |.+.+.
T Consensus 240 ~~~G~~y~itd~~p~~~~~~f~~~~~~~~-G~~~~~ 274 (280)
T PF01073_consen 240 RVAGQAYFITDGEPVPSFWDFMRPLWEAL-GYPPPK 274 (280)
T ss_pred cCCCcEEEEECCCccCcHHHHHHHHHHHC-CCCCCc
Confidence 2345 89888 78888 999999999997 655444
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.3e-23 Score=159.83 Aligned_cols=197 Identities=18% Similarity=0.152 Sum_probs=156.7
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+.+|..|+.||+++|++.|. ++||+|| ..||+...+. ++.|+++ ..|.+.||+||+++|..++.+
T Consensus 74 ~~vNa~~~~~lA~aa~~~ga-~lVhiST-DyVFDG~~~~---~Y~E~D~------~~P~nvYG~sKl~GE~~v~~~---- 138 (281)
T COG1091 74 FAVNATGAENLARAAAEVGA-RLVHIST-DYVFDGEKGG---PYKETDT------PNPLNVYGRSKLAGEEAVRAA---- 138 (281)
T ss_pred HHhHHHHHHHHHHHHHHhCC-eEEEeec-ceEecCCCCC---CCCCCCC------CCChhhhhHHHHHHHHHHHHh----
Confidence 46899999999999999996 7999999 6999766655 7888877 367899999999999999765
Q ss_pred CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCc-cCCCCCCceehHHHHHHHHHhhcCCCCCceEEEe-cCCCCH
Q 026418 82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKT-YANSVQAYVHVRDVALAHILVYETPSASGRYLCA-ESVLHR 159 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~ 159 (239)
+.+.+|+|.+++||... .++...+++....|+.+. ..++..+.+++.|+|+++..++......++|+++ ...+||
T Consensus 139 ~~~~~I~Rtswv~g~~g---~nFv~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~ll~~~~~~~~yH~~~~g~~Sw 215 (281)
T COG1091 139 GPRHLILRTSWVYGEYG---NNFVKTMLRLAKEGKELKVVDDQYGSPTYTEDLADAILELLEKEKEGGVYHLVNSGECSW 215 (281)
T ss_pred CCCEEEEEeeeeecCCC---CCHHHHHHHHhhcCCceEEECCeeeCCccHHHHHHHHHHHHhccccCcEEEEeCCCcccH
Confidence 57899999999999853 334444555666676665 4677778999999999999999887777799888 455799
Q ss_pred HHHHHHHHHhCCCCCC----CCCC--CCCCCCCCCCcccChHHHHh-hCCceeCHHHHHHHHHHH
Q 026418 160 GEVVEILAKFFPEYPI----PTKC--SDEKNPRKKPYKFSNQKLKD-LGLEFTPVKQCLYETVKS 217 (239)
Q Consensus 160 ~el~~~i~~~~~~~~~----~~~~--~~~~~~~~~~~~~~~~k~~~-lg~~p~~~~e~i~~~~~~ 217 (239)
.|+++.|.+.+ +... +... .+.....+....+|+.|+++ +|+++++|+++++++++.
T Consensus 216 ydfa~~I~~~~-~~~~~v~~~~~~~~~~~~a~RP~~S~L~~~k~~~~~g~~~~~w~~~l~~~~~~ 279 (281)
T COG1091 216 YEFAKAIFEEA-GVDGEVIEPIASAEYPTPAKRPANSSLDTKKLEKAFGLSLPEWREALKALLDE 279 (281)
T ss_pred HHHHHHHHHHh-CCCccccccccccccCccCCCCcccccchHHHHHHhCCCCccHHHHHHHHHhh
Confidence 99999999997 3211 1111 23344556678899999976 799999999999998764
|
|
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.4e-23 Score=167.38 Aligned_cols=216 Identities=23% Similarity=0.221 Sum_probs=156.6
Q ss_pred CchhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHH
Q 026418 1 MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA 80 (239)
Q Consensus 1 ~~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 80 (239)
++++||.||+|++++|++.+++++||+||. .|....... ...+|+.|.. ......|+.||..+|+++++.+..
T Consensus 98 ~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~-~Vvf~g~~~--~n~~E~~p~p----~~~~d~Y~~sKa~aE~~Vl~an~~ 170 (361)
T KOG1430|consen 98 AMRVNVNGTLNVIEACKELGVKRLIYTSSA-YVVFGGEPI--INGDESLPYP----LKHIDPYGESKALAEKLVLEANGS 170 (361)
T ss_pred heeecchhHHHHHHHHHHhCCCEEEEecCc-eEEeCCeec--ccCCCCCCCc----cccccccchHHHHHHHHHHHhcCC
Confidence 367999999999999999999999999996 666444321 1455655422 234568999999999999998766
Q ss_pred cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCc-c--CCCCCCceehHHHHHHHHHhhc-----CCCCCc-eEE
Q 026418 81 RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKT-Y--ANSVQAYVHVRDVALAHILVYE-----TPSASG-RYL 151 (239)
Q Consensus 81 ~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~i~v~D~a~~~~~~~~-----~~~~~~-~y~ 151 (239)
.++..+++||+.||||++.... ..++..+..|.... . +++..++++++.++.+++.+.. .+...| .|+
T Consensus 171 ~~l~T~aLR~~~IYGpgd~~~~---~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~aL~~~~~~~~Gq~yf 247 (361)
T KOG1430|consen 171 DDLYTCALRPPGIYGPGDKRLL---PKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAARALLDKSPSVNGQFYF 247 (361)
T ss_pred CCeeEEEEccccccCCCCcccc---HHHHHHHHccCceEEeeccccccceEEechhHHHHHHHHHHHHhcCCccCceEEE
Confidence 6799999999999999875432 34455555666543 2 3467789999999999987653 233455 777
Q ss_pred Ee-cCCCCHHHHHHHHHHhCCCCCCC-CCCCC--------------------CCC--------CCCCCcccChHHHHh-h
Q 026418 152 CA-ESVLHRGEVVEILAKFFPEYPIP-TKCSD--------------------EKN--------PRKKPYKFSNQKLKD-L 200 (239)
Q Consensus 152 ~~-~~~~s~~el~~~i~~~~~~~~~~-~~~~~--------------------~~~--------~~~~~~~~~~~k~~~-l 200 (239)
++ +.++...+++..+.+.+ +...+ .+..+ ... ......+++..|++. |
T Consensus 248 I~d~~p~~~~~~~~~l~~~l-g~~~~~~~~~p~~l~~~~~~l~e~~~~~l~p~~p~lt~~~v~~~~~~~~f~~~kA~~~l 326 (361)
T KOG1430|consen 248 ITDDTPVRFFDFLSPLVKAL-GYCLPSSIKLPLFLSYFLAYLLEIVYFLLRPYQPILTRFRVALLGVTRTFSIEKAKREL 326 (361)
T ss_pred EeCCCcchhhHHHHHHHHhc-CCCCCceeecchHHHHHHHHHHHHHHHhccCCCCCcChhheeeeccccccCHHHHHHhh
Confidence 77 78887777777888886 55544 22111 000 111366789999976 9
Q ss_pred CCce-eCHHHHHHHHHHHHHHcCCCCCC
Q 026418 201 GLEF-TPVKQCLYETVKSLQEKGHLPIP 227 (239)
Q Consensus 201 g~~p-~~~~e~i~~~~~~~~~~g~~~~~ 227 (239)
||+| .++++++.+++.|+........+
T Consensus 327 gY~P~~~~~e~~~~~~~~~~~~~~~~~~ 354 (361)
T KOG1430|consen 327 GYKPLVSLEEAIQRTIHWVASESDSAQA 354 (361)
T ss_pred CCCCcCCHHHHHHHHHHHHhhhhhcccc
Confidence 9999 99999999999988765554433
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.9e-23 Score=158.99 Aligned_cols=142 Identities=32% Similarity=0.412 Sum_probs=120.3
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
++.|+.++.+++++|++.++++|||+|| ..+|+..... +++|+++. .|.++|+.+|..+|++++.+.++.
T Consensus 89 ~~~n~~~~~~ll~~~~~~~~~~~i~~sS-~~~y~~~~~~---~~~e~~~~------~~~~~Y~~~K~~~e~~~~~~~~~~ 158 (236)
T PF01370_consen 89 IEANVQGTRNLLEAAREAGVKRFIFLSS-ASVYGDPDGE---PIDEDSPI------NPLSPYGASKRAAEELLRDYAKKY 158 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSEEEEEEE-GGGGTSSSSS---SBETTSGC------CHSSHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccc-cccccccccc---cccccccc------cccccccccccccccccccccccc
Confidence 5689999999999999999999999999 5999988544 78898874 457889999999999999999888
Q ss_pred CccEEEEecCcccCCC--CCCCCChhHHHHHHHHcCCCCc-c--CCCCCCceehHHHHHHHHHhhcCCC-CCceEEEe
Q 026418 82 GVDLVVVNPVLVLGPL--LQSTVNASIIHILKYLNGSAKT-Y--ANSVQAYVHVRDVALAHILVYETPS-ASGRYLCA 153 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~--~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~i~v~D~a~~~~~~~~~~~-~~~~y~~~ 153 (239)
+++++++||+++|||. ..........++.++.++++.. + ++..++|+|++|+|++++.+++++. .+++||++
T Consensus 159 ~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~yNig 236 (236)
T PF01370_consen 159 GLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPKAAGGIYNIG 236 (236)
T ss_dssp TSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSCTTTEEEEES
T ss_pred ccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence 9999999999999998 1223345556788888888654 3 4567899999999999999999888 55699874
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.9e-22 Score=161.05 Aligned_cols=194 Identities=18% Similarity=0.175 Sum_probs=135.4
Q ss_pred chhHhHHHHHHHHHHHhcCCC--EEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKVR--RVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~--~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
++.|+.++++++++|++.+++ +||++|| ..+|+..... +++|+++. .+.+.|+..+...|..+..+ +
T Consensus 83 ~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~-~~~yg~~~~~---~~~E~~~~------~~~~~~~~~~~~~e~~~~~~-~ 151 (292)
T TIGR01777 83 RDSRIDTTRALVEAIAAAEQKPKVFISASA-VGYYGTSEDR---VFTEEDSP------AGDDFLAELCRDWEEAAQAA-E 151 (292)
T ss_pred HhcccHHHHHHHHHHHhcCCCceEEEEeee-EEEeCCCCCC---CcCcccCC------CCCChHHHHHHHHHHHhhhc-h
Confidence 457999999999999999863 5666777 3788865443 67887642 33455677777777776654 3
Q ss_pred HcCccEEEEecCcccCCCCCCCCChhHHHHHHH--HcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCceEEEe-cCC
Q 026418 80 ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKY--LNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCA-ESV 156 (239)
Q Consensus 80 ~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~ 156 (239)
+.+++++++||+.+|||... ....++... ..+.....++..++++|++|+|+++..+++++...++||++ +++
T Consensus 152 ~~~~~~~ilR~~~v~G~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dva~~i~~~l~~~~~~g~~~~~~~~~ 227 (292)
T TIGR01777 152 DLGTRVVLLRTGIVLGPKGG----ALAKMLPPFRLGLGGPLGSGRQWFSWIHIEDLVQLILFALENASISGPVNATAPEP 227 (292)
T ss_pred hcCCceEEEeeeeEECCCcc----hhHHHHHHHhcCcccccCCCCcccccEeHHHHHHHHHHHhcCcccCCceEecCCCc
Confidence 46899999999999999632 111122111 12222223456789999999999999999876666799887 788
Q ss_pred CCHHHHHHHHHHhCCCCCCCCCCCCC---------CCCCCCCcccChHHHHhhCCce-e-CHHHHH
Q 026418 157 LHRGEVVEILAKFFPEYPIPTKCSDE---------KNPRKKPYKFSNQKLKDLGLEF-T-PVKQCL 211 (239)
Q Consensus 157 ~s~~el~~~i~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~k~~~lg~~p-~-~~~e~i 211 (239)
+|+.|+++.+.+.+ +.+.+...+.. .........++++|++++||+| + +++|++
T Consensus 228 ~s~~di~~~i~~~~-g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 292 (292)
T TIGR01777 228 VRNKEFAKALARAL-HRPAFFPVPAFVLRALLGEMADLLLKGQRVLPEKLLEAGFQFQYPDLDEAL 292 (292)
T ss_pred cCHHHHHHHHHHHh-CCCCcCcCCHHHHHHHhchhhHHHhCCcccccHHHHhcCCeeeCcChhhcC
Confidence 99999999999997 43322222110 1112346778899999999999 5 688764
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.7e-22 Score=163.49 Aligned_cols=180 Identities=15% Similarity=0.085 Sum_probs=134.8
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHH---
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA--- 78 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~--- 78 (239)
+++|+.|+.+++++|.+.++++||++||. ..+ .|.++|+.+|.++|.+++.++
T Consensus 98 ~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~-~~~-----------------------~p~~~Y~~sK~~~E~l~~~~~~~~ 153 (324)
T TIGR03589 98 IRTNINGAQNVIDAAIDNGVKRVVALSTD-KAA-----------------------NPINLYGATKLASDKLFVAANNIS 153 (324)
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEEeCC-CCC-----------------------CCCCHHHHHHHHHHHHHHHHHhhc
Confidence 57899999999999999999999999994 211 245779999999999997754
Q ss_pred HHcCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCC-CCcc--CCCCCCceehHHHHHHHHHhhcCCCCCceEEEecC
Q 026418 79 VARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGS-AKTY--ANSVQAYVHVRDVALAHILVYETPSASGRYLCAES 155 (239)
Q Consensus 79 ~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~~~ 155 (239)
+..|++++++||+++|||+. .....+...+..+. ...+ ++..++|+|++|++++++.++++...+.+|+.++.
T Consensus 154 ~~~gi~~~~lR~g~v~G~~~----~~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al~~~~~~~~~~~~~~ 229 (324)
T TIGR03589 154 GSKGTRFSVVRYGNVVGSRG----SVVPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKSLERMLGGEIFVPKIP 229 (324)
T ss_pred cccCcEEEEEeecceeCCCC----CcHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHHhhCCCCCEEccCCC
Confidence 35689999999999999853 23334444555564 2333 44567899999999999999986433347876678
Q ss_pred CCCHHHHHHHHHHhCCCCCCCCCCCCCCCCC-CCCcccChHHHHh-hCCce-eCHHHHHHHH
Q 026418 156 VLHRGEVVEILAKFFPEYPIPTKCSDEKNPR-KKPYKFSNQKLKD-LGLEF-TPVKQCLYET 214 (239)
Q Consensus 156 ~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~k~~~-lg~~p-~~~~e~i~~~ 214 (239)
.+++.|+++.+.+..+ .. ..+.+..+ .....+|.+|+++ |||+| +++++++.+.
T Consensus 230 ~~sv~el~~~i~~~~~-~~----~~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~l~~~~~~~ 286 (324)
T TIGR03589 230 SMKITDLAEAMAPECP-HK----IVGIRPGEKLHEVMITEDDARHTYELGDYYAILPSISFW 286 (324)
T ss_pred cEEHHHHHHHHHhhCC-ee----EeCCCCCchhHhhhcChhhhhhhcCCCCeEEEccccccc
Confidence 8999999999998752 21 11112222 2446689999966 99999 9999998644
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.85 E-value=2e-20 Score=158.54 Aligned_cols=171 Identities=18% Similarity=0.195 Sum_probs=121.3
Q ss_pred chhHhHHHHHHHHHHHhc-CCCEEEEccchhhhccCCCCC-CCccccCCC-C-----CChh-------------------
Q 026418 2 VEPAVIGTKNVIVAAAEA-KVRRVVFTSSIGAVYMDPNRS-PDDVVDESC-W-----SDLE------------------- 54 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~-~v~~~i~~Ss~~~vy~~~~~~-~~~~~~E~~-~-----~~~~------------------- 54 (239)
+++|+.||.+|+++|++. ++++|||+|| +++||...+. ++.++.+.. + .+++
T Consensus 133 ~~~Nv~gt~~ll~~a~~~~~~k~~V~vST-~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (491)
T PLN02996 133 LGINTLGALNVLNFAKKCVKVKMLLHVST-AYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDAS 211 (491)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCeEEEEee-eEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCC
Confidence 468999999999999986 5899999999 6999875421 111111110 0 0000
Q ss_pred ----------------hcccCCchHHHHHHHHHHHHHHHHHHcCccEEEEecCcccCCCCCCCCC------hhHHHHHHH
Q 026418 55 ----------------FCKNTKNWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVN------ASIIHILKY 112 (239)
Q Consensus 55 ----------------~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~------~~~~~~~~~ 112 (239)
....+.+.|+.||.++|.++..+. .+++++++||++|||+...+... ....++..+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~lv~~~~--~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~ 289 (491)
T PLN02996 212 EEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEMLLGNFK--ENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGY 289 (491)
T ss_pred HHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHHHHHHhc--CCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHh
Confidence 012245779999999999998875 38999999999999987655221 122344555
Q ss_pred HcCCCCc-cC--CCCCCceehHHHHHHHHHhhcCC--C--CCceEEEe-c--CCCCHHHHHHHHHHhCCCCCC
Q 026418 113 LNGSAKT-YA--NSVQAYVHVRDVALAHILVYETP--S--ASGRYLCA-E--SVLHRGEVVEILAKFFPEYPI 175 (239)
Q Consensus 113 ~~~~~~~-~~--~~~~~~i~v~D~a~~~~~~~~~~--~--~~~~y~~~-~--~~~s~~el~~~i~~~~~~~~~ 175 (239)
.+|.... ++ +..+|++||+|++++++.++.+. . ...+||++ + .++|+.|+++.+.+.+...+.
T Consensus 290 ~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~~~~~~~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~p~ 362 (491)
T PLN02996 290 GKGKLTCFLADPNSVLDVIPADMVVNAMIVAMAAHAGGQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKNPW 362 (491)
T ss_pred ccceEeEEecCCCeecceecccHHHHHHHHHHHHhhccCCCCcEEEecCCCCCcccHHHHHHHHHHHhhhCCC
Confidence 6666543 34 45899999999999999988753 1 22389887 6 789999999999998744443
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.2e-20 Score=160.76 Aligned_cols=174 Identities=20% Similarity=0.193 Sum_probs=126.0
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+++|+.++.+++++|++.++++|||+||. . |..+|+++. ++
T Consensus 76 ~~vNv~GT~nLLeAa~~~gvkr~V~iSS~-~----------------------------------K~aaE~ll~----~~ 116 (854)
T PRK05865 76 DHINIDGTANVLKAMAETGTGRIVFTSSG-H----------------------------------QPRVEQMLA----DC 116 (854)
T ss_pred HHHHHHHHHHHHHHHHHcCCCeEEEECCc-H----------------------------------HHHHHHHHH----Hc
Confidence 47899999999999999999999999994 2 678888774 35
Q ss_pred CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCC--CCCceehHHHHHHHHHhhcCCC-CCceEEEe-cCCC
Q 026418 82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANS--VQAYVHVRDVALAHILVYETPS-ASGRYLCA-ESVL 157 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~v~D~a~~~~~~~~~~~-~~~~y~~~-~~~~ 157 (239)
+++++++||+++|||+.. ..+..+........+++ .++|+|++|+|+++..++.... .+++||++ ++.+
T Consensus 117 gl~~vILRp~~VYGP~~~-------~~i~~ll~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~~ggvyNIgsg~~~ 189 (854)
T PRK05865 117 GLEWVAVRCALIFGRNVD-------NWVQRLFALPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVIDSGPVNLAAPGEL 189 (854)
T ss_pred CCCEEEEEeceEeCCChH-------HHHHHHhcCceeccCCCCceEeeeeHHHHHHHHHHHHhCCCcCCCeEEEECCCcc
Confidence 899999999999999621 12333332211122333 4589999999999999986543 34599887 7889
Q ss_pred CHHHHHHHHHHhCC--CCCCCCCCCCCC--CCCCCCcccChHHHHh-hCCce-eCHHHHHHHHHHHHHHc
Q 026418 158 HRGEVVEILAKFFP--EYPIPTKCSDEK--NPRKKPYKFSNQKLKD-LGLEF-TPVKQCLYETVKSLQEK 221 (239)
Q Consensus 158 s~~el~~~i~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~k~~~-lg~~p-~~~~e~i~~~~~~~~~~ 221 (239)
|+.|+++.+.+... +.+......... ........+|++|+++ |||+| ++++++|+++++|++.+
T Consensus 190 Si~EIae~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~D~sKar~~LGw~P~~sLeeGL~dti~~~r~r 259 (854)
T PRK05865 190 TFRRIAAALGRPMVPIGSPVLRRVTSFAELELLHSAPLMDVTLLRDRWGFQPAWNAEECLEDFTLAVRGR 259 (854)
T ss_pred cHHHHHHHHhhhhccCCchhhhhccchhhhhcccCCccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhh
Confidence 99999999987531 111111111100 1112244689999976 89999 99999999999999864
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.7e-19 Score=159.15 Aligned_cols=207 Identities=19% Similarity=0.137 Sum_probs=145.5
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
.++|+.++.+++++|++.++++|||+|| .++||...+ +.+|++.... ..+.+.|+.+|..+|+++++ ..
T Consensus 98 ~~~nv~gt~~ll~~a~~~~~~~~v~~SS-~~v~g~~~~----~~~e~~~~~~---~~~~~~Y~~sK~~~E~~~~~---~~ 166 (657)
T PRK07201 98 RAANVDGTRNVVELAERLQAATFHHVSS-IAVAGDYEG----VFREDDFDEG---QGLPTPYHRTKFEAEKLVRE---EC 166 (657)
T ss_pred HHHHhHHHHHHHHHHHhcCCCeEEEEec-cccccCccC----ccccccchhh---cCCCCchHHHHHHHHHHHHH---cC
Confidence 4689999999999999999999999999 489976543 3455543222 23457899999999999875 35
Q ss_pred CccEEEEecCcccCCCCCCCCC---h---hHHHHHHHHcCCC---Ccc--CCCCCCceehHHHHHHHHHhhcCCCCCc-e
Q 026418 82 GVDLVVVNPVLVLGPLLQSTVN---A---SIIHILKYLNGSA---KTY--ANSVQAYVHVRDVALAHILVYETPSASG-R 149 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~~~---~---~~~~~~~~~~~~~---~~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~ 149 (239)
+++++++||+++||+...+... . ....+..+ ...+ +.+ +.+..+++|++|+++++..++..+...| +
T Consensus 167 g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~vddva~ai~~~~~~~~~~g~~ 245 (657)
T PRK07201 167 GLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKL-AKLPSWLPMVGPDGGRTNIVPVDYVADALDHLMHKDGRDGQT 245 (657)
T ss_pred CCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHh-ccCCcccccccCCCCeeeeeeHHHHHHHHHHHhcCcCCCCCE
Confidence 8999999999999986543211 1 11122222 1111 111 2456789999999999999987655444 9
Q ss_pred EEEe-cCCCCHHHHHHHHHHhCCCCCC---CCCCCCC-------C-----------------------CCCCCCcccChH
Q 026418 150 YLCA-ESVLHRGEVVEILAKFFPEYPI---PTKCSDE-------K-----------------------NPRKKPYKFSNQ 195 (239)
Q Consensus 150 y~~~-~~~~s~~el~~~i~~~~~~~~~---~~~~~~~-------~-----------------------~~~~~~~~~~~~ 195 (239)
||++ ++++++.|+++.+.+.+ +.+. +....+. . ........+|++
T Consensus 246 ~ni~~~~~~s~~el~~~i~~~~-g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~f~~~ 324 (657)
T PRK07201 246 FHLTDPKPQRVGDIYNAFARAA-GAPPDARLFGFLPGFVAAPLLAALGPVRRLRNAVATQLGIPPEVLDFVNYPTTFDSR 324 (657)
T ss_pred EEeCCCCCCcHHHHHHHHHHHh-CCCccccccccCChHHHHHHhhhcchhhHHHHHHHHhcCCCHHHHHhccCCCeeccH
Confidence 9887 68999999999999997 3332 1111110 0 011234578999
Q ss_pred HHHh-h---CCceeCHHHHHHHHHHHHHHc
Q 026418 196 KLKD-L---GLEFTPVKQCLYETVKSLQEK 221 (239)
Q Consensus 196 k~~~-l---g~~p~~~~e~i~~~~~~~~~~ 221 (239)
++++ | |+...++.+.+.+.++|+.++
T Consensus 325 ~~~~~L~~~~~~~p~~~~~~~~~~~~~~~~ 354 (657)
T PRK07201 325 ETRAALKGSGIEVPRLASYAPRLWDYWERH 354 (657)
T ss_pred HHHHHhccCCcCCCChHHHHHHHHHHHHhc
Confidence 9865 6 666788999999999988776
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.9e-19 Score=142.89 Aligned_cols=197 Identities=12% Similarity=0.133 Sum_probs=137.4
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCC---CccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSP---DDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA 78 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~---~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~ 78 (239)
+++|+.+|.+|+++|++.+++ ++++|| +++|+.....+ ..+++|+++. ..+.+.|+.+|+++|.++..+.
T Consensus 84 ~~~Nv~gt~~ll~aa~~~gv~-~v~~sS-~~vy~~~~~~p~~~~~~~~Ee~~p-----~~~~s~Yg~sK~~~E~~~~~y~ 156 (298)
T PLN02778 84 IRANVVGTLTLADVCRERGLV-LTNYAT-GCIFEYDDAHPLGSGIGFKEEDTP-----NFTGSFYSKTKAMVEELLKNYE 156 (298)
T ss_pred HHHHHHHHHHHHHHHHHhCCC-EEEEec-ceEeCCCCCCCcccCCCCCcCCCC-----CCCCCchHHHHHHHHHHHHHhh
Confidence 468999999999999999986 566777 47886432111 1246766542 2345889999999999998875
Q ss_pred HHcCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCc-cCCCCCCceehHHHHHHHHHhhcCCCCCceEEEe-cCC
Q 026418 79 VARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKT-YANSVQAYVHVRDVALAHILVYETPSASGRYLCA-ESV 156 (239)
Q Consensus 79 ~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~ 156 (239)
+..++|++.++|++.. ....++..++.+..+. .+ .+|+|++|++++++.++.... .|+||++ ++.
T Consensus 157 -----~~~~lr~~~~~~~~~~----~~~~fi~~~~~~~~~~~~~---~s~~yv~D~v~al~~~l~~~~-~g~yNigs~~~ 223 (298)
T PLN02778 157 -----NVCTLRVRMPISSDLS----NPRNFITKITRYEKVVNIP---NSMTILDELLPISIEMAKRNL-TGIYNFTNPGV 223 (298)
T ss_pred -----ccEEeeecccCCcccc----cHHHHHHHHHcCCCeeEcC---CCCEEHHHHHHHHHHHHhCCC-CCeEEeCCCCc
Confidence 4678898888876421 1123567777776543 33 479999999999999987543 4699886 789
Q ss_pred CCHHHHHHHHHHhCCCCCC---CCCCCCC---CCCCCCCcccChHHHHh-hCCceeCHHHHHHHHHHHHH
Q 026418 157 LHRGEVVEILAKFFPEYPI---PTKCSDE---KNPRKKPYKFSNQKLKD-LGLEFTPVKQCLYETVKSLQ 219 (239)
Q Consensus 157 ~s~~el~~~i~~~~~~~~~---~~~~~~~---~~~~~~~~~~~~~k~~~-lg~~p~~~~e~i~~~~~~~~ 219 (239)
+|++|+++.+++.+ +... .....+. .........+|++|+++ ++=.+...+++++..++-++
T Consensus 224 iS~~el~~~i~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~Ld~~k~~~~~~~~~~~~~~~~~~~~~~~~ 292 (298)
T PLN02778 224 VSHNEILEMYRDYI-DPSFTWKNFTLEEQAKVIVAPRSNNELDTTKLKREFPELLPIKESLIKYVFEPNK 292 (298)
T ss_pred ccHHHHHHHHHHHh-CCCceeccccHHHHHHHHhCCCccccccHHHHHHhcccccchHHHHHHHHHHHHH
Confidence 99999999999997 3221 1111111 01112233799999987 56556778888888887764
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.82 E-value=9.5e-19 Score=132.62 Aligned_cols=206 Identities=16% Similarity=0.069 Sum_probs=159.8
Q ss_pred hhHhHHHHHHHHHHHhcC--CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHH
Q 026418 3 EPAVIGTKNVIVAAAEAK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA 80 (239)
Q Consensus 3 ~~Nv~~t~~ll~a~~~~~--v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 80 (239)
+++..||.+||+|.+..+ -.||...|| +..||..... |.+|.+|+ .|++||+.+|..+.-+..+|.+.
T Consensus 103 ~~~~iGtlrlLEaiR~~~~~~~rfYQASt-SE~fG~v~~~---pq~E~TPF------yPrSPYAvAKlYa~W~tvNYRes 172 (345)
T COG1089 103 DVDAIGTLRLLEAIRILGEKKTRFYQAST-SELYGLVQEI---PQKETTPF------YPRSPYAVAKLYAYWITVNYRES 172 (345)
T ss_pred eechhHHHHHHHHHHHhCCcccEEEeccc-HHhhcCcccC---ccccCCCC------CCCCHHHHHHHHHHheeeehHhh
Confidence 578899999999999986 368999999 7999987665 89999985 67999999999999999999999
Q ss_pred cCccEEEEecCcccCCCCCCCCC--hhHHHHHHHHcCCCCc--cC--CCCCCceehHHHHHHHHHhhcCCCCCceEEEe-
Q 026418 81 RGVDLVVVNPVLVLGPLLQSTVN--ASIIHILKYLNGSAKT--YA--NSVQAYVHVRDVALAHILVYETPSASGRYLCA- 153 (239)
Q Consensus 81 ~~~~~~i~Rp~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~--~~--~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~- 153 (239)
+|+-.|.=++++-=+|.+...+. .+...+.++..|..-. +| +.++||-|+.|-++++++.+++.. +..|+++
T Consensus 173 Ygl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~mwlmLQq~~-PddyViAT 251 (345)
T COG1089 173 YGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAMWLMLQQEE-PDDYVIAT 251 (345)
T ss_pred cCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHHHHHHHHccCC-CCceEEec
Confidence 99999988888888876543322 2223344555565432 45 578999999999999999998776 3577555
Q ss_pred cCCCCHHHHHHHHHHhCCCCCCCCC-------------------CCC--CCCCCCCCcccChHHHHh-hCCce-eCHHHH
Q 026418 154 ESVLHRGEVVEILAKFFPEYPIPTK-------------------CSD--EKNPRKKPYKFSNQKLKD-LGLEF-TPVKQC 210 (239)
Q Consensus 154 ~~~~s~~el~~~i~~~~~~~~~~~~-------------------~~~--~~~~~~~~~~~~~~k~~~-lg~~p-~~~~e~ 210 (239)
|++.|++|++++..+.. +..+... +.+ .++....-+..|.+|+++ |||+| ++++|.
T Consensus 252 g~t~sVrefv~~Af~~~-g~~l~w~g~g~~e~g~da~~G~~~V~idp~~fRPaEV~~Llgdp~KA~~~LGW~~~~~~~el 330 (345)
T COG1089 252 GETHSVREFVELAFEMV-GIDLEWEGTGVDEKGVDAKTGKIIVEIDPRYFRPAEVDLLLGDPTKAKEKLGWRPEVSLEEL 330 (345)
T ss_pred CceeeHHHHHHHHHHHc-CceEEEeeccccccccccccCceeEEECccccCchhhhhhcCCHHHHHHHcCCccccCHHHH
Confidence 99999999999999986 4333211 111 122233456779999975 99999 999999
Q ss_pred HHHHHHHHHH
Q 026418 211 LYETVKSLQE 220 (239)
Q Consensus 211 i~~~~~~~~~ 220 (239)
+++|+++-++
T Consensus 331 v~~Mv~~dl~ 340 (345)
T COG1089 331 VREMVEADLE 340 (345)
T ss_pred HHHHHHHHHH
Confidence 9999998664
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.81 E-value=9e-18 Score=138.11 Aligned_cols=215 Identities=20% Similarity=0.216 Sum_probs=140.4
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
.++|+.++.+++++|.+.++++|||+||. ++|+..... +..|+++.... ...+.+.|+.+|+.+|.+++.+.+.
T Consensus 109 ~~~nv~g~~~ll~~a~~~~~~~~v~iSS~-~v~~~~~~~---~~~~~~~~~~~-~~~~~~~Y~~sK~~~E~~~~~~~~~- 182 (367)
T TIGR01746 109 RAANVLGTREVLRLAASGRAKPLHYVSTI-SVLAAIDLS---TVTEDDAIVTP-PPGLAGGYAQSKWVAELLVREASDR- 182 (367)
T ss_pred hhhhhHHHHHHHHHHhhCCCceEEEEccc-cccCCcCCC---Ccccccccccc-ccccCCChHHHHHHHHHHHHHHHhc-
Confidence 36899999999999999998899999995 888764332 23444332211 1134578999999999999887654
Q ss_pred CccEEEEecCcccCCCCCCCCCh---hHHHHHHHHc-CCCCccCCCCCCceehHHHHHHHHHhhcCCCC---CceEEEe-
Q 026418 82 GVDLVVVNPVLVLGPLLQSTVNA---SIIHILKYLN-GSAKTYANSVQAYVHVRDVALAHILVYETPSA---SGRYLCA- 153 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~---~~~y~~~- 153 (239)
|++++++||+.++|+...+.... ....+..... +..+.......+++|++|++++++.++..... +++||++
T Consensus 183 g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~ 262 (367)
T TIGR01746 183 GLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYPDSPELTEDLTPVDYVARAIVALSSQPAASAGGPVFHVVN 262 (367)
T ss_pred CCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCCCCCCccccCcccHHHHHHHHHHHHhCCCcccCCceEEecC
Confidence 99999999999999754332221 1122222222 22121222357799999999999998876553 4489887
Q ss_pred cCCCCHHHHHHHHHHhCCCCCCCCCC---------------CCC----------C------CCCCCCcccChHHHHh---
Q 026418 154 ESVLHRGEVVEILAKFFPEYPIPTKC---------------SDE----------K------NPRKKPYKFSNQKLKD--- 199 (239)
Q Consensus 154 ~~~~s~~el~~~i~~~~~~~~~~~~~---------------~~~----------~------~~~~~~~~~~~~k~~~--- 199 (239)
++++++.|+++.+.+ . +.+++... ... . ........++++++++
T Consensus 263 ~~~~s~~e~~~~i~~-~-g~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (367)
T TIGR01746 263 PEPVSLDEFLEWLER-A-GYNLKLVSFDEWLQRLEDSDTAKRDPPRYPLLPLLHFLGAGFEEPEFDTRNLDSRSTAEALE 340 (367)
T ss_pred CCCCCHHHHHHHHHH-c-CCCCCcCCHHHHHHHHHHhhhcCCCcccccchhhhhccCCCcccccccccccchHHHHHHHh
Confidence 689999999999998 4 33322110 000 0 0000122455665532
Q ss_pred -hCCce-eCHHHHHHHHHHHHHHcCCC
Q 026418 200 -LGLEF-TPVKQCLYETVKSLQEKGHL 224 (239)
Q Consensus 200 -lg~~p-~~~~e~i~~~~~~~~~~g~~ 224 (239)
++..+ .--.+.|++.++++...|++
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (367)
T TIGR01746 341 GDGIREPSITAPLLHLYLQYLKEIGFL 367 (367)
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHcCCC
Confidence 46554 34567788899999888764
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=4e-18 Score=137.72 Aligned_cols=183 Identities=12% Similarity=0.099 Sum_probs=126.9
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
.++|+.++.+++++|+++++++|||+||. ..+. .+..+|..+|..+|++++ +.
T Consensus 83 ~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~-~~~~----------------------~~~~~~~~~K~~~e~~l~----~~ 135 (317)
T CHL00194 83 KQIDWDGKLALIEAAKAAKIKRFIFFSIL-NAEQ----------------------YPYIPLMKLKSDIEQKLK----KS 135 (317)
T ss_pred hhhhHHHHHHHHHHHHHcCCCEEEEeccc-cccc----------------------cCCChHHHHHHHHHHHHH----Hc
Confidence 46799999999999999999999999995 2210 113458899999998874 45
Q ss_pred CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCcc--CCCCCCceehHHHHHHHHHhhcCCCCCc-eEEEe-cCCC
Q 026418 82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY--ANSVQAYVHVRDVALAHILVYETPSASG-RYLCA-ESVL 157 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~y~~~-~~~~ 157 (239)
+++++++||+.+|+.... ......+.+.+... ++..++|+|++|+|++++.++.++...+ +||++ ++.+
T Consensus 136 ~l~~tilRp~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~ni~g~~~~ 208 (317)
T CHL00194 136 GIPYTIFRLAGFFQGLIS-------QYAIPILEKQPIWITNESTPISYIDTQDAAKFCLKSLSLPETKNKTFPLVGPKSW 208 (317)
T ss_pred CCCeEEEeecHHhhhhhh-------hhhhhhccCCceEecCCCCccCccCHHHHHHHHHHHhcCccccCcEEEecCCCcc
Confidence 899999999988864211 11222333333322 3456789999999999999998765444 99887 6789
Q ss_pred CHHHHHHHHHHhCCCCCCCCCCCC------------------C-C--------CCCCCCcccChHHHHh-hCCce---eC
Q 026418 158 HRGEVVEILAKFFPEYPIPTKCSD------------------E-K--------NPRKKPYKFSNQKLKD-LGLEF---TP 206 (239)
Q Consensus 158 s~~el~~~i~~~~~~~~~~~~~~~------------------~-~--------~~~~~~~~~~~~k~~~-lg~~p---~~ 206 (239)
|+.|+++.+.+.+ +.+......+ . . .........+.+++++ ||+.| .+
T Consensus 209 s~~el~~~~~~~~-g~~~~~~~vp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~ 287 (317)
T CHL00194 209 NSSEIISLCEQLS-GQKAKISRVPLFLLKLLRQITGFFEWTWNISDRLAFVEILNTSNNFSSSMAELYKIFKIDPNELIS 287 (317)
T ss_pred CHHHHHHHHHHHh-CCCCeEEeCCHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCCcCCCHHHHHHHhCCChhhhhh
Confidence 9999999999987 3322211111 0 0 0111234456667765 89997 68
Q ss_pred HHHHHHHHHHHHH
Q 026418 207 VKQCLYETVKSLQ 219 (239)
Q Consensus 207 ~~e~i~~~~~~~~ 219 (239)
+++++++.+...+
T Consensus 288 ~~~~~~~~~~~~~ 300 (317)
T CHL00194 288 LEDYFQEYFERIL 300 (317)
T ss_pred HHHHHHHHHHHHH
Confidence 8888888876543
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.3e-18 Score=129.00 Aligned_cols=198 Identities=16% Similarity=0.166 Sum_probs=136.8
Q ss_pred chhHhHHHHHHHHHHHhc--CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~--~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
++.-++.|+.|.++..+. +++.+|..|.+ .+||+.... .++|+.+. .+.+..--+..++-....++
T Consensus 82 ~~SRi~~T~~L~e~I~~~~~~P~~~isaSAv-GyYG~~~~~---~~tE~~~~--------g~~Fla~lc~~WE~~a~~a~ 149 (297)
T COG1090 82 RQSRINTTEKLVELIAASETKPKVLISASAV-GYYGHSGDR---VVTEESPP--------GDDFLAQLCQDWEEEALQAQ 149 (297)
T ss_pred HHHHhHHHHHHHHHHHhccCCCcEEEecceE-EEecCCCce---eeecCCCC--------CCChHHHHHHHHHHHHhhhh
Confidence 567889999999999854 47788888886 999988766 88998652 33333333333333333345
Q ss_pred HcCccEEEEecCcccCCCCCCCCChhHHHHHH--HHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCceEEEe-cCC
Q 026418 80 ARGVDLVVVNPVLVLGPLLQSTVNASIIHILK--YLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCA-ESV 156 (239)
Q Consensus 80 ~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~ 156 (239)
..|.+++.+|.|+|.|+. ......++.. ..-|.+..-|.+.++|||++|+++++.+++++....|.||++ +.|
T Consensus 150 ~~gtRvvllRtGvVLs~~----GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~~~lsGp~N~taP~P 225 (297)
T COG1090 150 QLGTRVVLLRTGVVLSPD----GGALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLENEQLSGPFNLTAPNP 225 (297)
T ss_pred hcCceEEEEEEEEEecCC----CcchhhhcchhhhccCCccCCCCceeeeeeHHHHHHHHHHHHhCcCCCCcccccCCCc
Confidence 669999999999999974 2222233322 223444444555678999999999999999999999999887 899
Q ss_pred CCHHHHHHHHHHhCCCCCCCCCCCC----CCCCCCCCcccChHH-----HHhhCCce--eCHHHHHHHHHH
Q 026418 157 LHRGEVVEILAKFFPEYPIPTKCSD----EKNPRKKPYKFSNQK-----LKDLGLEF--TPVKQCLYETVK 216 (239)
Q Consensus 157 ~s~~el~~~i~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~k-----~~~lg~~p--~~~~e~i~~~~~ 216 (239)
++..++.+++++.+ ..+.....++ ..........++..| +.+.||++ .+++++|++.+.
T Consensus 226 V~~~~F~~al~r~l-~RP~~~~vP~~~~rl~LGe~a~~lL~gQrvlP~kl~~aGF~F~y~dl~~AL~~il~ 295 (297)
T COG1090 226 VRNKEFAHALGRAL-HRPAILPVPSFALRLLLGEMADLLLGGQRVLPKKLEAAGFQFQYPDLEEALADILK 295 (297)
T ss_pred CcHHHHHHHHHHHh-CCCccccCcHHHHHHHhhhhHHHHhccchhhHHHHHHCCCeeecCCHHHHHHHHHh
Confidence 99999999999997 3322222221 111222233445554 44468887 899999998764
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.3e-18 Score=133.82 Aligned_cols=142 Identities=20% Similarity=0.175 Sum_probs=113.5
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+++|+.||+|++++|.++++++||++||. ... .|.+.||.||+.+|+++..++...
T Consensus 101 v~tNv~GT~nv~~aa~~~~v~~~v~ISTD-KAv-----------------------~PtnvmGatKrlaE~l~~~~~~~~ 156 (293)
T PF02719_consen 101 VKTNVLGTQNVAEAAIEHGVERFVFISTD-KAV-----------------------NPTNVMGATKRLAEKLVQAANQYS 156 (293)
T ss_dssp HHHHCHHHHHHHHHHHHTT-SEEEEEEEC-GCS-----------------------S--SHHHHHHHHHHHHHHHHCCTS
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEcccc-ccC-----------------------CCCcHHHHHHHHHHHHHHHHhhhC
Confidence 57899999999999999999999999994 322 468999999999999999987665
Q ss_pred ---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCcc--CCCCCCceehHHHHHHHHHhhcCCCCCceEEEe-cC
Q 026418 82 ---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY--ANSVQAYVHVRDVALAHILVYETPSASGRYLCA-ES 155 (239)
Q Consensus 82 ---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~ 155 (239)
+.+++.+|+|+|.|. .++....+..++.+|.++.. ++..|-|+.++++++.++.++.....+.+|+.- |+
T Consensus 157 ~~~~t~f~~VRFGNVlgS----~GSVip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~Lvl~a~~~~~~geifvl~mg~ 232 (293)
T PF02719_consen 157 GNSDTKFSSVRFGNVLGS----RGSVIPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQLVLQAAALAKGGEIFVLDMGE 232 (293)
T ss_dssp SSS--EEEEEEE-EETTG----TTSCHHHHHHHHHTTSSEEECETT-EEEEE-HHHHHHHHHHHHHH--TTEEEEE---T
T ss_pred CCCCcEEEEEEecceecC----CCcHHHHHHHHHHcCCcceeCCCCcEEEEecHHHHHHHHHHHHhhCCCCcEEEecCCC
Confidence 679999999999997 45666778888999988765 667788999999999999999876665599888 89
Q ss_pred CCCHHHHHHHHHHhCC
Q 026418 156 VLHRGEVVEILAKFFP 171 (239)
Q Consensus 156 ~~s~~el~~~i~~~~~ 171 (239)
++++.|+++.+.+.++
T Consensus 233 ~v~I~dlA~~~i~~~g 248 (293)
T PF02719_consen 233 PVKILDLAEAMIELSG 248 (293)
T ss_dssp CEECCCHHHHHHHHTT
T ss_pred CcCHHHHHHHHHhhcc
Confidence 9999999999999873
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.74 E-value=5.8e-17 Score=134.21 Aligned_cols=141 Identities=18% Similarity=0.182 Sum_probs=121.8
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+..||.||+|+++||.+.++++||.+||.-+| .|.+.||.||+.+|.++..++++.
T Consensus 349 i~tNV~GT~nv~~aa~~~~V~~~V~iSTDKAV------------------------~PtNvmGaTKr~aE~~~~a~~~~~ 404 (588)
T COG1086 349 IKTNVLGTENVAEAAIKNGVKKFVLISTDKAV------------------------NPTNVMGATKRLAEKLFQAANRNV 404 (588)
T ss_pred HHHhhHhHHHHHHHHHHhCCCEEEEEecCccc------------------------CCchHhhHHHHHHHHHHHHHhhcc
Confidence 46899999999999999999999999995333 368999999999999999997643
Q ss_pred ---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCcc--CCCCCCceehHHHHHHHHHhhcCCCCCceEEEe-cC
Q 026418 82 ---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY--ANSVQAYVHVRDVALAHILVYETPSASGRYLCA-ES 155 (239)
Q Consensus 82 ---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~ 155 (239)
+..++++|+|||.|. .++..+.+...+.+|.+... ++..|-|+.+.+.++.++.+......+.+|..- |+
T Consensus 405 ~~~~T~f~~VRFGNVlGS----rGSViPlFk~QI~~GgplTvTdp~mtRyfMTI~EAv~LVlqA~a~~~gGeifvldMGe 480 (588)
T COG1086 405 SGTGTRFCVVRFGNVLGS----RGSVIPLFKKQIAEGGPLTVTDPDMTRFFMTIPEAVQLVLQAGAIAKGGEIFVLDMGE 480 (588)
T ss_pred CCCCcEEEEEEecceecC----CCCCHHHHHHHHHcCCCccccCCCceeEEEEHHHHHHHHHHHHhhcCCCcEEEEcCCC
Confidence 389999999999997 34555666788888988765 667788999999999999999877666699998 89
Q ss_pred CCCHHHHHHHHHHhC
Q 026418 156 VLHRGEVVEILAKFF 170 (239)
Q Consensus 156 ~~s~~el~~~i~~~~ 170 (239)
++++.|+++.+-+..
T Consensus 481 pvkI~dLAk~mi~l~ 495 (588)
T COG1086 481 PVKIIDLAKAMIELA 495 (588)
T ss_pred CeEHHHHHHHHHHHh
Confidence 999999999998886
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.7e-16 Score=140.12 Aligned_cols=193 Identities=15% Similarity=0.178 Sum_probs=132.3
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCC---CCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNR---SPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA 78 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~---~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~ 78 (239)
+++|+.++.+|+++|++.+++ +|++|| +++|+.... ....+++|+++. ..+.+.|+.+|+++|++++.+.
T Consensus 455 ~~~N~~gt~~l~~a~~~~g~~-~v~~Ss-~~v~~~~~~~~~~~~~p~~E~~~~-----~~~~~~Yg~sK~~~E~~~~~~~ 527 (668)
T PLN02260 455 IRANVVGTLTLADVCRENGLL-MMNFAT-GCIFEYDAKHPEGSGIGFKEEDKP-----NFTGSFYSKTKAMVEELLREYD 527 (668)
T ss_pred HHHHhHHHHHHHHHHHHcCCe-EEEEcc-cceecCCcccccccCCCCCcCCCC-----CCCCChhhHHHHHHHHHHHhhh
Confidence 468999999999999999984 778888 588864211 111257776542 1235899999999999998874
Q ss_pred HHcCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCC-CccCCCCCCceehHHHHHHHHHhhcCCCCCceEEEe-cCC
Q 026418 79 VARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSA-KTYANSVQAYVHVRDVALAHILVYETPSASGRYLCA-ESV 156 (239)
Q Consensus 79 ~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~ 156 (239)
+..++|+..+||...... ..++..+++... +..+ .+..+++|++.+++.++.. ..+|+||++ ++.
T Consensus 528 -----~~~~~r~~~~~~~~~~~~----~nfv~~~~~~~~~~~vp---~~~~~~~~~~~~~~~l~~~-~~~giyni~~~~~ 594 (668)
T PLN02260 528 -----NVCTLRVRMPISSDLSNP----RNFITKISRYNKVVNIP---NSMTVLDELLPISIEMAKR-NLRGIWNFTNPGV 594 (668)
T ss_pred -----hheEEEEEEecccCCCCc----cHHHHHHhccceeeccC---CCceehhhHHHHHHHHHHh-CCCceEEecCCCc
Confidence 467788888886432111 133445554443 2234 3467788899888888864 335799988 678
Q ss_pred CCHHHHHHHHHHhCC-CCC-CCCCC--CC--CCCCCCCCcccChHHHHh-hCCceeCHHHHHHHHHH
Q 026418 157 LHRGEVVEILAKFFP-EYP-IPTKC--SD--EKNPRKKPYKFSNQKLKD-LGLEFTPVKQCLYETVK 216 (239)
Q Consensus 157 ~s~~el~~~i~~~~~-~~~-~~~~~--~~--~~~~~~~~~~~~~~k~~~-lg~~p~~~~e~i~~~~~ 216 (239)
+|++|+++.+.+.+. +.. .++.. .+ .....+.. .+|++|+++ +|+ +.+|+++|++.+.
T Consensus 595 ~s~~e~a~~i~~~~~~~~~~~~~~~~~~~~~~~a~rp~~-~l~~~k~~~~~~~-~~~~~~~l~~~~~ 659 (668)
T PLN02260 595 VSHNEILEMYKDYIDPGFKWSNFTLEEQAKVIVAPRSNN-EMDASKLKKEFPE-LLSIKESLIKYVF 659 (668)
T ss_pred CcHHHHHHHHHHhcCCcccccccCHHHhhhHhhCCCccc-cccHHHHHHhCcc-ccchHHHHHHHHh
Confidence 999999999999752 322 11111 11 12233445 899999987 788 9999999998864
|
|
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.1e-15 Score=113.23 Aligned_cols=217 Identities=14% Similarity=0.151 Sum_probs=156.8
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
.++|+.|..|+++.|++++.+ +..-||+ +.||..... +.+..... .+|++.||.||..+|.+-+.+..++
T Consensus 133 ~~VNI~GvHNil~vAa~~kL~-iFVPSTI-GAFGPtSPR-----NPTPdltI---QRPRTIYGVSKVHAEL~GEy~~hrF 202 (366)
T KOG2774|consen 133 LQVNIRGVHNILQVAAKHKLK-VFVPSTI-GAFGPTSPR-----NPTPDLTI---QRPRTIYGVSKVHAELLGEYFNHRF 202 (366)
T ss_pred eeecchhhhHHHHHHHHcCee-Eeecccc-cccCCCCCC-----CCCCCeee---ecCceeechhHHHHHHHHHHHHhhc
Confidence 468999999999999999974 5556775 666655432 22211112 4789999999999999999999999
Q ss_pred CccEEEEecCcccCCCCCCCCC---hhHHHHHHHHcCCCCcc--CCCCCCceehHHHHHHHHHhhcCCCC--Cc-eEEEe
Q 026418 82 GVDLVVVNPVLVLGPLLQSTVN---ASIIHILKYLNGSAKTY--ANSVQAYVHVRDVALAHILVYETPSA--SG-RYLCA 153 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~~~---~~~~~~~~~~~~~~~~~--~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~y~~~ 153 (239)
|+++-.+|++.++.....+++. ....+..+..+|+...+ ++.+..+.|..|+.++++.++..+.. .. +||++
T Consensus 203 g~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc~~~~~~~~~a~~~~lkrr~ynvt 282 (366)
T KOG2774|consen 203 GVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDCMASVIQLLAADSQSLKRRTYNVT 282 (366)
T ss_pred CccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHHHHHHHHHHHhCCHHHhhhheeeec
Confidence 9999999999998753322222 22233355556776554 77888999999999999998876543 22 99999
Q ss_pred cCCCCHHHHHHHHHHhCCCCCCCCCCCCCCC-CCCCCcccChHHHHh-hCCce-eCHHHHHHHHHHHHHHcCCCCCCc
Q 026418 154 ESVLHRGEVVEILAKFFPEYPIPTKCSDEKN-PRKKPYKFSNQKLKD-LGLEF-TPVKQCLYETVKSLQEKGHLPIPT 228 (239)
Q Consensus 154 ~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~k~~~-lg~~p-~~~~e~i~~~~~~~~~~g~~~~~~ 228 (239)
+-..|-.|++..+.+.+|+..+......... .+.-+..+|.+.++. ..|+- ..+...+.-++.....+-.+-+|.
T Consensus 283 ~~sftpee~~~~~~~~~p~~~i~y~~~srq~iad~wp~~~dds~ar~~wh~~h~~~l~~~i~~~i~~~~~n~~~~~p~ 360 (366)
T KOG2774|consen 283 GFSFTPEEIADAIRRVMPGFEIDYDICTRQSIADSWPMSLDDSEARTEWHEKHSLHLLSIISTVVAVHKSNLKLLKPQ 360 (366)
T ss_pred eeccCHHHHHHHHHhhCCCceeecccchhhhhhhhcccccCchhHhhHHHHhhhhhHHHHHHHHHHHHHhhhhhcChh
Confidence 9999999999999999998876655443222 122356778888864 77776 777777777777766554444443
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.68 E-value=5.6e-15 Score=140.35 Aligned_cols=221 Identities=22% Similarity=0.212 Sum_probs=143.7
Q ss_pred hhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCC---------CCccccCCCCCChhhcccCCchHHHHHHHHHHH
Q 026418 3 EPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRS---------PDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKA 73 (239)
Q Consensus 3 ~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~---------~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~ 73 (239)
..|+.||.+++++|.+.++++|+|+||. ++|+..... ....+.|+.+.... ...+.+.|+.+|+.+|.+
T Consensus 1083 ~~nv~gt~~ll~~a~~~~~~~~v~vSS~-~v~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~~~~Y~~sK~~aE~l 1160 (1389)
T TIGR03443 1083 DANVIGTINVLNLCAEGKAKQFSFVSST-SALDTEYYVNLSDELVQAGGAGIPESDDLMGS-SKGLGTGYGQSKWVAEYI 1160 (1389)
T ss_pred HhHHHHHHHHHHHHHhCCCceEEEEeCe-eecCcccccchhhhhhhccCCCCCcccccccc-cccCCCChHHHHHHHHHH
Confidence 4799999999999999889999999995 888642100 00123344322211 123456799999999999
Q ss_pred HHHHHHHcCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCC----CCccCCCCCCceehHHHHHHHHHhhcCCCC--C
Q 026418 74 AWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGS----AKTYANSVQAYVHVRDVALAHILVYETPSA--S 147 (239)
Q Consensus 74 ~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~ 147 (239)
+..+.+ .|++++++||+.|||+...+.... ..++..++++. ......+.++|++|+|++++++.++.++.. .
T Consensus 1161 ~~~~~~-~g~~~~i~Rpg~v~G~~~~g~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~ 1238 (1389)
T TIGR03443 1161 IREAGK-RGLRGCIVRPGYVTGDSKTGATNT-DDFLLRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAALNPPKESE 1238 (1389)
T ss_pred HHHHHh-CCCCEEEECCCccccCCCcCCCCc-hhHHHHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHhCCcccCC
Confidence 998765 499999999999999875543322 22333333322 111234568999999999999998876532 2
Q ss_pred c-eEEEe-cCCCCHHHHHHHHHHhCCCCCCCCCCC---------------CC-------------CCCCCCCcccChHHH
Q 026418 148 G-RYLCA-ESVLHRGEVVEILAKFFPEYPIPTKCS---------------DE-------------KNPRKKPYKFSNQKL 197 (239)
Q Consensus 148 ~-~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~---------------~~-------------~~~~~~~~~~~~~k~ 197 (239)
+ +||++ +..+++.++++.+.+. +.+++.... .. .........+|+++.
T Consensus 1239 ~~i~~~~~~~~~~~~~~~~~l~~~--g~~~~~~~~~~w~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 1316 (1389)
T TIGR03443 1239 LAVAHVTGHPRIRFNDFLGTLKTY--GYDVEIVDYVHWRKSLERFVIERSEDNALFPLLHFVLDDLPQSTKAPELDDTNA 1316 (1389)
T ss_pred CCEEEeCCCCCCcHHHHHHHHHHh--CCCCCccCHHHHHHHHHHhccccCccchhhhHHHHhhccCcccccCCCCCCHHH
Confidence 2 78887 6688999999999765 222221100 00 000112345577776
Q ss_pred Hh-h-------CCcee---C-HHHHHHHHHHHHHHcCCCCCCcc
Q 026418 198 KD-L-------GLEFT---P-VKQCLYETVKSLQEKGHLPIPTQ 229 (239)
Q Consensus 198 ~~-l-------g~~p~---~-~~e~i~~~~~~~~~~g~~~~~~~ 229 (239)
++ + |.... . -.+.|+..+++|.+.|+|+.|..
T Consensus 1317 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 1360 (1389)
T TIGR03443 1317 ATSLKADAAWTGVDVSSGAGVTEEQIGIYIAYLVKVGFLPAPTK 1360 (1389)
T ss_pred HHHHHhhcccccCCCcCCCCCCHHHHHHHHHHHHHCCCCCCCCC
Confidence 54 4 22222 2 24677889999999999987763
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.1e-15 Score=126.46 Aligned_cols=138 Identities=16% Similarity=0.060 Sum_probs=107.8
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+++|+.++.+++++|++.++++||++||. .+|+ |...|..+|...|+.+.. ...
T Consensus 155 ~~vn~~~~~~ll~aa~~~gv~r~V~iSS~-~v~~-----------------------p~~~~~~sK~~~E~~l~~--~~~ 208 (390)
T PLN02657 155 WKIDYQATKNSLDAGREVGAKHFVLLSAI-CVQK-----------------------PLLEFQRAKLKFEAELQA--LDS 208 (390)
T ss_pred hhhHHHHHHHHHHHHHHcCCCEEEEEeec-cccC-----------------------cchHHHHHHHHHHHHHHh--ccC
Confidence 46899999999999999999999999995 5541 234588999999998865 346
Q ss_pred CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCc-cCCCC--C-CceehHHHHHHHHHhhcCCCCCc-eEEEec--
Q 026418 82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKT-YANSV--Q-AYVHVRDVALAHILVYETPSASG-RYLCAE-- 154 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~-~~i~v~D~a~~~~~~~~~~~~~~-~y~~~~-- 154 (239)
+++++++||+.+||+. ...+..+.+|.+.. ++++. + .+||++|+|++++.++..+...+ +|++++
T Consensus 209 gl~~tIlRp~~~~~~~--------~~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~~~~~~~~Iggp~ 280 (390)
T PLN02657 209 DFTYSIVRPTAFFKSL--------GGQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDESKINKVLPIGGPG 280 (390)
T ss_pred CCCEEEEccHHHhccc--------HHHHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHhCccccCCEEEcCCCC
Confidence 9999999999999742 12345555666654 46654 2 47999999999999987654444 898874
Q ss_pred CCCCHHHHHHHHHHhCCCCC
Q 026418 155 SVLHRGEVVEILAKFFPEYP 174 (239)
Q Consensus 155 ~~~s~~el~~~i~~~~~~~~ 174 (239)
+.+|++|+++.+.+.+ +.+
T Consensus 281 ~~~S~~Eia~~l~~~l-G~~ 299 (390)
T PLN02657 281 KALTPLEQGEMLFRIL-GKE 299 (390)
T ss_pred cccCHHHHHHHHHHHh-CCC
Confidence 5899999999999997 443
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.64 E-value=4.4e-16 Score=121.54 Aligned_cols=132 Identities=23% Similarity=0.154 Sum_probs=78.8
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCC-Ccc--ccCCCCCChhhcccCCchHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSP-DDV--VDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA 78 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~-~~~--~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~ 78 (239)
.++||.||++|++.|.+.+.++|+|+|| +.+.+...+.. +.. ..+.. ........+.|..||+.+|++++++.
T Consensus 108 ~~~NV~gt~~ll~la~~~~~~~~~~iST-a~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~gY~~SK~~aE~~l~~a~ 183 (249)
T PF07993_consen 108 RAVNVDGTRNLLRLAAQGKRKRFHYIST-AYVAGSRPGTIEEKVYPEEEDD---LDPPQGFPNGYEQSKWVAERLLREAA 183 (249)
T ss_dssp HHHHHHHHHHHHHHHTSSS---EEEEEE-GGGTTS-TTT--SSS-HHH--E---EE--TTSEE-HHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHhccCcceEEecc-ccccCCCCCccccccccccccc---chhhccCCccHHHHHHHHHHHHHHHH
Confidence 5789999999999999877679999999 67776655321 000 11111 11113456789999999999999998
Q ss_pred HHcCccEEEEecCcccCCCCCCCC---ChhHH-HHHHHHcCCCCcc---CCCCCCceehHHHHHHH
Q 026418 79 VARGVDLVVVNPVLVLGPLLQSTV---NASII-HILKYLNGSAKTY---ANSVQAYVHVRDVALAH 137 (239)
Q Consensus 79 ~~~~~~~~i~Rp~~v~G~~~~~~~---~~~~~-~~~~~~~~~~~~~---~~~~~~~i~v~D~a~~~ 137 (239)
++.|++++|+||+.|+|...++.. ..... +...+..|..+.. ++...|++.||.+|++|
T Consensus 184 ~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~vPVD~va~aI 249 (249)
T PF07993_consen 184 QRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDPDARLDLVPVDYVARAI 249 (249)
T ss_dssp HHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB---TT--EEEHHHHHHHH
T ss_pred hcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCCCCceEeEECHHHHHhhC
Confidence 888999999999999995443321 11222 3334444554433 23468999999999986
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.60 E-value=6.8e-15 Score=126.30 Aligned_cols=162 Identities=15% Similarity=0.160 Sum_probs=110.4
Q ss_pred chhHhHHHHHHHHHHHhcC-CCEEEEccchhhhccCCCCCCCccccCCCCC----------------------Ch-----
Q 026418 2 VEPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWS----------------------DL----- 53 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~----------------------~~----- 53 (239)
+++|+.|+.+|+++|++.+ +++|||+|| +.+||...+. +.|.... ++
T Consensus 240 ~~vNV~GT~nLLelA~~~~~lk~fV~vST-ayVyG~~~G~----i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~ 314 (605)
T PLN02503 240 IDINTRGPCHLMSFAKKCKKLKLFLQVST-AYVNGQRQGR----IMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIK 314 (605)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCeEEEccC-ceeecCCCCe----eeeeecCcccccccccccccccccccccCCHHHHHH
Confidence 4689999999999999875 789999999 6999876432 2222211 00
Q ss_pred ------h--------------------hcccCCchHHHHHHHHHHHHHHHHHHcCccEEEEecCcccCCCCCC------C
Q 026418 54 ------E--------------------FCKNTKNWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQS------T 101 (239)
Q Consensus 54 ------~--------------------~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~------~ 101 (239)
. .-..-.+.|..+|.++|.+++++. .+++++|+||+.|.+....+ +
T Consensus 315 ~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~TK~lAE~lV~~~~--~~LPv~IvRPsiV~st~~eP~pGw~d~ 392 (605)
T PLN02503 315 LALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVFTKAMGEMVINSMR--GDIPVVIIRPSVIESTWKDPFPGWMEG 392 (605)
T ss_pred HHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEcCCEecccccCCccccccC
Confidence 0 001123789999999999998764 48999999999994422111 1
Q ss_pred CChhHHHHHHHHcCCCCc-c--CCCCCCceehHHHHHHHHHhhcC-C---C-CCceEEEe-c--CCCCHHHHHHHHHHhC
Q 026418 102 VNASIIHILKYLNGSAKT-Y--ANSVQAYVHVRDVALAHILVYET-P---S-ASGRYLCA-E--SVLHRGEVVEILAKFF 170 (239)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~-~--~~~~~~~i~v~D~a~~~~~~~~~-~---~-~~~~y~~~-~--~~~s~~el~~~i~~~~ 170 (239)
.......+....+|.... . ++...|+|+||.|+++++.++.. . . ...+||++ + +++++.++.+.+.+.+
T Consensus 393 ~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~vvna~i~a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~ 472 (605)
T PLN02503 393 NRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADMVVNATLAAMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHY 472 (605)
T ss_pred ccccchhhhheeccceeEEEeCCCeeEeEEeecHHHHHHHHHHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHH
Confidence 111111222223454332 2 45678999999999999998432 1 1 22399987 5 8999999999999876
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=2e-13 Score=118.75 Aligned_cols=163 Identities=17% Similarity=0.105 Sum_probs=108.8
Q ss_pred hhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHcC
Q 026418 3 EPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVARG 82 (239)
Q Consensus 3 ~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~ 82 (239)
++|+.++.|++++|++.++ ++||+||. ||... .| ..+|.++.. .+
T Consensus 77 ~vNv~Gt~nLleAA~~~Gv-RiV~~SS~---~G~~~-----------------------~~----~~aE~ll~~----~~ 121 (699)
T PRK12320 77 GVGITGLAHVANAAARAGA-RLLFVSQA---AGRPE-----------------------LY----RQAETLVST----GW 121 (699)
T ss_pred hHHHHHHHHHHHHHHHcCC-eEEEEECC---CCCCc-----------------------cc----cHHHHHHHh----cC
Confidence 4799999999999999997 79999983 23210 01 136666543 46
Q ss_pred ccEEEEecCcccCCCCCCCCC-hhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCceEEEe-cCCCCHH
Q 026418 83 VDLVVVNPVLVLGPLLQSTVN-ASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCA-ESVLHRG 160 (239)
Q Consensus 83 ~~~~i~Rp~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~~ 160 (239)
++++++|++++||+....... .....+....++++ ..+|||+|++++++.+++... .|+||++ ++.+|+.
T Consensus 122 ~p~~ILR~~nVYGp~~~~~~~r~I~~~l~~~~~~~p-------I~vIyVdDvv~alv~al~~~~-~GiyNIG~~~~~Si~ 193 (699)
T PRK12320 122 APSLVIRIAPPVGRQLDWMVCRTVATLLRSKVSARP-------IRVLHLDDLVRFLVLALNTDR-NGVVDLATPDTTNVV 193 (699)
T ss_pred CCEEEEeCceecCCCCcccHhHHHHHHHHHHHcCCc-------eEEEEHHHHHHHHHHHHhCCC-CCEEEEeCCCeeEHH
Confidence 899999999999996543211 12222333333433 336999999999999997543 4599887 7899999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCCCcccChHHHHh-hCCce-eCH--HHHHHHH
Q 026418 161 EVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKD-LGLEF-TPV--KQCLYET 214 (239)
Q Consensus 161 el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p-~~~--~e~i~~~ 214 (239)
|+++.+....|...+. .........-|....+. ++|.| ..+ .+.+.++
T Consensus 194 el~~~i~~~~p~~~~~------~~~~~~~~~pdi~~a~~~~~w~~~~~~~~~~~~~~~ 245 (699)
T PRK12320 194 TAWRLLRSVDPHLRTR------RVRSWEQLIPEVDIAAVQEDWNFEFGWQATEAIVDT 245 (699)
T ss_pred HHHHHHHHhCCCcccc------ccccHHHhCCCCchhhhhcCCCCcchHHHHHHHHhh
Confidence 9999998874322221 11122334556666655 78998 655 4556665
|
|
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.53 E-value=7.5e-14 Score=106.36 Aligned_cols=191 Identities=19% Similarity=0.233 Sum_probs=131.4
Q ss_pred CchhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHH
Q 026418 1 MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA 80 (239)
Q Consensus 1 ~~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 80 (239)
+.++|+.+.+.|...|++.|+.||||+|+. . .+ ....+.|-.+|.++|..+++.
T Consensus 149 f~Dvn~~~aerlAricke~GVerfIhvS~L-g---an-------------------v~s~Sr~LrsK~~gE~aVrda--- 202 (391)
T KOG2865|consen 149 FEDVNVHIAERLARICKEAGVERFIHVSCL-G---AN-------------------VKSPSRMLRSKAAGEEAVRDA--- 202 (391)
T ss_pred cccccchHHHHHHHHHHhhChhheeehhhc-c---cc-------------------ccChHHHHHhhhhhHHHHHhh---
Confidence 357999999999999999999999999997 2 11 023567999999999999875
Q ss_pred cCccEEEEecCcccCCCCCCCCChhHHHHHHHHc--CCCCccCCC---CCCceehHHHHHHHHHhhcCCCCCc-eEE-Ee
Q 026418 81 RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLN--GSAKTYANS---VQAYVHVRDVALAHILVYETPSASG-RYL-CA 153 (239)
Q Consensus 81 ~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~~---~~~~i~v~D~a~~~~~~~~~~~~~~-~y~-~~ 153 (239)
=...+|+||+.+||..+.. ...+..+++ +-.+.++.| ....|||-|||.+++.+++.+...| +|- ++
T Consensus 203 -fPeAtIirPa~iyG~eDrf-----ln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~s~Gktye~vG 276 (391)
T KOG2865|consen 203 -FPEATIIRPADIYGTEDRF-----LNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPDSMGKTYEFVG 276 (391)
T ss_pred -CCcceeechhhhcccchhH-----HHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhccCccccCceeeecC
Confidence 3578999999999986532 122223333 222334444 3458999999999999999988777 995 55
Q ss_pred cCCCCHHHHHHHHHHhCCCC------CCCCCC------------CCCCC---------CCCCCcccChHH-HHhhCCcee
Q 026418 154 ESVLHRGEVVEILAKFFPEY------PIPTKC------------SDEKN---------PRKKPYKFSNQK-LKDLGLEFT 205 (239)
Q Consensus 154 ~~~~s~~el~~~i~~~~~~~------~~~~~~------------~~~~~---------~~~~~~~~~~~k-~~~lg~~p~ 205 (239)
+..+.+.||++.+.+....+ +.|... .+... .......++... +.+||..++
T Consensus 277 P~~yql~eLvd~my~~~~~~~ry~r~~mP~f~a~a~~~~f~~~pf~~~~pln~d~ie~~~v~~~vlt~~~tleDLgv~~t 356 (391)
T KOG2865|consen 277 PDRYQLSELVDIMYDMAREWPRYVRLPMPIFKAMAAARDFMIVPFPPPSPLNRDQIERLTVTDLVLTGAPTLEDLGVVLT 356 (391)
T ss_pred CchhhHHHHHHHHHHHHhhccccccCCcHHHHHHHhhhheeecCCCCCCCCCHHHhhheeehhhhcCCCCcHhhcCceee
Confidence 78899999999988864221 221110 00000 011223333333 567999999
Q ss_pred CHHHHHHHHHHHHHHcCC
Q 026418 206 PVKQCLYETVKSLQEKGH 223 (239)
Q Consensus 206 ~~~e~i~~~~~~~~~~g~ 223 (239)
+++..--+.+..|+..|.
T Consensus 357 ~le~~~~e~l~~yR~~~~ 374 (391)
T KOG2865|consen 357 KLELYPVEFLRQYRKGGR 374 (391)
T ss_pred ecccccHHHHHHHhhccc
Confidence 998888777776666544
|
|
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.52 E-value=3.2e-13 Score=100.98 Aligned_cols=201 Identities=13% Similarity=0.032 Sum_probs=141.1
Q ss_pred hhHhHHHHHHHHHHHhcC---CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 3 EPAVIGTKNVIVAAAEAK---VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 3 ~~Nv~~t~~ll~a~~~~~---v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
++..-||..||+|.+..+ --||--.|| +..||..... |.+|.+|+ -|+++|+.+|..+-=++-+|.+
T Consensus 131 eVdavGtLRlLdAi~~c~l~~~VrfYQAst-SElyGkv~e~---PQsE~TPF------yPRSPYa~aKmy~~WivvNyRE 200 (376)
T KOG1372|consen 131 EVDAVGTLRLLDAIRACRLTEKVRFYQAST-SELYGKVQEI---PQSETTPF------YPRSPYAAAKMYGYWIVVNYRE 200 (376)
T ss_pred eccchhhhhHHHHHHhcCcccceeEEeccc-HhhcccccCC---CcccCCCC------CCCChhHHhhhhheEEEEEhHH
Confidence 355679999999998876 247888888 7999976554 88999985 5699999999999888888877
Q ss_pred HcCccEEEEecCcccCCCCCCCCChhHHHHHH----HHcCCC--CccC--CCCCCceehHHHHHHHHHhhcCCCCCceE-
Q 026418 80 ARGVDLVVVNPVLVLGPLLQSTVNASIIHILK----YLNGSA--KTYA--NSVQAYVHVRDVALAHILVYETPSASGRY- 150 (239)
Q Consensus 80 ~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~----~~~~~~--~~~~--~~~~~~i~v~D~a~~~~~~~~~~~~~~~y- 150 (239)
.+++-.|-=-+++-=.|.+..+ +....+.+ +.-|+. +..| +..+||-|..|-++++++.+++..+. -|
T Consensus 201 AYnmfAcNGILFNHESPRRGen--FVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA~dYVEAMW~mLQ~d~Pd-DfV 277 (376)
T KOG1372|consen 201 AYNMFACNGILFNHESPRRGEN--FVTRKITRSVAKISLGQQEKIELGNLSALRDWGHAGDYVEAMWLMLQQDSPD-DFV 277 (376)
T ss_pred hhcceeeccEeecCCCCccccc--hhhHHHHHHHHHhhhcceeeEEecchhhhcccchhHHHHHHHHHHHhcCCCC-ceE
Confidence 7777666544455545544322 22222322 222322 2234 46899999999999999999877654 55
Q ss_pred EEecCCCCHHHHHHHHHHhCCCCCCCCC--------------------CCCCCCCCCCCcccChHHHHh-hCCce-eCHH
Q 026418 151 LCAESVLHRGEVVEILAKFFPEYPIPTK--------------------CSDEKNPRKKPYKFSNQKLKD-LGLEF-TPVK 208 (239)
Q Consensus 151 ~~~~~~~s~~el~~~i~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~k~~~-lg~~p-~~~~ 208 (239)
+++|+..|++|+.+.-...+ +..+... ....+.-....+.-|.+|+++ |||+| .++.
T Consensus 278 iATge~hsVrEF~~~aF~~i-g~~l~Weg~gv~~~~~n~~g~v~V~v~~kYyRPtEVd~LqGdasKAk~~LgW~pkv~f~ 356 (376)
T KOG1372|consen 278 IATGEQHSVREFCNLAFAEI-GEVLNWEGEGVDEVGKNDDGVVRVKVDPKYYRPTEVDTLQGDASKAKKTLGWKPKVTFP 356 (376)
T ss_pred EecCCcccHHHHHHHHHHhh-CcEEeecccccccccccCCceEEEEecccccCcchhhhhcCChHHHHHhhCCCCccCHH
Confidence 55699999999999877765 2211111 000122234567779999977 99999 9999
Q ss_pred HHHHHHHHH
Q 026418 209 QCLYETVKS 217 (239)
Q Consensus 209 e~i~~~~~~ 217 (239)
+.+++|+..
T Consensus 357 eLVkeMv~~ 365 (376)
T KOG1372|consen 357 ELVKEMVAS 365 (376)
T ss_pred HHHHHHHHh
Confidence 999999864
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.3e-13 Score=107.55 Aligned_cols=132 Identities=17% Similarity=0.201 Sum_probs=90.1
Q ss_pred hHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHH-cCcc
Q 026418 6 VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA-RGVD 84 (239)
Q Consensus 6 v~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-~~~~ 84 (239)
...+.+++++|+++|++|||++||. .++.. . + .+...|+.+ ++ .|++
T Consensus 82 ~~~~~~~i~aa~~~gv~~~V~~Ss~-~~~~~---~---~---------------------~~~~~~~~l----~~~~gi~ 129 (285)
T TIGR03649 82 APPMIKFIDFARSKGVRRFVLLSAS-IIEKG---G---P---------------------AMGQVHAHL----DSLGGVE 129 (285)
T ss_pred hHHHHHHHHHHHHcCCCEEEEeecc-ccCCC---C---c---------------------hHHHHHHHH----HhccCCC
Confidence 3567899999999999999999994 43210 0 0 112234433 33 4899
Q ss_pred EEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCc--cCCCCCCceehHHHHHHHHHhhcCCCCCc-eEEEe-cCCCCHH
Q 026418 85 LVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKT--YANSVQAYVHVRDVALAHILVYETPSASG-RYLCA-ESVLHRG 160 (239)
Q Consensus 85 ~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~y~~~-~~~~s~~ 160 (239)
++++||+.++++.... .....+.....+. .+++..+|+|++|+|++++.++..+...+ +|++. ++.+|+.
T Consensus 130 ~tilRp~~f~~~~~~~------~~~~~~~~~~~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~l~g~~~~s~~ 203 (285)
T TIGR03649 130 YTVLRPTWFMENFSEE------FHVEAIRKENKIYSATGDGKIPFVSADDIARVAYRALTDKVAPNTDYVVLGPELLTYD 203 (285)
T ss_pred EEEEeccHHhhhhccc------ccccccccCCeEEecCCCCccCcccHHHHHHHHHHHhcCCCcCCCeEEeeCCccCCHH
Confidence 9999999998653111 0111122222222 35778899999999999999998765444 88766 6899999
Q ss_pred HHHHHHHHhCCCCCCC
Q 026418 161 EVVEILAKFFPEYPIP 176 (239)
Q Consensus 161 el~~~i~~~~~~~~~~ 176 (239)
|+++.+.+.+ +.+++
T Consensus 204 eia~~l~~~~-g~~v~ 218 (285)
T TIGR03649 204 DVAEILSRVL-GRKIT 218 (285)
T ss_pred HHHHHHHHHh-CCceE
Confidence 9999999997 55443
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.1e-12 Score=104.46 Aligned_cols=162 Identities=21% Similarity=0.139 Sum_probs=104.2
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCC-ccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPD-DVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA 80 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~-~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 80 (239)
...||.||..+++.|...+.|.|+|+||+ +++........ ...+|.++. ......+.++|+.||+.+|.++++...+
T Consensus 108 ~~~NVlGT~evlrLa~~gk~Kp~~yVSsi-sv~~~~~~~~~~~~~~~~~~~-~~~~~~~~~GY~~SKwvaE~Lvr~A~~r 185 (382)
T COG3320 108 RGANVLGTAEVLRLAATGKPKPLHYVSSI-SVGETEYYSNFTVDFDEISPT-RNVGQGLAGGYGRSKWVAEKLVREAGDR 185 (382)
T ss_pred cCcchHhHHHHHHHHhcCCCceeEEEeee-eeccccccCCCcccccccccc-ccccCccCCCcchhHHHHHHHHHHHhhc
Confidence 46899999999999999888999999996 88865543311 111211111 1122456788999999999999999877
Q ss_pred cCccEEEEecCcccCCCCCCCCChhHHHHHHHHc-----CCCCccCCCCCCceeh-----------HHHHHHHHHhhcCC
Q 026418 81 RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLN-----GSAKTYANSVQAYVHV-----------RDVALAHILVYETP 144 (239)
Q Consensus 81 ~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~i~v-----------~D~a~~~~~~~~~~ 144 (239)
|++++|+||++|.|...++..+.. .++.+++. |..+.. ....+.+.+ .-+++++..+..++
T Consensus 186 -GLpv~I~Rpg~I~gds~tG~~n~~-D~~~Rlv~~~~~lg~~P~~-~~~~~~~p~~~v~~~v~~~~~~~~~~~~~l~~~~ 262 (382)
T COG3320 186 -GLPVTIFRPGYITGDSRTGALNTR-DFLTRLVLGLLQLGIAPDS-EYSLDMLPVDHVARAVVAPSVQVAEAIAALGAHS 262 (382)
T ss_pred -CCCeEEEecCeeeccCccCccccc-hHHHHHHHHHHHhCCCCCc-ccchhhCccceeeEEeehhhhhHHHHHHHhccCc
Confidence 999999999999998875544432 23333333 333321 112222222 22333444444344
Q ss_pred CC-CceEEEe--cCCCCHHHHHHHHHH
Q 026418 145 SA-SGRYLCA--ESVLHRGEVVEILAK 168 (239)
Q Consensus 145 ~~-~~~y~~~--~~~~s~~el~~~i~~ 168 (239)
.. .+.|.+. |..+...++.+.+.+
T Consensus 263 ~~~f~~~~~~~~~~~i~l~~~~~w~~~ 289 (382)
T COG3320 263 DIRFNQLHMLTHPDEIGLDEYVDWLIS 289 (382)
T ss_pred cchhhheecccCCCccchhHHHHhHhh
Confidence 32 2356543 888999999998887
|
|
| >KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.44 E-value=6.3e-13 Score=98.09 Aligned_cols=197 Identities=20% Similarity=0.210 Sum_probs=129.7
Q ss_pred hHhHHHHHHHHHHHhcC--CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 4 PAVIGTKNVIVAAAEAK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 4 ~Nv~~t~~ll~a~~~~~--v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
..+..|+.|.++..++. .+.+|.+|.+ ++|-..... .++|+++. +..+...+--..-|...+... .
T Consensus 103 SRi~~t~~la~aI~~aPq~~~~~Vlv~gv-a~y~pS~s~---eY~e~~~~------qgfd~~srL~l~WE~aA~~~~--~ 170 (315)
T KOG3019|consen 103 SRIRVTSKLADAINNAPQEARPTVLVSGV-AVYVPSESQ---EYSEKIVH------QGFDILSRLCLEWEGAALKAN--K 170 (315)
T ss_pred ceeeHHHHHHHHHhcCCCCCCCeEEEEee-EEecccccc---cccccccc------CChHHHHHHHHHHHHHhhccC--c
Confidence 34667889999999887 4689999996 999665544 67777652 222222222223333333222 2
Q ss_pred CccEEEEecCcccCCCCCCCCChhH-HHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCceEEEe-cCCCCH
Q 026418 82 GVDLVVVNPVLVLGPLLQSTVNASI-IHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCA-ESVLHR 159 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~ 159 (239)
.++.+++|.|.|.|.+. ..... ...-++.-|.++.-|++.+.|||++|++..+..+++++...|+.|.. +++++.
T Consensus 171 ~~r~~~iR~GvVlG~gG---Ga~~~M~lpF~~g~GGPlGsG~Q~fpWIHv~DL~~li~~ale~~~v~GViNgvAP~~~~n 247 (315)
T KOG3019|consen 171 DVRVALIRIGVVLGKGG---GALAMMILPFQMGAGGPLGSGQQWFPWIHVDDLVNLIYEALENPSVKGVINGVAPNPVRN 247 (315)
T ss_pred ceeEEEEEEeEEEecCC---cchhhhhhhhhhccCCcCCCCCeeeeeeehHHHHHHHHHHHhcCCCCceecccCCCccch
Confidence 58999999999999852 11111 12234555667667778889999999999999999998888988877 899999
Q ss_pred HHHHHHHHHhCCCC---CCCCCCCCCCC-CCCCCcccC-----hHHHHhhCCce--eCHHHHHHHHH
Q 026418 160 GEVVEILAKFFPEY---PIPTKCSDEKN-PRKKPYKFS-----NQKLKDLGLEF--TPVKQCLYETV 215 (239)
Q Consensus 160 ~el~~~i~~~~~~~---~~~~~~~~~~~-~~~~~~~~~-----~~k~~~lg~~p--~~~~e~i~~~~ 215 (239)
.|+.+.+.+.+..- ++|........ ..-....+. ..|+.++||++ ..+.+++++.+
T Consensus 248 ~Ef~q~lg~aL~Rp~~~pvP~fvvqA~fG~erA~~vLeGqKV~Pqral~~Gf~f~yp~vk~Al~~i~ 314 (315)
T KOG3019|consen 248 GEFCQQLGSALSRPSWLPVPDFVVQALFGPERATVVLEGQKVLPQRALELGFEFKYPYVKDALRAIM 314 (315)
T ss_pred HHHHHHHHHHhCCCcccCCcHHHHHHHhCccceeEEeeCCcccchhHhhcCceeechHHHHHHHHHh
Confidence 99999999998321 33221110000 111223333 34456689987 66888888764
|
|
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.28 E-value=2.7e-11 Score=99.96 Aligned_cols=166 Identities=20% Similarity=0.245 Sum_probs=111.9
Q ss_pred chhHhHHHHHHHHHHHhcC-CCEEEEccchhhhccCCCCC-CCccccCCCCCChh--------------------hcccC
Q 026418 2 VEPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRS-PDDVVDESCWSDLE--------------------FCKNT 59 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~-v~~~i~~Ss~~~vy~~~~~~-~~~~~~E~~~~~~~--------------------~~~~~ 59 (239)
+.+|+.||+++++.|++.. .+-++|+|| +.+- ...+. .+.+..+....+++ .-...
T Consensus 127 l~iNt~Gt~~~l~lak~~~~l~~~vhVST-Ay~n-~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~ 204 (467)
T KOG1221|consen 127 LGINTRGTRNVLQLAKEMVKLKALVHVST-AYSN-CNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGW 204 (467)
T ss_pred hhhhhHhHHHHHHHHHHhhhhheEEEeeh-hhee-cccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCC
Confidence 3579999999999999987 899999999 4544 21111 11122221111111 01234
Q ss_pred CchHHHHHHHHHHHHHHHHHHcCccEEEEecCcccCCCCCC------CCChhHHHHHHHHcCCCCcc---CCCCCCceeh
Q 026418 60 KNWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQS------TVNASIIHILKYLNGSAKTY---ANSVQAYVHV 130 (239)
Q Consensus 60 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~------~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~v 130 (239)
.+.|..+|..+|.++..++ .+++++|+||+.|......+ +.......+...-+|....+ +++..|+|.|
T Consensus 205 PNTYtfTKal~E~~i~~~~--~~lPivIiRPsiI~st~~EP~pGWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPv 282 (467)
T KOG1221|consen 205 PNTYTFTKALAEMVIQKEA--ENLPLVIIRPSIITSTYKEPFPGWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPV 282 (467)
T ss_pred CCceeehHhhHHHHHHhhc--cCCCeEEEcCCceeccccCCCCCccccCCCCceEEEEeccceEEEEEEccccccceeeH
Confidence 6789999999999998875 48999999999999865443 22222233334444443332 4678899999
Q ss_pred HHHHHHHHHhhc----CCCC--CceEEEe---cCCCCHHHHHHHHHHhCC
Q 026418 131 RDVALAHILVYE----TPSA--SGRYLCA---ESVLHRGEVVEILAKFFP 171 (239)
Q Consensus 131 ~D~a~~~~~~~~----~~~~--~~~y~~~---~~~~s~~el~~~i~~~~~ 171 (239)
|.|+.+++.+.. +... ..+|+++ ..+++++++.+...+.+.
T Consensus 283 D~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~~~~e~~~~~~~ 332 (467)
T KOG1221|consen 283 DMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWGDFIELALRYFE 332 (467)
T ss_pred HHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcccHHHHHHHHHHhcc
Confidence 999999987662 1111 2299887 378999999999999864
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.4e-10 Score=91.89 Aligned_cols=142 Identities=18% Similarity=0.125 Sum_probs=97.1
Q ss_pred chhHhHHHHHHHHHH----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++ ++.+.+++|++||.++..+ . .+.+.|+.+|...|.+++.+
T Consensus 104 ~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~----~-----------------~~~~~Y~~sK~a~~~~~~~l 162 (276)
T PRK06482 104 IDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIA----Y-----------------PGFSLYHATKWGIEGFVEAV 162 (276)
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccC----C-----------------CCCchhHHHHHHHHHHHHHH
Confidence 468999999999997 5556789999999522111 0 13578999999999999888
Q ss_pred HHH---cCccEEEEecCcc---cCCCCCCCC------ChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC
Q 026418 78 AVA---RGVDLVVVNPVLV---LGPLLQSTV------NASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS 145 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v---~G~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 145 (239)
+++ .|++++++||+.+ ||++..... ......+.+.+..... .-+.+++|++++++.++....
T Consensus 163 ~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~d~~~~~~a~~~~~~~~~ 236 (276)
T PRK06482 163 AQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSF------AIPGDPQKMVQAMIASADQTP 236 (276)
T ss_pred HHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhccC------CCCCCHHHHHHHHHHHHcCCC
Confidence 765 5899999999988 665432110 0011122222222211 114679999999999998665
Q ss_pred CCceEEEe-cCCCCHHHHHHHHHHhC
Q 026418 146 ASGRYLCA-ESVLHRGEVVEILAKFF 170 (239)
Q Consensus 146 ~~~~y~~~-~~~~s~~el~~~i~~~~ 170 (239)
....|+++ +...++.|++..+.+.+
T Consensus 237 ~~~~~~~g~~~~~~~~~~~~~~~~~~ 262 (276)
T PRK06482 237 APRRLTLGSDAYASIRAALSERLAAL 262 (276)
T ss_pred CCeEEecChHHHHHHHHHHHHHHHHH
Confidence 55588887 67778877777666654
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=3.8e-10 Score=88.24 Aligned_cols=139 Identities=17% Similarity=0.102 Sum_probs=92.1
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+++|..++.++++++++.+++++|++||. ++|+...+. +..+... ...+...|...|..+|++++ +.
T Consensus 105 ~~~n~~~~~~ll~a~~~~~~~~iV~iSS~-~v~g~~~~~---~~~~~~~-----~~~~~~~~~~~k~~~e~~l~----~~ 171 (251)
T PLN00141 105 WKVDNFGTVNLVEACRKAGVTRFILVSSI-LVNGAAMGQ---ILNPAYI-----FLNLFGLTLVAKLQAEKYIR----KS 171 (251)
T ss_pred eeeehHHHHHHHHHHHHcCCCEEEEEccc-cccCCCccc---ccCcchh-----HHHHHHHHHHHHHHHHHHHH----hc
Confidence 35688999999999999999999999995 888754322 2221110 00122335567888887764 35
Q ss_pred CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCc-cCC-CCCCceehHHHHHHHHHhhcCCCCCc-eEEEe----c
Q 026418 82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKT-YAN-SVQAYVHVRDVALAHILVYETPSASG-RYLCA----E 154 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~i~v~D~a~~~~~~~~~~~~~~-~y~~~----~ 154 (239)
+++++++||+.+++...... ... .+. ....+++.+|+|+++..++..+...+ ++.+. +
T Consensus 172 gi~~~iirpg~~~~~~~~~~---------------~~~~~~~~~~~~~i~~~dvA~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (251)
T PLN00141 172 GINYTIVRPGGLTNDPPTGN---------------IVMEPEDTLYEGSISRDQVAEVAVEALLCPESSYKVVEIVARADA 236 (251)
T ss_pred CCcEEEEECCCccCCCCCce---------------EEECCCCccccCcccHHHHHHHHHHHhcChhhcCcEEEEecCCCC
Confidence 89999999999997642111 000 011 12347999999999999998766544 66443 2
Q ss_pred CCCCHHHHHHHHHH
Q 026418 155 SVLHRGEVVEILAK 168 (239)
Q Consensus 155 ~~~s~~el~~~i~~ 168 (239)
...++.+|...+++
T Consensus 237 ~~~~~~~~~~~~~~ 250 (251)
T PLN00141 237 PKRSYKDLFASIKQ 250 (251)
T ss_pred CchhHHHHHHHhhc
Confidence 34688888877654
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.6e-10 Score=84.78 Aligned_cols=109 Identities=31% Similarity=0.344 Sum_probs=78.2
Q ss_pred hHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHcCccE
Q 026418 6 VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVARGVDL 85 (239)
Q Consensus 6 v~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 85 (239)
...+++++++|++++++++|++|| ..+|...... ...+.. .....|...|..+|+.++ +.+++|
T Consensus 75 ~~~~~~~~~a~~~~~~~~~v~~s~-~~~~~~~~~~---~~~~~~--------~~~~~~~~~~~~~e~~~~----~~~~~~ 138 (183)
T PF13460_consen 75 VDAAKNIIEAAKKAGVKRVVYLSS-AGVYRDPPGL---FSDEDK--------PIFPEYARDKREAEEALR----ESGLNW 138 (183)
T ss_dssp HHHHHHHHHHHHHTTSSEEEEEEE-TTGTTTCTSE---EEGGTC--------GGGHHHHHHHHHHHHHHH----HSTSEE
T ss_pred ccccccccccccccccccceeeec-cccCCCCCcc---cccccc--------cchhhhHHHHHHHHHHHH----hcCCCE
Confidence 567899999999999999999999 4888754432 122221 112568899999988874 459999
Q ss_pred EEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 86 VVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 86 ~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
+++||+.+||+..... .. ... -+.....+||++|+|++++.++++
T Consensus 139 ~ivrp~~~~~~~~~~~-~~--------~~~----~~~~~~~~i~~~DvA~~~~~~l~~ 183 (183)
T PF13460_consen 139 TIVRPGWIYGNPSRSY-RL--------IKE----GGPQGVNFISREDVAKAIVEALEN 183 (183)
T ss_dssp EEEEESEEEBTTSSSE-EE--------ESS----TSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred EEEECcEeEeCCCcce-eE--------Eec----cCCCCcCcCCHHHHHHHHHHHhCC
Confidence 9999999999863211 00 000 223345899999999999998863
|
... |
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=5.9e-09 Score=81.88 Aligned_cols=127 Identities=22% Similarity=0.221 Sum_probs=85.0
Q ss_pred chhHhHH----HHHHHHHH-HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIG----TKNVIVAA-AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~----t~~ll~a~-~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.+ ++++++++ ++.+.+++|++||..+.++. .+...|+.+|...+.+++.
T Consensus 112 ~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~---------------------~~~~~y~~sk~a~~~~~~~ 170 (262)
T PRK13394 112 QAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEAS---------------------PLKSAYVTAKHGLLGLARV 170 (262)
T ss_pred HHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCC---------------------CCCcccHHHHHHHHHHHHH
Confidence 4578988 77778877 66668899999996322210 1246799999999999888
Q ss_pred HHHH---cCccEEEEecCcccCCCCCCCCCh--------hHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC
Q 026418 77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNA--------SIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS 145 (239)
Q Consensus 77 ~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 145 (239)
++.+ .+++++++||+.++++........ .......++.+ +....+|++++|++++++.++....
T Consensus 171 la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~dva~a~~~l~~~~~ 245 (262)
T PRK13394 171 LAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLG-----KTVDGVFTTVEDVAQTVLFLSSFPS 245 (262)
T ss_pred HHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhc-----CCCCCCCCCHHHHHHHHHHHcCccc
Confidence 8765 489999999999998753211000 00111112211 1234679999999999999987543
Q ss_pred C--Cc-eEEEec
Q 026418 146 A--SG-RYLCAE 154 (239)
Q Consensus 146 ~--~~-~y~~~~ 154 (239)
. .| .|++.+
T Consensus 246 ~~~~g~~~~~~~ 257 (262)
T PRK13394 246 AALTGQSFVVSH 257 (262)
T ss_pred cCCcCCEEeeCC
Confidence 2 24 666663
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.00 E-value=1e-08 Score=80.15 Aligned_cols=125 Identities=16% Similarity=0.160 Sum_probs=84.2
Q ss_pred chhHhHHHHHHHHHH----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
++.|+.++..+++++ ++.+++++|++||. ..+... .....|+.+|...+.+++.+
T Consensus 106 ~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~-~~~~~~--------------------~~~~~y~~sk~a~~~~~~~~ 164 (255)
T TIGR01963 106 IAIMLTSAFHTIRAALPHMKKQGWGRIINIASA-HGLVAS--------------------PFKSAYVAAKHGLIGLTKVL 164 (255)
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcch-hhcCCC--------------------CCCchhHHHHHHHHHHHHHH
Confidence 457999988887777 55678899999995 433211 01356999999999998877
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCC----------ccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAK----------TYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
+.+ .+++++++||+.++++.... .+......... ..+...++++|++|+|++++.++...
T Consensus 165 ~~~~~~~~i~v~~i~pg~v~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~ 237 (255)
T TIGR01963 165 ALEVAAHGITVNAICPGYVRTPLVEK-------QIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEVAETALFLASDA 237 (255)
T ss_pred HHHhhhcCeEEEEEecCccccHHHHH-------HHHhhhcccCCCchHHHHHHHHccCccccCcCHHHHHHHHHHHcCcc
Confidence 654 48999999999999874211 11111111000 01234567999999999999999764
Q ss_pred C--CCc-eEEEec
Q 026418 145 S--ASG-RYLCAE 154 (239)
Q Consensus 145 ~--~~~-~y~~~~ 154 (239)
. ..| .|++++
T Consensus 238 ~~~~~g~~~~~~~ 250 (255)
T TIGR01963 238 AAGITGQAIVLDG 250 (255)
T ss_pred ccCccceEEEEcC
Confidence 2 234 677764
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >KOG4288 consensus Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.00 E-value=5.5e-09 Score=77.68 Aligned_cols=136 Identities=21% Similarity=0.179 Sum_probs=94.6
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
..+|-....+-.++|.++|+++|+|+|-. -||-.+. . ...|-.+|+.+|..+.. .+
T Consensus 135 ~~ing~ani~a~kaa~~~gv~~fvyISa~--d~~~~~~------------------i-~rGY~~gKR~AE~Ell~---~~ 190 (283)
T KOG4288|consen 135 DRINGTANINAVKAAAKAGVPRFVYISAH--DFGLPPL------------------I-PRGYIEGKREAEAELLK---KF 190 (283)
T ss_pred HHhccHhhHHHHHHHHHcCCceEEEEEhh--hcCCCCc------------------c-chhhhccchHHHHHHHH---hc
Confidence 45788888999999999999999999983 3332221 2 23799999999977654 45
Q ss_pred CccEEEEecCcccCCCCCCCCChhH----HHHHHHHcCC------CCccCCCCCCceehHHHHHHHHHhhcCCCCCceEE
Q 026418 82 GVDLVVVNPVLVLGPLLQSTVNASI----IHILKYLNGS------AKTYANSVQAYVHVRDVALAHILVYETPSASGRYL 151 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~~~~~~----~~~~~~~~~~------~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~ 151 (239)
+++-+++|||.+||.+......... .-+.+..++. .+..+.-....+.+++||.+.+.++..++..|+
T Consensus 191 ~~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aal~ai~dp~f~Gv-- 268 (283)
T KOG4288|consen 191 RFRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAALKAIEDPDFKGV-- 268 (283)
T ss_pred CCCceeeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHHHHhccCCCcCce--
Confidence 7899999999999974332221111 2233333333 233466677899999999999999998876654
Q ss_pred EecCCCCHHHHHHHHHH
Q 026418 152 CAESVLHRGEVVEILAK 168 (239)
Q Consensus 152 ~~~~~~s~~el~~~i~~ 168 (239)
+++.|+.++-.+
T Consensus 269 -----v~i~eI~~~a~k 280 (283)
T KOG4288|consen 269 -----VTIEEIKKAAHK 280 (283)
T ss_pred -----eeHHHHHHHHHH
Confidence 455566554443
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=7.5e-09 Score=82.01 Aligned_cols=127 Identities=17% Similarity=0.145 Sum_probs=84.2
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++. +.+..+||++||. ..|... .+...|+.+|.+.|.+++.+
T Consensus 115 ~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~~sK~a~~~l~~~~ 173 (274)
T PRK07775 115 VQIHLVGANRLATAVLPGMIERRRGDLIFVGSD-VALRQR--------------------PHMGAYGAAKAGLEAMVTNL 173 (274)
T ss_pred HHHhhHHHHHHHHHHHHHHHhcCCceEEEECCh-HhcCCC--------------------CCcchHHHHHHHHHHHHHHH
Confidence 4789999999998875 3345689999995 555321 12457999999999999998
Q ss_pred HHHc---CccEEEEecCcccCCC-CCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCceEEEe
Q 026418 78 AVAR---GVDLVVVNPVLVLGPL-LQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCA 153 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~ 153 (239)
++.. |++++++|||.+.++. ...........+....... +.....++|++|+|++++.++.++....+||+.
T Consensus 174 ~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~dva~a~~~~~~~~~~~~~~~~~ 249 (274)
T PRK07775 174 QMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWG----QARHDYFLRASDLARAITFVAETPRGAHVVNME 249 (274)
T ss_pred HHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHhc----ccccccccCHHHHHHHHHHHhcCCCCCCeeEEe
Confidence 7654 8999999998875542 1111011111111111100 122356999999999999999876433377776
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=6.8e-09 Score=82.29 Aligned_cols=145 Identities=15% Similarity=0.086 Sum_probs=94.6
Q ss_pred chhHhHHHHHHHHHH----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..+++++ ++.+.+++|++||. +.+... .....|+.+|...+.+.+.+
T Consensus 105 ~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~-~~~~~~--------------------~~~~~Y~~sKaa~~~~~~~l 163 (275)
T PRK08263 105 IDTNFFGALWVTQAVLPYLREQRSGHIIQISSI-GGISAF--------------------PMSGIYHASKWALEGMSEAL 163 (275)
T ss_pred HHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcCh-hhcCCC--------------------CCccHHHHHHHHHHHHHHHH
Confidence 578999988888776 55667899999996 444211 12467999999999988887
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCC--hhHHHHHHHHcCCCCccCCCCCCc-eehHHHHHHHHHhhcCCCCCceEE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVN--ASIIHILKYLNGSAKTYANSVQAY-VHVRDVALAHILVYETPSASGRYL 151 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-i~v~D~a~~~~~~~~~~~~~~~y~ 151 (239)
+.. .|++++++||+.+..+....... ........+.......+ ....+ ++.+|++++++.++..+...+.|+
T Consensus 164 a~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~p~dva~~~~~l~~~~~~~~~~~ 241 (275)
T PRK08263 164 AQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQW--SERSVDGDPEAAAEALLKLVDAENPPLRLF 241 (275)
T ss_pred HHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHH--HhccCCCCHHHHHHHHHHHHcCCCCCeEEE
Confidence 654 68999999999887654321100 00000111100000001 11234 889999999999999776666665
Q ss_pred Ee--cCCCCHHHHHHHHHHh
Q 026418 152 CA--ESVLHRGEVVEILAKF 169 (239)
Q Consensus 152 ~~--~~~~s~~el~~~i~~~ 169 (239)
++ +..++..++.+.+.+-
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~ 261 (275)
T PRK08263 242 LGSGVLDLAKADYERRLATW 261 (275)
T ss_pred eCchHHHHHHHHHHHHHHHH
Confidence 54 3678888888877763
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=2.9e-09 Score=84.61 Aligned_cols=134 Identities=17% Similarity=0.072 Sum_probs=88.9
Q ss_pred chhHhHHHHHHHHHH----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++ ++.+..++|++||.++.++. .+...|+.+|...+.+++.+
T Consensus 109 ~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~---------------------~~~~~Y~~sK~~~~~~~~~l 167 (280)
T PRK06914 109 FETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGF---------------------PGLSPYVSSKYALEGFSESL 167 (280)
T ss_pred HHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCC---------------------CCCchhHHhHHHHHHHHHHH
Confidence 468999988888885 55667899999996444431 13567999999999998887
Q ss_pred H---HHcCccEEEEecCcccCCCCCCCCC----------hhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 78 A---VARGVDLVVVNPVLVLGPLLQSTVN----------ASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 78 ~---~~~~~~~~i~Rp~~v~G~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
+ ...|++++++||+.+.++....... .....+..+... .......+++++|+|++++.++.++
T Consensus 168 ~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~dva~~~~~~~~~~ 243 (280)
T PRK06914 168 RLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKH----INSGSDTFGNPIDVANLIVEIAESK 243 (280)
T ss_pred HHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHH----HhhhhhccCCHHHHHHHHHHHHcCC
Confidence 6 3458999999999998874321100 000111111100 0112345788999999999999877
Q ss_pred CCCceEEEe-cCCCCHH
Q 026418 145 SASGRYLCA-ESVLHRG 160 (239)
Q Consensus 145 ~~~~~y~~~-~~~~s~~ 160 (239)
.....|+++ +..+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~ 260 (280)
T PRK06914 244 RPKLRYPIGKGVKLMIL 260 (280)
T ss_pred CCCcccccCCchHHHHH
Confidence 655567776 4554433
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=2.1e-08 Score=77.97 Aligned_cols=122 Identities=17% Similarity=0.107 Sum_probs=84.7
Q ss_pred chhHhHHHHHHHHHH----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++ ++.+.+++|++||. ..+... .+...|+.+|...+.+++.+
T Consensus 112 ~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~-~~~~~~--------------------~~~~~y~~sK~~~~~~~~~~ 170 (249)
T PRK12825 112 IDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSV-AGLPGW--------------------PGRSNYAAAKAGLVGLTKAL 170 (249)
T ss_pred HHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcc-ccCCCC--------------------CCchHHHHHHHHHHHHHHHH
Confidence 467999999999887 45668899999996 443111 12467999999999988877
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-eEE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL 151 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~ 151 (239)
++. .+++++++||+.++|+....... ...... .+.. ....+++.+|+++++.+++.+.. ..| +|+
T Consensus 171 ~~~~~~~~i~~~~i~pg~~~~~~~~~~~~--~~~~~~-----~~~~--~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~ 241 (249)
T PRK12825 171 ARELAEYGITVNMVAPGDIDTDMKEATIE--EAREAK-----DAET--PLGRSGTPEDIARAVAFLCSDASDYITGQVIE 241 (249)
T ss_pred HHHHhhcCeEEEEEEECCccCCccccccc--hhHHhh-----hccC--CCCCCcCHHHHHHHHHHHhCccccCcCCCEEE
Confidence 664 58999999999999986433211 111111 1011 12338999999999999997643 234 777
Q ss_pred Ee
Q 026418 152 CA 153 (239)
Q Consensus 152 ~~ 153 (239)
+.
T Consensus 242 i~ 243 (249)
T PRK12825 242 VT 243 (249)
T ss_pred eC
Confidence 66
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=6e-08 Score=76.04 Aligned_cols=140 Identities=16% Similarity=0.029 Sum_probs=94.6
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++. +.+..++|++||. ..+.. . ....|+.+|.+.+.+++.+
T Consensus 105 ~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~-~~~~~-~--------------------~~~~y~~sK~a~~~~~~~~ 162 (257)
T PRK07074 105 NALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSV-NGMAA-L--------------------GHPAYSAAKAGLIHYTKLL 162 (257)
T ss_pred HHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcch-hhcCC-C--------------------CCcccHHHHHHHHHHHHHH
Confidence 3579999988888883 4456789999995 32210 0 1235999999999999998
Q ss_pred HHHc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eEE
Q 026418 78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYL 151 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y~ 151 (239)
+.+. |+++..+||+.++++................... ....++++++|+++++++++... ...| +++
T Consensus 163 a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~ 236 (257)
T PRK07074 163 AVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKW------YPLQDFATPDDVANAVLFLASPAARAITGVCLP 236 (257)
T ss_pred HHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhc------CCCCCCCCHHHHHHHHHHHcCchhcCcCCcEEE
Confidence 7654 6999999999998875321111111122222111 12367999999999999999643 2235 555
Q ss_pred Ee-cCCCCHHHHHHHHHHh
Q 026418 152 CA-ESVLHRGEVVEILAKF 169 (239)
Q Consensus 152 ~~-~~~~s~~el~~~i~~~ 169 (239)
+. |...+.+|+++.+.+.
T Consensus 237 ~~~g~~~~~~~~~~~~~~~ 255 (257)
T PRK07074 237 VDGGLTAGNREMARTLTLE 255 (257)
T ss_pred eCCCcCcCChhhhhhhccc
Confidence 55 6788899999877643
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=2.3e-08 Score=79.36 Aligned_cols=129 Identities=16% Similarity=0.094 Sum_probs=83.9
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.|+.++++++. +.+..++|++||.++..+. .+...|+.+|...|.+++.+
T Consensus 106 ~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~l 164 (277)
T PRK06180 106 FEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITM---------------------PGIGYYCGSKFALEGISESL 164 (277)
T ss_pred HHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCC---------------------CCcchhHHHHHHHHHHHHHH
Confidence 6799999999999854 3456789999996333211 13567999999999998887
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCC----hhHH---HHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVN----ASII---HILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSAS 147 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~----~~~~---~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~ 147 (239)
+.. .|++++++||+.+.++....... .... .+........ ......+..++|+|++++.++..+...
T Consensus 165 a~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~dva~~~~~~l~~~~~~ 241 (277)
T PRK06180 165 AKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQARE---AKSGKQPGDPAKAAQAILAAVESDEPP 241 (277)
T ss_pred HHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHH---hhccCCCCCHHHHHHHHHHHHcCCCCC
Confidence 654 48999999999997764221110 0000 0111100000 011133567999999999999876655
Q ss_pred ceEEEec
Q 026418 148 GRYLCAE 154 (239)
Q Consensus 148 ~~y~~~~ 154 (239)
..|.+++
T Consensus 242 ~~~~~g~ 248 (277)
T PRK06180 242 LHLLLGS 248 (277)
T ss_pred eeEeccH
Confidence 5666653
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=2.2e-08 Score=78.09 Aligned_cols=132 Identities=18% Similarity=0.118 Sum_probs=85.1
Q ss_pred chhHhHHHHHHHHHHHhcC--CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~--v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++.++++++.+.- ..++|++||..+.+.. ..+..+ ....|+.+|...|.+++.++.
T Consensus 106 ~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~--------~~~~~~--------~~~~Y~~sK~a~e~~~~~l~~ 169 (248)
T PRK07806 106 MRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIP--------TVKTMP--------EYEPVARSKRAGEDALRALRP 169 (248)
T ss_pred eEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCc--------cccCCc--------cccHHHHHHHHHHHHHHHHHH
Confidence 5689999999999998752 3589999995232211 111111 146799999999999998865
Q ss_pred H---cCccEEEEecCcccCCCCCCCCC-hhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCc-eEEEec
Q 026418 80 A---RGVDLVVVNPVLVLGPLLQSTVN-ASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASG-RYLCAE 154 (239)
Q Consensus 80 ~---~~~~~~i~Rp~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~y~~~~ 154 (239)
+ .++++.+++|+.+-++....... .....+. ... . ....+++++|+|++++.++......| +|++++
T Consensus 170 ~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~----~~~--~--~~~~~~~~~dva~~~~~l~~~~~~~g~~~~i~~ 241 (248)
T PRK07806 170 ELAEKGIGFVVVSGDMIEGTVTATLLNRLNPGAIE----ARR--E--AAGKLYTVSEFAAEVARAVTAPVPSGHIEYVGG 241 (248)
T ss_pred HhhccCeEEEEeCCccccCchhhhhhccCCHHHHH----HHH--h--hhcccCCHHHHHHHHHHHhhccccCccEEEecC
Confidence 4 47899999988776652110000 0000000 000 0 12469999999999999998665556 788875
Q ss_pred CCC
Q 026418 155 SVL 157 (239)
Q Consensus 155 ~~~ 157 (239)
...
T Consensus 242 ~~~ 244 (248)
T PRK07806 242 ADY 244 (248)
T ss_pred ccc
Confidence 443
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=5.6e-08 Score=76.14 Aligned_cols=125 Identities=16% Similarity=0.185 Sum_probs=81.6
Q ss_pred chhHhHH----HHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIG----TKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~----t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.+ ++.++.++++.+.++||++||.++.++. .+.+.|+.+|...+.+++.+
T Consensus 109 ~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~---------------------~~~~~y~~~k~a~~~~~~~l 167 (258)
T PRK12429 109 IAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGS---------------------AGKAAYVSAKHGLIGLTKVV 167 (258)
T ss_pred HhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCC---------------------CCcchhHHHHHHHHHHHHHH
Confidence 4578888 5555555566678899999996343321 12567999999999888877
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHc--CCCC------cc--CCCCCCceehHHHHHHHHHhhcCC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLN--GSAK------TY--ANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~--~~~~------~~--~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
+.+ .++++.++||+.++++..... +..... +... .+ ....+.+++++|+|+++.+++...
T Consensus 168 ~~~~~~~~i~v~~~~pg~v~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~ 240 (258)
T PRK12429 168 ALEGATHGVTVNAICPGYVDTPLVRKQ-------IPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIADYALFLASFA 240 (258)
T ss_pred HHHhcccCeEEEEEecCCCcchhhhhh-------hhhhccccCCChHHHHHHHHhccCCccccCCHHHHHHHHHHHcCcc
Confidence 554 479999999999998753211 111110 0000 00 123457999999999999988654
Q ss_pred CC--Cc-eEEEec
Q 026418 145 SA--SG-RYLCAE 154 (239)
Q Consensus 145 ~~--~~-~y~~~~ 154 (239)
.. .| .|++.+
T Consensus 241 ~~~~~g~~~~~~~ 253 (258)
T PRK12429 241 AKGVTGQAWVVDG 253 (258)
T ss_pred ccCccCCeEEeCC
Confidence 32 24 666664
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=98.84 E-value=9.1e-08 Score=74.57 Aligned_cols=127 Identities=20% Similarity=0.109 Sum_probs=86.2
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
++.|+.++.++++++. +.+.+++|++||. ..++.. ..+...|+.+|...+.+++.+
T Consensus 111 ~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~-~~~~~~-------------------~~~~~~y~~sK~a~~~~~~~~ 170 (251)
T PRK12826 111 IDVNLTGTFLLTQAALPALIRAGGGRIVLTSSV-AGPRVG-------------------YPGLAHYAASKAGLVGFTRAL 170 (251)
T ss_pred HHHhhHHHHHHHHHHHHHHHHcCCcEEEEEech-HhhccC-------------------CCCccHHHHHHHHHHHHHHHH
Confidence 5689999999998874 4557899999995 443110 012467999999999999887
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCC--Cc-eEE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSA--SG-RYL 151 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~y~ 151 (239)
+.. .+++++++||+.++|+........ .....+....+ ...+++++|+|+++..++..... .| +|+
T Consensus 171 ~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~--~~~~~~~~~~~------~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~ 242 (251)
T PRK12826 171 ALELAARNITVNSVHPGGVDTPMAGNLGDA--QWAEAIAAAIP------LGRLGEPEDIAAAVLFLASDEARYITGQTLP 242 (251)
T ss_pred HHHHHHcCeEEEEEeeCCCCcchhhhcCch--HHHHHHHhcCC------CCCCcCHHHHHHHHHHHhCccccCcCCcEEE
Confidence 654 489999999999999864322111 11112222221 12588999999999998865432 34 777
Q ss_pred EecCC
Q 026418 152 CAESV 156 (239)
Q Consensus 152 ~~~~~ 156 (239)
+.++.
T Consensus 243 ~~~g~ 247 (251)
T PRK12826 243 VDGGA 247 (251)
T ss_pred ECCCc
Confidence 76543
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.2e-07 Score=73.93 Aligned_cols=124 Identities=13% Similarity=0.062 Sum_probs=84.8
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++.. .+..++|++||..+.++. .+...|+.+|.+.+.+++.+
T Consensus 112 ~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~l 170 (247)
T PRK12935 112 IDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGG---------------------FGQTNYSAAKAGMLGFTKSL 170 (247)
T ss_pred HHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCC---------------------CCCcchHHHHHHHHHHHHHH
Confidence 57899999999999874 335689999996343321 12467999999998888777
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC-CCc-eEEE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS-ASG-RYLC 152 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~-~~~-~y~~ 152 (239)
+.+ .++++++++|+.+.++.... ...........+. ....+.+++|+++++++++.... ..| .|++
T Consensus 171 ~~~~~~~~i~v~~v~pg~v~t~~~~~---~~~~~~~~~~~~~------~~~~~~~~edva~~~~~~~~~~~~~~g~~~~i 241 (247)
T PRK12935 171 ALELAKTNVTVNAICPGFIDTEMVAE---VPEEVRQKIVAKI------PKKRFGQADEIAKGVVYLCRDGAYITGQQLNI 241 (247)
T ss_pred HHHHHHcCcEEEEEEeCCCcChhhhh---ccHHHHHHHHHhC------CCCCCcCHHHHHHHHHHHcCcccCccCCEEEe
Confidence 654 38999999999997653211 1111222222222 23568999999999999886542 233 7877
Q ss_pred ecC
Q 026418 153 AES 155 (239)
Q Consensus 153 ~~~ 155 (239)
.+.
T Consensus 242 ~~g 244 (247)
T PRK12935 242 NGG 244 (247)
T ss_pred CCC
Confidence 654
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=98.82 E-value=3e-09 Score=82.26 Aligned_cols=139 Identities=26% Similarity=0.251 Sum_probs=89.7
Q ss_pred HhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHcCcc
Q 026418 5 AVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVARGVD 84 (239)
Q Consensus 5 Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~ 84 (239)
-+....++++||+++||++||+.|. ...+... ... .|..+.-..|...|+.+++ .+++
T Consensus 79 ~~~~~~~li~Aa~~agVk~~v~ss~-~~~~~~~--------~~~---------~p~~~~~~~k~~ie~~l~~----~~i~ 136 (233)
T PF05368_consen 79 ELEQQKNLIDAAKAAGVKHFVPSSF-GADYDES--------SGS---------EPEIPHFDQKAEIEEYLRE----SGIP 136 (233)
T ss_dssp HHHHHHHHHHHHHHHT-SEEEESEE-SSGTTTT--------TTS---------TTHHHHHHHHHHHHHHHHH----CTSE
T ss_pred hhhhhhhHHHhhhccccceEEEEEe-ccccccc--------ccc---------cccchhhhhhhhhhhhhhh----cccc
Confidence 3667899999999999999997444 3333100 001 2234455678888877744 4999
Q ss_pred EEEEecCcccCCCCCCCCChhHHHHHHH--HcCCC--Cc-cCC--CCCCce-ehHHHHHHHHHhhcCCCCC--c-eEEEe
Q 026418 85 LVVVNPVLVLGPLLQSTVNASIIHILKY--LNGSA--KT-YAN--SVQAYV-HVRDVALAHILVYETPSAS--G-RYLCA 153 (239)
Q Consensus 85 ~~i~Rp~~v~G~~~~~~~~~~~~~~~~~--~~~~~--~~-~~~--~~~~~i-~v~D~a~~~~~~~~~~~~~--~-~y~~~ 153 (239)
++++|++..+..... .+... .++.. .. .++ ....++ +.+|++++++.++.++... + .+.++
T Consensus 137 ~t~i~~g~f~e~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~~~~~~~~~ 208 (233)
T PF05368_consen 137 YTIIRPGFFMENLLP--------PFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHNNGKTIFLA 208 (233)
T ss_dssp BEEEEE-EEHHHHHT--------TTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTTEEEEEEEG
T ss_pred ceeccccchhhhhhh--------hhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhcCCEEEEeC
Confidence 999999988753211 01111 11111 12 233 234564 9999999999999887655 3 55677
Q ss_pred cCCCCHHHHHHHHHHhCCCCC
Q 026418 154 ESVLHRGEVVEILAKFFPEYP 174 (239)
Q Consensus 154 ~~~~s~~el~~~i~~~~~~~~ 174 (239)
++.+|..|+++.+.+.+ |.+
T Consensus 209 ~~~~t~~eia~~~s~~~-G~~ 228 (233)
T PF05368_consen 209 GETLTYNEIAAILSKVL-GKK 228 (233)
T ss_dssp GGEEEHHHHHHHHHHHH-TSE
T ss_pred CCCCCHHHHHHHHHHHH-CCc
Confidence 89999999999999986 543
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.3e-07 Score=73.52 Aligned_cols=127 Identities=17% Similarity=0.074 Sum_probs=81.9
Q ss_pred chhHhHHHHHHHHHHHhc---CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA---KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA 78 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~---~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~ 78 (239)
+++|+.++.++++++.+. .-..++++|+. . +. .+ ..+...|+.+|..+|.+++.++
T Consensus 113 ~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~-~--~~------------~~------~~~~~~Y~~sK~~~~~~~~~l~ 171 (249)
T PRK09135 113 FASNLKAPFFLSQAAAPQLRKQRGAIVNITDI-H--AE------------RP------LKGYPVYCAAKAALEMLTRSLA 171 (249)
T ss_pred HHHhchhHHHHHHHHHHHHhhCCeEEEEEeCh-h--hc------------CC------CCCchhHHHHHHHHHHHHHHHH
Confidence 568999999999999642 12345555542 1 11 11 1346789999999999999988
Q ss_pred HHc--CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC-CCCc-eEEEe-
Q 026418 79 VAR--GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP-SASG-RYLCA- 153 (239)
Q Consensus 79 ~~~--~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~-~~~~-~y~~~- 153 (239)
++. +++++++||+.++||....... .........+.+. ..+.+++|+|+++..++... ...| +|+++
T Consensus 172 ~~~~~~i~~~~v~pg~~~~~~~~~~~~--~~~~~~~~~~~~~------~~~~~~~d~a~~~~~~~~~~~~~~g~~~~i~~ 243 (249)
T PRK09135 172 LELAPEVRVNAVAPGAILWPEDGNSFD--EEARQAILARTPL------KRIGTPEDIAEAVRFLLADASFITGQILAVDG 243 (249)
T ss_pred HHHCCCCeEEEEEeccccCccccccCC--HHHHHHHHhcCCc------CCCcCHHHHHHHHHHHcCccccccCcEEEECC
Confidence 764 6899999999999997543222 1222233333321 11234899999996666433 2334 88887
Q ss_pred cCCC
Q 026418 154 ESVL 157 (239)
Q Consensus 154 ~~~~ 157 (239)
|..+
T Consensus 244 g~~~ 247 (249)
T PRK09135 244 GRSL 247 (249)
T ss_pred Ceec
Confidence 4443
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.77 E-value=2.5e-07 Score=73.30 Aligned_cols=140 Identities=19% Similarity=0.096 Sum_probs=93.3
Q ss_pred chhHhHHHHHHHHHHHhc----CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++.+. +..++|++||. ..+... .+.+.|+.+|...|.+++.+
T Consensus 115 ~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~-~~~~~~--------------------~~~~~Y~~sK~a~~~~~~~~ 173 (276)
T PRK05875 115 VDLNVNGTMYVLKHAARELVRGGGGSFVGISSI-AASNTH--------------------RWFGAYGVTKSAVDHLMKLA 173 (276)
T ss_pred HHHhhHHHHHHHHHHHHHHHhcCCcEEEEEech-hhcCCC--------------------CCCcchHHHHHHHHHHHHHH
Confidence 467999999999877653 34589999995 544211 12577999999999999988
Q ss_pred HHHc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCC--Cc-eEE
Q 026418 78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSA--SG-RYL 151 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~y~ 151 (239)
+.+. +++++++||+.+.++........ ......+....+ ...+++++|+++++.+++..+.. .| +++
T Consensus 174 ~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~------~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~ 246 (276)
T PRK05875 174 ADELGPSWVRVNSIRPGLIRTDLVAPITES-PELSADYRACTP------LPRVGEVEDVANLAMFLLSDAASWITGQVIN 246 (276)
T ss_pred HHHhcccCeEEEEEecCccCCccccccccC-HHHHHHHHcCCC------CCCCcCHHHHHHHHHHHcCchhcCcCCCEEE
Confidence 7664 68999999999876543211110 111112221111 23367799999999999986543 24 677
Q ss_pred Ee-cCCC----CHHHHHHHHHHh
Q 026418 152 CA-ESVL----HRGEVVEILAKF 169 (239)
Q Consensus 152 ~~-~~~~----s~~el~~~i~~~ 169 (239)
+. |..+ +..|+++.+.+.
T Consensus 247 ~~~g~~~~~~~~~~~~~~~~~~~ 269 (276)
T PRK05875 247 VDGGHMLRRGPDFSSMLEPVFGA 269 (276)
T ss_pred ECCCeeccCCccHHHHHHHHhhH
Confidence 65 5554 777777766654
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.7e-07 Score=80.06 Aligned_cols=136 Identities=18% Similarity=0.045 Sum_probs=85.5
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+++|+.|+.+|+++|++.++++||++||+ +.+.. +. .+.. ......|...|..+|+.+. ..
T Consensus 181 ~~VN~~Gt~nLl~Aa~~agVgRIV~VSSi-ga~~~--g~-----p~~~-------~~sk~~~~~~KraaE~~L~----~s 241 (576)
T PLN03209 181 YRIDYLATKNLVDAATVAKVNHFILVTSL-GTNKV--GF-----PAAI-------LNLFWGVLCWKRKAEEALI----AS 241 (576)
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEEccc-hhccc--Cc-----cccc-------hhhHHHHHHHHHHHHHHHH----Hc
Confidence 46799999999999999999999999996 43211 00 0100 0124558888999998875 45
Q ss_pred CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC-CCc-eEEEe-cCC--
Q 026418 82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS-ASG-RYLCA-ESV-- 156 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~-~~~-~y~~~-~~~-- 156 (239)
|++++++|||.+.++.+..... ..+. ...+. . .....+..+|||++++.++.++. ..+ +|.+. +..
T Consensus 242 GIrvTIVRPG~L~tp~d~~~~t---~~v~-~~~~d-~----~~gr~isreDVA~vVvfLasd~~as~~kvvevi~~~~~p 312 (576)
T PLN03209 242 GLPYTIVRPGGMERPTDAYKET---HNLT-LSEED-T----LFGGQVSNLQVAELMACMAKNRRLSYCKVVEVIAETTAP 312 (576)
T ss_pred CCCEEEEECCeecCCccccccc---ccee-ecccc-c----cCCCccCHHHHHHHHHHHHcCchhccceEEEEEeCCCCC
Confidence 9999999999998874321100 0000 00000 0 01225788999999999988654 334 78554 432
Q ss_pred -CCHHHHHHH
Q 026418 157 -LHRGEVVEI 165 (239)
Q Consensus 157 -~s~~el~~~ 165 (239)
.++.++++.
T Consensus 313 ~~~~~~~~~~ 322 (576)
T PLN03209 313 LTPMEELLAK 322 (576)
T ss_pred CCCHHHHHHh
Confidence 344444443
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=98.75 E-value=3.5e-07 Score=70.97 Aligned_cols=123 Identities=20% Similarity=0.165 Sum_probs=84.2
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
++.|+.++.++++++. +.+++++|++||.++.++. .+...|+.+|...+.+++.+
T Consensus 110 ~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~---------------------~~~~~y~~sk~~~~~~~~~l 168 (246)
T PRK05653 110 IDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGN---------------------PGQTNYSAAKAGVIGFTKAL 168 (246)
T ss_pred HHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCC---------------------CCCcHhHhHHHHHHHHHHHH
Confidence 4679999999998884 4567899999996443321 23567999999999998887
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-eEE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL 151 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~ 151 (239)
+++ .+++++++||+.++|+.... ....+........ ....+++++|+++++..++.... ..| +|+
T Consensus 169 ~~~~~~~~i~~~~i~pg~~~~~~~~~----~~~~~~~~~~~~~-----~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~ 239 (246)
T PRK05653 169 ALELASRGITVNAVAPGFIDTDMTEG----LPEEVKAEILKEI-----PLGRLGQPEEVANAVAFLASDAASYITGQVIP 239 (246)
T ss_pred HHHHhhcCeEEEEEEeCCcCCcchhh----hhHHHHHHHHhcC-----CCCCCcCHHHHHHHHHHHcCchhcCccCCEEE
Confidence 654 48999999999999986421 1111111111111 12558899999999999986532 234 666
Q ss_pred Eec
Q 026418 152 CAE 154 (239)
Q Consensus 152 ~~~ 154 (239)
+.|
T Consensus 240 ~~g 242 (246)
T PRK05653 240 VNG 242 (246)
T ss_pred eCC
Confidence 654
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=3.2e-07 Score=71.25 Aligned_cols=125 Identities=21% Similarity=0.204 Sum_probs=84.0
Q ss_pred chhHhHHHHHHHHHHHhc----C-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----K-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++.++++++.+. + ..++|++||.++.++. .+...|+.+|...|.+++.
T Consensus 105 ~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------------------~~~~~y~~sK~a~~~~~~~ 163 (245)
T PRK07060 105 MAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGL---------------------PDHLAYCASKAALDAITRV 163 (245)
T ss_pred HHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCC---------------------CCCcHhHHHHHHHHHHHHH
Confidence 468999999999988653 2 3689999996333321 1246799999999999998
Q ss_pred HHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCC--Cc-eE
Q 026418 77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSA--SG-RY 150 (239)
Q Consensus 77 ~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~y 150 (239)
++.. .+++++.+||+.++++........ ......+.... ....+++++|+++++..++..+.. .| ++
T Consensus 164 ~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~-~~~~~~~~~~~------~~~~~~~~~d~a~~~~~l~~~~~~~~~G~~~ 236 (245)
T PRK07060 164 LCVELGPHGIRVNSVNPTVTLTPMAAEAWSD-PQKSGPMLAAI------PLGRFAEVDDVAAPILFLLSDAASMVSGVSL 236 (245)
T ss_pred HHHHHhhhCeEEEEEeeCCCCCchhhhhccC-HHHHHHHHhcC------CCCCCCCHHHHHHHHHHHcCcccCCccCcEE
Confidence 8765 379999999999998753221111 11111222111 124589999999999999975432 24 55
Q ss_pred EEec
Q 026418 151 LCAE 154 (239)
Q Consensus 151 ~~~~ 154 (239)
++.+
T Consensus 237 ~~~~ 240 (245)
T PRK07060 237 PVDG 240 (245)
T ss_pred eECC
Confidence 5543
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.69 E-value=3e-07 Score=72.23 Aligned_cols=126 Identities=17% Similarity=0.138 Sum_probs=80.7
Q ss_pred chhHhHHHHHHHHHHH----hcCC-CEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKV-RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v-~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++.++++++. +.+. ++++++||.++.++. .+...|+.+|...|.+++.
T Consensus 115 ~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~---------------------~~~~~y~~~K~a~~~~~~~ 173 (264)
T PRK12829 115 LAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGY---------------------PGRTPYAASKWAVVGLVKS 173 (264)
T ss_pred HHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCC---------------------CCCchhHHHHHHHHHHHHH
Confidence 5789999999998874 3344 678888885332221 1235699999999999988
Q ss_pred HHHH---cCccEEEEecCcccCCCCCCCCCh--------hHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC-
Q 026418 77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNA--------SIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP- 144 (239)
Q Consensus 77 ~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~- 144 (239)
++.. .+++++++||+.++|+........ .........+. .....+++++|+++++..++...
T Consensus 174 l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~d~a~~~~~l~~~~~ 247 (264)
T PRK12829 174 LAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEK------ISLGRMVEPEDIAATALFLASPAA 247 (264)
T ss_pred HHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhc------CCCCCCCCHHHHHHHHHHHcCccc
Confidence 8765 389999999999998753211000 00000011110 11235899999999998887542
Q ss_pred -CCCc-eEEEec
Q 026418 145 -SASG-RYLCAE 154 (239)
Q Consensus 145 -~~~~-~y~~~~ 154 (239)
...| .|++.+
T Consensus 248 ~~~~g~~~~i~~ 259 (264)
T PRK12829 248 RYITGQAISVDG 259 (264)
T ss_pred cCccCcEEEeCC
Confidence 2234 666664
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.67 E-value=2.8e-07 Score=71.96 Aligned_cols=127 Identities=13% Similarity=0.024 Sum_probs=84.5
Q ss_pred chhHhHHHHHHHHHHHhcC--CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~--v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++.++++++.+.- ..++|++||. +.+... .+...|+.+|...|.+++.+++
T Consensus 112 ~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~-~~~~~~--------------------~~~~~Y~~sK~~~~~~~~~l~~ 170 (252)
T PRK06077 112 ISTDFKSVIYCSQELAKEMREGGAIVNIASV-AGIRPA--------------------YGLSIYGAMKAAVINLTKYLAL 170 (252)
T ss_pred HhHhCHHHHHHHHHHHHHhhcCcEEEEEcch-hccCCC--------------------CCchHHHHHHHHHHHHHHHHHH
Confidence 4689999999999887641 3589999995 554211 2357899999999999999877
Q ss_pred Hc--CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCc-eEEEec
Q 026418 80 AR--GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASG-RYLCAE 154 (239)
Q Consensus 80 ~~--~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~y~~~~ 154 (239)
+. ++.+.+++|+.+.++................... . .....+++++|+|++++.++..+...| +|++.+
T Consensus 171 ~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~dva~~~~~~~~~~~~~g~~~~i~~ 243 (252)
T PRK06077 171 ELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEK-F----TLMGKILDPEEVAEFVAAILKIESITGQVFVLDS 243 (252)
T ss_pred HHhcCCEEEEEeeCCccChHHHhhhhcccccHHHHHHh-c----CcCCCCCCHHHHHHHHHHHhCccccCCCeEEecC
Confidence 65 6899999999997653211000000000011110 0 112368999999999999997655444 887763
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.67 E-value=6e-07 Score=70.27 Aligned_cols=124 Identities=21% Similarity=0.198 Sum_probs=83.6
Q ss_pred chhHhHHHHHHHHHHHhc-----C-----CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA-----K-----VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAE 71 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~-----~-----v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E 71 (239)
+++|+.++.++++++.+. + +.++|++||..+.++. .+.+.|+.+|.+.|
T Consensus 110 ~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------------------~~~~~Y~~sK~a~~ 168 (256)
T PRK12745 110 LAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVS---------------------PNRGEYCISKAGLS 168 (256)
T ss_pred HHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCC---------------------CCCcccHHHHHHHH
Confidence 578999999999888543 1 4679999996343321 12467999999999
Q ss_pred HHHHHHHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--C
Q 026418 72 KAAWEEAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--A 146 (239)
Q Consensus 72 ~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~ 146 (239)
.+++.++.+ .|++++++||+.+.++..... ..........+..+ ...+.+.+|+++++..++.... .
T Consensus 169 ~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~---~~~~~~~~~~~~~~-----~~~~~~~~d~a~~i~~l~~~~~~~~ 240 (256)
T PRK12745 169 MAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPV---TAKYDALIAKGLVP-----MPRWGEPEDVARAVAALASGDLPYS 240 (256)
T ss_pred HHHHHHHHHHHHhCCEEEEEecCCCcCcccccc---chhHHhhhhhcCCC-----cCCCcCHHHHHHHHHHHhCCccccc
Confidence 999988764 589999999999988653211 01111111121111 2357799999999998886432 2
Q ss_pred Cc-eEEEec
Q 026418 147 SG-RYLCAE 154 (239)
Q Consensus 147 ~~-~y~~~~ 154 (239)
.| .|++.+
T Consensus 241 ~G~~~~i~g 249 (256)
T PRK12745 241 TGQAIHVDG 249 (256)
T ss_pred CCCEEEECC
Confidence 34 677764
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.64 E-value=5.6e-07 Score=70.06 Aligned_cols=125 Identities=16% Similarity=0.087 Sum_probs=82.4
Q ss_pred chhHhHHHHHHHHHHHhcC-------CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK-------VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAA 74 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~-------v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~ 74 (239)
+++|+.++.++++++.+.- -.++|++||.+++++.+. ....|+.+|...+.++
T Consensus 109 ~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~--------------------~~~~Y~~sKaa~~~~~ 168 (248)
T PRK06123 109 FATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPG--------------------EYIDYAASKGAIDTMT 168 (248)
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCC--------------------CccchHHHHHHHHHHH
Confidence 5789999999998886531 136999999645553211 0235999999999999
Q ss_pred HHHHHHc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-
Q 026418 75 WEEAVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG- 148 (239)
Q Consensus 75 ~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~- 148 (239)
+.++.+. |++++++||+.++++...... ....+.......+. .-+.+++|+++++..++.... ..|
T Consensus 169 ~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~--~~~~~~~~~~~~p~------~~~~~~~d~a~~~~~l~~~~~~~~~g~ 240 (248)
T PRK06123 169 IGLAKEVAAEGIRVNAVRPGVIYTEIHASGG--EPGRVDRVKAGIPM------GRGGTAEEVARAILWLLSDEASYTTGT 240 (248)
T ss_pred HHHHHHhcccCeEEEEEecCcccCchhhccC--CHHHHHHHHhcCCC------CCCcCHHHHHHHHHHHhCccccCccCC
Confidence 8887654 899999999999998532211 11222222222221 113468999999999886542 234
Q ss_pred eEEEec
Q 026418 149 RYLCAE 154 (239)
Q Consensus 149 ~y~~~~ 154 (239)
.|++.+
T Consensus 241 ~~~~~g 246 (248)
T PRK06123 241 FIDVSG 246 (248)
T ss_pred EEeecC
Confidence 666553
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.63 E-value=9.1e-07 Score=68.83 Aligned_cols=120 Identities=21% Similarity=0.172 Sum_probs=82.2
Q ss_pred chhHhHHHHHHHHHHH-----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA-----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~-----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++.++++++. +.+.+++|++||.+++++. .+...|+.+|...+.+++.
T Consensus 115 ~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------------------~~~~~y~~sK~a~~~~~~~ 173 (249)
T PRK12827 115 IDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGN---------------------RGQVNYAASKAGLIGLTKT 173 (249)
T ss_pred HHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCC---------------------CCCchhHHHHHHHHHHHHH
Confidence 5689999999999998 4556899999996343321 1246799999999988888
Q ss_pred HHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCC--Cc-eE
Q 026418 77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSA--SG-RY 150 (239)
Q Consensus 77 ~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~y 150 (239)
++.+ .+++++++||+.+.++....... .....+..+ ...+.+.+|+++++..++..... .| .+
T Consensus 174 l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~-----~~~~~~~~~------~~~~~~~~~va~~~~~l~~~~~~~~~g~~~ 242 (249)
T PRK12827 174 LANELAPRGITVNAVAPGAINTPMADNAAP-----TEHLLNPVP------VQRLGEPDEVAALVAFLVSDAASYVTGQVI 242 (249)
T ss_pred HHHHhhhhCcEEEEEEECCcCCCcccccch-----HHHHHhhCC------CcCCcCHHHHHHHHHHHcCcccCCccCcEE
Confidence 7664 38999999999999875432211 112222111 12245789999999998865322 24 45
Q ss_pred EEe
Q 026418 151 LCA 153 (239)
Q Consensus 151 ~~~ 153 (239)
++.
T Consensus 243 ~~~ 245 (249)
T PRK12827 243 PVD 245 (249)
T ss_pred EeC
Confidence 554
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.63 E-value=3.9e-07 Score=71.41 Aligned_cols=128 Identities=17% Similarity=0.177 Sum_probs=84.6
Q ss_pred chhHhHHHHHHHHHHHhcC-----CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK-----VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~-----v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++.++++++.+.. -.++|++||....++. .+...|+.+|...+.+++.
T Consensus 108 ~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~ 166 (257)
T PRK07067 108 FAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGE---------------------ALVSHYCATKAAVISYTQS 166 (257)
T ss_pred HHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCC---------------------CCCchhhhhHHHHHHHHHH
Confidence 5789999999999986532 2479999996444321 1356799999999999988
Q ss_pred HHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHc---CCCC-cc--CCCCCCceehHHHHHHHHHhhcCCCC-
Q 026418 77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLN---GSAK-TY--ANSVQAYVHVRDVALAHILVYETPSA- 146 (239)
Q Consensus 77 ~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~---~~~~-~~--~~~~~~~i~v~D~a~~~~~~~~~~~~- 146 (239)
++.+ .|+++..++|+.++++...... ..+..... +... .+ +.....+.+.+|+|+++.+++.....
T Consensus 167 la~e~~~~gi~v~~i~pg~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~ 242 (257)
T PRK07067 167 AALALIRHGINVNAIAPGVVDTPMWDQVD----ALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMALFLASADADY 242 (257)
T ss_pred HHHHhcccCeEEEEEeeCcccchhhhhhh----hhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHHHHHHHhCccccc
Confidence 8763 5899999999999987532110 00000000 0000 01 11245699999999999998875422
Q ss_pred -Cc-eEEEec
Q 026418 147 -SG-RYLCAE 154 (239)
Q Consensus 147 -~~-~y~~~~ 154 (239)
.| +|++.|
T Consensus 243 ~~g~~~~v~g 252 (257)
T PRK07067 243 IVAQTYNVDG 252 (257)
T ss_pred ccCcEEeecC
Confidence 23 777763
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.63 E-value=7.7e-07 Score=69.43 Aligned_cols=118 Identities=17% Similarity=0.115 Sum_probs=79.2
Q ss_pred chhHhHHHHHHHHHH----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++.+++ ++.+.+++|++||.++.++. .....|+.+|...+.+++.+
T Consensus 109 ~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~l 167 (252)
T PRK06138 109 MRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGG---------------------RGRAAYVASKGAIASLTRAM 167 (252)
T ss_pred HhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCC---------------------CCccHHHHHHHHHHHHHHHH
Confidence 568999887666654 55667899999997455432 12467999999999999988
Q ss_pred HHHc---CccEEEEecCcccCCCCCCCCC--hhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC
Q 026418 78 AVAR---GVDLVVVNPVLVLGPLLQSTVN--ASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS 145 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 145 (239)
+.+. +++++.+||+.++++....... .....+.....+.. ....+++++|++++++.++..+.
T Consensus 168 ~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~d~a~~~~~l~~~~~ 235 (252)
T PRK06138 168 ALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARH-----PMNRFGTAEEVAQAALFLASDES 235 (252)
T ss_pred HHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcC-----CCCCCcCHHHHHHHHHHHcCchh
Confidence 7654 8999999999998875321100 00111111222111 11237899999999999987654
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.61 E-value=8.9e-07 Score=69.45 Aligned_cols=128 Identities=11% Similarity=0.013 Sum_probs=82.0
Q ss_pred chhHhHHHHHHHHHHHh----cC-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++.++++++.+ .+ -.++|++||.++.++. .....|+.+|.+.+.+++.
T Consensus 109 ~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~---------------------~~~~~Y~~sKaa~~~l~~~ 167 (259)
T PRK12384 109 LQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGS---------------------KHNSGYSAAKFGGVGLTQS 167 (259)
T ss_pred HHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCC---------------------CCCchhHHHHHHHHHHHHH
Confidence 57899998877777754 44 3589999996444421 1245799999999888888
Q ss_pred HHH---HcCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCC-----cc--CCCCCCceehHHHHHHHHHhhcCCCC
Q 026418 77 EAV---ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAK-----TY--ANSVQAYVHVRDVALAHILVYETPSA 146 (239)
Q Consensus 77 ~~~---~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~-----~~--~~~~~~~i~v~D~a~~~~~~~~~~~~ 146 (239)
++. ..|+++..+||+.++++..... ........ .+... .+ +.....+++.+|++++++.++.+...
T Consensus 168 la~e~~~~gi~v~~v~pg~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~l~~~~~~ 243 (259)
T PRK12384 168 LALDLAEYGITVHSLMLGNLLKSPMFQS--LLPQYAKK--LGIKPDEVEQYYIDKVPLKRGCDYQDVLNMLLFYASPKAS 243 (259)
T ss_pred HHHHHHHcCcEEEEEecCCcccchhhhh--hhHHHHHh--cCCChHHHHHHHHHhCcccCCCCHHHHHHHHHHHcCcccc
Confidence 764 4689999999999887643211 11111100 01000 01 12245689999999999988765422
Q ss_pred --Cc-eEEEec
Q 026418 147 --SG-RYLCAE 154 (239)
Q Consensus 147 --~~-~y~~~~ 154 (239)
.| +|++.+
T Consensus 244 ~~~G~~~~v~~ 254 (259)
T PRK12384 244 YCTGQSINVTG 254 (259)
T ss_pred cccCceEEEcC
Confidence 24 777764
|
|
| >PF13950 Epimerase_Csub: UDP-glucose 4-epimerase C-term subunit; PDB: 1EK5_A 1I3K_B 1I3M_B 1HZJ_A 1EK6_A 1I3N_A 1I3L_A 2CNB_B 1GY8_D 1NAI_A | Back alignment and domain information |
|---|
Probab=98.60 E-value=3e-08 Score=59.40 Aligned_cols=56 Identities=11% Similarity=0.135 Sum_probs=35.2
Q ss_pred HHHhCCCCCCCCCCCCCCCCCCCCcccChHHHHh-hCCce-eCHHHHHHHHHHHHHHcC
Q 026418 166 LAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKD-LGLEF-TPVKQCLYETVKSLQEKG 222 (239)
Q Consensus 166 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p-~~~~e~i~~~~~~~~~~g 222 (239)
+.++ .|.+++..+.+.+..+...++.|++|+++ |||+| ++|+++|+++.+|+..+.
T Consensus 2 ~e~v-tG~~i~~~~~~rR~GD~~~~~Ad~~kA~~~LgW~p~~~L~~~i~~~w~W~~~np 59 (62)
T PF13950_consen 2 FEKV-TGKKIPVEYAPRRPGDPAHLVADISKAREELGWKPKYSLEDMIRDAWNWQKKNP 59 (62)
T ss_dssp HHHH-HTS---EEEE---TT--SEE-B--HHHHHHC----SSSHHHHHHHHHHHHHHST
T ss_pred cHHH-HCCCCCceECCCCCCchhhhhCCHHHHHHHhCCCcCCCHHHHHHHHHHHHHHCc
Confidence 4556 37888888888889999999999999976 99999 999999999999998764
|
... |
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.4e-06 Score=68.15 Aligned_cols=125 Identities=16% Similarity=0.109 Sum_probs=83.7
Q ss_pred chhHhHHHHHHHHHHHhc--CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~--~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++.++++++.+. ...++|++||. ..+... .+...|+.+|.+.+.+++.++.
T Consensus 118 ~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~-~~~~~~--------------------~~~~~Y~~sK~a~~~~~~~~~~ 176 (254)
T PRK12746 118 MAVNIKAPFFLIQQTLPLLRAEGRVINISSA-EVRLGF--------------------TGSIAYGLSKGALNTMTLPLAK 176 (254)
T ss_pred HHHHhHHHHHHHHHHHHHhhcCCEEEEECCH-HhcCCC--------------------CCCcchHhhHHHHHHHHHHHHH
Confidence 568999999999998763 23589999995 655311 1246799999999999888766
Q ss_pred H---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCC--Cc-eEEEe
Q 026418 80 A---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSA--SG-RYLCA 153 (239)
Q Consensus 80 ~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~y~~~ 153 (239)
. .++++++++|+.+.++....... . ..+........ ....+.+++|+++++..++..... .| +|++.
T Consensus 177 ~~~~~~i~v~~v~pg~~~t~~~~~~~~-~-~~~~~~~~~~~-----~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~i~ 249 (254)
T PRK12746 177 HLGERGITVNTIMPGYTKTDINAKLLD-D-PEIRNFATNSS-----VFGRIGQVEDIADAVAFLASSDSRWVTGQIIDVS 249 (254)
T ss_pred HHhhcCcEEEEEEECCccCcchhhhcc-C-hhHHHHHHhcC-----CcCCCCCHHHHHHHHHHHcCcccCCcCCCEEEeC
Confidence 4 57999999999998874321100 0 11112111111 123577899999999988875422 34 77776
Q ss_pred c
Q 026418 154 E 154 (239)
Q Consensus 154 ~ 154 (239)
+
T Consensus 250 ~ 250 (254)
T PRK12746 250 G 250 (254)
T ss_pred C
Confidence 4
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.60 E-value=9.8e-07 Score=69.99 Aligned_cols=138 Identities=18% Similarity=0.144 Sum_probs=83.7
Q ss_pred chhHhHHHHHHHHHHH----hcC-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++.++++++. +.+ ..++|++||. +.+... .+...|+.+|...+.+.+.
T Consensus 111 ~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~asK~a~~~~~~~ 169 (275)
T PRK05876 111 IDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASF-AGLVPN--------------------AGLGAYGVAKYGVVGLAET 169 (275)
T ss_pred HhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCh-hhccCC--------------------CCCchHHHHHHHHHHHHHH
Confidence 5789999999998875 343 4689999996 443211 2357799999975444444
Q ss_pred HHH---HcCccEEEEecCcccCCCCCCCCChhHHHHHHH--H-cCCCCccC--CCCCCceehHHHHHHHHHhhcCCCCCc
Q 026418 77 EAV---ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKY--L-NGSAKTYA--NSVQAYVHVRDVALAHILVYETPSASG 148 (239)
Q Consensus 77 ~~~---~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~--~-~~~~~~~~--~~~~~~i~v~D~a~~~~~~~~~~~~~~ 148 (239)
++. ..|+++++++|+.+.++..... ..+... . .......+ ....++++++|+|++++.++.+..
T Consensus 170 l~~e~~~~gi~v~~v~Pg~v~t~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ai~~~~--- 241 (275)
T PRK05876 170 LAREVTADGIGVSVLCPMVVETNLVANS-----ERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILANR--- 241 (275)
T ss_pred HHHHhhhcCcEEEEEEeCccccccccch-----hhhcCccccccccccccccccccccCCCHHHHHHHHHHHHHcCC---
Confidence 433 3489999999999877642211 000000 0 01111122 234678999999999999997542
Q ss_pred eEEEecCCCCHHHHHHHHHHh
Q 026418 149 RYLCAESVLHRGEVVEILAKF 169 (239)
Q Consensus 149 ~y~~~~~~~s~~el~~~i~~~ 169 (239)
.|.+. .+....++...+.+.
T Consensus 242 ~~~~~-~~~~~~~~~~~~~~~ 261 (275)
T PRK05876 242 LYVLP-HAASRASIRRRFERI 261 (275)
T ss_pred eEEec-ChhhHHHHHHHHHHH
Confidence 44444 333444444444443
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.4e-06 Score=67.96 Aligned_cols=121 Identities=12% Similarity=0.086 Sum_probs=85.0
Q ss_pred chhHhHHHHHHHHHHHhc----CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++.+. +.+++|++||. +.|. +.+.|+.+|.+.|.+++.+
T Consensus 114 ~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~-~~~~-----------------------~~~~Y~~sK~a~~~~~~~l 169 (250)
T PRK07774 114 MSVNLDGALVCTRAVYKHMAKRGGGAIVNQSST-AAWL-----------------------YSNFYGLAKVGLNGLTQQL 169 (250)
T ss_pred HhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecc-cccC-----------------------CccccHHHHHHHHHHHHHH
Confidence 568999999999998754 34699999995 5441 2457999999999999998
Q ss_pred HHHc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-eEE
Q 026418 78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL 151 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~ 151 (239)
+++. ++++++++|+.+..+...... .......+.++.+. .-+.+++|++++++.++.... ..| +|+
T Consensus 170 ~~~~~~~~i~v~~v~pg~~~t~~~~~~~--~~~~~~~~~~~~~~------~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~ 241 (250)
T PRK07774 170 ARELGGMNIRVNAIAPGPIDTEATRTVT--PKEFVADMVKGIPL------SRMGTPEDLVGMCLFLLSDEASWITGQIFN 241 (250)
T ss_pred HHHhCccCeEEEEEecCcccCccccccC--CHHHHHHHHhcCCC------CCCcCHHHHHHHHHHHhChhhhCcCCCEEE
Confidence 7764 799999999988776533211 11233344444331 124578999999999887542 234 777
Q ss_pred Eec
Q 026418 152 CAE 154 (239)
Q Consensus 152 ~~~ 154 (239)
+.+
T Consensus 242 v~~ 244 (250)
T PRK07774 242 VDG 244 (250)
T ss_pred ECC
Confidence 763
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=98.58 E-value=2e-06 Score=66.48 Aligned_cols=123 Identities=16% Similarity=0.114 Sum_probs=82.5
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++.+ .+.+++|++||.+++|+.+ +...|+.+|...+.+++.+
T Consensus 104 ~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~---------------------~~~~y~~~k~a~~~~~~~l 162 (239)
T TIGR01830 104 IDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNA---------------------GQANYAASKAGVIGFTKSL 162 (239)
T ss_pred HHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCC---------------------CCchhHHHHHHHHHHHHHH
Confidence 56899999999999875 3456999999965555421 2456999999999888777
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eEE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYL 151 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y~ 151 (239)
+++ .|+.++++||+.+.++..... .......+....+ ..-+.+++|++++++.++... ...| +|+
T Consensus 163 ~~~~~~~g~~~~~i~pg~~~~~~~~~~---~~~~~~~~~~~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~ 233 (239)
T TIGR01830 163 AKELASRNITVNAVAPGFIDTDMTDKL---SEKVKKKILSQIP------LGRFGTPEEVANAVAFLASDEASYITGQVIH 233 (239)
T ss_pred HHHHhhcCeEEEEEEECCCCChhhhhc---ChHHHHHHHhcCC------cCCCcCHHHHHHHHHHHhCcccCCcCCCEEE
Confidence 654 489999999998866532211 1111222222211 122667999999999888543 2234 777
Q ss_pred Eec
Q 026418 152 CAE 154 (239)
Q Consensus 152 ~~~ 154 (239)
+.+
T Consensus 234 ~~~ 236 (239)
T TIGR01830 234 VDG 236 (239)
T ss_pred eCC
Confidence 764
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.58 E-value=1e-06 Score=68.68 Aligned_cols=125 Identities=15% Similarity=0.035 Sum_probs=82.3
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++.+ .+.++||++||. ..+... .+...|+.+|.+.|.+++.+
T Consensus 110 ~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~-~~~~~~--------------------~~~~~y~~sK~a~~~~~~~~ 168 (250)
T PRK08063 110 MNINAKALLFCAQEAAKLMEKVGGGKIISLSSL-GSIRYL--------------------ENYTTVGVSKAALEALTRYL 168 (250)
T ss_pred HHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcch-hhccCC--------------------CCccHHHHHHHHHHHHHHHH
Confidence 46899999999988875 345699999996 332110 13467999999999999888
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCC--Cc-eEE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSA--SG-RYL 151 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~y~ 151 (239)
+.+ .++++.+++|+.+..+..... ..............+ ...+++.+|+|++++.++..+.. .| .++
T Consensus 169 ~~~~~~~~i~v~~i~pg~v~t~~~~~~-~~~~~~~~~~~~~~~------~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~ 241 (250)
T PRK08063 169 AVELAPKGIAVNAVSGGAVDTDALKHF-PNREELLEDARAKTP------AGRMVEPEDVANAVLFLCSPEADMIRGQTII 241 (250)
T ss_pred HHHHhHhCeEEEeEecCcccCchhhhc-cCchHHHHHHhcCCC------CCCCcCHHHHHHHHHHHcCchhcCccCCEEE
Confidence 754 589999999999976542211 111111112211111 12478999999999999875432 34 556
Q ss_pred Eec
Q 026418 152 CAE 154 (239)
Q Consensus 152 ~~~ 154 (239)
+.|
T Consensus 242 ~~g 244 (250)
T PRK08063 242 VDG 244 (250)
T ss_pred ECC
Confidence 553
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.2e-06 Score=67.69 Aligned_cols=115 Identities=17% Similarity=0.120 Sum_probs=80.5
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++. +.+.+++|++||. ..+... .+...|+.+|...+.+++.+
T Consensus 110 ~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~-~~~~~~--------------------~~~~~y~~sk~a~~~~~~~~ 168 (239)
T PRK12828 110 YGVNVKTTLNASKAALPALTASGGGRIVNIGAG-AALKAG--------------------PGMGAYAAAKAGVARLTEAL 168 (239)
T ss_pred HHhhchhHHHHHHHHHHHHHhcCCCEEEEECch-HhccCC--------------------CCcchhHHHHHHHHHHHHHH
Confidence 4688999999988875 3457899999996 544321 12467999999998888777
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-eEE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL 151 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~ 151 (239)
++. .++++.++||+.++++...... .......+++++|+|+++.+++.... ..| .+.
T Consensus 169 a~~~~~~~i~~~~i~pg~v~~~~~~~~~-----------------~~~~~~~~~~~~dva~~~~~~l~~~~~~~~g~~~~ 231 (239)
T PRK12828 169 AAELLDRGITVNAVLPSIIDTPPNRADM-----------------PDADFSRWVTPEQIAAVIAFLLSDEAQAITGASIP 231 (239)
T ss_pred HHHhhhcCeEEEEEecCcccCcchhhcC-----------------CchhhhcCCCHHHHHHHHHHHhCcccccccceEEE
Confidence 654 4899999999999987321100 00111237999999999999997542 234 555
Q ss_pred Eec
Q 026418 152 CAE 154 (239)
Q Consensus 152 ~~~ 154 (239)
+.|
T Consensus 232 ~~g 234 (239)
T PRK12828 232 VDG 234 (239)
T ss_pred ecC
Confidence 543
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=3.5e-06 Score=66.13 Aligned_cols=124 Identities=15% Similarity=0.037 Sum_probs=78.6
Q ss_pred chhHhHHHHHHH----HHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVI----VAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll----~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..++ ..+++.+..++|++||. +.++. +...|+.+|.+.+.+++.+
T Consensus 113 ~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~-~~~~~----------------------~~~~Y~~sK~a~~~~~~~l 169 (260)
T PRK12823 113 IRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSI-ATRGI----------------------NRVPYSAAKGGVNALTASL 169 (260)
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCc-cccCC----------------------CCCccHHHHHHHHHHHHHH
Confidence 467777776554 44445566789999995 54421 1346999999999999998
Q ss_pred HHHc---CccEEEEecCcccCCCCCC--------C--CChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 78 AVAR---GVDLVVVNPVLVLGPLLQS--------T--VNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~~~~--------~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
+.+. |+++..++|+.++++.... . .......+.....+.+. .-+.+.+|+++++.+++...
T Consensus 170 a~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~dva~~~~~l~s~~ 243 (260)
T PRK12823 170 AFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLM------KRYGTIDEQVAAILFLASDE 243 (260)
T ss_pred HHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCc------ccCCCHHHHHHHHHHHcCcc
Confidence 7765 8999999999999873110 0 00011112222222221 22457899999999988643
Q ss_pred C--CCc-eEEEec
Q 026418 145 S--ASG-RYLCAE 154 (239)
Q Consensus 145 ~--~~~-~y~~~~ 154 (239)
. ..| ++++.+
T Consensus 244 ~~~~~g~~~~v~g 256 (260)
T PRK12823 244 ASYITGTVLPVGG 256 (260)
T ss_pred cccccCcEEeecC
Confidence 2 234 666653
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.54 E-value=1.8e-06 Score=67.63 Aligned_cols=124 Identities=13% Similarity=0.075 Sum_probs=82.7
Q ss_pred chhHhHHHHHHHHHHHhc----CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++.+. +..++|++||. ...... .....|+.+|...+.+++.+
T Consensus 115 ~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~-~~~~~~--------------------~~~~~y~~sK~a~~~~~~~~ 173 (255)
T PRK07523 115 LRTNISSVFYVGQAVARHMIARGAGKIINIASV-QSALAR--------------------PGIAPYTATKGAVGNLTKGM 173 (255)
T ss_pred HHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccc-hhccCC--------------------CCCccHHHHHHHHHHHHHHH
Confidence 568999999999988753 46789999995 322110 12567999999999999888
Q ss_pred HH---HcCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-eEE
Q 026418 78 AV---ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL 151 (239)
Q Consensus 78 ~~---~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~ 151 (239)
+. ..|+++.++||+.+.++....... .......+.+..+ ...+.+++|+|+++++++.... ..| +++
T Consensus 174 a~e~~~~gi~v~~i~pg~~~t~~~~~~~~-~~~~~~~~~~~~~------~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~ 246 (255)
T PRK07523 174 ATDWAKHGLQCNAIAPGYFDTPLNAALVA-DPEFSAWLEKRTP------AGRWGKVEELVGACVFLASDASSFVNGHVLY 246 (255)
T ss_pred HHHhhHhCeEEEEEEECcccCchhhhhcc-CHHHHHHHHhcCC------CCCCcCHHHHHHHHHHHcCchhcCccCcEEE
Confidence 76 458999999999998875321111 0111111222111 2347789999999999986532 234 555
Q ss_pred Ee
Q 026418 152 CA 153 (239)
Q Consensus 152 ~~ 153 (239)
+.
T Consensus 247 ~~ 248 (255)
T PRK07523 247 VD 248 (255)
T ss_pred EC
Confidence 55
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.53 E-value=1.6e-06 Score=68.64 Aligned_cols=130 Identities=16% Similarity=0.092 Sum_probs=79.7
Q ss_pred chhHhHH----HHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIG----TKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~----t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.+ ++.++..+++.+..++|++||. +.+... .....|+.+|...+.+.+.+
T Consensus 102 ~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~~sKaa~~~~~~~l 160 (273)
T PRK06182 102 FEVNLFGAARLTQLVLPHMRAQRSGRIINISSM-GGKIYT--------------------PLGAWYHATKFALEGFSDAL 160 (273)
T ss_pred HhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcch-hhcCCC--------------------CCccHhHHHHHHHHHHHHHH
Confidence 5678888 4555566677777899999995 321100 11356999999999987766
Q ss_pred HH---HcCccEEEEecCcccCCCCCCCC---------ChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC
Q 026418 78 AV---ARGVDLVVVNPVLVLGPLLQSTV---------NASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS 145 (239)
Q Consensus 78 ~~---~~~~~~~i~Rp~~v~G~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 145 (239)
+. ..|++++++||+.+..+...... .........+.+.. .-......+.+.+|+|++++.++....
T Consensus 161 ~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~vA~~i~~~~~~~~ 238 (273)
T PRK06182 161 RLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASM--RSTYGSGRLSDPSVIADAISKAVTARR 238 (273)
T ss_pred HHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHH--HHhhccccCCCHHHHHHHHHHHHhCCC
Confidence 53 45899999999999876421100 00000000000000 000123457799999999999998654
Q ss_pred CCceEEEec
Q 026418 146 ASGRYLCAE 154 (239)
Q Consensus 146 ~~~~y~~~~ 154 (239)
....|+++.
T Consensus 239 ~~~~~~~g~ 247 (273)
T PRK06182 239 PKTRYAVGF 247 (273)
T ss_pred CCceeecCc
Confidence 445777663
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=98.53 E-value=2.8e-06 Score=65.95 Aligned_cols=123 Identities=16% Similarity=0.142 Sum_probs=81.6
Q ss_pred chhHhHHHHHHHHHHHhc----CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++.+. +.+++|++||.+++++.. ....|+.+|...+.+++.+
T Consensus 111 ~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~---------------------~~~~y~~sk~a~~~~~~~~ 169 (248)
T PRK05557 111 IDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNP---------------------GQANYAASKAGVIGFTKSL 169 (248)
T ss_pred HHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCC---------------------CCchhHHHHHHHHHHHHHH
Confidence 467999999999888753 457899999964555321 2466999999999888776
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC--CCCCc-eEE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET--PSASG-RYL 151 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~--~~~~~-~y~ 151 (239)
+++ .+++++++||+.+.++..... ............+ ...+.+++|+++++..++.. ....| .|+
T Consensus 170 a~~~~~~~i~~~~v~pg~~~~~~~~~~---~~~~~~~~~~~~~------~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~ 240 (248)
T PRK05557 170 ARELASRGITVNAVAPGFIETDMTDAL---PEDVKEAILAQIP------LGRLGQPEEIASAVAFLASDEAAYITGQTLH 240 (248)
T ss_pred HHHhhhhCeEEEEEecCccCCcccccc---ChHHHHHHHhcCC------CCCCcCHHHHHHHHHHHcCcccCCccccEEE
Confidence 653 489999999998865432211 1122222222221 13467899999999988865 22334 666
Q ss_pred Eec
Q 026418 152 CAE 154 (239)
Q Consensus 152 ~~~ 154 (239)
+.+
T Consensus 241 i~~ 243 (248)
T PRK05557 241 VNG 243 (248)
T ss_pred ecC
Confidence 653
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.52 E-value=1.8e-06 Score=67.13 Aligned_cols=115 Identities=14% Similarity=0.059 Sum_probs=75.7
Q ss_pred chhHhHHHHHHHHHHHhcC-------CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK-------VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAA 74 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~-------v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~ 74 (239)
+++|+.++.++++++...- ..+||++||.+++++.+. ....|+.+|...+.++
T Consensus 108 ~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~--------------------~~~~Y~~sK~~~~~~~ 167 (247)
T PRK09730 108 LSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPG--------------------EYVDYAASKGAIDTLT 167 (247)
T ss_pred HhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCC--------------------cccchHhHHHHHHHHH
Confidence 5789999988887765431 246999999644443211 1235999999999888
Q ss_pred HHHHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 75 WEEAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 75 ~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
+.++.+ .+++++++||+.++++...... ....+.......+.. ...+.+|+++++.+++...
T Consensus 168 ~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~--~~~~~~~~~~~~~~~------~~~~~~dva~~~~~~~~~~ 232 (247)
T PRK09730 168 TGLSLEVAAQGIRVNCVRPGFIYTEMHASGG--EPGRVDRVKSNIPMQ------RGGQPEEVAQAIVWLLSDK 232 (247)
T ss_pred HHHHHHHHHhCeEEEEEEeCCCcCcccccCC--CHHHHHHHHhcCCCC------CCcCHHHHHHHHHhhcChh
Confidence 876644 4899999999999998643221 112223333322211 1236899999999988643
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.51 E-value=1.1e-06 Score=78.33 Aligned_cols=129 Identities=22% Similarity=0.168 Sum_probs=84.3
Q ss_pred chhHhHHHHHHHHHHH----hcCC-CEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKV-RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v-~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++.++++++. +.+. .+||++||.+++++. .....|+.+|...+.+++.
T Consensus 526 ~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~---------------------~~~~~Y~asKaa~~~l~~~ 584 (681)
T PRK08324 526 FDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPG---------------------PNFGAYGAAKAAELHLVRQ 584 (681)
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCC---------------------CCcHHHHHHHHHHHHHHHH
Confidence 5789999999977774 4443 689999996333321 1246799999999999999
Q ss_pred HHHHc---CccEEEEecCccc-CCCCCCCCChhHHHHHHHHcCCCC-----cc--CCCCCCceehHHHHHHHHHhhc--C
Q 026418 77 EAVAR---GVDLVVVNPVLVL-GPLLQSTVNASIIHILKYLNGSAK-----TY--ANSVQAYVHVRDVALAHILVYE--T 143 (239)
Q Consensus 77 ~~~~~---~~~~~i~Rp~~v~-G~~~~~~~~~~~~~~~~~~~~~~~-----~~--~~~~~~~i~v~D~a~~~~~~~~--~ 143 (239)
++.+. |+++.+++|+.+| ++....... ........+... .+ +...+.+++++|+|+++..++. .
T Consensus 585 la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~DvA~a~~~l~s~~~ 661 (681)
T PRK08324 585 LALELGPDGIRVNGVNPDAVVRGSGIWTGEW---IEARAAAYGLSEEELEEFYRARNLLKREVTPEDVAEAVVFLASGLL 661 (681)
T ss_pred HHHHhcccCeEEEEEeCceeecCCccccchh---hhhhhhhccCChHHHHHHHHhcCCcCCccCHHHHHHHHHHHhCccc
Confidence 87654 6999999999998 554211110 011111112111 11 2335679999999999999884 2
Q ss_pred CCCCc-eEEEec
Q 026418 144 PSASG-RYLCAE 154 (239)
Q Consensus 144 ~~~~~-~y~~~~ 154 (239)
....| ++++.|
T Consensus 662 ~~~tG~~i~vdg 673 (681)
T PRK08324 662 SKTTGAIITVDG 673 (681)
T ss_pred cCCcCCEEEECC
Confidence 33334 777663
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=98.50 E-value=4.4e-06 Score=65.09 Aligned_cols=126 Identities=15% Similarity=0.082 Sum_probs=82.2
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++. +.+.+++|++||. +.+.... ....|+.+|.+.+.+++.+
T Consensus 108 ~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~-~~~~~~~--------------------~~~~Y~~sK~a~~~~~~~l 166 (250)
T TIGR03206 108 IAINLTGALHMHHAVLPGMVERGAGRIVNIASD-AARVGSS--------------------GEAVYAACKGGLVAFSKTM 166 (250)
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCCeEEEEECch-hhccCCC--------------------CCchHHHHHHHHHHHHHHH
Confidence 5789999999888875 4567899999995 5443211 1356999999999888888
Q ss_pred HHHc---CccEEEEecCcccCCCCCCC---CChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCC--Cc-
Q 026418 78 AVAR---GVDLVVVNPVLVLGPLLQST---VNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSA--SG- 148 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~- 148 (239)
+++. +++++++||+.++++..... .......+..+....+ ...+...+|+|+++..++..... .|
T Consensus 167 a~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~dva~~~~~l~~~~~~~~~g~ 240 (250)
T TIGR03206 167 AREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIP------LGRLGQPDDLPGAILFFSSDDASFITGQ 240 (250)
T ss_pred HHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCC------ccCCcCHHHHHHHHHHHcCcccCCCcCc
Confidence 7653 89999999999988742110 0001111222222221 12255679999999998865422 34
Q ss_pred eEEEec
Q 026418 149 RYLCAE 154 (239)
Q Consensus 149 ~y~~~~ 154 (239)
++.+.+
T Consensus 241 ~~~~~~ 246 (250)
T TIGR03206 241 VLSVSG 246 (250)
T ss_pred EEEeCC
Confidence 665553
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.47 E-value=1.7e-06 Score=68.29 Aligned_cols=131 Identities=15% Similarity=0.105 Sum_probs=80.9
Q ss_pred chhHhHHHHHHHHHH----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++ ++.+..++|++||. ..+... .....|+.+|...+.+++.+
T Consensus 101 ~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~-~~~~~~--------------------~~~~~Y~~sK~a~~~~~~~l 159 (270)
T PRK06179 101 FDTNVFGILRMTRAVLPHMRAQGSGRIINISSV-LGFLPA--------------------PYMALYAASKHAVEGYSESL 159 (270)
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCCceEEEECCc-cccCCC--------------------CCccHHHHHHHHHHHHHHHH
Confidence 578999999988885 55678899999996 333111 12467999999999988877
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCCh--hHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCceEEE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNA--SIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLC 152 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~ 152 (239)
+.+ .|+++++++|+.+.++........ ..........................+|+|+.++.++..+....+|..
T Consensus 160 ~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~~~~~~~~~~ 239 (270)
T PRK06179 160 DHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKADAPEVVADTVVKAALGPWPKMRYTA 239 (270)
T ss_pred HHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhccccCCCHHHHHHHHHHHHcCCCCCeeEec
Confidence 543 599999999999987643221100 000000000000000000112245678999999999976554446655
Q ss_pred e
Q 026418 153 A 153 (239)
Q Consensus 153 ~ 153 (239)
+
T Consensus 240 ~ 240 (270)
T PRK06179 240 G 240 (270)
T ss_pred C
Confidence 3
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.43 E-value=1e-05 Score=65.04 Aligned_cols=125 Identities=19% Similarity=0.119 Sum_probs=84.6
Q ss_pred chhHhHHHHHHHHHHHhc--CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~--~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++.++++++.+. .-.++|++||. ..|.... ....|+.+|.+.+.+++.++.
T Consensus 163 ~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~-~~~~~~~--------------------~~~~Y~asK~a~~~~~~~la~ 221 (300)
T PRK06128 163 FKTNVYAMFWLCKAAIPHLPPGASIINTGSI-QSYQPSP--------------------TLLDYASTKAAIVAFTKALAK 221 (300)
T ss_pred HHHHhHHHHHHHHHHHHhcCcCCEEEEECCc-cccCCCC--------------------CchhHHHHHHHHHHHHHHHHH
Confidence 678999999999999763 12589999996 5553211 235699999999999998876
Q ss_pred H---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCC--Cc-eEEEe
Q 026418 80 A---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSA--SG-RYLCA 153 (239)
Q Consensus 80 ~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~y~~~ 153 (239)
+ .|+++..++|+.+.++..... ......+..+....+ ...+.+.+|++.++++++..... .| ++++.
T Consensus 222 el~~~gI~v~~v~PG~i~t~~~~~~-~~~~~~~~~~~~~~p------~~r~~~p~dva~~~~~l~s~~~~~~~G~~~~v~ 294 (300)
T PRK06128 222 QVAEKGIRVNAVAPGPVWTPLQPSG-GQPPEKIPDFGSETP------MKRPGQPVEMAPLYVLLASQESSYVTGEVFGVT 294 (300)
T ss_pred HhhhcCcEEEEEEECcCcCCCcccC-CCCHHHHHHHhcCCC------CCCCcCHHHHHHHHHHHhCccccCccCcEEeeC
Confidence 5 489999999999998753221 111122222222211 23467899999999998864322 24 66665
Q ss_pred c
Q 026418 154 E 154 (239)
Q Consensus 154 ~ 154 (239)
|
T Consensus 295 g 295 (300)
T PRK06128 295 G 295 (300)
T ss_pred C
Confidence 3
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.42 E-value=5.5e-06 Score=65.74 Aligned_cols=141 Identities=14% Similarity=0.192 Sum_probs=84.9
Q ss_pred chhHhHH----HHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIG----TKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~----t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.| +++++..+++.+..++|++||. ..+... .+...|+.+|...|.+++.+
T Consensus 104 ~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~asK~a~~~~~~~l 162 (277)
T PRK05993 104 FEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSI-LGLVPM--------------------KYRGAYNASKFAIEGLSLTL 162 (277)
T ss_pred HhHHhHHHHHHHHHHHHHHhhcCCCEEEEECCh-hhcCCC--------------------CccchHHHHHHHHHHHHHHH
Confidence 5789888 6777788888877899999995 332110 13567999999999998877
Q ss_pred HH---HcCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCc--------------cCCCCCCceehHHHHHHHHHh
Q 026418 78 AV---ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKT--------------YANSVQAYVHVRDVALAHILV 140 (239)
Q Consensus 78 ~~---~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~i~v~D~a~~~~~~ 140 (239)
+. ..|+++++++||.+-.+..... ...+.......... ........+..+++|+.++.+
T Consensus 163 ~~el~~~gi~v~~v~Pg~v~T~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~i~~a 238 (277)
T PRK05993 163 RMELQGSGIHVSLIEPGPIETRFRANA----LAAFKRWIDIENSVHRAAYQQQMARLEGGGSKSRFKLGPEAVYAVLLHA 238 (277)
T ss_pred HHHhhhhCCEEEEEecCCccCchhhHH----HHHHhhhhccccchhHHHHHHHHHHHHhhhhccccCCCHHHHHHHHHHH
Confidence 53 4589999999998865432110 00000100000000 000111245789999999999
Q ss_pred hcCCCCCceEEEecCCCCHHHHHHHHHHhCC
Q 026418 141 YETPSASGRYLCAESVLHRGEVVEILAKFFP 171 (239)
Q Consensus 141 ~~~~~~~~~y~~~~~~~s~~el~~~i~~~~~ 171 (239)
+........|..+.. ..+...+.+.+|
T Consensus 239 ~~~~~~~~~~~~~~~----~~~~~~~~~~~p 265 (277)
T PRK05993 239 LTAPRPRPHYRVTTP----AKQGALLKRLLP 265 (277)
T ss_pred HcCCCCCCeeeeCch----hHHHHHHHHHCC
Confidence 986654435544321 234444555544
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.42 E-value=3.8e-06 Score=65.41 Aligned_cols=115 Identities=19% Similarity=0.113 Sum_probs=77.3
Q ss_pred chhHhHHHHHHHHHHHhc--CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~--~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++.++++++.+. ...++|++||.++.|+.+ ....|+.+|...|.+++.++.
T Consensus 108 ~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~---------------------~~~~Y~~sK~a~~~~~~~la~ 166 (249)
T PRK06500 108 FNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMP---------------------NSSVYAASKAALLSLAKTLSG 166 (249)
T ss_pred HHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCC---------------------CccHHHHHHHHHHHHHHHHHH
Confidence 578999999999999752 235688888855555321 246799999999999988765
Q ss_pred H---cCccEEEEecCcccCCCCCCC---CChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 80 A---RGVDLVVVNPVLVLGPLLQST---VNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 80 ~---~~~~~~i~Rp~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
+ .|+++.++||+.++++..... ..........+..+.+. .-+...+|+++++.+++..
T Consensus 167 e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~va~~~~~l~~~ 230 (249)
T PRK06500 167 ELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPL------GRFGTPEEIAKAVLYLASD 230 (249)
T ss_pred HhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCC------CCCcCHHHHHHHHHHHcCc
Confidence 4 389999999999998742110 00011122223322221 1245789999999998864
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.41 E-value=5.8e-06 Score=64.67 Aligned_cols=115 Identities=14% Similarity=0.126 Sum_probs=74.8
Q ss_pred chhHhHHHHHH----HHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNV----IVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~l----l~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.|+.++ ++++++.+.+++|++||..+..+ . .....|+.+|...|.+.+.+
T Consensus 102 ~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~-~--------------------~~~~~Y~~sK~~~~~~~~~l 160 (256)
T PRK08017 102 FSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLIS-T--------------------PGRGAYAASKYALEAWSDAL 160 (256)
T ss_pred HHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccC-C--------------------CCccHHHHHHHHHHHHHHHH
Confidence 56788887775 67777777789999999522211 0 12467999999999887654
Q ss_pred H---HHcCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCcc--CCCCCCceehHHHHHHHHHhhcCCCC
Q 026418 78 A---VARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY--ANSVQAYVHVRDVALAHILVYETPSA 146 (239)
Q Consensus 78 ~---~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~D~a~~~~~~~~~~~~ 146 (239)
+ ...+++++++||+.+..+.... +... ....+.. +...+.+++++|+++++..++.....
T Consensus 161 ~~~~~~~~i~v~~v~pg~~~t~~~~~--------~~~~-~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~ 225 (256)
T PRK08017 161 RMELRHSGIKVSLIEPGPIRTRFTDN--------VNQT-QSDKPVENPGIAARFTLGPEAVVPKLRHALESPKP 225 (256)
T ss_pred HHHHhhcCCEEEEEeCCCcccchhhc--------ccch-hhccchhhhHHHhhcCCCHHHHHHHHHHHHhCCCC
Confidence 3 3458999999998775432110 0000 0011111 12235689999999999999976654
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.40 E-value=5.7e-07 Score=71.69 Aligned_cols=122 Identities=14% Similarity=0.069 Sum_probs=73.5
Q ss_pred chhHhHHHHHHHHHH----HhcCC------CEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKV------RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAE 71 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v------~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E 71 (239)
+++|+.++.++++++ .+.+. .++|++||. +.+... .+...|+.+|...+
T Consensus 111 ~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~-~~~~~~--------------------~~~~~Y~~sK~a~~ 169 (287)
T PRK06194 111 LGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASM-AGLLAP--------------------PAMGIYNVSKHAVV 169 (287)
T ss_pred HhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCCh-hhccCC--------------------CCCcchHHHHHHHH
Confidence 578999999977773 44432 589999996 444211 12467999999999
Q ss_pred HHHHHHHHHcC-----ccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCc-cC--CCCCCceehHHHHHHHHHhhcC
Q 026418 72 KAAWEEAVARG-----VDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKT-YA--NSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 72 ~~~~~~~~~~~-----~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
.+++.++.+.+ +++..+.|+.+..+ +.....+++.. ++ ...++|++++|++..+....
T Consensus 170 ~~~~~l~~e~~~~~~~irv~~v~pg~i~t~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 235 (287)
T PRK06194 170 SLTETLYQDLSLVTDQVGASVLCPYFVPTG------------IWQSERNRPADLANTAPPTRSQLIAQAMSQKAVGSG-- 235 (287)
T ss_pred HHHHHHHHHHhhcCCCeEEEEEEeCcccCc------------cccccccCchhcccCccccchhhHHHHHHHhhhhcc--
Confidence 99998877644 45556666555322 11122222222 22 34566777777666543221
Q ss_pred CCCCceEEEecCCCCHHHHHHHHHHhC
Q 026418 144 PSASGRYLCAESVLHRGEVVEILAKFF 170 (239)
Q Consensus 144 ~~~~~~y~~~~~~~s~~el~~~i~~~~ 170 (239)
.++..|+++.+.+.+
T Consensus 236 ------------~~s~~dva~~i~~~~ 250 (287)
T PRK06194 236 ------------KVTAEEVAQLVFDAI 250 (287)
T ss_pred ------------CCCHHHHHHHHHHHH
Confidence 156667776666654
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.40 E-value=7.4e-06 Score=64.28 Aligned_cols=117 Identities=14% Similarity=0.060 Sum_probs=78.3
Q ss_pred chhHhHHHHHHHHHHHhc-----CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA-----KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~-----~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++.++++++.+. +..+||++||.+.+++.... ..+...|+.+|...|.+++.
T Consensus 117 ~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~-----------------~~~~~~Y~~sKa~~~~~~~~ 179 (259)
T PRK08213 117 MNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPE-----------------VMDTIAYNTSKGAVINFTRA 179 (259)
T ss_pred HhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCcc-----------------ccCcchHHHHHHHHHHHHHH
Confidence 568999999999988654 56799999996344432211 02357799999999999999
Q ss_pred HHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 77 ~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
++++ .|+++.+++|+.+-.+.... ........+..+.+. .-+...+|++.++.+++...
T Consensus 180 ~a~~~~~~gi~v~~v~Pg~~~t~~~~~---~~~~~~~~~~~~~~~------~~~~~~~~va~~~~~l~~~~ 241 (259)
T PRK08213 180 LAAEWGPHGIRVNAIAPGFFPTKMTRG---TLERLGEDLLAHTPL------GRLGDDEDLKGAALLLASDA 241 (259)
T ss_pred HHHHhcccCEEEEEEecCcCCCcchhh---hhHHHHHHHHhcCCC------CCCcCHHHHHHHHHHHhCcc
Confidence 8775 37899999999886553211 111222333333221 22445899999988887543
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.40 E-value=6.2e-06 Score=64.33 Aligned_cols=116 Identities=16% Similarity=0.050 Sum_probs=78.0
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++.. .+..++|++||. ..... ..+...|+.+|...+.+++.+
T Consensus 104 ~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~-~~~~~--------------------~~~~~~Y~~sK~a~~~~~~~l 162 (252)
T PRK08220 104 FAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSN-AAHVP--------------------RIGMAAYGASKAALTSLAKCV 162 (252)
T ss_pred HHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCc-hhccC--------------------CCCCchhHHHHHHHHHHHHHH
Confidence 57899999999988753 345689999995 32210 013567999999999999888
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChh---HH----HHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNAS---II----HILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~---~~----~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
+.+ .++++.+++|+.++++......... .. .......+ .....+++++|+|++++.++...
T Consensus 163 a~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~dva~~~~~l~~~~ 233 (252)
T PRK08220 163 GLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLG------IPLGKIARPQEIANAVLFLASDL 233 (252)
T ss_pred HHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhc------CCCcccCCHHHHHHHHHHHhcch
Confidence 765 6899999999999987532110000 00 00111111 12345899999999999988643
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.39 E-value=9.7e-06 Score=63.15 Aligned_cols=116 Identities=18% Similarity=0.107 Sum_probs=75.8
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++. +.+.++||++||. ..+... .+...|+.+|...+.+++.+
T Consensus 110 ~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~-~~~~~~--------------------~~~~~y~~sk~~~~~~~~~~ 168 (251)
T PRK07231 110 FAVNVKSPYLWTQAAVPAMRGEGGGAIVNVAST-AGLRPR--------------------PGLGWYNASKGAVITLTKAL 168 (251)
T ss_pred HhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCh-hhcCCC--------------------CCchHHHHHHHHHHHHHHHH
Confidence 4678888777776665 4567899999996 443211 13567999999999988888
Q ss_pred HHHc---CccEEEEecCcccCCCCCCCCCh-hHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 78 AVAR---GVDLVVVNPVLVLGPLLQSTVNA-SIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
+.+. +++++.++|+.+.++........ .......+..+. ....+++++|+|++++.++...
T Consensus 169 a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~dva~~~~~l~~~~ 233 (251)
T PRK07231 169 AAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATI------PLGRLGTPEDIANAALFLASDE 233 (251)
T ss_pred HHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCC------CCCCCcCHHHHHHHHHHHhCcc
Confidence 7653 88999999999966532211000 001111121211 1245789999999999998654
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.37 E-value=5.4e-06 Score=64.97 Aligned_cols=132 Identities=17% Similarity=0.149 Sum_probs=83.5
Q ss_pred chhHhHHHHHHHHHHHh---cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE---AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA 78 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~---~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~ 78 (239)
+++|+.++.++++++.+ .+..++|++||..++++. .+...|+.+|...+.+++.++
T Consensus 110 ~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~l~ 168 (258)
T PRK08628 110 LERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQ---------------------GGTSGYAAAKGAQLALTREWA 168 (258)
T ss_pred HhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCC---------------------CCCchhHHHHHHHHHHHHHHH
Confidence 56899999998888753 234689999996444321 124679999999999999886
Q ss_pred HH---cCccEEEEecCcccCCCCCCCC---ChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-e
Q 026418 79 VA---RGVDLVVVNPVLVLGPLLQSTV---NASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-R 149 (239)
Q Consensus 79 ~~---~~~~~~i~Rp~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~ 149 (239)
.. .++++..++|+.++++...... .........+....+ + ...++..+|+|+++++++... ...| .
T Consensus 169 ~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~dva~~~~~l~~~~~~~~~g~~ 243 (258)
T PRK08628 169 VALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIP--L---GHRMTTAEEIADTAVFLLSERSSHTTGQW 243 (258)
T ss_pred HHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCC--c---cccCCCHHHHHHHHHHHhChhhccccCce
Confidence 53 4899999999999987421100 000011111111111 1 124678899999999998754 2334 5
Q ss_pred EEEecCCCCH
Q 026418 150 YLCAESVLHR 159 (239)
Q Consensus 150 y~~~~~~~s~ 159 (239)
+.+.|.-...
T Consensus 244 ~~~~gg~~~~ 253 (258)
T PRK08628 244 LFVDGGYVHL 253 (258)
T ss_pred EEecCCcccc
Confidence 5554443333
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.35 E-value=1.5e-05 Score=61.12 Aligned_cols=117 Identities=20% Similarity=0.145 Sum_probs=75.5
Q ss_pred chhHhHH----HHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIG----TKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~----t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.+ ++++++++++.+ .++|++||. ..+... .+...|+.+|...+.+++.+
T Consensus 99 ~~~n~~~~~~~~~~~~~~~~~~~-~~~v~~ss~-~~~~~~--------------------~~~~~y~~~K~a~~~~~~~~ 156 (227)
T PRK08219 99 LEVNVVAPAELTRLLLPALRAAH-GHVVFINSG-AGLRAN--------------------PGWGSYAASKFALRALADAL 156 (227)
T ss_pred HHHHhHHHHHHHHHHHHHHHhCC-CeEEEEcch-HhcCcC--------------------CCCchHHHHHHHHHHHHHHH
Confidence 4567777 556666666554 689999995 444211 12467999999999988877
Q ss_pred HHH-cC-ccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCceEEEe
Q 026418 78 AVA-RG-VDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCA 153 (239)
Q Consensus 78 ~~~-~~-~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~ 153 (239)
+.. .+ +++..++|+.+.++... ....+....+ ....+++++|++++++++++++..+.+|++.
T Consensus 157 ~~~~~~~i~~~~i~pg~~~~~~~~-----------~~~~~~~~~~--~~~~~~~~~dva~~~~~~l~~~~~~~~~~~~ 221 (227)
T PRK08219 157 REEEPGNVRVTSVHPGRTDTDMQR-----------GLVAQEGGEY--DPERYLRPETVAKAVRFAVDAPPDAHITEVV 221 (227)
T ss_pred HHHhcCCceEEEEecCCccchHhh-----------hhhhhhcccc--CCCCCCCHHHHHHHHHHHHcCCCCCccceEE
Confidence 554 24 78888998876544211 1111110011 1246899999999999999876544477665
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.33 E-value=2.1e-05 Score=60.63 Aligned_cols=115 Identities=17% Similarity=0.106 Sum_probs=74.8
Q ss_pred chhHhHHHHHHHHHH----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++.+++ ++.+..++|++||. +.|+.. ....|+.+|...+.+++.+
T Consensus 96 ~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~-~~~~~~---------------------~~~~Y~~sK~a~~~~~~~~ 153 (234)
T PRK07577 96 YDLNVRAAVQVTQAFLEGMKLREQGRIVNICSR-AIFGAL---------------------DRTSYSAAKSALVGCTRTW 153 (234)
T ss_pred HHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccc-cccCCC---------------------CchHHHHHHHHHHHHHHHH
Confidence 467888877776655 45567899999995 655321 1467999999999888876
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
+.+ .|++++++||+.+..+...............+....+ ...+...+|+|.+++.++..+
T Consensus 154 a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~a~~~~~l~~~~ 217 (234)
T PRK07577 154 ALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIP------MRRLGTPEEVAAAIAFLLSDD 217 (234)
T ss_pred HHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCC------CCCCcCHHHHHHHHHHHhCcc
Confidence 543 4899999999999876422111100111122222211 122457899999999998754
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.32 E-value=3.9e-06 Score=65.74 Aligned_cols=115 Identities=18% Similarity=0.161 Sum_probs=77.3
Q ss_pred chhHhHHHHHHHHHHHhc---CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA---KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA 78 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~---~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~ 78 (239)
+++|+.++..+++++.+. ...++|++||. ..+... .+...|+.+|...+.+++.++
T Consensus 111 ~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~-~~~~~~--------------------~~~~~Y~~sK~a~~~l~~~~a 169 (258)
T PRK07890 111 IELNVLGTLRLTQAFTPALAESGGSIVMINSM-VLRHSQ--------------------PKYGAYKMAKGALLAASQSLA 169 (258)
T ss_pred HHhhhHHHHHHHHHHHHHHHhCCCEEEEEech-hhccCC--------------------CCcchhHHHHHHHHHHHHHHH
Confidence 578999999999999753 12589999995 332110 124679999999999999887
Q ss_pred HH---cCccEEEEecCcccCCCCCCCCC--------hhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 79 VA---RGVDLVVVNPVLVLGPLLQSTVN--------ASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 79 ~~---~~~~~~i~Rp~~v~G~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
.. .++++..+||+.++++....... ..........+.. ....+.+++|+++++++++..
T Consensus 170 ~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~dva~a~~~l~~~ 239 (258)
T PRK07890 170 TELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANS------DLKRLPTDDEVASAVLFLASD 239 (258)
T ss_pred HHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcC------CccccCCHHHHHHHHHHHcCH
Confidence 64 38999999999999975321000 0001111111111 123477899999999998874
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.32 E-value=2.2e-05 Score=61.56 Aligned_cols=126 Identities=17% Similarity=0.027 Sum_probs=82.7
Q ss_pred chhHhHHHHHHHHHHHhcC----CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK----VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~----v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++.+.. -.++|++||. ..+... .....|+.+|...|.+.+.+
T Consensus 115 ~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~-~~~~~~--------------------p~~~~Y~~sK~a~~~~~~~l 173 (258)
T PRK09134 115 MATNLRAPFVLAQAFARALPADARGLVVNMIDQ-RVWNLN--------------------PDFLSYTLSKAALWTATRTL 173 (258)
T ss_pred HHHhhHHHHHHHHHHHHHHHhcCCceEEEECch-hhcCCC--------------------CCchHHHHHHHHHHHHHHHH
Confidence 5789999999999887632 3578888873 433211 01346999999999999998
Q ss_pred HHHc--CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCc-eEEEe-
Q 026418 78 AVAR--GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASG-RYLCA- 153 (239)
Q Consensus 78 ~~~~--~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~y~~~- 153 (239)
++.. ++.+..++|+.+...... ....+.....+.+ . ....+++|+|++++.++..+...| .|++.
T Consensus 174 a~~~~~~i~v~~i~PG~v~t~~~~-----~~~~~~~~~~~~~--~----~~~~~~~d~a~~~~~~~~~~~~~g~~~~i~g 242 (258)
T PRK09134 174 AQALAPRIRVNAIGPGPTLPSGRQ-----SPEDFARQHAATP--L----GRGSTPEEIAAAVRYLLDAPSVTGQMIAVDG 242 (258)
T ss_pred HHHhcCCcEEEEeecccccCCccc-----ChHHHHHHHhcCC--C----CCCcCHHHHHHHHHHHhcCCCcCCCEEEECC
Confidence 7654 488999999988654311 0112222222221 1 124779999999999998765556 66655
Q ss_pred cCCCCH
Q 026418 154 ESVLHR 159 (239)
Q Consensus 154 ~~~~s~ 159 (239)
|..+++
T Consensus 243 g~~~~~ 248 (258)
T PRK09134 243 GQHLAW 248 (258)
T ss_pred Ceeccc
Confidence 444443
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=98.32 E-value=1.6e-05 Score=62.23 Aligned_cols=119 Identities=13% Similarity=-0.037 Sum_probs=74.6
Q ss_pred chhHhHHHHHHHHH----HHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVA----AAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a----~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..++++ +++.+..++|++||.++.++. .. ...++.+ ......|+.+|...+.+.+.+
T Consensus 114 ~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-~~----~~~~~~~------~~~~~~Y~~sK~a~~~l~~~l 182 (256)
T PRK09186 114 LSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAP-KF----EIYEGTS------MTSPVEYAAIKAGIIHLTKYL 182 (256)
T ss_pred HHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccc-cc----hhccccc------cCCcchhHHHHHHHHHHHHHH
Confidence 35677666655544 455567799999996444422 11 1222222 112346999999999998877
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
++. .++++++++|+.++++.. ... ....+...+ ...+++.+|+|++++.++...
T Consensus 183 a~e~~~~~i~v~~i~Pg~~~~~~~-------~~~-~~~~~~~~~-----~~~~~~~~dva~~~~~l~~~~ 239 (256)
T PRK09186 183 AKYFKDSNIRVNCVSPGGILDNQP-------EAF-LNAYKKCCN-----GKGMLDPDDICGTLVFLLSDQ 239 (256)
T ss_pred HHHhCcCCeEEEEEecccccCCCC-------HHH-HHHHHhcCC-----ccCCCCHHHhhhhHhheeccc
Confidence 664 479999999998875421 111 121221111 134789999999999999754
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.29 E-value=1.5e-05 Score=61.25 Aligned_cols=126 Identities=21% Similarity=0.103 Sum_probs=81.7
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+++|+.++.+++++....+..++|++||. +.+... .+...|+.+|...+.+.+.++.+.
T Consensus 97 ~~~n~~~~~~l~~~~~~~~~g~iv~~ss~-~~~~~~--------------------~~~~~Y~~sK~a~~~~~~~la~e~ 155 (230)
T PRK07041 97 MDSKFWGAYRVARAARIAPGGSLTFVSGF-AAVRPS--------------------ASGVLQGAINAALEALARGLALEL 155 (230)
T ss_pred HHHHHHHHHHHHhhhhhcCCeEEEEECch-hhcCCC--------------------CcchHHHHHHHHHHHHHHHHHHHh
Confidence 57899999999997666557899999996 544211 135679999999999999887653
Q ss_pred -CccEEEEecCcccCCCCCCCCC-hhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCc-eEEEec
Q 026418 82 -GVDLVVVNPVLVLGPLLQSTVN-ASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASG-RYLCAE 154 (239)
Q Consensus 82 -~~~~~i~Rp~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~y~~~~ 154 (239)
++++..++|+.+-.+....... .....+.......+ ...+...+|+|+++..++......| +|++.|
T Consensus 156 ~~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~dva~~~~~l~~~~~~~G~~~~v~g 225 (230)
T PRK07041 156 APVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLP------ARRVGQPEDVANAILFLAANGFTTGSTVLVDG 225 (230)
T ss_pred hCceEEEEeecccccHHHHhhhccchHHHHHHHHhcCC------CCCCcCHHHHHHHHHHHhcCCCcCCcEEEeCC
Confidence 5788899998875543211000 00111122222111 1124568999999999997654444 776653
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.29 E-value=1.5e-05 Score=62.17 Aligned_cols=122 Identities=14% Similarity=0.058 Sum_probs=81.2
Q ss_pred chhHhHHHHHHHHHHHh----c-CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----A-KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~-~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++..+.+++.. . .-.++|++||. +.|+.. +...|+.+|.+.+.+++.
T Consensus 119 ~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~-~~~~~~---------------------~~~~Y~~sK~a~~~l~~~ 176 (253)
T PRK08217 119 IDVNLTGVFLCGREAAAKMIESGSKGVIINISSI-ARAGNM---------------------GQTNYSASKAGVAAMTVT 176 (253)
T ss_pred HhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccc-cccCCC---------------------CCchhHHHHHHHHHHHHH
Confidence 46788888877665432 2 22469999994 655321 246799999999999888
Q ss_pred HHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCc-eEEE
Q 026418 77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASG-RYLC 152 (239)
Q Consensus 77 ~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~y~~ 152 (239)
++++ .+++++.++|+.+.++..... .......+..+.+ ...+.+.+|+++++..++......| ++++
T Consensus 177 la~~~~~~~i~v~~v~pg~v~t~~~~~~---~~~~~~~~~~~~~------~~~~~~~~~~a~~~~~l~~~~~~~g~~~~~ 247 (253)
T PRK08217 177 WAKELARYGIRVAAIAPGVIETEMTAAM---KPEALERLEKMIP------VGRLGEPEEIAHTVRFIIENDYVTGRVLEI 247 (253)
T ss_pred HHHHHHHcCcEEEEEeeCCCcCcccccc---CHHHHHHHHhcCC------cCCCcCHHHHHHHHHHHHcCCCcCCcEEEe
Confidence 8754 589999999999987653211 1122223322222 1346789999999999887544345 6766
Q ss_pred ec
Q 026418 153 AE 154 (239)
Q Consensus 153 ~~ 154 (239)
.|
T Consensus 248 ~g 249 (253)
T PRK08217 248 DG 249 (253)
T ss_pred CC
Confidence 54
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.28 E-value=1.3e-05 Score=62.97 Aligned_cols=112 Identities=18% Similarity=0.120 Sum_probs=76.8
Q ss_pred chhHhHHHHHHHHHHHh---cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE---AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA 78 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~---~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~ 78 (239)
+++|+.++.++++++.. .+..++|++||. ..+... .+...|+.+|...+.+.+.++
T Consensus 107 ~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~-~~~~~~--------------------~~~~~Y~~sK~~~~~~~~~l~ 165 (263)
T PRK06181 107 MRVNYLGAVYCTHAALPHLKASRGQIVVVSSL-AGLTGV--------------------PTRSGYAASKHALHGFFDSLR 165 (263)
T ss_pred HHHhhHHHHHHHHHHHHHHHhcCCEEEEEecc-cccCCC--------------------CCccHHHHHHHHHHHHHHHHH
Confidence 57899999999999853 234689999995 444211 124679999999999988775
Q ss_pred HH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCc-cCCCCCCceehHHHHHHHHHhhcC
Q 026418 79 VA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKT-YANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 79 ~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
.. .++++..++|+.+..+..... +. ..+.... .+....++++++|+|++++.++..
T Consensus 166 ~~~~~~~i~~~~i~pg~v~t~~~~~~-------~~--~~~~~~~~~~~~~~~~~~~~dva~~i~~~~~~ 225 (263)
T PRK06181 166 IELADDGVAVTVVCPGFVATDIRKRA-------LD--GDGKPLGKSPMQESKIMSAEECAEAILPAIAR 225 (263)
T ss_pred HHhhhcCceEEEEecCccccCcchhh-------cc--ccccccccccccccCCCCHHHHHHHHHHHhhC
Confidence 43 489999999999876532110 00 0111111 122234789999999999999974
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.28 E-value=2.4e-05 Score=62.53 Aligned_cols=124 Identities=17% Similarity=0.143 Sum_probs=84.0
Q ss_pred chhHhHHHHHHHHHHHhc--CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~--~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++.++++++.+. .-.++|++||. +.|.... ....|+.+|.+.+.+++.++.
T Consensus 153 ~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~-~~~~~~~--------------------~~~~Y~~sK~a~~~l~~~la~ 211 (290)
T PRK06701 153 FKTNIYSYFHMTKAALPHLKQGSAIINTGSI-TGYEGNE--------------------TLIDYSATKGAIHAFTRSLAQ 211 (290)
T ss_pred HhhhhHHHHHHHHHHHHHHhhCCeEEEEecc-cccCCCC--------------------CcchhHHHHHHHHHHHHHHHH
Confidence 578999999999999763 23589999995 5542211 134699999999999999887
Q ss_pred Hc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-eEEEe
Q 026418 80 AR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYLCA 153 (239)
Q Consensus 80 ~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~ 153 (239)
.. |+++..++|+.++.+...... ....+..+... .....+.+++|+|+++++++.... ..| ++++.
T Consensus 212 ~~~~~gIrv~~i~pG~v~T~~~~~~~--~~~~~~~~~~~------~~~~~~~~~~dva~~~~~ll~~~~~~~~G~~i~id 283 (290)
T PRK06701 212 SLVQKGIRVNAVAPGPIWTPLIPSDF--DEEKVSQFGSN------TPMQRPGQPEELAPAYVFLASPDSSYITGQMLHVN 283 (290)
T ss_pred HhhhcCeEEEEEecCCCCCccccccc--CHHHHHHHHhc------CCcCCCcCHHHHHHHHHHHcCcccCCccCcEEEeC
Confidence 64 899999999999876432211 11122222211 112457899999999999887542 234 55555
Q ss_pred c
Q 026418 154 E 154 (239)
Q Consensus 154 ~ 154 (239)
+
T Consensus 284 g 284 (290)
T PRK06701 284 G 284 (290)
T ss_pred C
Confidence 3
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.27 E-value=1.7e-05 Score=62.70 Aligned_cols=115 Identities=17% Similarity=0.075 Sum_probs=73.6
Q ss_pred chhHhHHHHHHHHH----HHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVA----AAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a----~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++.++ +++.+..++|++||. ..+... .....|+.+|...+.+.+.+
T Consensus 105 ~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~-~~~~~~--------------------~~~~~Y~~sKaa~~~~~~~l 163 (270)
T PRK05650 105 IAINLMGVVKGCKAFLPLFKRQKSGRIVNIASM-AGLMQG--------------------PAMSSYNVAKAGVVALSETL 163 (270)
T ss_pred HHHccHHHHHHHHHHHHHHHhCCCCEEEEECCh-hhcCCC--------------------CCchHHHHHHHHHHHHHHHH
Confidence 46787777776655 456667899999996 433211 12467999999988777777
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
+.+ .|+++++++|+.+..+........... ........ ....+++++|+|+.++.++.+.
T Consensus 164 ~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~~~vA~~i~~~l~~~ 226 (270)
T PRK05650 164 LVELADDEIGVHVVCPSFFQTNLLDSFRGPNPA-MKAQVGKL------LEKSPITAADIADYIYQQVAKG 226 (270)
T ss_pred HHHhcccCcEEEEEecCccccCcccccccCchh-HHHHHHHH------hhcCCCCHHHHHHHHHHHHhCC
Confidence 665 489999999999987643211110000 11111000 0123578999999999999753
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.26 E-value=1.3e-05 Score=62.79 Aligned_cols=103 Identities=18% Similarity=0.169 Sum_probs=73.4
Q ss_pred chhHhHHHHHHHH----HHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIV----AAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~----a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++ ++++.+..++|++||.+++++.+ ....|+.+|...+.+++.+
T Consensus 107 ~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~---------------------~~~~Y~asK~a~~~~~~~l 165 (257)
T PRK07024 107 MDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLP---------------------GAGAYSASKAAAIKYLESL 165 (257)
T ss_pred HhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCC---------------------CCcchHHHHHHHHHHHHHH
Confidence 5789999998776 55566667999999964444211 1356999999999999887
Q ss_pred HH---HcCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 78 AV---ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 78 ~~---~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
+. ..|++++++||+.+.++..... . ++ ....+..+|+++.++.++.+.
T Consensus 166 ~~e~~~~gi~v~~v~Pg~v~t~~~~~~-------------~----~~--~~~~~~~~~~a~~~~~~l~~~ 216 (257)
T PRK07024 166 RVELRPAGVRVVTIAPGYIRTPMTAHN-------------P----YP--MPFLMDADRFAARAARAIARG 216 (257)
T ss_pred HHHhhccCcEEEEEecCCCcCchhhcC-------------C----CC--CCCccCHHHHHHHHHHHHhCC
Confidence 53 4589999999999987632110 0 00 011357899999999999754
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.23 E-value=2.4e-05 Score=60.70 Aligned_cols=103 Identities=20% Similarity=0.198 Sum_probs=74.7
Q ss_pred chhHhHHHHHHHHHHHhc--CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~--~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++.++++++... +-.++|++||.++.++. .....|+.+|...+.+.+.++.
T Consensus 99 ~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~---------------------~~~~~Y~asK~a~~~~~~~l~~ 157 (240)
T PRK06101 99 FNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELAL---------------------PRAEAYGASKAAVAYFARTLQL 157 (240)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCC---------------------CCCchhhHHHHHHHHHHHHHHH
Confidence 678999999999999863 23579999986444321 1245799999999999887763
Q ss_pred ---HcCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 80 ---ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 80 ---~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
..|++++.+||+.++++..... ... ....+..+|+++.++.+++..
T Consensus 158 e~~~~gi~v~~v~pg~i~t~~~~~~---------------~~~----~~~~~~~~~~a~~i~~~i~~~ 206 (240)
T PRK06101 158 DLRPKGIEVVTVFPGFVATPLTDKN---------------TFA----MPMIITVEQASQEIRAQLARG 206 (240)
T ss_pred HHHhcCceEEEEeCCcCCCCCcCCC---------------CCC----CCcccCHHHHHHHHHHHHhcC
Confidence 4589999999999988642210 000 011467899999999999764
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.23 E-value=2.2e-05 Score=61.08 Aligned_cols=114 Identities=19% Similarity=0.127 Sum_probs=77.0
Q ss_pred chhHhHHHHHHHHHHHhc----CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++.+. +..++|++||. ..+... .....|+.+|...+.+++.+
T Consensus 112 ~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~y~~sK~~~~~~~~~l 170 (250)
T PRK12939 112 MNVNVRGTFLMLRAALPHLRDSGRGRIVNLASD-TALWGA--------------------PKLGAYVASKGAVIGMTRSL 170 (250)
T ss_pred HHHhhHHHHHHHHHHHHHHHHcCCeEEEEECch-hhccCC--------------------CCcchHHHHHHHHHHHHHHH
Confidence 468999999999888643 23589999995 433111 12356999999999999887
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
+.+ .+++++.++|+.+..+....... .........+. ....+++++|+++++..++...
T Consensus 171 ~~~~~~~~i~v~~v~pg~v~t~~~~~~~~--~~~~~~~~~~~------~~~~~~~~~dva~~~~~l~~~~ 232 (250)
T PRK12939 171 ARELGGRGITVNAIAPGLTATEATAYVPA--DERHAYYLKGR------ALERLQVPDDVAGAVLFLLSDA 232 (250)
T ss_pred HHHHhhhCEEEEEEEECCCCCccccccCC--hHHHHHHHhcC------CCCCCCCHHHHHHHHHHHhCcc
Confidence 654 47999999999887664321110 01112222221 2245789999999999999754
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.23 E-value=3.3e-05 Score=61.89 Aligned_cols=115 Identities=17% Similarity=0.090 Sum_probs=78.4
Q ss_pred chhHhHHHHHHHHHHHhc--CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~--~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++..+++++... .-.++|++||. +.+.... ....|+.+|...+.+++.++.
T Consensus 157 ~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~-~~~~~~~--------------------~~~~Y~asKaal~~l~~~la~ 215 (294)
T PRK07985 157 FAINVFALFWLTQEAIPLLPKGASIITTSSI-QAYQPSP--------------------HLLDYAATKAAILNYSRGLAK 215 (294)
T ss_pred HHHHhHHHHHHHHHHHHhhhcCCEEEEECCc-hhccCCC--------------------CcchhHHHHHHHHHHHHHHHH
Confidence 679999999999998753 12589999995 5442111 135699999999999988876
Q ss_pred H---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 80 A---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 80 ~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
+ .|+++.+++|+.+.++..... .........+....+ ...+...+|+|+++.+++...
T Consensus 216 el~~~gIrvn~i~PG~v~t~~~~~~-~~~~~~~~~~~~~~~------~~r~~~pedva~~~~fL~s~~ 276 (294)
T PRK07985 216 QVAEKGIRVNIVAPGPIWTALQISG-GQTQDKIPQFGQQTP------MKRAGQPAELAPVYVYLASQE 276 (294)
T ss_pred HHhHhCcEEEEEECCcCcccccccc-CCCHHHHHHHhccCC------CCCCCCHHHHHHHHHhhhChh
Confidence 5 489999999999998753211 001111222222111 123567899999999988643
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.22 E-value=2.5e-05 Score=61.04 Aligned_cols=114 Identities=16% Similarity=0.103 Sum_probs=78.2
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++.+ .+..++|++||.++.++.. ....|+.+|...+.+.+.+
T Consensus 117 ~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---------------------~~~~Y~~sK~a~~~~~~~l 175 (255)
T PRK06841 117 IDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALE---------------------RHVAYCASKAGVVGMTKVL 175 (255)
T ss_pred HHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCC---------------------CCchHHHHHHHHHHHHHHH
Confidence 57899999999999864 3467999999964444321 1356999999999888888
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
+.+ .|+++..++|+.+..+....... ...........+ ...+.+.+|++++++.++...
T Consensus 176 a~e~~~~gi~v~~v~pg~v~t~~~~~~~~--~~~~~~~~~~~~------~~~~~~~~~va~~~~~l~~~~ 237 (255)
T PRK06841 176 ALEWGPYGITVNAISPTVVLTELGKKAWA--GEKGERAKKLIP------AGRFAYPEEIAAAALFLASDA 237 (255)
T ss_pred HHHHHhhCeEEEEEEeCcCcCcccccccc--hhHHHHHHhcCC------CCCCcCHHHHHHHHHHHcCcc
Confidence 765 48999999999997654221111 011111221111 235789999999999998653
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=98.22 E-value=2.7e-05 Score=60.91 Aligned_cols=114 Identities=13% Similarity=0.022 Sum_probs=76.5
Q ss_pred chhHhHHHHHHHHHHHhc---CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA---KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA 78 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~---~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~ 78 (239)
+++|+.++.++++++.+. ...++|++||.++.++.. ....|+.+|...+.+++.++
T Consensus 114 ~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~---------------------~~~~Y~~sKaa~~~~~~~la 172 (255)
T PRK05717 114 LAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEP---------------------DTEAYAASKGGLLALTHALA 172 (255)
T ss_pred HHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCC---------------------CCcchHHHHHHHHHHHHHHH
Confidence 578999999999999642 236899999964433211 13569999999999999988
Q ss_pred HHc--CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 79 VAR--GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 79 ~~~--~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
... ++++..++|+.+.++....... ..+........+ ...+.+.+|++.++.+++...
T Consensus 173 ~~~~~~i~v~~i~Pg~i~t~~~~~~~~---~~~~~~~~~~~~-----~~~~~~~~~va~~~~~l~~~~ 232 (255)
T PRK05717 173 ISLGPEIRVNAVSPGWIDARDPSQRRA---EPLSEADHAQHP-----AGRVGTVEDVAAMVAWLLSRQ 232 (255)
T ss_pred HHhcCCCEEEEEecccCcCCccccccc---hHHHHHHhhcCC-----CCCCcCHHHHHHHHHHHcCch
Confidence 775 4888999999998864221100 111111111111 124678999999999888643
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.22 E-value=2.5e-05 Score=60.44 Aligned_cols=111 Identities=10% Similarity=0.066 Sum_probs=77.0
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++.. .+.+++|++||..++++. .+...|+.+|.+.+.+++.+
T Consensus 112 ~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~~ 170 (239)
T PRK07666 112 IQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGA---------------------AVTSAYSASKFGVLGLTESL 170 (239)
T ss_pred HHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCC---------------------CCCcchHHHHHHHHHHHHHH
Confidence 57899999999888863 446789999996443321 12456999999999888777
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCceEE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYL 151 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~ 151 (239)
+.+ .|++++++||+.+..+..... ....+ ....++..+|+|+++..++... .++|.
T Consensus 171 a~e~~~~gi~v~~v~pg~v~t~~~~~~---------~~~~~-------~~~~~~~~~~~a~~~~~~l~~~--~~~~~ 229 (239)
T PRK07666 171 MQEVRKHNIRVTALTPSTVATDMAVDL---------GLTDG-------NPDKVMQPEDLAEFIVAQLKLN--KRTFI 229 (239)
T ss_pred HHHhhccCcEEEEEecCcccCcchhhc---------ccccc-------CCCCCCCHHHHHHHHHHHHhCC--CceEE
Confidence 643 589999999999976532110 00011 1123577899999999999765 24553
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.22 E-value=3.2e-05 Score=59.68 Aligned_cols=114 Identities=12% Similarity=0.068 Sum_probs=76.6
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++.. .+..++|++||.++.++. .....|+.+|...+.+.+.+
T Consensus 96 ~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~l 154 (235)
T PRK06550 96 FDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAG---------------------GGGAAYTASKHALAGFTKQL 154 (235)
T ss_pred HHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCC---------------------CCCcccHHHHHHHHHHHHHH
Confidence 57899999999998854 334689999996333211 12456999999998888877
Q ss_pred HHHc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
+.+. |+++++++|+.+..+....... .......+....+ ...+...+|+|++++.++..
T Consensus 155 a~~~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~~------~~~~~~~~~~a~~~~~l~s~ 216 (235)
T PRK06550 155 ALDYAKDGIQVFGIAPGAVKTPMTAADFE-PGGLADWVARETP------IKRWAEPEEVAELTLFLASG 216 (235)
T ss_pred HHHhhhcCeEEEEEeeCCccCcccccccC-chHHHHHHhccCC------cCCCCCHHHHHHHHHHHcCh
Confidence 7653 8999999999998774322111 1111122222211 23367789999999999864
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.21 E-value=3.1e-05 Score=60.35 Aligned_cols=113 Identities=18% Similarity=0.089 Sum_probs=73.2
Q ss_pred chhHhHHHHHHHHHH----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..+++++ .+.+..++|++||. +.+.. ..+...|+.+|...+.+.+.+
T Consensus 103 ~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~-~~~~~--------------------~~~~~~Y~~sK~~~~~~~~~l 161 (248)
T PRK10538 103 IDTNNKGLVYMTRAVLPGMVERNHGHIINIGST-AGSWP--------------------YAGGNVYGATKAFVRQFSLNL 161 (248)
T ss_pred HHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCc-ccCCC--------------------CCCCchhHHHHHHHHHHHHHH
Confidence 578888865555554 55667899999995 32210 012467999999999999888
Q ss_pred HHH---cCccEEEEecCcccCCCCCCC-CChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQST-VNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
+.. .++.+.+++||.+.|+..... ............. ...++..+|+|++++.++..+
T Consensus 162 ~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dvA~~~~~l~~~~ 223 (248)
T PRK10538 162 RTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQ---------NTVALTPEDVSEAVWWVATLP 223 (248)
T ss_pred HHHhcCCCcEEEEEeCCeecccccchhhccCcHHHHHhhcc---------ccCCCCHHHHHHHHHHHhcCC
Confidence 765 378999999999987642110 0000001111111 123568999999999998755
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=98.21 E-value=2.2e-05 Score=63.79 Aligned_cols=96 Identities=14% Similarity=-0.039 Sum_probs=60.6
Q ss_pred chhHhHHHHHHHHHHHh----cC--CCEEEEccchhhhccCCCCCCCcc--ccCCCCC------------ChhhcccCCc
Q 026418 2 VEPAVIGTKNVIVAAAE----AK--VRRVVFTSSIGAVYMDPNRSPDDV--VDESCWS------------DLEFCKNTKN 61 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~--v~~~i~~Ss~~~vy~~~~~~~~~~--~~E~~~~------------~~~~~~~~~~ 61 (239)
+++|+.|+.++++++.. .+ ..++|++||.+..++...+....+ .+.++.. ....+..|..
T Consensus 112 ~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (322)
T PRK07453 112 MATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPADLGDLSGFEAGFKAPISMADGKKFKPGK 191 (322)
T ss_pred HhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCccchhhhhcchhcccccccccCccCCCccc
Confidence 67899999999888764 22 359999999633332111100000 0100000 0001124567
Q ss_pred hHHHHHHHHHHHHHHHHHHc----CccEEEEecCcccCCC
Q 026418 62 WYCYGKAVAEKAAWEEAVAR----GVDLVVVNPVLVLGPL 97 (239)
Q Consensus 62 ~Y~~sK~~~E~~~~~~~~~~----~~~~~i~Rp~~v~G~~ 97 (239)
.|+.||.+.+.+.+.++++. |+.++.+|||.|++..
T Consensus 192 ~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~ 231 (322)
T PRK07453 192 AYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTP 231 (322)
T ss_pred hhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCc
Confidence 89999999988888887764 7999999999998754
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=98.21 E-value=3.5e-05 Score=61.18 Aligned_cols=127 Identities=18% Similarity=0.121 Sum_probs=79.8
Q ss_pred chhHhHHHHHHHHHHHhc----CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++.+. +-.++|++||.++.++.. ....|+.+|.+.|.+++.+
T Consensus 124 ~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~---------------------~~~~Y~~sK~a~~~~~~~l 182 (280)
T PLN02253 124 FDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGL---------------------GPHAYTGSKHAVLGLTRSV 182 (280)
T ss_pred HhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCC---------------------CCcccHHHHHHHHHHHHHH
Confidence 678999999999888642 335789998865544321 1346999999999999988
Q ss_pred HHHc---CccEEEEecCcccCCCCCCCCC---hhHHHHH---HHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--C
Q 026418 78 AVAR---GVDLVVVNPVLVLGPLLQSTVN---ASIIHIL---KYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--A 146 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~~~~~~~---~~~~~~~---~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~ 146 (239)
+.+. ++++..++|+.+..+....... .....+. ........ .....++.+|+|+++++++.... .
T Consensus 183 a~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~~~~~~~~dva~~~~~l~s~~~~~i 258 (280)
T PLN02253 183 AAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNAN----LKGVELTVDDVANAVLFLASDEARYI 258 (280)
T ss_pred HHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCC----CcCCCCCHHHHHHHHHhhcCcccccc
Confidence 7754 7999999999997753211100 0001111 11111110 01235789999999999886432 2
Q ss_pred Cc-eEEEe
Q 026418 147 SG-RYLCA 153 (239)
Q Consensus 147 ~~-~y~~~ 153 (239)
.| .+.+.
T Consensus 259 ~G~~i~vd 266 (280)
T PLN02253 259 SGLNLMID 266 (280)
T ss_pred cCcEEEEC
Confidence 34 55554
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=98.18 E-value=6.6e-05 Score=58.41 Aligned_cols=115 Identities=10% Similarity=0.013 Sum_probs=78.1
Q ss_pred chhHhHHHHHHHHHHHh----cC-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++.++++++.+ .+ ..++|++||. ..+.... ....|+.+|.+.+.+++.
T Consensus 108 ~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~-~~~~~~~--------------------~~~~Y~~sKaa~~~~~~~ 166 (248)
T TIGR01832 108 MNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASM-LSFQGGI--------------------RVPSYTASKHGVAGLTKL 166 (248)
T ss_pred HhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecH-HhccCCC--------------------CCchhHHHHHHHHHHHHH
Confidence 57899999999998853 33 4689999995 5553211 134699999999999999
Q ss_pred HHHHc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 77 EAVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 77 ~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
++++. |+++.+++||.+..+....... ............ + ...++..+|+|+++++++...
T Consensus 167 la~e~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~----~--~~~~~~~~dva~~~~~l~s~~ 230 (248)
T TIGR01832 167 LANEWAAKGINVNAIAPGYMATNNTQALRA-DEDRNAAILERI----P--AGRWGTPDDIGGPAVFLASSA 230 (248)
T ss_pred HHHHhCccCcEEEEEEECcCcCcchhcccc-ChHHHHHHHhcC----C--CCCCcCHHHHHHHHHHHcCcc
Confidence 88764 8999999999997664221100 001111111111 1 245889999999999998753
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.18 E-value=3.8e-05 Score=62.16 Aligned_cols=130 Identities=18% Similarity=0.125 Sum_probs=74.1
Q ss_pred chhHhHHHHHHHH----HHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIV----AAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~----a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..+++ ++++.+..++|++||. +...... ..++... ..+..+...|+.||.+.+.+.+.+
T Consensus 125 ~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~-~~~~~~~-----~~~~~~~---~~~~~~~~~Y~~SK~a~~~~~~~l 195 (315)
T PRK06196 125 FATNHLGHFALVNLLWPALAAGAGARVVALSSA-GHRRSPI-----RWDDPHF---TRGYDKWLAYGQSKTANALFAVHL 195 (315)
T ss_pred HHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCH-HhccCCC-----CccccCc---cCCCChHHHHHHHHHHHHHHHHHH
Confidence 5688888655555 5555555799999995 4321111 1111000 001133567999999999998887
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
++. .|++++.++||.+.++..... .................+. ..+...+|+|..+++++..+
T Consensus 196 a~~~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~a~~~~~l~~~~ 261 (315)
T PRK06196 196 DKLGKDQGVRAFSVHPGGILTPLQRHL-PREEQVALGWVDEHGNPID---PGFKTPAQGAATQVWAATSP 261 (315)
T ss_pred HHHhcCCCcEEEEeeCCcccCCccccC-Chhhhhhhhhhhhhhhhhh---hhcCCHhHHHHHHHHHhcCC
Confidence 654 489999999999998753211 1000000001110000000 02456789999999888644
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.17 E-value=3.2e-05 Score=60.41 Aligned_cols=114 Identities=15% Similarity=0.127 Sum_probs=76.4
Q ss_pred chhHhHHHHHHHHHHHhcC--CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~--v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++..+++++.+.- ..++|++||. +.+... .....|+.+|...+.+++.++.
T Consensus 116 ~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~~sKaa~~~~~~~la~ 174 (252)
T PRK12747 116 VSVNAKAPFFIIQQALSRLRDNSRIINISSA-ATRISL--------------------PDFIAYSMTKGAINTMTFTLAK 174 (252)
T ss_pred HHHhhhHHHHHHHHHHHHhhcCCeEEEECCc-ccccCC--------------------CCchhHHHHHHHHHHHHHHHHH
Confidence 5799999999998886542 3589999996 433111 1246799999999999988776
Q ss_pred H---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 80 A---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 80 ~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
+ .|+++..+.|+.+.++....... . ........... ....+.+.+|+|+++.+++..
T Consensus 175 e~~~~girvn~v~Pg~v~t~~~~~~~~-~-~~~~~~~~~~~-----~~~~~~~~~dva~~~~~l~s~ 234 (252)
T PRK12747 175 QLGARGITVNAILPGFIKTDMNAELLS-D-PMMKQYATTIS-----AFNRLGEVEDIADTAAFLASP 234 (252)
T ss_pred HHhHcCCEEEEEecCCccCchhhhccc-C-HHHHHHHHhcC-----cccCCCCHHHHHHHHHHHcCc
Confidence 5 38999999999998764221100 0 11111111110 123477899999999998864
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.17 E-value=2.6e-05 Score=60.71 Aligned_cols=116 Identities=16% Similarity=0.131 Sum_probs=76.2
Q ss_pred chhHhH----HHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVI----GTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~----~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+. ++++++.++++.+.+++|++||. +.+.... ....|+.+|...+.+++.+
T Consensus 107 ~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~-~~~~~~~--------------------~~~~Y~~sK~a~~~~~~~l 165 (251)
T PRK07069 107 MAINVESIFLGCKHALPYLRASQPASIVNISSV-AAFKAEP--------------------DYTAYNASKAAVASLTKSI 165 (251)
T ss_pred HHHhhHHHHHHHHHHHHHHhhcCCcEEEEecCh-hhccCCC--------------------CCchhHHHHHHHHHHHHHH
Confidence 456776 88888899888777899999995 4442211 2356999999999999887
Q ss_pred HHHc-----CccEEEEecCcccCCCCCCCCC--hhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 78 AVAR-----GVDLVVVNPVLVLGPLLQSTVN--ASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 78 ~~~~-----~~~~~i~Rp~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
+... ++++..++|+.+.++....... .....+..+.++.+ ...+.+.+|++++++.++...
T Consensus 166 a~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~va~~~~~l~~~~ 233 (251)
T PRK07069 166 ALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVP------LGRLGEPDDVAHAVLYLASDE 233 (251)
T ss_pred HHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCC------CCCCcCHHHHHHHHHHHcCcc
Confidence 6542 4788999999998875321100 00011112222211 123567999999999987643
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.15 E-value=5.1e-05 Score=58.67 Aligned_cols=75 Identities=17% Similarity=0.115 Sum_probs=57.9
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++. +.+..++|++||. ..+... .+...|+.+|...|.+.+.+
T Consensus 102 ~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~-~~~~~~--------------------~~~~~y~~sK~a~~~~~~~l 160 (238)
T PRK08264 102 METNYFGPLAMARAFAPVLAANGGGAIVNVLSV-LSWVNF--------------------PNLGTYSASKAAAWSLTQAL 160 (238)
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCh-hhccCC--------------------CCchHhHHHHHHHHHHHHHH
Confidence 4689999999999875 3456789999995 544211 23567999999999998887
Q ss_pred HHH---cCccEEEEecCcccCCC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPL 97 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~ 97 (239)
+.. .+++++++||+.+.++.
T Consensus 161 ~~~~~~~~i~~~~v~pg~v~t~~ 183 (238)
T PRK08264 161 RAELAPQGTRVLGVHPGPIDTDM 183 (238)
T ss_pred HHHhhhcCeEEEEEeCCcccccc
Confidence 665 38999999999997653
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.15 E-value=5.1e-05 Score=57.73 Aligned_cols=118 Identities=21% Similarity=0.210 Sum_probs=81.0
Q ss_pred CchhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 1 MVEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 1 ~~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
|+++|+.|..++..+.. +.+..++|.+||+++.|..+ ..+.|+.+|+....+.+.
T Consensus 108 Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~---------------------~~~vY~ATK~aV~~fs~~ 166 (246)
T COG4221 108 MIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYP---------------------GGAVYGATKAAVRAFSLG 166 (246)
T ss_pred HHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCC---------------------CCccchhhHHHHHHHHHH
Confidence 68999999999888774 33445999999996666322 246799999999988887
Q ss_pred HHHH---cCccEEEEecCcccCCCCCC-CCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCc
Q 026418 77 EAVA---RGVDLVVVNPVLVLGPLLQS-TVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASG 148 (239)
Q Consensus 77 ~~~~---~~~~~~i~Rp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~ 148 (239)
+.++ .+++++.+-|+.+-...... .+........+...+ ...+..+|+|+++.+++..|..-.
T Consensus 167 LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y~~---------~~~l~p~dIA~~V~~~~~~P~~vn 233 (246)
T COG4221 167 LRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVYKG---------GTALTPEDIAEAVLFAATQPQHVN 233 (246)
T ss_pred HHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHHhcc---------CCCCCHHHHHHHHHHHHhCCCccc
Confidence 7665 38999999999884421110 000011122222222 346788999999999999887544
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.14 E-value=4.1e-05 Score=60.55 Aligned_cols=105 Identities=22% Similarity=0.167 Sum_probs=71.5
Q ss_pred chhHhHHHHHHHHHH----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++ ++.+..++|++||.++..+ . .....|+.+|...+.+.+.+
T Consensus 106 ~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-~--------------------~~~~~Y~asKaa~~~~~~~l 164 (273)
T PRK07825 106 LDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIP-V--------------------PGMATYCASKHAVVGFTDAA 164 (273)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCC-C--------------------CCCcchHHHHHHHHHHHHHH
Confidence 578998888877665 4556779999999633221 1 12467999999888776665
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS 145 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 145 (239)
..+ .|+++++++|+.+-.+... +.. ......++..+|+|++++.++.++.
T Consensus 165 ~~el~~~gi~v~~v~Pg~v~t~~~~---------------~~~---~~~~~~~~~~~~va~~~~~~l~~~~ 217 (273)
T PRK07825 165 RLELRGTGVHVSVVLPSFVNTELIA---------------GTG---GAKGFKNVEPEDVAAAIVGTVAKPR 217 (273)
T ss_pred HHHhhccCcEEEEEeCCcCcchhhc---------------ccc---cccCCCCCCHHHHHHHHHHHHhCCC
Confidence 443 5899999999988543211 000 0112347889999999999998654
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.12 E-value=3e-05 Score=60.65 Aligned_cols=118 Identities=19% Similarity=0.167 Sum_probs=69.7
Q ss_pred chhHhHHHHHHHH----HHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIV----AAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~----a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++.+ ++.+.+.+++|++||.++..+. .....|+.+|...|.+.+.+
T Consensus 101 ~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~l 159 (257)
T PRK09291 101 FETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITG---------------------PFTGAYCASKHALEAIAEAM 159 (257)
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCC---------------------CCcchhHHHHHHHHHHHHHH
Confidence 4578887766554 4455667899999996332211 12467999999999988776
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCC--Ccc--CCCCCCceehHHHHHHHHHhhcCC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSA--KTY--ANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
... .|++++++||+.+.-+... .. ...+........ ... .......+..+|+++.++.++..+
T Consensus 160 ~~~~~~~gi~~~~v~pg~~~t~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 229 (257)
T PRK09291 160 HAELKPFGIQVATVNPGPYLTGFND-TM---AETPKRWYDPARNFTDPEDLAFPLEQFDPQEMIDAMVEVIPAD 229 (257)
T ss_pred HHHHHhcCcEEEEEecCcccccchh-hh---hhhhhhhcchhhHHHhhhhhhccccCCCHHHHHHHHHHHhcCC
Confidence 543 5899999999877432110 00 000111111000 001 111234578888888888877644
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.12 E-value=5.8e-05 Score=59.08 Aligned_cols=116 Identities=17% Similarity=0.122 Sum_probs=72.5
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..+++++. +.+..++|++||..++++.. .+...|+.+|...+.+.+.+
T Consensus 109 ~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~--------------------~~~~~Y~~sKaal~~~~~~l 168 (255)
T PRK06057 109 QDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSA--------------------TSQISYTASKGGVLAMSREL 168 (255)
T ss_pred HHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCC--------------------CCCcchHHHHHHHHHHHHHH
Confidence 5688998887777664 34456899999964555421 12356999998777666654
Q ss_pred HH---HcCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 78 AV---ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 78 ~~---~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
+. ..|++++++||+.+.++..............+... ..+ ...+..++|+++++..++..
T Consensus 169 ~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~----~~~--~~~~~~~~~~a~~~~~l~~~ 231 (255)
T PRK06057 169 GVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLV----HVP--MGRFAEPEEIAAAVAFLASD 231 (255)
T ss_pred HHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHh----cCC--CCCCcCHHHHHHHHHHHhCc
Confidence 33 24899999999999877532211100111111110 111 12578899999999887764
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=98.10 E-value=8.8e-05 Score=57.50 Aligned_cols=123 Identities=18% Similarity=0.169 Sum_probs=77.7
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++.+ .+..++|++||.++.++.+ ....|+.+|...+.+++.+
T Consensus 108 ~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---------------------~~~~Y~~sk~a~~~~~~~l 166 (245)
T PRK12936 108 LEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNP---------------------GQANYCASKAGMIGFSKSL 166 (245)
T ss_pred HhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCC---------------------CCcchHHHHHHHHHHHHHH
Confidence 57899999988887653 3467899999964555321 1346999999888777776
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCC--Cc-eEE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSA--SG-RYL 151 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~y~ 151 (239)
+.+ .+++++.++|+.+..+.... .. ........+.. ....+.+.+|+++++.+++..... .| +++
T Consensus 167 a~~~~~~~i~v~~i~pg~~~t~~~~~-~~---~~~~~~~~~~~-----~~~~~~~~~~ia~~~~~l~~~~~~~~~G~~~~ 237 (245)
T PRK12936 167 AQEIATRNVTVNCVAPGFIESAMTGK-LN---DKQKEAIMGAI-----PMKRMGTGAEVASAVAYLASSEAAYVTGQTIH 237 (245)
T ss_pred HHHhhHhCeEEEEEEECcCcCchhcc-cC---hHHHHHHhcCC-----CCCCCcCHHHHHHHHHHHcCccccCcCCCEEE
Confidence 554 47999999999875543211 00 11111111111 112356799999999888764322 34 566
Q ss_pred Eec
Q 026418 152 CAE 154 (239)
Q Consensus 152 ~~~ 154 (239)
+.+
T Consensus 238 ~~~ 240 (245)
T PRK12936 238 VNG 240 (245)
T ss_pred ECC
Confidence 554
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.09 E-value=0.00012 Score=56.71 Aligned_cols=122 Identities=14% Similarity=0.111 Sum_probs=78.2
Q ss_pred chhHhHHHHHHHHH----HHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVA----AAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a----~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++.++ +++.+..++|++||. ..+... .....|+.+|.+.+.+++.+
T Consensus 108 ~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~-~~~~~~--------------------~~~~~Y~~sK~a~~~~~~~l 166 (245)
T PRK12824 108 INTNLNSVFNVTQPLFAAMCEQGYGRIINISSV-NGLKGQ--------------------FGQTNYSAAKAGMIGFTKAL 166 (245)
T ss_pred HHHHhHHHHHHHHHHHHHHHHhCCeEEEEECCh-hhccCC--------------------CCChHHHHHHHHHHHHHHHH
Confidence 46899998887554 455667899999995 433211 12356999999998888777
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-eEE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL 151 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~ 151 (239)
+.. .++++.+++|+.+.++...... ......+....+ ...+...+|+++++..++.... ..| +++
T Consensus 167 ~~~~~~~~i~v~~v~pg~~~t~~~~~~~---~~~~~~~~~~~~------~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~ 237 (245)
T PRK12824 167 ASEGARYGITVNCIAPGYIATPMVEQMG---PEVLQSIVNQIP------MKRLGTPEEIAAAVAFLVSEAAGFITGETIS 237 (245)
T ss_pred HHHHHHhCeEEEEEEEcccCCcchhhcC---HHHHHHHHhcCC------CCCCCCHHHHHHHHHHHcCccccCccCcEEE
Confidence 653 4899999999999876432111 112222222221 1335568999999988885432 223 565
Q ss_pred Ee
Q 026418 152 CA 153 (239)
Q Consensus 152 ~~ 153 (239)
+.
T Consensus 238 ~~ 239 (245)
T PRK12824 238 IN 239 (245)
T ss_pred EC
Confidence 54
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.09 E-value=8.5e-05 Score=58.07 Aligned_cols=114 Identities=11% Similarity=0.092 Sum_probs=76.7
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..+++++.+ .+..++|++||..+.++. .+...|+.+|.+.+.+++.+
T Consensus 114 ~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~l 172 (254)
T PRK08085 114 IAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGR---------------------DTITPYAASKGAVKMLTRGM 172 (254)
T ss_pred HHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCC---------------------CCCcchHHHHHHHHHHHHHH
Confidence 57899998888887764 345789999996332211 12467999999999999998
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
+.+ .|+++..++||.+..+....... ... +........ + ...+...+|++.++.+++..
T Consensus 173 a~e~~~~gi~v~~v~pG~~~t~~~~~~~~-~~~-~~~~~~~~~---p--~~~~~~~~~va~~~~~l~~~ 234 (254)
T PRK08085 173 CVELARHNIQVNGIAPGYFKTEMTKALVE-DEA-FTAWLCKRT---P--AARWGDPQELIGAAVFLSSK 234 (254)
T ss_pred HHHHHhhCeEEEEEEeCCCCCcchhhhcc-CHH-HHHHHHhcC---C--CCCCcCHHHHHHHHHHHhCc
Confidence 765 38999999999998774322111 011 111111111 1 13367789999999998864
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.08 E-value=8.5e-05 Score=58.12 Aligned_cols=115 Identities=12% Similarity=0.090 Sum_probs=77.1
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++.+ .+..++|++||..+.++. .....|+.+|.+.+.+++.+
T Consensus 116 ~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~l 174 (256)
T PRK06124 116 LETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVAR---------------------AGDAVYPAAKQGLTGLMRAL 174 (256)
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCC---------------------CCccHhHHHHHHHHHHHHHH
Confidence 56899999998866654 566899999996332211 11367999999999988877
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
+.+ .++++..++|+.+.++....... ... +...+....+ ...+++.+|++.+++.++...
T Consensus 175 a~e~~~~~i~v~~i~pg~v~t~~~~~~~~-~~~-~~~~~~~~~~-----~~~~~~~~~~a~~~~~l~~~~ 237 (256)
T PRK06124 175 AAEFGPHGITSNAIAPGYFATETNAAMAA-DPA-VGPWLAQRTP-----LGRWGRPEEIAGAAVFLASPA 237 (256)
T ss_pred HHHHHHhCcEEEEEEECCccCcchhhhcc-ChH-HHHHHHhcCC-----CCCCCCHHHHHHHHHHHcCcc
Confidence 654 37999999999998875321111 111 1122221111 134788999999999999765
|
|
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.08 E-value=3.5e-05 Score=63.33 Aligned_cols=119 Identities=18% Similarity=0.078 Sum_probs=72.6
Q ss_pred hhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHcC
Q 026418 3 EPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVARG 82 (239)
Q Consensus 3 ~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~ 82 (239)
.+...|++|+++||+.+|++|+|++|++ . ... .+...+.. .....+-.+|+.+|..+ ++.|
T Consensus 175 ~VD~~g~knlvdA~~~aGvk~~vlv~si-~---~~~------~~~~~~~~-----~~~~~~~~~k~~~e~~~----~~Sg 235 (411)
T KOG1203|consen 175 KVDYEGTKNLVDACKKAGVKRVVLVGSI-G---GTK------FNQPPNIL-----LLNGLVLKAKLKAEKFL----QDSG 235 (411)
T ss_pred eecHHHHHHHHHHHHHhCCceEEEEEee-c---Ccc------cCCCchhh-----hhhhhhhHHHHhHHHHH----HhcC
Confidence 3667899999999999999999999996 2 111 11111100 00223557777777766 4669
Q ss_pred ccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCcc-CCCCCCceehHHHHHHHHHhhcCCCCCc
Q 026418 83 VDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY-ANSVQAYVHVRDVALAHILVYETPSASG 148 (239)
Q Consensus 83 ~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~D~a~~~~~~~~~~~~~~ 148 (239)
++++++|++...-..... ..-......-.+ +++.--.+.-.|+|+.++.++.+....+
T Consensus 236 l~ytiIR~g~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~i~r~~vael~~~all~~~~~~ 294 (411)
T KOG1203|consen 236 LPYTIIRPGGLEQDTGGQ--------REVVVDDEKELLTVDGGAYSISRLDVAELVAKALLNEAATF 294 (411)
T ss_pred CCcEEEeccccccCCCCc--------ceecccCccccccccccceeeehhhHHHHHHHHHhhhhhcc
Confidence 999999998775432110 001111111111 2222246778899999999988775544
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.06 E-value=6.1e-05 Score=58.43 Aligned_cols=113 Identities=13% Similarity=0.048 Sum_probs=74.6
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++.. .+.+++|++||.+.+++.. ....|+.+|...+.+++.+
T Consensus 111 ~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~---------------------~~~~y~~sK~a~~~~~~~~ 169 (247)
T PRK05565 111 IDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGAS---------------------CEVLYSASKGAVNAFTKAL 169 (247)
T ss_pred HHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCC---------------------CccHHHHHHHHHHHHHHHH
Confidence 56899998888877754 4457899999964444321 1356999999888887777
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
+.+ .|++++++||+.+..+...... ......+... . ....+...+|++++++.++...
T Consensus 170 ~~~~~~~gi~~~~v~pg~v~t~~~~~~~---~~~~~~~~~~----~--~~~~~~~~~~va~~~~~l~~~~ 230 (247)
T PRK05565 170 AKELAPSGIRVNAVAPGAIDTEMWSSFS---EEDKEGLAEE----I--PLGRLGKPEEIAKVVLFLASDD 230 (247)
T ss_pred HHHHHHcCeEEEEEEECCccCccccccC---hHHHHHHHhc----C--CCCCCCCHHHHHHHHHHHcCCc
Confidence 654 4899999999998765432211 1111111111 1 1233668899999999988654
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=98.05 E-value=9.4e-05 Score=57.21 Aligned_cols=112 Identities=18% Similarity=0.134 Sum_probs=75.1
Q ss_pred chhHhHHHHHHHHHHH-----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA-----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~-----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++.++++++. +.+..++|++||.+++++.+ ....|+.+|...+.+.+.
T Consensus 104 ~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~---------------------~~~~Y~~sK~a~~~~~~~ 162 (239)
T TIGR01831 104 IHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNR---------------------GQVNYSAAKAGLIGATKA 162 (239)
T ss_pred HHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCC---------------------CCcchHHHHHHHHHHHHH
Confidence 5789999999998762 23456899999975555321 135699999998887777
Q ss_pred HHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 77 ~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
++.. .|+++..++|+.+.++..... ...........+ ...+...+|+++++.+++...
T Consensus 163 la~e~~~~gi~v~~v~Pg~v~t~~~~~~----~~~~~~~~~~~~------~~~~~~~~~va~~~~~l~~~~ 223 (239)
T TIGR01831 163 LAVELAKRKITVNCIAPGLIDTEMLAEV----EHDLDEALKTVP------MNRMGQPAEVASLAGFLMSDG 223 (239)
T ss_pred HHHHHhHhCeEEEEEEEccCccccchhh----hHHHHHHHhcCC------CCCCCCHHHHHHHHHHHcCch
Confidence 6554 489999999999976643211 111222222111 122456799999999988743
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.04 E-value=0.00014 Score=56.37 Aligned_cols=123 Identities=19% Similarity=0.126 Sum_probs=79.8
Q ss_pred chhHhHHHHHHHHHHHhcC--CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~--v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++.++++++.+.- ..++|++||. +.+... .+...|+.+|...+.+++.++.
T Consensus 111 ~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~-~~~~~~--------------------~~~~~Y~~sK~a~~~~~~~~a~ 169 (245)
T PRK12937 111 IATNLRGAFVVLREAARHLGQGGRIINLSTS-VIALPL--------------------PGYGPYAASKAAVEGLVHVLAN 169 (245)
T ss_pred HhhhchHHHHHHHHHHHHhccCcEEEEEeec-cccCCC--------------------CCCchhHHHHHHHHHHHHHHHH
Confidence 5689999999999887642 3589999994 433111 1246799999999999988765
Q ss_pred H---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCC--Cc-eEEEe
Q 026418 80 A---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSA--SG-RYLCA 153 (239)
Q Consensus 80 ~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~y~~~ 153 (239)
+ .++.+++++|+.+-.+..... .....+..+.+..+ ..-+.+.+|+++++.+++..... .| ++++.
T Consensus 170 ~~~~~~i~v~~i~pg~~~t~~~~~~--~~~~~~~~~~~~~~------~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~ 241 (245)
T PRK12937 170 ELRGRGITVNAVAPGPVATELFFNG--KSAEQIDQLAGLAP------LERLGTPEEIAAAVAFLAGPDGAWVNGQVLRVN 241 (245)
T ss_pred HhhhcCeEEEEEEeCCccCchhccc--CCHHHHHHHHhcCC------CCCCCCHHHHHHHHHHHcCccccCccccEEEeC
Confidence 4 478999999998765531111 11122333333322 12245789999999998865432 24 45554
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.04 E-value=0.00011 Score=57.17 Aligned_cols=113 Identities=14% Similarity=0.083 Sum_probs=73.4
Q ss_pred chhHhHHHHHHHHHH----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..+.+++ .+.+..++|++||....++. .....|+.+|.+.+.+.+.+
T Consensus 109 ~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~---------------------~~~~~y~~sK~a~~~~~~~l 167 (246)
T PRK12938 109 IDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQ---------------------FGQTNYSTAKAGIHGFTMSL 167 (246)
T ss_pred HHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCC---------------------CCChhHHHHHHHHHHHHHHH
Confidence 568888866655554 45566799999995322211 12467999999988888777
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
++. .++++..++|+.+.++....- ....+..+....+ ...+...+|++.++.+++...
T Consensus 168 ~~~~~~~gi~v~~i~pg~~~t~~~~~~---~~~~~~~~~~~~~------~~~~~~~~~v~~~~~~l~~~~ 228 (246)
T PRK12938 168 AQEVATKGVTVNTVSPGYIGTDMVKAI---RPDVLEKIVATIP------VRRLGSPDEIGSIVAWLASEE 228 (246)
T ss_pred HHHhhhhCeEEEEEEecccCCchhhhc---ChHHHHHHHhcCC------ccCCcCHHHHHHHHHHHcCcc
Confidence 654 489999999999987643211 1122222222221 123556899999999888643
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.03 E-value=0.00019 Score=56.16 Aligned_cols=128 Identities=13% Similarity=0.082 Sum_probs=77.7
Q ss_pred chhHhHHHHHH----HHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNV----IVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~l----l~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..+ +..+++.+..++|++||. ..++... .....|+.+|.+.+.+++.+
T Consensus 107 ~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~-~~~~~~~-------------------~~~~~Y~asKaa~~~~~~~l 166 (255)
T PRK06463 107 IKINLNGAIYTTYEFLPLLKLSKNGAIVNIASN-AGIGTAA-------------------EGTTFYAITKAGIIILTRRL 166 (255)
T ss_pred HhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCH-HhCCCCC-------------------CCccHhHHHHHHHHHHHHHH
Confidence 57899996544 555554556799999995 5542110 12456999999999999988
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCC-ChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-eE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTV-NASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RY 150 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y 150 (239)
+.+ .|+++..++|+.+-.+...... ......+........ ....+...+|+++++++++.... ..| .+
T Consensus 167 a~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~va~~~~~l~s~~~~~~~G~~~ 241 (255)
T PRK06463 167 AFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKT-----VLKTTGKPEDIANIVLFLASDDARYITGQVI 241 (255)
T ss_pred HHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCC-----CcCCCcCHHHHHHHHHHHcChhhcCCCCCEE
Confidence 765 4899999999988543211100 000011111111111 12335679999999999886542 234 55
Q ss_pred EEec
Q 026418 151 LCAE 154 (239)
Q Consensus 151 ~~~~ 154 (239)
.+.|
T Consensus 242 ~~dg 245 (255)
T PRK06463 242 VADG 245 (255)
T ss_pred EECC
Confidence 5543
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.03 E-value=0.00019 Score=55.98 Aligned_cols=113 Identities=16% Similarity=0.050 Sum_probs=76.7
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++. +.+..++|++||. .... + ..+...|+.+|.+.|.+++.+
T Consensus 115 ~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~-~~~~--------~------------~~~~~~Y~~sK~a~~~l~~~l 173 (253)
T PRK08642 115 LEGSVKGALNTIQAALPGMREQGFGRIINIGTN-LFQN--------P------------VVPYHDYTTAKAALLGLTRNL 173 (253)
T ss_pred HhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCc-cccC--------C------------CCCccchHHHHHHHHHHHHHH
Confidence 5789999999999986 3345789999994 3211 0 123567999999999999999
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
+++ .|+++..++||.+-.+...... .......+....+ ...+.+.+|+++++.+++..
T Consensus 174 a~~~~~~~i~v~~i~pG~v~t~~~~~~~--~~~~~~~~~~~~~------~~~~~~~~~va~~~~~l~~~ 234 (253)
T PRK08642 174 AAELGPYGITVNMVSGGLLRTTDASAAT--PDEVFDLIAATTP------LRKVTTPQEFADAVLFFASP 234 (253)
T ss_pred HHHhCccCeEEEEEeecccCCchhhccC--CHHHHHHHHhcCC------cCCCCCHHHHHHHHHHHcCc
Confidence 776 4788999999988654321111 1112222222111 13478899999999998864
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.02 E-value=0.00026 Score=55.23 Aligned_cols=115 Identities=16% Similarity=0.081 Sum_probs=75.3
Q ss_pred chhHhHHHHHHHHHH----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..+++++ ++.+..++|++||..+.++. .+...|+.+|...+.+++.+
T Consensus 114 ~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------------------~~~~~Y~~sK~al~~~~~~l 172 (252)
T PRK07035 114 VDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPG---------------------DFQGIYSITKAAVISMTKAF 172 (252)
T ss_pred HHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCC---------------------CCCcchHHHHHHHHHHHHHH
Confidence 568999988888776 44456789999996332211 12467999999999999988
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
+++ .|+++..+.|+.+-.+....... ............+ ...+...+|+|+++.+++.+.
T Consensus 173 ~~e~~~~gi~v~~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~------~~~~~~~~~va~~~~~l~~~~ 235 (252)
T PRK07035 173 AKECAPFGIRVNALLPGLTDTKFASALFK-NDAILKQALAHIP------LRRHAEPSEMAGAVLYLASDA 235 (252)
T ss_pred HHHHhhcCEEEEEEeeccccCcccccccC-CHHHHHHHHccCC------CCCcCCHHHHHHHHHHHhCcc
Confidence 765 37999999999886543211111 1112222222111 123566899999999988754
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.00 E-value=0.00014 Score=56.92 Aligned_cols=123 Identities=13% Similarity=0.028 Sum_probs=78.9
Q ss_pred chhHhHHHHHHHHHHHhcC-----CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK-----VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~-----v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++..+++++.+.- -.++|++||.++..+ ..+...|+.+|...+.+++.
T Consensus 108 ~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~---------------------~~~~~~Y~~sK~a~~~l~~~ 166 (256)
T PRK12743 108 FTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTP---------------------LPGASAYTAAKHALGGLTKA 166 (256)
T ss_pred HHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCC---------------------CCCcchhHHHHHHHHHHHHH
Confidence 5789999999999886532 258999999522111 02356799999999999888
Q ss_pred HHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-eE
Q 026418 77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RY 150 (239)
Q Consensus 77 ~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y 150 (239)
++.+ .+++++.++|+.+.++..... . .........+.+ . ..+.+.+|++.++.+++.... ..| ++
T Consensus 167 la~~~~~~~i~v~~v~Pg~~~t~~~~~~-~--~~~~~~~~~~~~--~----~~~~~~~dva~~~~~l~~~~~~~~~G~~~ 237 (256)
T PRK12743 167 MALELVEHGILVNAVAPGAIATPMNGMD-D--SDVKPDSRPGIP--L----GRPGDTHEIASLVAWLCSEGASYTTGQSL 237 (256)
T ss_pred HHHHhhhhCeEEEEEEeCCccCcccccc-C--hHHHHHHHhcCC--C----CCCCCHHHHHHHHHHHhCccccCcCCcEE
Confidence 7764 479999999999988743211 0 111111111111 1 124578999999998886432 234 44
Q ss_pred EEec
Q 026418 151 LCAE 154 (239)
Q Consensus 151 ~~~~ 154 (239)
.+.|
T Consensus 238 ~~dg 241 (256)
T PRK12743 238 IVDG 241 (256)
T ss_pred EECC
Confidence 4443
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.00 E-value=8.7e-05 Score=58.15 Aligned_cols=129 Identities=13% Similarity=0.042 Sum_probs=78.2
Q ss_pred chhHhHHHHHHHHHHHhcC--CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~--v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++..+++++.+.- -.++++++| +...... .....|+.+|.+.|.+++.++.
T Consensus 117 ~~~N~~~~~~~~~~~~~~~~~~~~iv~~~s-s~~~~~~--------------------~~~~~Y~~sK~a~~~~~~~la~ 175 (257)
T PRK12744 117 FAVNSKSAFFFIKEAGRHLNDNGKIVTLVT-SLLGAFT--------------------PFYSAYAGSKAPVEHFTRAASK 175 (257)
T ss_pred HhhhhhHHHHHHHHHHHhhccCCCEEEEec-chhcccC--------------------CCcccchhhHHHHHHHHHHHHH
Confidence 5789999999999987541 245666533 1222110 1135699999999999999987
Q ss_pred Hc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCC-Cc-eEEEec
Q 026418 80 AR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSA-SG-RYLCAE 154 (239)
Q Consensus 80 ~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~~-~y~~~~ 154 (239)
+. |+++..++|+.+..+...+... ..... .........+.....+.+.+|++.++..++..... .| ++++.+
T Consensus 176 e~~~~~i~v~~v~pg~v~t~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~g~~~~~~g 252 (257)
T PRK12744 176 EFGARGISVTAVGPGPMDTPFFYPQEG--AEAVA-YHKTAAALSPFSKTGLTDIEDIVPFIRFLVTDGWWITGQTILING 252 (257)
T ss_pred HhCcCceEEEEEecCccccchhccccc--cchhh-cccccccccccccCCCCCHHHHHHHHHHhhcccceeecceEeecC
Confidence 64 6999999999997664221111 00000 00000000111123588999999999999974311 23 665553
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.99 E-value=0.00029 Score=55.22 Aligned_cols=130 Identities=12% Similarity=0.074 Sum_probs=78.0
Q ss_pred chhHhHHHHHHHHHH----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++.+++ ++.+..++|++||. ..+.. .. .+...|+.+|...+.+++.+
T Consensus 107 ~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~-~~~~~--------~~-----------~~~~~Y~~sK~a~~~l~~~~ 166 (260)
T PRK06523 107 LNLNLLAAVRLDRALLPGMIARGSGVIIHVTSI-QRRLP--------LP-----------ESTTAYAAAKAALSTYSKSL 166 (260)
T ss_pred HhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecc-cccCC--------CC-----------CCcchhHHHHHHHHHHHHHH
Confidence 568999987776655 44455789999995 43311 00 12567999999999998888
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCC--------hhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVN--------ASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP-- 144 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~-- 144 (239)
+.. .|+++.+++|+.+..+....... ........+.+... ..+ ...+...+|+++++.+++...
T Consensus 167 a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p--~~~~~~~~~va~~~~~l~s~~~~ 243 (260)
T PRK06523 167 SKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLG-GIP--LGRPAEPEEVAELIAFLASDRAA 243 (260)
T ss_pred HHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhc-cCc--cCCCCCHHHHHHHHHHHhCcccc
Confidence 765 47999999999998764211000 00000111111000 001 123557899999999988643
Q ss_pred CCCc-eEEEec
Q 026418 145 SASG-RYLCAE 154 (239)
Q Consensus 145 ~~~~-~y~~~~ 154 (239)
...| .+.+.|
T Consensus 244 ~~~G~~~~vdg 254 (260)
T PRK06523 244 SITGTEYVIDG 254 (260)
T ss_pred cccCceEEecC
Confidence 2223 565553
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.99 E-value=0.00014 Score=56.85 Aligned_cols=115 Identities=14% Similarity=0.146 Sum_probs=74.4
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..+++++. +.+..++|++||.++..+... .+...|+.+|...+.+++.+
T Consensus 114 ~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-------------------~~~~~Y~~sKaa~~~l~~~l 174 (254)
T PRK06114 114 MDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRG-------------------LLQAHYNASKAGVIHLSKSL 174 (254)
T ss_pred HhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCC-------------------CCcchHHHHHHHHHHHHHHH
Confidence 5689999977776653 444568999999644332211 11356999999999998888
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
+.+ .|+++.+++|+.+..+...... .......+....+ . .-+...+|++.++++++..
T Consensus 175 a~e~~~~gi~v~~v~PG~i~t~~~~~~~--~~~~~~~~~~~~p----~--~r~~~~~dva~~~~~l~s~ 235 (254)
T PRK06114 175 AMEWVGRGIRVNSISPGYTATPMNTRPE--MVHQTKLFEEQTP----M--QRMAKVDEMVGPAVFLLSD 235 (254)
T ss_pred HHHHhhcCeEEEEEeecCccCccccccc--chHHHHHHHhcCC----C--CCCcCHHHHHHHHHHHcCc
Confidence 764 4899999999999776432111 0111112222111 1 2255789999999998864
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.98 E-value=0.00013 Score=56.44 Aligned_cols=108 Identities=17% Similarity=0.139 Sum_probs=73.6
Q ss_pred chhHhHHHHHHHHHH----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++ .+.+..++|++||. ..++.. .+...|+.+|...+.+.+.+
T Consensus 111 ~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~-~~~~~~--------------------~~~~~Y~~sK~~~~~~~~~~ 169 (241)
T PRK07454 111 IQLNLTSVFQCCSAVLPGMRARGGGLIINVSSI-AARNAF--------------------PQWGAYCVSKAALAAFTKCL 169 (241)
T ss_pred HHhccHHHHHHHHHHHHHHHhcCCcEEEEEccH-HhCcCC--------------------CCccHHHHHHHHHHHHHHHH
Confidence 467888888877665 44456789999995 655321 12467999999999888776
Q ss_pred HH---HcCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC
Q 026418 78 AV---ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS 145 (239)
Q Consensus 78 ~~---~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 145 (239)
++ ..|++++++||+.+-.+...... .. ..+. ....+..+|+|++++.++..+.
T Consensus 170 a~e~~~~gi~v~~i~pg~i~t~~~~~~~------~~-------~~~~--~~~~~~~~~va~~~~~l~~~~~ 225 (241)
T PRK07454 170 AEEERSHGIRVCTITLGAVNTPLWDTET------VQ-------ADFD--RSAMLSPEQVAQTILHLAQLPP 225 (241)
T ss_pred HHHhhhhCCEEEEEecCcccCCcccccc------cc-------cccc--cccCCCHHHHHHHHHHHHcCCc
Confidence 54 34899999999998765321100 00 0000 1235789999999999997663
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.98 E-value=0.00012 Score=58.03 Aligned_cols=127 Identities=15% Similarity=0.109 Sum_probs=76.8
Q ss_pred chhHhHHHHHHHHHHHh---cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE---AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA 78 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~---~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~ 78 (239)
+++|+.++.++++++.. .+..++|++||.++.++. .....|+.+|...+.+.+.++
T Consensus 100 ~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~~sK~al~~~~~~l~ 158 (274)
T PRK05693 100 FETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVT---------------------PFAGAYCASKAAVHALSDALR 158 (274)
T ss_pred HHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCC---------------------CCccHHHHHHHHHHHHHHHHH
Confidence 57899999999988743 234679999996333321 124679999999999887776
Q ss_pred HH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccC----------CCCCCceehHHHHHHHHHhhcCCC
Q 026418 79 VA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYA----------NSVQAYVHVRDVALAHILVYETPS 145 (239)
Q Consensus 79 ~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~i~v~D~a~~~~~~~~~~~ 145 (239)
.+ .|++++.++|+.+..+....... ..........+.++ .........+|+|+.++.++.++.
T Consensus 159 ~e~~~~gi~v~~v~pg~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~~~~~ 234 (274)
T PRK05693 159 LELAPFGVQVMEVQPGAIASQFASNASR----EAEQLLAEQSPWWPLREHIQARARASQDNPTPAAEFARQLLAAVQQSP 234 (274)
T ss_pred HHhhhhCeEEEEEecCcccccccccccc----chhhcCCCCCccHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHhCCC
Confidence 54 58999999999997653221100 00000000000000 000123467899999998887655
Q ss_pred CCceEEEe
Q 026418 146 ASGRYLCA 153 (239)
Q Consensus 146 ~~~~y~~~ 153 (239)
....+..+
T Consensus 235 ~~~~~~~g 242 (274)
T PRK05693 235 RPRLVRLG 242 (274)
T ss_pred CCceEEec
Confidence 43444333
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.97 E-value=3.3e-05 Score=60.04 Aligned_cols=132 Identities=16% Similarity=0.108 Sum_probs=79.7
Q ss_pred CchhHhHHHHHHHHHHHhc--CCCEEEEccchhhhccCCCCCCCccccCC----CCCCh------hhcccCCchHHHHHH
Q 026418 1 MVEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDES----CWSDL------EFCKNTKNWYCYGKA 68 (239)
Q Consensus 1 ~~~~Nv~~t~~ll~a~~~~--~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~----~~~~~------~~~~~~~~~Y~~sK~ 68 (239)
++++|+.++..+++++.+. .-.++|++||. +.|+..... +..|. ..... ..+..+...|+.+|.
T Consensus 67 ~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 142 (241)
T PRK12428 67 VARVNFLGLRHLTEALLPRMAPGGAIVNVASL-AGAEWPQRL---ELHKALAATASFDEGAAWLAAHPVALATGYQLSKE 142 (241)
T ss_pred hhhhchHHHHHHHHHHHHhccCCcEEEEeCcH-Hhhccccch---HHHHhhhccchHHHHHHhhhccCCCcccHHHHHHH
Confidence 3678999999999999764 23689999995 666532211 11111 00000 001234578999999
Q ss_pred HHHHHHHHHH----HHcCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 69 VAEKAAWEEA----VARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 69 ~~E~~~~~~~----~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
..+.+.+.++ ...|+++..++||.+.++....... ..-........ .+ ...+...+|+|+++.+++..
T Consensus 143 a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~---~~~~~~~~~~~--~~--~~~~~~pe~va~~~~~l~s~ 214 (241)
T PRK12428 143 ALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRS---MLGQERVDSDA--KR--MGRPATADEQAAVLVFLCSD 214 (241)
T ss_pred HHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchh---hhhhHhhhhcc--cc--cCCCCCHHHHHHHHHHHcCh
Confidence 9999888777 3458999999999998764221100 00000000000 01 12256789999999998753
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.97 E-value=0.00036 Score=54.55 Aligned_cols=124 Identities=17% Similarity=0.145 Sum_probs=80.5
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++. +.+..++|++||. +.... ..+...|+.+|.+.+.+++.+
T Consensus 115 ~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~-~~~~~--------------------~~~~~~Y~~sK~a~~~~~~~l 173 (255)
T PRK06113 115 YELNVFSFFHLSQLVAPEMEKNGGGVILTITSM-AAENK--------------------NINMTSYASSKAAASHLVRNM 173 (255)
T ss_pred HHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecc-cccCC--------------------CCCcchhHHHHHHHHHHHHHH
Confidence 5789999999999986 3344589999996 32210 012467999999999999988
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-eEE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL 151 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~ 151 (239)
+.+ .++++.++.|+.+.-+...... .......+.+..+ ...+...+|+++++++++.... ..| +++
T Consensus 174 a~~~~~~~i~v~~v~pg~~~t~~~~~~~--~~~~~~~~~~~~~------~~~~~~~~d~a~~~~~l~~~~~~~~~G~~i~ 245 (255)
T PRK06113 174 AFDLGEKNIRVNGIAPGAILTDALKSVI--TPEIEQKMLQHTP------IRRLGQPQDIANAALFLCSPAASWVSGQILT 245 (255)
T ss_pred HHHhhhhCeEEEEEeccccccccccccc--CHHHHHHHHhcCC------CCCCcCHHHHHHHHHHHcCccccCccCCEEE
Confidence 754 4789999999988655322110 1112222222211 1235688999999999986432 234 555
Q ss_pred Eec
Q 026418 152 CAE 154 (239)
Q Consensus 152 ~~~ 154 (239)
+.|
T Consensus 246 ~~g 248 (255)
T PRK06113 246 VSG 248 (255)
T ss_pred ECC
Confidence 553
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.97 E-value=0.00014 Score=56.63 Aligned_cols=103 Identities=18% Similarity=0.124 Sum_probs=74.0
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++. +.+..++|++||.+++++.+ .+...|+.+|...+.+++.+
T Consensus 109 ~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--------------------~~~~~Y~~sK~a~~~~~~~l 168 (248)
T PRK08251 109 AETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLP--------------------GVKAAYAASKAGVASLGEGL 168 (248)
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCC--------------------CCcccHHHHHHHHHHHHHHH
Confidence 4689999998888874 44677999999964444321 12467999999999888887
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
..+ .+++++.++|+.+.++.... .. . ....+..+|+|++++.++++.
T Consensus 169 ~~~~~~~~i~v~~v~pg~v~t~~~~~------------~~-~-------~~~~~~~~~~a~~i~~~~~~~ 218 (248)
T PRK08251 169 RAELAKTPIKVSTIEPGYIRSEMNAK------------AK-S-------TPFMVDTETGVKALVKAIEKE 218 (248)
T ss_pred HHHhcccCcEEEEEecCcCcchhhhc------------cc-c-------CCccCCHHHHHHHHHHHHhcC
Confidence 754 37899999999997653110 00 0 123577899999999999753
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.00012 Score=56.97 Aligned_cols=115 Identities=18% Similarity=0.134 Sum_probs=73.8
Q ss_pred chhHhHHHHHHHHHHHhc-CC------CEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA-KV------RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAA 74 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~-~v------~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~ 74 (239)
+++|+.++..+++++.+. .. .++|++||.++.++... ....|+.+|...+.++
T Consensus 109 ~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~--------------------~~~~Y~~sK~~~~~~~ 168 (248)
T PRK06947 109 FDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPN--------------------EYVDYAGSKGAVDTLT 168 (248)
T ss_pred HHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCC--------------------CCcccHhhHHHHHHHH
Confidence 568999998887654432 11 36999999655543211 1245999999999998
Q ss_pred HHHHHHc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 75 WEEAVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 75 ~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
+.++++. +++++++||+.+..+....... ....... .... + ..-....+|+++.++.++..+
T Consensus 169 ~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~--~~~~~~~-~~~~---~--~~~~~~~e~va~~~~~l~~~~ 233 (248)
T PRK06947 169 LGLAKELGPHGVRVNAVRPGLIETEIHASGGQ--PGRAARL-GAQT---P--LGRAGEADEVAETIVWLLSDA 233 (248)
T ss_pred HHHHHHhhhhCcEEEEEeccCcccccccccCC--HHHHHHH-hhcC---C--CCCCcCHHHHHHHHHHHcCcc
Confidence 8887654 7999999999998764321111 1111111 1111 1 111456899999999988765
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.00011 Score=57.44 Aligned_cols=102 Identities=18% Similarity=0.053 Sum_probs=69.5
Q ss_pred chhHhHHHHH----HHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKN----VIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~----ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.. ++.++.+.+..++|++||. ..+.. . .+...|+.||.....+.+.+
T Consensus 115 ~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~-~g~~~---~-----------------~~~~~Y~~sKaa~~~~~~~l 173 (253)
T PRK07904 115 AEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSV-AGERV---R-----------------RSNFVYGSTKAGLDGFYLGL 173 (253)
T ss_pred HHHHhHhHHHHHHHHHHHHHhcCCceEEEEech-hhcCC---C-----------------CCCcchHHHHHHHHHHHHHH
Confidence 5678887766 5677777777899999996 32210 0 12356999999998665554
Q ss_pred H---HHcCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 78 A---VARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 78 ~---~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
. +..++++++++|+.+..+... . .. .. ...+..+|+|+.++.++.+.
T Consensus 174 ~~el~~~~i~v~~v~Pg~v~t~~~~-----------~-~~-~~-------~~~~~~~~~A~~i~~~~~~~ 223 (253)
T PRK07904 174 GEALREYGVRVLVVRPGQVRTRMSA-----------H-AK-EA-------PLTVDKEDVAKLAVTAVAKG 223 (253)
T ss_pred HHHHhhcCCEEEEEeeCceecchhc-----------c-CC-CC-------CCCCCHHHHHHHHHHHHHcC
Confidence 3 346899999999999754211 0 00 00 11367899999999999755
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.00035 Score=54.67 Aligned_cols=119 Identities=14% Similarity=-0.013 Sum_probs=77.0
Q ss_pred chhHhHHHHHHHHHHHhc----CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..+++++.+. +..++|++||. ..+... .....|+.+|.+.+.+++.+
T Consensus 123 ~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~-~~~~~~--------------------~~~~~Y~~sK~a~~~~~~~l 181 (256)
T PRK12748 123 YAVNVRATMLLSSAFAKQYDGKAGGRIINLTSG-QSLGPM--------------------PDELAYAATKGAIEAFTKSL 181 (256)
T ss_pred HHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCc-cccCCC--------------------CCchHHHHHHHHHHHHHHHH
Confidence 578999999999998643 34689999995 544211 12356999999999998887
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-eEE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL 151 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~ 151 (239)
+.. .+++++.++|+.+..+.... .......... +. ..+...+|+++++.+++.... ..| +++
T Consensus 182 a~e~~~~~i~v~~i~Pg~~~t~~~~~------~~~~~~~~~~----~~--~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~ 249 (256)
T PRK12748 182 APELAEKGITVNAVNPGPTDTGWITE------ELKHHLVPKF----PQ--GRVGEPVDAARLIAFLVSEEAKWITGQVIH 249 (256)
T ss_pred HHHHHHhCeEEEEEEeCcccCCCCCh------hHHHhhhccC----CC--CCCcCHHHHHHHHHHHhCcccccccCCEEE
Confidence 654 48999999999876543211 1111111111 11 123456899999998886432 234 555
Q ss_pred Ee
Q 026418 152 CA 153 (239)
Q Consensus 152 ~~ 153 (239)
+.
T Consensus 250 ~d 251 (256)
T PRK12748 250 SE 251 (256)
T ss_pred ec
Confidence 54
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.00024 Score=55.98 Aligned_cols=115 Identities=10% Similarity=0.001 Sum_probs=75.6
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..+++++.. .+..++|++||..+.++. .+...|+.+|...+.+++.+
T Consensus 115 ~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~~sKaal~~l~~~l 173 (265)
T PRK07097 115 IDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGR---------------------ETVSAYAAAKGGLKMLTKNI 173 (265)
T ss_pred HHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCC---------------------CCCccHHHHHHHHHHHHHHH
Confidence 56899988877777643 456789999996444321 12467999999999999998
Q ss_pred HHHc---CccEEEEecCcccCCCCCCCCC-----hhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 78 AVAR---GVDLVVVNPVLVLGPLLQSTVN-----ASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
+++. |+++..++|+.+..+....... ........+....+ ...+...+|+|..+..++..
T Consensus 174 a~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~dva~~~~~l~~~ 241 (265)
T PRK07097 174 ASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTP------AARWGDPEDLAGPAVFLASD 241 (265)
T ss_pred HHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCC------ccCCcCHHHHHHHHHHHhCc
Confidence 7764 8999999999998764321100 00001111111111 12356789999999999875
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.00032 Score=54.92 Aligned_cols=114 Identities=15% Similarity=0.118 Sum_probs=76.6
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++. +.+..++|++||. +.+... .+...|+.+|...+.+++.+
T Consensus 116 ~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~-~~~~~~--------------------~~~~~Y~~sK~a~~~~~~~l 174 (257)
T PRK09242 116 FETNLFSAFELSRYAHPLLKQHASSAIVNIGSV-SGLTHV--------------------RSGAPYGMTKAALLQMTRNL 174 (257)
T ss_pred HhhhhHHHHHHHHHHHHHHHhcCCceEEEECcc-ccCCCC--------------------CCCcchHHHHHHHHHHHHHH
Confidence 5789999999988875 3445789999995 433211 12466999999999999887
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
+.+ .++++..++|+.+.++....... ............+ ..-+...+|++.++..++..
T Consensus 175 a~e~~~~~i~v~~i~Pg~i~t~~~~~~~~-~~~~~~~~~~~~~------~~~~~~~~~va~~~~~l~~~ 236 (257)
T PRK09242 175 AVEWAEDGIRVNAVAPWYIRTPLTSGPLS-DPDYYEQVIERTP------MRRVGEPEEVAAAVAFLCMP 236 (257)
T ss_pred HHHHHHhCeEEEEEEECCCCCcccccccC-ChHHHHHHHhcCC------CCCCcCHHHHHHHHHHHhCc
Confidence 654 48999999999998775332111 1122222222221 12244578999999998864
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.00018 Score=55.83 Aligned_cols=103 Identities=17% Similarity=0.087 Sum_probs=72.9
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++.. .+..++|++||..+.++. .....|+.+|...+.+.+.+
T Consensus 104 ~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~l 162 (243)
T PRK07102 104 FRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGR---------------------ASNYVYGSAKAALTAFLSGL 162 (243)
T ss_pred HHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCC---------------------CCCcccHHHHHHHHHHHHHH
Confidence 56899999999988754 456789999995332211 12356999999999988887
Q ss_pred HH---HcCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 78 AV---ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 78 ~~---~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
+. ..|+++..++|+.+.++.... .. .+ ..-....+|+++.+..++.+.
T Consensus 163 ~~el~~~gi~v~~v~pg~v~t~~~~~---------------~~--~~--~~~~~~~~~~a~~i~~~~~~~ 213 (243)
T PRK07102 163 RNRLFKSGVHVLTVKPGFVRTPMTAG---------------LK--LP--GPLTAQPEEVAKDIFRAIEKG 213 (243)
T ss_pred HHHhhccCcEEEEEecCcccChhhhc---------------cC--CC--ccccCCHHHHHHHHHHHHhCC
Confidence 54 348999999999998763110 00 01 122466899999999988854
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.00029 Score=57.53 Aligned_cols=110 Identities=17% Similarity=0.150 Sum_probs=70.9
Q ss_pred chhHhHHHHH----HHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKN----VIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~----ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.+ ++..+++.+..++|++||. ..+... .....|+.+|...+.+.+.+
T Consensus 113 ~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~-~~~~~~--------------------~~~~~Y~asK~a~~~~~~~l 171 (334)
T PRK07109 113 TEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSA-LAYRSI--------------------PLQSAYCAAKHAIRGFTDSL 171 (334)
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCCh-hhccCC--------------------CcchHHHHHHHHHHHHHHHH
Confidence 4667666555 5555555556789999996 544221 12467999999998888776
Q ss_pred HHH-----cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 78 AVA-----RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 78 ~~~-----~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
+.+ .++++++++|+.+-.+... ......... ......+...+|+|++++.++.++
T Consensus 172 ~~el~~~~~~I~v~~v~Pg~v~T~~~~--------~~~~~~~~~----~~~~~~~~~pe~vA~~i~~~~~~~ 231 (334)
T PRK07109 172 RCELLHDGSPVSVTMVQPPAVNTPQFD--------WARSRLPVE----PQPVPPIYQPEVVADAILYAAEHP 231 (334)
T ss_pred HHHHhhcCCCeEEEEEeCCCccCchhh--------hhhhhcccc----ccCCCCCCCHHHHHHHHHHHHhCC
Confidence 544 3689999999998655211 111111111 111234678999999999999865
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.00025 Score=61.46 Aligned_cols=126 Identities=17% Similarity=0.134 Sum_probs=81.2
Q ss_pred chhHhHHHHHHHHHHHhc--CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~--~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++.++++++... +-.++|++||.++..+. .+...|+.+|...+.+.+.++.
T Consensus 372 ~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asKaal~~l~~~la~ 430 (520)
T PRK06484 372 YDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLAL---------------------PPRNAYCASKAAVTMLSRSLAC 430 (520)
T ss_pred HHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCC---------------------CCCchhHHHHHHHHHHHHHHHH
Confidence 678999999999988763 23689999996333211 1246799999999999988876
Q ss_pred Hc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-eEEEe
Q 026418 80 AR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYLCA 153 (239)
Q Consensus 80 ~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~ 153 (239)
+. |+++..+.|+.+..+...............+.+..+ ...+...+|+|+++++++.... ..| ++.+.
T Consensus 431 e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~dia~~~~~l~s~~~~~~~G~~i~vd 504 (520)
T PRK06484 431 EWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIP------LGRLGDPEEVAEAIAFLASPAASYVNGATLTVD 504 (520)
T ss_pred HhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCC------CCCCcCHHHHHHHHHHHhCccccCccCcEEEEC
Confidence 53 799999999999776321100000111122222211 1235678999999999886432 234 45554
Q ss_pred c
Q 026418 154 E 154 (239)
Q Consensus 154 ~ 154 (239)
|
T Consensus 505 g 505 (520)
T PRK06484 505 G 505 (520)
T ss_pred C
Confidence 3
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00036 Score=54.51 Aligned_cols=114 Identities=18% Similarity=0.021 Sum_probs=74.5
Q ss_pred chhHhHHHHHHHHHHHh----c-CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----A-KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~-~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++.++++++.+ . +..++|++||. ..+... .....|+.+|...+.+++.
T Consensus 103 ~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~-~~~~~~--------------------~~~~~Y~~sK~a~~~l~~~ 161 (252)
T PRK07856 103 VELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSV-SGRRPS--------------------PGTAAYGAAKAGLLNLTRS 161 (252)
T ss_pred HHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccc-ccCCCC--------------------CCCchhHHHHHHHHHHHHH
Confidence 57899999999998864 1 34689999996 322110 1246799999999999999
Q ss_pred HHHHc--CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 77 EAVAR--GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 77 ~~~~~--~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
++.+. .+++..++|+.+..+....... .......+....+ ...+...+|+++++++++..
T Consensus 162 la~e~~~~i~v~~i~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~------~~~~~~p~~va~~~~~L~~~ 223 (252)
T PRK07856 162 LAVEWAPKVRVNAVVVGLVRTEQSELHYG-DAEGIAAVAATVP------LGRLATPADIAWACLFLASD 223 (252)
T ss_pred HHHHhcCCeEEEEEEeccccChHHhhhcc-CHHHHHHHhhcCC------CCCCcCHHHHHHHHHHHcCc
Confidence 88764 3788889999887653211100 0111112222111 12356789999999998864
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00093 Score=52.66 Aligned_cols=106 Identities=19% Similarity=0.115 Sum_probs=77.7
Q ss_pred CchHHHHHHHHHHHHHHHHHHcCccEEEEecCcccCCCCCCCCChhHHHHHHHHc-CCCCc-cCCCCCCceehHHHHHHH
Q 026418 60 KNWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLN-GSAKT-YANSVQAYVHVRDVALAH 137 (239)
Q Consensus 60 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~i~v~D~a~~~ 137 (239)
...|..+|..+|.++.. .|++++++|+..+|..... ..+..... +.+.. .+.+....+.++|++.++
T Consensus 115 ~~~~~~~~~~~e~~l~~----sg~~~t~lr~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~i~~~d~a~~~ 183 (275)
T COG0702 115 PSALARAKAAVEAALRS----SGIPYTTLRRAAFYLGAGA-------AFIEAAEAAGLPVIPRGIGRLSPIAVDDVAEAL 183 (275)
T ss_pred ccHHHHHHHHHHHHHHh----cCCCeEEEecCeeeeccch-------hHHHHHHhhCCceecCCCCceeeeEHHHHHHHH
Confidence 46799999999999854 4899999998777654321 11333333 33322 355578899999999999
Q ss_pred HHhhcCCCCCc-eEEEe-cCCCCHHHHHHHHHHhCCCCCCCC
Q 026418 138 ILVYETPSASG-RYLCA-ESVLHRGEVVEILAKFFPEYPIPT 177 (239)
Q Consensus 138 ~~~~~~~~~~~-~y~~~-~~~~s~~el~~~i~~~~~~~~~~~ 177 (239)
..++..+...+ +|.+. .+..+..++++.+.+.. +.+...
T Consensus 184 ~~~l~~~~~~~~~~~l~g~~~~~~~~~~~~l~~~~-gr~~~~ 224 (275)
T COG0702 184 AAALDAPATAGRTYELAGPEALTLAELASGLDYTI-GRPVGL 224 (275)
T ss_pred HHHhcCCcccCcEEEccCCceecHHHHHHHHHHHh-CCccee
Confidence 99998775555 88777 56899999999999996 554433
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.0004 Score=54.60 Aligned_cols=114 Identities=16% Similarity=0.092 Sum_probs=75.3
Q ss_pred chhHhHHHHHHHHHHHh-----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE-----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~-----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++.++++++.+ .+..++|++||.++.++. .+...|+.+|...+.+++.
T Consensus 115 ~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~ 173 (263)
T PRK07814 115 FTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAG---------------------RGFAAYGTAKAALAHYTRL 173 (263)
T ss_pred HHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCC---------------------CCCchhHHHHHHHHHHHHH
Confidence 57899999999999974 345789999996333211 1356799999999999998
Q ss_pred HHHHc--CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 77 EAVAR--GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 77 ~~~~~--~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
++.+. ++++..++|+.+..+..... ... ..+.....+.. ....+...+|+++++++++..
T Consensus 174 ~~~e~~~~i~v~~i~Pg~v~t~~~~~~-~~~-~~~~~~~~~~~-----~~~~~~~~~~va~~~~~l~~~ 235 (263)
T PRK07814 174 AALDLCPRIRVNAIAPGSILTSALEVV-AAN-DELRAPMEKAT-----PLRRLGDPEDIAAAAVYLASP 235 (263)
T ss_pred HHHHHCCCceEEEEEeCCCcCchhhhc-cCC-HHHHHHHHhcC-----CCCCCcCHHHHHHHHHHHcCc
Confidence 87754 46888899988865421110 000 11122222211 112356789999999998864
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.00023 Score=55.85 Aligned_cols=111 Identities=24% Similarity=0.191 Sum_probs=73.9
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++.+ .+..++|++||.+++++.. ....|+.+|...+.+.+.+
T Consensus 105 ~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~---------------------~~~~Y~~sKaa~~~~~~~l 163 (260)
T PRK08267 105 IDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQP---------------------GLAVYSATKFAVRGLTEAL 163 (260)
T ss_pred HHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCC---------------------CchhhHHHHHHHHHHHHHH
Confidence 57899999999888753 3457899999965555421 1457999999999988887
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
+.+ .++++..++|+.+-.+....... ......... ....+..+|++++++.++...
T Consensus 164 ~~~~~~~~i~v~~i~pg~~~t~~~~~~~~---~~~~~~~~~--------~~~~~~~~~va~~~~~~~~~~ 222 (260)
T PRK08267 164 DLEWRRHGIRVADVMPLFVDTAMLDGTSN---EVDAGSTKR--------LGVRLTPEDVAEAVWAAVQHP 222 (260)
T ss_pred HHHhcccCcEEEEEecCCcCCcccccccc---hhhhhhHhh--------ccCCCCHHHHHHHHHHHHhCC
Confidence 654 47999999999986543221000 000011110 011355699999999998644
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.00033 Score=54.87 Aligned_cols=116 Identities=14% Similarity=0.020 Sum_probs=76.0
Q ss_pred chhHhHHHHHHHHHHHhc----C-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----K-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++.++++++.+. + ..++|++||. +.++.. .....|+.+|...|.+++.
T Consensus 112 ~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~-~~~~~~--------------------~~~~~Y~~sK~a~~~~~~~ 170 (260)
T PRK06198 112 FAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSM-SAHGGQ--------------------PFLAAYCASKGALATLTRN 170 (260)
T ss_pred HHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCc-ccccCC--------------------CCcchhHHHHHHHHHHHHH
Confidence 578999999998887542 2 3579999995 544311 1246799999999999988
Q ss_pred HHHH---cCccEEEEecCcccCCCCCC---CC-ChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 77 EAVA---RGVDLVVVNPVLVLGPLLQS---TV-NASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 77 ~~~~---~~~~~~i~Rp~~v~G~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
++.. .+++++.++|+.+.++.... .. .....++....... ....+++.+|+++++.+++...
T Consensus 171 ~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~a~~~~~l~~~~ 239 (260)
T PRK06198 171 AAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQ------PFGRLLDPDEVARAVAFLLSDE 239 (260)
T ss_pred HHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccC------CccCCcCHHHHHHHHHHHcChh
Confidence 7654 36899999999998874211 00 00011111111111 1234678999999999988644
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.00041 Score=54.52 Aligned_cols=117 Identities=13% Similarity=0.091 Sum_probs=73.8
Q ss_pred chhHhHHHHHHHHHHHh---cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE---AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA 78 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~---~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~ 78 (239)
+++|+.++..+++++.. .+-.++|++||.++.++.. ....|+.+|...+.+.+.++
T Consensus 107 ~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~---------------------~~~~Y~asKaa~~~~~~~la 165 (261)
T PRK08265 107 LDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQT---------------------GRWLYPASKAAIRQLTRSMA 165 (261)
T ss_pred HhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCC---------------------CCchhHHHHHHHHHHHHHHH
Confidence 56899999999887754 2246899999964443221 14569999999999998887
Q ss_pred HH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 79 VA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 79 ~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
.+ .|+++..++|+.+..+.................... .+ ...+...+|+|+++.+++...
T Consensus 166 ~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~---~p--~~r~~~p~dva~~~~~l~s~~ 229 (261)
T PRK08265 166 MDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPF---HL--LGRVGDPEEVAQVVAFLCSDA 229 (261)
T ss_pred HHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhccc---CC--CCCccCHHHHHHHHHHHcCcc
Confidence 65 379999999998865431110000000111111100 01 122567899999999998643
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.00031 Score=54.22 Aligned_cols=105 Identities=16% Similarity=0.046 Sum_probs=72.6
Q ss_pred chhHhHHHHHHHHHHHhc---CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA---KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA 78 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~---~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~ 78 (239)
+++|+.++.++++++.+. +..++|++||. +.+... .....|+.+|...+.+.+.++
T Consensus 110 ~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~-~~~~~~--------------------~~~~~y~~sk~a~~~~~~~~~ 168 (237)
T PRK07326 110 IDTNLTGAFYTIKAAVPALKRGGGYIINISSL-AGTNFF--------------------AGGAAYNASKFGLVGFSEAAM 168 (237)
T ss_pred HhhccHHHHHHHHHHHHHHHHCCeEEEEECCh-hhccCC--------------------CCCchHHHHHHHHHHHHHHHH
Confidence 567999999998888642 45689999995 433111 124569999999988887765
Q ss_pred HH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC
Q 026418 79 VA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS 145 (239)
Q Consensus 79 ~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 145 (239)
.. .|++++++||+.+..+...... ... ....+..+|++++++.++..+.
T Consensus 169 ~~~~~~gi~v~~v~pg~~~t~~~~~~~------------~~~------~~~~~~~~d~a~~~~~~l~~~~ 220 (237)
T PRK07326 169 LDLRQYGIKVSTIMPGSVATHFNGHTP------------SEK------DAWKIQPEDIAQLVLDLLKMPP 220 (237)
T ss_pred HHhcccCcEEEEEeeccccCccccccc------------chh------hhccCCHHHHHHHHHHHHhCCc
Confidence 33 5899999999998765321110 000 0113678999999999997664
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00045 Score=53.45 Aligned_cols=104 Identities=13% Similarity=-0.000 Sum_probs=72.1
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++.+ .+..++|++||. ... .+ ......|+.+|...+.+++.+
T Consensus 116 ~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~-~~~--~~------------------~~~~~~Y~~sKaa~~~~~~~l 174 (239)
T PRK08703 116 YRINTVAPMGLTRALFPLLKQSPDASVIFVGES-HGE--TP------------------KAYWGGFGASKAALNYLCKVA 174 (239)
T ss_pred HHHhhhHHHHHHHHHHHHHHhCCCCEEEEEecc-ccc--cC------------------CCCccchHHhHHHHHHHHHHH
Confidence 57899999888888754 345689999984 211 00 012456999999999999888
Q ss_pred HHHc----CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 78 AVAR----GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 78 ~~~~----~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
+.+. ++++.+++||.+.++..... ..+. ........+|++.++..++..
T Consensus 175 a~e~~~~~~i~v~~v~pG~v~t~~~~~~-----------~~~~------~~~~~~~~~~~~~~~~~~~~~ 227 (239)
T PRK08703 175 ADEWERFGNLRANVLVPGPINSPQRIKS-----------HPGE------AKSERKSYGDVLPAFVWWASA 227 (239)
T ss_pred HHHhccCCCeEEEEEecCcccCcccccc-----------CCCC------CccccCCHHHHHHHHHHHhCc
Confidence 7764 58999999999988742110 0111 012345788999999998863
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00047 Score=54.52 Aligned_cols=114 Identities=18% Similarity=0.112 Sum_probs=72.0
Q ss_pred chhHhHHHHHHHHHHHh----c-CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----A-KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~-~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++.++++++.. . ...++|++||..+..+. .....|+.+|...+.+.+.
T Consensus 106 ~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~ 164 (272)
T PRK07832 106 VDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVAL---------------------PWHAAYSASKFGLRGLSEV 164 (272)
T ss_pred HHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCC---------------------CCCcchHHHHHHHHHHHHH
Confidence 57899999999999742 2 24689999995222110 1245699999987777666
Q ss_pred HHH---HcCccEEEEecCcccCCCCCCCC----ChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 77 EAV---ARGVDLVVVNPVLVLGPLLQSTV----NASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 77 ~~~---~~~~~~~i~Rp~~v~G~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
.+. ..++++++++||.+.++...... ............. .....+..+|+|++++.++.+
T Consensus 165 l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~vA~~~~~~~~~ 231 (272)
T PRK07832 165 LRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDR-------FRGHAVTPEKAAEKILAGVEK 231 (272)
T ss_pred HHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHHh-------cccCCCCHHHHHHHHHHHHhc
Confidence 553 35899999999999876432110 0000001111100 012357899999999999963
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00059 Score=52.74 Aligned_cols=113 Identities=14% Similarity=0.075 Sum_probs=72.2
Q ss_pred chhHhHHHHHHHH----HHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIV----AAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~----a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..+++ .+++.+..++|++||..+..+. .....|+.+|...+.+++.+
T Consensus 106 ~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~---------------------~~~~~y~~sk~a~~~~~~~l 164 (242)
T TIGR01829 106 IDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQ---------------------FGQTNYSAAKAGMIGFTKAL 164 (242)
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCC---------------------CCcchhHHHHHHHHHHHHHH
Confidence 4678888777544 4456667899999995222211 12456999999888888777
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
+++ .++++.+++|+.+.++..... ....+..+..+.+ ...+...+|+++++.+++..+
T Consensus 165 a~~~~~~~i~v~~i~pg~~~t~~~~~~---~~~~~~~~~~~~~------~~~~~~~~~~a~~~~~l~~~~ 225 (242)
T TIGR01829 165 AQEGATKGVTVNTISPGYIATDMVMAM---REDVLNSIVAQIP------VGRLGRPEEIAAAVAFLASEE 225 (242)
T ss_pred HHHhhhhCeEEEEEeeCCCcCcccccc---chHHHHHHHhcCC------CCCCcCHHHHHHHHHHHcCch
Confidence 554 489999999999987653211 1122223332221 122455689999998877543
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00047 Score=54.14 Aligned_cols=116 Identities=18% Similarity=0.172 Sum_probs=75.2
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++.+ .+..++|++||..+.... . .....|+.+|...+.+++.+
T Consensus 110 ~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~---------~-----------~~~~~Y~~sK~a~~~~~~~l 169 (263)
T PRK08226 110 IDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVA---------D-----------PGETAYALTKAAIVGLTKSL 169 (263)
T ss_pred HhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccC---------C-----------CCcchHHHHHHHHHHHHHHH
Confidence 57899999999988754 345689999995221100 0 12456999999999999888
Q ss_pred HHHc---CccEEEEecCcccCCCCCCC-----CChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 78 AVAR---GVDLVVVNPVLVLGPLLQST-----VNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
+... ++++..++|+.+.++..... .......+..+..+.+ ...+...+|+++++..++..
T Consensus 170 a~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p------~~~~~~~~~va~~~~~l~~~ 237 (263)
T PRK08226 170 AVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIP------LRRLADPLEVGELAAFLASD 237 (263)
T ss_pred HHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCC------CCCCCCHHHHHHHHHHHcCc
Confidence 7653 79999999999987632110 0001112223322221 12356889999999888753
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00056 Score=54.22 Aligned_cols=115 Identities=13% Similarity=0.088 Sum_probs=74.2
Q ss_pred chhHhHHHHHHHHHH----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..+++++ ++.+..++|++||. +.+... .+...|+.+|...+.+++.+
T Consensus 130 ~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~-~~~~~~--------------------~~~~~Y~~sK~a~~~l~~~l 188 (278)
T PRK08277 130 FDLNLLGTLLPTQVFAKDMVGRKGGNIINISSM-NAFTPL--------------------TKVPAYSAAKAAISNFTQWL 188 (278)
T ss_pred HhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccc-hhcCCC--------------------CCCchhHHHHHHHHHHHHHH
Confidence 567888887665554 44445789999996 544211 12456999999999999988
Q ss_pred HHHc---CccEEEEecCcccCCCCCCCC----ChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 78 AVAR---GVDLVVVNPVLVLGPLLQSTV----NASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
+.+. |+++..++|+.+..+...... .........+....+ ...+...+|+|+++++++..
T Consensus 189 a~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~p------~~r~~~~~dva~~~~~l~s~ 255 (278)
T PRK08277 189 AVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTP------MGRFGKPEELLGTLLWLADE 255 (278)
T ss_pred HHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccCC------ccCCCCHHHHHHHHHHHcCc
Confidence 7764 799999999999877421100 000011111111111 12356789999999998865
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00029 Score=54.41 Aligned_cols=109 Identities=17% Similarity=0.110 Sum_probs=71.9
Q ss_pred chhHhHHHHHHHHHHHhc--CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~--~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
++.|+.+...+++++.+. .-.++|++||.+..++.. .+...|+.+|...+.+++.++.
T Consensus 107 ~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~--------------------~~~~~Y~~sK~~~~~~~~~~~~ 166 (238)
T PRK05786 107 LTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKAS--------------------PDQLSYAVAKAGLAKAVEILAS 166 (238)
T ss_pred HHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccCC--------------------CCchHHHHHHHHHHHHHHHHHH
Confidence 567888888777777653 125799999853322110 1245699999999988888776
Q ss_pred Hc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 80 AR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 80 ~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
.. +++++++||+.++++.... ..+... ......++..+|++++++.++...
T Consensus 167 ~~~~~gi~v~~i~pg~v~~~~~~~------~~~~~~--------~~~~~~~~~~~~va~~~~~~~~~~ 220 (238)
T PRK05786 167 ELLGRGIRVNGIAPTTISGDFEPE------RNWKKL--------RKLGDDMAPPEDFAKVIIWLLTDE 220 (238)
T ss_pred HHhhcCeEEEEEecCccCCCCCch------hhhhhh--------ccccCCCCCHHHHHHHHHHHhccc
Confidence 53 8999999999999874211 011110 001123566789999999998653
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00054 Score=53.44 Aligned_cols=118 Identities=18% Similarity=0.092 Sum_probs=74.1
Q ss_pred chhHhHHHHHHHHHHHh----cC-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++..+++++.+ .+ ..++|++||.++.++.+ ....|+.+|...+.+++.
T Consensus 105 ~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---------------------~~~~Y~~sK~a~~~~~~~ 163 (254)
T TIGR02415 105 YNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNP---------------------ILSAYSSTKFAVRGLTQT 163 (254)
T ss_pred HhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCC---------------------CCcchHHHHHHHHHHHHH
Confidence 56899988877766643 33 36899999964554321 246799999999999988
Q ss_pred HHHHc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCcc-------CCCCCCceehHHHHHHHHHhhcCCC
Q 026418 77 EAVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY-------ANSVQAYVHVRDVALAHILVYETPS 145 (239)
Q Consensus 77 ~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~i~v~D~a~~~~~~~~~~~ 145 (239)
++.+. ++++.+++|+.+..+..... ...... ..+..... ......+...+|+++++.+++....
T Consensus 164 l~~~~~~~~i~v~~v~Pg~i~t~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~ 237 (254)
T TIGR02415 164 AAQELAPKGITVNAYCPGIVKTPMWEEI----DEETSE-IAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVSFLASEDS 237 (254)
T ss_pred HHHHhcccCeEEEEEecCcccChhhhhh----hhhhhh-cccCchHHHHHHHHhhCCCCCCCCHHHHHHHHHhhccccc
Confidence 76653 78999999998855431100 000000 00000000 0011237888999999999998653
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00072 Score=52.79 Aligned_cols=115 Identities=10% Similarity=-0.020 Sum_probs=73.5
Q ss_pred chhHhHHHHHHHHHHHh----cC-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++.++++++.+ .+ -.++|++||. .-+. .. .....|+.+|...+.+.+.
T Consensus 106 ~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~-~~~~--~~------------------~~~~~Y~~sKaa~~~~~~~ 164 (252)
T PRK07677 106 IDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVAT-YAWD--AG------------------PGVIHSAAAKAGVLAMTRT 164 (252)
T ss_pred HhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcCh-hhcc--CC------------------CCCcchHHHHHHHHHHHHH
Confidence 67899999999999843 22 3589999985 3221 10 1135699999999999887
Q ss_pred HHHH----cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 77 EAVA----RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 77 ~~~~----~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
++.+ .|+++..++||.+..+...............+.+..+ ..-+...+|+++++..++..
T Consensus 165 la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~va~~~~~l~~~ 229 (252)
T PRK07677 165 LAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVP------LGRLGTPEEIAGLAYFLLSD 229 (252)
T ss_pred HHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCC------CCCCCCHHHHHHHHHHHcCc
Confidence 6655 3789999999999754221111011122223332221 12356789999999888764
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.001 Score=52.35 Aligned_cols=115 Identities=17% Similarity=0.169 Sum_probs=73.7
Q ss_pred chhHhHHHHHHHHHHHhc---CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA---KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA 78 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~---~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~ 78 (239)
+++|+.++.++++++.+. .-.++|++||. +.+... .....|+.+|...+.+++.++
T Consensus 114 ~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~-~~~~~~--------------------~~~~~Y~asK~a~~~l~~~la 172 (264)
T PRK07576 114 VDIDLLGTFNVLKAAYPLLRRPGASIIQISAP-QAFVPM--------------------PMQAHVCAAKAGVDMLTRTLA 172 (264)
T ss_pred HHHHhHHHHHHHHHHHHHHHhCCCEEEEECCh-hhccCC--------------------CCccHHHHHHHHHHHHHHHHH
Confidence 568999999999988652 12589999995 322110 124679999999999999876
Q ss_pred HH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 79 VA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 79 ~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
.+ .+++++.++|+.+.+......... ........... ++ ...+...+|+|++++.++..
T Consensus 173 ~e~~~~gi~v~~v~pg~~~~t~~~~~~~~-~~~~~~~~~~~---~~--~~~~~~~~dva~~~~~l~~~ 234 (264)
T PRK07576 173 LEWGPEGIRVNSIVPGPIAGTEGMARLAP-SPELQAAVAQS---VP--LKRNGTKQDIANAALFLASD 234 (264)
T ss_pred HHhhhcCeEEEEEecccccCcHHHhhccc-CHHHHHHHHhc---CC--CCCCCCHHHHHHHHHHHcCh
Confidence 55 478999999998875321000000 01111111111 11 13356789999999999874
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00045 Score=53.75 Aligned_cols=105 Identities=17% Similarity=0.053 Sum_probs=71.4
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++. +.+..+||++||..+.++. .....|+.+|...+.+++.+
T Consensus 121 ~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~~ 179 (247)
T PRK08945 121 MQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGR---------------------ANWGAYAVSKFATEGMMQVL 179 (247)
T ss_pred HHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCC---------------------CCCcccHHHHHHHHHHHHHH
Confidence 5789999888888774 4567899999996332211 12356999999999999888
Q ss_pred HHHc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
+.+. ++++.+++|+.+-.+.... ...... ...+.-.+|+++++..++...
T Consensus 180 ~~~~~~~~i~~~~v~pg~v~t~~~~~-----------~~~~~~------~~~~~~~~~~~~~~~~~~~~~ 232 (247)
T PRK08945 180 ADEYQGTNLRVNCINPGGTRTAMRAS-----------AFPGED------PQKLKTPEDIMPLYLYLMGDD 232 (247)
T ss_pred HHHhcccCEEEEEEecCCccCcchhh-----------hcCccc------ccCCCCHHHHHHHHHHHhCcc
Confidence 7654 6888899998875542110 000000 123567799999999987543
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.0007 Score=53.05 Aligned_cols=115 Identities=9% Similarity=0.006 Sum_probs=74.5
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..+++++. +.+..++|++||. ..+... .....|+.+|.+.+.+++.+
T Consensus 119 ~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~asK~a~~~~~~~l 177 (258)
T PRK06935 119 MDINLNSVYHLSQAVAKVMAKQGSGKIINIASM-LSFQGG--------------------KFVPAYTASKHGVAGLTKAF 177 (258)
T ss_pred HHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCH-HhccCC--------------------CCchhhHHHHHHHHHHHHHH
Confidence 5678888777776664 4456789999996 544211 11357999999999999988
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
+++ .|+++.+++|+.+..+....... .......+.... + ...+...+|++..+.+++...
T Consensus 178 a~e~~~~gi~v~~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~----~--~~~~~~~~dva~~~~~l~s~~ 240 (258)
T PRK06935 178 ANELAAYNIQVNAIAPGYIKTANTAPIRA-DKNRNDEILKRI----P--AGRWGEPDDLMGAAVFLASRA 240 (258)
T ss_pred HHHhhhhCeEEEEEEeccccccchhhccc-ChHHHHHHHhcC----C--CCCCCCHHHHHHHHHHHcChh
Confidence 775 37999999999987653211100 001111222111 1 133677799999999888643
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00073 Score=52.10 Aligned_cols=113 Identities=15% Similarity=0.061 Sum_probs=73.9
Q ss_pred chhHhHHHHHHHHHHHhc--CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~--~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++..++.++.+. ...++|++||. .... . + ..+...|+.+|...|.+++.++.
T Consensus 103 ~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~-~~~~----~---~------------~~~~~~Y~~sKaa~~~~~~~la~ 162 (237)
T PRK12742 103 FKINIHAPYHASVEAARQMPEGGRIIIIGSV-NGDR----M---P------------VAGMAAYAASKSALQGMARGLAR 162 (237)
T ss_pred HhHHHHHHHHHHHHHHHHHhcCCeEEEEecc-cccc----C---C------------CCCCcchHHhHHHHHHHHHHHHH
Confidence 578999999998776654 24689999995 3110 0 0 02356799999999999988766
Q ss_pred H---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 80 A---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 80 ~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
+ .|+++.+++|+.+..+..... . .. ........ + ...+...+|+++++.+++...
T Consensus 163 ~~~~~gi~v~~v~Pg~~~t~~~~~~-~---~~-~~~~~~~~---~--~~~~~~p~~~a~~~~~l~s~~ 220 (237)
T PRK12742 163 DFGPRGITINVVQPGPIDTDANPAN-G---PM-KDMMHSFM---A--IKRHGRPEEVAGMVAWLAGPE 220 (237)
T ss_pred HHhhhCeEEEEEecCcccCCccccc-c---HH-HHHHHhcC---C--CCCCCCHHHHHHHHHHHcCcc
Confidence 5 479999999999976532211 1 11 11111111 1 123567899999999988643
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00017 Score=52.60 Aligned_cols=71 Identities=23% Similarity=0.206 Sum_probs=57.1
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+++|+.++.++++++++.+.+++|++||.++.++.. ....|+.+|...+.+++.. +..
T Consensus 109 ~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~~~---------------------~~~~y~~sk~~~~~~~~~~-~~~ 166 (180)
T smart00822 109 LAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLGNP---------------------GQANYAAANAFLDALAAHR-RAR 166 (180)
T ss_pred hchHhHHHHHHHHHhccCCcceEEEEccHHHhcCCC---------------------CchhhHHHHHHHHHHHHHH-Hhc
Confidence 678999999999999888888999999975555321 1456999999999999655 467
Q ss_pred CccEEEEecCccc
Q 026418 82 GVDLVVVNPVLVL 94 (239)
Q Consensus 82 ~~~~~i~Rp~~v~ 94 (239)
+++++.+.|+.+-
T Consensus 167 ~~~~~~~~~g~~~ 179 (180)
T smart00822 167 GLPATSINWGAWA 179 (180)
T ss_pred CCceEEEeecccc
Confidence 8999999888763
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.0007 Score=53.56 Aligned_cols=118 Identities=14% Similarity=0.069 Sum_probs=71.8
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..+++++. +.+ .++|++||. +.+... .....|+.+|...+.+++.+
T Consensus 111 ~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~-~~~~~~--------------------~~~~~Y~asKaal~~l~~~l 168 (272)
T PRK08589 111 MAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSF-SGQAAD--------------------LYRSGYNAAKGAVINFTKSI 168 (272)
T ss_pred HHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCch-hhcCCC--------------------CCCchHHHHHHHHHHHHHHH
Confidence 5678888877766654 334 689999996 433111 11456999999999999988
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHH-HHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHI-LKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
+.+ .|+++..+.||.+..+............+ ..+........+ ...+...+|+++++++++..
T Consensus 169 a~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~va~~~~~l~s~ 236 (272)
T PRK08589 169 AIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTP--LGRLGKPEEVAKLVVFLASD 236 (272)
T ss_pred HHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCC--CCCCcCHHHHHHHHHHHcCc
Confidence 765 37999999999987553211000000000 011110000011 12356789999999998864
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.0007 Score=53.10 Aligned_cols=119 Identities=13% Similarity=0.086 Sum_probs=74.2
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..+++++.+ .+..++|++||. ..+... .+...|+.+|...+.+.+.+
T Consensus 100 ~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~~sKaal~~~~~~l 158 (258)
T PRK06398 100 INVNVNGIFLMSKYTIPYMLKQDKGVIINIASV-QSFAVT--------------------RNAAAYVTSKHAVLGLTRSI 158 (258)
T ss_pred HHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcc-hhccCC--------------------CCCchhhhhHHHHHHHHHHH
Confidence 57899999999888754 345789999995 433211 13567999999999999998
Q ss_pred HHHc--CccEEEEecCcccCCCCCCCC----ChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 78 AVAR--GVDLVVVNPVLVLGPLLQSTV----NASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 78 ~~~~--~~~~~i~Rp~~v~G~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
+.+. ++++..++||.+-.+...... ..................+ ...+...+|+|+++++++..
T Consensus 159 a~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~eva~~~~~l~s~ 228 (258)
T PRK06398 159 AVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHP--MKRVGKPEEVAYVVAFLASD 228 (258)
T ss_pred HHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCC--cCCCcCHHHHHHHHHHHcCc
Confidence 7764 388899999988654211000 0000001100000000001 12367789999999998864
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.001 Score=53.28 Aligned_cols=105 Identities=15% Similarity=0.096 Sum_probs=71.6
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++. +.+..++|++||. +.+.... .....|+.+|.+.+.+++.+
T Consensus 147 ~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~-~~~~~~~-------------------p~~~~Y~asKaal~~l~~~l 206 (293)
T PRK05866 147 MVLNYYAPLRLIRGLAPGMLERGDGHIINVATW-GVLSEAS-------------------PLFSVYNASKAALSAVSRVI 206 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcEEEEECCh-hhcCCCC-------------------CCcchHHHHHHHHHHHHHHH
Confidence 5679988888777654 5667899999995 5442110 12467999999999988887
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
+.+ .|++++.++||.+-.+.... ... . .....+..+++|+.++.++...
T Consensus 207 a~e~~~~gI~v~~v~pg~v~T~~~~~-----------~~~-----~--~~~~~~~pe~vA~~~~~~~~~~ 258 (293)
T PRK05866 207 ETEWGDRGVHSTTLYYPLVATPMIAP-----------TKA-----Y--DGLPALTADEAAEWMVTAARTR 258 (293)
T ss_pred HHHhcccCcEEEEEEcCcccCccccc-----------ccc-----c--cCCCCCCHHHHHHHHHHHHhcC
Confidence 654 48999999999775442110 000 0 0122467899999999999754
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00061 Score=53.28 Aligned_cols=113 Identities=14% Similarity=0.095 Sum_probs=74.2
Q ss_pred chhHhHHHHHHHHHHHhc----C--------CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----K--------VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAV 69 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----~--------v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~ 69 (239)
+++|+.++.++++++... . ..++|++||. ..+... .+...|+.+|..
T Consensus 114 ~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~-~~~~~~--------------------~~~~~Y~~sK~a 172 (258)
T PRK06949 114 FDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASV-AGLRVL--------------------PQIGLYCMSKAA 172 (258)
T ss_pred HhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcc-cccCCC--------------------CCccHHHHHHHH
Confidence 568999999999887532 1 2589999995 433110 124679999999
Q ss_pred HHHHHHHHHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 70 AEKAAWEEAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 70 ~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
.+.+++.++.+ .++++++++||.++++....... ......+ .... + ...+...+|+++++.+++..
T Consensus 173 ~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~--~~~~~~~-~~~~---~--~~~~~~p~~~~~~~~~l~~~ 241 (258)
T PRK06949 173 VVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWE--TEQGQKL-VSML---P--RKRVGKPEDLDGLLLLLAAD 241 (258)
T ss_pred HHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccC--hHHHHHH-HhcC---C--CCCCcCHHHHHHHHHHHhCh
Confidence 99999888765 48999999999999875332111 0111111 1111 1 12355579999999998864
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.0012 Score=51.46 Aligned_cols=116 Identities=13% Similarity=0.063 Sum_probs=73.1
Q ss_pred chhHhHHHHHHHHH----HHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVA----AAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a----~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..++++ +++.+..++|++||. ..+.... .....|+.+|.+.+.+++.+
T Consensus 112 ~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~-~~~~~~~-------------------~~~~~Y~~sK~a~~~~~~~l 171 (254)
T PRK07478 112 LATNLTSAFLGAKHQIPAMLARGGGSLIFTSTF-VGHTAGF-------------------PGMAAYAASKAGLIGLTQVL 171 (254)
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCCceEEEEech-HhhccCC-------------------CCcchhHHHHHHHHHHHHHH
Confidence 57888877766554 445556789999995 4332110 12467999999999999988
Q ss_pred HHHc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
+.+. |+++..++||.+-.+..... ... ........... + ...+...+|+++++++++...
T Consensus 172 a~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~-~~~~~~~~~~~---~--~~~~~~~~~va~~~~~l~s~~ 234 (254)
T PRK07478 172 AAEYGAQGIRVNALLPGGTDTPMGRAM-GDT-PEALAFVAGLH---A--LKRMAQPEEIAQAALFLASDA 234 (254)
T ss_pred HHHHhhcCEEEEEEeeCcccCcccccc-cCC-HHHHHHHHhcC---C--CCCCcCHHHHHHHHHHHcCch
Confidence 7764 68999999999865521110 000 11111221111 1 123567899999999988643
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.0012 Score=53.85 Aligned_cols=111 Identities=16% Similarity=0.117 Sum_probs=72.9
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++.+++. +.+..++|++||. ..+... .....|+.+|...+.+.+.+
T Consensus 112 ~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~-~~~~~~--------------------p~~~~Y~asKaal~~~~~sL 170 (330)
T PRK06139 112 IQTNLIGYMRDAHAALPIFKKQGHGIFINMISL-GGFAAQ--------------------PYAAAYSASKFGLRGFSEAL 170 (330)
T ss_pred HHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcCh-hhcCCC--------------------CCchhHHHHHHHHHHHHHHH
Confidence 5789999998887763 4445689999995 433211 11457999999877766666
Q ss_pred HHH----cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC
Q 026418 78 AVA----RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS 145 (239)
Q Consensus 78 ~~~----~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 145 (239)
+.+ .++.++.+.|+.+..+....... . .+... .....+.+.+|+|++++.++.++.
T Consensus 171 ~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~--------~-~~~~~---~~~~~~~~pe~vA~~il~~~~~~~ 230 (330)
T PRK06139 171 RGELADHPDIHVCDVYPAFMDTPGFRHGAN--------Y-TGRRL---TPPPPVYDPRRVAKAVVRLADRPR 230 (330)
T ss_pred HHHhCCCCCeEEEEEecCCccCcccccccc--------c-ccccc---cCCCCCCCHHHHHHHHHHHHhCCC
Confidence 543 37999999999998764321100 0 01100 111236789999999999997654
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00043 Score=55.76 Aligned_cols=87 Identities=17% Similarity=0.093 Sum_probs=56.1
Q ss_pred chhHhHH----HHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIG----TKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~----t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.+ +..++..+++.+..++|++||. +.+..... +.++..... +..+...|+.||.+.+.+.+.+
T Consensus 121 ~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~-~~~~~~~~----~~~~~~~~~---~~~~~~~Y~~SK~a~~~~~~~l 192 (306)
T PRK06197 121 FGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSG-GHRIRAAI----HFDDLQWER---RYNRVAAYGQSKLANLLFTYEL 192 (306)
T ss_pred hhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCH-HHhccCCC----CccccCccc---CCCcHHHHHHHHHHHHHHHHHH
Confidence 5789988 6777777777666799999995 53321111 111111100 1234578999999999999988
Q ss_pred HHHc---CccEEE--EecCcccCC
Q 026418 78 AVAR---GVDLVV--VNPVLVLGP 96 (239)
Q Consensus 78 ~~~~---~~~~~i--~Rp~~v~G~ 96 (239)
+++. ++++.+ +.||.+..+
T Consensus 193 a~~l~~~~i~v~~v~~~PG~v~T~ 216 (306)
T PRK06197 193 QRRLAAAGATTIAVAAHPGVSNTE 216 (306)
T ss_pred HHHhhcCCCCeEEEEeCCCcccCc
Confidence 7654 555544 579988654
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.0011 Score=49.74 Aligned_cols=112 Identities=18% Similarity=0.164 Sum_probs=74.8
Q ss_pred chhHhHHHHHHHHHHHhc--CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~--~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++.++++++.+. +-.+++++||..+..+ . .....|+.+|...+.+.+.++.
T Consensus 83 ~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~---------~------------~~~~~Y~~sK~a~~~~~~~la~ 141 (199)
T PRK07578 83 LQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEP---------I------------PGGASAATVNGALEGFVKAAAL 141 (199)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCC---------C------------CCchHHHHHHHHHHHHHHHHHH
Confidence 578999999999988652 2357999998522111 0 1246799999999999988876
Q ss_pred H--cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCceEEE
Q 026418 80 A--RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLC 152 (239)
Q Consensus 80 ~--~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~ 152 (239)
+ .|+++..+.|+.+-.+. ...... ++ ...++..+|+|+++..+++....+.+|++
T Consensus 142 e~~~gi~v~~i~Pg~v~t~~---------~~~~~~-------~~--~~~~~~~~~~a~~~~~~~~~~~~g~~~~~ 198 (199)
T PRK07578 142 ELPRGIRINVVSPTVLTESL---------EKYGPF-------FP--GFEPVPAARVALAYVRSVEGAQTGEVYKV 198 (199)
T ss_pred HccCCeEEEEEcCCcccCch---------hhhhhc-------CC--CCCCCCHHHHHHHHHHHhccceeeEEecc
Confidence 4 48999999998873221 000000 11 12367899999999999875543335543
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.0013 Score=51.36 Aligned_cols=116 Identities=16% Similarity=0.066 Sum_probs=73.6
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..+++++. +.+..++|++||. ..+... .....|+.+|.+.+.+++.+
T Consensus 113 ~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~-~~~~~~--------------------~~~~~Y~~sKaa~~~~~~~l 171 (253)
T PRK06172 113 MGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASV-AGLGAA--------------------PKMSIYAASKHAVIGLTKSA 171 (253)
T ss_pred HHHhhHHHHHHHHHHHHHHHhcCCcEEEEECch-hhccCC--------------------CCCchhHHHHHHHHHHHHHH
Confidence 5688998877766543 3445789999995 444221 12467999999999999888
Q ss_pred HHHc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
+.+. |+++..+.||.+-.+...............+.. ..+ ...+...+|+++.+.+++...
T Consensus 172 a~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~p~~ia~~~~~l~~~~ 235 (253)
T PRK06172 172 AIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAA-MHP-----VGRIGKVEEVASAVLYLCSDG 235 (253)
T ss_pred HHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhc-cCC-----CCCccCHHHHHHHHHHHhCcc
Confidence 7664 799999999988654322110000111111111 111 123567899999999988653
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00063 Score=60.78 Aligned_cols=127 Identities=20% Similarity=0.166 Sum_probs=76.6
Q ss_pred chhHhHHHHHHHHHH----HhcC-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.+...+.+++ ++.+ -.++|++||..++++. .....|+.+|.+.+.+++.
T Consensus 521 ~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~---------------------~~~~aY~aSKaA~~~l~r~ 579 (676)
T TIGR02632 521 LDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAG---------------------KNASAYSAAKAAEAHLARC 579 (676)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCC---------------------CCCHHHHHHHHHHHHHHHH
Confidence 467888776665444 3444 3589999996454431 1246799999999999998
Q ss_pred HHHH---cCccEEEEecCccc-CCCCCCCCChh---------HHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 77 EAVA---RGVDLVVVNPVLVL-GPLLQSTVNAS---------IIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 77 ~~~~---~~~~~~i~Rp~~v~-G~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
++.+ .|+++..++|+.++ |.+........ ...+...... ......+++.+|+|+++.+++..
T Consensus 580 lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----r~~l~r~v~peDVA~av~~L~s~ 654 (676)
T TIGR02632 580 LAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAK-----RTLLKRHIFPADIAEAVFFLASS 654 (676)
T ss_pred HHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHh-----cCCcCCCcCHHHHHHHHHHHhCC
Confidence 8775 37899999999886 33211100000 0000111110 11224578999999999988764
Q ss_pred C--CCCc-eEEEec
Q 026418 144 P--SASG-RYLCAE 154 (239)
Q Consensus 144 ~--~~~~-~y~~~~ 154 (239)
. ..-| ++++.|
T Consensus 655 ~~~~~TG~~i~vDG 668 (676)
T TIGR02632 655 KSEKTTGCIITVDG 668 (676)
T ss_pred cccCCcCcEEEECC
Confidence 3 2224 556553
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.0015 Score=51.17 Aligned_cols=116 Identities=11% Similarity=-0.024 Sum_probs=73.4
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..+++++.. .+..++|++||. ..+... .....|+.+|.+.+.+.+.+
T Consensus 114 ~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~~sKaa~~~~~~~l 172 (260)
T PRK07063 114 FAVDLDGAWNGCRAVLPGMVERGRGSIVNIAST-HAFKII--------------------PGCFPYPVAKHGLLGLTRAL 172 (260)
T ss_pred HHhhhHHHHHHHHHHHHHHHhhCCeEEEEECCh-hhccCC--------------------CCchHHHHHHHHHHHHHHHH
Confidence 57899999888888753 345689999996 322110 12456999999999999988
Q ss_pred HHHc---CccEEEEecCcccCCCCCCCC---ChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 78 AVAR---GVDLVVVNPVLVLGPLLQSTV---NASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
+.+. |+++..++||.+-.+...... .............. + ..-+...+|++.++++++...
T Consensus 173 a~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~----~--~~r~~~~~~va~~~~fl~s~~ 239 (260)
T PRK07063 173 GIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQ----P--MKRIGRPEEVAMTAVFLASDE 239 (260)
T ss_pred HHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcC----C--CCCCCCHHHHHHHHHHHcCcc
Confidence 7654 799999999988554211000 00000111111111 1 112556899999999988643
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00089 Score=52.27 Aligned_cols=113 Identities=17% Similarity=0.119 Sum_probs=73.4
Q ss_pred chhHhHHHHHHHHHHHhc----C-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----K-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++..+++++... + -.++|++||.++.....+ .....|+.+|...+.+.+.
T Consensus 114 ~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~-------------------~~~~~Y~asKaal~~~~~~ 174 (253)
T PRK05867 114 QNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVP-------------------QQVSHYCASKAAVIHLTKA 174 (253)
T ss_pred HHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCC-------------------CCccchHHHHHHHHHHHHH
Confidence 578999999999887532 2 246899988522111000 1135799999999999998
Q ss_pred HHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 77 ~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
++++ .|+++..++||.+-.+..... ......+....+ ...+...+|+|+++++++..
T Consensus 175 la~e~~~~gI~vn~i~PG~v~t~~~~~~----~~~~~~~~~~~~------~~r~~~p~~va~~~~~L~s~ 234 (253)
T PRK05867 175 MAVELAPHKIRVNSVSPGYILTELVEPY----TEYQPLWEPKIP------LGRLGRPEELAGLYLYLASE 234 (253)
T ss_pred HHHHHhHhCeEEEEeecCCCCCcccccc----hHHHHHHHhcCC------CCCCcCHHHHHHHHHHHcCc
Confidence 8765 389999999999966532211 111112222111 12356789999999998864
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.0015 Score=52.41 Aligned_cols=117 Identities=17% Similarity=0.130 Sum_probs=75.7
Q ss_pred chhHhHHHHHHHHHHHhc---CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA---KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA 78 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~---~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~ 78 (239)
+++|+.++.++++++... ...++|++||. +.+... .....|+.+|...+.+.+.++
T Consensus 113 ~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~asKaal~~~~~~l~ 171 (296)
T PRK05872 113 IDVNLLGVFHTVRATLPALIERRGYVLQVSSL-AAFAAA--------------------PGMAAYCASKAGVEAFANALR 171 (296)
T ss_pred HHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCH-hhcCCC--------------------CCchHHHHHHHHHHHHHHHHH
Confidence 578999999999988642 23589999996 433211 124579999999999988776
Q ss_pred HH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 79 VA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 79 ~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
.+ .|+.+..+.|+.+..+........ ...+..+....+. ....++..+|++++++.++...
T Consensus 172 ~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~-~~~~~~~~~~~~~----p~~~~~~~~~va~~i~~~~~~~ 235 (296)
T PRK05872 172 LEVAHHGVTVGSAYLSWIDTDLVRDADAD-LPAFRELRARLPW----PLRRTTSVEKCAAAFVDGIERR 235 (296)
T ss_pred HHHHHHCcEEEEEecCcccchhhhhcccc-chhHHHHHhhCCC----cccCCCCHHHHHHHHHHHHhcC
Confidence 43 589999999998865532111000 0111222211111 1124667999999999998754
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00039 Score=54.35 Aligned_cols=116 Identities=17% Similarity=0.125 Sum_probs=72.8
Q ss_pred chhHhHHHHHHHHHHHhc----C-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----K-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++..+++++.+. + -.++|++||.+..++.+ ....|+.+|...+.+++.
T Consensus 107 ~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---------------------~~~~Y~~sK~a~~~~~~~ 165 (256)
T PRK08643 107 YNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNP---------------------ELAVYSSTKFAVRGLTQT 165 (256)
T ss_pred HHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCC---------------------CCchhHHHHHHHHHHHHH
Confidence 568999988777776542 2 35899999964443211 245699999999988888
Q ss_pred HHHH---cCccEEEEecCcccCCCCCCCC-------ChhHHH-HHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 77 EAVA---RGVDLVVVNPVLVLGPLLQSTV-------NASIIH-ILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 77 ~~~~---~~~~~~i~Rp~~v~G~~~~~~~-------~~~~~~-~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
++.+ .|+++..++|+.+..+...... ...... ...+.... + ...+...+|++.++.+++...
T Consensus 166 la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~~~~~va~~~~~L~~~~ 238 (256)
T PRK08643 166 AARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDI----T--LGRLSEPEDVANCVSFLAGPD 238 (256)
T ss_pred HHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccC----C--CCCCcCHHHHHHHHHHHhCcc
Confidence 7764 4799999999999776321100 000000 01111110 1 123567899999999988643
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00077 Score=52.49 Aligned_cols=115 Identities=17% Similarity=0.094 Sum_probs=69.2
Q ss_pred chhHhHHHHHHHHHH----HhcC-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++..+++++ ++.+ .+++|++||. ..+.. ..+...|+.+|...+.+++.
T Consensus 109 ~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~-~~~~~--------------------~~~~~~Y~~sKaa~~~~~~~ 167 (251)
T PRK06924 109 VHLNLLAPMILTSTFMKHTKDWKVDKRVINISSG-AAKNP--------------------YFGWSAYCSSKAGLDMFTQT 167 (251)
T ss_pred hccceehHHHHHHHHHHHHhccCCCceEEEecch-hhcCC--------------------CCCcHHHhHHHHHHHHHHHH
Confidence 456888755555444 4433 4689999994 43211 12356799999999999998
Q ss_pred HHHH-----cCccEEEEecCcccCCCCCC---CCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 77 EAVA-----RGVDLVVVNPVLVLGPLLQS---TVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 77 ~~~~-----~~~~~~i~Rp~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
++.+ .++++..++|+.+-.+.... ........+..+.... + ...+...+|+|+.++.++..
T Consensus 168 la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~~~~dva~~~~~l~~~ 236 (251)
T PRK06924 168 VATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLK----E--EGKLLSPEYVAKALRNLLET 236 (251)
T ss_pred HHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHh----h--cCCcCCHHHHHHHHHHHHhc
Confidence 8765 36889999999875432100 0000000011111100 1 11267889999999999875
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.0017 Score=51.05 Aligned_cols=108 Identities=17% Similarity=0.050 Sum_probs=72.3
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.|+.++++++.+ .+..++|++||..+.++. .....|+.+|...+.+++.+
T Consensus 108 ~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~l 166 (263)
T PRK09072 108 LALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGY---------------------PGYASYCASKFALRGFSEAL 166 (263)
T ss_pred HhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCC---------------------CCccHHHHHHHHHHHHHHHH
Confidence 56899999999988854 334679999885333321 11456999999998888777
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
+.+ .++.++.+.|+.+..+.... .... .. ......+..++|+|++++.+++..
T Consensus 167 ~~~~~~~~i~v~~v~Pg~~~t~~~~~-------~~~~-~~------~~~~~~~~~~~~va~~i~~~~~~~ 222 (263)
T PRK09072 167 RRELADTGVRVLYLAPRATRTAMNSE-------AVQA-LN------RALGNAMDDPEDVAAAVLQAIEKE 222 (263)
T ss_pred HHHhcccCcEEEEEecCcccccchhh-------hccc-cc------ccccCCCCCHHHHHHHHHHHHhCC
Confidence 654 47889999998885542110 0000 00 001124677899999999999865
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.0024 Score=48.79 Aligned_cols=101 Identities=15% Similarity=0.057 Sum_probs=69.4
Q ss_pred chhHhHHHHHHHHHHHhc---CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA---KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA 78 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~---~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~ 78 (239)
+++|+.++.++++++.+. .-.++|++||..++++.... .+...|+.+|...+.+++.++
T Consensus 100 ~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------------------~~~~~Y~~sK~a~~~~~~~~~ 161 (222)
T PRK06953 100 MHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDATG------------------TTGWLYRASKAALNDALRAAS 161 (222)
T ss_pred HhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccccC------------------CCccccHHhHHHHHHHHHHHh
Confidence 578999999999999752 22478999986455542211 122469999999999999887
Q ss_pred HHc-CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 79 VAR-GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 79 ~~~-~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
... ++++..++|+.+.-+... . ...+..++.+..+..++...
T Consensus 162 ~~~~~i~v~~v~Pg~i~t~~~~---------------~---------~~~~~~~~~~~~~~~~~~~~ 204 (222)
T PRK06953 162 LQARHATCIALHPGWVRTDMGG---------------A---------QAALDPAQSVAGMRRVIAQA 204 (222)
T ss_pred hhccCcEEEEECCCeeecCCCC---------------C---------CCCCCHHHHHHHHHHHHHhc
Confidence 654 788999999988654210 0 11245678888887776543
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.0031 Score=49.47 Aligned_cols=115 Identities=10% Similarity=-0.000 Sum_probs=71.1
Q ss_pred chhHhHHHHHHHH----HHHhcC-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIV----AAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~----a~~~~~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++..+++ .+.+.+ -.++|++||. ..+. + ..+...|+.+|.+.+.+.+.
T Consensus 113 ~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~-~~~~--------~------------~~~~~~Y~~sKaa~~~~~~~ 171 (261)
T PRK08936 113 INTNLTGAFLGSREAIKYFVEHDIKGNIINMSSV-HEQI--------P------------WPLFVHYAASKGGVKLMTET 171 (261)
T ss_pred HHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccc-cccC--------C------------CCCCcccHHHHHHHHHHHHH
Confidence 5678877765554 445544 3689999995 3221 0 01246799999888877777
Q ss_pred HHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 77 ~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
++.. .|+++..++|+.+..+........ ...........+ ...+...+|+++++.+++...
T Consensus 172 la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~-~~~~~~~~~~~~------~~~~~~~~~va~~~~~l~s~~ 235 (261)
T PRK08936 172 LAMEYAPKGIRVNNIGPGAINTPINAEKFAD-PKQRADVESMIP------MGYIGKPEEIAAVAAWLASSE 235 (261)
T ss_pred HHHHHhhcCeEEEEEEECcCCCCccccccCC-HHHHHHHHhcCC------CCCCcCHHHHHHHHHHHcCcc
Confidence 6554 389999999999987643221111 111122221111 123666899999999988643
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.0033 Score=49.34 Aligned_cols=114 Identities=18% Similarity=0.135 Sum_probs=75.2
Q ss_pred chhHhHHHHHHHHHHHh----cC-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++..+++++.+ .+ -.++|++||. .-+ .. . .+...|+.+|.+.+.+++.
T Consensus 125 ~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~-~~~--~~------~------------~~~~~Y~~sKaal~~~~~~ 183 (262)
T PRK07831 125 LDVTLTGTFRATRAALRYMRARGHGGVIVNNASV-LGW--RA------Q------------HGQAHYAAAKAGVMALTRC 183 (262)
T ss_pred HHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCch-hhc--CC------C------------CCCcchHHHHHHHHHHHHH
Confidence 56899999988888754 22 3578888885 322 10 0 1245799999999999999
Q ss_pred HHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 77 ~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
++.+ .|+++..++|+.+..+...... ....+..+....+ ..-+...+|+++++++++...
T Consensus 184 la~e~~~~gI~v~~i~Pg~~~t~~~~~~~--~~~~~~~~~~~~~------~~r~~~p~~va~~~~~l~s~~ 246 (262)
T PRK07831 184 SALEAAEYGVRINAVAPSIAMHPFLAKVT--SAELLDELAAREA------FGRAAEPWEVANVIAFLASDY 246 (262)
T ss_pred HHHHhCccCeEEEEEeeCCccCccccccc--CHHHHHHHHhcCC------CCCCcCHHHHHHHHHHHcCch
Confidence 8765 5899999999999876432111 1122223322221 123556789999999988643
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0021 Score=57.47 Aligned_cols=104 Identities=19% Similarity=0.199 Sum_probs=73.7
Q ss_pred chhHhHHHHHHHHHH----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++ ++.+..++|++||. +.+.... ....|+.+|...+.+++.+
T Consensus 478 ~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~-~~~~~~~--------------------~~~~Y~~sK~a~~~~~~~l 536 (657)
T PRK07201 478 MAVNYFGAVRLILGLLPHMRERRFGHVVNVSSI-GVQTNAP--------------------RFSAYVASKAALDAFSDVA 536 (657)
T ss_pred HHHHHHHHHHHHHHHHHhhhhcCCCEEEEECCh-hhcCCCC--------------------CcchHHHHHHHHHHHHHHH
Confidence 578999988887765 44556799999995 6553211 2456999999999999887
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
+.+ .|++++.++|+.+..+...+.. .++ ....+..+++|+.++.++...
T Consensus 537 a~e~~~~~i~v~~v~pg~v~T~~~~~~~----------------~~~--~~~~~~~~~~a~~i~~~~~~~ 588 (657)
T PRK07201 537 ASETLSDGITFTTIHMPLVRTPMIAPTK----------------RYN--NVPTISPEEAADMVVRAIVEK 588 (657)
T ss_pred HHHHHhhCCcEEEEECCcCcccccCccc----------------ccc--CCCCCCHHHHHHHHHHHHHhC
Confidence 655 4899999999999765322110 000 122567899999999987643
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.0019 Score=50.43 Aligned_cols=114 Identities=11% Similarity=0.034 Sum_probs=73.2
Q ss_pred chhHhHHHHHHHHHHHh----cC-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++..+.+++.+ .+ -.++|++||. +.+... .....|+.+|.+.+.+.+.
T Consensus 111 ~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~-~~~~~~--------------------~~~~~Y~asK~a~~~l~~~ 169 (251)
T PRK12481 111 ININQKTVFFLSQAVAKQFVKQGNGGKIINIASM-LSFQGG--------------------IRVPSYTASKSAVMGLTRA 169 (251)
T ss_pred heeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCCh-hhcCCC--------------------CCCcchHHHHHHHHHHHHH
Confidence 57899998888887653 23 3589999996 433211 1134699999999999988
Q ss_pred HHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 77 ~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
++.+ .|+++..++||.+-.+.... ..........+.... +. ..+...+|+++++.+++..
T Consensus 170 la~e~~~~girvn~v~PG~v~t~~~~~-~~~~~~~~~~~~~~~----p~--~~~~~peeva~~~~~L~s~ 232 (251)
T PRK12481 170 LATELSQYNINVNAIAPGYMATDNTAA-LRADTARNEAILERI----PA--SRWGTPDDLAGPAIFLSSS 232 (251)
T ss_pred HHHHHhhcCeEEEEEecCCCccCchhh-cccChHHHHHHHhcC----CC--CCCcCHHHHHHHHHHHhCc
Confidence 7764 58999999999986542111 000011111222211 11 2356789999999998864
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0044 Score=48.51 Aligned_cols=109 Identities=12% Similarity=-0.063 Sum_probs=70.7
Q ss_pred chhHhHHHHHHHHHH----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.+...+.+++ ++.+-.++|++||. ..... ..+...|+.+|...+.+.+.+
T Consensus 124 ~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~-~~~~~--------------------~~~~~~Y~~sK~a~~~l~~~l 182 (256)
T PRK12859 124 YMVNVRATTLLSSQFARGFDKKSGGRIINMTSG-QFQGP--------------------MVGELAYAATKGAIDALTSSL 182 (256)
T ss_pred HHHHhHHHHHHHHHHHHHHhhcCCeEEEEEccc-ccCCC--------------------CCCchHHHHHHHHHHHHHHHH
Confidence 578999888886444 33334689999995 32210 013567999999999998888
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
+.+ .|+++..++|+.+-.+... ......+.... + ...+...+|+++++.+++..
T Consensus 183 a~~~~~~~i~v~~v~PG~i~t~~~~------~~~~~~~~~~~----~--~~~~~~~~d~a~~~~~l~s~ 239 (256)
T PRK12859 183 AAEVAHLGITVNAINPGPTDTGWMT------EEIKQGLLPMF----P--FGRIGEPKDAARLIKFLASE 239 (256)
T ss_pred HHHhhhhCeEEEEEEEccccCCCCC------HHHHHHHHhcC----C--CCCCcCHHHHHHHHHHHhCc
Confidence 765 4899999999988654211 11111111111 1 12245689999999988764
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0007 Score=52.50 Aligned_cols=73 Identities=27% Similarity=0.240 Sum_probs=53.7
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..+++++. +.+..++|++||. ..+... .+...|+.+|...|.+++.+
T Consensus 106 ~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~-~~~~~~--------------------~~~~~Y~~sK~a~~~~~~~~ 164 (243)
T PRK07023 106 VGLNVAAPLMLTAALAQAASDAAERRILHISSG-AARNAY--------------------AGWSVYCATKAALDHHARAV 164 (243)
T ss_pred eeeeehHHHHHHHHHHHHhhccCCCEEEEEeCh-hhcCCC--------------------CCchHHHHHHHHHHHHHHHH
Confidence 5678888666655554 3445799999995 544211 23567999999999999988
Q ss_pred HHH--cCccEEEEecCcccC
Q 026418 78 AVA--RGVDLVVVNPVLVLG 95 (239)
Q Consensus 78 ~~~--~~~~~~i~Rp~~v~G 95 (239)
+.. .++++.+++|+.+-.
T Consensus 165 ~~~~~~~i~v~~v~pg~~~t 184 (243)
T PRK07023 165 ALDANRALRIVSLAPGVVDT 184 (243)
T ss_pred HhcCCCCcEEEEecCCcccc
Confidence 754 579999999998844
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.001 Score=54.06 Aligned_cols=103 Identities=17% Similarity=0.100 Sum_probs=70.7
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.|+..+.+++. +.+..++|++||.++.+.... .....|+.||...+.+.+.+
T Consensus 162 ~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~-------------------p~~~~Y~aSKaal~~~~~~L 222 (320)
T PLN02780 162 IKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSD-------------------PLYAVYAATKAYIDQFSRCL 222 (320)
T ss_pred HHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCC-------------------ccchHHHHHHHHHHHHHHHH
Confidence 6789999999888864 345578999999633221100 11467999999999999888
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
+.+ .|+++..+.||.+-.+... ..+. .......+++|+.++..+..
T Consensus 223 ~~El~~~gI~V~~v~PG~v~T~~~~------------~~~~--------~~~~~~p~~~A~~~~~~~~~ 271 (320)
T PLN02780 223 YVEYKKSGIDVQCQVPLYVATKMAS------------IRRS--------SFLVPSSDGYARAALRWVGY 271 (320)
T ss_pred HHHHhccCeEEEEEeeCceecCccc------------ccCC--------CCCCCCHHHHHHHHHHHhCC
Confidence 765 3899999999998543210 0000 01134678999999988853
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0011 Score=53.74 Aligned_cols=86 Identities=17% Similarity=0.017 Sum_probs=58.3
Q ss_pred chhHhHHHHHHHHHHHh---cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE---AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA 78 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~---~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~ 78 (239)
+++|+.+...+.+.+.. .+..++|++||.+..++..... .+.++.+ ..+...|+.||.+.+.+.++++
T Consensus 120 ~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~---~~~~~~~------~~~~~~Y~~SK~a~~~~~~~la 190 (313)
T PRK05854 120 FGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWD---DLNWERS------YAGMRAYSQSKIAVGLFALELD 190 (313)
T ss_pred hhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCcc---ccccccc------CcchhhhHHHHHHHHHHHHHHH
Confidence 57899998777776652 2345899999964444322111 2222221 2345679999999999999887
Q ss_pred HH-----cCccEEEEecCcccCC
Q 026418 79 VA-----RGVDLVVVNPVLVLGP 96 (239)
Q Consensus 79 ~~-----~~~~~~i~Rp~~v~G~ 96 (239)
++ .|+.+..+.||.+-.+
T Consensus 191 ~~~~~~~~gI~v~~v~PG~v~T~ 213 (313)
T PRK05854 191 RRSRAAGWGITSNLAHPGVAPTN 213 (313)
T ss_pred HHhhcCCCCeEEEEEecceeccC
Confidence 63 3689999999988654
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.01 Score=45.72 Aligned_cols=120 Identities=13% Similarity=0.029 Sum_probs=74.0
Q ss_pred chhHhHHHHHHHHHHHh----cC--CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAW 75 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~--v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~ 75 (239)
+++|+.++..+.+++.. .+ ..++|++||. .... +. .....|+.+|...+.+++
T Consensus 102 ~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~-~~~~---~~-----------------~~~~~Y~asKaal~~l~~ 160 (236)
T PRK06483 102 MQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDY-VVEK---GS-----------------DKHIAYAASKAALDNMTL 160 (236)
T ss_pred HHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcch-hhcc---CC-----------------CCCccHHHHHHHHHHHHH
Confidence 56788888877666654 22 3579999995 3211 00 124579999999999999
Q ss_pred HHHHHc--CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCc-eEEE
Q 026418 76 EEAVAR--GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASG-RYLC 152 (239)
Q Consensus 76 ~~~~~~--~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~y~~ 152 (239)
.++.+. ++++..++|+.+.-+... ............+ .+ -+...+|+++++.+++......| ++.+
T Consensus 161 ~~a~e~~~~irvn~v~Pg~~~~~~~~-----~~~~~~~~~~~~~--~~----~~~~~~~va~~~~~l~~~~~~~G~~i~v 229 (236)
T PRK06483 161 SFAAKLAPEVKVNSIAPALILFNEGD-----DAAYRQKALAKSL--LK----IEPGEEEIIDLVDYLLTSCYVTGRSLPV 229 (236)
T ss_pred HHHHHHCCCcEEEEEccCceecCCCC-----CHHHHHHHhccCc--cc----cCCCHHHHHHHHHHHhcCCCcCCcEEEe
Confidence 998774 588889999987432111 1111222222211 11 13468999999999886444444 4444
Q ss_pred e
Q 026418 153 A 153 (239)
Q Consensus 153 ~ 153 (239)
.
T Consensus 230 d 230 (236)
T PRK06483 230 D 230 (236)
T ss_pred C
Confidence 3
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0044 Score=48.84 Aligned_cols=112 Identities=16% Similarity=0.032 Sum_probs=71.8
Q ss_pred chhHhHHHHHHHHHHHhcC----------CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK----------VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAE 71 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~----------v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E 71 (239)
+++|+.++..+++++.... ..++|++||. .... + ..+...|+.+|...+
T Consensus 123 ~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~-~~~~--------~------------~~~~~~Y~asK~a~~ 181 (267)
T TIGR02685 123 FGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDA-MTDQ--------P------------LLGFTMYTMAKHALE 181 (267)
T ss_pred HHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhh-hccC--------C------------CcccchhHHHHHHHH
Confidence 6789999999998765331 1357777773 2110 0 023567999999999
Q ss_pred HHHHHHHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 72 KAAWEEAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 72 ~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
.+.+.++.+ .|+++..++|+.+..+.... ...........+ . ...+...+|++++++.++...
T Consensus 182 ~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~-----~~~~~~~~~~~~--~---~~~~~~~~~va~~~~~l~~~~ 247 (267)
T TIGR02685 182 GLTRSAALELAPLQIRVNGVAPGLSLLPDAMP-----FEVQEDYRRKVP--L---GQREASAEQIADVVIFLVSPK 247 (267)
T ss_pred HHHHHHHHHHhhhCeEEEEEecCCccCccccc-----hhHHHHHHHhCC--C---CcCCCCHHHHHHHHHHHhCcc
Confidence 999988766 58999999999986553211 111111111111 1 112457899999999988654
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0087 Score=43.76 Aligned_cols=125 Identities=17% Similarity=0.122 Sum_probs=84.6
Q ss_pred hHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHcCccE
Q 026418 6 VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVARGVDL 85 (239)
Q Consensus 6 v~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 85 (239)
......|++..+.++++|++.+++.++.|-++... -.++| ..|...|...+..+|. +..+....+++|
T Consensus 82 ~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~r-----LvD~p------~fP~ey~~~A~~~ae~-L~~Lr~~~~l~W 149 (211)
T COG2910 82 SKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTR-----LVDTP------DFPAEYKPEALAQAEF-LDSLRAEKSLDW 149 (211)
T ss_pred HHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCce-----eecCC------CCchhHHHHHHHHHHH-HHHHhhccCcce
Confidence 34466788899999999999999987777655432 22222 2344557777777774 344445557999
Q ss_pred EEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCc-eE
Q 026418 86 VVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASG-RY 150 (239)
Q Consensus 86 ~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~y 150 (239)
|.+-|+..|-|+...+.... -+.........-++|...|.|-+++.-++++.... +|
T Consensus 150 TfvSPaa~f~PGerTg~yrl--------ggD~ll~n~~G~SrIS~aDYAiA~lDe~E~~~h~rqRf 207 (211)
T COG2910 150 TFVSPAAFFEPGERTGNYRL--------GGDQLLVNAKGESRISYADYAIAVLDELEKPQHIRQRF 207 (211)
T ss_pred EEeCcHHhcCCccccCceEe--------ccceEEEcCCCceeeeHHHHHHHHHHHHhcccccceee
Confidence 99999999999765432211 12222234445679999999999999998876544 44
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0071 Score=48.77 Aligned_cols=108 Identities=16% Similarity=0.037 Sum_probs=67.2
Q ss_pred chhHhHHHHHHHHHHHhc--------C---CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA--------K---VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVA 70 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~--------~---v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~ 70 (239)
+++|+.++.++++++... + ..++|++||.++..+. .....|+.+|...
T Consensus 117 ~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asKaal 175 (306)
T PRK07792 117 IAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGP---------------------VGQANYGAAKAGI 175 (306)
T ss_pred HHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCC---------------------CCCchHHHHHHHH
Confidence 578999999999887521 0 1489999995332211 1135699999999
Q ss_pred HHHHHHHHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 71 EKAAWEEAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 71 E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
+.+.+.++.+ .|+++..+.|+. ..... ........ .........+..+|++.++.+++..
T Consensus 176 ~~l~~~la~e~~~~gI~vn~i~Pg~--~t~~~----------~~~~~~~~-~~~~~~~~~~~pe~va~~v~~L~s~ 238 (306)
T PRK07792 176 TALTLSAARALGRYGVRANAICPRA--RTAMT----------ADVFGDAP-DVEAGGIDPLSPEHVVPLVQFLASP 238 (306)
T ss_pred HHHHHHHHHHhhhcCeEEEEECCCC--CCchh----------hhhccccc-hhhhhccCCCCHHHHHHHHHHHcCc
Confidence 9998887764 578888888862 11110 00000000 0001123345789999999887754
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0067 Score=51.70 Aligned_cols=112 Identities=17% Similarity=0.083 Sum_probs=70.8
Q ss_pred chhHhHHHHHHHHHHHhcCC----CEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKV----RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v----~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++.+++..... .++|++||.+++++.. ....|+.+|...+.+++.+
T Consensus 312 ~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~---------------------~~~~Y~asKaal~~~~~~l 370 (450)
T PRK08261 312 LAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNR---------------------GQTNYAASKAGVIGLVQAL 370 (450)
T ss_pred HHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCC---------------------CChHHHHHHHHHHHHHHHH
Confidence 57899999999999977432 6899999964444321 2467999999888777776
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
+.+ .|+.+..+.|+.+-.+... ... .......+.. ..+ ...--.+|+++++.+++..
T Consensus 371 a~el~~~gi~v~~v~PG~i~t~~~~-~~~---~~~~~~~~~~-~~l----~~~~~p~dva~~~~~l~s~ 430 (450)
T PRK08261 371 APLLAERGITINAVAPGFIETQMTA-AIP---FATREAGRRM-NSL----QQGGLPVDVAETIAWLASP 430 (450)
T ss_pred HHHHhhhCcEEEEEEeCcCcchhhh-ccc---hhHHHHHhhc-CCc----CCCCCHHHHHHHHHHHhCh
Confidence 543 4889999999987432111 111 0111111110 001 1122357999999988863
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0012 Score=51.93 Aligned_cols=72 Identities=18% Similarity=0.069 Sum_probs=55.1
Q ss_pred chhHhHHHHHHHHHHHhc----CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..+++++.+. +-.++|++||.++..+. .....|+.+|...+.+++.+
T Consensus 114 ~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~~sK~a~~~l~~~l 172 (266)
T PRK06171 114 FNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGS---------------------EGQSCYAATKAALNSFTRSW 172 (266)
T ss_pred HhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCC---------------------CCCchhHHHHHHHHHHHHHH
Confidence 568999999999888753 34579999996332211 12467999999999999888
Q ss_pred HHH---cCccEEEEecCccc
Q 026418 78 AVA---RGVDLVVVNPVLVL 94 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~ 94 (239)
+.+ .|+++..++|+.+-
T Consensus 173 a~e~~~~gi~v~~v~pG~~~ 192 (266)
T PRK06171 173 AKELGKHNIRVVGVAPGILE 192 (266)
T ss_pred HHHhhhcCeEEEEEeccccc
Confidence 765 48999999999884
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0072 Score=48.93 Aligned_cols=142 Identities=13% Similarity=0.031 Sum_probs=75.3
Q ss_pred chhHhHHHHHHHHHHH----hcC--CCEEEEccchhhhccCC-CCCCCccccCCCC------------CChhhcccCCch
Q 026418 2 VEPAVIGTKNVIVAAA----EAK--VRRVVFTSSIGAVYMDP-NRSPDDVVDESCW------------SDLEFCKNTKNW 62 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~--v~~~i~~Ss~~~vy~~~-~~~~~~~~~E~~~------------~~~~~~~~~~~~ 62 (239)
+++|+.++..+++++. +.+ ..++|++||. +.+... .+....+.+..+. .....+..+...
T Consensus 110 ~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (314)
T TIGR01289 110 VGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSI-TGNTNTLAGNVPPKANLGDLSGLAAGFKAPIAMIDGKEFKGAKA 188 (314)
T ss_pred HhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecC-ccccccCCCcCCCcccccccccccccCCCcccccCCCCcchhhh
Confidence 5789999877766553 332 3699999996 544221 0000000110100 000011234567
Q ss_pred HHHHHHHHHHHHHHHHHH----cCccEEEEecCcccCCCCCCCCChhH-HHHHHHHcCCCCccCCCCCCceehHHHHHHH
Q 026418 63 YCYGKAVAEKAAWEEAVA----RGVDLVVVNPVLVLGPLLQSTVNASI-IHILKYLNGSAKTYANSVQAYVHVRDVALAH 137 (239)
Q Consensus 63 Y~~sK~~~E~~~~~~~~~----~~~~~~i~Rp~~v~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~ 137 (239)
|+.||.+...+.+.++++ .|+.++.++||.|............. ..+..+.+.. ...+...++.++.+
T Consensus 189 Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~a~~l 261 (314)
T TIGR01289 189 YKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFRTLFPPFQKYI-------TKGYVSEEEAGERL 261 (314)
T ss_pred HHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHHHHHHHHHHHH-------hccccchhhhhhhh
Confidence 999999988888877664 36899999999985432211111111 1111111100 01246688888888
Q ss_pred HHhhcCCC--CCceEE
Q 026418 138 ILVYETPS--ASGRYL 151 (239)
Q Consensus 138 ~~~~~~~~--~~~~y~ 151 (239)
+.++.... ..|.|.
T Consensus 262 ~~~~~~~~~~~~g~~~ 277 (314)
T TIGR01289 262 AQVVSDPKLKKSGVYW 277 (314)
T ss_pred HHhhcCcccCCCceee
Confidence 88776432 234553
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0076 Score=47.07 Aligned_cols=115 Identities=10% Similarity=0.033 Sum_probs=74.2
Q ss_pred chhHhHHHHHHHHHHHhc----C-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----K-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++.++++++... + -.++|++||. ..+.... ....|+.+|.+.+.+.+.
T Consensus 113 ~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~-~~~~~~~--------------------~~~~Y~~sKaa~~~~~~~ 171 (253)
T PRK08993 113 MNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASM-LSFQGGI--------------------RVPSYTASKSGVMGVTRL 171 (253)
T ss_pred HhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECch-hhccCCC--------------------CCcchHHHHHHHHHHHHH
Confidence 578999999999887542 2 2579999995 5442211 134699999999998888
Q ss_pred HHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 77 ~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
++.+ .|+++..++||.+-.+.... ..........+... .+. .-+.-.+|+++.++.++...
T Consensus 172 la~e~~~~gi~v~~v~pG~v~T~~~~~-~~~~~~~~~~~~~~----~p~--~r~~~p~eva~~~~~l~s~~ 235 (253)
T PRK08993 172 MANEWAKHNINVNAIAPGYMATNNTQQ-LRADEQRSAEILDR----IPA--GRWGLPSDLMGPVVFLASSA 235 (253)
T ss_pred HHHHhhhhCeEEEEEeeCcccCcchhh-hccchHHHHHHHhc----CCC--CCCcCHHHHHHHHHHHhCcc
Confidence 8665 48999999999996543211 00000111122211 111 22566899999999988643
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0079 Score=47.61 Aligned_cols=109 Identities=16% Similarity=0.105 Sum_probs=71.0
Q ss_pred chhHhHHHHHHHHHHHhc----CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++... +-.++|++||. ... ... + ..+...|+.+|.+.|.+++.+
T Consensus 118 ~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~-~~~--~~~----------~------~~~~~~Y~~sK~a~~~~~~~l 178 (273)
T PRK08278 118 QQINVRGTFLVSQACLPHLKKSENPHILTLSPP-LNL--DPK----------W------FAPHTAYTMAKYGMSLCTLGL 178 (273)
T ss_pred HHHhchHHHHHHHHHHHHHHhcCCCEEEEECCc-hhc--ccc----------c------cCCcchhHHHHHHHHHHHHHH
Confidence 578999999999999642 23578888884 211 000 0 023567999999999999988
Q ss_pred HHHc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
+.+. ++++..+.|+.++... .......+.. ....+...+|+|++++.++...
T Consensus 179 a~el~~~~I~v~~i~Pg~~i~t~----------~~~~~~~~~~-----~~~~~~~p~~va~~~~~l~~~~ 233 (273)
T PRK08278 179 AEEFRDDGIAVNALWPRTTIATA----------AVRNLLGGDE-----AMRRSRTPEIMADAAYEILSRP 233 (273)
T ss_pred HHHhhhcCcEEEEEeCCCccccH----------HHHhcccccc-----cccccCCHHHHHHHHHHHhcCc
Confidence 7764 7899999998433211 1111111111 1123567899999999988754
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0068 Score=47.53 Aligned_cols=115 Identities=14% Similarity=-0.039 Sum_probs=69.0
Q ss_pred chhHhHHHHHHHHHH----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.+...+.+++ ++.+..++|++||.++..+. .....|+.+|...+.+++.+
T Consensus 121 ~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asK~a~~~~~~~l 179 (260)
T PRK08416 121 YTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYI---------------------ENYAGHGTSKAAVETMVKYA 179 (260)
T ss_pred HhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCC---------------------CCcccchhhHHHHHHHHHHH
Confidence 456666655554444 44444689999995221100 11356999999999999998
Q ss_pred HHHc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
+.+. |+++..+.||.+--+.... ...............+ ...+...+|++.++++++...
T Consensus 180 a~el~~~gi~v~~v~PG~i~T~~~~~-~~~~~~~~~~~~~~~~------~~r~~~p~~va~~~~~l~~~~ 242 (260)
T PRK08416 180 ATELGEKNIRVNAVSGGPIDTDALKA-FTNYEEVKAKTEELSP------LNRMGQPEDLAGACLFLCSEK 242 (260)
T ss_pred HHHhhhhCeEEEEEeeCcccChhhhh-ccCCHHHHHHHHhcCC------CCCCCCHHHHHHHHHHHcChh
Confidence 8764 8999999998874432110 0000111111111111 123667899999999988643
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0081 Score=47.93 Aligned_cols=109 Identities=14% Similarity=0.080 Sum_probs=69.8
Q ss_pred chhHhHHHHHHHHHHHh----cC------CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AK------VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAE 71 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~------v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E 71 (239)
+++|+.++..+++++.. .+ -.++|++||.++..+.. ....|+.+|.+.+
T Consensus 120 ~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~---------------------~~~~Y~asKaal~ 178 (286)
T PRK07791 120 IAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGSV---------------------GQGNYSAAKAGIA 178 (286)
T ss_pred HHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcCCC---------------------CchhhHHHHHHHH
Confidence 67899999888877742 11 14899999964433211 1456999999999
Q ss_pred HHHHHHHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 72 KAAWEEAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 72 ~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
.+.+.++.+ .|+++..+.|+ +.-+ . . ........... +.+...+...+|+++++++++..
T Consensus 179 ~l~~~la~el~~~gIrVn~v~Pg-~~T~-~----~--~~~~~~~~~~~----~~~~~~~~~pedva~~~~~L~s~ 241 (286)
T PRK07791 179 ALTLVAAAELGRYGVTVNAIAPA-ARTR-M----T--ETVFAEMMAKP----EEGEFDAMAPENVSPLVVWLGSA 241 (286)
T ss_pred HHHHHHHHHHHHhCeEEEEECCC-CCCC-c----c--hhhHHHHHhcC----cccccCCCCHHHHHHHHHHHhCc
Confidence 988887665 58999999997 4211 1 0 01111211111 11222356789999999998864
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0098 Score=47.99 Aligned_cols=134 Identities=13% Similarity=0.061 Sum_probs=69.5
Q ss_pred chhHhHHHHHHHHHHH----hcC--CCEEEEccchhhhccCCC-C--CCCcccc----------CC---CCCChhhcccC
Q 026418 2 VEPAVIGTKNVIVAAA----EAK--VRRVVFTSSIGAVYMDPN-R--SPDDVVD----------ES---CWSDLEFCKNT 59 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~--v~~~i~~Ss~~~vy~~~~-~--~~~~~~~----------E~---~~~~~~~~~~~ 59 (239)
+++|+.|+..+++++. +.+ ..++|++||. +.+-... . .+..... +. .+.+.. ...+
T Consensus 104 ~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 181 (308)
T PLN00015 104 VGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSI-TGNTNTLAGNVPPKANLGDLRGLAGGLNGLNSSAMIDGG-EFDG 181 (308)
T ss_pred HHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEecc-ccccccccccCCCccchhhhhhhhcccCCccchhhcccc-CCcH
Confidence 5789999777766553 333 3689999996 3321100 0 0000000 00 000000 0123
Q ss_pred CchHHHHHHHHHHHHHHHHHH----cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHH
Q 026418 60 KNWYCYGKAVAEKAAWEEAVA----RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVAL 135 (239)
Q Consensus 60 ~~~Y~~sK~~~E~~~~~~~~~----~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ 135 (239)
...|+.||.+.+...+.++++ .|+.++.++||.|...............+...... ++. ..+...++.|+
T Consensus 182 ~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~~~~~~----~~~--~~~~~pe~~a~ 255 (308)
T PLN00015 182 AKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLFPPFQK----YIT--KGYVSEEEAGK 255 (308)
T ss_pred HHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHHHHHHHHHHH----HHh--cccccHHHhhh
Confidence 466999999977776777664 37899999999996433211111111100000000 000 11456789999
Q ss_pred HHHHhhcC
Q 026418 136 AHILVYET 143 (239)
Q Consensus 136 ~~~~~~~~ 143 (239)
.++.++..
T Consensus 256 ~~~~l~~~ 263 (308)
T PLN00015 256 RLAQVVSD 263 (308)
T ss_pred hhhhhccc
Confidence 88887754
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.011 Score=46.76 Aligned_cols=136 Identities=15% Similarity=0.118 Sum_probs=74.4
Q ss_pred chhHhHHHHHHHHHHHhc--CCCEEEEccchhhhccCCCC-CCCcc---ccCCCCCChhh--cc---cCCchHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNR-SPDDV---VDESCWSDLEF--CK---NTKNWYCYGKAVA 70 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~--~v~~~i~~Ss~~~vy~~~~~-~~~~~---~~E~~~~~~~~--~~---~~~~~Y~~sK~~~ 70 (239)
+++|+.++.++++++.+. .-.+.|++||.++....... ..... .+.++...... +. .+...|+.||...
T Consensus 97 ~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~ 176 (275)
T PRK06940 97 LKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQPDAIEDSLHAYQIAKRAN 176 (275)
T ss_pred HHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhccccccccccccccccccccccCCccchhHHHHHHH
Confidence 679999999999988653 11346777775444321000 00000 11110000000 00 1246799999999
Q ss_pred HHHHHHHHHH---cCccEEEEecCcccCCCCCCCCCh-hHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 71 EKAAWEEAVA---RGVDLVVVNPVLVLGPLLQSTVNA-SIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 71 E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
+.+.+.++.+ .|+++..+.||.+-.+........ .......+.... + ...+...+|+|+++.+++..
T Consensus 177 ~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~----p--~~r~~~peeia~~~~fL~s~ 247 (275)
T PRK06940 177 ALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKS----P--AGRPGTPDEIAALAEFLMGP 247 (275)
T ss_pred HHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhC----C--cccCCCHHHHHHHHHHHcCc
Confidence 9888877664 479999999999876532110000 001111222111 1 12367789999999998853
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.011 Score=51.40 Aligned_cols=115 Identities=14% Similarity=0.055 Sum_probs=72.4
Q ss_pred chhHhHHHHHHHHHHHhc----CC-CEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----KV-RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----~v-~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++..+++++... +- .++|++||.++..+. .....|+.+|...+.+.+.
T Consensus 109 ~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~---------------------~~~~~Y~asKaal~~l~~~ 167 (520)
T PRK06484 109 QAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVAL---------------------PKRTAYSASKAAVISLTRS 167 (520)
T ss_pred HHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCC---------------------CCCchHHHHHHHHHHHHHH
Confidence 578999999999888653 32 389999996333211 1135799999999999888
Q ss_pred HHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 77 ~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
++.+ .+++++.+.|+.+-.+................... .+ ...+...+|+++++.+++..
T Consensus 168 la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~~~va~~v~~l~~~ 231 (520)
T PRK06484 168 LACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSR----IP--LGRLGRPEEIAEAVFFLASD 231 (520)
T ss_pred HHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhc----CC--CCCCcCHHHHHHHHHHHhCc
Confidence 7665 47999999999885543211000000000111111 11 12256789999999988764
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.022 Score=44.49 Aligned_cols=114 Identities=11% Similarity=0.012 Sum_probs=73.5
Q ss_pred chhHhHHHHHHHHHHHhcC--CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~--v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++..+.+++...- -.++|++||.++..+ . .....|+.+|...+.+.+.++.
T Consensus 115 ~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~---------~------------~~~~~Y~asKaal~~l~~~la~ 173 (252)
T PRK06079 115 QDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERA---------I------------PNYNVMGIAKAALESSVRYLAR 173 (252)
T ss_pred hCcccHHHHHHHHHHHHhcccCceEEEEeccCcccc---------C------------CcchhhHHHHHHHHHHHHHHHH
Confidence 5789999888888876531 257999998522111 0 1145699999999999988876
Q ss_pred H---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 80 A---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 80 ~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
+ .|+++..+.||.+-.+..... .........+.. .. + ...+...+|+|+++.+++..
T Consensus 174 el~~~gI~vn~i~PG~v~T~~~~~~-~~~~~~~~~~~~-~~---p--~~r~~~pedva~~~~~l~s~ 233 (252)
T PRK06079 174 DLGKKGIRVNAISAGAVKTLAVTGI-KGHKDLLKESDS-RT---V--DGVGVTIEEVGNTAAFLLSD 233 (252)
T ss_pred HhhhcCcEEEEEecCcccccccccC-CChHHHHHHHHh-cC---c--ccCCCCHHHHHHHHHHHhCc
Confidence 5 489999999999965432111 011112222222 11 1 12366789999999998864
|
|
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.002 Score=46.69 Aligned_cols=70 Identities=19% Similarity=0.182 Sum_probs=52.3
Q ss_pred hhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHcC
Q 026418 3 EPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVARG 82 (239)
Q Consensus 3 ~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~ 82 (239)
.+.-+-...+.++|++.||++|+.+||. .. .. ...-.|-..|-..|+-+.++ +
T Consensus 105 kvDhDyvl~~A~~AKe~Gck~fvLvSS~-GA---d~-------------------sSrFlY~k~KGEvE~~v~eL----~ 157 (238)
T KOG4039|consen 105 KVDHDYVLQLAQAAKEKGCKTFVLVSSA-GA---DP-------------------SSRFLYMKMKGEVERDVIEL----D 157 (238)
T ss_pred eechHHHHHHHHHHHhCCCeEEEEEecc-CC---Cc-------------------ccceeeeeccchhhhhhhhc----c
Confidence 3344456778899999999999999995 21 11 23566889999999888665 4
Q ss_pred c-cEEEEecCcccCCCCC
Q 026418 83 V-DLVVVNPVLVLGPLLQ 99 (239)
Q Consensus 83 ~-~~~i~Rp~~v~G~~~~ 99 (239)
| .++|+|||.+.|....
T Consensus 158 F~~~~i~RPG~ll~~R~e 175 (238)
T KOG4039|consen 158 FKHIIILRPGPLLGERTE 175 (238)
T ss_pred ccEEEEecCcceeccccc
Confidence 5 6889999999996543
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0047 Score=48.34 Aligned_cols=114 Identities=19% Similarity=0.080 Sum_probs=69.5
Q ss_pred chhHhHHHHHHHHHHHhc-----C-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA-----K-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAW 75 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~-----~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~ 75 (239)
+++|+.++..+.+++.+. + -.++|++||.++..+. .....|+.+|...+.+.+
T Consensus 118 ~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~---------------------~~~~~Y~asKaal~~l~~ 176 (256)
T TIGR01500 118 WALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPF---------------------KGWALYCAGKAARDMLFQ 176 (256)
T ss_pred HHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCC---------------------CCchHHHHHHHHHHHHHH
Confidence 578999988777666432 2 2589999996332110 124579999999999999
Q ss_pred HHHHH---cCccEEEEecCcccCCCCCCCC--ChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhc
Q 026418 76 EEAVA---RGVDLVVVNPVLVLGPLLQSTV--NASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYE 142 (239)
Q Consensus 76 ~~~~~---~~~~~~i~Rp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~ 142 (239)
.++.+ .|+.+..+.||.+-.+...... ..... +...+... .+ ...+...+|+|.+++.++.
T Consensus 177 ~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~-~~~~~~~~---~~--~~~~~~p~eva~~~~~l~~ 242 (256)
T TIGR01500 177 VLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPD-MRKGLQEL---KA--KGKLVDPKVSAQKLLSLLE 242 (256)
T ss_pred HHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChh-HHHHHHHH---Hh--cCCCCCHHHHHHHHHHHHh
Confidence 88765 4789999999988543110000 00000 00000000 01 1126678999999999885
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.022 Score=44.77 Aligned_cols=115 Identities=14% Similarity=0.025 Sum_probs=70.9
Q ss_pred chhHhHHHHHHHHHHHhc---CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA---KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA 78 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~---~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~ 78 (239)
+++|+.++..+.+++... +-.++|++||.++..+. .....|+.+|...+.+.+.++
T Consensus 117 ~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~~---------------------~~~~~Y~asKaal~~l~~~la 175 (261)
T PRK08690 117 HEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAI---------------------PNYNVMGMAKASLEAGIRFTA 175 (261)
T ss_pred HHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccCC---------------------CCcccchhHHHHHHHHHHHHH
Confidence 567888887777765431 12579999986332110 124569999999998888776
Q ss_pred HH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 79 VA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 79 ~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
.+ .|+++..+.||.+--+... ...........+.+..+ ...+...+|+|+++.+++...
T Consensus 176 ~e~~~~gIrVn~i~PG~v~T~~~~-~~~~~~~~~~~~~~~~p------~~r~~~peevA~~v~~l~s~~ 237 (261)
T PRK08690 176 ACLGKEGIRCNGISAGPIKTLAAS-GIADFGKLLGHVAAHNP------LRRNVTIEEVGNTAAFLLSDL 237 (261)
T ss_pred HHhhhcCeEEEEEecCcccchhhh-cCCchHHHHHHHhhcCC------CCCCCCHHHHHHHHHHHhCcc
Confidence 53 5899999999998554211 11000111112211111 123667899999999998743
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.014 Score=45.70 Aligned_cols=114 Identities=13% Similarity=0.061 Sum_probs=71.8
Q ss_pred chhHhHHHHHHHHHHHhc--CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~--~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++..+.+++... .-.++|++||.++..+ . .....|+.+|...+.+.+.++.
T Consensus 119 ~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~---------~------------~~~~~Y~asKaal~~l~~~la~ 177 (258)
T PRK07370 119 LEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRA---------I------------PNYNVMGVAKAALEASVRYLAA 177 (258)
T ss_pred heeeeHHHHHHHHHHHHHHhhCCeEEEEeccccccC---------C------------cccchhhHHHHHHHHHHHHHHH
Confidence 578999988888876532 1258999999622210 0 1245699999999999998876
Q ss_pred Hc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 80 AR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 80 ~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
+. |+++..+.||.+-.+.... ..........+.... + ...+...+|++.++.+++..
T Consensus 178 el~~~gI~Vn~i~PG~v~T~~~~~-~~~~~~~~~~~~~~~----p--~~r~~~~~dva~~~~fl~s~ 237 (258)
T PRK07370 178 ELGPKNIRVNAISAGPIRTLASSA-VGGILDMIHHVEEKA----P--LRRTVTQTEVGNTAAFLLSD 237 (258)
T ss_pred HhCcCCeEEEEEecCcccCchhhc-cccchhhhhhhhhcC----C--cCcCCCHHHHHHHHHHHhCh
Confidence 53 7899999999986542110 000011111111111 1 12356679999999998864
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.021 Score=44.80 Aligned_cols=114 Identities=11% Similarity=0.003 Sum_probs=72.1
Q ss_pred chhHhHHHHHHHHHHHhcC--CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~--v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++..+++++...- -.++|++||.++..+. .....|+.+|...+.+.+.++.
T Consensus 118 ~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~---------------------~~~~~Y~asKaal~~l~~~la~ 176 (260)
T PRK06603 118 LHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKVI---------------------PNYNVMGVAKAALEASVKYLAN 176 (260)
T ss_pred HHHHHHHHHHHHHHHHhhhccCceEEEEecCccccCC---------------------CcccchhhHHHHHHHHHHHHHH
Confidence 5789999999888764321 2589999996322110 1135699999999999888876
Q ss_pred H---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 80 A---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 80 ~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
+ .|+++..+.||.+-.+.... ..........+....+ ...+...+|+|+++.+++..
T Consensus 177 el~~~gIrVn~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~p------~~r~~~pedva~~~~~L~s~ 236 (260)
T PRK06603 177 DMGENNIRVNAISAGPIKTLASSA-IGDFSTMLKSHAATAP------LKRNTTQEDVGGAAVYLFSE 236 (260)
T ss_pred HhhhcCeEEEEEecCcCcchhhhc-CCCcHHHHHHHHhcCC------cCCCCCHHHHHHHHHHHhCc
Confidence 4 47999999999885442110 0000111112221111 12356789999999999864
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.032 Score=44.14 Aligned_cols=114 Identities=12% Similarity=0.070 Sum_probs=71.8
Q ss_pred chhHhHHHHHHHHHHHhc--CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~--~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++.++++++... .-.++|++||.++..+. .....|+.+|...+.+.+.++.
T Consensus 117 ~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~~---------------------~~~~~Y~asKaAl~~l~r~la~ 175 (271)
T PRK06505 117 MVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRVM---------------------PNYNVMGVAKAALEASVRYLAA 175 (271)
T ss_pred HhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccccC---------------------CccchhhhhHHHHHHHHHHHHH
Confidence 578999998888877532 11579999996332110 1135699999999999988877
Q ss_pred H---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 80 A---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 80 ~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
+ .|+++..+.||.+-.+.... ... ............ +. .-+...+|+|+++++++..
T Consensus 176 el~~~gIrVn~v~PG~i~T~~~~~-~~~-~~~~~~~~~~~~---p~--~r~~~peeva~~~~fL~s~ 235 (271)
T PRK06505 176 DYGPQGIRVNAISAGPVRTLAGAG-IGD-ARAIFSYQQRNS---PL--RRTVTIDEVGGSALYLLSD 235 (271)
T ss_pred HHhhcCeEEEEEecCCcccccccc-Ccc-hHHHHHHHhhcC---Cc--cccCCHHHHHHHHHHHhCc
Confidence 6 47999999999986543211 100 011111111111 11 1245689999999998864
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.006 Score=53.53 Aligned_cols=121 Identities=15% Similarity=0.037 Sum_probs=72.9
Q ss_pred chhHhHHHHHHHHHHH----hcC-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.|+.++++++. +.+ -.++|++||. +.|... .....|+.+|.+.+.+.+.
T Consensus 420 ~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~-~~~~~~--------------------~~~~~Y~~sKaa~~~~~~~ 478 (582)
T PRK05855 420 LDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASA-AAYAPS--------------------RSLPAYATSKAAVLMLSEC 478 (582)
T ss_pred HHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECCh-hhccCC--------------------CCCcHHHHHHHHHHHHHHH
Confidence 5789999999888764 333 2589999995 655321 1246799999999988887
Q ss_pred HHHH---cCccEEEEecCcccCCCCCCCCC-hhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC
Q 026418 77 EAVA---RGVDLVVVNPVLVLGPLLQSTVN-ASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS 145 (239)
Q Consensus 77 ~~~~---~~~~~~i~Rp~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 145 (239)
++.+ .|++++.+.||.+-.+....... .................. ....+..+|+|++++.++.+..
T Consensus 479 l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~~va~~~~~~~~~~~ 549 (582)
T PRK05855 479 LRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLY--QRRGYGPEKVAKAIVDAVKRNK 549 (582)
T ss_pred HHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhc--cccCCCHHHHHHHHHHHHHcCC
Confidence 7654 48999999999885442211100 000000000000000000 0112457999999999998653
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.037 Score=43.47 Aligned_cols=114 Identities=13% Similarity=0.033 Sum_probs=72.3
Q ss_pred chhHhHHHHHHHHHHHhc--CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~--~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++..+.+++... +-.++|++||.++..+ . .....|+.+|...+.+.+.++.
T Consensus 117 ~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~---------~------------~~~~~Y~asKaal~~l~~~la~ 175 (260)
T PRK06997 117 HDISAYSFPALAKAALPMLSDDASLLTLSYLGAERV---------V------------PNYNTMGLAKASLEASVRYLAV 175 (260)
T ss_pred HHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccC---------C------------CCcchHHHHHHHHHHHHHHHHH
Confidence 678999998888887653 1257999999632111 0 1135699999999999998876
Q ss_pred H---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 80 A---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 80 ~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
+ .|+++..+.||.+-.+... ...........+.... + ...+...+|+++++.+++..
T Consensus 176 el~~~gIrVn~i~PG~v~T~~~~-~~~~~~~~~~~~~~~~----p--~~r~~~pedva~~~~~l~s~ 235 (260)
T PRK06997 176 SLGPKGIRANGISAGPIKTLAAS-GIKDFGKILDFVESNA----P--LRRNVTIEEVGNVAAFLLSD 235 (260)
T ss_pred HhcccCeEEEEEeeCccccchhc-cccchhhHHHHHHhcC----c--ccccCCHHHHHHHHHHHhCc
Confidence 5 4789999999988543211 0000001111111111 1 12356789999999998864
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0051 Score=48.28 Aligned_cols=116 Identities=17% Similarity=0.050 Sum_probs=72.6
Q ss_pred chhHhHHHHHHHHHHHhcC---CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK---VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA 78 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~---v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~ 78 (239)
+++|+.++..+++++.+.- -.++|++||..+.++. .....|+.+|...+.+.+.++
T Consensus 112 ~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~---------------------~~~~~Y~~sKaa~~~l~~~la 170 (262)
T TIGR03325 112 FHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPN---------------------GGGPLYTAAKHAVVGLVKELA 170 (262)
T ss_pred heeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCC---------------------CCCchhHHHHHHHHHHHHHHH
Confidence 6789999999999986531 2468888885333211 123569999999999999998
Q ss_pred HHcC--ccEEEEecCcccCCCCCCCCC-hhHH-----HHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 79 VARG--VDLVVVNPVLVLGPLLQSTVN-ASII-----HILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 79 ~~~~--~~~~i~Rp~~v~G~~~~~~~~-~~~~-----~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
.+.+ +++..+.||.+..+....... .... ......+... + ...+...+|+|+++++++..
T Consensus 171 ~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---p--~~r~~~p~eva~~~~~l~s~ 238 (262)
T TIGR03325 171 FELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVL---P--IGRMPDAEEYTGAYVFFATR 238 (262)
T ss_pred HhhccCeEEEEEecCCCcCCCccccccccccccccccchhhhhhhcC---C--CCCCCChHHhhhheeeeecC
Confidence 7743 778889999987553211000 0000 0111111111 1 12356688999999888764
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.023 Score=44.52 Aligned_cols=114 Identities=11% Similarity=0.022 Sum_probs=70.8
Q ss_pred chhHhHHHHHHHHHHHhcC--CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~--v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++..+++++...= -.++|++||.++..+. .....|+.+|...+.+.+.++.
T Consensus 119 ~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~---------------------~~~~~Y~asKaal~~l~~~la~ 177 (257)
T PRK08594 119 QNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVV---------------------QNYNVMGVAKASLEASVKYLAN 177 (257)
T ss_pred HhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccCC---------------------CCCchhHHHHHHHHHHHHHHHH
Confidence 5678888888777765421 2589999996332110 1135699999999999988876
Q ss_pred H---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 80 A---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 80 ~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
+ .|+++..+.||.+-.+.... ..........+.. .. + ...+...+|+++++++++..
T Consensus 178 el~~~gIrvn~v~PG~v~T~~~~~-~~~~~~~~~~~~~-~~---p--~~r~~~p~~va~~~~~l~s~ 237 (257)
T PRK08594 178 DLGKDGIRVNAISAGPIRTLSAKG-VGGFNSILKEIEE-RA---P--LRRTTTQEEVGDTAAFLFSD 237 (257)
T ss_pred HhhhcCCEEeeeecCcccCHhHhh-hccccHHHHHHhh-cC---C--ccccCCHHHHHHHHHHHcCc
Confidence 4 37999999999886542110 0000011111111 11 1 12356789999999998864
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0065 Score=48.14 Aligned_cols=69 Identities=25% Similarity=0.247 Sum_probs=51.0
Q ss_pred CchhHhHHHHHHHHHH----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 1 MVEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 1 ~~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
++++|+.|+..+.++. +++. .|+|++||+++ ... .....+|+.||.+.|.....
T Consensus 134 ~l~vNllG~irvT~~~lpLlr~ar-GRvVnvsS~~G---R~~------------------~p~~g~Y~~SK~aVeaf~D~ 191 (322)
T KOG1610|consen 134 VLNVNLLGTIRVTKAFLPLLRRAR-GRVVNVSSVLG---RVA------------------LPALGPYCVSKFAVEAFSDS 191 (322)
T ss_pred HHhhhhhhHHHHHHHHHHHHHhcc-CeEEEeccccc---Ccc------------------CcccccchhhHHHHHHHHHH
Confidence 3678999888777766 4444 69999999722 111 01367899999999988766
Q ss_pred HHH---HcCccEEEEecC
Q 026418 77 EAV---ARGVDLVVVNPV 91 (239)
Q Consensus 77 ~~~---~~~~~~~i~Rp~ 91 (239)
..+ .+|++++++-||
T Consensus 192 lR~EL~~fGV~VsiiePG 209 (322)
T KOG1610|consen 192 LRRELRPFGVKVSIIEPG 209 (322)
T ss_pred HHHHHHhcCcEEEEeccC
Confidence 654 469999999999
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.033 Score=43.64 Aligned_cols=114 Identities=14% Similarity=0.078 Sum_probs=72.3
Q ss_pred chhHhHHHHHHHHHHHhcC--CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~--v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++..+.+++...= -.++|++||.++.. +. .....|+.+|...+.+.+.++.
T Consensus 120 ~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~---------~~------------~~~~~Y~asKaal~~l~~~la~ 178 (258)
T PRK07533 120 MDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEK---------VV------------ENYNLMGPVKAALESSVRYLAA 178 (258)
T ss_pred HhhhhHHHHHHHHHHHHHhccCCEEEEEecccccc---------CC------------ccchhhHHHHHHHHHHHHHHHH
Confidence 6789999999988875431 14789998852211 00 1135699999999998888766
Q ss_pred H---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 80 A---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 80 ~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
+ .|+++..+.|+.+-.+.... ...............+ ...+...+|++.++++++..
T Consensus 179 el~~~gI~Vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~p------~~r~~~p~dva~~~~~L~s~ 238 (258)
T PRK07533 179 ELGPKGIRVHAISPGPLKTRAASG-IDDFDALLEDAAERAP------LRRLVDIDDVGAVAAFLASD 238 (258)
T ss_pred HhhhcCcEEEEEecCCcCChhhhc-cCCcHHHHHHHHhcCC------cCCCCCHHHHHHHHHHHhCh
Confidence 5 47999999999886542111 0000111222222111 12356789999999998864
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.044 Score=42.88 Aligned_cols=115 Identities=16% Similarity=0.015 Sum_probs=70.5
Q ss_pred chhHhHHHHHHHHHH----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.+...+++++ ++.+-.++|++||..+.. + ......|+.+|...+.+.+.+
T Consensus 109 ~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~---------~------------~~~~~~y~ask~al~~~~~~l 167 (259)
T PRK06125 109 WELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGEN---------P------------DADYICGSAGNAALMAFTRAL 167 (259)
T ss_pred HHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccC---------C------------CCCchHhHHHHHHHHHHHHHH
Confidence 568999988888876 343345799999852211 0 012456899999999988887
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCC-------ChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTV-------NASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
+.+ .|+++..+.||.+..+...... ......+..+.... + ...+...+|+|+++++++..
T Consensus 168 a~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~~~~~va~~~~~l~~~ 237 (259)
T PRK06125 168 GGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGL----P--LGRPATPEEVADLVAFLASP 237 (259)
T ss_pred HHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccC----C--cCCCcCHHHHHHHHHHHcCc
Confidence 653 4899999999988654210000 00000111111111 1 12366889999999998864
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.011 Score=46.39 Aligned_cols=116 Identities=16% Similarity=0.003 Sum_probs=72.9
Q ss_pred chhHhHHHHHHHHHHHhc---CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA---KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA 78 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~---~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~ 78 (239)
+++|+.++..+++++.+. .-.++|++||. +.+... .....|+.+|...+.+++.++
T Consensus 113 ~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~-~~~~~~--------------------~~~~~Y~~sK~a~~~~~~~la 171 (263)
T PRK06200 113 FNVNVKGYLLGAKAALPALKASGGSMIFTLSN-SSFYPG--------------------GGGPLYTASKHAVVGLVRQLA 171 (263)
T ss_pred eeeccHhHHHHHHHHHHHHHhcCCEEEEECCh-hhcCCC--------------------CCCchhHHHHHHHHHHHHHHH
Confidence 568999988888888642 12579999996 433211 123569999999999999887
Q ss_pred HHc--CccEEEEecCcccCCCCCCCCC--------hhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 79 VAR--GVDLVVVNPVLVLGPLLQSTVN--------ASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 79 ~~~--~~~~~i~Rp~~v~G~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
.+. ++++..+.||.+.-+....... ..... ........ + ..-+...+|++.++.+++...
T Consensus 172 ~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---p--~~r~~~~~eva~~~~fl~s~~ 241 (263)
T PRK06200 172 YELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGL-ADMIAAIT---P--LQFAPQPEDHTGPYVLLASRR 241 (263)
T ss_pred HHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccch-hHHhhcCC---C--CCCCCCHHHHhhhhhheeccc
Confidence 754 4788899999886543211000 00000 11111111 1 123667899999999988643
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.063 Score=41.24 Aligned_cols=108 Identities=8% Similarity=-0.009 Sum_probs=70.1
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..+++++.. .+..+++++||..+.. . .+. ..+...|+.+|...+.+++.+
T Consensus 101 ~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~---~-------~~~--------~~~~~~Y~asK~a~~~~~~~l 162 (235)
T PRK09009 101 ITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSI---S-------DNR--------LGGWYSYRASKAALNMFLKTL 162 (235)
T ss_pred HHHHhHHHHHHHHHHHhhccccCCceEEEEeeccccc---c-------cCC--------CCCcchhhhhHHHHHHHHHHH
Confidence 46788888877777754 2346888888731111 0 000 013457999999999999888
Q ss_pred HHH-----cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 78 AVA-----RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 78 ~~~-----~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
+.+ .++.+..+.||.+..+.... +.... + ...+...+|+|++++.++...
T Consensus 163 a~e~~~~~~~i~v~~v~PG~v~t~~~~~-----------~~~~~----~--~~~~~~~~~~a~~~~~l~~~~ 217 (235)
T PRK09009 163 SIEWQRSLKHGVVLALHPGTTDTALSKP-----------FQQNV----P--KGKLFTPEYVAQCLLGIIANA 217 (235)
T ss_pred HHHhhcccCCeEEEEEcccceecCCCcc-----------hhhcc----c--cCCCCCHHHHHHHHHHHHHcC
Confidence 755 36788889999886553210 00111 1 122578899999999998764
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.014 Score=44.71 Aligned_cols=77 Identities=12% Similarity=0.006 Sum_probs=53.5
Q ss_pred chhHhHHHHHHHHHHHhc---CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA---KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA 78 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~---~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~ 78 (239)
+++|+.++..+++++... +...++++||. ++..... .. .+...|+.+|...+.+++.++
T Consensus 101 ~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~---~g~~~~~----~~-----------~~~~~Y~~sK~a~~~~~~~l~ 162 (225)
T PRK08177 101 FLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQ---LGSVELP----DG-----------GEMPLYKASKAALNSMTRSFV 162 (225)
T ss_pred eeeeeeHHHHHHHHHHHhhhhcCCEEEEEccC---ccccccC----CC-----------CCccchHHHHHHHHHHHHHHH
Confidence 567899999998888643 23578888874 2221100 00 123469999999999999887
Q ss_pred HH---cCccEEEEecCcccCC
Q 026418 79 VA---RGVDLVVVNPVLVLGP 96 (239)
Q Consensus 79 ~~---~~~~~~i~Rp~~v~G~ 96 (239)
++ .++.+..++||.+-.+
T Consensus 163 ~e~~~~~i~v~~i~PG~i~t~ 183 (225)
T PRK08177 163 AELGEPTLTVLSMHPGWVKTD 183 (225)
T ss_pred HHhhcCCeEEEEEcCCceecC
Confidence 65 3688999999988544
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.059 Score=42.26 Aligned_cols=111 Identities=17% Similarity=0.127 Sum_probs=72.2
Q ss_pred CchhHhHHHHHHHHHH----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 1 MVEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 1 ~~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
|+++|+.++..|-.+. .+.+-.++|.++|. +-|-..+ -...|+.||...-.+.+.
T Consensus 111 mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~-ag~~p~p--------------------~~avY~ATKa~v~~fSea 169 (265)
T COG0300 111 MIQLNILALTRLTKAVLPGMVERGAGHIINIGSA-AGLIPTP--------------------YMAVYSATKAFVLSFSEA 169 (265)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCceEEEEech-hhcCCCc--------------------chHHHHHHHHHHHHHHHH
Confidence 4688988877776655 44555789999997 4332111 146699999987655444
Q ss_pred HH---HHcCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC
Q 026418 77 EA---VARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS 145 (239)
Q Consensus 77 ~~---~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 145 (239)
+. +..|+.++.+-||.+.-.... .++.......-..-++..+|+|+..+.++.+.+
T Consensus 170 L~~EL~~~gV~V~~v~PG~~~T~f~~-------------~~~~~~~~~~~~~~~~~~~~va~~~~~~l~~~k 228 (265)
T COG0300 170 LREELKGTGVKVTAVCPGPTRTEFFD-------------AKGSDVYLLSPGELVLSPEDVAEAALKALEKGK 228 (265)
T ss_pred HHHHhcCCCeEEEEEecCcccccccc-------------ccccccccccchhhccCHHHHHHHHHHHHhcCC
Confidence 43 446899999999988654321 011111111123457889999999999998653
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.11 Score=41.91 Aligned_cols=114 Identities=9% Similarity=-0.017 Sum_probs=71.9
Q ss_pred chhHhHHHHHHHHHHHhc---CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA---KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA 78 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~---~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~ 78 (239)
+++|+.++..+++++... + .++|++||.++..+.+ .....|+.+|...+.+.+.++
T Consensus 150 ~~vN~~~~~~l~~~~~p~m~~~-G~II~isS~a~~~~~p--------------------~~~~~Y~asKaAl~~l~~~la 208 (303)
T PLN02730 150 ISASSYSFVSLLQHFGPIMNPG-GASISLTYIASERIIP--------------------GYGGGMSSAKAALESDTRVLA 208 (303)
T ss_pred HHHHhHHHHHHHHHHHHHHhcC-CEEEEEechhhcCCCC--------------------CCchhhHHHHHHHHHHHHHHH
Confidence 678999999888887553 2 5899999963322110 012369999999999998887
Q ss_pred HH----cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 79 VA----RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 79 ~~----~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
.+ .|+++..+-||.+--+.... ............... + ...+...+|++.++++++..
T Consensus 209 ~El~~~~gIrVn~V~PG~v~T~~~~~-~~~~~~~~~~~~~~~----p--l~r~~~peevA~~~~fLaS~ 270 (303)
T PLN02730 209 FEAGRKYKIRVNTISAGPLGSRAAKA-IGFIDDMIEYSYANA----P--LQKELTADEVGNAAAFLASP 270 (303)
T ss_pred HHhCcCCCeEEEEEeeCCccCchhhc-ccccHHHHHHHHhcC----C--CCCCcCHHHHHHHHHHHhCc
Confidence 75 36889999999886543211 100011111111111 1 12346789999999998863
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.013 Score=46.18 Aligned_cols=72 Identities=21% Similarity=0.110 Sum_probs=50.9
Q ss_pred CchhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 1 MVEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 1 ~~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
++++|+.|+..+.+++. +.+-.|+|.+||+++..+.+ ....|..||.+.+-+.+.
T Consensus 118 ~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P---------------------~~~~Y~ASK~Al~~f~et 176 (282)
T KOG1205|consen 118 VMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLP---------------------FRSIYSASKHALEGFFET 176 (282)
T ss_pred HhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCC---------------------cccccchHHHHHHHHHHH
Confidence 47899999998888874 33346899999974433211 124799999999999999
Q ss_pred HHHHcCccEEE----EecCcc
Q 026418 77 EAVARGVDLVV----VNPVLV 93 (239)
Q Consensus 77 ~~~~~~~~~~i----~Rp~~v 93 (239)
+..+.....++ +-||.|
T Consensus 177 LR~El~~~~~~i~i~V~PG~V 197 (282)
T KOG1205|consen 177 LRQELIPLGTIIIILVSPGPI 197 (282)
T ss_pred HHHHhhccCceEEEEEecCce
Confidence 88876554443 445544
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.024 Score=44.59 Aligned_cols=115 Identities=8% Similarity=0.028 Sum_probs=69.1
Q ss_pred chhHhHHHHHHH----HHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVI----VAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll----~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.+...+. ..+++.+..++|++||. +.+... .....|+.+|...+.+.+.+
T Consensus 113 ~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~-~~~~~~--------------------~~~~~y~asKaal~~l~~~l 171 (263)
T PRK08339 113 VKLLLYPAVYLTRALVPAMERKGFGRIIYSTSV-AIKEPI--------------------PNIALSNVVRISMAGLVRTL 171 (263)
T ss_pred HHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCc-cccCCC--------------------CcchhhHHHHHHHHHHHHHH
Confidence 467766655554 44455556789999996 432110 11356999999999988888
Q ss_pred HHHc---CccEEEEecCcccCCCCCCC-------CC-hhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 78 AVAR---GVDLVVVNPVLVLGPLLQST-------VN-ASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~~~~~-------~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
+.+. |+++..+.||.+-.+..... .. ........+.+.. + ...+...+|++.++.+++..
T Consensus 172 a~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----p--~~r~~~p~dva~~v~fL~s~ 242 (263)
T PRK08339 172 AKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPI----P--LGRLGEPEEIGYLVAFLASD 242 (263)
T ss_pred HHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccC----C--cccCcCHHHHHHHHHHHhcc
Confidence 7653 78999999999855421000 00 0001111111111 1 12356789999999998864
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.1 Score=41.11 Aligned_cols=114 Identities=13% Similarity=0.042 Sum_probs=70.2
Q ss_pred chhHhHHHHHHHHHHHhc--CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~--~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.+...+.+++... .-.++|++||.++.. +. .....|+.+|...+.+.+.++.
T Consensus 117 ~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~---------~~------------~~~~~Y~asKaal~~l~~~la~ 175 (262)
T PRK07984 117 HDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER---------AI------------PNYNVMGLAKASLEANVRYMAN 175 (262)
T ss_pred hhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCC---------CC------------CCcchhHHHHHHHHHHHHHHHH
Confidence 567888888888776432 125799999852211 00 1135699999999999998877
Q ss_pred H---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 80 A---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 80 ~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
+ .|+++..+-|+.+--+... ...........+.... + ...+...+|+++++++++..
T Consensus 176 el~~~gIrVn~i~PG~v~T~~~~-~~~~~~~~~~~~~~~~----p--~~r~~~pedva~~~~~L~s~ 235 (262)
T PRK07984 176 AMGPEGVRVNAISAGPIRTLAAS-GIKDFRKMLAHCEAVT----P--IRRTVTIEDVGNSAAFLCSD 235 (262)
T ss_pred HhcccCcEEeeeecCcccchHHh-cCCchHHHHHHHHHcC----C--CcCCCCHHHHHHHHHHHcCc
Confidence 5 4789999999988543110 0000001111111111 1 12366789999999998864
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.025 Score=44.84 Aligned_cols=115 Identities=17% Similarity=0.113 Sum_probs=71.6
Q ss_pred CchhHhHHHHHHHHHHHhcC--CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHH
Q 026418 1 MVEPAVIGTKNVIVAAAEAK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA 78 (239)
Q Consensus 1 ~~~~Nv~~t~~ll~a~~~~~--v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~ 78 (239)
++++|+.++..+.+++...= -.++|++||.++..+. .....|+.+|...+.+.+.++
T Consensus 114 ~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~---------------------~~~~~Y~asKaal~~l~~~la 172 (274)
T PRK08415 114 AMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKYV---------------------PHYNVMGVAKAALESSVRYLA 172 (274)
T ss_pred HhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccCC---------------------CcchhhhhHHHHHHHHHHHHH
Confidence 36889999988888776421 2579999996322110 113569999999999998887
Q ss_pred HH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 79 VA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 79 ~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
.+ .|+++..+.||.+-.+.... ... ........... .+ ..-+...+|+++++++++..
T Consensus 173 ~el~~~gIrVn~v~PG~v~T~~~~~-~~~-~~~~~~~~~~~---~p--l~r~~~pedva~~v~fL~s~ 233 (274)
T PRK08415 173 VDLGKKGIRVNAISAGPIKTLAASG-IGD-FRMILKWNEIN---AP--LKKNVSIEEVGNSGMYLLSD 233 (274)
T ss_pred HHhhhcCeEEEEEecCccccHHHhc-cch-hhHHhhhhhhh---Cc--hhccCCHHHHHHHHHHHhhh
Confidence 65 47899999999886532110 000 00011111101 01 11256789999999998864
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.3 Score=37.93 Aligned_cols=110 Identities=19% Similarity=0.148 Sum_probs=68.7
Q ss_pred hhHhHHHHHHHHH----HHhcC-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 3 EPAVIGTKNVIVA----AAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 3 ~~Nv~~t~~ll~a----~~~~~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
++|+.+...++.+ +.+.+ -.++|++||.++..+. .....|+.+|...+.+.+.+
T Consensus 106 ~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~---------------------~~~~~Y~asKaa~~~~~~~l 164 (246)
T PRK05599 106 TVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRAR---------------------RANYVYGSTKAGLDAFCQGL 164 (246)
T ss_pred HHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCC---------------------cCCcchhhHHHHHHHHHHHH
Confidence 4677666655544 34432 3689999996222110 12456999999999988887
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCceEEEe
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCA 153 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~ 153 (239)
+.+ .|+.+..+.||.+..+... +..+. + -....+|+|++++.++........+...
T Consensus 165 a~el~~~~I~v~~v~PG~v~T~~~~---------------~~~~~-~----~~~~pe~~a~~~~~~~~~~~~~~~~~~~ 223 (246)
T PRK05599 165 ADSLHGSHVRLIIARPGFVIGSMTT---------------GMKPA-P----MSVYPRDVAAAVVSAITSSKRSTTLWIP 223 (246)
T ss_pred HHHhcCCCceEEEecCCcccchhhc---------------CCCCC-C----CCCCHHHHHHHHHHHHhcCCCCceEEeC
Confidence 765 4788899999988654211 10000 0 0246799999999999865443344333
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.051 Score=42.61 Aligned_cols=117 Identities=11% Similarity=-0.033 Sum_probs=68.0
Q ss_pred chhHhHHHHHHHHHH----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.+...+++++ ++.+..++|++||. ..+... .....|+.+|...+.+.+.+
T Consensus 115 ~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~y~asKaal~~~~~~l 173 (265)
T PRK07062 115 LELKYFSVINPTRAFLPLLRASAAASIVCVNSL-LALQPE--------------------PHMVATSAARAGLLNLVKSL 173 (265)
T ss_pred HHHHhHHHHHHHHHHHHHHhccCCcEEEEeccc-cccCCC--------------------CCchHhHHHHHHHHHHHHHH
Confidence 456777666655554 44445789999996 322110 11356999999988888776
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCC------h-hHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVN------A-SIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~------~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
+.+ .|+++..++|+.+-.+....... . ............. .+ ...+...+|+|.++.+++..
T Consensus 174 a~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p--~~r~~~p~~va~~~~~L~s~ 245 (265)
T PRK07062 174 ATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKG--IP--LGRLGRPDEAARALFFLASP 245 (265)
T ss_pred HHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCC--CC--cCCCCCHHHHHHHHHHHhCc
Confidence 554 48999999999886543211000 0 0000011110010 11 12356789999999998864
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.13 Score=40.30 Aligned_cols=115 Identities=10% Similarity=-0.068 Sum_probs=66.8
Q ss_pred hhHhHHHHHH----HHHHH-hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 3 EPAVIGTKNV----IVAAA-EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 3 ~~Nv~~t~~l----l~a~~-~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
++|+.++..+ +..+. +.+-.++|++||. +..... .+...|+.+|...+.+.+.+
T Consensus 107 ~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~y~~sKaa~~~~~~~l 165 (259)
T PRK08340 107 LLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSV-SVKEPM--------------------PPLVLADVTRAGLVQLAKGV 165 (259)
T ss_pred hhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCc-ccCCCC--------------------CCchHHHHHHHHHHHHHHHH
Confidence 4566554443 33333 2334689999995 432110 12457999999999999988
Q ss_pred HHHc---CccEEEEecCcccCCCCCCCCC--------hhHH-HHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 78 AVAR---GVDLVVVNPVLVLGPLLQSTVN--------ASII-HILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~~~~~~~--------~~~~-~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
+.+. |+++..+.||.+-.+....... .... ....+.. . .+ ...+...+|+|+++.+++...
T Consensus 166 a~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~p--~~r~~~p~dva~~~~fL~s~~ 238 (259)
T PRK08340 166 SRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLE-R---TP--LKRTGRWEELGSLIAFLLSEN 238 (259)
T ss_pred HHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhc-c---CC--ccCCCCHHHHHHHHHHHcCcc
Confidence 8764 6888889999875543110000 0000 0011111 1 11 123667899999999988743
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.056 Score=42.80 Aligned_cols=116 Identities=13% Similarity=0.046 Sum_probs=72.6
Q ss_pred CchhHhHHHHHHHHHHHhc--CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHH
Q 026418 1 MVEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA 78 (239)
Q Consensus 1 ~~~~Nv~~t~~ll~a~~~~--~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~ 78 (239)
++++|+.++..+++++... +-.++|++||. +.... . .....|+.+|...+.+.+.++
T Consensus 119 ~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~-~~~~~---~-----------------p~~~~Y~asKaal~~l~~~la 177 (272)
T PRK08159 119 TMDISVYSFTAVAQRAEKLMTDGGSILTLTYY-GAEKV---M-----------------PHYNVMGVAKAALEASVKYLA 177 (272)
T ss_pred HHhHHHHHHHHHHHHHHHhcCCCceEEEEecc-ccccC---C-----------------CcchhhhhHHHHHHHHHHHHH
Confidence 3678999999999887653 12589999985 32100 0 113569999999999998887
Q ss_pred HH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 79 VA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 79 ~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
.+ .|+++..+.||.+-.+.... ... ............ +. ..+...+|+|+++++++...
T Consensus 178 ~el~~~gIrVn~v~PG~v~T~~~~~-~~~-~~~~~~~~~~~~---p~--~r~~~peevA~~~~~L~s~~ 239 (272)
T PRK08159 178 VDLGPKNIRVNAISAGPIKTLAASG-IGD-FRYILKWNEYNA---PL--RRTVTIEEVGDSALYLLSDL 239 (272)
T ss_pred HHhcccCeEEEEeecCCcCCHHHhc-CCc-chHHHHHHHhCC---cc--cccCCHHHHHHHHHHHhCcc
Confidence 65 47899999999885432110 000 001111111111 11 12567899999999998643
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.043 Score=39.64 Aligned_cols=58 Identities=19% Similarity=0.052 Sum_probs=46.3
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA 80 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 80 (239)
+++|+.+...+.+++...+-.++|++||.++..+. .....|+.+|...+.+.+.++++
T Consensus 108 ~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~---------------------~~~~~Y~askaal~~~~~~la~e 165 (167)
T PF00106_consen 108 FRVNLFGPFLLAKALLPQGGGKIVNISSIAGVRGS---------------------PGMSAYSASKAALRGLTQSLAAE 165 (167)
T ss_dssp HHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGTSSS---------------------TTBHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccceeeeeeehheeccccceEEecchhhccCC---------------------CCChhHHHHHHHHHHHHHHHHHh
Confidence 67899999999999988556899999997444321 12467999999999999988764
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.47 E-value=0.086 Score=40.34 Aligned_cols=97 Identities=10% Similarity=0.044 Sum_probs=68.3
Q ss_pred CchhHhHHHHHHHHHHHhc--CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHH
Q 026418 1 MVEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA 78 (239)
Q Consensus 1 ~~~~Nv~~t~~ll~a~~~~--~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~ 78 (239)
++++|+.++..+++++.+. .-.++|++||. + . .....|+.+|...+.+.+.++
T Consensus 101 ~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~-~----~--------------------~~~~~Y~asKaal~~~~~~la 155 (223)
T PRK05884 101 ALDATVLSAVLTVQSVGDHLRSGGSIISVVPE-N----P--------------------PAGSAEAAIKAALSNWTAGQA 155 (223)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCeEEEEecC-C----C--------------------CCccccHHHHHHHHHHHHHHH
Confidence 3688999999999998652 12589999995 3 0 013569999999999998887
Q ss_pred HH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 79 VA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 79 ~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
.+ .|+++..+.||.+..+. .... . . .+ .-..+|+++++.+++..
T Consensus 156 ~e~~~~gI~v~~v~PG~v~t~~-----------~~~~-~-~---~p-----~~~~~~ia~~~~~l~s~ 202 (223)
T PRK05884 156 AVFGTRGITINAVACGRSVQPG-----------YDGL-S-R---TP-----PPVAAEIARLALFLTTP 202 (223)
T ss_pred HHhhhcCeEEEEEecCccCchh-----------hhhc-c-C---CC-----CCCHHHHHHHHHHHcCc
Confidence 65 47899999999885331 0100 0 0 01 12679999999998764
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.066 Score=54.64 Aligned_cols=75 Identities=16% Similarity=0.154 Sum_probs=59.4
Q ss_pred CchhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHH
Q 026418 1 MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA 80 (239)
Q Consensus 1 ~~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 80 (239)
++++|+.|+.++++++.....+++|++||.++.+|.. ....|+.+|...+.+.+.++.+
T Consensus 2148 v~~~nv~G~~~Ll~al~~~~~~~IV~~SSvag~~G~~---------------------gqs~YaaAkaaL~~la~~la~~ 2206 (2582)
T TIGR02813 2148 VYGTKVDGLLSLLAALNAENIKLLALFSSAAGFYGNT---------------------GQSDYAMSNDILNKAALQLKAL 2206 (2582)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCCCC---------------------CcHHHHHHHHHHHHHHHHHHHH
Confidence 4689999999999999887778899999986666532 2467999999988888877765
Q ss_pred c-CccEEEEecCcccCC
Q 026418 81 R-GVDLVVVNPVLVLGP 96 (239)
Q Consensus 81 ~-~~~~~i~Rp~~v~G~ 96 (239)
. ++++..+.||.+-|.
T Consensus 2207 ~~~irV~sI~wG~wdtg 2223 (2582)
T TIGR02813 2207 NPSAKVMSFNWGPWDGG 2223 (2582)
T ss_pred cCCcEEEEEECCeecCC
Confidence 4 578888888876553
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.4 Score=37.52 Aligned_cols=115 Identities=13% Similarity=-0.010 Sum_probs=70.1
Q ss_pred chhHhHHHHHHHHHHHhc--CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~--~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++..+.+++... .-.++|++|+. ...+ . .....|+.+|...+.+.+.++.
T Consensus 117 ~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~-~~~~----~-----------------~~~~~Y~asKaal~~l~~~la~ 174 (256)
T PRK07889 117 LHVSAYSLKSLAKALLPLMNEGGSIVGLDFD-ATVA----W-----------------PAYDWMGVAKAALESTNRYLAR 174 (256)
T ss_pred HHHHhHHHHHHHHHHHHhcccCceEEEEeec-cccc----C-----------------CccchhHHHHHHHHHHHHHHHH
Confidence 578999998888877542 11468887763 2110 0 1135699999999999888766
Q ss_pred H---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 80 A---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 80 ~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
+ .|+++..+.||.+-.+.... ..........+....+ ..+.+...+|+|+++++++...
T Consensus 175 el~~~gIrvn~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~p-----~~~~~~~p~evA~~v~~l~s~~ 236 (256)
T PRK07889 175 DLGPRGIRVNLVAAGPIRTLAAKA-IPGFELLEEGWDERAP-----LGWDVKDPTPVARAVVALLSDW 236 (256)
T ss_pred HhhhcCeEEEeeccCcccChhhhc-ccCcHHHHHHHHhcCc-----cccccCCHHHHHHHHHHHhCcc
Confidence 5 47999999999886542111 0000011111111111 0113567899999999988743
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=94.97 E-value=0.09 Score=40.66 Aligned_cols=115 Identities=17% Similarity=0.110 Sum_probs=72.4
Q ss_pred chhHhHHHHHHHHHHHhc--CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~--~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.+...+++++.+. .-..+|++||. +..... .....|+.+|...+.+.+.++.
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~gsii~iss~-~~~~~~--------------------~~~~~y~~sKaal~~l~r~lA~ 163 (241)
T PF13561_consen 105 FDINVFSPFLLAQAALPLMKKGGSIINISSI-AAQRPM--------------------PGYSAYSASKAALEGLTRSLAK 163 (241)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHEEEEEEEEEG-GGTSBS--------------------TTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCcccccch-hhcccC--------------------ccchhhHHHHHHHHHHHHHHHH
Confidence 567888888888887442 12579999995 322111 1245799999999999888766
Q ss_pred H----cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 80 A----RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 80 ~----~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
+ .|+++-.+.||.+..+.... ..........+....+ ...+...+|+|.++.+++...
T Consensus 164 el~~~~gIrVN~V~pG~i~t~~~~~-~~~~~~~~~~~~~~~p------l~r~~~~~evA~~v~fL~s~~ 225 (241)
T PF13561_consen 164 ELAPKKGIRVNAVSPGPIETPMTER-IPGNEEFLEELKKRIP------LGRLGTPEEVANAVLFLASDA 225 (241)
T ss_dssp HHGGHGTEEEEEEEESSBSSHHHHH-HHTHHHHHHHHHHHST------TSSHBEHHHHHHHHHHHHSGG
T ss_pred HhccccCeeeeeecccceeccchhc-cccccchhhhhhhhhc------cCCCcCHHHHHHHHHHHhCcc
Confidence 4 47889999999886442100 0000111222222222 133568999999999998743
|
... |
| >PF08732 HIM1: HIM1; InterPro: IPR014843 HIM1 (high induction of mutagenesis protein 1) plays a role in the control of spontaneous and induced mutagenesis [] | Back alignment and domain information |
|---|
Probab=94.89 E-value=0.084 Score=43.33 Aligned_cols=68 Identities=16% Similarity=0.120 Sum_probs=47.7
Q ss_pred HHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHcCccE
Q 026418 10 KNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVARGVDL 85 (239)
Q Consensus 10 ~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 85 (239)
.+|+++.. +.+.+++|.++|+.. .. .....+|-+.|..-|+-+.......=-..
T Consensus 234 l~laq~f~~~~~~~~~K~~vIvTSfn~-----~~-----------------~s~~f~Yfk~K~~LE~dl~~~l~~~l~~l 291 (410)
T PF08732_consen 234 LDLAQTFANDIKNTGNKKLVIVTSFNN-----NA-----------------ISSMFPYFKTKGELENDLQNLLPPKLKHL 291 (410)
T ss_pred HHHHHHhhhhhccCCCceEEEEEecCc-----ch-----------------hhhhhhhhHHHHHHHHHHHhhcccccceE
Confidence 34444444 566899999999711 10 12357899999999999877643211368
Q ss_pred EEEecCcccCCCCC
Q 026418 86 VVVNPVLVLGPLLQ 99 (239)
Q Consensus 86 ~i~Rp~~v~G~~~~ 99 (239)
+|+|||-+.|.+.+
T Consensus 292 vILRPGplvG~h~~ 305 (410)
T PF08732_consen 292 VILRPGPLVGEHGS 305 (410)
T ss_pred EEecCccccCCCCC
Confidence 99999999997655
|
It is thought to participate in the control of processing of mutational intermediates appearing during error-prone bypass of DNA damage. |
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.80 E-value=0.2 Score=40.43 Aligned_cols=120 Identities=15% Similarity=0.052 Sum_probs=67.8
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..+++++.+ .+-.++|++||..+.++... ......|+.+|.....+.+.+
T Consensus 128 ~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~~~~~------------------~~~~~~Y~asKaal~~lt~~L 189 (305)
T PRK08303 128 LRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEYNATH------------------YRLSVFYDLAKTSVNRLAFSL 189 (305)
T ss_pred HHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccccccCcC------------------CCCcchhHHHHHHHHHHHHHH
Confidence 46788888777766643 22358999998423221100 012346999999999998877
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
+.+ .|+++..+.||.+--+............+..... . .+. ..-+...+|+|.++++++...
T Consensus 190 a~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~-~---~p~-~~~~~~peevA~~v~fL~s~~ 254 (305)
T PRK08303 190 AHELAPHGATAVALTPGWLRSEMMLDAFGVTEENWRDALA-K---EPH-FAISETPRYVGRAVAALAADP 254 (305)
T ss_pred HHHhhhcCcEEEEecCCccccHHHHHhhccCccchhhhhc-c---ccc-cccCCCHHHHHHHHHHHHcCc
Confidence 665 3789999999877432100000000000000000 0 010 112346899999999988654
|
|
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=94.71 E-value=0.26 Score=39.42 Aligned_cols=111 Identities=20% Similarity=0.121 Sum_probs=70.4
Q ss_pred chhHhHHHHHHHHHHHhcC--CC---EEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK--VR---RVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~--v~---~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|..|+.|++.++...- .. +++.+||..+-++-. .-+.|+.+|.+..-+...
T Consensus 140 m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~---------------------GysaYs~sK~alrgLa~~ 198 (331)
T KOG1210|consen 140 MDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIY---------------------GYSAYSPSKFALRGLAEA 198 (331)
T ss_pred HHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcc---------------------cccccccHHHHHHHHHHH
Confidence 6799999999998885432 22 889999965555322 246677777776655544
Q ss_pred HHH---HcCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCC--ccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 77 EAV---ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAK--TYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 77 ~~~---~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
..+ ..++.++..-|+.+--|+.... -+-+|. ..-.+.-+.+-.+++|++++.-+.+.
T Consensus 199 l~qE~i~~~v~Vt~~~P~~~~tpGfE~E-----------n~tkP~~t~ii~g~ss~~~~e~~a~~~~~~~~rg 260 (331)
T KOG1210|consen 199 LRQELIKYGVHVTLYYPPDTLTPGFERE-----------NKTKPEETKIIEGGSSVIKCEEMAKAIVKGMKRG 260 (331)
T ss_pred HHHHHhhcceEEEEEcCCCCCCCccccc-----------cccCchheeeecCCCCCcCHHHHHHHHHhHHhhc
Confidence 433 3478888888888876642210 011111 12233345588899999998877644
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=94.57 E-value=0.16 Score=37.60 Aligned_cols=69 Identities=23% Similarity=0.266 Sum_probs=54.2
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+..-+.|+.+|.++.....+..||.+||+++++|... ...|+..-...+.+.+... +.
T Consensus 109 ~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~~g---------------------q~~YaaAN~~lda~a~~~~-~~ 166 (181)
T PF08659_consen 109 LAPKVRGLWNLHEALENRPLDFFILFSSISSLLGGPG---------------------QSAYAAANAFLDALARQRR-SR 166 (181)
T ss_dssp HHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-TT---------------------BHHHHHHHHHHHHHHHHHH-HT
T ss_pred HhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccCcc---------------------hHhHHHHHHHHHHHHHHHH-hC
Confidence 3456889999999999988999999999988876542 5679988888888887654 56
Q ss_pred CccEEEEecCc
Q 026418 82 GVDLVVVNPVL 92 (239)
Q Consensus 82 ~~~~~i~Rp~~ 92 (239)
|.+++.+..+.
T Consensus 167 g~~~~sI~wg~ 177 (181)
T PF08659_consen 167 GLPAVSINWGA 177 (181)
T ss_dssp TSEEEEEEE-E
T ss_pred CCCEEEEEccc
Confidence 88988877654
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.52 E-value=0.17 Score=38.54 Aligned_cols=74 Identities=19% Similarity=0.081 Sum_probs=48.4
Q ss_pred chhHhHHHHHHHHHH----HhcCC-----------CEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKV-----------RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYG 66 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v-----------~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~s 66 (239)
+++|..|+.-+.+++ ++..- ..+|++||.++- ..+. . ..+...|.+|
T Consensus 113 ~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s---~~~~----~-----------~~~~~AYrmS 174 (249)
T KOG1611|consen 113 YETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGS---IGGF----R-----------PGGLSAYRMS 174 (249)
T ss_pred hhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccc---cCCC----C-----------CcchhhhHhh
Confidence 567777776666544 22222 278889885222 1111 0 1346789999
Q ss_pred HHHHHHHHHHHHHHc---CccEEEEecCcc
Q 026418 67 KAVAEKAAWEEAVAR---GVDLVVVNPVLV 93 (239)
Q Consensus 67 K~~~E~~~~~~~~~~---~~~~~i~Rp~~v 93 (239)
|.+.-...+..+-+. ++=++.+.||+|
T Consensus 175 KaAlN~f~ksls~dL~~~~ilv~sihPGwV 204 (249)
T KOG1611|consen 175 KAALNMFAKSLSVDLKDDHILVVSIHPGWV 204 (249)
T ss_pred HHHHHHHHHHhhhhhcCCcEEEEEecCCeE
Confidence 999998888876553 667778899888
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.44 E-value=0.22 Score=40.14 Aligned_cols=115 Identities=9% Similarity=0.024 Sum_probs=70.8
Q ss_pred chhHhHHHHHHHHHHHhc--CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~--~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++.++.+++... .-.++|++||.++..+.+ .....|+.+|...+.+.+.++.
T Consensus 149 ~~vNl~g~~~l~~a~~p~m~~~G~ii~iss~~~~~~~p--------------------~~~~~Y~asKaAl~~lt~~la~ 208 (299)
T PRK06300 149 LSTSSYSFVSLLSHFGPIMNPGGSTISLTYLASMRAVP--------------------GYGGGMSSAKAALESDTKVLAW 208 (299)
T ss_pred HHHHhHHHHHHHHHHHHHhhcCCeEEEEeehhhcCcCC--------------------CccHHHHHHHHHHHHHHHHHHH
Confidence 678999999999888653 124688888863322110 0013699999999999988876
Q ss_pred H----cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 80 A----RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 80 ~----~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
+ .|+++..+.||.+--+.... ....... ........ + ...+...+|+++++.+++..
T Consensus 209 el~~~~gIrVn~V~PG~v~T~~~~~-~~~~~~~-~~~~~~~~---p--~~r~~~peevA~~v~~L~s~ 269 (299)
T PRK06300 209 EAGRRWGIRVNTISAGPLASRAGKA-IGFIERM-VDYYQDWA---P--LPEPMEAEQVGAAAAFLVSP 269 (299)
T ss_pred HhCCCCCeEEEEEEeCCccChhhhc-ccccHHH-HHHHHhcC---C--CCCCcCHHHHHHHHHHHhCc
Confidence 5 37889999999885442110 0000011 11111111 1 12245789999999998764
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.21 E-value=0.73 Score=35.89 Aligned_cols=96 Identities=8% Similarity=-0.067 Sum_probs=56.9
Q ss_pred chhHhHHHHHHHHHHHhc-------CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA-------KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAA 74 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~-------~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~ 74 (239)
+++|+.++.++++++... +-..++..||. +... + .....|+.||...+.+.
T Consensus 104 ~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~-a~~~--------~-------------~~~~~Y~aSKaal~~~~ 161 (245)
T PRK12367 104 LEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSE-AEIQ--------P-------------ALSPSYEISKRLIGQLV 161 (245)
T ss_pred HHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecc-cccC--------C-------------CCCchhHHHHHHHHHHH
Confidence 678999999999987542 11234344442 2111 0 01346999999975433
Q ss_pred HHHHH-------HcCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC
Q 026418 75 WEEAV-------ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS 145 (239)
Q Consensus 75 ~~~~~-------~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 145 (239)
.+.+ ..++.+..+.|+.+..+. .+ ...+..+|+|+.++.++.+..
T Consensus 162 -~l~~~l~~e~~~~~i~v~~~~pg~~~t~~------------------~~-------~~~~~~~~vA~~i~~~~~~~~ 213 (245)
T PRK12367 162 -SLKKNLLDKNERKKLIIRKLILGPFRSEL------------------NP-------IGIMSADFVAKQILDQANLGL 213 (245)
T ss_pred -HHHHHHHHhhcccccEEEEecCCCccccc------------------Cc-------cCCCCHHHHHHHHHHHHhcCC
Confidence 2222 346777777776642110 00 114678999999999887543
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=94.12 E-value=0.64 Score=36.95 Aligned_cols=107 Identities=17% Similarity=0.171 Sum_probs=69.7
Q ss_pred chhHhHHHHHHHHH----HHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVA----AAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a----~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.+.....++ +.+.+-.++|-++|+++..|.. ....|+.||.++.-..+.+
T Consensus 142 ~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~---------------------gl~~YcaSK~a~vGfhesL 200 (300)
T KOG1201|consen 142 FDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPA---------------------GLADYCASKFAAVGFHESL 200 (300)
T ss_pred HHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCc---------------------cchhhhhhHHHHHHHHHHH
Confidence 67888887665554 4555567999999975554322 2467999999986655554
Q ss_pred HHH------cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCC
Q 026418 78 AVA------RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSA 146 (239)
Q Consensus 78 ~~~------~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~ 146 (239)
..+ .|++.+.+-|+.+= . .+.++ ...+ ......+..+.+|+.++.++...+.
T Consensus 201 ~~EL~~~~~~~IktTlv~P~~i~-T--------------gmf~~-~~~~-~~l~P~L~p~~va~~Iv~ai~~n~~ 258 (300)
T KOG1201|consen 201 SMELRALGKDGIKTTLVCPYFIN-T--------------GMFDG-ATPF-PTLAPLLEPEYVAKRIVEAILTNQA 258 (300)
T ss_pred HHHHHhcCCCCeeEEEEeeeecc-c--------------cccCC-CCCC-ccccCCCCHHHHHHHHHHHHHcCCc
Confidence 422 36888888887772 1 11122 1111 1235578899999999999876654
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.44 E-value=1.5 Score=34.84 Aligned_cols=119 Identities=18% Similarity=0.088 Sum_probs=70.2
Q ss_pred chhHhHH-HHHHHHHHHhc----CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIG-TKNVIVAAAEA----KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~-t~~ll~a~~~~----~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.| ...+.+++..+ +-..++++||. +-+.... .+...|+.+|...+.+.+.
T Consensus 118 ~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~-~~~~~~~-------------------~~~~~Y~~sK~al~~ltr~ 177 (270)
T KOG0725|consen 118 MATNLRGSAFCLKQAARPMLKKSKGGSIVNISSV-AGVGPGP-------------------GSGVAYGVSKAALLQLTRS 177 (270)
T ss_pred HhhhchhHHHHHHHHHHHHHHhcCCceEEEEecc-ccccCCC-------------------CCcccchhHHHHHHHHHHH
Confidence 5788884 66666665433 34578888885 3221111 1126799999999999988
Q ss_pred HHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcC--CCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNG--SAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 77 ~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
.+.+ .|+++-.+=|+.+..+....... ........+. .....+ .-.+.-.+|++.++.+++...
T Consensus 178 lA~El~~~gIRvN~v~PG~i~T~~~~~~~~--~~~~~~~~~~~~~~~~~p--~gr~g~~~eva~~~~fla~~~ 246 (270)
T KOG0725|consen 178 LAKELAKHGIRVNSVSPGLVKTSLRAAGLD--DGEMEEFKEATDSKGAVP--LGRVGTPEEVAEAAAFLASDD 246 (270)
T ss_pred HHHHHhhcCcEEEEeecCcEeCCccccccc--cchhhHHhhhhccccccc--cCCccCHHHHHHhHHhhcCcc
Confidence 8765 47898899999887764111100 0011111111 000111 123566889999998887653
|
|
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.32 E-value=0.06 Score=43.66 Aligned_cols=89 Identities=16% Similarity=0.079 Sum_probs=62.1
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+..|+..++++++++++++++++|+++|- -+-....-... .+.+.+. ..|...||.+-+..-|+-...++..
T Consensus 98 l~~N~~i~~~i~~~i~~~~~~~iviv~SN-Pvdv~~~~~~~-~~~~~sg------~p~~~viG~g~LDs~R~r~~la~~l 169 (321)
T PTZ00325 98 FNTNAPIVRDLVAAVASSAPKAIVGIVSN-PVNSTVPIAAE-TLKKAGV------YDPRKLFGVTTLDVVRARKFVAEAL 169 (321)
T ss_pred HHHHHHHHHHHHHHHHHHCCCeEEEEecC-cHHHHHHHHHh-hhhhccC------CChhheeechhHHHHHHHHHHHHHh
Confidence 56799999999999999999999999993 44322110000 0012221 2355667777677778888888888
Q ss_pred CccEEEEecCcccCCCCC
Q 026418 82 GVDLVVVNPVLVLGPLLQ 99 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~ 99 (239)
+++..-++ +.|+|.+-+
T Consensus 170 ~v~~~~V~-~~VlGeHGd 186 (321)
T PTZ00325 170 GMNPYDVN-VPVVGGHSG 186 (321)
T ss_pred CcChhheE-EEEEeecCC
Confidence 99888888 888997643
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=93.14 E-value=1.3 Score=37.40 Aligned_cols=96 Identities=11% Similarity=-0.028 Sum_probs=54.9
Q ss_pred chhHhHHHHHHHHHHHhc----CC---C-EEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----KV---R-RVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKA 73 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----~v---~-~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~ 73 (239)
+++|+.++.++++++.+. +. + .+|.+|+ +... + .....|+.||.+.+.+
T Consensus 270 ~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~~~---------~-------------~~~~~Y~ASKaAl~~l 326 (406)
T PRK07424 270 YEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AEVN---------P-------------AFSPLYELSKRALGDL 326 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-cccc---------C-------------CCchHHHHHHHHHHHH
Confidence 688999999999997532 21 2 2444443 2210 0 0124599999999887
Q ss_pred HHHHHHHcCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC
Q 026418 74 AWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS 145 (239)
Q Consensus 74 ~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 145 (239)
..-.....+..+.++.| ||..+.. + ....+..+|+|+.++.+++...
T Consensus 327 ~~l~~~~~~~~I~~i~~----gp~~t~~-------------~--------~~~~~spe~vA~~il~~i~~~~ 373 (406)
T PRK07424 327 VTLRRLDAPCVVRKLIL----GPFKSNL-------------N--------PIGVMSADWVAKQILKLAKRDF 373 (406)
T ss_pred HHHHHhCCCCceEEEEe----CCCcCCC-------------C--------cCCCCCHHHHHHHHHHHHHCCC
Confidence 53222223433444443 3322110 0 0124678999999999997553
|
|
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=93.08 E-value=0.97 Score=36.65 Aligned_cols=89 Identities=21% Similarity=0.083 Sum_probs=56.1
Q ss_pred chhHhHHHHHHHHH----HHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVA----AAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a----~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+.+|..|...|.+. +++....|+|++||. .. +..... +....|.... ......|+.||.+......++
T Consensus 140 ~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~-~~-~~~~~~-~~l~~~~~~~-----~~~~~~Y~~SKla~~l~~~eL 211 (314)
T KOG1208|consen 140 FATNYLGHFLLTELLLPLLKRSAPSRIVNVSSI-LG-GGKIDL-KDLSGEKAKL-----YSSDAAYALSKLANVLLANEL 211 (314)
T ss_pred ehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCc-cc-cCccch-hhccchhccC-----ccchhHHHHhHHHHHHHHHHH
Confidence 45777776665554 455444799999995 43 111110 0011111100 112235999999999999999
Q ss_pred HHHc--CccEEEEecCcccCCCC
Q 026418 78 AVAR--GVDLVVVNPVLVLGPLL 98 (239)
Q Consensus 78 ~~~~--~~~~~i~Rp~~v~G~~~ 98 (239)
+++. |+.+..+.||.+..+..
T Consensus 212 ~k~l~~~V~~~~~hPG~v~t~~l 234 (314)
T KOG1208|consen 212 AKRLKKGVTTYSVHPGVVKTTGL 234 (314)
T ss_pred HHHhhcCceEEEECCCcccccce
Confidence 8876 59999999999988743
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=92.93 E-value=0.56 Score=36.31 Aligned_cols=71 Identities=23% Similarity=0.203 Sum_probs=50.8
Q ss_pred chhHhHHHHHHHHHHHhcC-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccC-CchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNT-KNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~-~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.+...+.+++...- -+++|++||. ... .. .+ ...|+.||...+.+.+.++.
T Consensus 115 ~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~-~~~-~~--------------------~~~~~~Y~~sK~al~~~~~~l~~ 172 (251)
T COG1028 115 IDVNLLGAFLLTRAALPLMKKQRIVNISSV-AGL-GG--------------------PPGQAAYAASKAALIGLTKALAL 172 (251)
T ss_pred HHHhHHHHHHHHHHHHHhhhhCeEEEECCc-hhc-CC--------------------CCCcchHHHHHHHHHHHHHHHHH
Confidence 5789998888888554432 1289999996 322 11 11 36799999999988888774
Q ss_pred H---cCccEEEEecCccc
Q 026418 80 A---RGVDLVVVNPVLVL 94 (239)
Q Consensus 80 ~---~~~~~~i~Rp~~v~ 94 (239)
+ .|+.+..+-|+.+-
T Consensus 173 e~~~~gi~v~~v~PG~~~ 190 (251)
T COG1028 173 ELAPRGIRVNAVAPGYID 190 (251)
T ss_pred HHhhhCcEEEEEEeccCC
Confidence 4 57899999999443
|
|
| >KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=92.40 E-value=0.41 Score=36.54 Aligned_cols=71 Identities=21% Similarity=0.149 Sum_probs=53.3
Q ss_pred chhHhHHHHHHHHHHHhc----C-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----K-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
|+.|+.+...|...+... . .+.+|++||.+++- |+ .....|+.+|++-+.+.+.
T Consensus 113 ~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~---------p~------------~~wa~yc~~KaAr~m~f~~ 171 (253)
T KOG1204|consen 113 WDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVR---------PF------------SSWAAYCSSKAARNMYFMV 171 (253)
T ss_pred HHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhc---------cc------------cHHHHhhhhHHHHHHHHHH
Confidence 678888888888877543 1 37899999964432 11 1246699999999999998
Q ss_pred HHHHc--CccEEEEecCcc
Q 026418 77 EAVAR--GVDLVVVNPVLV 93 (239)
Q Consensus 77 ~~~~~--~~~~~i~Rp~~v 93 (239)
.+.+. ++.+..++||.+
T Consensus 172 lA~EEp~~v~vl~~aPGvv 190 (253)
T KOG1204|consen 172 LASEEPFDVRVLNYAPGVV 190 (253)
T ss_pred HhhcCccceeEEEccCCcc
Confidence 87654 788888999877
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=90.46 E-value=2.1 Score=32.82 Aligned_cols=70 Identities=9% Similarity=-0.148 Sum_probs=48.4
Q ss_pred hhHhHHHHHHHHH----HHhcC-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 3 EPAVIGTKNVIVA----AAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 3 ~~Nv~~t~~ll~a----~~~~~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
++|+.++..++++ ..+.+ -..+|++||. ..+ .+...|+.+|...+.+.+.+
T Consensus 113 ~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~-~~~-----------------------~~~~~Y~asKaal~~~~~~l 168 (227)
T PRK08862 113 SSLASTLFTYGQVAAERMRKRNKKGVIVNVISH-DDH-----------------------QDLTGVESSNALVSGFTHSW 168 (227)
T ss_pred HHhhHHHHHHHHHHHHHHHhcCCCceEEEEecC-CCC-----------------------CCcchhHHHHHHHHHHHHHH
Confidence 4566666555444 33333 3589999984 311 01356999999999988887
Q ss_pred HHH---cCccEEEEecCcccCC
Q 026418 78 AVA---RGVDLVVVNPVLVLGP 96 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~ 96 (239)
+.+ .++++..+.||.+-.+
T Consensus 169 a~el~~~~Irvn~v~PG~i~t~ 190 (227)
T PRK08862 169 AKELTPFNIRVGGVVPSIFSAN 190 (227)
T ss_pred HHHHhhcCcEEEEEecCcCcCC
Confidence 664 5899999999988655
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=88.75 E-value=0.18 Score=41.03 Aligned_cols=87 Identities=18% Similarity=0.058 Sum_probs=60.5
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
++.|+..++++++++.+++...+|+++|= -+=+...-... .+...+. ..|...||.+++..+++-..+++..
T Consensus 108 l~~N~~i~~~i~~~i~~~~p~aivivvSN-PvD~~~~i~t~-~~~~~s~------~p~~~viG~~~LDs~Rl~~~lA~~l 179 (323)
T PLN00106 108 FNINAGIVKTLCEAVAKHCPNALVNIISN-PVNSTVPIAAE-VLKKAGV------YDPKKLFGVTTLDVVRANTFVAEKK 179 (323)
T ss_pred HHHHHHHHHHHHHHHHHHCCCeEEEEeCC-CccccHHHHHH-HHHHcCC------CCcceEEEEecchHHHHHHHHHHHh
Confidence 56899999999999999999899998882 11000000000 0111111 2457789999999999999999999
Q ss_pred CccEEEEecCcccCCC
Q 026418 82 GVDLVVVNPVLVLGPL 97 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~ 97 (239)
+++..-++ +.|+|.+
T Consensus 180 gv~~~~V~-~~ViGeH 194 (323)
T PLN00106 180 GLDPADVD-VPVVGGH 194 (323)
T ss_pred CCChhheE-EEEEEeC
Confidence 99888875 6666754
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=83.94 E-value=4 Score=30.92 Aligned_cols=74 Identities=16% Similarity=0.231 Sum_probs=50.4
Q ss_pred chhHhHHHHHHHHHHHhc----CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH-
Q 026418 2 VEPAVIGTKNVIVAAAEA----KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE- 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~- 76 (239)
+.+|+.++..|..+...+ .-..+|.+|| +-.+-+ .+. ...|..+|.+..-+-..
T Consensus 108 I~~Nl~API~Lt~~~lphl~~q~~a~IInVSS-GLafvP---------m~~-----------~PvYcaTKAaiHsyt~aL 166 (245)
T COG3967 108 IATNLLAPIRLTALLLPHLLRQPEATIINVSS-GLAFVP---------MAS-----------TPVYCATKAAIHSYTLAL 166 (245)
T ss_pred HHHhhhhHHHHHHHHHHHHHhCCCceEEEecc-ccccCc---------ccc-----------cccchhhHHHHHHHHHHH
Confidence 457899988888777544 3457999999 343311 111 23499999998765544
Q ss_pred --HHHHcCccEEEEecCcccCC
Q 026418 77 --EAVARGVDLVVVNPVLVLGP 96 (239)
Q Consensus 77 --~~~~~~~~~~i~Rp~~v~G~ 96 (239)
..+..++.++-+-|+.|--+
T Consensus 167 R~Qlk~t~veVIE~~PP~V~t~ 188 (245)
T COG3967 167 REQLKDTSVEVIELAPPLVDTT 188 (245)
T ss_pred HHHhhhcceEEEEecCCceecC
Confidence 44456889999999988654
|
|
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=80.68 E-value=1 Score=36.72 Aligned_cols=85 Identities=12% Similarity=-0.002 Sum_probs=58.0
Q ss_pred chhHhHHHHHHHHHHHhcCC-CE-EEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKV-RR-VVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v-~~-~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
++.|+.-.+.+...+.+++. .- +|.+|. +.+-......... . ...+...||.+++..+++...+++
T Consensus 100 l~~N~~i~~~i~~~i~~~~~~~~iiivvsN------PvD~~t~~~~k~s-g-----~~p~~~ViG~t~LDs~Rl~~~la~ 167 (322)
T cd01338 100 LKANGKIFTAQGKALNDVASRDVKVLVVGN------PCNTNALIAMKNA-P-----DIPPDNFTAMTRLDHNRAKSQLAK 167 (322)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCeEEEEecC------cHHHHHHHHHHHc-C-----CCChHheEEehHHHHHHHHHHHHH
Confidence 46799999999999998873 33 444432 0000000001111 0 013456799999999999999999
Q ss_pred HcCccEEEEecCcccCCCC
Q 026418 80 ARGVDLVVVNPVLVLGPLL 98 (239)
Q Consensus 80 ~~~~~~~i~Rp~~v~G~~~ 98 (239)
..+++...+|...|||++.
T Consensus 168 ~lgv~~~~v~~~~V~GeHG 186 (322)
T cd01338 168 KAGVPVTDVKNMVIWGNHS 186 (322)
T ss_pred HhCcChhHeEEEEEEeCCc
Confidence 9999999999999999873
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=80.46 E-value=1.9 Score=31.60 Aligned_cols=115 Identities=19% Similarity=0.204 Sum_probs=67.1
Q ss_pred chhHhHHHHHHHHHHHh----cC-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.+..++.+...+ .+ ...+|.+||.++.- +++ ..+.|..+|.+-+.+.+.
T Consensus 105 F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R---------~~~------------nHtvYcatKaALDmlTk~ 163 (245)
T KOG1207|consen 105 FAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIR---------PLD------------NHTVYCATKAALDMLTKC 163 (245)
T ss_pred eeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhccc---------ccC------------CceEEeecHHHHHHHHHH
Confidence 46777777777766332 22 24588999963321 222 257799999999988877
Q ss_pred HHHHcC---ccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 77 EAVARG---VDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 77 ~~~~~~---~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
.+-+.| +++-.+.|..|+-.-...+++-+ ..-..+++..+ ..-|..|+.+++++.+++...
T Consensus 164 lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP-~K~k~mL~riP------l~rFaEV~eVVnA~lfLLSd~ 227 (245)
T KOG1207|consen 164 LALELGPQKIRVNSVNPTVVMTDMGRDNWSDP-DKKKKMLDRIP------LKRFAEVDEVVNAVLFLLSDN 227 (245)
T ss_pred HHHhhCcceeEeeccCCeEEEecccccccCCc-hhccchhhhCc------hhhhhHHHHHHhhheeeeecC
Confidence 766654 45555666655432111122111 11122222222 133788999999999988654
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 239 | ||||
| 2c29_D | 337 | Structure Of Dihydroflavonol Reductase From Vitis V | 7e-17 | ||
| 2rh8_A | 338 | Structure Of Apo Anthocyanidin Reductase From Vitis | 1e-11 | ||
| 2p4h_X | 322 | Crystal Structure Of Vestitone Reductase From Alfal | 2e-07 |
| >pdb|2C29|D Chain D, Structure Of Dihydroflavonol Reductase From Vitis Vinifera At 1.8 A. Length = 337 | Back alignment and structure |
|
| >pdb|2RH8|A Chain A, Structure Of Apo Anthocyanidin Reductase From Vitis Vinifera Length = 338 | Back alignment and structure |
|
| >pdb|2P4H|X Chain X, Crystal Structure Of Vestitone Reductase From Alfalfa (Medicago Sativa L.) Length = 322 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 239 | |||
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 1e-115 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 1e-115 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 1e-113 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 9e-85 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 6e-57 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 2e-45 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 1e-11 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 2e-11 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 7e-11 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 9e-11 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 1e-09 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 2e-09 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 5e-09 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 6e-08 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 2e-07 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 3e-07 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 8e-07 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 1e-06 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 1e-06 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 3e-06 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 3e-06 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 3e-06 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 4e-06 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 5e-06 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 6e-06 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 9e-06 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 1e-05 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 3e-05 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 4e-05 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 5e-05 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 7e-05 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 1e-04 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 1e-04 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 3e-04 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-04 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 4e-04 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 4e-04 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 5e-04 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 5e-04 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 9e-04 |
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337 | Back alignment and structure |
|---|
Score = 333 bits (856), Expect = e-115
Identities = 84/240 (35%), Positives = 133/240 (55%), Gaps = 9/240 (3%)
Query: 1 MVEPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFC--- 56
+++P + G ++ + A AK VRR+VFTSS G V + + V DESCWSD+EFC
Sbjct: 99 VIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEH--QLPVYDESCWSDMEFCRAK 156
Query: 57 KNTKNWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGS 116
K T Y K +AE+AAW+ A +D + + P LV+GP + S++ S+I L + G+
Sbjct: 157 KMTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGN 216
Query: 117 AKTYANSVQ-AYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPI 175
Y+ Q +VH+ D+ AHI ++E P A GRY+C+ ++ ++L + +PEY I
Sbjct: 217 EAHYSIIRQGQFVHLDDLCNAHIYLFENPKAEGRYICSSHDCIILDLAKMLREKYPEYNI 276
Query: 176 PTKCSDEKNPRKKPYKFSNQKLKDLGLEFT-PVKQCLYETVKSLQEKGHLPIPTQQQEES 234
PT+ + K FS++KL DLG EF ++ V + + KG LP ++ +
Sbjct: 277 PTEFKGV-DENLKSVCFSSKKLTDLGFEFKYSLEDMFTGAVDTCRAKGLLPPSHEKPVDG 335
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322 | Back alignment and structure |
|---|
Score = 331 bits (852), Expect = e-115
Identities = 65/229 (28%), Positives = 113/229 (49%), Gaps = 7/229 (3%)
Query: 1 MVEPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNT 59
+ + V G ++ A +K V+R ++TSS AV + DV+DES WSD++ ++
Sbjct: 96 VTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGK--DKDVLDESDWSDVDLLRSV 153
Query: 60 KNW---YCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGS 116
K + Y K +AEKA E G+D+V + ++G + + SI L + G
Sbjct: 154 KPFGWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGK 213
Query: 117 AKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIP 176
+ + VHV DVA AHI + E GRY C+ ++ E+ ++L+ +PEY I
Sbjct: 214 KEQIGVTRFHMVHVDDVARAHIYLLENSVPGGRYNCSPFIVPIEEMSQLLSAKYPEYQIL 273
Query: 177 TKCSDEKNPRKKPYKFSNQKLKDLGLEFT-PVKQCLYETVKSLQEKGHL 224
T ++ + + +KL D G +F ++ + ++ +EKG+L
Sbjct: 274 TVDELKEIKGARLPDLNTKKLVDAGFDFKYTIEDMFDDAIQCCKEKGYL 322
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338 | Back alignment and structure |
|---|
Score = 326 bits (838), Expect = e-113
Identities = 83/238 (34%), Positives = 120/238 (50%), Gaps = 15/238 (6%)
Query: 1 MVEPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFC--- 56
M++PA+ G NV+ A AK V+RV+ TSS AV ++ VVDE W+D+EF
Sbjct: 102 MIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSA 161
Query: 57 KNTKNWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGS 116
K Y K +AEKAAW+ A +DL+ V P L+ G L S V +SI + + G+
Sbjct: 162 KPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGN 221
Query: 117 --------AKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAK 168
+ + HV DV AHI V E SASGRY+C + E+ + L+K
Sbjct: 222 EFLINGMKGMQMLSGSVSIAHVEDVCRAHIFVAEKESASGRYICCAANTSVPELAKFLSK 281
Query: 169 FFPEYPIPTKCSDEKNPRKKPYKFSNQKLKDLGLEFT-PVKQCLYETVKSLQEKGHLP 225
+P+Y +PT D P K S++KL G F +++ E+V+ + KG L
Sbjct: 282 RYPQYKVPTDFGD--FPPKSKLIISSEKLVKEGFSFKYGIEEIYDESVEYFKAKGLLQ 337
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342 | Back alignment and structure |
|---|
Score = 254 bits (652), Expect = 9e-85
Identities = 52/239 (21%), Positives = 82/239 (34%), Gaps = 20/239 (8%)
Query: 1 MVEPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFC--- 56
+V PA+ GT N + AAA V+R V TSS + + +DE W+
Sbjct: 103 VVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAK 162
Query: 57 -------KNTKNWYCYGKAVAEKAAWEEAVARGV--DLVVVNPVLVLGPLLQSTVNA--S 105
+ + Y K AE AAW+ L V P +G + + +
Sbjct: 163 TLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGST 222
Query: 106 IIHILKYLNGSAKTYANSV--QAYVHVRDVALAHILVYETPSASG-RYLCAESVLHRGEV 162
++ NG + Q YV D+ L H+ P R V
Sbjct: 223 SGWMMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTV 282
Query: 163 VEILAKFFPEYPIPTKCSDEKNPRKK-PYKFSNQKLKDLGLE-FTPVKQCLYETVKSLQ 219
+ K +P P D+ K S + LK LG + +++ + + V S
Sbjct: 283 LATFRKLYPSKTFPADFPDQGQDLSKFDTAPSLEILKSLGRPGWRSIEESIKDLVGSET 341
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342 | Back alignment and structure |
|---|
Score = 183 bits (467), Expect = 6e-57
Identities = 42/252 (16%), Positives = 77/252 (30%), Gaps = 35/252 (13%)
Query: 1 MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK 60
V A+ T A +A+V R+++ S A+ P P E + D + K
Sbjct: 98 EVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLP---GHEGLFYD--SLPSGK 152
Query: 61 NWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY 120
+ Y K ++ A E G+ +V+ P +VLG L + I NG Y
Sbjct: 153 SSYVLCKWALDEQAR-EQARNGLPVVIGIPGMVLGELDIGPTTGRV--ITAIGNGEMTHY 209
Query: 121 ANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFF---PEYPIPT 177
+ + + ++ E RYL L ++ +A+ P+
Sbjct: 210 VAGQRNVIDAAEAGRGLLMALERGRIGERYLLTGHNLEMADLTRRIAELLGQPAPQPMSM 269
Query: 178 K----------------------CSDEKNPRKKPYKFSNQK-LKDLG-LEFTPVKQCLYE 213
+K ++LG T + L
Sbjct: 270 AMARALATLGRLRYRVSGQLPLLDETAIEVMAGGQFLDGRKAREELGFFSTTALDDTLLR 329
Query: 214 TVKSLQEKGHLP 225
+ ++ G+
Sbjct: 330 AIDWFRDNGYFN 341
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227 | Back alignment and structure |
|---|
Score = 150 bits (380), Expect = 2e-45
Identities = 26/163 (15%), Positives = 52/163 (31%), Gaps = 21/163 (12%)
Query: 1 MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK 60
+ + + +I +A V R + G++++ P D + +
Sbjct: 84 IYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGLRLMD-----------SGEVPE 132
Query: 61 NWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY 120
N KA+ E + +D V +P + P +++ +Y G
Sbjct: 133 NILPGVKALGEFYLNFLMKEKEIDWVFFSPAADMRPGVRTG---------RYRLGKDDMI 183
Query: 121 ANSV-QAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEV 162
+ V +++ V D A A I E P + H
Sbjct: 184 VDIVGNSHISVEDYAAAMIDELEHPKHHQERFTIGYLEHHHHH 226
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 1e-11
Identities = 38/235 (16%), Positives = 83/235 (35%), Gaps = 34/235 (14%)
Query: 6 VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCY 65
+ GT N++ AA + +V +VV S+I V+ +P + V + +
Sbjct: 89 MNGTYNILEAAKQHRVEKVVIPSTI-GVFGPE--TPKNKVPSITI------TRPRTMFGV 139
Query: 66 GKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQ-----STVNASIIH-ILKYLNGSAKT 119
K AE G+D+ + ++ + + I + +K K
Sbjct: 140 TKIAAELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVK--REKYKC 197
Query: 120 YANSVQA--YVHVRDVALAHILVYETPSASGRY-----LCAESVLHRGEVVEILAKFFPE 172
Y +A +++ D A + +YE + A + E+ + + PE
Sbjct: 198 YLAPNRALPMMYMPDALKALVDLYEADRDKLVLRNGYNVTAYTFTPS-ELYSKIKERIPE 256
Query: 173 YPIPTKCSDEKNPRK--KPYKFSNQK-LKDLGLEFTP---VKQCLYETVKSLQEK 221
+ I D ++ P + + + G F+ + + + + + + EK
Sbjct: 257 FEI-EYKEDFRDKIAATWPESLDSSEASNEWG--FSIEYDLDRTIDDMIDHISEK 308
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313 | Back alignment and structure |
|---|
Score = 61.8 bits (151), Expect = 2e-11
Identities = 43/233 (18%), Positives = 74/233 (31%), Gaps = 38/233 (16%)
Query: 6 VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCY 65
V+ T ++ A +A V R+VFTS+ VY + P E + + Y
Sbjct: 91 VLATYRLLEAMRKAGVSRIVFTST-STVYGEAKVIP---TPEDY------PTHPISLYGA 140
Query: 66 GKAVAEKAAWEEAVARGVDLVVV---NPVLVLGPLLQSTVNASIIHILKYLNGSAKT--Y 120
K E + + N V+G +ST I+K +
Sbjct: 141 SKLACEALIESYCHTFDMQAWIYRFAN---VIGR--RSTHGVIYDFIMKLKRNPEELEIL 195
Query: 121 ANSVQA--YVHVRDVALAHILVYETPSASGRYLCAE----SVLHRGEVVEILAKFFPEYP 174
N Q Y+++ D A + + V + EI+ +
Sbjct: 196 GNGEQNKSYIYISDCVDAMLFGLRGDERVNIFNIGSEDQIKVK---RIAEIVCEEL-GLS 251
Query: 175 IPTKCSDEKNPRK---KPYKFSNQKLKDLGLEFTP---VKQCLYETVKSLQEK 221
+ + K S +KLK LG + P ++ + V+ L E
Sbjct: 252 PRFRFTGGDRGWKGDVPVMLLSIEKLKRLG--WKPRYNSEEAVRMAVRDLVED 302
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221 | Back alignment and structure |
|---|
Score = 59.2 bits (143), Expect = 7e-11
Identities = 17/147 (11%), Positives = 48/147 (32%), Gaps = 17/147 (11%)
Query: 3 EPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNW 62
E V ++I R++ ++ +D + + +++ + +
Sbjct: 77 EKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNT--LLESKGLREAP-------Y 127
Query: 63 YCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYAN 122
Y +A A++ ++ ++P + P + T + I
Sbjct: 128 YPTARAQAKQLEHLKSHQAEFSWTYISPSAMFEPG-ERTGDYQIGKDHLLFGSDGN---- 182
Query: 123 SVQAYVHVRDVALAHILVYETPSASGR 149
+++ + D A+A + E P+
Sbjct: 183 ---SFISMEDYAIAVLDEIERPNHLNE 206
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404 | Back alignment and structure |
|---|
Score = 59.8 bits (145), Expect = 9e-11
Identities = 47/231 (20%), Positives = 75/231 (32%), Gaps = 36/231 (15%)
Query: 6 VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDV---VDESCWSDLE-FCKNTKN 61
VIGT NV+ A E + Y PN ++ + + +D + K +
Sbjct: 131 VIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASS 190
Query: 62 WYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYA 121
+Y K A G+ +N +V G T + + T
Sbjct: 191 FYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTAL 250
Query: 122 NS--VQA-----------------YVHVRDVALAHILVYETPSASGRY----LCAE--SV 156
N VQA Y+ +RD + P+ +G + E SV
Sbjct: 251 NRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSV 310
Query: 157 LHRGEVVEILAKFFPEYPIPTKCSDEKNPRK----KPYKFSNQKLKDLGLE 203
E+ ++ K + + K NPR Y + KL +LGLE
Sbjct: 311 N---ELASLVTKAGSKLGLDVKKMTVPNPRVEAEEHYYNAKHTKLMELGLE 358
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286 | Back alignment and structure |
|---|
Score = 56.3 bits (136), Expect = 1e-09
Identities = 39/204 (19%), Positives = 72/204 (35%), Gaps = 33/204 (16%)
Query: 6 VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCY 65
V G +N + A A ++ V F SS G VY ++ +DE +
Sbjct: 86 VEGLRNTLSALEGAPLQHVFFVSSTG-VYGQ---EVEEWLDEDTPPIAK--------DFS 133
Query: 66 GKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYA-NSV 124
GK + E EA+ ++ + GP + +++ + A N+
Sbjct: 134 GKRMLE----AEALLAAYSSTILRFSGIYGP--------GRLRMIRQAQTPEQWPARNAW 181
Query: 125 QAYVHVRDVA--LAHILVYETPSASGR-Y-LCAESVLHRGEVVEILAKFFPEYPIPTKCS 180
+H D A +A+++ + + R Y + L +++ LA P +
Sbjct: 182 TNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTDNQPLPVHDLLRWLADRQ-GIAYPAGAT 240
Query: 181 DEKNPRKKPYKFSNQKLKDLGLEF 204
K K SN +L G +
Sbjct: 241 PPVQGNK---KLSNARLLASGYQL 261
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312 | Back alignment and structure |
|---|
Score = 55.6 bits (135), Expect = 2e-09
Identities = 41/152 (26%), Positives = 56/152 (36%), Gaps = 26/152 (17%)
Query: 6 VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCY 65
V+ T NV+ A + VR VVF SS VY D + P E E + Y
Sbjct: 90 VVATFNVLEWARQTGVRTVVFASS-STVYGDADVIP---TPE------EEPYKPIS--VY 137
Query: 66 G--KAVAEKAAWEEAVARGVDLVVV---NPVLVLGPLLQSTVNASIIHILKYLNGSAKT- 119
G KA E A GV + V N V+GP L+ V I+K
Sbjct: 138 GAAKAAGEVMCATYARLFGVRCLAVRYAN---VVGPRLRHGVIY--DFIMKLRRNPNVLE 192
Query: 120 -YANSVQA--YVHVRDVALAHILVYETPSASG 148
+ Q Y++VRD A + ++
Sbjct: 193 VLGDGTQRKSYLYVRDAVEATLAAWKKFEEMD 224
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330 | Back alignment and structure |
|---|
Score = 54.5 bits (132), Expect = 5e-09
Identities = 30/172 (17%), Positives = 56/172 (32%), Gaps = 33/172 (19%)
Query: 6 VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCY 65
V G+ NV AA++A V+R++ + Y P P + + Y
Sbjct: 113 VQGSINVAKAASKAGVKRLLNFQT-ALCYGRPATVP---IPI------DSPTAPFTSYGI 162
Query: 66 GKAVAEKAAWEEAVARGVDLVVV-----NPVLVLGPLLQSTVNASIIHILKYLNGSAKTY 120
K E D+ VV N GP L + G
Sbjct: 163 SKTAGEA------FLMMSDVPVVSLRLANVT---GPRLAIGPIP--TFYKRLKAGQKCFC 211
Query: 121 ANSVQAYVHVRDVALAHILVYETPSASGRYLCAE----SVLHRGEVVEILAK 168
+++V+ ++ + D L + +G + + S+ EV +++
Sbjct: 212 SDTVRDFLDMSDFLAIADLSLQEGRPTGVFNVSTGEGHSIK---EVFDVVLD 260
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253 | Back alignment and structure |
|---|
Score = 51.0 bits (122), Expect = 6e-08
Identities = 24/143 (16%), Positives = 38/143 (26%), Gaps = 31/143 (21%)
Query: 8 GTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGK 67
G KN I AA A V+ +V S+G P + +
Sbjct: 112 GQKNQIDAAKVAGVKHIVVVGSMGG---TNPDHPLNKLGNG------------------N 150
Query: 68 AVAEKAAWEEAV-ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQA 126
+ K E+ + G ++ +L + L G +
Sbjct: 151 ILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGV---------RELLVGKDDELLQTDTK 201
Query: 127 YVHVRDVALAHILVYETPSASGR 149
V DVA I A +
Sbjct: 202 TVPRADVAEVCIQALLFEEAKNK 224
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 2e-07
Identities = 12/38 (31%), Positives = 17/38 (44%)
Query: 6 VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDD 43
+IG N+ AA R+VF SS + P + D
Sbjct: 87 IIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRID 124
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478 | Back alignment and structure |
|---|
Score = 49.5 bits (118), Expect = 3e-07
Identities = 16/97 (16%), Positives = 30/97 (30%), Gaps = 1/97 (1%)
Query: 1 MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAV-YMDPNRSPDDVVDESCWSDLEFCKNT 59
+ P V GT +I A K++ + S+ ++P+ +D
Sbjct: 186 LFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGW 245
Query: 60 KNWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGP 96
Y K E E + + V ++L
Sbjct: 246 AGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILAD 282
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 8e-07
Identities = 25/167 (14%), Positives = 52/167 (31%), Gaps = 37/167 (22%)
Query: 8 GTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGK 67
G ++ AA +A+V+R + S+I ++ + + Y K
Sbjct: 85 GAVKLMQAAEKAEVKRFILLSTIFSLQPEKWIGAGF--------------DALKDYYIAK 130
Query: 68 AVAEKAAWEEAVARGVDLVVVNP-VLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQA 126
A+ +E +D ++ P L +I I ++ S
Sbjct: 131 HFADLYLTKE---TNLDYTIIQPGALTEEE------ATGLIDINDEVSAS---------- 171
Query: 127 YVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEY 173
+ DVA + T + G+ + + + E L +
Sbjct: 172 -NTIGDVADTIKELVMTDHSIGKVI--SMHNGKTAIKEALESLLEHH 215
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311 | Back alignment and structure |
|---|
Score = 47.1 bits (113), Expect = 1e-06
Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 6 VIGTKNVIVAAAEAKVRRVVFTSSIGAVY-MDPNRSPDDVVDES 48
++G N++ A + V ++VF S+ GA+Y P +E+
Sbjct: 94 LLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGER---AEET 134
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 1e-06
Identities = 11/38 (28%), Positives = 15/38 (39%)
Query: 6 VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDD 43
+IG N+ AA R+VF SS + P
Sbjct: 88 IIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLG 125
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224 | Back alignment and structure |
|---|
Score = 46.2 bits (109), Expect = 3e-06
Identities = 17/145 (11%), Positives = 42/145 (28%), Gaps = 18/145 (12%)
Query: 5 AVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYC 64
+ +++ + V S + M P + + + Y
Sbjct: 82 HLDFATHLVSLLRNSDTLAVFILGSAS-LAMPGADHPMILDFPESAASQPWYDGALYQY- 139
Query: 65 YGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSV 124
+ V+ + ++P ++ A +L +G
Sbjct: 140 -------YEYQFLQMNANVNWIGISPSEAFPSGPATSYVAGKDTLLVGEDG--------- 183
Query: 125 QAYVHVRDVALAHILVYETPSASGR 149
Q+++ ++ALA + E P+A
Sbjct: 184 QSHITTGNMALAILDQLEHPTAIRD 208
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 3e-06
Identities = 19/144 (13%), Positives = 36/144 (25%), Gaps = 38/144 (26%)
Query: 8 GTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGK 67
G +N++ A V +VV +S ++ DP + P
Sbjct: 90 GARNIVAAMKAHGVDKVVACTSAFLLW-DPTKVPPR---------------------LQA 127
Query: 68 AVAEKAAWEEAV-ARGVDLVVVNP-VLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQ 125
+ + + G+ V V P + PL +
Sbjct: 128 VTDDHIRMHKVLRESGLKYVAVMPPHIGDQPLTG--------------AYTVTLDGRGPS 173
Query: 126 AYVHVRDVALAHILVYETPSASGR 149
+ D+ + T G
Sbjct: 174 RVISKHDLGHFMLRCLTTDEYDGH 197
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 3e-06
Identities = 44/226 (19%), Positives = 73/226 (32%), Gaps = 46/226 (20%)
Query: 6 VIGTKNVIVAAAEAKVR-----RVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK 60
+ GT+ + A A + RVVFTSSI AV+ P P + +
Sbjct: 113 LDGTRYLFDAIRIANGKDGYKPRVVFTSSI-AVFGAPLPYP---IPDEFH------TTPL 162
Query: 61 NWYCYGKAVAEKAAWEEAVARGVDLVVV-NPVLVLGPLLQSTVNAS--IIHILK------ 111
Y KA+ E + + D + + P + + AS +IL+
Sbjct: 163 TSYGTQKAICELLLSDYSRRGFFDGIGIRLPT-ICIRPGKPNAAASGFFSNILREPLVGQ 221
Query: 112 ----YLNGSAKTYANS----VQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVV 163
+ S + + S V +H + + + S G +V GE +
Sbjct: 222 EAVLPVPESIRHWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMPGLSA---TV---GEQI 275
Query: 164 EILAKFFPEYPIPTKCSDEKNPRKK------PYKFSNQKLKDLGLE 203
E L K E E N F ++ ++LG
Sbjct: 276 EALRKVAGE-KAVALIRREPNEMIMRMCEGWAPGFEAKRARELGFT 320
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 4e-06
Identities = 27/144 (18%), Positives = 46/144 (31%), Gaps = 39/144 (27%)
Query: 8 GTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGK 67
G I A + ++R + SS+G V DP++ P N Y
Sbjct: 110 GAIKTIQEAEKRGIKRFIMVSSVGTV--DPDQGPM------------------NMRHYLV 149
Query: 68 AVAEKAAWEEAVAR-GVDLVVVNP-VLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQ 125
A K ++ + R +D +V P L ST ++ + S
Sbjct: 150 A---KRLADDELKRSSLDYTIVRPGPLSNEE---STGKVTVSPHFSEITRS--------- 194
Query: 126 AYVHVRDVALAHILVYETPSASGR 149
+ DVA + + G+
Sbjct: 195 --ITRHDVAKVIAELVDQQHTIGK 216
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 5e-06
Identities = 45/249 (18%), Positives = 78/249 (31%), Gaps = 64/249 (25%)
Query: 6 VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCY 65
+K ++ E ++ + +S+ A Y ++ + N Y Y
Sbjct: 94 YQYSKELLHYCLEREIPFLYASSA--ATYGGRTSDF---IESRE------YEKPLNVYGY 142
Query: 66 GKAVAEKAAWEEAVARGVDLVVV---NPVLVLGPLLQSTVN-------ASIIHIL--KYL 113
K + ++ + +V N V GP AS+ L +
Sbjct: 143 SKFLFDEYVRQILPEANSQIVGFRYFN---VYGP------REGHKGSMASVAFHLNTQLN 193
Query: 114 NG-SAKTYANS-VQA--YVHVRDVALAHILVYETPS------ASGRYLCAESVLHRGEVV 163
NG S K + S +V+V DVA ++ E +GR AES V
Sbjct: 194 NGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGVSGIFNLGTGR---AESFQ---AVA 247
Query: 164 EILAKFF----PEY-PIPTKCSDEKNPRKKPYKFS---NQKLKDLG--LEFTPVKQCLYE 213
+ + EY P P + + F+ L+ G F V + + E
Sbjct: 248 DATLAYHKKGQIEYIPFP------DKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTE 301
Query: 214 TVKSLQEKG 222
+ L
Sbjct: 302 YMAWLNRDA 310
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 6e-06
Identities = 28/150 (18%), Positives = 56/150 (37%), Gaps = 18/150 (12%)
Query: 6 VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCY 65
I T+N+ A E + +V+ S+ + Y D P +E + Y
Sbjct: 86 EILTQNLYDACYENNISNIVYAST-ISAYSDETSLP---WNE------KELPLPDLMYGV 135
Query: 66 GKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHIL--KYLNGSAKT-YAN 122
K E + +G+ + + + G + +I+ + +G T +AN
Sbjct: 136 SKLACEHIGNIYSRKKGLCIKNLRFAHLYGF-NEKN--NYMINRFFRQAFHGEQLTLHAN 192
Query: 123 SVQA--YVHVRDVALAHILVYETPSASGRY 150
SV +++ +D A + I + SG +
Sbjct: 193 SVAKREFLYAKDAAKSVIYALKQEKVSGTF 222
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 9e-06
Identities = 45/249 (18%), Positives = 78/249 (31%), Gaps = 64/249 (25%)
Query: 6 VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCY 65
+K ++ E ++ ++ SS A Y ++ + N + Y
Sbjct: 141 YQYSKELLHYCLEREI-PFLYASS-AATYGGRTSDF---IES------REYEKPLNVFGY 189
Query: 66 GKAVAEKAAWEEAVARGVDLVVV---NPVLVLGPLLQSTVN-------ASIIHIL--KYL 113
K + ++ + +V N V GP AS+ L +
Sbjct: 190 SKFLFDEYVRQILPEANSQIVGFRYFN---VYGP------REGHKGSMASVAFHLNTQLN 240
Query: 114 NG-SAKTYANS-VQA--YVHVRDVALAHILVYETPS------ASGRYLCAESVLHRGEVV 163
NG S K + S +V+V DVA ++ E +GR AES V
Sbjct: 241 NGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGVSGIFNLGTGR---AESFQ---AVA 294
Query: 164 EILAKFF----PEY-PIPTKCSDEKNPRKKPYKFS---NQKLKDLG--LEFTPVKQCLYE 213
+ + EY P P + + F+ L+ G F V + + E
Sbjct: 295 DATLAYHKKGQIEYIPFP------DKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTE 348
Query: 214 TVKSLQEKG 222
+ L
Sbjct: 349 YMAWLNRDA 357
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286 | Back alignment and structure |
|---|
Score = 44.1 bits (104), Expect = 1e-05
Identities = 37/203 (18%), Positives = 64/203 (31%), Gaps = 32/203 (15%)
Query: 13 IVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEK 72
+AA A+ R V + S+ VY D + VDE+ + V +
Sbjct: 87 QIAARAAQFRWVGYLSTTA-VYGDHD---GAWVDETTPLTPTAARGR-------WRVMAE 135
Query: 73 AAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAY--VHV 130
W+ + L V + GP K G + Q + +HV
Sbjct: 136 QQWQA--VPNLPLHVFRLAGIYGP------GRGP--FSKLGKGGIRRIIKPGQVFSRIHV 185
Query: 131 RDVALAHILVYETPSASGRY-LCAESVLHRGEVVEILAKFFPEYPIPTKCSDEKNPRKKP 189
D+A P Y +C + + +V+ A+ P D+ +
Sbjct: 186 EDIAQVLAASMARPDPGAVYNVCDDEPVPPQDVIAYAAELQGLPLPPAVDFDKADLTPMA 245
Query: 190 YKF-------SNQKLK-DLGLEF 204
F N ++K +LG+
Sbjct: 246 RSFYSENKRVRNDRIKEELGVRL 268
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 3e-05
Identities = 11/36 (30%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 6 VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSP 41
+ G N+++AA +AKV+ + +S + Y D P
Sbjct: 130 IDGFLNMLIAARDAKVQSFTYAAS-SSTYGDHPGLP 164
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321 | Back alignment and structure |
|---|
Score = 42.5 bits (101), Expect = 4e-05
Identities = 8/36 (22%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 6 VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSP 41
V ++++ V +VV S+ VY + P
Sbjct: 96 VDSGRHLLALCTSVGVPKVVVGST-CEVYGQADTLP 130
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236 | Back alignment and structure |
|---|
Score = 42.1 bits (99), Expect = 5e-05
Identities = 29/164 (17%), Positives = 52/164 (31%), Gaps = 42/164 (25%)
Query: 3 EPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNW 62
E I +VI A V+R++F S+G P + + W++
Sbjct: 99 EDLDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVE-------WNNAVI------- 144
Query: 63 YCYGKAVAEKAAWEEAV-ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYA 121
G+ + +A+ A G++ ++ P + I + L N K
Sbjct: 145 ---GEPLKPFRRAADAIEASGLEYTILRPAWLTD-------EDIIDYELTSRNEPFKG-- 192
Query: 122 NSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEI 165
V + VA + + P H GE + I
Sbjct: 193 ----TIVSRKSVAALITDIIDKPEK-----------HIGENIGI 221
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 7e-05
Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Query: 6 VIGTKNVIVAAAEAKVRRVVFTSSIGAVY-MDPNRSPDDV 44
+G NV+ AA + V R V+ + Y + P + P +
Sbjct: 114 CVGGSNVVQAAKKNNVGRFVYFQT-ALCYGVKPIQQPVRL 152
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* Length = 344 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 1e-04
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 6 VIGTKNVIVAAAEAKVRRVVFTSSIGAVY 34
++G NVI A + + +V+ S+ A
Sbjct: 119 IMGASNVINACLKNAISQVIALSTDKAAN 147
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 1e-04
Identities = 8/44 (18%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Query: 6 VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNR--SPDDVVDE 47
+ +V+ A K++++ + SSI + +P + E
Sbjct: 95 MNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIME 138
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379 | Back alignment and structure |
|---|
Score = 40.4 bits (95), Expect = 3e-04
Identities = 15/91 (16%), Positives = 33/91 (36%), Gaps = 3/91 (3%)
Query: 6 VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCY 65
+ + N+I AA ++R + SS +Y + + SD + ++ +
Sbjct: 122 TMISFNMIEAARINGIKRFFYASSA-CIYPEFKQLETT-NVSLKESDA-WPAEPQDAFGL 178
Query: 66 GKAVAEKAAWEEAVARGVDLVVVNPVLVLGP 96
K E+ G++ + + GP
Sbjct: 179 EKLATEELCKHYNKDFGIECRIGRFHNIYGP 209
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 40.2 bits (93), Expect = 4e-04
Identities = 43/261 (16%), Positives = 73/261 (27%), Gaps = 74/261 (28%)
Query: 10 KNVIVAAA--EAKVRRV----VFTSSIGAVYMDPNRSPDDVVD--ESCWSDLEFCKNTKN 61
K + KV+ +F ++ SP+ V++ + ++ N
Sbjct: 163 KTWVALDVCLSYKVQCKMDFKIFWLNLKNC-----NSPETVLEMLQKLLYQID-----PN 212
Query: 62 WYCYGK-AVAEKAAWEEAVARGVDLVV----VNPVLVLGPLLQSTV-NASIIHILKYLNG 115
W + K A L+ N +LVL V NA N
Sbjct: 213 WTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVL-----LNVQNAKAW---NAFNL 264
Query: 116 SAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESV---LHRGEVVEILAKFF-- 170
S K + R + L +A+ ++ + L EV +L K+
Sbjct: 265 SCKIL-------LTTRFKQVTDFLS----AATTTHISLDHHSMTLTPDEVKSLLLKYLDC 313
Query: 171 -----PE-----YP-----IPTKCSDEKNPRKKPYKFSNQ-KLKDL------GLEFTPVK 208
P P I D +K N KL + LE +
Sbjct: 314 RPQDLPREVLTTNPRRLSIIAESIRDGLA-TWDNWKHVNCDKLTTIIESSLNVLEPAEYR 372
Query: 209 QCLYETVKSLQEKGHLPIPTQ 229
+ ++ + IPT
Sbjct: 373 KM-FDRLSVFPP--SAHIPTI 390
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377 | Back alignment and structure |
|---|
Score = 40.0 bits (94), Expect = 4e-04
Identities = 26/165 (15%), Positives = 44/165 (26%), Gaps = 28/165 (16%)
Query: 6 VIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYC 64
+ T + K +++VV++++ ++ DD + N
Sbjct: 127 TLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTF---DDAKATEETDIVSLHNND---SP 180
Query: 65 YG--KAVAEK--AAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIH------------ 108
Y K E + + + V V GP
Sbjct: 181 YSMSKIFGEFYSVYYHK--QHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTF 238
Query: 109 ILKYLNGSAKT-YANSVQ--AYVHVRDVALAHILVYETPSASGRY 150
I K L G V ++ V DVA I + G Y
Sbjct: 239 IYKALKGMPLPLENGGVATRDFIFVEDVANGLIACAADGTPGGVY 283
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351 | Back alignment and structure |
|---|
Score = 39.9 bits (94), Expect = 4e-04
Identities = 10/44 (22%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Query: 6 VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSP--DDVVDE 47
+ G N++ AA A+V+ + +S + Y D P ++ +
Sbjct: 128 ITGFLNILHAAKNAQVQSFTYAAS-SSTYGDHPALPKVEENIGN 170
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362 | Back alignment and structure |
|---|
Score = 39.6 bits (93), Expect = 5e-04
Identities = 37/243 (15%), Positives = 75/243 (30%), Gaps = 63/243 (25%)
Query: 6 VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCY 65
N++ A K +V++ SS VY + ++ +N Y +
Sbjct: 116 YQAFLNLLEIARSKKA-KVIYASS-AGVYGNTKAPNVV----------GKNESPENVYGF 163
Query: 66 GKAVAEKAAWEEAVARGVDLVVV-----NPVLVLGPLLQSTVN-------ASIIHIL--K 111
K ++ ++ D V V N V GP AS++ L
Sbjct: 164 SKLCMDEF----VLSHSNDNVQVGLRYFN---VYGP------REFYKEKTASMVLQLALG 210
Query: 112 YLNG-SAKTYANSVQA--YVHVRDVALAHILVYETPS------ASGRYLCAESVLHRGEV 162
+ K + Q +V++ DV A++ + + A S E+
Sbjct: 211 AMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMKAQKSGVYNVGYSQ---ARSYN---EI 264
Query: 163 VEILAKFFPEYPIPTKCSDEKNPRKKPYKFS---NQKLKDLG--LEFTPVKQCLYETVKS 217
V IL + ++ + KNP K + + ++ + + +
Sbjct: 265 VSILKEHLGDFKVTYI----KNPYAFFQKHTQAHIEPTILDLDYTPLYDLESGIKDYLPH 320
Query: 218 LQE 220
+
Sbjct: 321 IHA 323
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289 | Back alignment and structure |
|---|
Score = 39.6 bits (93), Expect = 5e-04
Identities = 6/34 (17%), Positives = 15/34 (44%)
Query: 10 KNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDD 43
+N++ AA ++ V ++F + +P
Sbjct: 87 ENLVYAAKQSGVAHIIFIGYYADQHNNPFHMSPY 120
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286 | Back alignment and structure |
|---|
Score = 38.8 bits (91), Expect = 9e-04
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 10 KNVIVAAAEAKVRRVVFTSSIGA 32
+NVI AA A V+ + +TS + A
Sbjct: 85 RNVINAAKAAGVKFIAYTSLLHA 107
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 239 | |||
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 100.0 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 100.0 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 100.0 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 100.0 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 100.0 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 100.0 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 100.0 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 100.0 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 100.0 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 100.0 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 100.0 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.98 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.98 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 99.97 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.97 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.97 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.97 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.97 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.97 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.97 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.97 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.97 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.97 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.97 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.97 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 99.97 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.97 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 99.97 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.97 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.97 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.97 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.97 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.97 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.97 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.97 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.97 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.97 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.97 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.97 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.97 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.96 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.96 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.96 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.96 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.96 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.96 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.96 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.96 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.96 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.96 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.96 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.96 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.95 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.95 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.95 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.95 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.93 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.92 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.9 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.88 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.88 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.86 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.84 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.84 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.83 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.83 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.81 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.81 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.81 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.75 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.71 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.71 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.7 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.7 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.69 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.67 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.66 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.63 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.63 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.53 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.47 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.46 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.37 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.35 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.33 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.33 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.25 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.21 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.21 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.2 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.19 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.16 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.15 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.14 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.11 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.08 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.07 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.07 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.04 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.03 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.02 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.02 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 98.99 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 98.99 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 98.99 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 98.98 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 98.97 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 98.96 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 98.94 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 98.94 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 98.93 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 98.92 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.9 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 98.89 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 98.88 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 98.88 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 98.87 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 98.87 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 98.87 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 98.85 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 98.84 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 98.83 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 98.83 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 98.83 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 98.83 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 98.82 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 98.82 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 98.81 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 98.81 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 98.8 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 98.79 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 98.79 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 98.78 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 98.77 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 98.77 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 98.76 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 98.76 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 98.76 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 98.76 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 98.76 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 98.76 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 98.76 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 98.76 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 98.76 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 98.75 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 98.75 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 98.75 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 98.75 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 98.74 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 98.74 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 98.73 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 98.73 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 98.73 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 98.72 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 98.71 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 98.71 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 98.71 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 98.7 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 98.7 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 98.7 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 98.69 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 98.69 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 98.69 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 98.68 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 98.68 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 98.68 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 98.68 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 98.67 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 98.67 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 98.67 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 98.67 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 98.66 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 98.66 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 98.66 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 98.66 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 98.66 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 98.65 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 98.65 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 98.65 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 98.64 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 98.64 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 98.64 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 98.63 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 98.63 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 98.63 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 98.63 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 98.62 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 98.62 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 98.61 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 98.61 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 98.61 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 98.61 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 98.61 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 98.6 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 98.59 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 98.58 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 98.58 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 98.58 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 98.58 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 98.57 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 98.57 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 98.57 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 98.57 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 98.57 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 98.57 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 98.57 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 98.57 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 98.56 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 98.56 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 98.56 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 98.56 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 98.56 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.56 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 98.56 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 98.55 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 98.54 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 98.54 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 98.53 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 98.53 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 98.53 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 98.53 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 98.52 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 98.52 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 98.52 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 98.52 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 98.51 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 98.51 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 98.49 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 98.49 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 98.49 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 98.47 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 98.47 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 98.47 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 98.47 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 98.46 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 98.45 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 98.45 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 98.45 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 98.45 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 98.44 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 98.44 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 98.43 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 98.43 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 98.43 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 98.43 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 98.43 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 98.42 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 98.42 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 98.4 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 98.4 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 98.4 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 98.4 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 98.4 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 98.39 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 98.38 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 98.38 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 98.38 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 98.37 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 98.37 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 98.37 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 98.37 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.36 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 98.36 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 98.35 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 98.35 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 98.35 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 98.34 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.34 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 98.34 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 98.34 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 98.3 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 98.27 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 98.26 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 98.25 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 98.23 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 98.2 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 98.2 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 98.17 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 98.16 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 98.12 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 98.11 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 98.1 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 98.08 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 98.05 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 97.93 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 97.9 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 97.78 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 97.73 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 97.72 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 97.62 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 97.58 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 97.58 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 97.55 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 97.55 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 97.46 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 97.31 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 97.29 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 97.23 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 97.2 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 97.15 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 97.15 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 97.03 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 97.02 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 96.79 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 95.47 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 95.38 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 95.32 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 95.06 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 94.41 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 94.08 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 91.01 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 90.31 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 88.59 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 87.78 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 82.81 |
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-34 Score=228.50 Aligned_cols=214 Identities=15% Similarity=0.120 Sum_probs=172.8
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+++|+.++.+++++|++.++++|||+|| .++|+..... +++|+++ ..|.+.|+.+|..+|++++.++++.
T Consensus 82 ~~~n~~~~~~ll~a~~~~~~~r~v~~SS-~~vyg~~~~~---~~~E~~~------~~p~~~Y~~sK~~~E~~~~~~~~~~ 151 (311)
T 3m2p_A 82 FHDNEILTQNLYDACYENNISNIVYAST-ISAYSDETSL---PWNEKEL------PLPDLMYGVSKLACEHIGNIYSRKK 151 (311)
T ss_dssp THHHHHHHHHHHHHHHHTTCCEEEEEEE-GGGCCCGGGC---SBCTTSC------CCCSSHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEEcc-HHHhCCCCCC---CCCCCCC------CCCCchhHHHHHHHHHHHHHHHHHc
Confidence 5789999999999999999999999999 5999877655 7888876 3568999999999999999999888
Q ss_pred CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCcc---CCCCCCceehHHHHHHHHHhhcCCCCCceEEEe-cCCC
Q 026418 82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY---ANSVQAYVHVRDVALAHILVYETPSASGRYLCA-ESVL 157 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~ 157 (239)
+++++++||+.+|||..... .....++..+..+..+.. ++..++|+|++|+|++++.++.++..+++||++ ++++
T Consensus 152 g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~i~~~~~~ 230 (311)
T 3m2p_A 152 GLCIKNLRFAHLYGFNEKNN-YMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEKVSGTFNIGSGDAL 230 (311)
T ss_dssp CCEEEEEEECEEECSCC--C-CHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTTCCEEEEECCSCEE
T ss_pred CCCEEEEeeCceeCcCCCCC-CHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCCCCCeEEeCCCCcc
Confidence 99999999999999986543 344566777788877653 456678999999999999999877655699887 7889
Q ss_pred CHHHHHHHHHHhCCCCCCCCCCCCC-CCCCCCCcccChHHHHh-hCCce-eCHHHHHHHHHHHHHHcCCCCCC
Q 026418 158 HRGEVVEILAKFFPEYPIPTKCSDE-KNPRKKPYKFSNQKLKD-LGLEF-TPVKQCLYETVKSLQEKGHLPIP 227 (239)
Q Consensus 158 s~~el~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~k~~~-lg~~p-~~~~e~i~~~~~~~~~~g~~~~~ 227 (239)
|+.|+++.+.+.+ +.+.+....+. .........+|++|+++ |||+| ++++++|+++++|+++.+.-+.-
T Consensus 231 s~~e~~~~i~~~~-g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~~~~~~ 302 (311)
T 3m2p_A 231 TNYEVANTINNAF-GNKDNLLVKNPNANEGIHSSYMDSSKAKELLDFSTDYNFATAVEEIHLLMRGLDDVPLW 302 (311)
T ss_dssp CHHHHHHHHHHHT-TCTTCEEECSSSBCCSCCCBCBCCHHHHHHSCCCCSCCHHHHHHHHHHHHCC-------
T ss_pred cHHHHHHHHHHHh-CCCCcceecCCCCCCCcCceecCHHHHHHHhCCCcccCHHHHHHHHHHHHHhcccCcce
Confidence 9999999999997 44433333332 34456788999999987 99999 69999999999999887765543
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-34 Score=228.27 Aligned_cols=214 Identities=16% Similarity=0.121 Sum_probs=166.8
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+++|+.++.+++++|++.++++|||+|| .++|+..... +++|+.+ ..|.+.|+.+|..+|.+++.++++.
T Consensus 87 ~~~nv~~~~~l~~~~~~~~~~~iv~~SS-~~vyg~~~~~---~~~E~~~------~~~~~~Y~~sK~~~e~~~~~~~~~~ 156 (313)
T 3ehe_A 87 YRNNVLATYRLLEAMRKAGVSRIVFTST-STVYGEAKVI---PTPEDYP------THPISLYGASKLACEALIESYCHTF 156 (313)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEEECC-GGGGCSCSSS---SBCTTSC------CCCCSHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHcCCCeEEEeCc-hHHhCcCCCC---CCCCCCC------CCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 5789999999999999999999999999 5999876654 7888876 3567899999999999999999889
Q ss_pred CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCC-C-ccC--CCCCCceehHHHHHHHHHhhcCCCCCceEEEe-cCC
Q 026418 82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSA-K-TYA--NSVQAYVHVRDVALAHILVYETPSASGRYLCA-ESV 156 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~-~-~~~--~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~ 156 (239)
+++++++||+++|||+... .....++..+..+.. . .++ +..++|+|++|+|++++.++.....+++||++ +++
T Consensus 157 g~~~~ilRp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~ni~~~~~ 234 (313)
T 3ehe_A 157 DMQAWIYRFANVIGRRSTH--GVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGDERVNIFNIGSEDQ 234 (313)
T ss_dssp TCEEEEEECSCEESTTCCC--SHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTCCSSEEEEECCCSCC
T ss_pred CCCEEEEeeccccCcCCCc--ChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhccCCCCceEEECCCCC
Confidence 9999999999999997653 344456667776643 2 244 45689999999999999999844444599887 789
Q ss_pred CCHHHHHHHHHHhCCCCCCCCCCCCC---CCCCCCCcccChHHHHhhCCce-eCHHHHHHHHHHHHHHcCCCCCCc
Q 026418 157 LHRGEVVEILAKFFPEYPIPTKCSDE---KNPRKKPYKFSNQKLKDLGLEF-TPVKQCLYETVKSLQEKGHLPIPT 228 (239)
Q Consensus 157 ~s~~el~~~i~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~k~~~lg~~p-~~~~e~i~~~~~~~~~~g~~~~~~ 228 (239)
+|+.|+++.+.+.+ +.+.+....+. .........+|++|+++|||+| ++++++|+++++|++++...+.++
T Consensus 235 ~s~~e~~~~i~~~~-g~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~l~~~~~~~~~~~~~~~~~ 309 (313)
T 3ehe_A 235 IKVKRIAEIVCEEL-GLSPRFRFTGGDRGWKGDVPVMLLSIEKLKRLGWKPRYNSEEAVRMAVRDLVEDLDEEGHH 309 (313)
T ss_dssp EEHHHHHHHHHHHT-TCCCEEEEC------------CCBCCHHHHHHTCCCSCCHHHHHHHHHHHHHHHHHC----
T ss_pred eeHHHHHHHHHHHh-CCCCceEECCCccCCccccceeccCHHHHHHcCCCCCCCHHHHHHHHHHHHHhCccccccc
Confidence 99999999999997 44322222111 1223455789999998899999 899999999999999887666555
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-33 Score=226.52 Aligned_cols=210 Identities=19% Similarity=0.197 Sum_probs=170.6
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+++|+.++.+|+++|++.++++|||+|| .++|+..... .+++|+++. .|.+.|+.+|.++|.+++.++++.
T Consensus 122 ~~~nv~~~~~ll~a~~~~~~~~~v~~SS-~~vy~~~~~~--~~~~E~~~~------~p~~~Y~~sK~~~E~~~~~~~~~~ 192 (346)
T 4egb_A 122 YDTNVIGTVTLLELVKKYPHIKLVQVST-DEVYGSLGKT--GRFTEETPL------APNSPYSSSKASADMIALAYYKTY 192 (346)
T ss_dssp HHHHTHHHHHHHHHHHHSTTSEEEEEEE-GGGGCCCCSS--CCBCTTSCC------CCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEeCc-hHHhCCCCcC--CCcCCCCCC------CCCChhHHHHHHHHHHHHHHHHHh
Confidence 5789999999999999999999999999 5999876321 278888763 568899999999999999999888
Q ss_pred CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCc-cC--CCCCCceehHHHHHHHHHhhcCCCCCceEEEe-cCCC
Q 026418 82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKT-YA--NSVQAYVHVRDVALAHILVYETPSASGRYLCA-ESVL 157 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~ 157 (239)
+++++++||+.+|||+.... .....++..+..+.... ++ +..++|+|++|+|++++.++.++..+++||++ ++++
T Consensus 193 g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~g~~~~i~~~~~~ 271 (346)
T 4egb_A 193 QLPVIVTRCSNNYGPYQYPE-KLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGRVGEVYNIGGNNEK 271 (346)
T ss_dssp CCCEEEEEECEEESTTCCTT-SHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHHHCCTTCEEEECCSCCE
T ss_pred CCCEEEEeecceeCcCCCcc-chHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHhcCCCCCEEEECCCCce
Confidence 99999999999999986543 34456677788887655 34 45679999999999999999877655599887 6789
Q ss_pred CHHHHHHHHHHhCCCCCCC-CCCCCCCCCCCCCcccChHHHHh-hCCce-eCHHHHHHHHHHHHHHcC
Q 026418 158 HRGEVVEILAKFFPEYPIP-TKCSDEKNPRKKPYKFSNQKLKD-LGLEF-TPVKQCLYETVKSLQEKG 222 (239)
Q Consensus 158 s~~el~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~k~~~-lg~~p-~~~~e~i~~~~~~~~~~g 222 (239)
|+.|+++.+.+.+ +.+.+ .............+.+|++|+++ |||+| ++++++|+++++|+++++
T Consensus 272 s~~e~~~~i~~~~-g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~ 338 (346)
T 4egb_A 272 TNVEVVEQIITLL-GKTKKDIEYVTDRLGHDRRYAINAEKMKNEFDWEPKYTFEQGLQETVQWYEKNE 338 (346)
T ss_dssp EHHHHHHHHHHHH-TCCGGGCEEECC--CCCSCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCH
T ss_pred eHHHHHHHHHHHh-CCCcccccccCCCCCCcceeeccHHHHHHHcCCCCCCCHHHHHHHHHHHHHhhh
Confidence 9999999999997 44332 22222233345667899999975 99999 799999999999998764
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-33 Score=226.67 Aligned_cols=210 Identities=16% Similarity=0.092 Sum_probs=169.4
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+++|+.++.+|+++|++.++++|||+|| .++|+..... +++|+++. .|.+.|+.+|..+|++++.++++.
T Consensus 124 ~~~nv~~~~~ll~a~~~~~~~~~v~~SS-~~vyg~~~~~---~~~E~~~~------~p~~~Y~~sK~~~E~~~~~~~~~~ 193 (351)
T 3ruf_A 124 NATNITGFLNILHAAKNAQVQSFTYAAS-SSTYGDHPAL---PKVEENIG------NPLSPYAVTKYVNEIYAQVYARTY 193 (351)
T ss_dssp HHHHTHHHHHHHHHHHHTTCSEEEEEEE-GGGGTTCCCS---SBCTTCCC------CCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEEec-HHhcCCCCCC---CCccCCCC------CCCChhHHHHHHHHHHHHHHHHHh
Confidence 4789999999999999999999999999 5999877655 78898873 568899999999999999999888
Q ss_pred CccEEEEecCcccCCCCCCCC---ChhHHHHHHHHcCCCCcc-C--CCCCCceehHHHHHHHHHhhcCC-C-CCceEEEe
Q 026418 82 GVDLVVVNPVLVLGPLLQSTV---NASIIHILKYLNGSAKTY-A--NSVQAYVHVRDVALAHILVYETP-S-ASGRYLCA 153 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~-~--~~~~~~i~v~D~a~~~~~~~~~~-~-~~~~y~~~ 153 (239)
|++++++||+++|||+..... .....++..+..+..+.. + +..++|+|++|+|++++.++... . .+++||++
T Consensus 194 g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~ 273 (351)
T 3ruf_A 194 GFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSALAKDSAKDNIYNVA 273 (351)
T ss_dssp CCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGGGCSEEEEES
T ss_pred CCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhhccccCCCEEEeC
Confidence 999999999999999865431 234456677888877653 3 45789999999999999998872 3 33499887
Q ss_pred -cCCCCHHHHHHHHHHhCCCC----CCCCCCCCCCCCCCCCcccChHHHHh-hCCce-eCHHHHHHHHHHHHHHc
Q 026418 154 -ESVLHRGEVVEILAKFFPEY----PIPTKCSDEKNPRKKPYKFSNQKLKD-LGLEF-TPVKQCLYETVKSLQEK 221 (239)
Q Consensus 154 -~~~~s~~el~~~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p-~~~~e~i~~~~~~~~~~ 221 (239)
++.+|+.|+++.+.+.++.. ..+...............+|++|+++ |||+| ++++++|+++++|++++
T Consensus 274 ~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~ 348 (351)
T 3ruf_A 274 VGDRTTLNELSGYIYDELNLIHHIDKLSIKYREFRSGDVRHSQADVTKAIDLLKYRPNIKIREGLRLSMPWYVRF 348 (351)
T ss_dssp CSCCEEHHHHHHHHHHHHHTTCCC-----EEECCCTTCCSBCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_pred CCCcccHHHHHHHHHHHhCcccccccccccccCCCCCccceeeeCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence 78999999999999997331 12221222233455678999999987 99999 79999999999999864
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-32 Score=221.02 Aligned_cols=214 Identities=22% Similarity=0.184 Sum_probs=168.7
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCc-hHHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKN-WYCYGKAVAEKAAWEEAVA 80 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~-~Y~~sK~~~E~~~~~~~~~ 80 (239)
+++|+.++.+|+++|++.++++|||+|| .++|+..... +++|+++... +..|.+ +|+.+|..+|++++.++++
T Consensus 86 ~~~nv~gt~~ll~a~~~~~~~~~v~~SS-~~vyg~~~~~---~~~E~~~~~~--~~~p~~~~Y~~sK~~~E~~~~~~~~~ 159 (319)
T 4b8w_A 86 WRKNVHMNDNVLHSAFEVGARKVVSCLS-TCIFPDKTTY---PIDETMIHNG--PPHNSNFGYSYAKRMIDVQNRAYFQQ 159 (319)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEECC-GGGSCSSCCS---SBCGGGGGBS--CCCSSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCeEEEEcc-hhhcCCCCCC---CccccccccC--CCCCCcchHHHHHHHHHHHHHHHHHh
Confidence 5789999999999999999999999999 4999877655 7888863211 123445 6999999999999999988
Q ss_pred cCccEEEEecCcccCCCCCCC---CChhHHHHHH----HHcCCCCc-cC--CCCCCceehHHHHHHHHHhhcCCCC-Cc-
Q 026418 81 RGVDLVVVNPVLVLGPLLQST---VNASIIHILK----YLNGSAKT-YA--NSVQAYVHVRDVALAHILVYETPSA-SG- 148 (239)
Q Consensus 81 ~~~~~~i~Rp~~v~G~~~~~~---~~~~~~~~~~----~~~~~~~~-~~--~~~~~~i~v~D~a~~~~~~~~~~~~-~~- 148 (239)
.+++++++||+++|||+.... ......++.. +..+..+. ++ +..++|+|++|+|++++.++.++.. .+
T Consensus 160 ~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~ 239 (319)
T 4b8w_A 160 YGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIWVLREYNEVEPI 239 (319)
T ss_dssp HCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHHHHHHHHHHCCCSSCE
T ss_pred hCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHHHHHHHHhccccCCce
Confidence 899999999999999986532 1233344454 66777654 34 4567999999999999999987433 23
Q ss_pred eEEEe-cCCCCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcccChHHHHh-hCCce-eCHHHHHHHHHHHHHHcC
Q 026418 149 RYLCA-ESVLHRGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKD-LGLEF-TPVKQCLYETVKSLQEKG 222 (239)
Q Consensus 149 ~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p-~~~~e~i~~~~~~~~~~g 222 (239)
+||++ ++++|+.|+++.+.+.+ +.+.+....+..........+|++|+++ |||.| ++++++|+++++|++++.
T Consensus 240 ~~ni~~~~~~s~~e~~~~i~~~~-g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~ 315 (319)
T 4b8w_A 240 ILSVGEEDEVSIKEAAEAVVEAM-DFHGEVTFDTTKSDGQFKKTASNSKLRTYLPDFRFTPFKQAVKETCAWFTDNY 315 (319)
T ss_dssp EECCCGGGCEEHHHHHHHHHHHT-TCCSCEEEETTSCCCCSCCCBCCHHHHHHCTTCCCCCHHHHHHHHHHHHHHSC
T ss_pred EEEecCCCceeHHHHHHHHHHHh-CCCCcEEeCCCCCcCcccccCCHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHH
Confidence 89877 79999999999999997 5544444333334445667899999987 89999 999999999999998753
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-32 Score=220.11 Aligned_cols=208 Identities=21% Similarity=0.174 Sum_probs=164.9
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+++|+.++.+++++|++.++++|||+|| .++|+..... +++|+++ ..|.+.|+.+|..+|.+++.++++.
T Consensus 86 ~~~n~~~~~~l~~a~~~~~~~~iv~~SS-~~vyg~~~~~---~~~e~~~------~~p~~~Y~~sK~~~e~~~~~~~~~~ 155 (312)
T 3ko8_A 86 FNENVVATFNVLEWARQTGVRTVVFASS-STVYGDADVI---PTPEEEP------YKPISVYGAAKAAGEVMCATYARLF 155 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEEEEE-GGGGCSCSSS---SBCTTSC------CCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEeCc-HHHhCCCCCC---CCCCCCC------CCCCChHHHHHHHHHHHHHHHHHHh
Confidence 4689999999999999999999999999 5999877655 7888876 3568899999999999999999888
Q ss_pred CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCC--ccC--CCCCCceehHHHHHHHHHhhcC---CCC-CceEEEe
Q 026418 82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAK--TYA--NSVQAYVHVRDVALAHILVYET---PSA-SGRYLCA 153 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~i~v~D~a~~~~~~~~~---~~~-~~~y~~~ 153 (239)
+++++++||+++|||.... .....++..+..+... .++ +..++|+|++|+|++++.++.+ ... +++||++
T Consensus 156 g~~~~~lrp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~ni~ 233 (312)
T 3ko8_A 156 GVRCLAVRYANVVGPRLRH--GVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPFLALNVG 233 (312)
T ss_dssp CCEEEEEEECEEECTTCCS--SHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHSCCSEEEEEES
T ss_pred CCCEEEEeeccccCcCCCC--ChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccccCCCCcEEEEc
Confidence 9999999999999997643 3344566667666432 244 4568999999999999999987 333 3499887
Q ss_pred -cCCCCHHHHHHHHHHhCCCCCCCCCCCC------CCCCCCCCcccChHHHHh-hCCce-eCHHHHHHHHHHHHHHcC
Q 026418 154 -ESVLHRGEVVEILAKFFPEYPIPTKCSD------EKNPRKKPYKFSNQKLKD-LGLEF-TPVKQCLYETVKSLQEKG 222 (239)
Q Consensus 154 -~~~~s~~el~~~i~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~k~~~-lg~~p-~~~~e~i~~~~~~~~~~g 222 (239)
++.+|+.|+++.+.+.+ +.+.+....+ ..........+|++|+++ |||+| ++++++|+++++|++++|
T Consensus 234 ~~~~~s~~e~~~~i~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~ 310 (312)
T 3ko8_A 234 NVDAVRVLDIAQIVAEVL-GLRPEIRLVPSTPDGRGWPGDVKYMTLAVTKLMKLTGWRPTMTSAEAVKKTAEDLAKEL 310 (312)
T ss_dssp CSSCEEHHHHHHHHHHHH-TCCCEEEEC----------CCCSEECBCCHHHHHHHCCCCSSCHHHHHHHHHHHHHHHH
T ss_pred CCCceeHHHHHHHHHHHh-CCCCceeecCccccccCCCCCccccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhhh
Confidence 78899999999999997 4332222111 012334567899999955 99999 799999999999999875
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-32 Score=218.22 Aligned_cols=210 Identities=14% Similarity=0.100 Sum_probs=173.3
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
++ |+.++.+++++|++.++++|||+|| .++|+..... +++|+++ ..|.+.|+.+|..+|.+++.++++.
T Consensus 93 ~~-n~~~~~~ll~a~~~~~v~~~v~~SS-~~v~~~~~~~---~~~E~~~------~~p~~~Y~~sK~~~E~~~~~~~~~~ 161 (321)
T 3vps_A 93 LD-NVDSGRHLLALCTSVGVPKVVVGST-CEVYGQADTL---PTPEDSP------LSPRSPYAASKVGLEMVAGAHQRAS 161 (321)
T ss_dssp HH-HHHHHHHHHHHHHHHTCCEEEEEEE-GGGGCSCSSS---SBCTTSC------CCCCSHHHHHHHHHHHHHHHHHHSS
T ss_pred HH-HHHHHHHHHHHHHHcCCCeEEEecC-HHHhCCCCCC---CCCCCCC------CCCCChhHHHHHHHHHHHHHHHHHc
Confidence 45 9999999999999999999999999 5999887655 7888876 3568999999999999999999888
Q ss_pred Cc-cEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCc-cC--CCCCCceehHHHHHHHHHhhcCCCCCceEEEe-cCC
Q 026418 82 GV-DLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKT-YA--NSVQAYVHVRDVALAHILVYETPSASGRYLCA-ESV 156 (239)
Q Consensus 82 ~~-~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~ 156 (239)
++ +++++||+.+|||+.... .....++..+..+..+. ++ +..++|+|++|+|++++.++.++..+ +||++ +++
T Consensus 162 ~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~g-~~~i~~~~~ 239 (321)
T 3vps_A 162 VAPEVGIVRFFNVYGPGERPD-ALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRPLPS-VVNFGSGQS 239 (321)
T ss_dssp SSCEEEEEEECEEECTTCCTT-SHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGSCCCS-EEEESCSCC
T ss_pred CCCceEEEEeccccCcCCCCC-ChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhcCCCC-eEEecCCCc
Confidence 99 999999999999986542 33445667777776654 33 45679999999999999999987664 99887 788
Q ss_pred CCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcccChHHHHh-hCCce--eCHHHHHHHHHHHHHHcCCCCC
Q 026418 157 LHRGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKD-LGLEF--TPVKQCLYETVKSLQEKGHLPI 226 (239)
Q Consensus 157 ~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p--~~~~e~i~~~~~~~~~~g~~~~ 226 (239)
+|+.|+++.+. .+ +.+.+....+..........+|++|+++ |||+| ++++++|+++++|+++++....
T Consensus 240 ~s~~e~~~~i~-~~-g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~~l~~~~~~~~~~~~~~~ 310 (321)
T 3vps_A 240 LSVNDVIRILQ-AT-SPAAEVARKQPRPNEITEFRADTALQTRQIGERSGGIGIEEGIRLTLEWWQSRDLDDI 310 (321)
T ss_dssp EEHHHHHHHHH-TT-CTTCEEEEECCCTTCCSBCCBCCHHHHHHHCCCSCCCCHHHHHHHHHHHHHTSCTTC-
T ss_pred ccHHHHHHHHH-Hh-CCCCccccCCCCCCCcceeeccHHHHHHHhCCCCCcCCHHHHHHHHHHHHHhCCCchh
Confidence 99999999999 86 5554443333344456788999999987 99999 9999999999999998876443
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-31 Score=217.27 Aligned_cols=226 Identities=36% Similarity=0.647 Sum_probs=167.6
Q ss_pred CchhHhHHHHHHHHHHHhcC-CCEEEEccchhhhccCCCCCCCccccCCCCCChhh--cc-cCCchHHHHHHHHHHHHHH
Q 026418 1 MVEPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEF--CK-NTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 1 ~~~~Nv~~t~~ll~a~~~~~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~--~~-~~~~~Y~~sK~~~E~~~~~ 76 (239)
++++|+.||.+++++|++.+ +++|||+||.+++|+..... .+++|+++...+. +. .+.+.|+.+|.++|.+++.
T Consensus 99 ~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~--~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 176 (337)
T 2c29_D 99 VIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQL--PVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWK 176 (337)
T ss_dssp THHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCC--SEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCC--cccCcccCCchhhhcccCCccchHHHHHHHHHHHHHH
Confidence 35789999999999999988 89999999965577653322 2578876544321 11 2456799999999999999
Q ss_pred HHHHcCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCC-CCCCceehHHHHHHHHHhhcCCCCCceEEEecC
Q 026418 77 EAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYAN-SVQAYVHVRDVALAHILVYETPSASGRYLCAES 155 (239)
Q Consensus 77 ~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~~~ 155 (239)
+++..|++++++||+++|||..................|....++. ....|+|++|+|+++++++.++...++|++++.
T Consensus 177 ~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~ 256 (337)
T 2c29_D 177 YAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNAHIYLFENPKAEGRYICSSH 256 (337)
T ss_dssp HHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGGHHHHTEEEEEEHHHHHHHHHHHHHCTTCCEEEEECCE
T ss_pred HHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCccccccCCCCEEEHHHHHHHHHHHhcCcccCceEEEeCC
Confidence 8877899999999999999986543322211111224454333321 123499999999999999987655568888877
Q ss_pred CCCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcccChHHHHhhCCce-eCHHHHHHHHHHHHHHcCCCCCCcc
Q 026418 156 VLHRGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKDLGLEF-TPVKQCLYETVKSLQEKGHLPIPTQ 229 (239)
Q Consensus 156 ~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~p-~~~~e~i~~~~~~~~~~g~~~~~~~ 229 (239)
.+|+.|+++.+.+.+|...++...... ........+|++|+++|||+| ++++++|+++++|+++.|.++.+.+
T Consensus 257 ~~s~~e~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~d~~k~~~lG~~p~~~l~e~l~~~~~~~~~~~~~~~~~~ 330 (337)
T 2c29_D 257 DCIILDLAKMLREKYPEYNIPTEFKGV-DENLKSVCFSSKKLTDLGFEFKYSLEDMFTGAVDTCRAKGLLPPSHE 330 (337)
T ss_dssp EEEHHHHHHHHHHHCTTSCCCSCCTTC-CTTCCCCEECCHHHHHHTCCCCCCHHHHHHHHHHHHHHTTSSCSCC-
T ss_pred CCCHHHHHHHHHHHCCCccCCCCCCcc-cCCCccccccHHHHHHcCCCcCCCHHHHHHHHHHHHHHcCCCCcccc
Confidence 799999999999987655555433321 123456788999997799999 8999999999999999999977663
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-32 Score=216.53 Aligned_cols=207 Identities=24% Similarity=0.227 Sum_probs=163.4
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccC-CCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMD-PNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA 80 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~-~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 80 (239)
+++|+.++.+++++|++.++++|||+||.+++|+. .... +++|+++ ..|.+.|+.+|.++|.+++.++++
T Consensus 90 ~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~---~~~E~~~------~~~~~~Y~~sK~~~e~~~~~~~~~ 160 (311)
T 2p5y_A 90 FEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGE---RAEETWP------PRPKSPYAASKAAFEHYLSVYGQS 160 (311)
T ss_dssp HHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTC---CBCTTSC------CCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCC---CcCCCCC------CCCCChHHHHHHHHHHHHHHHHHH
Confidence 57899999999999999999999999994489986 3333 6788765 346789999999999999999888
Q ss_pred cCccEEEEecCcccCCCCCCCC--ChhHHHHHHHHcCCCCc-c-----CC--CCCCceehHHHHHHHHHhhcCCCCCceE
Q 026418 81 RGVDLVVVNPVLVLGPLLQSTV--NASIIHILKYLNGSAKT-Y-----AN--SVQAYVHVRDVALAHILVYETPSASGRY 150 (239)
Q Consensus 81 ~~~~~~i~Rp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~-~-----~~--~~~~~i~v~D~a~~~~~~~~~~~~~~~y 150 (239)
.+++++++||+++|||...... .....++..+.++.++. + ++ ..++|+|++|+|++++.++..+ +++|
T Consensus 161 ~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~--~~~~ 238 (311)
T 2p5y_A 161 YGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALALFSL--EGIY 238 (311)
T ss_dssp HCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHHHHHHHC--CEEE
T ss_pred cCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHHHHHhCC--CCEE
Confidence 8999999999999999765432 12334456666776543 3 43 4578999999999999998764 4599
Q ss_pred EEe-cCCCCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcccChHHHHhhCCce-eCHHHHHHHHHHHHHH
Q 026418 151 LCA-ESVLHRGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKDLGLEF-TPVKQCLYETVKSLQE 220 (239)
Q Consensus 151 ~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~p-~~~~e~i~~~~~~~~~ 220 (239)
|++ +.++|+.|+++.+.+.+ +.+.+....+..........+|++|+++|||+| ++++++|+++++|+++
T Consensus 239 ~i~~~~~~s~~e~~~~i~~~~-g~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~~~~~l~~~~~~~~~ 309 (311)
T 2p5y_A 239 NVGTGEGHTTREVLMAVAEAA-GKAPEVQPAPPRPGDLERSVLSPLKLMAHGWRPKVGFQEGIRLTVDHFRG 309 (311)
T ss_dssp EESCSCCEEHHHHHHHHHHHH-TCCCCEEEECCCTTCCSBCCBCCHHHHTTTCCCSSCHHHHHHHHHHHHHT
T ss_pred EeCCCCCccHHHHHHHHHHHh-CCCCCceeCCCCccchhhccCCHHHHHHCCCCCCCCHHHHHHHHHHHHHh
Confidence 887 78899999999999987 444433322222333456889999997799999 9999999999999964
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-31 Score=216.98 Aligned_cols=210 Identities=19% Similarity=0.179 Sum_probs=165.8
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+++|+.++.+++++|++.++++|||+|| .++||..... +++|+.+. .|.+.|+.+|.++|.+++.++++.
T Consensus 102 ~~~n~~~~~~l~~~~~~~~~~~iv~~SS-~~~~g~~~~~---~~~e~~~~------~~~~~Y~~sK~~~e~~~~~~~~~~ 171 (341)
T 3enk_A 102 YRNNLDSLLSLLRVMRERAVKRIVFSSS-ATVYGVPERS---PIDETFPL------SATNPYGQTKLMAEQILRDVEAAD 171 (341)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEEEE-GGGBCSCSSS---SBCTTSCC------BCSSHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEEec-ceEecCCCCC---CCCCCCCC------CCCChhHHHHHHHHHHHHHHhhcC
Confidence 5689999999999999999999999999 5999876654 78888763 567899999999999999998877
Q ss_pred C-ccEEEEecCcccCCCCCC------C--CChhHHHHHHHHcCCCC--c-c--------CCCCCCceehHHHHHHHHHhh
Q 026418 82 G-VDLVVVNPVLVLGPLLQS------T--VNASIIHILKYLNGSAK--T-Y--------ANSVQAYVHVRDVALAHILVY 141 (239)
Q Consensus 82 ~-~~~~i~Rp~~v~G~~~~~------~--~~~~~~~~~~~~~~~~~--~-~--------~~~~~~~i~v~D~a~~~~~~~ 141 (239)
+ ++++++||+++|||+... . .......+.....+... . + ++..++|+|++|+|++++.++
T Consensus 172 ~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~ 251 (341)
T 3enk_A 172 PSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYIHVVDLARGHIAAL 251 (341)
T ss_dssp TTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHH
T ss_pred CCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEeeEEHHHHHHHHHHHH
Confidence 5 999999999999986421 1 12222344444444321 1 2 345678999999999999998
Q ss_pred cCC---CCCceEEEe-cCCCCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcccChHHHHh-hCCce-eCHHHHHHHHH
Q 026418 142 ETP---SASGRYLCA-ESVLHRGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKD-LGLEF-TPVKQCLYETV 215 (239)
Q Consensus 142 ~~~---~~~~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p-~~~~e~i~~~~ 215 (239)
.+. ..+++||++ ++++|+.|+++.+.+.+ +.+.+....+..........+|++|+++ |||+| ++++++|++++
T Consensus 252 ~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~-g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~ 330 (341)
T 3enk_A 252 DALERRDASLTVNLGTGRGYSVLEVVRAFEKAS-GRAVPYELVARRPGDVAECYANPAAAAETIGWKAERDLERMCADHW 330 (341)
T ss_dssp HHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHH-CSCCCEEEECCCTTCCSEECBCCHHHHHHHCCCCCCCHHHHHHHHH
T ss_pred HhhhcCCcceEEEeCCCCceeHHHHHHHHHHHh-CCCcceeeCCCCCCCccccccCHHHHHHHcCCCCCCCHHHHHHHHH
Confidence 762 344599886 78999999999999997 5555544444444556678899999975 99999 99999999999
Q ss_pred HHHHHcC
Q 026418 216 KSLQEKG 222 (239)
Q Consensus 216 ~~~~~~g 222 (239)
+|++++.
T Consensus 331 ~~~~~~~ 337 (341)
T 3enk_A 331 RWQENNP 337 (341)
T ss_dssp HHHHHST
T ss_pred HHHHhcC
Confidence 9999764
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-32 Score=218.30 Aligned_cols=223 Identities=36% Similarity=0.534 Sum_probs=161.5
Q ss_pred CchhHhHHHHHHHHHHHhcC-CCEEEEccchhhhccCCCCCCCccccCCCCCChhh--cccC-CchHHHHHHHHHHHHHH
Q 026418 1 MVEPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEF--CKNT-KNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 1 ~~~~Nv~~t~~ll~a~~~~~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~--~~~~-~~~Y~~sK~~~E~~~~~ 76 (239)
++++|+.||.+++++|++.+ +++|||+||.+++|+........+++|+++...+. +..| ...|+.+|.++|.+++.
T Consensus 102 ~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 181 (338)
T 2rh8_A 102 MIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWK 181 (338)
T ss_dssp -CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCCCCCTTSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCccchHHHHHHHHHHHHHH
Confidence 36789999999999999986 99999999964466543211112678876543221 1112 22699999999999999
Q ss_pred HHHHcCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccC--------CCCCCceehHHHHHHHHHhhcCCCCCc
Q 026418 77 EAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYA--------NSVQAYVHVRDVALAHILVYETPSASG 148 (239)
Q Consensus 77 ~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~i~v~D~a~~~~~~~~~~~~~~ 148 (239)
+.+..|++++++||+++|||............+.....|....++ .+.++|+|++|+|++++.+++++...+
T Consensus 182 ~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~ 261 (338)
T 2rh8_A 182 FAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGSVSIAHVEDVCRAHIFVAEKESASG 261 (338)
T ss_dssp HHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHSSEEEEEHHHHHHHHHHHHHCTTCCE
T ss_pred HHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCccccccccccccccCcccEEEHHHHHHHHHHHHcCCCcCC
Confidence 887779999999999999998654333222223333455433222 233489999999999999998765556
Q ss_pred eEEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcccChHHHHhhCCce-eCHHHHHHHHHHHHHHcCCCC
Q 026418 149 RYLCAESVLHRGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKDLGLEF-TPVKQCLYETVKSLQEKGHLP 225 (239)
Q Consensus 149 ~y~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~p-~~~~e~i~~~~~~~~~~g~~~ 225 (239)
+|++++..+|+.|+++.+.+.++..++|....+. . ......+|++|+++|||+| ++++++|+++++|+++.|.++
T Consensus 262 ~~~~~~~~~s~~e~~~~l~~~~~~~~~~~~~~~~-~-~~~~~~~d~~k~~~lG~~p~~~l~~gl~~~~~~~~~~~~~~ 337 (338)
T 2rh8_A 262 RYICCAANTSVPELAKFLSKRYPQYKVPTDFGDF-P-PKSKLIISSEKLVKEGFSFKYGIEEIYDESVEYFKAKGLLQ 337 (338)
T ss_dssp EEEECSEEECHHHHHHHHHHHCTTSCCCCCCTTS-C-SSCSCCCCCHHHHHHTCCCSCCHHHHHHHHHHHHHHTTCC-
T ss_pred cEEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCC-C-cCcceeechHHHHHhCCCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 8988877799999999999987545554433321 1 1123788999997799999 899999999999999988764
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.98 E-value=2.2e-31 Score=214.12 Aligned_cols=219 Identities=29% Similarity=0.450 Sum_probs=162.7
Q ss_pred chhHhHHHHHHHHHHHhc-CCCEEEEccchhhhccCCCCCCCccccCCCCCChhh--cccCCc-hHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA-KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEF--CKNTKN-WYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~-~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~--~~~~~~-~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.|+.+++++|.+. ++++|||+||.+++|+.... ..+++|+++..... +..|.. .|+.+|.++|.+++++
T Consensus 97 ~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~--~~~~~e~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~ 174 (322)
T 2p4h_X 97 TKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKD--KDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEF 174 (322)
T ss_dssp HHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSC--CSEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCC--CeecCCccccchhhhcccCcccccHHHHHHHHHHHHHHH
Confidence 578999999999999998 78999999996556654322 12678876544322 112333 6999999999999999
Q ss_pred HHHcCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCceEEEecCCC
Q 026418 78 AVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVL 157 (239)
Q Consensus 78 ~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~~~~~ 157 (239)
++..|++++++||+++|||............+.....|....++....+|+|++|+|++++.++.++...|.||++++.+
T Consensus 175 ~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~g~~~~~~~~~ 254 (322)
T 2p4h_X 175 GEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDDVARAHIYLLENSVPGGRYNCSPFIV 254 (322)
T ss_dssp HHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGCCEEEEEEEEHHHHHHHHHHHHHSCCCCEEEECCCEEE
T ss_pred HHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccCcCCCcCEEEHHHHHHHHHHHhhCcCCCCCEEEcCCCC
Confidence 87789999999999999997543322222222334455544444333489999999999999997655556898778889
Q ss_pred CHHHHHHHHHHhCCCCCCCCC--CCCCCCCCCCCcccChHHHHhhCCce-eCHHHHHHHHHHHHHHcCCC
Q 026418 158 HRGEVVEILAKFFPEYPIPTK--CSDEKNPRKKPYKFSNQKLKDLGLEF-TPVKQCLYETVKSLQEKGHL 224 (239)
Q Consensus 158 s~~el~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~k~~~lg~~p-~~~~e~i~~~~~~~~~~g~~ 224 (239)
|+.|+++.+.+.++..++|.. ... .. ......+|++|+++|||+| ++++++|+++++|+++.|.+
T Consensus 255 s~~e~~~~i~~~~~~~~~~~~~~~~~-~~-~~~~~~~d~~k~~~lG~~p~~~~~~~l~~~~~~~~~~~~~ 322 (322)
T 2p4h_X 255 PIEEMSQLLSAKYPEYQILTVDELKE-IK-GARLPDLNTKKLVDAGFDFKYTIEDMFDDAIQCCKEKGYL 322 (322)
T ss_dssp EHHHHHHHHHHHCTTSCCCCTTTTTT-CC-CEECCEECCHHHHHTTCCCCCCHHHHHHHHHHHHHHHTCC
T ss_pred CHHHHHHHHHHhCCCCCCCCCccccC-CC-CCcceecccHHHHHhCCccCCCHHHHHHHHHHHHHhcCCC
Confidence 999999999998765555433 111 11 1145788999997799999 79999999999999988754
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.98 E-value=5.7e-31 Score=212.51 Aligned_cols=210 Identities=21% Similarity=0.238 Sum_probs=161.7
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+++|+.++.+|+++|++.++++|||+|| .++|+..... +++|+++. .|.+.|+.+|..+|.+++.++++.
T Consensus 91 ~~~n~~~~~~l~~a~~~~~~~~~v~~Ss-~~~~~~~~~~---~~~E~~~~------~~~~~Y~~sK~~~e~~~~~~~~~~ 160 (330)
T 2c20_A 91 YNNNVYGALCLLEVMDEFKVDKFIFSST-AATYGEVDVD---LITEETMT------NPTNTYGETKLAIEKMLHWYSQAS 160 (330)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEECC-GGGGCSCSSS---SBCTTSCC------CCSSHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHhHHHHHHHHHHHHcCCCEEEEeCC-ceeeCCCCCC---CCCcCCCC------CCCChHHHHHHHHHHHHHHHHHHh
Confidence 5689999999999999999999999999 5999876544 78888763 567899999999999999998888
Q ss_pred CccEEEEecCcccCCCCCCC-------CChhHHHHHHHHcCC-C-Cc-c--------CCCCCCceehHHHHHHHHHhhcC
Q 026418 82 GVDLVVVNPVLVLGPLLQST-------VNASIIHILKYLNGS-A-KT-Y--------ANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~-------~~~~~~~~~~~~~~~-~-~~-~--------~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
+++++++||+++||++.... .......+.....+. . +. + ++..++|+|++|+|++++.++++
T Consensus 161 ~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~~~~ 240 (330)
T 2c20_A 161 NLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAAHFLGLKD 240 (330)
T ss_dssp SCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHHHHHHHHHHHH
T ss_pred CCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHHHHHHHHHHhc
Confidence 99999999999999963211 112222333333332 2 21 2 23467899999999999999875
Q ss_pred CC---CCceEEEe-cCCCCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcccChHHHHh-hCCce-e-CHHHHHHHHHH
Q 026418 144 PS---ASGRYLCA-ESVLHRGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKD-LGLEF-T-PVKQCLYETVK 216 (239)
Q Consensus 144 ~~---~~~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p-~-~~~e~i~~~~~ 216 (239)
+. .+++||++ ++++|+.|+++.+.+.+ +.+++....+..........+|++|+++ |||+| + +++++|+++++
T Consensus 241 ~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~-g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~l~~~l~~~~~ 319 (330)
T 2c20_A 241 LQNGGESDFYNLGNGNGFSVKEIVDAVREVT-NHEIPAEVAPRRAGDPARLVASSQKAKEKLGWDPRYVNVKTIIEHAWN 319 (330)
T ss_dssp HHTTCCCEEEECCCTTCBCHHHHHHHHHHHT-TSCCCEEEECCCSSCCSEECBCCHHHHHHHCCCCSCCCHHHHHHHHHH
T ss_pred cccCCCCCeEEeCCCCCccHHHHHHHHHHHh-CCCCceeeCCCCCCcccccccCHHHHHHHhCCCCccCCHHHHHHHHHH
Confidence 42 23599987 78899999999999997 5544433333223344568899999976 99999 6 99999999999
Q ss_pred HHHHcC
Q 026418 217 SLQEKG 222 (239)
Q Consensus 217 ~~~~~g 222 (239)
|++++.
T Consensus 320 ~~~~~~ 325 (330)
T 2c20_A 320 WHQKQP 325 (330)
T ss_dssp HHHHCS
T ss_pred HHHHhh
Confidence 998764
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-31 Score=217.75 Aligned_cols=209 Identities=21% Similarity=0.229 Sum_probs=165.4
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+++|+.++.+++++|++.++++|||+|| .++|+.... ...+++|+++ ..|.+.|+.+|.++|++++.++++.
T Consensus 99 ~~~nv~~~~~ll~a~~~~~~~~~V~~SS-~~vyg~~~~-~~~~~~E~~~------~~~~~~Y~~sK~~~E~~~~~~~~~~ 170 (347)
T 4id9_A 99 FAVNVEGTRRLLDAASAAGVRRFVFASS-GEVYPENRP-EFLPVTEDHP------LCPNSPYGLTKLLGEELVRFHQRSG 170 (347)
T ss_dssp HHHHTHHHHHHHHHHHHTTCSEEEEEEE-GGGTTTTSC-SSSSBCTTSC------CCCCSHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHcCCCeEEEECC-HHHhCCCCC-CCCCcCCCCC------CCCCChHHHHHHHHHHHHHHHHHhc
Confidence 5789999999999999999999999999 599987321 1227888876 3568899999999999999999889
Q ss_pred CccEEEEecCccc-------------CCCCCCC----------CChhHHHHHHHHcCCCCc-c--CCCCCCc----eehH
Q 026418 82 GVDLVVVNPVLVL-------------GPLLQST----------VNASIIHILKYLNGSAKT-Y--ANSVQAY----VHVR 131 (239)
Q Consensus 82 ~~~~~i~Rp~~v~-------------G~~~~~~----------~~~~~~~~~~~~~~~~~~-~--~~~~~~~----i~v~ 131 (239)
+++++++||+.+| ||+.... ......++..+..+.+.. + ++..++| +|++
T Consensus 171 ~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~ 250 (347)
T 4id9_A 171 AMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARNENGRPFRMHITDTR 250 (347)
T ss_dssp SSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEECTTCCBCEECEEEHH
T ss_pred CCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCCCCcccCCccCcEeHH
Confidence 9999999999999 7653221 223334556666776644 3 4567789 9999
Q ss_pred HHHHHHHHhhcCCC-CCceEEEe-cCCCCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcccChHHHHh-hCCce-eCH
Q 026418 132 DVALAHILVYETPS-ASGRYLCA-ESVLHRGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKD-LGLEF-TPV 207 (239)
Q Consensus 132 D~a~~~~~~~~~~~-~~~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p-~~~ 207 (239)
|+|++++.++.++. .+++||++ ++.+|+.|+++.+.+.+ +.+.+....+. ......+|++|+++ |||+| +++
T Consensus 251 Dva~ai~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~-g~~~~~~~~p~---~~~~~~~d~~k~~~~lG~~p~~~~ 326 (347)
T 4id9_A 251 DMVAGILLALDHPEAAGGTFNLGADEPADFAALLPKIAALT-GLPIVTVDFPG---DGVYYHTSNERIRNTLGFEAEWTM 326 (347)
T ss_dssp HHHHHHHHHHHCGGGTTEEEEESCSSCEEHHHHHHHHHHHH-CCCEEEEECSS---CCCBCCBCCHHHHHHHCCCCCCCH
T ss_pred HHHHHHHHHhcCcccCCCeEEECCCCcccHHHHHHHHHHHh-CCCCceeeCCC---cccccccCHHHHHHHhCCCCCCCH
Confidence 99999999998873 44599887 78899999999999997 54433322221 12278899999977 99999 799
Q ss_pred HHHHHHHHHHHHHcC
Q 026418 208 KQCLYETVKSLQEKG 222 (239)
Q Consensus 208 ~e~i~~~~~~~~~~g 222 (239)
+++|+++++|++++-
T Consensus 327 ~~~l~~~~~~~~~~~ 341 (347)
T 4id9_A 327 DRMLEEAATARRQRL 341 (347)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhhh
Confidence 999999999998754
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.4e-31 Score=213.88 Aligned_cols=213 Identities=18% Similarity=0.175 Sum_probs=163.1
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCC-chHHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK-NWYCYGKAVAEKAAWEEAVA 80 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~-~~Y~~sK~~~E~~~~~~~~~ 80 (239)
+++|+.++.+++++|++.++++|||+|| .++|+..... +++|+++.... ..|. +.|+.+|..+|.+++.++++
T Consensus 80 ~~~n~~~~~~l~~~~~~~~~~~~v~~SS-~~vyg~~~~~---~~~E~~~~~~~--~~p~~~~Y~~sK~~~E~~~~~~~~~ 153 (321)
T 1e6u_A 80 IYQNMMIESNIIHAAHQNDVNKLLFLGS-SCIYPKLAKQ---PMAESELLQGT--LEPTNEPYAIAKIAGIKLCESYNRQ 153 (321)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEECC-GGGSCTTCCS---SBCGGGTTSSC--CCGGGHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCeEEEEcc-HHHcCCCCCC---CcCccccccCC--CCCCCCccHHHHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999 5999876544 77887642211 2333 58999999999999999888
Q ss_pred cCccEEEEecCcccCCCCCCC---CChhHHHHHHHHc----C-CCCc-c--CCCCCCceehHHHHHHHHHhhcCCCC---
Q 026418 81 RGVDLVVVNPVLVLGPLLQST---VNASIIHILKYLN----G-SAKT-Y--ANSVQAYVHVRDVALAHILVYETPSA--- 146 (239)
Q Consensus 81 ~~~~~~i~Rp~~v~G~~~~~~---~~~~~~~~~~~~~----~-~~~~-~--~~~~~~~i~v~D~a~~~~~~~~~~~~--- 146 (239)
.+++++++||+.+|||+.... ......++..+.. | .... + ++..++|+|++|+|++++.++.++..
T Consensus 154 ~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~~~~~~~~~~~~~~ 233 (321)
T 1e6u_A 154 YGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWL 233 (321)
T ss_dssp HCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHHHHSCHHHHH
T ss_pred hCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHHHHHHHhCcccccc
Confidence 899999999999999986532 1233344555543 3 3332 3 44578999999999999999987654
Q ss_pred ------CceEEEe-cCCCCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcccChHHHHhhCCce-eCHHHHHHHHHHHH
Q 026418 147 ------SGRYLCA-ESVLHRGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKDLGLEF-TPVKQCLYETVKSL 218 (239)
Q Consensus 147 ------~~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~p-~~~~e~i~~~~~~~ 218 (239)
+++||++ ++++|+.|+++.+.+.+ +.+.+....+..........+|++|+++|||+| ++++++|+++++|+
T Consensus 234 ~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~-g~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~~~l~~~~~~~ 312 (321)
T 1e6u_A 234 ENTQPMLSHINVGTGVDCTIRELAQTIAKVV-GYKGRVVFDASKPDGTPRKLLDVTRLHQLGWYHEISLEAGLASTYQWF 312 (321)
T ss_dssp HTSBTTBCCEEESCSCCEEHHHHHHHHHHHH-TCCSEEEEETTSCCCCSBCCBCCHHHHHTTCCCCCCHHHHHHHHHHHH
T ss_pred cccccCCceEEeCCCCCccHHHHHHHHHHHh-CCCCceEeCCCCCCCcccccCCHHHHHhcCCccCCcHHHHHHHHHHHH
Confidence 3599886 78899999999999997 443322221212223456789999997799999 89999999999999
Q ss_pred HHc
Q 026418 219 QEK 221 (239)
Q Consensus 219 ~~~ 221 (239)
+++
T Consensus 313 ~~~ 315 (321)
T 1e6u_A 313 LEN 315 (321)
T ss_dssp HHT
T ss_pred HHH
Confidence 865
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-30 Score=211.32 Aligned_cols=210 Identities=14% Similarity=0.057 Sum_probs=165.0
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+++|+.++.+++++|++.++++|||+|| .++|+..... +++|+++ ..|.+.|+.+|..+|.+++.++++.
T Consensus 126 ~~~n~~~~~~l~~a~~~~~~~~~v~~SS-~~~~~~~~~~---~~~E~~~------~~~~~~Y~~sK~~~e~~~~~~~~~~ 195 (352)
T 1sb8_A 126 NATNIDGFLNMLIAARDAKVQSFTYAAS-SSTYGDHPGL---PKVEDTI------GKPLSPYAVTKYVNELYADVFSRCY 195 (352)
T ss_dssp HHHHTHHHHHHHHHHHHTTCSEEEEEEE-GGGGTTCCCS---SBCTTCC------CCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEecc-HHhcCCCCCC---CCCCCCC------CCCCChhHHHHHHHHHHHHHHHHHc
Confidence 4689999999999999999999999999 5999876544 7888876 3567899999999999999998888
Q ss_pred CccEEEEecCcccCCCCCCCC---ChhHHHHHHHHcCCCCc-cC--CCCCCceehHHHHHHHHHhhcCC-C-CCceEEEe
Q 026418 82 GVDLVVVNPVLVLGPLLQSTV---NASIIHILKYLNGSAKT-YA--NSVQAYVHVRDVALAHILVYETP-S-ASGRYLCA 153 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~-~~--~~~~~~i~v~D~a~~~~~~~~~~-~-~~~~y~~~ 153 (239)
+++++++||+.+|||...... .....++..+..+.++. ++ +..++|+|++|+|++++.++... . .+++||++
T Consensus 196 g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~ 275 (352)
T 1sb8_A 196 GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLDARNQVYNIA 275 (352)
T ss_dssp CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGGGCSEEEEES
T ss_pred CCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhccccCCCceEEeC
Confidence 999999999999999865431 22334566677777654 34 45678999999999999988763 2 34499887
Q ss_pred -cCCCCHHHHHHHHHHhCC--CCCCCCC--CCCCCCCCCCCcccChHHHHh-hCCce-eCHHHHHHHHHHHHHHc
Q 026418 154 -ESVLHRGEVVEILAKFFP--EYPIPTK--CSDEKNPRKKPYKFSNQKLKD-LGLEF-TPVKQCLYETVKSLQEK 221 (239)
Q Consensus 154 -~~~~s~~el~~~i~~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~k~~~-lg~~p-~~~~e~i~~~~~~~~~~ 221 (239)
++++|+.|+++.+.+.++ +.+.+.. ..+..........+|++|+++ |||+| ++++++|+++++|++++
T Consensus 276 ~~~~~s~~e~~~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~ 350 (352)
T 1sb8_A 276 VGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFREGDVRHSLADISKAAKLLGYAPKYDVSAGVALAMPWYIMF 350 (352)
T ss_dssp CSCCEEHHHHHHHHHHHHHHTTCCCCCCCEEECCCTTCCSBCCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHHH
T ss_pred CCCCccHHHHHHHHHHHHHhcCCCCCCCceecCCCccchhhccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence 789999999999999862 3332211 111122334567889999976 99999 89999999999999753
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.9e-31 Score=211.23 Aligned_cols=207 Identities=20% Similarity=0.198 Sum_probs=161.4
Q ss_pred chhHhHHHHHHHHHHHhc-CCCEEEEccchhhhccCC--CCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA-KVRRVVFTSSIGAVYMDP--NRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA 78 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~-~v~~~i~~Ss~~~vy~~~--~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~ 78 (239)
+++|+.++.+++++|++. ++++|||+||. ++|+.. ... +++|+++. .|.+.|+.+|.++|.+++.++
T Consensus 98 ~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~-~v~g~~~~~~~---~~~E~~~~------~~~~~Y~~sK~~~E~~~~~~~ 167 (321)
T 2pk3_A 98 FSTNVFGTLHVLDAVRDSNLDCRILTIGSS-EEYGMILPEES---PVSEENQL------RPMSPYGVSKASVGMLARQYV 167 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCEEEEEEEG-GGTBSCCGGGC---SBCTTSCC------BCCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEEEccH-HhcCCCCCCCC---CCCCCCCC------CCCCccHHHHHHHHHHHHHHH
Confidence 578999999999999886 58999999995 999865 333 78888763 567899999999999999998
Q ss_pred HHcCccEEEEecCcccCCCCCCCCChhHHHHHHHHc---C--CCC-ccC--CCCCCceehHHHHHHHHHhhcCCCCCceE
Q 026418 79 VARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLN---G--SAK-TYA--NSVQAYVHVRDVALAHILVYETPSASGRY 150 (239)
Q Consensus 79 ~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~---~--~~~-~~~--~~~~~~i~v~D~a~~~~~~~~~~~~~~~y 150 (239)
++.|++++++||+++|||+.... .....++..+.. | ... .++ +..++++|++|+|++++.++..+..+++|
T Consensus 168 ~~~gi~~~ilrp~~v~g~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~g~~~ 246 (321)
T 2pk3_A 168 KAYGMDIIHTRTFNHIGPGQSLG-FVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQYGKTGDVY 246 (321)
T ss_dssp HHHCCEEEEEEECEEECTTCCTT-SHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHHHHHHHHCCTTCEE
T ss_pred HHcCCCEEEEEeCcccCcCCCCC-chHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHHHHHHhCCCCCCeE
Confidence 88899999999999999986542 222334455555 6 333 233 34678999999999999999866445599
Q ss_pred EEe-cCCCCHHHHHHHHHHhCCCCCCCCCCCC--CCCCCCCCcccChHHHHh-hCCce-eCHHHHHHHHHHHHHH
Q 026418 151 LCA-ESVLHRGEVVEILAKFFPEYPIPTKCSD--EKNPRKKPYKFSNQKLKD-LGLEF-TPVKQCLYETVKSLQE 220 (239)
Q Consensus 151 ~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~k~~~-lg~~p-~~~~e~i~~~~~~~~~ 220 (239)
|++ +.++|+.|+++.+.+.+ +.+.+....+ ..........+|++|+++ |||+| ++++++|+++++|+++
T Consensus 247 ~i~~~~~~s~~e~~~~i~~~~-g~~~~~~~~p~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~ 320 (321)
T 2pk3_A 247 NVCSGIGTRIQDVLDLLLAMA-NVKIDTELNPLQLRPSEVPTLIGSNKRLKDSTGWKPRIPLEKSLFEILQSYRQ 320 (321)
T ss_dssp EESCSCEEEHHHHHHHHHHHS-SSCCEEEECGGGCCSSCCSBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHT
T ss_pred EeCCCCCeeHHHHHHHHHHHh-CCCCceeeccccCCCcccchhccCHHHHHHHcCCCcCCCHHHHHHHHHHHHhc
Confidence 887 67899999999999997 4333222111 122234668899999977 89999 6999999999999975
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=8.2e-31 Score=212.20 Aligned_cols=208 Identities=22% Similarity=0.259 Sum_probs=163.8
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+++|+.++.+++++|.+.++++|||+|| .++||..... +++|+++ ..|.+.|+.+|..+|.+++.++++.
T Consensus 100 ~~~Nv~~~~~l~~a~~~~~~~~~v~~SS-~~vyg~~~~~---~~~E~~~------~~~~~~Y~~sK~~~e~~~~~~~~~~ 169 (337)
T 1r6d_A 100 TETNVQGTQTLLQCAVDAGVGRVVHVST-NQVYGSIDSG---SWTESSP------LEPNSPYAASKAGSDLVARAYHRTY 169 (337)
T ss_dssp HHHHTHHHHHHHHHHHHTTCCEEEEEEE-GGGGCCCSSS---CBCTTSC------CCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEecc-hHHhCCCCCC---CCCCCCC------CCCCCchHHHHHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999 5999876443 7788765 3567899999999999999998888
Q ss_pred CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCc-cC--CCCCCceehHHHHHHHHHhhcCCCCCceEEEe-cCCC
Q 026418 82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKT-YA--NSVQAYVHVRDVALAHILVYETPSASGRYLCA-ESVL 157 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~ 157 (239)
+++++++||+.+|||..... .....++..+..+.... ++ +..++|+|++|+|++++.++.+...+++||++ +.++
T Consensus 170 g~~~~ilrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~g~~~~v~~~~~~ 248 (337)
T 1r6d_A 170 GLDVRITRCCNNYGPYQHPE-KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGRAGEIYHIGGGLEL 248 (337)
T ss_dssp CCCEEEEEECEEECTTCCTT-SHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCCTTCEEEECCCCEE
T ss_pred CCCEEEEEeeeeECCCCCCC-ChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhCCCCCCEEEeCCCCCc
Confidence 99999999999999986432 23344566677776544 34 34578999999999999999765544599887 6789
Q ss_pred CHHHHHHHHHHhCCCCCCC-CCCCCCCCCCCCCcccChHHHHh-hCCce-eCHHHHHHHHHHHHHHc
Q 026418 158 HRGEVVEILAKFFPEYPIP-TKCSDEKNPRKKPYKFSNQKLKD-LGLEF-TPVKQCLYETVKSLQEK 221 (239)
Q Consensus 158 s~~el~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~k~~~-lg~~p-~~~~e~i~~~~~~~~~~ 221 (239)
|+.|+++.+.+.+ +.+.+ .............+.+|++|+++ |||+| ++++++|+++++|++++
T Consensus 249 s~~e~~~~i~~~~-g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~ 314 (337)
T 1r6d_A 249 TNRELTGILLDSL-GADWSSVRKVADRKGHDLRYSLDGGKIERELGYRPQVSFADGLARTVRWYREN 314 (337)
T ss_dssp EHHHHHHHHHHHH-TCCGGGEEEECCCTTCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHh-CCCcccceecCCCCCCcceeecCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhc
Confidence 9999999999987 43322 11111111223456789999976 99999 89999999999999875
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-30 Score=214.59 Aligned_cols=211 Identities=15% Similarity=0.101 Sum_probs=157.3
Q ss_pred chhHhHHHHHHHHHHHhc-CCCEEEEccchhhhccCCCCCCCcccc--CCCCCChhhcc-cCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA-KVRRVVFTSSIGAVYMDPNRSPDDVVD--ESCWSDLEFCK-NTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~-~v~~~i~~Ss~~~vy~~~~~~~~~~~~--E~~~~~~~~~~-~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.+|+++|++. ++++|||+|| .++|+..... +++ |+++..+ . .|.+.|+.+|..+|.+++.+
T Consensus 123 ~~~nv~~~~~ll~a~~~~~~~~~~V~~SS-~~vyg~~~~~---~~~~~E~~~~~~---~~~~~~~Y~~sK~~~E~~~~~~ 195 (377)
T 2q1s_A 123 HENNTLTTLKLYERLKHFKRLKKVVYSAA-GCSIAEKTFD---DAKATEETDIVS---LHNNDSPYSMSKIFGEFYSVYY 195 (377)
T ss_dssp HHHHTHHHHHHHHHHTTCSSCCEEEEEEE-C-----------------CCCCCCC---SSCCCSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEEeCC-HHHcCCCCCC---CcCccccccccc---ccCCCCchHHHHHHHHHHHHHH
Confidence 568999999999999999 8999999999 5999876543 677 7762101 2 45788999999999999999
Q ss_pred HHHcCccEEEEecCcccCCCC---------CCC---CChhHHHHHHHHcCCCCc-cC--CCCCCceehHHHHHH-HHHhh
Q 026418 78 AVARGVDLVVVNPVLVLGPLL---------QST---VNASIIHILKYLNGSAKT-YA--NSVQAYVHVRDVALA-HILVY 141 (239)
Q Consensus 78 ~~~~~~~~~i~Rp~~v~G~~~---------~~~---~~~~~~~~~~~~~~~~~~-~~--~~~~~~i~v~D~a~~-~~~~~ 141 (239)
+++.+++++++||+.+||+.. ... ......++..+..+.++. ++ +..++|+|++|+|++ ++.++
T Consensus 196 ~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~i~~~~ 275 (377)
T 2q1s_A 196 HKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVEDVANGLIACAA 275 (377)
T ss_dssp HHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEHHHHHHHHHHHHH
T ss_pred HHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHH
Confidence 888899999999999999976 210 233445667777777654 33 467899999999999 99999
Q ss_pred cCCCCCceEEEe-cCCCCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCC-CcccChHHHHh-hCCce-eCHHHHHHHHHHH
Q 026418 142 ETPSASGRYLCA-ESVLHRGEVVEILAKFFPEYPIPTKCSDEKNPRKK-PYKFSNQKLKD-LGLEF-TPVKQCLYETVKS 217 (239)
Q Consensus 142 ~~~~~~~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~k~~~-lg~~p-~~~~e~i~~~~~~ 217 (239)
.++. .|+||++ ++++|+.|+++.+.+.+ +.+.+....+....... ...+|++|+++ |||+| ++++++|+++++|
T Consensus 276 ~~~~-~g~~~i~~~~~~s~~e~~~~i~~~~-g~~~~~~~~p~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~ 353 (377)
T 2q1s_A 276 DGTP-GGVYNIASGKETSIADLATKINEIT-GNNTELDRLPKRPWDNSGKRFGSPEKARRELGFSADVSIDDGLRKTIEW 353 (377)
T ss_dssp HCCT-TEEEECCCCCCEEHHHHHHHHHHHH-TCCSCCCCCCCCGGGCC-CCCCCCHHHHHHHCCCCCCCHHHHHHHHHHH
T ss_pred hcCC-CCeEEecCCCceeHHHHHHHHHHHh-CCCCCceeCCCCccccccccccCHHHHHHHcCCCCCCCHHHHHHHHHHH
Confidence 8765 3499887 68999999999999997 44433333332222334 68899999965 99999 8999999999999
Q ss_pred HHHc
Q 026418 218 LQEK 221 (239)
Q Consensus 218 ~~~~ 221 (239)
++++
T Consensus 354 ~~~~ 357 (377)
T 2q1s_A 354 TKAN 357 (377)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 9764
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.8e-30 Score=208.93 Aligned_cols=208 Identities=16% Similarity=0.144 Sum_probs=162.8
Q ss_pred chhHhHHHHHHHHHHHhcCC-CEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKV-RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA 80 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v-~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 80 (239)
+++|+.++.+++++|.+.+. ++|||+|| .++||..... +++|+++ ..|.+.|+.+|..+|.+++.++++
T Consensus 99 ~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS-~~vyg~~~~~---~~~E~~~------~~~~~~Y~~sK~~~e~~~~~~~~~ 168 (336)
T 2hun_A 99 LHSNVIGTYTLLESIRRENPEVRFVHVST-DEVYGDILKG---SFTENDR------LMPSSPYSATKAASDMLVLGWTRT 168 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTSEEEEEEE-GGGGCCCSSS---CBCTTBC------CCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCcEEEEecc-HHHHCCCCCC---CcCCCCC------CCCCCccHHHHHHHHHHHHHHHHH
Confidence 57899999999999999874 79999999 5999876443 7888765 346789999999999999999888
Q ss_pred cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCc-cC--CCCCCceehHHHHHHHHHhhcCCCCCceEEEe-cCC
Q 026418 81 RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKT-YA--NSVQAYVHVRDVALAHILVYETPSASGRYLCA-ESV 156 (239)
Q Consensus 81 ~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~ 156 (239)
.+++++++||+.+|||..... .....++..+..+.... ++ +..++++|++|+|++++.++.....+++||++ +.+
T Consensus 169 ~~~~~~ilrp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~g~~~~v~~~~~ 247 (336)
T 2hun_A 169 YNLNASITRCTNNYGPYQFPE-KLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKGESREIYNISAGEE 247 (336)
T ss_dssp TTCEEEEEEECEEESTTCCTT-SHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHHHHCCTTCEEEECCSCE
T ss_pred hCCCEEEEeeeeeeCcCCCcC-chHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHhCCCCCCEEEeCCCCc
Confidence 899999999999999986432 23344566777776544 34 35678999999999999999765544599887 678
Q ss_pred CCHHHHHHHHHHhCCCCCCC-CCCCCCCCCCCCCcccChHHHHh-hCCce-eCHHHHHHHHHHHHHHc
Q 026418 157 LHRGEVVEILAKFFPEYPIP-TKCSDEKNPRKKPYKFSNQKLKD-LGLEF-TPVKQCLYETVKSLQEK 221 (239)
Q Consensus 157 ~s~~el~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~k~~~-lg~~p-~~~~e~i~~~~~~~~~~ 221 (239)
+|+.|+++.+.+.+ +.+.+ ....+..........+|++|+++ |||+| ++++++|+++++|++++
T Consensus 248 ~s~~e~~~~i~~~~-g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~ 314 (336)
T 2hun_A 248 KTNLEVVKIILRLM-GKGEELIELVEDRPGHDLRYSLDSWKITRDLKWRPKYTFDEGIKKTIDWYLKN 314 (336)
T ss_dssp ECHHHHHHHHHHHT-TCCSTTEEEECCCTTCCCCCCBCCHHHHHHHCCCCSSCHHHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHh-CCCcccccccCCCCCchhhhcCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhC
Confidence 99999999999997 44322 11111122223456789999976 99999 89999999999999875
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-30 Score=210.21 Aligned_cols=220 Identities=18% Similarity=0.202 Sum_probs=164.4
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhc-ccCCchHHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFC-KNTKNWYCYGKAVAEKAAWEEAVA 80 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~-~~~~~~Y~~sK~~~E~~~~~~~~~ 80 (239)
+++|+.++.+++++|++.+ ++|||+|| .++|+..... +++|+++.....+ ..|.+.|+.+|..+|.+++.++++
T Consensus 91 ~~~n~~~~~~l~~~~~~~~-~~~v~~SS-~~v~g~~~~~---~~~e~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~ 165 (345)
T 2bll_A 91 FELDFEENLRIIRYCVKYR-KRIIFPST-SEVYGMCSDK---YFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEK 165 (345)
T ss_dssp HHHHTHHHHHHHHHHHHTT-CEEEEECC-GGGGBTCCCS---SBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhC-CeEEEEec-HHHcCCCCCC---CcCCcccccccCcccCcccccHHHHHHHHHHHHHHHHh
Confidence 5689999999999999998 89999999 5999876544 6788875422111 134568999999999999999888
Q ss_pred cCccEEEEecCcccCCCCCCC-------CChhHHHHHHHHcCCCCc-c--CCCCCCceehHHHHHHHHHhhcCCC--C-C
Q 026418 81 RGVDLVVVNPVLVLGPLLQST-------VNASIIHILKYLNGSAKT-Y--ANSVQAYVHVRDVALAHILVYETPS--A-S 147 (239)
Q Consensus 81 ~~~~~~i~Rp~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~-~--~~~~~~~i~v~D~a~~~~~~~~~~~--~-~ 147 (239)
.+++++++||+.+|||+.... ......++..+..+..+. + ++..++|+|++|+|++++.++.++. . +
T Consensus 166 ~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~g 245 (345)
T 2bll_A 166 EGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDG 245 (345)
T ss_dssp HCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGGTTTT
T ss_pred cCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHHHHHHHhhccccCCC
Confidence 899999999999999986421 122345566777777654 3 3456789999999999999998653 2 3
Q ss_pred ceEEEec-C-CCCHHHHHHHHHHhCCCCC----CCCCCC----------CCCCCCCCCcccChHHHHh-hCCce-eCHHH
Q 026418 148 GRYLCAE-S-VLHRGEVVEILAKFFPEYP----IPTKCS----------DEKNPRKKPYKFSNQKLKD-LGLEF-TPVKQ 209 (239)
Q Consensus 148 ~~y~~~~-~-~~s~~el~~~i~~~~~~~~----~~~~~~----------~~~~~~~~~~~~~~~k~~~-lg~~p-~~~~e 209 (239)
++||+++ + ++|+.|+++.+.+.++... +|.... ...........+|++|+++ |||+| +++++
T Consensus 246 ~~~~i~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~ 325 (345)
T 2bll_A 246 EIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQE 325 (345)
T ss_dssp EEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC------------CCCCCBCCHHHHHHHCCCCCCCHHH
T ss_pred ceEEeCCCCCCCCHHHHHHHHHHHhCCCcccccCccccccccccchhhccccccchhhhcccHHHHHHhcCCCccccHHH
Confidence 4898884 4 7999999999999863221 111110 0001123467789999976 99999 89999
Q ss_pred HHHHHHHHHHHcCCCCC
Q 026418 210 CLYETVKSLQEKGHLPI 226 (239)
Q Consensus 210 ~i~~~~~~~~~~g~~~~ 226 (239)
+|+++++|++++..+..
T Consensus 326 ~l~~~~~~~~~~~~~~~ 342 (345)
T 2bll_A 326 TIDETLDFFLRTVDLTD 342 (345)
T ss_dssp HHHHHHHHHHHHSCTTC
T ss_pred HHHHHHHHHHHcCCCCC
Confidence 99999999987765443
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-30 Score=209.70 Aligned_cols=212 Identities=21% Similarity=0.276 Sum_probs=164.7
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+++|+.++.+++++|++.++ +|||+|| .++|+..... +++|+.+.... +..|.+.|+.+|..+|.+++.++++.
T Consensus 115 ~~~n~~~~~~l~~a~~~~~~-~~v~~SS-~~v~g~~~~~---~~~E~~~~~~~-~~~~~~~Y~~sK~~~E~~~~~~~~~~ 188 (343)
T 2b69_A 115 LKTNTIGTLNMLGLAKRVGA-RLLLAST-SEVYGDPEVH---PQSEDYWGHVN-PIGPRACYDEGKRVAETMCYAYMKQE 188 (343)
T ss_dssp HHHHHHHHHHHHHHHHHHTC-EEEEEEE-GGGGBSCSSS---SBCTTCCCBCC-SSSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCC-cEEEECc-HHHhCCCCCC---CCcccccccCC-CCCCCCchHHHHHHHHHHHHHHHHHh
Confidence 57899999999999999986 8999999 5999876544 67887543211 13457789999999999999998888
Q ss_pred CccEEEEecCcccCCCCCCC-CChhHHHHHHHHcCCCCc-cC--CCCCCceehHHHHHHHHHhhcCCCCCceEEEe-cCC
Q 026418 82 GVDLVVVNPVLVLGPLLQST-VNASIIHILKYLNGSAKT-YA--NSVQAYVHVRDVALAHILVYETPSASGRYLCA-ESV 156 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~-~~--~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~ 156 (239)
+++++++||+.+|||..... ......++..+..+..+. ++ +..++|+|++|+|++++.++..+. +++||++ +++
T Consensus 189 ~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~-~~~~~i~~~~~ 267 (343)
T 2b69_A 189 GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNV-SSPVNLGNPEE 267 (343)
T ss_dssp CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSSC-CSCEEESCCCE
T ss_pred CCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHHhcCC-CCeEEecCCCC
Confidence 99999999999999976432 223345566777777654 44 456789999999999999987543 4689887 688
Q ss_pred CCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcccChHHHHh-hCCce-eCHHHHHHHHHHHHHHc
Q 026418 157 LHRGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKD-LGLEF-TPVKQCLYETVKSLQEK 221 (239)
Q Consensus 157 ~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p-~~~~e~i~~~~~~~~~~ 221 (239)
+|+.|+++.+.+.+ +.+.+....+..........+|++|+++ |||+| ++++++|+++++|++++
T Consensus 268 ~s~~e~~~~i~~~~-g~~~~~~~~p~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 333 (343)
T 2b69_A 268 HTILEFAQLIKNLV-GSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKE 333 (343)
T ss_dssp EEHHHHHHHHHHHH-TCCCCEEEECCCTTCCCCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHh-CCCCCceeCCCCCCCCceecCCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHH
Confidence 99999999999997 4433322222222234567889999976 99999 89999999999999865
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-30 Score=209.00 Aligned_cols=208 Identities=11% Similarity=0.015 Sum_probs=162.9
Q ss_pred chhHhHHHHHHHHHHHhcCC-CEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKV-RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA 80 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v-~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 80 (239)
+++|+.++.+++++|++.++ ++|||+|| .++|+..... +++|+++. .|.+.|+.+|..+|.+++.++++
T Consensus 110 ~~~n~~~~~~l~~a~~~~~~~~~~v~~SS-~~v~g~~~~~---~~~E~~~~------~p~~~Y~~sK~~~e~~~~~~~~~ 179 (335)
T 1rpn_A 110 GVVDGLGVTHLLEAIRQFSPETRFYQAST-SEMFGLIQAE---RQDENTPF------YPRSPYGVAKLYGHWITVNYRES 179 (335)
T ss_dssp HHHHTHHHHHHHHHHHHHCTTSEEEEEEE-GGGGCSCSSS---SBCTTSCC------CCCSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEEEeC-HHHhCCCCCC---CCCcccCC------CCCChhHHHHHHHHHHHHHHHHH
Confidence 57899999999999999986 89999999 5999876554 78888763 56789999999999999999888
Q ss_pred cCccEEEEecCcccCCCCCCCCC--hhHHHHHHHHcCCCCc--cC--CCCCCceehHHHHHHHHHhhcCCCCCceEEEe-
Q 026418 81 RGVDLVVVNPVLVLGPLLQSTVN--ASIIHILKYLNGSAKT--YA--NSVQAYVHVRDVALAHILVYETPSASGRYLCA- 153 (239)
Q Consensus 81 ~~~~~~i~Rp~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~--~~--~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~- 153 (239)
.+++++++||+++|||+...... ....++..+..|..+. ++ +..++|+|++|+|++++.++.++. .++||++
T Consensus 180 ~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~-~~~~ni~~ 258 (335)
T 1rpn_A 180 FGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK-ADDYVVAT 258 (335)
T ss_dssp HCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSS-CCCEEECC
T ss_pred cCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHHHHhcCC-CCEEEEeC
Confidence 89999999999999997643321 1233455666776432 34 456789999999999999998764 3699887
Q ss_pred cCCCCHHHHHHHHHHhCCCCCCC----CCCCCCCCCCCCCcccChHHHHh-hCCce-eCHHHHHHHHHHHHHHc
Q 026418 154 ESVLHRGEVVEILAKFFPEYPIP----TKCSDEKNPRKKPYKFSNQKLKD-LGLEF-TPVKQCLYETVKSLQEK 221 (239)
Q Consensus 154 ~~~~s~~el~~~i~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~k~~~-lg~~p-~~~~e~i~~~~~~~~~~ 221 (239)
++++|+.|+++.+.+.+ +.+.+ ...............+|++|+++ |||+| ++++++|+++++|+++.
T Consensus 259 ~~~~s~~e~~~~i~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 331 (335)
T 1rpn_A 259 GVTTTVRDMCQIAFEHV-GLDYRDFLKIDPAFFRPAEVDVLLGNPAKAQRVLGWKPRTSLDELIRMMVEADLRR 331 (335)
T ss_dssp SCEEEHHHHHHHHHHTT-TCCGGGTEEECGGGCCSSCCCBCCBCTHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred CCCccHHHHHHHHHHHh-CCCccccccccccccCCCcchhhcCCHHHHHHhcCCCcCCCHHHHHHHHHHHHHHh
Confidence 67899999999999997 33211 11111122234567789999976 99999 79999999999999764
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-30 Score=211.46 Aligned_cols=211 Identities=15% Similarity=0.057 Sum_probs=163.1
Q ss_pred chhHhHHHHHHHHHHHhcC-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA 80 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 80 (239)
+++|+.++.+++++|.+.+ +++|||+|| .++|+..... .+++|+++ ..|.+.|+.+|..+|.+++.++.+
T Consensus 104 ~~~n~~~~~~l~~a~~~~~~~~~~v~~SS-~~vyg~~~~~--~~~~E~~~------~~~~~~Y~~sK~~~e~~~~~~~~~ 174 (357)
T 1rkx_A 104 YSTNVMGTVYLLEAIRHVGGVKAVVNITS-DKCYDNKEWI--WGYRENEA------MGGYDPYSNSKGCAELVTSSYRNS 174 (357)
T ss_dssp HHHHTHHHHHHHHHHHHHCCCCEEEEECC-GGGBCCCCSS--SCBCTTSC------BCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEEecC-HHHhCCCCcC--CCCCCCCC------CCCCCccHHHHHHHHHHHHHHHHH
Confidence 5689999999999999987 899999999 5999865431 25677755 356789999999999999998765
Q ss_pred c---------CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCcc--CCCCCCceehHHHHHHHHHhhcC----C-
Q 026418 81 R---------GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY--ANSVQAYVHVRDVALAHILVYET----P- 144 (239)
Q Consensus 81 ~---------~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~D~a~~~~~~~~~----~- 144 (239)
. +++++++||+.+|||+..........++..+.++..+.+ ++..++|+|++|+|++++.++.+ +
T Consensus 175 ~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~ 254 (357)
T 1rkx_A 175 FFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGYLLLAQKLYTDGA 254 (357)
T ss_dssp HSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHHHHHHHHHHHHHHTCG
T ss_pred HhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEECCCCCeeccEeHHHHHHHHHHHHHhhhhcCC
Confidence 4 899999999999999764333444556677777877654 34567899999999999998864 1
Q ss_pred CCCceEEEec---CCCCHHHHHHHHHHhCCCCCCCCCCCCC-CCCCCCCcccChHHHHh-hCCce-eCHHHHHHHHHHHH
Q 026418 145 SASGRYLCAE---SVLHRGEVVEILAKFFPEYPIPTKCSDE-KNPRKKPYKFSNQKLKD-LGLEF-TPVKQCLYETVKSL 218 (239)
Q Consensus 145 ~~~~~y~~~~---~~~s~~el~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~k~~~-lg~~p-~~~~e~i~~~~~~~ 218 (239)
..+++||+++ +++|+.|+++.+.+.+ +.+.+....+. .........+|++|+++ |||+| ++++++|+++++|+
T Consensus 255 ~~~~~~ni~~~~~~~~s~~e~~~~i~~~~-g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~ 333 (357)
T 1rkx_A 255 EYAEGWNFGPNDADATPVKNIVEQMVKYW-GEGASWQLDGNAHPHEAHYLKLDCSKAKMQLGWHPRWNLNTTLEYIVGWH 333 (357)
T ss_dssp GGCSEEECCCCGGGCEEHHHHHHHHHHHH-CTTCCEEC-------CCCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHH
T ss_pred CCCceEEECCCCCCcccHHHHHHHHHHHh-CCCCccccCCCCCCcCcccccCCHHHHHHHhCCCcCCcHHHHHHHHHHHH
Confidence 2345999873 5899999999999987 43333222211 12234567899999976 99999 89999999999999
Q ss_pred HHcC
Q 026418 219 QEKG 222 (239)
Q Consensus 219 ~~~g 222 (239)
+++.
T Consensus 334 ~~~~ 337 (357)
T 1rkx_A 334 KNWL 337 (357)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8654
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.9e-30 Score=209.07 Aligned_cols=208 Identities=18% Similarity=0.160 Sum_probs=159.0
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccC-CchHHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNT-KNWYCYGKAVAEKAAWEEAVA 80 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~-~~~Y~~sK~~~E~~~~~~~~~ 80 (239)
+++|+.++.+++++|++.++++|||+|| .++|+..... +++|+++. .| .+.|+.+|..+|.+++.++++
T Consensus 105 ~~~n~~~~~~l~~~~~~~~~~~iv~~SS-~~~~g~~~~~---~~~E~~~~------~p~~~~Y~~sK~~~e~~~~~~~~~ 174 (348)
T 1ek6_A 105 YRVNLTGTIQLLEIMKAHGVKNLVFSSS-ATVYGNPQYL---PLDEAHPT------GGCTNPYGKSKFFIEEMIRDLCQA 174 (348)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEEEE-GGGGCSCSSS---SBCTTSCC------CCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEECc-HHHhCCCCCC---CcCCCCCC------CCCCCchHHHHHHHHHHHHHHHhc
Confidence 5789999999999999999999999999 5999876544 78888763 34 688999999999999999876
Q ss_pred cC--ccEEEEecCcccCCCCC------CC---CChhHHHHHHHH-cCCCCc-c--------CCCCCCceehHHHHHHHHH
Q 026418 81 RG--VDLVVVNPVLVLGPLLQ------ST---VNASIIHILKYL-NGSAKT-Y--------ANSVQAYVHVRDVALAHIL 139 (239)
Q Consensus 81 ~~--~~~~i~Rp~~v~G~~~~------~~---~~~~~~~~~~~~-~~~~~~-~--------~~~~~~~i~v~D~a~~~~~ 139 (239)
+ ++++++||+++|||... .. ......++..+. .+..+. + ++..++|+|++|+|++++.
T Consensus 175 -~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~ 253 (348)
T 1ek6_A 175 -DKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIA 253 (348)
T ss_dssp -CTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHH
T ss_pred -CCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCceEEeeEEHHHHHHHHHH
Confidence 5 99999999999998531 11 112222333333 333322 2 2456789999999999999
Q ss_pred hhcCC--CCC-ceEEEe-cCCCCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcccChHHHHh-hCCce-eCHHHHHHH
Q 026418 140 VYETP--SAS-GRYLCA-ESVLHRGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKD-LGLEF-TPVKQCLYE 213 (239)
Q Consensus 140 ~~~~~--~~~-~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p-~~~~e~i~~ 213 (239)
++.++ ..+ ++||++ ++++|+.|+++.+.+.+ +.+++....+..........+|++|+++ |||+| ++++++|++
T Consensus 254 ~~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~-g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~l~~ 332 (348)
T 1ek6_A 254 ALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKAS-GKKIPYKVVARREGDVAACYANPSLAQEELGWTAALGLDRMCED 332 (348)
T ss_dssp HHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHH-CSCCCEEEECCCTTCCSEECBCCHHHHHTTCCCCCCCHHHHHHH
T ss_pred HHhcccccCCceEEEeCCCCCccHHHHHHHHHHHh-CCCCceeeCCCCCccchhhccCHHHHHHhcCCCCCCCHHHHHHH
Confidence 98764 233 499887 78899999999999997 5444433323223334567899999966 99999 899999999
Q ss_pred HHHHHHHc
Q 026418 214 TVKSLQEK 221 (239)
Q Consensus 214 ~~~~~~~~ 221 (239)
+++|++++
T Consensus 333 ~~~w~~~~ 340 (348)
T 1ek6_A 333 LWRWQKQN 340 (348)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhc
Confidence 99999875
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.4e-31 Score=218.08 Aligned_cols=213 Identities=13% Similarity=0.130 Sum_probs=163.1
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhc-ccCCchHHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFC-KNTKNWYCYGKAVAEKAAWEEAVA 80 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~-~~~~~~Y~~sK~~~E~~~~~~~~~ 80 (239)
+++|+.++.+|+++|++.+ ++|||+|| .++|+..... +++|+++.....+ ..|.+.|+.+|.++|++++.++++
T Consensus 115 ~~~nv~~~~~ll~a~~~~~-~~~v~~SS-~~vyg~~~~~---~~~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~ 189 (372)
T 3slg_A 115 FELDFEANLPIVRSAVKYG-KHLVFPST-SEVYGMCADE---QFDPDASALTYGPINKPRWIYACSKQLMDRVIWGYGME 189 (372)
T ss_dssp HHHHTTTTHHHHHHHHHHT-CEEEEECC-GGGGBSCCCS---SBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHhC-CcEEEeCc-HHHhCCCCCC---CCCccccccccCCCCCCCCcHHHHHHHHHHHHHHHHHC
Confidence 4789999999999999999 99999999 5999886654 6777765422111 146678999999999999999877
Q ss_pred cCccEEEEecCcccCCCCCCC-------CChhHHHHHHHHcCCCCc-c--CCCCCCceehHHHHHHHHHhhcCCC---CC
Q 026418 81 RGVDLVVVNPVLVLGPLLQST-------VNASIIHILKYLNGSAKT-Y--ANSVQAYVHVRDVALAHILVYETPS---AS 147 (239)
Q Consensus 81 ~~~~~~i~Rp~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~-~--~~~~~~~i~v~D~a~~~~~~~~~~~---~~ 147 (239)
+++++++||+++|||+.... ......++..+.++..+. + ++..++|+|++|+|++++.++.++. .+
T Consensus 190 -g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~ 268 (372)
T 3slg_A 190 -GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISALMKIIENSNGVATG 268 (372)
T ss_dssp -TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTT
T ss_pred -CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHHHHHHhcccCcCCC
Confidence 99999999999999986531 223445667777887755 3 3567789999999999999998764 34
Q ss_pred ceEEEec--CCCCHHHHHHHHHHhCCCCCCCCCC---------------CCCCCCCCCCcccChHHHHh-hCCce-eCHH
Q 026418 148 GRYLCAE--SVLHRGEVVEILAKFFPEYPIPTKC---------------SDEKNPRKKPYKFSNQKLKD-LGLEF-TPVK 208 (239)
Q Consensus 148 ~~y~~~~--~~~s~~el~~~i~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~k~~~-lg~~p-~~~~ 208 (239)
++||+++ +.+|+.|+++.+.+.+ +.+.+... ............+|++|+++ |||+| ++++
T Consensus 269 ~~~ni~~~~~~~s~~e~~~~i~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~ 347 (372)
T 3slg_A 269 KIYNIGNPNNNFSVRELANKMLELA-AEFPEYADSAKRVKLVETTSGAYYGNGYQDVQNRVPKIENTMQELGWAPQFTFD 347 (372)
T ss_dssp EEEEECCTTCEEEHHHHHHHHHHHH-HHCTTTHHHHHTCCEEEC-------------CCCCBCCHHHHHHHTCCCCCCHH
T ss_pred ceEEeCCCCCCccHHHHHHHHHHHh-CCCcccccccccceeeeccccccccCCccccceeecCHHHHHHHcCCCCCCCHH
Confidence 4998875 5899999999999987 32222110 00011244567889999976 99999 8999
Q ss_pred HHHHHHHHHHHHc
Q 026418 209 QCLYETVKSLQEK 221 (239)
Q Consensus 209 e~i~~~~~~~~~~ 221 (239)
++|+++++|++++
T Consensus 348 e~l~~~~~~~~~~ 360 (372)
T 3slg_A 348 DALRQIFEAYRGH 360 (372)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999643
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.1e-31 Score=215.00 Aligned_cols=203 Identities=14% Similarity=0.114 Sum_probs=162.2
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+++|+.++.+++++|++.+++ |||+|| .++||.... +++|+++ ..|.+.|+.+|.++|.+++.++.+
T Consensus 112 ~~~Nv~gt~~ll~aa~~~~~~-~V~~SS-~~vyg~~~~----~~~E~~~------~~p~~~Y~~sK~~~E~~~~~~~~~- 178 (362)
T 3sxp_A 112 MKTNYQAFLNLLEIARSKKAK-VIYASS-AGVYGNTKA----PNVVGKN------ESPENVYGFSKLCMDEFVLSHSND- 178 (362)
T ss_dssp HHHHTHHHHHHHHHHHHTTCE-EEEEEE-GGGGCSCCS----SBCTTSC------CCCSSHHHHHHHHHHHHHHHTTTT-
T ss_pred HHHHHHHHHHHHHHHHHcCCc-EEEeCc-HHHhCCCCC----CCCCCCC------CCCCChhHHHHHHHHHHHHHHhcc-
Confidence 578999999999999999986 999999 599987643 6888876 366899999999999999998754
Q ss_pred CccEEEEecCcccCCCCCCCC---ChhHHHHHHHHcCCCCcc-C--CCCCCceehHHHHHHHHHhhcCCCCCceEEEe-c
Q 026418 82 GVDLVVVNPVLVLGPLLQSTV---NASIIHILKYLNGSAKTY-A--NSVQAYVHVRDVALAHILVYETPSASGRYLCA-E 154 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~-~--~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~ 154 (239)
++++++||+++|||+..... .....++..+..+..+.. + +..++|+|++|+|++++.++..+.. |+||++ +
T Consensus 179 -~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~~~~~-g~~~i~~~ 256 (362)
T 3sxp_A 179 -NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMKAQKS-GVYNVGYS 256 (362)
T ss_dssp -SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHHHHTTCSSC-EEEEESCS
T ss_pred -CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHHHHHhcCCC-CEEEeCCC
Confidence 89999999999999865321 334456677777776543 3 4567899999999999999987654 499886 7
Q ss_pred CCCCHHHHHHHHHHhCCCCCCCCCCCCCC-CCCCCCcccChHHHHh-hCCce-eCHHHHHHHHHHHHHHc
Q 026418 155 SVLHRGEVVEILAKFFPEYPIPTKCSDEK-NPRKKPYKFSNQKLKD-LGLEF-TPVKQCLYETVKSLQEK 221 (239)
Q Consensus 155 ~~~s~~el~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~k~~~-lg~~p-~~~~e~i~~~~~~~~~~ 221 (239)
+++|+.|+++.+.+.++ +.+....+.. ........+|++|+++ |||+| ++++++|+++++|+++.
T Consensus 257 ~~~s~~e~~~~i~~~~g--~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 324 (362)
T 3sxp_A 257 QARSYNEIVSILKEHLG--DFKVTYIKNPYAFFQKHTQAHIEPTILDLDYTPLYDLESGIKDYLPHIHAI 324 (362)
T ss_dssp CEEEHHHHHHHHHHHHC--CCEEECCC-------CCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHTCC
T ss_pred CCccHHHHHHHHHHHcC--CCceEECCCCCcCcccceecCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHH
Confidence 88999999999999985 4443333322 3455678999999955 99999 79999999999999754
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-30 Score=205.26 Aligned_cols=190 Identities=18% Similarity=0.143 Sum_probs=154.1
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+++|+.++.+++++|++.++++|||+|| .++|+..... +++|+++. .|.+.|+.+|..+|++ +.+
T Consensus 82 ~~~n~~~~~~ll~a~~~~~~~~~v~~SS-~~vyg~~~~~---~~~E~~~~------~p~~~Y~~sK~~~E~~-~~~---- 146 (286)
T 3gpi_A 82 RLSYVEGLRNTLSALEGAPLQHVFFVSS-TGVYGQEVEE---WLDEDTPP------IAKDFSGKRMLEAEAL-LAA---- 146 (286)
T ss_dssp -CCSHHHHHHHHHHTTTSCCCEEEEEEE-GGGCCCCCSS---EECTTSCC------CCCSHHHHHHHHHHHH-GGG----
T ss_pred HHHHHHHHHHHHHHHhhCCCCEEEEEcc-cEEEcCCCCC---CCCCCCCC------CCCChhhHHHHHHHHH-Hhc----
Confidence 5689999999999999999999999999 5999877654 78998873 5678999999999998 543
Q ss_pred CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCC-ccCCCCCCceehHHHHHHHHHhhcCC---CCCceEEEe-cCC
Q 026418 82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAK-TYANSVQAYVHVRDVALAHILVYETP---SASGRYLCA-ESV 156 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~D~a~~~~~~~~~~---~~~~~y~~~-~~~ 156 (239)
++++++||+++||+... .++..+.+ ... ..++..++|+|++|+|++++.++.++ ..+++||++ +++
T Consensus 147 -~~~~ilR~~~v~G~~~~-------~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (286)
T 3gpi_A 147 -YSSTILRFSGIYGPGRL-------RMIRQAQT-PEQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTDNQP 217 (286)
T ss_dssp -SSEEEEEECEEEBTTBC-------HHHHHTTC-GGGSCSSBCEECEEEHHHHHHHHHHHHHHHTTSCCCSEEEECCSCC
T ss_pred -CCeEEEecccccCCCch-------hHHHHHHh-cccCCCcCceeEEEEHHHHHHHHHHHHhhhccCCCCceEEEeCCCC
Confidence 89999999999999753 23455555 222 12455678999999999999999873 445599888 688
Q ss_pred CCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcccChHHHHhhCCce-e-CHHHHHHHHHHHHH
Q 026418 157 LHRGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKDLGLEF-T-PVKQCLYETVKSLQ 219 (239)
Q Consensus 157 ~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~p-~-~~~e~i~~~~~~~~ 219 (239)
+|+.|+++.+.+.+ +.+.+....+ .......+|++|+++|||+| + +++++|+++++|+.
T Consensus 218 ~s~~e~~~~i~~~~-g~~~~~~~~~---~~~~~~~~d~~k~~~lG~~p~~~~l~e~l~~~~~~~~ 278 (286)
T 3gpi_A 218 LPVHDLLRWLADRQ-GIAYPAGATP---PVQGNKKLSNARLLASGYQLIYPDYVSGYGALLAAMR 278 (286)
T ss_dssp EEHHHHHHHHHHHT-TCCCCCSCCC---CBCSSCEECCHHHHHTTCCCSSCSHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHc-CCCCCCCCCc---ccCCCeEeeHHHHHHcCCCCcCCcHHHHHHHHHHHHh
Confidence 99999999999997 5554444333 34567889999999899999 6 79999999999985
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.9e-30 Score=207.25 Aligned_cols=210 Identities=20% Similarity=0.246 Sum_probs=162.3
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCC---------CCccccCCCCCChhhcccCCchHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRS---------PDDVVDESCWSDLEFCKNTKNWYCYGKAVAEK 72 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~---------~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~ 72 (239)
+++|+.++.+++++|.+.++ +|||+|| .++||..... ...+++|+++ ..|.+.|+.+|..+|.
T Consensus 99 ~~~Nv~g~~~l~~a~~~~~~-~~v~~SS-~~vyg~~~~~~~~~~~~~~~~~~~~E~~~------~~~~~~Y~~sK~~~e~ 170 (348)
T 1oc2_A 99 IHTNFIGTYTLLEAARKYDI-RFHHVST-DEVYGDLPLREDLPGHGEGPGEKFTAETN------YNPSSPYSSTKAASDL 170 (348)
T ss_dssp HHHHTHHHHHHHHHHHHHTC-EEEEEEE-GGGGCCBCCGGGSTTTTCSTTSSBCTTSC------CCCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCC-eEEEecc-cceeCCCcccccccccccccCCCcCCCCC------CCCCCccHHHHHHHHH
Confidence 57899999999999999988 9999999 5999765320 0126777765 3567899999999999
Q ss_pred HHHHHHHHcCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCc-cC--CCCCCceehHHHHHHHHHhhcCCCCCce
Q 026418 73 AAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKT-YA--NSVQAYVHVRDVALAHILVYETPSASGR 149 (239)
Q Consensus 73 ~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~i~v~D~a~~~~~~~~~~~~~~~ 149 (239)
+++.++++.+++++++||+.+|||..... .....++..+..+..+. ++ +..++++|++|+|++++.++.....+++
T Consensus 171 ~~~~~~~~~gi~~~ilrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~g~~ 249 (348)
T 1oc2_A 171 IVKAWVRSFGVKATISNCSNNYGPYQHIE-KFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKGRMGET 249 (348)
T ss_dssp HHHHHHHHHCCEEEEEEECCEESTTCCTT-SHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHHHCCTTCE
T ss_pred HHHHHHHHhCCCEEEEeeceeeCCCCCcc-chHHHHHHHHHcCCCceEecCCCceEeeEEHHHHHHHHHHHhhCCCCCCe
Confidence 99999888899999999999999986432 23345566777777654 33 4567899999999999999976544459
Q ss_pred EEEe-cCCCCHHHHHHHHHHhCCCCCCC-CCCCCCCCCCCCCcccChHHHHh-hCCce-eC-HHHHHHHHHHHHHHc
Q 026418 150 YLCA-ESVLHRGEVVEILAKFFPEYPIP-TKCSDEKNPRKKPYKFSNQKLKD-LGLEF-TP-VKQCLYETVKSLQEK 221 (239)
Q Consensus 150 y~~~-~~~~s~~el~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~k~~~-lg~~p-~~-~~e~i~~~~~~~~~~ 221 (239)
||++ +.++|+.|+++.+.+.+ +.+.+ ...............+|++|+++ |||+| ++ ++++|+++++|++++
T Consensus 250 ~~i~~~~~~s~~e~~~~i~~~~-g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~~l~~~~~~~~~~ 325 (348)
T 1oc2_A 250 YLIGADGEKNNKEVLELILEKM-GQPKDAYDHVTDRAGHDLRYAIDASKLRDELGWTPQFTDFSEGLEETIQWYTDN 325 (348)
T ss_dssp EEECCSCEEEHHHHHHHHHHHT-TCCTTCSEEECCCTTCCCBCCBCCHHHHHHHCCCCSCCCHHHHHHHHHHHHHHT
T ss_pred EEeCCCCCCCHHHHHHHHHHHh-CCCccccccCCCCCCcccccccCHHHHHHHcCCCCCCCcHHHHHHHHHHHHHHh
Confidence 9887 67899999999999997 43322 11111122223456789999976 99999 77 999999999999865
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.4e-30 Score=213.89 Aligned_cols=212 Identities=21% Similarity=0.255 Sum_probs=160.3
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCC----CCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRS----PDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~----~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.+|+++|++.++++|||+|| .++|+..... ...+++|+++. .|.+.|+.+|.++|.+++.+
T Consensus 117 ~~~Nv~g~~~ll~a~~~~~~~~iv~~SS-~~v~g~~~~~~~~~~~~~~~E~~~~------~p~~~Y~~sK~~~e~~~~~~ 189 (397)
T 1gy8_A 117 YDNNVVGILRLLQAMLLHKCDKIIFSSS-AAIFGNPTMGSVSTNAEPIDINAKK------SPESPYGESKLIAERMIRDC 189 (397)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEEEE-GGGTBSCCC-----CCCCBCTTSCC------BCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHhCCCEEEEECC-HHHhCCCCcccccccccCcCccCCC------CCCCchHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999 5999865410 01277888763 56789999999999999999
Q ss_pred HHHcCccEEEEecCcccCCCCCCC-------CChhHHHHH-----HHHcCCC------------C-ccC--------CCC
Q 026418 78 AVARGVDLVVVNPVLVLGPLLQST-------VNASIIHIL-----KYLNGSA------------K-TYA--------NSV 124 (239)
Q Consensus 78 ~~~~~~~~~i~Rp~~v~G~~~~~~-------~~~~~~~~~-----~~~~~~~------------~-~~~--------~~~ 124 (239)
+.+.+++++++||+++|||..... .......+. ++..+.. + .++ +..
T Consensus 190 ~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~ 269 (397)
T 1gy8_A 190 AEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCV 269 (397)
T ss_dssp HHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC-----------CCCEEEECSCSSSTTSSCE
T ss_pred HHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHHHhcCccccccccccCCCceeecCcccCCCCCee
Confidence 888899999999999999964211 112222222 4445542 2 122 346
Q ss_pred CCceehHHHHHHHHHhhcCCC-C-----C---ceEEEe-cCCCCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcccCh
Q 026418 125 QAYVHVRDVALAHILVYETPS-A-----S---GRYLCA-ESVLHRGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSN 194 (239)
Q Consensus 125 ~~~i~v~D~a~~~~~~~~~~~-~-----~---~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (239)
++|+|++|+|++++.++.++. . . ++||++ ++++|+.|+++.+.+.+ +.+++....+..........+|+
T Consensus 270 ~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~-g~~~~~~~~~~~~~~~~~~~~d~ 348 (397)
T 1gy8_A 270 RDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEVARKTT-GHPIPVRECGRREGDPAYLVAAS 348 (397)
T ss_dssp ECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHHHHHHHH-CCCCCEEEECCCTTCCSEECBCC
T ss_pred EeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCCcccHHHHHHHHHHHh-CCCCCeeeCCCCCCcccccccCH
Confidence 789999999999999987532 2 2 689887 78899999999999997 54444333332233445688999
Q ss_pred HHHHh-hCCce-e-CHHHHHHHHHHHHHHc
Q 026418 195 QKLKD-LGLEF-T-PVKQCLYETVKSLQEK 221 (239)
Q Consensus 195 ~k~~~-lg~~p-~-~~~e~i~~~~~~~~~~ 221 (239)
+|+++ |||+| + +++++|+++++|++++
T Consensus 349 ~k~~~~lG~~p~~~~l~e~l~~~~~~~~~~ 378 (397)
T 1gy8_A 349 DKAREVLGWKPKYDTLEAIMETSWKFQRTH 378 (397)
T ss_dssp HHHHHHTCCCCSCCSHHHHHHHHHHHHHTC
T ss_pred HHHHHHhCCCCCcCCHHHHHHHHHHHHHhc
Confidence 99965 99999 6 9999999999999876
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=3.6e-30 Score=203.96 Aligned_cols=199 Identities=17% Similarity=0.094 Sum_probs=159.8
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+++|+.++.+++++|++.++ +|||+|| .++|+..... +++|+++ ..|.+.|+.+|..+|++++.+.
T Consensus 80 ~~~n~~~~~~l~~~~~~~~~-~~v~~SS-~~vy~~~~~~---~~~E~~~------~~p~~~Y~~sK~~~E~~~~~~~--- 145 (287)
T 3sc6_A 80 YVINAIGARNVAVASQLVGA-KLVYIST-DYVFQGDRPE---GYDEFHN------PAPINIYGASKYAGEQFVKELH--- 145 (287)
T ss_dssp HHHHTHHHHHHHHHHHHHTC-EEEEEEE-GGGSCCCCSS---CBCTTSC------CCCCSHHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHHHHHcCC-eEEEEch-hhhcCCCCCC---CCCCCCC------CCCCCHHHHHHHHHHHHHHHhC---
Confidence 57899999999999999997 7999999 5999876654 7899876 3568899999999999998764
Q ss_pred CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCc-cCCCCCCceehHHHHHHHHHhhcCCCCCceEEEe-cCCCCH
Q 026418 82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKT-YANSVQAYVHVRDVALAHILVYETPSASGRYLCA-ESVLHR 159 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~ 159 (239)
.+++++||+.+|||... .....++..+..+.... +++..++++|++|+|++++.++.++. .++||++ ++.+|+
T Consensus 146 -~~~~ilR~~~v~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-~~~~~i~~~~~~s~ 220 (287)
T 3sc6_A 146 -NKYFIVRTSWLYGKYGN---NFVKTMIRLGKEREEISVVADQIGSPTYVADLNVMINKLIHTSL-YGTYHVSNTGSCSW 220 (287)
T ss_dssp -SSEEEEEECSEECSSSC---CHHHHHHHHHTTCSEEEEECSCEECCEEHHHHHHHHHHHHTSCC-CEEEECCCBSCEEH
T ss_pred -CCcEEEeeeeecCCCCC---cHHHHHHHHHHcCCCeEeecCcccCceEHHHHHHHHHHHHhCCC-CCeEEEcCCCcccH
Confidence 47899999999998743 23344555666666554 46778899999999999999998776 6699887 678999
Q ss_pred HHHHHHHHHhCCCCCCCCCCC-----CCCCCCCCCcccChHHHHhhCCce-eCHHHHHHHHHHHHHH
Q 026418 160 GEVVEILAKFFPEYPIPTKCS-----DEKNPRKKPYKFSNQKLKDLGLEF-TPVKQCLYETVKSLQE 220 (239)
Q Consensus 160 ~el~~~i~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~k~~~lg~~p-~~~~e~i~~~~~~~~~ 220 (239)
.|+++.+.+.+ +.+.+.... +..........+|++|+++|||.| ++++++|+++++|+++
T Consensus 221 ~e~~~~i~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~~~~~l~~~~~~~~~ 286 (287)
T 3sc6_A 221 FEFAKKIFSYA-NMKVNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFLQMPSWEEGLERFFIETKS 286 (287)
T ss_dssp HHHHHHHHHHH-TCCCEEEEECHHHHCCSSCCCSBCCBCCHHHHHTTCCCCCBHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHc-CCCcceeeeehhhcCcccCCCCcccccHHHHHhhCCCCCccHHHHHHHHHHHHhc
Confidence 99999999997 433222111 222334566889999999999999 9999999999999854
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-30 Score=207.84 Aligned_cols=207 Identities=15% Similarity=0.152 Sum_probs=150.2
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+++|+.++.+++++|++.++ +|||+||. ++|+..... +++|+++ ..|.+.|+.+|..+|.+++.++++.
T Consensus 90 ~~~n~~~~~~l~~a~~~~~~-~~v~~SS~-~v~g~~~~~---~~~E~~~------~~p~~~Y~~sK~~~e~~~~~~~~~~ 158 (310)
T 1eq2_A 90 MDNNYQYSKELLHYCLEREI-PFLYASSA-ATYGGRTSD---FIESREY------EKPLNVYGYSKFLFDEYVRQILPEA 158 (310)
T ss_dssp HHHTHHHHHHHHHHHHHHTC-CEEEEEEG-GGGTTCCSC---BCSSGGG------CCCSSHHHHHHHHHHHHHHHHGGGC
T ss_pred HHHHHHHHHHHHHHHHHcCC-eEEEEeeH-HHhCCCCCC---CCCCCCC------CCCCChhHHHHHHHHHHHHHHHHHc
Confidence 57899999999999999999 99999994 999876543 6777764 3567899999999999999998888
Q ss_pred CccEEEEecCcccCCCCCCC---CChhHHHHHHHHcCCCCc-cCC--C-CCCceehHHHHHHHHHhhcCCCCCceEEEe-
Q 026418 82 GVDLVVVNPVLVLGPLLQST---VNASIIHILKYLNGSAKT-YAN--S-VQAYVHVRDVALAHILVYETPSASGRYLCA- 153 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~-~~~--~-~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~- 153 (239)
+++++++||+.+|||+.... ......++..+..+..+. +++ . .++|+|++|+|++++.++.++. +++||++
T Consensus 159 g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~~~~-~~~~~i~~ 237 (310)
T 1eq2_A 159 NSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV-SGIFNLGT 237 (310)
T ss_dssp SSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC-CEEEEESC
T ss_pred CCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHHhcCC-CCeEEEeC
Confidence 99999999999999975421 123345566677777654 443 5 7799999999999999998766 5699887
Q ss_pred cCCCCHHHHHHHHHHhCCCCCCCCCCCCC--CCCCCCCcccChHHHHhhCC-ce-eCHHHHHHHHHHHHHH
Q 026418 154 ESVLHRGEVVEILAKFFPEYPIPTKCSDE--KNPRKKPYKFSNQKLKDLGL-EF-TPVKQCLYETVKSLQE 220 (239)
Q Consensus 154 ~~~~s~~el~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~k~~~lg~-~p-~~~~e~i~~~~~~~~~ 220 (239)
++++|+.|+++.+.+.++...++....+. .........+|++|+++||| .| ++++++|+++++|+++
T Consensus 238 ~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~~~~~l~~~l~~~~~~~~~ 308 (310)
T 1eq2_A 238 GRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWLNR 308 (310)
T ss_dssp SCCBCHHHHHHHC---------------------CCCSCCBCCHHHHHTTCCCCCCCHHHHHHHHHHHTC-
T ss_pred CCccCHHHHHHHHHHHcCCCCceeCCCChhhhcccccccccchHHHHhcCCCCCCCCHHHHHHHHHHHHHh
Confidence 78999999999999987322122111111 11223456789999988999 67 9999999999999864
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.6e-30 Score=207.59 Aligned_cols=208 Identities=20% Similarity=0.265 Sum_probs=164.6
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccC----CchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNT----KNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~----~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.+++++|.+.++++|||+|| .++|+..... ..+ +|+++. .| .+.|+.+|..+|.+++.+
T Consensus 99 ~~~n~~~~~~l~~a~~~~~~~~~v~~SS-~~~~~~~~~~-~~~-~E~~~~------~p~~~~~~~Y~~sK~~~e~~~~~~ 169 (342)
T 2x4g_A 99 VASALGQTNPFYAACLQARVPRILYVGS-AYAMPRHPQG-LPG-HEGLFY------DSLPSGKSSYVLCKWALDEQAREQ 169 (342)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSCEEEECC-GGGSCCCTTS-SCB-CTTCCC------SSCCTTSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCeEEEECC-HHhhCcCCCC-CCC-CCCCCC------CccccccChHHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999 5999765431 114 777763 44 789999999999999999
Q ss_pred HHHcCccEEEEecCcccCCCC-CCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCceEEEe-cC
Q 026418 78 AVARGVDLVVVNPVLVLGPLL-QSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCA-ES 155 (239)
Q Consensus 78 ~~~~~~~~~i~Rp~~v~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~ 155 (239)
++. |++++++||+.+||+.. ... ...++..+..+..+.+++..++++|++|+|++++.++.++..+++||++ +.
T Consensus 170 ~~~-g~~~~ilrp~~v~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~g~~~~v~~~~ 245 (342)
T 2x4g_A 170 ARN-GLPVVIGIPGMVLGELDIGPT---TGRVITAIGNGEMTHYVAGQRNVIDAAEAGRGLLMALERGRIGERYLLTGHN 245 (342)
T ss_dssp HHT-TCCEEEEEECEEECSCCSSCS---TTHHHHHHHTTCCCEEECCEEEEEEHHHHHHHHHHHHHHSCTTCEEEECCEE
T ss_pred hhc-CCcEEEEeCCceECCCCcccc---HHHHHHHHHcCCCccccCCCcceeeHHHHHHHHHHHHhCCCCCceEEEcCCc
Confidence 877 99999999999999976 321 2345666777766545677789999999999999999876554599887 56
Q ss_pred CCCHHHHHHHHHHhCCCCCCCCCCCC--------------------------C-CCCCCCCcccChHHHHh-hCC-ceeC
Q 026418 156 VLHRGEVVEILAKFFPEYPIPTKCSD--------------------------E-KNPRKKPYKFSNQKLKD-LGL-EFTP 206 (239)
Q Consensus 156 ~~s~~el~~~i~~~~~~~~~~~~~~~--------------------------~-~~~~~~~~~~~~~k~~~-lg~-~p~~ 206 (239)
+|+.|+++.+.+.+ +.+.+. ..+ . .........+|++|+++ ||| +|++
T Consensus 246 -~s~~e~~~~i~~~~-g~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~~p~~ 322 (342)
T 2x4g_A 246 -LEMADLTRRIAELL-GQPAPQ-PMSMAMARALATLGRLRYRVSGQLPLLDETAIEVMAGGQFLDGRKAREELGFFSTTA 322 (342)
T ss_dssp -EEHHHHHHHHHHHH-TCCCCE-EECHHHHHHHHHHHHC----------------CCTTCCCCBCCHHHHHHHCCCCCSC
T ss_pred -ccHHHHHHHHHHHh-CCCCCC-cCCHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHhcCcccChHHHHHhCCCCCCCC
Confidence 99999999999987 433321 100 0 01113467889999977 899 9999
Q ss_pred HHHHHHHHHHHHHHcCCCC
Q 026418 207 VKQCLYETVKSLQEKGHLP 225 (239)
Q Consensus 207 ~~e~i~~~~~~~~~~g~~~ 225 (239)
++++|+++++|++++|.++
T Consensus 323 ~~~~l~~~~~~~~~~g~~~ 341 (342)
T 2x4g_A 323 LDDTLLRAIDWFRDNGYFN 341 (342)
T ss_dssp HHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHcCCCC
Confidence 9999999999999999875
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=9.8e-30 Score=205.95 Aligned_cols=210 Identities=19% Similarity=0.194 Sum_probs=157.4
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+++|+.++.+++++|++.++++|||+|| .++|+..... +++|+++.. .+.+.|+.+|.++|.+++.++++.
T Consensus 97 ~~~n~~~~~~l~~~~~~~~~~~iv~~SS-~~~~g~~~~~---~~~e~~~~~-----~~~~~Y~~sK~~~e~~~~~~~~~~ 167 (338)
T 1udb_A 97 YDNNVNGTLRLISAMRAANVKNFIFSSS-ATVYGDNPKI---PYVESFPTG-----TPQSPYGKSKLMVEQILTDLQKAQ 167 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEEEEE-GGGGCSCCSS---SBCTTSCCC-----CCSSHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHhcCCCeEEEEcc-HHHhCCCCCC---CcCcccCCC-----CCCChHHHHHHHHHHHHHHHHHhc
Confidence 5789999999999999999999999999 5999876543 678876521 126789999999999999998776
Q ss_pred -CccEEEEecCcccCCCCC------CC--CChhHHHHHHHHcC--CCCc-c--------CCCCCCceehHHHHHHHHHhh
Q 026418 82 -GVDLVVVNPVLVLGPLLQ------ST--VNASIIHILKYLNG--SAKT-Y--------ANSVQAYVHVRDVALAHILVY 141 (239)
Q Consensus 82 -~~~~~i~Rp~~v~G~~~~------~~--~~~~~~~~~~~~~~--~~~~-~--------~~~~~~~i~v~D~a~~~~~~~ 141 (239)
+++++++||+++||+... .. .......+.....+ .... + +++.++|+|++|+|++++.++
T Consensus 168 ~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~l 247 (338)
T 1udb_A 168 PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVVAM 247 (338)
T ss_dssp TTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHH
T ss_pred CCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEEHHHHHHHHHHHH
Confidence 899999999999998421 11 11122333333332 2211 1 235678999999999999988
Q ss_pred cCC--CCC-ceEEEe-cCCCCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcccChHHHHh-hCCce-eCHHHHHHHHH
Q 026418 142 ETP--SAS-GRYLCA-ESVLHRGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKD-LGLEF-TPVKQCLYETV 215 (239)
Q Consensus 142 ~~~--~~~-~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p-~~~~e~i~~~~ 215 (239)
++. ..+ ++||++ ++++|+.|+++.+.+.+ +.+++....+..........+|++|+++ |||+| ++++++|++++
T Consensus 248 ~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~-g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~ 326 (338)
T 1udb_A 248 EKLANKPGVHIYNLGAGVGNSVLDVVNAFSKAC-GKPVNYHFAPRREGDLPAYWADASKADRELNWRVTRTLDEMAQDTW 326 (338)
T ss_dssp HHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHH-TSCCCEEEECCCTTCCSBCCBCCHHHHHHHCCCCCCCHHHHHHHHH
T ss_pred hhhhccCCCcEEEecCCCceeHHHHHHHHHHHh-CCCCcceeCCCCCCchhhhhcCHHHHHHHcCCCcCCCHHHHHHHHH
Confidence 753 233 389887 78899999999999986 5544433333233344567889999966 89999 89999999999
Q ss_pred HHHHHc
Q 026418 216 KSLQEK 221 (239)
Q Consensus 216 ~~~~~~ 221 (239)
+|++++
T Consensus 327 ~w~~~~ 332 (338)
T 1udb_A 327 HWQSRH 332 (338)
T ss_dssp HHHHHC
T ss_pred HHHHhc
Confidence 999865
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-30 Score=208.46 Aligned_cols=209 Identities=13% Similarity=0.134 Sum_probs=157.4
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+++|+.++.+++++|++.++++|||+|| .++|+..... .+.+|+++ ..|.+.|+.+|..+|.+++.++++.
T Consensus 91 ~~~n~~~~~~l~~~~~~~~~~~~v~~SS-~~~~~~~~~~--~~~~e~~~------~~~~~~Y~~sK~~~e~~~~~~~~~~ 161 (312)
T 2yy7_A 91 WDLNMNSLFHVLNLAKAKKIKKIFWPSS-IAVFGPTTPK--ENTPQYTI------MEPSTVYGISKQAGERWCEYYHNIY 161 (312)
T ss_dssp HHHHHHHHHHHHHHHHTTSCSEEECCEE-GGGCCTTSCS--SSBCSSCB------CCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEecc-HHHhCCCCCC--CCccccCc------CCCCchhHHHHHHHHHHHHHHHHhc
Confidence 5789999999999999999999999999 5999864421 25677764 3567899999999999999998888
Q ss_pred CccEEEEecCcccCCCCCCCC---ChhHHHHHHHH-cCCCCcc--CCCCCCceehHHHHHHHHHhhcCCCC----CceEE
Q 026418 82 GVDLVVVNPVLVLGPLLQSTV---NASIIHILKYL-NGSAKTY--ANSVQAYVHVRDVALAHILVYETPSA----SGRYL 151 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~~---~~~~~~~~~~~-~~~~~~~--~~~~~~~i~v~D~a~~~~~~~~~~~~----~~~y~ 151 (239)
+++++++||+.+||+...+.. ......+...+ .+....+ ++..++|+|++|+|++++.+++++.. +++||
T Consensus 162 ~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~n 241 (312)
T 2yy7_A 162 GVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAPVEKIKIHSSYN 241 (312)
T ss_dssp CCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHHHHHHHHSCGGGCCCSSCEE
T ss_pred CCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHHHHHHHhCcccccccCceEE
Confidence 999999999999997654322 12223333433 4443333 45678899999999999999987643 25999
Q ss_pred EecCCCCHHHHHHHHHHhCCCCCCCCCCCCCC-CCCCCCcccChHHHHh-hCCce-eCHHHHHHHHHHHHH
Q 026418 152 CAESVLHRGEVVEILAKFFPEYPIPTKCSDEK-NPRKKPYKFSNQKLKD-LGLEF-TPVKQCLYETVKSLQ 219 (239)
Q Consensus 152 ~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~k~~~-lg~~p-~~~~e~i~~~~~~~~ 219 (239)
++++.+|+.|+++.+.+.++...++....... ........+|++|+++ |||+| ++++++|+++++|++
T Consensus 242 i~~~~~s~~e~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~~~k 312 (312)
T 2yy7_A 242 LAAMSFTPTEIANEIKKHIPEFTITYEPDFRQKIADSWPASIDDSQAREDWDWKHTFDLESMTKDMIEHLS 312 (312)
T ss_dssp CCSEEECHHHHHHHHHTTCTTCEEEECCCTHHHHHTTSCSSBCCHHHHHHHCCCCCCCHHHHHHHHHHHHC
T ss_pred eCCCccCHHHHHHHHHHHCCCCceEeccCccccccccccccCCHHHHHHHcCCCCCCCHHHHHHHHHHHhC
Confidence 98888999999999999975332221111000 0011235789999977 99999 899999999999974
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-29 Score=209.19 Aligned_cols=215 Identities=19% Similarity=0.188 Sum_probs=163.3
Q ss_pred chhHhHHHHHHHHHHHhcCC-CEEEEccchhhhccCCCCCCCccccCCCCCChh--------hcccCCchHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKV-RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLE--------FCKNTKNWYCYGKAVAEK 72 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v-~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~--------~~~~~~~~Y~~sK~~~E~ 72 (239)
+++|+.|+.+++++|++.++ ++|||+|| .++|+... . +++|+.+.... .+..|.+.|+.+|.++|.
T Consensus 127 ~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS-~~vyg~~~-~---~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~ 201 (404)
T 1i24_A 127 QHNNVIGTLNVLFAIKEFGEECHLVKLGT-MGEYGTPN-I---DIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSH 201 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCEEEEECC-GGGGCCCS-S---CBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCcEEEEeCc-HHHhCCCC-C---CCCccccccccccccccccCCCCCCChhHHHHHHHHH
Confidence 46899999999999999987 59999999 59998654 2 56665221000 123567899999999999
Q ss_pred HHHHHHHHcCccEEEEecCcccCCCCCCC----------------CChhHHHHHHHHcCCCCc-cCC--CCCCceehHHH
Q 026418 73 AAWEEAVARGVDLVVVNPVLVLGPLLQST----------------VNASIIHILKYLNGSAKT-YAN--SVQAYVHVRDV 133 (239)
Q Consensus 73 ~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~----------------~~~~~~~~~~~~~~~~~~-~~~--~~~~~i~v~D~ 133 (239)
+++.+++..|++++++||+.+|||+.... ......++..+..|..+. +++ ..++|+|++|+
T Consensus 202 ~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dv 281 (404)
T 1i24_A 202 NIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDT 281 (404)
T ss_dssp HHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHH
T ss_pred HHHHHHHhcCCeEEEEecceeeCCCCCccccccccccccccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHH
Confidence 99999888899999999999999976421 233456677778887653 444 56899999999
Q ss_pred HHHHHHhhcCCCC-C--ceEEEecCCCCHHHHHHHHHHh---CCCCCCCCCCCCCCC--CCCCCcccChHHHHhhCCce-
Q 026418 134 ALAHILVYETPSA-S--GRYLCAESVLHRGEVVEILAKF---FPEYPIPTKCSDEKN--PRKKPYKFSNQKLKDLGLEF- 204 (239)
Q Consensus 134 a~~~~~~~~~~~~-~--~~y~~~~~~~s~~el~~~i~~~---~~~~~~~~~~~~~~~--~~~~~~~~~~~k~~~lg~~p- 204 (239)
|++++.++.++.. + .+||++++++|+.|+++.+.+. + +.+++....+... .......+|++|+++|||+|
T Consensus 282 a~a~~~~l~~~~~~g~~~~yni~~~~~s~~e~~~~i~~~~~~~-g~~~~~~~~p~~~~~~~~~~~~~d~~k~~~LG~~p~ 360 (404)
T 1i24_A 282 VQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGSKL-GLDVKKMTVPNPRVEAEEHYYNAKHTKLMELGLEPH 360 (404)
T ss_dssp HHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHHHTT-TCCCCEEEECCSSCSCSSCCCCBCCCHHHHTTCCCC
T ss_pred HHHHHHHHhCcccCCCceEEEECCCCCcHHHHHHHHHHHHHhh-CCCccccccCcccCccccceEecCHHHHHHcCCCcC
Confidence 9999999987654 3 3899887889999999999997 4 3333322112111 12345678999998899999
Q ss_pred eCHHHHHHHHHHHHHHcC
Q 026418 205 TPVKQCLYETVKSLQEKG 222 (239)
Q Consensus 205 ~~~~e~i~~~~~~~~~~g 222 (239)
++++++++++++|++...
T Consensus 361 ~~~~~~l~~~~~~~~~~~ 378 (404)
T 1i24_A 361 YLSDSLLDSLLNFAVQFK 378 (404)
T ss_dssp CCCHHHHHHHHHHHHHTG
T ss_pred cCHHHHHHHHHHHHHhhh
Confidence 899999999999997654
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3e-29 Score=206.19 Aligned_cols=213 Identities=14% Similarity=0.116 Sum_probs=163.2
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCC--CCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRS--PDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~--~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++.+++++|++.++++|||+|| .++|+..... ...+++|+++. +..|.+.|+.+|..+|.+++.+++
T Consensus 118 ~~~Nv~g~~~ll~a~~~~~~~~~V~~SS-~~v~~~~~~~~~~~~~~~E~~~~----~~~~~~~Y~~sK~~~E~~~~~~~~ 192 (379)
T 2c5a_A 118 MYNNTMISFNMIEAARINGIKRFFYASS-ACIYPEFKQLETTNVSLKESDAW----PAEPQDAFGLEKLATEELCKHYNK 192 (379)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEEEE-GGGSCGGGSSSSSSCEECGGGGS----SBCCSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEEee-hheeCCCCCCCccCCCcCcccCC----CCCCCChhHHHHHHHHHHHHHHHH
Confidence 5689999999999999999999999999 5999764321 01246666521 135678999999999999999988
Q ss_pred HcCccEEEEecCcccCCCCCCCC---ChhHHHHHHHHcCCC-Cc-cC--CCCCCceehHHHHHHHHHhhcCCCCCceEEE
Q 026418 80 ARGVDLVVVNPVLVLGPLLQSTV---NASIIHILKYLNGSA-KT-YA--NSVQAYVHVRDVALAHILVYETPSASGRYLC 152 (239)
Q Consensus 80 ~~~~~~~i~Rp~~v~G~~~~~~~---~~~~~~~~~~~~~~~-~~-~~--~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~ 152 (239)
+.+++++++||+.+|||...... .....++..+..+.. +. ++ +..++|+|++|+|++++.++.++ .+++||+
T Consensus 193 ~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~-~~~~~ni 271 (379)
T 2c5a_A 193 DFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSD-FREPVNI 271 (379)
T ss_dssp HHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHHSS-CCSCEEE
T ss_pred HHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHHHHHhhcc-CCCeEEe
Confidence 88999999999999999764321 134455666767765 32 44 35678999999999999999865 4458987
Q ss_pred e-cCCCCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcccChHHHHh-hCCce-eCHHHHHHHHHHHHHHcC
Q 026418 153 A-ESVLHRGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKD-LGLEF-TPVKQCLYETVKSLQEKG 222 (239)
Q Consensus 153 ~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p-~~~~e~i~~~~~~~~~~g 222 (239)
+ ++.+|+.|+++.+.+.+ +.+.+....+.. .......+|++|+++ |||+| ++++++|+++++|++++.
T Consensus 272 ~~~~~~s~~e~~~~i~~~~-g~~~~~~~~p~~-~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~ 342 (379)
T 2c5a_A 272 GSDEMVSMNEMAEMVLSFE-EKKLPIHHIPGP-EGVRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWIKEQI 342 (379)
T ss_dssp CCCCCEEHHHHHHHHHHTT-TCCCCEEEECCC-CCCSBCEECCHHHHHHHSCCCCCCHHHHHHHHHHHHHHHH
T ss_pred CCCCccCHHHHHHHHHHHh-CCCCceeeCCCC-CCcccccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhH
Confidence 7 68999999999999997 443332222211 123456789999976 99999 799999999999998653
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-29 Score=201.08 Aligned_cols=216 Identities=16% Similarity=0.172 Sum_probs=160.5
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+++|+.++.+++++|++.++++|||+|| .++|+..... .+.+|+++ ..|.+.|+.+|..+|.+++.++++.
T Consensus 85 ~~~n~~~~~~l~~a~~~~~~~~~v~~SS-~~~~~~~~~~--~~~~e~~~------~~p~~~Y~~sK~~~e~~~~~~~~~~ 155 (317)
T 3ajr_A 85 YKVNMNGTYNILEAAKQHRVEKVVIPST-IGVFGPETPK--NKVPSITI------TRPRTMFGVTKIAAELLGQYYYEKF 155 (317)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEEEE-GGGCCTTSCS--SSBCSSSC------CCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhHHHHHHHHHHHHcCCCEEEEecC-HHHhCCCCCC--CCcccccc------CCCCchHHHHHHHHHHHHHHHHHhc
Confidence 5789999999999999999999999999 5999764321 25667655 3568899999999999999998888
Q ss_pred CccEEEEecCcccCCCCCCCC---ChhHHHHHHHHcCCC-Ccc--CCCCCCceehHHHHHHHHHhhcCCCC----CceEE
Q 026418 82 GVDLVVVNPVLVLGPLLQSTV---NASIIHILKYLNGSA-KTY--ANSVQAYVHVRDVALAHILVYETPSA----SGRYL 151 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~~---~~~~~~~~~~~~~~~-~~~--~~~~~~~i~v~D~a~~~~~~~~~~~~----~~~y~ 151 (239)
+++++++||+.+||+...+.. ......+...+.+.. ..+ ++..++|+|++|+|++++.++.++.. +++||
T Consensus 156 ~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~~~~g~~~~ 235 (317)
T 3ajr_A 156 GLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRDKLVLRNGYN 235 (317)
T ss_dssp CCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHHHHHCCGGGCSSCSCEE
T ss_pred CCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHHHHhCCccccccCceEe
Confidence 999999999999997643321 122233344444333 333 45678899999999999999986542 35999
Q ss_pred EecCCCCHHHHHHHHHHhCCCCCCCCCCCCC-CCCCCCCcccChHHHHh-hCCce-eCHHHHHHHHHHHHHHcCCCCC
Q 026418 152 CAESVLHRGEVVEILAKFFPEYPIPTKCSDE-KNPRKKPYKFSNQKLKD-LGLEF-TPVKQCLYETVKSLQEKGHLPI 226 (239)
Q Consensus 152 ~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~k~~~-lg~~p-~~~~e~i~~~~~~~~~~g~~~~ 226 (239)
+++..+|+.|+++.+.+.++...++...... .........+|++|+++ |||+| ++++++|+++++|++++....+
T Consensus 236 i~~~~~s~~e~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~~~~g 313 (317)
T 3ajr_A 236 VTAYTFTPSELYSKIKERIPEFEIEYKEDFRDKIAATWPESLDSSEASNEWGFSIEYDLDRTIDDMIDHISEKLGIEG 313 (317)
T ss_dssp CCSEEECHHHHHHHHHTTCCSCCEEECCCHHHHHHTTSCSCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHTTSSC
T ss_pred cCCccccHHHHHHHHHHHCCccccccccccchhhccccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhhhcccc
Confidence 9887899999999999997533322211000 00011235789999976 99999 8999999999999987654443
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-29 Score=205.79 Aligned_cols=207 Identities=15% Similarity=0.150 Sum_probs=161.2
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+++|+.++.+++++|++.++ +|||+|| .++|+..... +++|+++ ..|.+.|+.+|..+|.+++.++++.
T Consensus 137 ~~~n~~~~~~ll~a~~~~~~-r~V~~SS-~~v~g~~~~~---~~~E~~~------~~p~~~Y~~sK~~~E~~~~~~~~~~ 205 (357)
T 2x6t_A 137 MDNNYQYSKELLHYCLEREI-PFLYASS-AATYGGRTSD---FIESREY------EKPLNVFGYSKFLFDEYVRQILPEA 205 (357)
T ss_dssp HHHTHHHHHHHHHHHHHHTC-CEEEEEE-GGGGCSCSSC---CCSSGGG------CCCSSHHHHHHHHHHHHHHHHGGGC
T ss_pred HHHHHHHHHHHHHHHHHcCC-eEEEEcc-hHHhCCCCCC---CcCCcCC------CCCCChhHHHHHHHHHHHHHHHHHc
Confidence 57899999999999999998 9999999 4899876544 6777764 3567899999999999999998888
Q ss_pred CccEEEEecCcccCCCCCCC---CChhHHHHHHHHcCCCCc-cCC--C-CCCceehHHHHHHHHHhhcCCCCCceEEEe-
Q 026418 82 GVDLVVVNPVLVLGPLLQST---VNASIIHILKYLNGSAKT-YAN--S-VQAYVHVRDVALAHILVYETPSASGRYLCA- 153 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~-~~~--~-~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~- 153 (239)
+++++++||+.+|||+.... ......++..+..+..+. +++ . .++|+|++|+|++++.++.++. +++||++
T Consensus 206 g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~-~~~~~i~~ 284 (357)
T 2x6t_A 206 NSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV-SGIFNLGT 284 (357)
T ss_dssp SSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHHHHHHCC-CEEEEESC
T ss_pred CCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHHHHhcCC-CCeEEecC
Confidence 99999999999999976432 123334556677777654 444 3 6689999999999999998766 5699887
Q ss_pred cCCCCHHHHHHHHHHhCCCCCCCCCCCCC--CCCCCCCcccChHHHHhhCC-ce-eCHHHHHHHHHHHHHH
Q 026418 154 ESVLHRGEVVEILAKFFPEYPIPTKCSDE--KNPRKKPYKFSNQKLKDLGL-EF-TPVKQCLYETVKSLQE 220 (239)
Q Consensus 154 ~~~~s~~el~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~k~~~lg~-~p-~~~~e~i~~~~~~~~~ 220 (239)
++++|+.|+++.+.+.++...++....+. .........+|++|+++||| .| ++++++|+++++|+++
T Consensus 285 ~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~~~~~~l~e~l~~~~~~~~~ 355 (357)
T 2x6t_A 285 GRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWLNR 355 (357)
T ss_dssp SCCEEHHHHHHHHHHHHTCCCCEEECCCGGGTTSCCSBCCCCCHHHHHTTCCCCCCCHHHHHHHHHHHHC-
T ss_pred CCcccHHHHHHHHHHHcCCCCceecCCCcccccccccccccCHHHHHHcCCCCCCCCHHHHHHHHHHHHhh
Confidence 68899999999999997322122111111 11223456789999988999 67 9999999999999864
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-29 Score=206.10 Aligned_cols=212 Identities=16% Similarity=0.132 Sum_probs=158.5
Q ss_pred chhHhHHHHHHHHHHHhcCCC-EEEEccchhhhccCCCCCC-------------CccccCCCCCChhhcccCCchHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKVR-RVVFTSSIGAVYMDPNRSP-------------DDVVDESCWSDLEFCKNTKNWYCYGK 67 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~-~~i~~Ss~~~vy~~~~~~~-------------~~~~~E~~~~~~~~~~~~~~~Y~~sK 67 (239)
+++|+.++.+++++|.+.+++ +|||+|| .++|+.....+ ..+++|+++ ..|.+.|+.+|
T Consensus 97 ~~~nv~~~~~l~~a~~~~~~~~~iv~~SS-~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~~------~~~~~~Y~~sK 169 (347)
T 1orr_A 97 FEINVGGTLNLLEAVRQYNSNCNIIYSST-NKVYGDLEQYKYNETETRYTCVDKPNGYDESTQ------LDFHSPYGCSK 169 (347)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCEEEEEEE-GGGGTTCTTSCEEECSSCEEETTCTTCBCTTSC------CCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCceEEEecc-HHHhCCCCcCCcccccccccccccccCccccCC------CCCCCchHHHH
Confidence 578999999999999999885 9999999 59998654321 012344433 34678899999
Q ss_pred HHHHHHHHHHHHHcCccEEEEecCcccCCCCCCCC--ChhHHHHHHHHcCC-----CCc-c--CCCCCCceehHHHHHHH
Q 026418 68 AVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTV--NASIIHILKYLNGS-----AKT-Y--ANSVQAYVHVRDVALAH 137 (239)
Q Consensus 68 ~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~--~~~~~~~~~~~~~~-----~~~-~--~~~~~~~i~v~D~a~~~ 137 (239)
..+|.+++.++++.|++++++||+.+||+...... .....++..+..+. +.. + ++..++|+|++|+|+++
T Consensus 170 ~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~ 249 (347)
T 1orr_A 170 GAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLY 249 (347)
T ss_dssp HHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCCcceEeeEEHHHHHHHH
Confidence 99999999998888999999999999999754321 12334455555554 332 3 34567899999999999
Q ss_pred HHhhcC-CCCCc-eEEEec-C--CCCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcccChHHHHh-hCCce-eCHHHH
Q 026418 138 ILVYET-PSASG-RYLCAE-S--VLHRGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKD-LGLEF-TPVKQC 210 (239)
Q Consensus 138 ~~~~~~-~~~~~-~y~~~~-~--~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p-~~~~e~ 210 (239)
+.++.+ ....| +||+++ . ++|+.|+++.+.+.+ +.+.+....+..........+|++|+++ |||+| ++++++
T Consensus 250 ~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~-g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~ 328 (347)
T 1orr_A 250 FTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYC-NIDMRFTNLPVRESDQRVFVADIKKITNAIDWSPKVSAKDG 328 (347)
T ss_dssp HHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHH-TCCCCEEEECCCSSCCSEECBCCHHHHHHHCCCCCSCHHHH
T ss_pred HHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHh-CCCCCceeCCCCCCCcceeecCHHHHHHHHCCCccCCHHHH
Confidence 999975 22234 998884 3 499999999999997 4433322222222334567889999976 89999 899999
Q ss_pred HHHHHHHHHHc
Q 026418 211 LYETVKSLQEK 221 (239)
Q Consensus 211 i~~~~~~~~~~ 221 (239)
|+++++|++++
T Consensus 329 l~~~~~~~~~~ 339 (347)
T 1orr_A 329 VQKMYDWTSSI 339 (347)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHHH
Confidence 99999999865
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-29 Score=201.27 Aligned_cols=204 Identities=12% Similarity=0.049 Sum_probs=158.5
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+++|+.++.+++++|++.++ +|||+|| .++|+..... +++|+++ ..|.+.|+.+|..+|.+++.++
T Consensus 78 ~~~n~~~~~~l~~a~~~~~~-~~v~~SS-~~vy~~~~~~---~~~E~~~------~~p~~~Y~~sK~~~E~~~~~~~--- 143 (299)
T 1n2s_A 78 QLLNATSVEAIAKAANETGA-WVVHYST-DYVFPGTGDI---PWQETDA------TSPLNVYGKTKLAGEKALQDNC--- 143 (299)
T ss_dssp HHHHTHHHHHHHHHHTTTTC-EEEEEEE-GGGSCCCTTC---CBCTTSC------CCCSSHHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHHHHHcCC-cEEEEec-ccEEeCCCCC---CCCCCCC------CCCccHHHHHHHHHHHHHHHhC---
Confidence 56899999999999999987 8999999 5999876544 7888876 3567899999999999998764
Q ss_pred CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCc-cCCCCCCceehHHHHHHHHHhhcCC--C--CCceEEEe-cC
Q 026418 82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKT-YANSVQAYVHVRDVALAHILVYETP--S--ASGRYLCA-ES 155 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~D~a~~~~~~~~~~--~--~~~~y~~~-~~ 155 (239)
.+++++||+.+||++.. .....++..+..+..+. +++..++++|++|+|++++.++.++ . .+++||++ ++
T Consensus 144 -~~~~ilRp~~v~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~i~~~~ 219 (299)
T 1n2s_A 144 -PKHLIFRTSWVYAGKGN---NFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAGG 219 (299)
T ss_dssp -SSEEEEEECSEECSSSC---CHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCBS
T ss_pred -CCeEEEeeeeecCCCcC---cHHHHHHHHHhcCCCEEeecCcccCCeeHHHHHHHHHHHHHHhccccccCceEEEeCCC
Confidence 48999999999999753 23344556666676553 5677789999999999999999765 2 25599887 68
Q ss_pred CCCHHHHHHHHHHhCCCCC----------CCCCCCCCCCCCCCCcccChHHHHh-hCCceeCHHHHHHHHHHHHHHcCC
Q 026418 156 VLHRGEVVEILAKFFPEYP----------IPTKCSDEKNPRKKPYKFSNQKLKD-LGLEFTPVKQCLYETVKSLQEKGH 223 (239)
Q Consensus 156 ~~s~~el~~~i~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p~~~~e~i~~~~~~~~~~g~ 223 (239)
++|+.|+++.+.+.++... ++...............+|++|+++ |||+|.+++++|+++++|+++.+.
T Consensus 220 ~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~l~~~~~~~~~~~~ 298 (299)
T 1n2s_A 220 TTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFDLILPQWELGVKRMLTEMFTTTT 298 (299)
T ss_dssp CEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHHHTCCCCBHHHHHHHHHHHHHSCCC
T ss_pred CCCHHHHHHHHHHHhCCCccccccccccccccccccCcCCCCCceeeeHHHHHHhcCCCCCCHHHHHHHHHHHHHhcCC
Confidence 8999999999998862110 1110001112234568899999976 899998899999999999986653
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-28 Score=201.92 Aligned_cols=209 Identities=14% Similarity=0.020 Sum_probs=162.4
Q ss_pred chhHhHHHHHHHHHHHhcCC---CEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKV---RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA 78 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v---~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~ 78 (239)
+++|+.++.+++++|.+.++ ++|||+|| .++|+..... +++|+++. .|.+.|+.+|..+|.+++.++
T Consensus 126 ~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS-~~~~~~~~~~---~~~E~~~~------~~~~~Y~~sK~~~e~~~~~~~ 195 (375)
T 1t2a_A 126 ADVDGVGTLRLLDAVKTCGLINSVKFYQAST-SELYGKVQEI---PQKETTPF------YPRSPYGAAKLYAYWIVVNFR 195 (375)
T ss_dssp HHHHTHHHHHHHHHHHHTTCTTTCEEEEEEE-GGGTCSCSSS---SBCTTSCC------CCCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCccceEEEecc-hhhhCCCCCC---CCCccCCC------CCCChhHHHHHHHHHHHHHHH
Confidence 57899999999999999987 89999999 5999876544 78888763 457899999999999999998
Q ss_pred HHcCccEEEEecCcccCCCCCCCCC--hhHHHHHHHHcCCCC--ccC--CCCCCceehHHHHHHHHHhhcCCCCCceEEE
Q 026418 79 VARGVDLVVVNPVLVLGPLLQSTVN--ASIIHILKYLNGSAK--TYA--NSVQAYVHVRDVALAHILVYETPSASGRYLC 152 (239)
Q Consensus 79 ~~~~~~~~i~Rp~~v~G~~~~~~~~--~~~~~~~~~~~~~~~--~~~--~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~ 152 (239)
++.+++++++||+.+|||+...... .....+..+..|..+ .++ +..++|+|++|+|++++.+++++. .++||+
T Consensus 196 ~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~~-~~~~ni 274 (375)
T 1t2a_A 196 EAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDE-PEDFVI 274 (375)
T ss_dssp HHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHSSS-CCCEEE
T ss_pred HHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHHHHHHHHhcCC-CceEEE
Confidence 8889999999999999997543321 112344556667543 234 456899999999999999998654 368987
Q ss_pred e-cCCCCHHHHHHHHHHhCCCCCCC-------CC------------CCC--CCCCCCCCcccChHHHHh-hCCce-eCHH
Q 026418 153 A-ESVLHRGEVVEILAKFFPEYPIP-------TK------------CSD--EKNPRKKPYKFSNQKLKD-LGLEF-TPVK 208 (239)
Q Consensus 153 ~-~~~~s~~el~~~i~~~~~~~~~~-------~~------------~~~--~~~~~~~~~~~~~~k~~~-lg~~p-~~~~ 208 (239)
+ ++++|+.|+++.+.+.+ +.+.+ .+ ..+ ..........+|++|+++ |||+| ++++
T Consensus 275 ~~~~~~s~~e~~~~i~~~~-g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~ 353 (375)
T 1t2a_A 275 ATGEVHSVREFVEKSFLHI-GKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVAFD 353 (375)
T ss_dssp CCSCCEEHHHHHHHHHHHT-TCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCCHHHHHHHCCCCCSCHH
T ss_pred eCCCcccHHHHHHHHHHHh-CCCcccccccccccccccccccceeecCcccCCcccchhhcCCHHHHHHhcCCCccCCHH
Confidence 6 78899999999999997 43321 10 000 112233456789999976 99999 8999
Q ss_pred HHHHHHHHHHHHcC
Q 026418 209 QCLYETVKSLQEKG 222 (239)
Q Consensus 209 e~i~~~~~~~~~~g 222 (239)
++|+++++|+++..
T Consensus 354 e~l~~~~~~~~~~~ 367 (375)
T 1t2a_A 354 ELVREMVHADVELM 367 (375)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999998754
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-28 Score=201.02 Aligned_cols=209 Identities=14% Similarity=0.071 Sum_probs=161.7
Q ss_pred chhHhHHHHHHHHHHHhcCC---CEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKV---RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA 78 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v---~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~ 78 (239)
+++|+.++.+++++|++.++ ++|||+|| .++|+..... +++|+++. .|.+.|+.+|..+|.+++.++
T Consensus 102 ~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS-~~v~g~~~~~---~~~E~~~~------~~~~~Y~~sK~~~e~~~~~~~ 171 (372)
T 1db3_A 102 ADVDAMGTLRLLEAIRFLGLEKKTRFYQAST-SELYGLVQEI---PQKETTPF------YPRSPYAVAKLYAYWITVNYR 171 (372)
T ss_dssp HHHHTHHHHHHHHHHHHTTCTTTCEEEEEEE-GGGGTTCCSS---SBCTTSCC------CCCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCcEEEEeCC-hhhhCCCCCC---CCCccCCC------CCCChHHHHHHHHHHHHHHHH
Confidence 46899999999999999987 89999999 5999876543 78888763 457899999999999999998
Q ss_pred HHcCccEEEEecCcccCCCCCCCCC--hhHHHHHHHHcCCCC--ccC--CCCCCceehHHHHHHHHHhhcCCCCCceEEE
Q 026418 79 VARGVDLVVVNPVLVLGPLLQSTVN--ASIIHILKYLNGSAK--TYA--NSVQAYVHVRDVALAHILVYETPSASGRYLC 152 (239)
Q Consensus 79 ~~~~~~~~i~Rp~~v~G~~~~~~~~--~~~~~~~~~~~~~~~--~~~--~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~ 152 (239)
++.+++++++|++.+|||+...... .....+..+..|... .++ +..++|+|++|+|++++.++.++. .++||+
T Consensus 172 ~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~~-~~~~ni 250 (372)
T 1db3_A 172 ESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQEQ-PEDFVI 250 (372)
T ss_dssp HHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTSSSS-CCCEEE
T ss_pred HHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHHHHHHHHhcCC-CceEEE
Confidence 8889999999999999997543221 122344556667643 234 456899999999999999998654 368987
Q ss_pred e-cCCCCHHHHHHHHHHhCCCCCCC-------CC----------------------CCC--CCCCCCCCcccChHHHHh-
Q 026418 153 A-ESVLHRGEVVEILAKFFPEYPIP-------TK----------------------CSD--EKNPRKKPYKFSNQKLKD- 199 (239)
Q Consensus 153 ~-~~~~s~~el~~~i~~~~~~~~~~-------~~----------------------~~~--~~~~~~~~~~~~~~k~~~- 199 (239)
+ ++++|+.|+++.+.+.+ +.+.+ .+ ..+ ..........+|++|+++
T Consensus 251 ~~~~~~s~~e~~~~i~~~~-g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~ 329 (372)
T 1db3_A 251 ATGVQYSVRQFVEMAAAQL-GIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAEVETLLGDPTKAHEK 329 (372)
T ss_dssp CCCCCEEHHHHHHHHHHTT-TEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEECGGGCCCCC-CCCCBCCHHHHHH
T ss_pred cCCCceeHHHHHHHHHHHh-CCCcccccccccccccccccccccccccccccceeeccccccCCCchhhhccCHHHHHHH
Confidence 7 78899999999999987 33211 00 001 112233456789999976
Q ss_pred hCCce-eCHHHHHHHHHHHHHHcC
Q 026418 200 LGLEF-TPVKQCLYETVKSLQEKG 222 (239)
Q Consensus 200 lg~~p-~~~~e~i~~~~~~~~~~g 222 (239)
|||+| ++++++|+++++|+++..
T Consensus 330 lG~~p~~~l~e~l~~~~~~~~~~~ 353 (372)
T 1db3_A 330 LGWKPEITLREMVSEMVANDLEAA 353 (372)
T ss_dssp HCCCCCSCHHHHHHHHHHHHHHHH
T ss_pred hCCccccCHHHHHHHHHHHHHHhh
Confidence 99999 999999999999998664
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=8.3e-29 Score=202.18 Aligned_cols=211 Identities=18% Similarity=0.227 Sum_probs=160.9
Q ss_pred chhHhHHHHHHHHHHHhc--CCC-------EEEEccchhhhccCCCCC-------CCccccCCCCCChhhcccCCchHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA--KVR-------RVVFTSSIGAVYMDPNRS-------PDDVVDESCWSDLEFCKNTKNWYCY 65 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~--~v~-------~~i~~Ss~~~vy~~~~~~-------~~~~~~E~~~~~~~~~~~~~~~Y~~ 65 (239)
+++|+.++.+++++|.+. +++ +|||+|| .++||..... ...+++|+++ ..|.+.|+.
T Consensus 97 ~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS-~~v~g~~~~~~~~~~~~~~~~~~E~~~------~~~~~~Y~~ 169 (361)
T 1kew_A 97 IETNIVGTYALLEVARKYWSALGEDKKNNFRFHHIST-DEVYGDLPHPDEVENSVTLPLFTETTA------YAPSSPYSA 169 (361)
T ss_dssp HHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEE-GGGGCCCCCGGGSCTTSCCCCBCTTSC------CCCCSHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCC-HHHhCCCcccccccccccCCCCCCCCC------CCCCCccHH
Confidence 578999999999999998 887 9999999 4999764310 0014667665 356789999
Q ss_pred HHHHHHHHHHHHHHHcCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCc-cC--CCCCCceehHHHHHHHHHhhc
Q 026418 66 GKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKT-YA--NSVQAYVHVRDVALAHILVYE 142 (239)
Q Consensus 66 sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~i~v~D~a~~~~~~~~ 142 (239)
+|..+|.+++.++++.+++++++||+.+|||..... .....++..+..+..+. ++ ...++++|++|+|++++.++.
T Consensus 170 sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~ 248 (361)
T 1kew_A 170 SKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPE-KLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVT 248 (361)
T ss_dssp HHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT-SHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcc-cHHHHHHHHHHcCCCceEcCCCceeEeeEEHHHHHHHHHHHHh
Confidence 999999999999888899999999999999986432 23344566677776544 34 356789999999999999997
Q ss_pred CCCCCceEEEe-cCCCCHHHHHHHHHHhCCCCCCCCC--------CCCCCCCCCCCcccChHHHHh-hCCce-eCHHHHH
Q 026418 143 TPSASGRYLCA-ESVLHRGEVVEILAKFFPEYPIPTK--------CSDEKNPRKKPYKFSNQKLKD-LGLEF-TPVKQCL 211 (239)
Q Consensus 143 ~~~~~~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~k~~~-lg~~p-~~~~e~i 211 (239)
....+.+||++ +.++|+.|+++.+.+.+ +.+.+.. .............+|++|+++ |||+| ++++++|
T Consensus 249 ~~~~g~~~~v~~~~~~s~~e~~~~i~~~~-g~~~~~~~p~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l 327 (361)
T 1kew_A 249 EGKAGETYNIGGHNEKKNLDVVFTICDLL-DEIVPKATSYREQITYVADRPGHDRRYAIDAGKISRELGWKPLETFESGI 327 (361)
T ss_dssp HCCTTCEEEECCCCEEEHHHHHHHHHHHH-HHHSCCSSCGGGGEEEECCCTTCCCBCCBCCHHHHHHHCCCCSCCHHHHH
T ss_pred CCCCCCEEEecCCCeeeHHHHHHHHHHHh-CCcCccccccccceeecCCCCcccceeecCHHHHHHHhCCCCccCHHHHH
Confidence 65544599887 57799999999999886 2221110 011112223456889999976 99999 8999999
Q ss_pred HHHHHHHHHc
Q 026418 212 YETVKSLQEK 221 (239)
Q Consensus 212 ~~~~~~~~~~ 221 (239)
+++++|++++
T Consensus 328 ~~~~~~~~~~ 337 (361)
T 1kew_A 328 RKTVEWYLAN 337 (361)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhc
Confidence 9999999875
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-28 Score=194.82 Aligned_cols=197 Identities=18% Similarity=0.102 Sum_probs=155.0
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+++|+.++.+++++|++.++ +|||+|| .++|+..... +++|+++. .|.+.|+.+|..+|.+++.++
T Consensus 87 ~~~nv~~~~~l~~a~~~~~~-~iv~~SS-~~v~~~~~~~---~~~E~~~~------~~~~~Y~~sK~~~E~~~~~~~--- 152 (292)
T 1vl0_A 87 YKINAIGPKNLAAAAYSVGA-EIVQIST-DYVFDGEAKE---PITEFDEV------NPQSAYGKTKLEGENFVKALN--- 152 (292)
T ss_dssp HHHHTHHHHHHHHHHHHHTC-EEEEEEE-GGGSCSCCSS---CBCTTSCC------CCCSHHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHHHHHcCC-eEEEech-HHeECCCCCC---CCCCCCCC------CCccHHHHHHHHHHHHHHhhC---
Confidence 57899999999999999998 9999999 4999876544 78888763 567899999999999998763
Q ss_pred CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCc-cCCCCCCceehHHHHHHHHHhhcCCCCCceEEEe-cCCCCH
Q 026418 82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKT-YANSVQAYVHVRDVALAHILVYETPSASGRYLCA-ESVLHR 159 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~ 159 (239)
.+++++||+.+||+ .. .....++..+..+..+. .++..++++|++|+|++++.++..+ .+++||++ ++++|+
T Consensus 153 -~~~~~lR~~~v~G~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~-~~~~~~i~~~~~~s~ 226 (292)
T 1vl0_A 153 -PKYYIVRTAWLYGD-GN---NFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEK-NYGTFHCTCKGICSW 226 (292)
T ss_dssp -SSEEEEEECSEESS-SS---CHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHT-CCEEEECCCBSCEEH
T ss_pred -CCeEEEeeeeeeCC-Cc---ChHHHHHHHHhcCCcEEeecCeeeCCccHHHHHHHHHHHHhcC-CCcEEEecCCCCccH
Confidence 47999999999999 22 23334455566666543 4667789999999999999999866 55599887 688999
Q ss_pred HHHHHHHHHhCCCCCC-----CCCCCCCCCCCCCCcccChHHHHh-hCCceeCHHHHHHHHHHHHH
Q 026418 160 GEVVEILAKFFPEYPI-----PTKCSDEKNPRKKPYKFSNQKLKD-LGLEFTPVKQCLYETVKSLQ 219 (239)
Q Consensus 160 ~el~~~i~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p~~~~e~i~~~~~~~~ 219 (239)
.|+++.+.+.+ +.+. +...............+|++|+++ |||+|.+++++|+++++|++
T Consensus 227 ~e~~~~i~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~l~~~~~~~~ 291 (292)
T 1vl0_A 227 YDFAVEIFRLT-GIDVKVTPCTTEEFPRPAKRPKYSVLRNYMLELTTGDITREWKESLKEYIDLLQ 291 (292)
T ss_dssp HHHHHHHHHHH-CCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHTTCCCCCBHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHh-CCCCceeeccccccCcccCCCccccccHHHHHHHcCCCCCCHHHHHHHHHHHhc
Confidence 99999999987 3332 211111112234568899999987 89999999999999999985
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-28 Score=197.82 Aligned_cols=206 Identities=19% Similarity=0.170 Sum_probs=151.3
Q ss_pred CchhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHH
Q 026418 1 MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA 80 (239)
Q Consensus 1 ~~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 80 (239)
++++|+.++.+++++|.+.++ +|||+||. ++|+. ... +++|+++. .|.+.|+.+|..+|.+++.+
T Consensus 83 ~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~-~v~~~-~~~---~~~E~~~~------~~~~~Y~~sK~~~e~~~~~~--- 147 (315)
T 2ydy_A 83 ASQLNVDASGNLAKEAAAVGA-FLIYISSD-YVFDG-TNP---PYREEDIP------APLNLYGKTKLDGEKAVLEN--- 147 (315)
T ss_dssp -----CHHHHHHHHHHHHHTC-EEEEEEEG-GGSCS-SSC---SBCTTSCC------CCCSHHHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHHHHHcCC-eEEEEchH-HHcCC-CCC---CCCCCCCC------CCcCHHHHHHHHHHHHHHHh---
Confidence 357899999999999999987 99999994 88976 333 78888763 46789999999999999776
Q ss_pred cCccEEEEecCcccCCCCCCCCChhHHHHHHHH-cCCCCc-cCCCCCCceehHHHHHHHHHhhcCC----CCCceEEEe-
Q 026418 81 RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYL-NGSAKT-YANSVQAYVHVRDVALAHILVYETP----SASGRYLCA- 153 (239)
Q Consensus 81 ~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~i~v~D~a~~~~~~~~~~----~~~~~y~~~- 153 (239)
+++++++||+.+||+...........++..+. .+..+. .++..++++|++|+|++++.++.+. ..+++||++
T Consensus 148 -~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~i~~ 226 (315)
T 2ydy_A 148 -NLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRMLDPSIKGTFHWSG 226 (315)
T ss_dssp -CTTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEECSSBBCCEEHHHHHHHHHHHHHHHHTCTTCCEEEECCC
T ss_pred -CCCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeeccCceECcEEHHHHHHHHHHHHHhhccccCCCCeEEEcC
Confidence 57889999999999976521122223345555 555443 3567789999999999999988653 344599887
Q ss_pred cCCCCHHHHHHHHHHhCCCCCCC----CCC-CCCCCCCCCCcccChHHHHhhCCce-eCHHHHHHHHHHHHHHcCC
Q 026418 154 ESVLHRGEVVEILAKFFPEYPIP----TKC-SDEKNPRKKPYKFSNQKLKDLGLEF-TPVKQCLYETVKSLQEKGH 223 (239)
Q Consensus 154 ~~~~s~~el~~~i~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~k~~~lg~~p-~~~~e~i~~~~~~~~~~g~ 223 (239)
++++|+.|+++.+.+.+ +.+.+ ... ............+|++|++++||+| ++++++|+++++|++++..
T Consensus 227 ~~~~s~~e~~~~i~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~G~~p~~~~~~~l~~~~~~~~~~~~ 301 (315)
T 2ydy_A 227 NEQMTKYEMACAIADAF-NLPSSHLRPITDSPVLGAQRPRNAQLDCSKLETLGIGQRTPFRIGIKESLWPFLIDKR 301 (315)
T ss_dssp SCCBCHHHHHHHHHHHT-TCCCTTEEEECSCCCSSSCCCSBCCBCCHHHHHTTCCCCCCHHHHHHHHHGGGCC---
T ss_pred CCcccHHHHHHHHHHHh-CCChhheeccccccccccCCCcccccchHHHHhcCCCCCCCHHHHHHHHHHHHccchh
Confidence 68999999999999997 43322 110 1101223456789999998779998 9999999999999976643
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.7e-28 Score=196.16 Aligned_cols=206 Identities=17% Similarity=0.164 Sum_probs=159.9
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+++|+.++.+++++|.+.++++|||+||. ++|+..... ..+++|++ .|.+.|+.+|..+|.+++.+
T Consensus 109 ~~~N~~~~~~l~~a~~~~~~~~iV~~SS~-~~~~~~~~~-~~~~~E~~--------~~~~~Y~~sK~~~e~~~~~~---- 174 (330)
T 2pzm_A 109 AATNVQGSINVAKAASKAGVKRLLNFQTA-LCYGRPATV-PIPIDSPT--------APFTSYGISKTAGEAFLMMS---- 174 (330)
T ss_dssp HHHHTHHHHHHHHHHHHHTCSEEEEEEEG-GGGCSCSSS-SBCTTCCC--------CCCSHHHHHHHHHHHHHHTC----
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEecCH-HHhCCCccC-CCCcCCCC--------CCCChHHHHHHHHHHHHHHc----
Confidence 46899999999999999999999999995 889764321 11566764 25789999999999998765
Q ss_pred CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCC-CCCceehHHHHH-HHHHhhcCCCCCceEEEe-cCCCC
Q 026418 82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANS-VQAYVHVRDVAL-AHILVYETPSASGRYLCA-ESVLH 158 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~v~D~a~-~~~~~~~~~~~~~~y~~~-~~~~s 158 (239)
+++++++||+++|||+.. ......++..+..+. ..++++ .++++|++|+|+ +++.++..+. +++|+++ +.++|
T Consensus 175 ~~~~~~iR~~~v~gp~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~Dva~~a~~~~~~~~~-g~~~~v~~~~~~s 250 (330)
T 2pzm_A 175 DVPVVSLRLANVTGPRLA--IGPIPTFYKRLKAGQ-KCFCSDTVRDFLDMSDFLAIADLSLQEGRP-TGVFNVSTGEGHS 250 (330)
T ss_dssp SSCEEEEEECEEECTTCC--SSHHHHHHHHHHTTC-CCCEESCEECEEEHHHHHHHHHHHTSTTCC-CEEEEESCSCCEE
T ss_pred CCCEEEEeeeeeECcCCC--CCHHHHHHHHHHcCC-EEeCCCCEecceeHHHHHHHHHHHHhhcCC-CCEEEeCCCCCCC
Confidence 899999999999999852 223334456666666 444433 678999999999 9999998765 5599887 68899
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcccChHHH-----HhhCCce-eCHHHHHHHHHHHHHHcCCCCCCc
Q 026418 159 RGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKL-----KDLGLEF-TPVKQCLYETVKSLQEKGHLPIPT 228 (239)
Q Consensus 159 ~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~-----~~lg~~p-~~~~e~i~~~~~~~~~~g~~~~~~ 228 (239)
+.|+++.+.+.+ +.+ +....+... ......+|++|+ ++|||+| ++++++|+++++|+++.|.+..-.
T Consensus 251 ~~e~~~~i~~~~-g~~-~~~~~~~~~-~~~~~~~d~~k~~~~~l~~lG~~p~~~~~~~l~~~~~~~~~~~~~~~~~ 323 (330)
T 2pzm_A 251 IKEVFDVVLDYV-GAT-LAEPVPVVA-PGADDVPSVVLDPSKTETEFGWKAKVDFKDTITGQLAWYDKYGVTDIFS 323 (330)
T ss_dssp HHHHHHHHHHHH-TCC-CSSCCCEEC-CCTTSCSEECBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCSCSCCC
T ss_pred HHHHHHHHHHHh-CCC-CceeCCCCc-chhhccCCHHHHhhchHHHcCCcccCCHHHHHHHHHHHHHhhCcccccC
Confidence 999999999987 433 333222212 345677888887 7799999 999999999999999999886543
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-27 Score=193.21 Aligned_cols=208 Identities=14% Similarity=0.060 Sum_probs=160.4
Q ss_pred chhHhHHHHHHHHHHHhcCC-CEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKV-RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA 80 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v-~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 80 (239)
+++|+.++.+++++|.+.++ ++|||+|| .++||..... +++|+++ ..|.+.|+.+|..+|.+++.++.+
T Consensus 99 ~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS-~~vyg~~~~~---~~~e~~~------~~~~~~Y~~sK~~~e~~~~~~~~~ 168 (345)
T 2z1m_A 99 AEVDAIGVLRILEALRTVKPDTKFYQAST-SEMFGKVQEI---PQTEKTP------FYPRSPYAVAKLFGHWITVNYREA 168 (345)
T ss_dssp HHHHTHHHHHHHHHHHHHCTTCEEEEEEE-GGGGCSCSSS---SBCTTSC------CCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCceEEEEec-hhhcCCCCCC---CCCccCC------CCCCChhHHHHHHHHHHHHHHHHH
Confidence 57899999999999999886 89999999 5999876654 6788765 356789999999999999999888
Q ss_pred cCccEEEEecCcccCCCCCCCCCh--hHHHHHHHHcCCCCc--cC--CCCCCceehHHHHHHHHHhhcCCCCCceEEEe-
Q 026418 81 RGVDLVVVNPVLVLGPLLQSTVNA--SIIHILKYLNGSAKT--YA--NSVQAYVHVRDVALAHILVYETPSASGRYLCA- 153 (239)
Q Consensus 81 ~~~~~~i~Rp~~v~G~~~~~~~~~--~~~~~~~~~~~~~~~--~~--~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~- 153 (239)
.+++++++|++++|||+....... ....+.++..+.... ++ ...++++|++|+|++++.++.++. .++||++
T Consensus 169 ~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~~~~-~~~~~i~~ 247 (345)
T 2z1m_A 169 YNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQQPE-PDDYVIAT 247 (345)
T ss_dssp HCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHHTSSS-CCCEEECC
T ss_pred hCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHHhCCC-CceEEEeC
Confidence 899999999999999985432211 112344555665432 34 346789999999999999998654 3689876
Q ss_pred cCCCCHHHHHHHHHHhCCCCCCCCC-------------------CCC--CCCCCCCCcccChHHHHh-hCCce-eCHHHH
Q 026418 154 ESVLHRGEVVEILAKFFPEYPIPTK-------------------CSD--EKNPRKKPYKFSNQKLKD-LGLEF-TPVKQC 210 (239)
Q Consensus 154 ~~~~s~~el~~~i~~~~~~~~~~~~-------------------~~~--~~~~~~~~~~~~~~k~~~-lg~~p-~~~~e~ 210 (239)
++++|+.|+++.+.+.+ +.+.+.. ..+ ..........+|++|+++ |||+| ++++++
T Consensus 248 ~~~~s~~e~~~~i~~~~-g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~ 326 (345)
T 2z1m_A 248 GETHTVREFVEKAAKIA-GFDIEWVGEGINEKGIDRNTGKVIVEVSEEFFRPAEVDILVGNPEKAMKKLGWKPRTTFDEL 326 (345)
T ss_dssp SCCEEHHHHHHHHHHHT-TCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCCHHHHHHHCCCCCSCHHHH
T ss_pred CCCccHHHHHHHHHHHh-CCCccccccccccccccccccccccccCcccCCCCCcceeecCHHHHHHHcCCcccCCHHHH
Confidence 78899999999999997 4332110 000 112233456789999976 99999 899999
Q ss_pred HHHHHHHHHHc
Q 026418 211 LYETVKSLQEK 221 (239)
Q Consensus 211 i~~~~~~~~~~ 221 (239)
|+++++|+++.
T Consensus 327 l~~~~~~~~~~ 337 (345)
T 2z1m_A 327 VEIMMEADLKR 337 (345)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999865
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.96 E-value=5e-28 Score=211.83 Aligned_cols=218 Identities=17% Similarity=0.198 Sum_probs=165.1
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhc-ccCCchHHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFC-KNTKNWYCYGKAVAEKAAWEEAVA 80 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~-~~~~~~Y~~sK~~~E~~~~~~~~~ 80 (239)
+++|+.++.+++++|++.+ ++|||+|| .++|+..... +++|+++.....+ ..|.+.|+.+|.++|.+++.++++
T Consensus 406 ~~~Nv~gt~~ll~aa~~~~-~r~V~~SS-~~vyg~~~~~---~~~E~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~ 480 (660)
T 1z7e_A 406 FELDFEENLRIIRYCVKYR-KRIIFPST-SEVYGMCSDK---YFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEK 480 (660)
T ss_dssp HHHHTHHHHHHHHHHHHTT-CEEEEECC-GGGGBTCCSS---SBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhhHHHHHHHHHHHHhC-CEEEEEec-HHHcCCCCCc---ccCCCccccccCcccCCCCCcHHHHHHHHHHHHHHHHH
Confidence 4689999999999999999 89999999 5999876544 6888875322111 145678999999999999999888
Q ss_pred cCccEEEEecCcccCCCCCC-------CCChhHHHHHHHHcCCCCc-c--CCCCCCceehHHHHHHHHHhhcCCC---CC
Q 026418 81 RGVDLVVVNPVLVLGPLLQS-------TVNASIIHILKYLNGSAKT-Y--ANSVQAYVHVRDVALAHILVYETPS---AS 147 (239)
Q Consensus 81 ~~~~~~i~Rp~~v~G~~~~~-------~~~~~~~~~~~~~~~~~~~-~--~~~~~~~i~v~D~a~~~~~~~~~~~---~~ 147 (239)
.|++++++||+++||+.... .......++..+..+.++. + ++..++|+|++|+|++++.++..+. .+
T Consensus 481 ~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~g 560 (660)
T 1z7e_A 481 EGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDG 560 (660)
T ss_dssp HCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTT
T ss_pred cCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHHHHHHHHHhCccccCCC
Confidence 89999999999999997642 1223345566777777654 3 3466889999999999999998654 23
Q ss_pred ceEEEe-cC-CCCHHHHHHHHHHhCCCC----CCCCCCC----------CCCCCCCCCcccChHHHHh-hCCce-eCHHH
Q 026418 148 GRYLCA-ES-VLHRGEVVEILAKFFPEY----PIPTKCS----------DEKNPRKKPYKFSNQKLKD-LGLEF-TPVKQ 209 (239)
Q Consensus 148 ~~y~~~-~~-~~s~~el~~~i~~~~~~~----~~~~~~~----------~~~~~~~~~~~~~~~k~~~-lg~~p-~~~~e 209 (239)
++||++ ++ ++|+.|+++.+.+.++.. .+|.... ...........+|++|+++ |||+| +++++
T Consensus 561 ~~~ni~~~~~~~s~~el~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~~l~e 640 (660)
T 1z7e_A 561 EIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQE 640 (660)
T ss_dssp EEEEECCGGGEEEHHHHHHHHHHHHHHCTTGGGSCCCCCEEEECTHHHHCTTCCCCSCCCBCCHHHHHHHCCCCCCCHHH
T ss_pred eEEEECCCCCCcCHHHHHHHHHHHhcCCCcccccCccccccchhccccccccccchhhcccCHHHHHHhcCCCccCcHHH
Confidence 489888 44 799999999999886321 1221110 0011223567889999976 99999 99999
Q ss_pred HHHHHHHHHHHcCCC
Q 026418 210 CLYETVKSLQEKGHL 224 (239)
Q Consensus 210 ~i~~~~~~~~~~g~~ 224 (239)
+|+++++|++++..+
T Consensus 641 gl~~~i~~~~~~~~~ 655 (660)
T 1z7e_A 641 TIDETLDFFLRTVDL 655 (660)
T ss_dssp HHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHhhccc
Confidence 999999999877654
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-27 Score=193.33 Aligned_cols=207 Identities=19% Similarity=0.218 Sum_probs=155.5
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCC-chHHHHHHHHHHHHHH-HHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK-NWYCYGKAVAEKAAWE-EAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~-~~Y~~sK~~~E~~~~~-~~~ 79 (239)
+++|+.++.+++++|.+.++++|||+|| .++|+.....+..+++|++ .|. +.|+.+|.++|.+++. ++
T Consensus 110 ~~~N~~~~~~l~~a~~~~~~~~iV~~SS-~~~~g~~~~~~~~~~~E~~--------~p~~~~Y~~sK~~~E~~~~~s~~- 179 (333)
T 2q1w_A 110 TLTNCVGGSNVVQAAKKNNVGRFVYFQT-ALCYGVKPIQQPVRLDHPR--------NPANSSYAISKSANEDYLEYSGL- 179 (333)
T ss_dssp HHHHTHHHHHHHHHHHHTTCSEEEEEEE-GGGGCSCCCSSSBCTTSCC--------CCTTCHHHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEECc-HHHhCCCcccCCCCcCCCC--------CCCCCchHHHHHHHHHHHHhhhC-
Confidence 4689999999999999999999999999 5899722111011567764 245 8899999999999977 53
Q ss_pred HcCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCcc-CCCCCCceehHHHHHHHHHhhcCCCCCceEEEe-cCCC
Q 026418 80 ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY-ANSVQAYVHVRDVALAHILVYETPSASGRYLCA-ESVL 157 (239)
Q Consensus 80 ~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~ 157 (239)
+++++||+++|||+.. ......++..+..+. ..+ ++..++++|++|+|++++.++..+. +++||++ +..+
T Consensus 180 ----~~~ilR~~~v~gp~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~i~v~Dva~ai~~~~~~~~-g~~~~v~~~~~~ 251 (333)
T 2q1w_A 180 ----DFVTFRLANVVGPRNV--SGPLPIFFQRLSEGK-KCFVTKARRDFVFVKDLARATVRAVDGVG-HGAYHFSSGTDV 251 (333)
T ss_dssp ----CEEEEEESEEESTTCC--SSHHHHHHHHHHTTC-CCEEEECEECEEEHHHHHHHHHHHHTTCC-CEEEECSCSCCE
T ss_pred ----CeEEEeeceEECcCCc--CcHHHHHHHHHHcCC-eeeCCCceEeeEEHHHHHHHHHHHHhcCC-CCEEEeCCCCCc
Confidence 8999999999999832 233344556666666 334 3556789999999999999998766 5599887 6889
Q ss_pred CHHHHHHHHHHhCCCCCCCCCCCCC----CCCCCCCcccChHHHHhhCCce-eCHHHHHHHHHHHHHHcCCCCCCc
Q 026418 158 HRGEVVEILAKFFPEYPIPTKCSDE----KNPRKKPYKFSNQKLKDLGLEF-TPVKQCLYETVKSLQEKGHLPIPT 228 (239)
Q Consensus 158 s~~el~~~i~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~k~~~lg~~p-~~~~e~i~~~~~~~~~~g~~~~~~ 228 (239)
|+.|+++.+.+.+ +.+ +....+. .........+|++|++++||+| ++++++|+++++|+++.|.++...
T Consensus 252 s~~e~~~~i~~~~-g~~-~~~~~~~~~~~~~~~~~~~~~d~~k~~~~G~~p~~~~~~~l~~~~~~~~~~~~~~~~~ 325 (333)
T 2q1w_A 252 AIKELYDAVVEAM-ALP-SYPEPEIRELGPDDAPSILLDPSRTIQDFGKIEFTPLKETVAAAVAYFREYGVSGGYT 325 (333)
T ss_dssp EHHHHHHHHHHHT-TCS-SCCCCEEEECCTTSCCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC-----
T ss_pred cHHHHHHHHHHHh-CCC-CceeCCCCCcccccccccccCCHHHHHhcCCCcCCCHHHHHHHHHHHHHHHCCCCCCc
Confidence 9999999999997 433 2222111 1112256889999998779999 999999999999999999876643
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.96 E-value=5e-28 Score=191.53 Aligned_cols=189 Identities=19% Similarity=0.182 Sum_probs=148.7
Q ss_pred HHHHHHHHHHHh--cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHcCcc
Q 026418 7 IGTKNVIVAAAE--AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVARGVD 84 (239)
Q Consensus 7 ~~t~~ll~a~~~--~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~ 84 (239)
..+.+++++|++ .++++|||+|| .++|+..... +++|+++. .|.+.|+.+|..+|++++.+ .+++
T Consensus 79 ~~~~~l~~a~~~~~~~~~~~v~~Ss-~~vyg~~~~~---~~~E~~~~------~p~~~Y~~sK~~~E~~~~~~---~~~~ 145 (286)
T 3ius_A 79 PVLAALGDQIAARAAQFRWVGYLST-TAVYGDHDGA---WVDETTPL------TPTAARGRWRVMAEQQWQAV---PNLP 145 (286)
T ss_dssp HHHHHHHHHHHHTGGGCSEEEEEEE-GGGGCCCTTC---EECTTSCC------CCCSHHHHHHHHHHHHHHHS---TTCC
T ss_pred HHHHHHHHHHHhhcCCceEEEEeec-ceecCCCCCC---CcCCCCCC------CCCCHHHHHHHHHHHHHHhh---cCCC
Confidence 357899999999 67999999999 5999877655 78998873 56789999999999999877 5899
Q ss_pred EEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCcc--CCCCCCceehHHHHHHHHHhhcCCCCCceEEEe-cCCCCHHH
Q 026418 85 LVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY--ANSVQAYVHVRDVALAHILVYETPSASGRYLCA-ESVLHRGE 161 (239)
Q Consensus 85 ~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~~e 161 (239)
++++||+.+||++... +..+..+....+ ++..++|+|++|+|++++.++.++..+++||++ ++++|+.|
T Consensus 146 ~~ilRp~~v~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~g~~~~i~~~~~~s~~e 217 (286)
T 3ius_A 146 LHVFRLAGIYGPGRGP--------FSKLGKGGIRRIIKPGQVFSRIHVEDIAQVLAASMARPDPGAVYNVCDDEPVPPQD 217 (286)
T ss_dssp EEEEEECEEEBTTBSS--------STTSSSSCCCEEECTTCCBCEEEHHHHHHHHHHHHHSCCTTCEEEECCSCCBCHHH
T ss_pred EEEEeccceECCCchH--------HHHHhcCCccccCCCCcccceEEHHHHHHHHHHHHhCCCCCCEEEEeCCCCccHHH
Confidence 9999999999997543 234455665443 345789999999999999999987765699887 78899999
Q ss_pred HHHHHHHhCCCCCCCCCCCC--CCCC------CCCCcccChHHHHh-hCCce-e-CHHHHHHHHHHH
Q 026418 162 VVEILAKFFPEYPIPTKCSD--EKNP------RKKPYKFSNQKLKD-LGLEF-T-PVKQCLYETVKS 217 (239)
Q Consensus 162 l~~~i~~~~~~~~~~~~~~~--~~~~------~~~~~~~~~~k~~~-lg~~p-~-~~~e~i~~~~~~ 217 (239)
+++.+.+.+ +.+.+..... .... ......+|++|+++ |||+| + +++++|+++++.
T Consensus 218 ~~~~i~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~p~~~e~l~~~~~~ 283 (286)
T 3ius_A 218 VIAYAAELQ-GLPLPPAVDFDKADLTPMARSFYSENKRVRNDRIKEELGVRLKYPNYRVGLEALQAD 283 (286)
T ss_dssp HHHHHHHHH-TCCCCCEEEGGGSCCCHHHHHTTSCCCEECCHHHHHTTCCCCSCSSHHHHHHHHHHT
T ss_pred HHHHHHHHc-CCCCCcccchhhhccChhHHHhhcCCceeehHHHHHHhCCCCCcCCHHHHHHHHHHh
Confidence 999999997 4443322111 0111 12567889999987 89999 6 799999999763
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-27 Score=196.88 Aligned_cols=207 Identities=12% Similarity=0.040 Sum_probs=159.5
Q ss_pred chhHhHHHHHHHHHHHhcCCC-----EEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKVR-----RVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~-----~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++.+|+++|.+.+++ +|||+|| .++|+.... +++|+++ ..|.+.|+.+|..+|.+++.
T Consensus 130 ~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS-~~vyg~~~~----~~~E~~~------~~~~~~Y~~sK~~~E~~~~~ 198 (381)
T 1n7h_A 130 ADVVATGALRLLEAVRSHTIDSGRTVKYYQAGS-SEMFGSTPP----PQSETTP------FHPRSPYAASKCAAHWYTVN 198 (381)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEE-GGGGTTSCS----SBCTTSC------CCCCSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCccCCccEEEEeCc-HHHhCCCCC----CCCCCCC------CCCCCchHHHHHHHHHHHHH
Confidence 578999999999999998766 9999999 599986543 6788765 35678999999999999999
Q ss_pred HHHHcCccEEEEecCcccCCCCCCCCC--hhHHHHHHHHcCCCCc--cC--CCCCCceehHHHHHHHHHhhcCCCCCceE
Q 026418 77 EAVARGVDLVVVNPVLVLGPLLQSTVN--ASIIHILKYLNGSAKT--YA--NSVQAYVHVRDVALAHILVYETPSASGRY 150 (239)
Q Consensus 77 ~~~~~~~~~~i~Rp~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~--~~--~~~~~~i~v~D~a~~~~~~~~~~~~~~~y 150 (239)
++...+++++++|++++|||+...... .....+..+..+.... ++ +..++|+|++|+|++++.++.++. .++|
T Consensus 199 ~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~-~~~~ 277 (381)
T 1n7h_A 199 YREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQEK-PDDY 277 (381)
T ss_dssp HHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTSSS-CCEE
T ss_pred HHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHHHHHHHHHhCCC-CCeE
Confidence 988889999999999999998643321 1123345556665432 34 456789999999999999998654 3689
Q ss_pred EEe-cCCCCHHHHHHHHHHhCCCCCCC--CCCCC--CCCCCCCCcccChHHHHh-hCCce-eCHHHHHHHHHHHHHHc
Q 026418 151 LCA-ESVLHRGEVVEILAKFFPEYPIP--TKCSD--EKNPRKKPYKFSNQKLKD-LGLEF-TPVKQCLYETVKSLQEK 221 (239)
Q Consensus 151 ~~~-~~~~s~~el~~~i~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~k~~~-lg~~p-~~~~e~i~~~~~~~~~~ 221 (239)
|++ ++++|+.|+++.+.+.++ .+.+ ....+ ..........+|++|+++ |||+| ++++++|+++++|+++.
T Consensus 278 ~i~~~~~~s~~e~~~~i~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 354 (381)
T 1n7h_A 278 VVATEEGHTVEEFLDVSFGYLG-LNWKDYVEIDQRYFRPAEVDNLQGDASKAKEVLGWKPQVGFEKLVKMMVDEDLEL 354 (381)
T ss_dssp EECCSCEEEHHHHHHHHHHHTT-CCGGGTEEECGGGSCSSCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred EeeCCCCCcHHHHHHHHHHHcC-CCcccccccCcccCCccccccccCCHHHHHHhcCCcccCCHHHHHHHHHHHHHhh
Confidence 877 678999999999999973 3211 01111 112233456789999976 89999 99999999999999764
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=2.9e-27 Score=208.34 Aligned_cols=214 Identities=17% Similarity=0.159 Sum_probs=156.8
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCC-CCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRS-PDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA 80 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~-~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 80 (239)
+++|+.++.+|+++|++.++++|||+|| .++|+..... ...+++|+++ ..|.+.|+.+|.++|.+++.++++
T Consensus 108 ~~~Nv~gt~~ll~a~~~~~~~~iV~~SS-~~vyg~~~~~~~~~~~~E~~~------~~p~~~Y~~sK~~~E~~~~~~~~~ 180 (699)
T 1z45_A 108 YHNNILGTVVLLELMQQYNVSKFVFSSS-ATVYGDATRFPNMIPIPEECP------LGPTNPYGHTKYAIENILNDLYNS 180 (699)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEEEEE-GGGGCCGGGSTTCCSBCTTSC------CCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEECc-HHHhCCCccccccCCccccCC------CCCCChHHHHHHHHHHHHHHHHHh
Confidence 5789999999999999999999999999 5999764321 1125677765 346789999999999999998776
Q ss_pred --cCccEEEEecCcccCCCCCC----C----CChhHHHHHHHHcC--CCC-ccC--------CCCCCceehHHHHHHHHH
Q 026418 81 --RGVDLVVVNPVLVLGPLLQS----T----VNASIIHILKYLNG--SAK-TYA--------NSVQAYVHVRDVALAHIL 139 (239)
Q Consensus 81 --~~~~~~i~Rp~~v~G~~~~~----~----~~~~~~~~~~~~~~--~~~-~~~--------~~~~~~i~v~D~a~~~~~ 139 (239)
.+++++++||+++||+.... . .......+.....+ .++ .++ +..++|||++|+|++++.
T Consensus 181 ~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~ 260 (699)
T 1z45_A 181 DKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHVVDLAKGHIA 260 (699)
T ss_dssp STTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEEHHHHHHHHHH
T ss_pred ccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCCCCeeEeeEEHHHHHHHHHH
Confidence 68999999999999985321 0 11222344444443 232 233 346789999999999999
Q ss_pred hhcCC------CC-CceEEEe-cCCCCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcccChHHHHh-hCCce-eCHHH
Q 026418 140 VYETP------SA-SGRYLCA-ESVLHRGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKD-LGLEF-TPVKQ 209 (239)
Q Consensus 140 ~~~~~------~~-~~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p-~~~~e 209 (239)
++.+. .. .++||++ ++.+|+.|+++.+.+.+ +.+++....+..........+|++|+++ |||+| +++++
T Consensus 261 a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~-g~~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~~l~e 339 (699)
T 1z45_A 261 ALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKAS-GIDLPYKVTGRRAGDVLNLTAKPDRAKRELKWQTELQVED 339 (699)
T ss_dssp HHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHH-TCCCCC---------CCCCCBCCHHHHHHTCCCCCCCHHH
T ss_pred HHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHh-CCCCCceecCCCCCccccccCCHHHHHHhcCCCCCCCHHH
Confidence 88642 12 2389886 78899999999999986 5555544333233345568899999976 99999 99999
Q ss_pred HHHHHHHHHHHcCC
Q 026418 210 CLYETVKSLQEKGH 223 (239)
Q Consensus 210 ~i~~~~~~~~~~g~ 223 (239)
+|+++++|+++++.
T Consensus 340 gl~~~~~w~~~~~~ 353 (699)
T 1z45_A 340 SCKDLWKWTTENPF 353 (699)
T ss_dssp HHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHhCCc
Confidence 99999999988754
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.7e-27 Score=193.03 Aligned_cols=211 Identities=17% Similarity=0.067 Sum_probs=158.2
Q ss_pred chhHhHHHHHHHHHHHhcC-----CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK-----VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~-----v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++.+++++|++.+ +++|||+||. ++|+..... +++|+++. .|.+.|+.+|.++|.+++.
T Consensus 109 ~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~-~~~~~~~~~---~~~E~~~~------~~~~~Y~~sK~~~e~~~~~ 178 (342)
T 2hrz_A 109 YRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSI-AVFGAPLPY---PIPDEFHT------TPLTSYGTQKAICELLLSD 178 (342)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEG-GGCCSSCCS---SBCTTCCC------CCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcccccCCCcEEEEeCch-HhhCCCCCC---CcCCCCCC------CCcchHHHHHHHHHHHHHH
Confidence 5789999999999999876 8999999995 999865433 78888763 4678999999999999999
Q ss_pred HHHHcCccEEEEecCcccC-CCCCCCC--ChhHHHHHHHHcCCCCcc---CCCCCCceehHHHHHHHHHhhcCCC----C
Q 026418 77 EAVARGVDLVVVNPVLVLG-PLLQSTV--NASIIHILKYLNGSAKTY---ANSVQAYVHVRDVALAHILVYETPS----A 146 (239)
Q Consensus 77 ~~~~~~~~~~i~Rp~~v~G-~~~~~~~--~~~~~~~~~~~~~~~~~~---~~~~~~~i~v~D~a~~~~~~~~~~~----~ 146 (239)
+++..+++.+++|++.+|| |+..... .....++.....+..... ++...+++|++|+|++++.++..+. .
T Consensus 179 ~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~~~~~~~~~~~~~~~~ 258 (342)
T 2hrz_A 179 YSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSAVGFLIHGAMIDVEKVGP 258 (342)
T ss_dssp HHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHHHHHHHHHHHHHSCHHHHCS
T ss_pred HHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeEehHHHHHHHHHHHhccccccCC
Confidence 9888789999999999999 6543221 122344566677765432 2344568999999999999998653 3
Q ss_pred CceEEEecCCCCHHHHHHHHHHhCCCCCCC--CCCCCCCC----CCCCCcccChHHHHhhCCce-eCHHHHHHHHHHHHH
Q 026418 147 SGRYLCAESVLHRGEVVEILAKFFPEYPIP--TKCSDEKN----PRKKPYKFSNQKLKDLGLEF-TPVKQCLYETVKSLQ 219 (239)
Q Consensus 147 ~~~y~~~~~~~s~~el~~~i~~~~~~~~~~--~~~~~~~~----~~~~~~~~~~~k~~~lg~~p-~~~~e~i~~~~~~~~ 219 (239)
+++||++++.+|+.|+++.+.+.++ .+.+ ....+... .......+|++|+++|||+| ++++++|+++++|++
T Consensus 259 ~~~~ni~g~~~s~~e~~~~i~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~l~e~l~~~~~~~~ 337 (342)
T 2hrz_A 259 RRNLSMPGLSATVGEQIEALRKVAG-EKAVALIRREPNEMIMRMCEGWAPGFEAKRARELGFTAESSFEEIIQVHIEDEL 337 (342)
T ss_dssp CCEEECCCEEEEHHHHHHHHHHHHC-HHHHTTEEECCCHHHHHHHTTSCCCBCCHHHHHTTCCCCSSHHHHHHHHHHHHS
T ss_pred ccEEEcCCCCCCHHHHHHHHHHHcC-cccccceeeccCcchhhhhcccccccChHHHHHcCCCCCCCHHHHHHHHHHHhc
Confidence 4599998888999999999999873 2210 11111000 01122368999997799999 899999999999997
Q ss_pred HcCCC
Q 026418 220 EKGHL 224 (239)
Q Consensus 220 ~~g~~ 224 (239)
.|.+
T Consensus 338 -~~~~ 341 (342)
T 2hrz_A 338 -GGSL 341 (342)
T ss_dssp -TTCC
T ss_pred -CCCC
Confidence 4433
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=6.8e-26 Score=185.08 Aligned_cols=212 Identities=16% Similarity=0.099 Sum_probs=155.7
Q ss_pred chhHhHHHHHHHHHHHhc--CCCEEE-------EccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA--KVRRVV-------FTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEK 72 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~--~v~~~i-------~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~ 72 (239)
+++|+.++.+++++|++. ++++|| |+|| .++||..... ..+++|+++..+ +.+.| ..+|+
T Consensus 91 ~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss-~~vyg~~~~~-~~~~~E~~~~~~-----~~~~y----~~~E~ 159 (364)
T 2v6g_A 91 CEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGP-FESYGKIESH-DPPYTEDLPRLK-----YMNFY----YDLED 159 (364)
T ss_dssp HHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCC-GGGTTTSCCC-CSSBCTTSCCCS-----SCCHH----HHHHH
T ss_pred HHHhHHHHHHHHHHHHHhccccceEEeccCceEEEec-hhhccccccC-CCCCCccccCCc-----cchhh----HHHHH
Confidence 578999999999999998 789998 8999 5999875311 126788876322 25667 46899
Q ss_pred HHHHHHHHcC-ccEEEEecCcccCCCCCCCCCh-hHH-HHHHH--HcCCCCc-cCC-----CCCCceehHHHHHHHHHhh
Q 026418 73 AAWEEAVARG-VDLVVVNPVLVLGPLLQSTVNA-SII-HILKY--LNGSAKT-YAN-----SVQAYVHVRDVALAHILVY 141 (239)
Q Consensus 73 ~~~~~~~~~~-~~~~i~Rp~~v~G~~~~~~~~~-~~~-~~~~~--~~~~~~~-~~~-----~~~~~i~v~D~a~~~~~~~ 141 (239)
++++++++.+ ++++++||+.+|||+....... ... ++..+ ..|.++. +++ ...+++|++|+|++++.++
T Consensus 160 ~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~v~Dva~a~~~~~ 239 (364)
T 2v6g_A 160 IMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHIWAA 239 (364)
T ss_dssp HHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEEHHHHHHHHHHHH
T ss_pred HHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCcccccccCCCCcHHHHHHHHHHHH
Confidence 9999887676 9999999999999986532222 122 23334 2566654 443 3467899999999999999
Q ss_pred cCCCCCc-eEEEe-cCCCCHHHHHHHHHHhCCCCCCCCC--CCCC----------------------CCC---CC-----
Q 026418 142 ETPSASG-RYLCA-ESVLHRGEVVEILAKFFPEYPIPTK--CSDE----------------------KNP---RK----- 187 (239)
Q Consensus 142 ~~~~~~~-~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~--~~~~----------------------~~~---~~----- 187 (239)
.++...| +||++ ++++|+.|+++.+.+.++ .+.+.. ..+. ... ..
T Consensus 240 ~~~~~~g~~~ni~~~~~~s~~e~~~~i~~~~g-~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (364)
T 2v6g_A 240 VDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFG-VECGEYEEGVDLKLQDLMKGKEPVWEEIVRENGLTPTKLKDVGIWWF 318 (364)
T ss_dssp HCGGGTTEEEEECCSCCBCHHHHHHHHHHHHT-CCBCCCCTTCCCCHHHHTTTCHHHHHHHHHHTTCCCCCHHHHCCHHH
T ss_pred hCCCCCCceEEecCCCcCCHHHHHHHHHHHhC-CCCCCCCCCCCccHHHHHhhhHHHHHHHHHHhCCCccccccccccch
Confidence 8765445 99887 678999999999999873 322211 1110 000 00
Q ss_pred ------CC-cccChHHHHhhCCce-eCHHHHHHHHHHHHHHcCCCC
Q 026418 188 ------KP-YKFSNQKLKDLGLEF-TPVKQCLYETVKSLQEKGHLP 225 (239)
Q Consensus 188 ------~~-~~~~~~k~~~lg~~p-~~~~e~i~~~~~~~~~~g~~~ 225 (239)
.. ..+|++|+++|||+| ++++++|+++++|+++.|.+|
T Consensus 319 ~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~l~~~~~~~~~~g~lp 364 (364)
T 2v6g_A 319 GDVILGNECFLDSMNKSKEHGFLGFRNSKNAFISWIDKAKAYKIVP 364 (364)
T ss_dssp HHHHHTSCCCCBCCHHHHHTTCCCCCCHHHHHHHHHHHHHHTTSCC
T ss_pred hhhccccchhhcchHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 34 588999997799998 999999999999999999885
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.95 E-value=9.6e-27 Score=188.45 Aligned_cols=214 Identities=24% Similarity=0.315 Sum_probs=157.8
Q ss_pred chhHhHHHHHHHHHHHh-cCCCEEEEccchhhhccCCCC-CCCccccCCCCCChhh----------cccCCchHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE-AKVRRVVFTSSIGAVYMDPNR-SPDDVVDESCWSDLEF----------CKNTKNWYCYGKAV 69 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~-~~v~~~i~~Ss~~~vy~~~~~-~~~~~~~E~~~~~~~~----------~~~~~~~Y~~sK~~ 69 (239)
+++|+.++.+++++|.+ .++++|||+||. ++|+.... .+..+++|+++..... +..|.+.|+.+|.+
T Consensus 104 ~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~-~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 182 (342)
T 1y1p_A 104 VTPAIGGTLNALRAAAATPSVKRFVLTSST-VSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTE 182 (342)
T ss_dssp HHHHHHHHHHHHHHHHTCTTCCEEEEECCG-GGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCCcEEEEeccH-HHhcCCCCCCCCcccCccccCchhhhhhccccccccccchHHHHHHHHH
Confidence 57899999999999985 568999999995 77754321 1113788887432110 12356789999999
Q ss_pred HHHHHHHHHHHc--CccEEEEecCcccCCCCCCCC--ChhHHHHHHHHcCCCCc-cCC-CCCCceehHHHHHHHHHhhcC
Q 026418 70 AEKAAWEEAVAR--GVDLVVVNPVLVLGPLLQSTV--NASIIHILKYLNGSAKT-YAN-SVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 70 ~E~~~~~~~~~~--~~~~~i~Rp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~-~~~-~~~~~i~v~D~a~~~~~~~~~ 143 (239)
+|.+++.++++. +++++++||+++||+...... .....++..+.++.... +++ ..++|+|++|+|++++.++.+
T Consensus 183 ~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~ 262 (342)
T 1y1p_A 183 AELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVL 262 (342)
T ss_dssp HHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccCCcCCEeEHHHHHHHHHHHHcC
Confidence 999999998765 788999999999999765432 14445667777887654 333 567899999999999999987
Q ss_pred CCCCc-eEEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcccChHHHHh-hCC---ce-eCHHHHHHHHHHH
Q 026418 144 PSASG-RYLCAESVLHRGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKD-LGL---EF-TPVKQCLYETVKS 217 (239)
Q Consensus 144 ~~~~~-~y~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~---~p-~~~~e~i~~~~~~ 217 (239)
+...| .+.+++..+|+.|+++.+.+.++...++..... .......+|++|+++ ||| .+ ++++++|+++++|
T Consensus 263 ~~~~g~~~~~~g~~~s~~e~~~~i~~~~~~~~~~~~~~~---~~~~~~~~d~~k~~~~lg~~~~~~~~~l~~~l~~~~~~ 339 (342)
T 1y1p_A 263 PQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPADFPD---QGQDLSKFDTAPSLEILKSLGRPGWRSIEESIKDLVGS 339 (342)
T ss_dssp TTCCSCEEEECCEEECHHHHHHHHHHHCTTSCCCCCCCC---CCCCCCEECCHHHHHHHHHTTCCSCCCHHHHHHHHHCC
T ss_pred cccCCceEEEeCCCCCHHHHHHHHHHHCCCccCCCCCCc---cccccccCChHHHHHHHhhcccCCcCCHHHHHHHHHHH
Confidence 65445 556667789999999999999854333322211 112347789999976 777 44 8999999999988
Q ss_pred HH
Q 026418 218 LQ 219 (239)
Q Consensus 218 ~~ 219 (239)
++
T Consensus 340 ~~ 341 (342)
T 1y1p_A 340 ET 341 (342)
T ss_dssp SC
T ss_pred hh
Confidence 64
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.7e-25 Score=176.91 Aligned_cols=199 Identities=16% Similarity=0.090 Sum_probs=148.9
Q ss_pred chhHhHHHHHHHHHHHhcC--CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~--v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
++.|+.+|.+|++++++.+ ..+||++|| .++||+.... +.+|+++. .+.+.|+..+...|... ...
T Consensus 79 ~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss-~~vyg~~~~~---~~~E~~p~------~~~~~~~~~~~~~e~~~--~~~ 146 (298)
T 4b4o_A 79 LGSRLETTQLLAKAITKAPQPPKAWVLVTG-VAYYQPSLTA---EYDEDSPG------GDFDFFSNLVTKWEAAA--RLP 146 (298)
T ss_dssp HHHHHHHHHHHHHHHHHCSSCCSEEEEEEE-GGGSCCCSSC---CBCTTCCC------SCSSHHHHHHHHHHHHH--CCS
T ss_pred hhHHHHHHHHHHHHHHHhCCCceEEEEEee-eeeecCCCCC---cccccCCc------cccchhHHHHHHHHHHH--Hhh
Confidence 4679999999999999887 456899999 5999987765 78888763 45677888887777653 234
Q ss_pred HcCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCcc--CCCCCCceehHHHHHHHHHhhcCCCCCceEEEe-cCC
Q 026418 80 ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY--ANSVQAYVHVRDVALAHILVYETPSASGRYLCA-ESV 156 (239)
Q Consensus 80 ~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~ 156 (239)
..+++++++||+.+|||+. .....++.....+....+ ++..++|||++|+|+++..+++++...|+||++ +++
T Consensus 147 ~~~~~~~~~r~~~v~g~~~----~~~~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~~~~~~~~~~g~yn~~~~~~ 222 (298)
T 4b4o_A 147 GDSTRQVVVRSGVVLGRGG----GAMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHALEANHVHGVLNGVAPSS 222 (298)
T ss_dssp SSSSEEEEEEECEEECTTS----HHHHHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHHHHHHHCTTCCEEEEESCSCC
T ss_pred ccCCceeeeeeeeEEcCCC----CchhHHHHHHhcCCcceecccCceeecCcHHHHHHHHHHHHhCCCCCCeEEEECCCc
Confidence 5689999999999999963 223334444555655555 456789999999999999999988877899887 789
Q ss_pred CCHHHHHHHHHHhCCCCCCCCCCCCC----------CCCCCCCcccChHHHHhhCCce--eCHHHHHHHHHHH
Q 026418 157 LHRGEVVEILAKFFPEYPIPTKCSDE----------KNPRKKPYKFSNQKLKDLGLEF--TPVKQCLYETVKS 217 (239)
Q Consensus 157 ~s~~el~~~i~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~k~~~lg~~p--~~~~e~i~~~~~~ 217 (239)
+|+.|+++.+++.+ +.+.....+.. .........++++|++++||+| .+++++|++.++.
T Consensus 223 ~t~~e~~~~ia~~l-grp~~~pvP~~~~~~~~g~~~~~~~l~~~rv~~~kl~~~Gf~f~yp~l~~al~~l~~~ 294 (298)
T 4b4o_A 223 ATNAEFAQTFGAAL-GRRAFIPLPSAVVQAVFGRQRAIMLLEGQKVIPRRTLATGYQYSFPELGAALKEIAEN 294 (298)
T ss_dssp CBHHHHHHHHHHHH-TCCCCCCBCHHHHHHHHCHHHHHHHHCCCCBCCHHHHHTTCCCSCCSHHHHHHHHHHC
T ss_pred cCHHHHHHHHHHHh-CcCCcccCCHHHHHHHhcchhHHHhhCCCEEcHHHHHHCCCCCCCCCHHHHHHHHHHh
Confidence 99999999999997 43322211110 0000124567889999999998 5799999998774
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.92 E-value=5.1e-25 Score=187.67 Aligned_cols=199 Identities=13% Similarity=0.110 Sum_probs=143.2
Q ss_pred chhHhHHHHHHHHH-HHhcCCCEEEEccchhhhcc-CCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVA-AAEAKVRRVVFTSSIGAVYM-DPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a-~~~~~v~~~i~~Ss~~~vy~-~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++.+|+++ +++.++++|||+|| .++|| ..... +++|+++ .+.+.|+.+|...|.++..+ +
T Consensus 226 ~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS-~~vyg~~~~~~---~~~E~~~-------~~~~~y~~~~~~~E~~~~~~-~ 293 (516)
T 3oh8_A 226 RESRVLPTKFLAELVAESTQCTTMISASA-VGFYGHDRGDE---ILTEESE-------SGDDFLAEVCRDWEHATAPA-S 293 (516)
T ss_dssp HHHTHHHHHHHHHHHHHCSSCCEEEEEEE-GGGGCSEEEEE---EECTTSC-------CCSSHHHHHHHHHHHTTHHH-H
T ss_pred HHHHHHHHHHHHHHHHhcCCCCEEEEeCc-ceEecCCCCCC---ccCCCCC-------CCcChHHHHHHHHHHHHHHH-H
Confidence 46899999999999 66667999999999 59998 43333 7888876 25788999999999887654 5
Q ss_pred HcCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccC--CCCCCceehHHHHHHHHHhhcCCCCCceEEEe-cCC
Q 026418 80 ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYA--NSVQAYVHVRDVALAHILVYETPSASGRYLCA-ESV 156 (239)
Q Consensus 80 ~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~ 156 (239)
..|++++++||+++||++. .....++..+..+....++ +..++|+|++|+|++++.++.++...|+||++ +++
T Consensus 294 ~~gi~~~ilRp~~v~Gp~~----~~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~g~~ni~~~~~ 369 (516)
T 3oh8_A 294 DAGKRVAFIRTGVALSGRG----GMLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAIVDAQISGPINAVAPNP 369 (516)
T ss_dssp HTTCEEEEEEECEEEBTTB----SHHHHHHHTTC---CCCCTTSCCEECEEEHHHHHHHHHHHHHCTTCCEEEEESCSCC
T ss_pred hCCCCEEEEEeeEEECCCC----ChHHHHHHHHHhCCCcccCCCCceEceEeHHHHHHHHHHHHhCcccCCcEEEECCCC
Confidence 6799999999999999963 2222333334444444444 45678999999999999999987767789876 789
Q ss_pred CCHHHHHHHHHHhCCCCCC----CCCCCCCCCC-------CCCCcccChHHHHhhCCce-eC-HHHHHHHHHHH
Q 026418 157 LHRGEVVEILAKFFPEYPI----PTKCSDEKNP-------RKKPYKFSNQKLKDLGLEF-TP-VKQCLYETVKS 217 (239)
Q Consensus 157 ~s~~el~~~i~~~~~~~~~----~~~~~~~~~~-------~~~~~~~~~~k~~~lg~~p-~~-~~e~i~~~~~~ 217 (239)
+|+.|+++.+.+.+ +.+. |.+....... ......++++|+++|||+| ++ ++++|+++++.
T Consensus 370 ~s~~el~~~i~~~~-g~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~kl~~lG~~~~~~~l~e~l~~~l~~ 442 (516)
T 3oh8_A 370 VSNADMTKILATSM-HRPAFIQIPSLGPKILLGSQGAEELALASQRTAPAALENLSHTFRYTDIGAAIAHELGY 442 (516)
T ss_dssp EEHHHHHHHTTC----------------------CCGGGGGGCEEEECCHHHHHTTCCCSCSSHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHh-CCCCCCCCCHHHHHHHhCCchhHHHhhcCCeechHHHHHCCCCCCCCCHHHHHHHHhCc
Confidence 99999999999987 3322 2211111111 1234567889999999999 55 99999999864
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.8e-23 Score=164.09 Aligned_cols=184 Identities=15% Similarity=0.146 Sum_probs=139.1
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+++|+.++.+++++|++.++ ++||+||. ++|+.... +++|+++ ..|.+.|+.+|..+|.+++.
T Consensus 81 ~~~n~~~~~~l~~~~~~~~~-~iv~~SS~-~~~~~~~~----~~~e~~~------~~~~~~Y~~sK~~~e~~~~~----- 143 (273)
T 2ggs_A 81 YKINAEAVRHIVRAGKVIDS-YIVHISTD-YVFDGEKG----NYKEEDI------PNPINYYGLSKLLGETFALQ----- 143 (273)
T ss_dssp HHHHTHHHHHHHHHHHHTTC-EEEEEEEG-GGSCSSSC----SBCTTSC------CCCSSHHHHHHHHHHHHHCC-----
T ss_pred HHHhHHHHHHHHHHHHHhCC-eEEEEecc-eeEcCCCC----CcCCCCC------CCCCCHHHHHHHHHHHHHhC-----
Confidence 57899999999999999887 89999994 88865432 6788765 34578999999999999865
Q ss_pred CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCc-cCCCCCCceehHHHHHHHHHhhcCCCCCceEEEecCCCCHH
Q 026418 82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKT-YANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRG 160 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~~~~~s~~ 160 (239)
++++++||+.+||+. .....++..+..+.... +++ .++++|++|+|++++.++.++. .++||++++.+|+.
T Consensus 144 -~~~~~iR~~~v~G~~-----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dva~~i~~~~~~~~-~g~~~i~~~~~s~~ 215 (273)
T 2ggs_A 144 -DDSLIIRTSGIFRNK-----GFPIYVYKTLKEGKTVFAFKG-YYSPISARKLASAILELLELRK-TGIIHVAGERISRF 215 (273)
T ss_dssp -TTCEEEEECCCBSSS-----SHHHHHHHHHHTTCCEEEESC-EECCCBHHHHHHHHHHHHHHTC-CEEEECCCCCEEHH
T ss_pred -CCeEEEecccccccc-----HHHHHHHHHHHcCCCEEeecC-CCCceEHHHHHHHHHHHHhcCc-CCeEEECCCcccHH
Confidence 688999999999831 22223445556666543 455 7889999999999999997654 45998888889999
Q ss_pred HHHHHHHHhCCCCCCCCC----CCCCCCCCCCCcccChHHHHh-hCCce--eCHHHHH
Q 026418 161 EVVEILAKFFPEYPIPTK----CSDEKNPRKKPYKFSNQKLKD-LGLEF--TPVKQCL 211 (239)
Q Consensus 161 el~~~i~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~k~~~-lg~~p--~~~~e~i 211 (239)
|+++.+.+.+ +.+.+.. .............+|++|+++ |||+| ++++++|
T Consensus 216 e~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~l~~~~ 272 (273)
T 2ggs_A 216 ELALKIKEKF-NLPGEVKEVDEVRGWIAKRPYDSSLDSSRARKILSTDFYTLDLDGMV 272 (273)
T ss_dssp HHHHHHHHHT-TCCSCEEEESSCTTCCSCCCSBCCBCCHHHHHHCSSCCCSCCGGGCC
T ss_pred HHHHHHHHHh-CCChhhcccccccccccCCCcccccCHHHHHHHhCCCCCCccccccc
Confidence 9999999997 4332211 111112234568899999987 99998 6788764
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.88 E-value=4.1e-22 Score=166.13 Aligned_cols=209 Identities=14% Similarity=0.094 Sum_probs=152.3
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCC--CCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNR--SPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~--~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++.+++++|.+ ++++|||+||. ++ |.... ....+++|+++... ..+.+.|+.+|+++|.+++.++
T Consensus 171 ~~~Nv~g~~~l~~aa~~-~~~~~v~~SS~-~~-G~~~~~~~~~~~~~E~~~~~~---~~~~~~Y~~sK~~~E~~~~~~~- 243 (427)
T 4f6c_A 171 EKVNVQGTVDVIRLAQQ-HHARLIYVSTI-SV-GTYFDIDTEDVTFSEADVYKG---QLLTSPYTRSKFYSELKVLEAV- 243 (427)
T ss_dssp HHHHHHHHHHHHHHHHH-TTCEEEEEEEG-GG-GSEECSSCSCCEECTTCSCSS---CCCCSHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHHHh-cCCcEEEECch-Hh-CCCccCCCCCccccccccccC---CCCCCchHHHHHHHHHHHHHHH-
Confidence 57899999999999999 77999999995 66 44211 12347888876443 2478899999999999999986
Q ss_pred HcCccEEEEecCcccCCCCCCCC------ChhHHHHHHHHcCCCCcc--CCCCCCceehHHHHHHHHHhhcCCCCCceEE
Q 026418 80 ARGVDLVVVNPVLVLGPLLQSTV------NASIIHILKYLNGSAKTY--ANSVQAYVHVRDVALAHILVYETPSASGRYL 151 (239)
Q Consensus 80 ~~~~~~~i~Rp~~v~G~~~~~~~------~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~ 151 (239)
+.|++++++||++|||+...... .....++..+..+..... ++..++|+|++|+|++++.++..+..+++||
T Consensus 244 ~~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~DvA~ai~~~~~~~~~g~~~~ 323 (427)
T 4f6c_A 244 NNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNTPQIIYH 323 (427)
T ss_dssp HTTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEHHHHTCEECCEEHHHHHHHHHHHTTSCCCCSEEE
T ss_pred HcCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCCccccceEEEeeHHHHHHHHHHHHcCCCCCCEEE
Confidence 46999999999999999865432 123355666666665443 5778899999999999999998776445998
Q ss_pred Ee-cCCCCHHHHHHHHHHhCCCCCCCCCCCCC-------C-----------CCCCCCcccChHHH----HhhCCceeC-H
Q 026418 152 CA-ESVLHRGEVVEILAKFFPEYPIPTKCSDE-------K-----------NPRKKPYKFSNQKL----KDLGLEFTP-V 207 (239)
Q Consensus 152 ~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~-------~-----------~~~~~~~~~~~~k~----~~lg~~p~~-~ 207 (239)
++ ++++++.|+++.+.+. + . +....+. . ........+|+++. +++||.+.+ .
T Consensus 324 l~~~~~~s~~el~~~i~~~-g-~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~G~~~~~~~ 399 (427)
T 4f6c_A 324 VLSPNKMPVKSLLECVKRK-E-I--ELVSDESFNEILQKQDMYETIGLTSVDREQQLAMIDTTLTLKIMNHISEKWPTIT 399 (427)
T ss_dssp ESCSCCEEHHHHHHHHHSS-C-C--EEECHHHHHHHHHHTTCHHHHHHHHHHHTSEECEECCHHHHHHHHHTTCCCCCCC
T ss_pred ecCCCCCcHHHHHHHHHHc-C-C--cccCHHHHHHHHHhcCchhhhhhhhccccCCceeccHHHHHHHHHhcCCCCCCCC
Confidence 87 7899999999999983 3 1 1110000 0 00122466777764 447999744 4
Q ss_pred HHHHHHHHHHHHHc
Q 026418 208 KQCLYETVKSLQEK 221 (239)
Q Consensus 208 ~e~i~~~~~~~~~~ 221 (239)
++.++++++++.+.
T Consensus 400 ~~~l~~~~~~l~~~ 413 (427)
T 4f6c_A 400 NNWLYHWAQYIKTI 413 (427)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 55889988888765
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.88 E-value=4e-22 Score=169.64 Aligned_cols=212 Identities=14% Similarity=0.071 Sum_probs=151.7
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCC--CCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNR--SPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~--~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++.+++++|++ ++++|||+||. ++ |.... ....+++|+++... ..+.+.|+.+|+.+|++++.+.+
T Consensus 252 ~~~Nv~gt~~ll~~a~~-~~~~~v~iSS~-~v-G~~~~~~~~~~~~~E~~~~~~---~~~~~~Y~~sK~~~E~~~~~~~~ 325 (508)
T 4f6l_B 252 EKVNVQGTVDVIRLAQQ-HHARLIYVSTI-SV-GTYFDIDTEDVTFSEADVYKG---QLLTSPYTRSKFYSELKVLEAVN 325 (508)
T ss_dssp HHHHHHHHHHHHHHHHT-TTCEEEEEEES-CT-TSEECTTCSCCEECTTCSCSS---BCCCSHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHh-CCCcEEEeCCh-hh-ccCCccCCcCccccccccccc---ccCCCcHHHHHHHHHHHHHHHHH
Confidence 57899999999999999 67899999995 77 43211 12347888876443 24688999999999999999864
Q ss_pred HcCccEEEEecCcccCCCCCCCC------ChhHHHHHHHHcCCCCcc--CCCCCCceehHHHHHHHHHhhcCCCCCceEE
Q 026418 80 ARGVDLVVVNPVLVLGPLLQSTV------NASIIHILKYLNGSAKTY--ANSVQAYVHVRDVALAHILVYETPSASGRYL 151 (239)
Q Consensus 80 ~~~~~~~i~Rp~~v~G~~~~~~~------~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~ 151 (239)
.|++++++||+.|||+...... .....++..+..+..... ++..++|+|++|+|++++.++..+..+++||
T Consensus 326 -~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~v~v~DvA~ai~~~~~~~~~~~~~n 404 (508)
T 4f6l_B 326 -NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNTPQIIYH 404 (508)
T ss_dssp -TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEETTGGGSEEECEEHHHHHHHHHHHTTBCCSCSEEE
T ss_pred -cCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCCCccCceEEEEcHHHHHHHHHHHHhCCCCCCEEE
Confidence 6999999999999999765431 123355566666554443 4677889999999999999998776555998
Q ss_pred Ee-cCCCCHHHHHHHHHHhCCCCCCC--CCC---CCC----------CCCCCCCcccChHHH----HhhCCce-eCHHHH
Q 026418 152 CA-ESVLHRGEVVEILAKFFPEYPIP--TKC---SDE----------KNPRKKPYKFSNQKL----KDLGLEF-TPVKQC 210 (239)
Q Consensus 152 ~~-~~~~s~~el~~~i~~~~~~~~~~--~~~---~~~----------~~~~~~~~~~~~~k~----~~lg~~p-~~~~e~ 210 (239)
++ +.++++.|+++.+.+.. -..++ .+. ... .........+|+++. +++||.+ ...++.
T Consensus 405 l~~~~~~s~~el~~~i~~~~-~~~~~~~~w~~~l~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~G~~~~~~~~~~ 483 (508)
T 4f6l_B 405 VLSPNKMPVKSLLECVKRKE-IELVSDESFNEILQKQDMYETIGLTSVDREQQLAMIDTTLTLKIMNHISEKWPTITNNW 483 (508)
T ss_dssp ESCSCEEEHHHHHHHHHSSC-CEEECHHHHHHHHHTTCCHHHHHHHHTGGGSEECEECCHHHHHHHHHHSCCCCCCCHHH
T ss_pred eCCCCCCCHHHHHHHHHHcC-CcccCHHHHHHHHHhcCCccchhcccccccCcceecchHHHHHHHHHcCCCCCCCCHHH
Confidence 87 78899999999999763 00000 000 000 001123566777764 4579997 555778
Q ss_pred HHHHHHHHHHc
Q 026418 211 LYETVKSLQEK 221 (239)
Q Consensus 211 i~~~~~~~~~~ 221 (239)
+++.++++.+.
T Consensus 484 l~~~~~~~~~~ 494 (508)
T 4f6l_B 484 LYHWAQYIKTI 494 (508)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88888888764
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.1e-21 Score=163.94 Aligned_cols=164 Identities=18% Similarity=0.066 Sum_probs=121.6
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhc-----ccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFC-----KNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~-----~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++.+++++|.+.++++|||+|| .++|+..... +++|+++..+..+ ....+.|+.+|+.+|.+++.
T Consensus 187 ~~~Nv~gt~~ll~aa~~~~~~~~V~iSS-~~v~~~~~~~---~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 262 (478)
T 4dqv_A 187 FGPNVAGTAELIRIALTTKLKPFTYVST-ADVGAAIEPS---AFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLRE 262 (478)
T ss_dssp HHHHHHHHHHHHHHHTSSSCCCEEEEEE-GGGGTTSCTT---TCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCCeEEEEee-hhhcCccCCC---CcCCcccccccCcccccccccccchHHHHHHHHHHHHH
Confidence 5789999999999999999999999999 4999876554 6788765433211 01125599999999999999
Q ss_pred HHHHcCccEEEEecCcccCCCCCCC----CChhHHHHHHHH-cCCCCcc----------CCCCCCceehHHHHHHHHHhh
Q 026418 77 EAVARGVDLVVVNPVLVLGPLLQST----VNASIIHILKYL-NGSAKTY----------ANSVQAYVHVRDVALAHILVY 141 (239)
Q Consensus 77 ~~~~~~~~~~i~Rp~~v~G~~~~~~----~~~~~~~~~~~~-~~~~~~~----------~~~~~~~i~v~D~a~~~~~~~ 141 (239)
++++.|++++++||++|||+..... ......++.... .|..+.. ++..++++|++|+|++++.++
T Consensus 263 ~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~ 342 (478)
T 4dqv_A 263 ANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLG 342 (478)
T ss_dssp HHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHH
T ss_pred HHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHH
Confidence 9887899999999999999864221 112222333322 2433221 145678999999999999998
Q ss_pred cC----CCCCc-eEEEe-cCC--CCHHHHHHHHHHh
Q 026418 142 ET----PSASG-RYLCA-ESV--LHRGEVVEILAKF 169 (239)
Q Consensus 142 ~~----~~~~~-~y~~~-~~~--~s~~el~~~i~~~ 169 (239)
.+ +...+ +||++ +++ +|+.|+++.+.+.
T Consensus 343 ~~~~~~~~~~~~~ynv~~~~~~~~s~~el~~~l~~~ 378 (478)
T 4dqv_A 343 ARVAGSSLAGFATYHVMNPHDDGIGLDEYVDWLIEA 378 (478)
T ss_dssp HTTC-CCCCSEEEEEESCCCCSSCSHHHHHHHHHHT
T ss_pred hhcccCCCCCCceEEecCCCCCCcCHHHHHHHHHHc
Confidence 75 33334 99887 565 9999999999985
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.84 E-value=1.3e-20 Score=154.24 Aligned_cols=144 Identities=18% Similarity=0.105 Sum_probs=122.5
Q ss_pred chhHhHHHHHHHHHHHhcCCC-EEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKVR-RVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA 80 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~-~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 80 (239)
+++|+.++.+|+++|++.+++ +|||+||. ++|+ .+.|+.+|..+|++++.++++
T Consensus 66 ~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~-~~~~------------------------~~~Y~~sK~~~E~~~~~~~~~ 120 (369)
T 3st7_A 66 SLGNVSYLDHVLDILTRNTKKPAILLSSSI-QATQ------------------------DNPYGESKLQGEQLLREYAEE 120 (369)
T ss_dssp SSSCCBHHHHHHHHHTTCSSCCEEEEEEEG-GGGS------------------------CSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEEeCch-hhcC------------------------CCCchHHHHHHHHHHHHHHHH
Confidence 568999999999999999977 99999995 7774 367999999999999999988
Q ss_pred cCccEEEEecCcccCCCCCCCCC-hhHHHHHHHHcCCCCcc--CCCCCCceehHHHHHHHHHhhcCCCC--CceEEEe-c
Q 026418 81 RGVDLVVVNPVLVLGPLLQSTVN-ASIIHILKYLNGSAKTY--ANSVQAYVHVRDVALAHILVYETPSA--SGRYLCA-E 154 (239)
Q Consensus 81 ~~~~~~i~Rp~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~i~v~D~a~~~~~~~~~~~~--~~~y~~~-~ 154 (239)
.+++++++||+++||++..+... ....++..+..+..+.. ++..++++|++|+|++++.++.++.. +++|+++ +
T Consensus 121 ~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~i~~~ 200 (369)
T 3st7_A 121 YGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVPNV 200 (369)
T ss_dssp HCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHHHTCCCEETTEECCSCC
T ss_pred hCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHHHhCCcccCCceEEeCCC
Confidence 89999999999999998765433 34455667777777654 45667899999999999999998766 4599877 6
Q ss_pred CCCCHHHHHHHHHHhC
Q 026418 155 SVLHRGEVVEILAKFF 170 (239)
Q Consensus 155 ~~~s~~el~~~i~~~~ 170 (239)
+.+|+.|+++.+.+.+
T Consensus 201 ~~~s~~e~~~~~~~~~ 216 (369)
T 3st7_A 201 FKVTLGEIVDLLYKFK 216 (369)
T ss_dssp EEEEHHHHHHHHHHHH
T ss_pred CceeHHHHHHHHHHHh
Confidence 8999999999999986
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.84 E-value=1.8e-20 Score=148.06 Aligned_cols=177 Identities=16% Similarity=0.158 Sum_probs=129.6
Q ss_pred hhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHcC
Q 026418 3 EPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVARG 82 (239)
Q Consensus 3 ~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~ 82 (239)
++|+.++.+++++|++.++++|||+||. ++|. . ...|+.+|..+|++++. .+
T Consensus 81 ~~n~~~~~~l~~a~~~~~~~~~v~~Ss~-~~~~----~-------------------~~~y~~~K~~~E~~~~~----~~ 132 (287)
T 2jl1_A 81 TLLIVQHANVVKAARDAGVKHIAYTGYA-FAEE----S-------------------IIPLAHVHLATEYAIRT----TN 132 (287)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEEEET-TGGG----C-------------------CSTHHHHHHHHHHHHHH----TT
T ss_pred hHHHHHHHHHHHHHHHcCCCEEEEECCC-CCCC----C-------------------CCchHHHHHHHHHHHHH----cC
Confidence 3599999999999999999999999995 6551 0 13699999999998853 58
Q ss_pred ccEEEEecCcccCCCCCCCCChhHHHHHHHH-cCCCCc-cCCCCCCceehHHHHHHHHHhhcCCCCCc-eEEEe-cCCCC
Q 026418 83 VDLVVVNPVLVLGPLLQSTVNASIIHILKYL-NGSAKT-YANSVQAYVHVRDVALAHILVYETPSASG-RYLCA-ESVLH 158 (239)
Q Consensus 83 ~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~y~~~-~~~~s 158 (239)
++++++||+.++|+... . .+...+ .+.... .+++.++++|++|+|++++.++.++...| +|+++ ++.+|
T Consensus 133 ~~~~ilrp~~~~~~~~~---~----~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s 205 (287)
T 2jl1_A 133 IPYTFLRNALYTDFFVN---E----GLRASTESGAIVTNAGSGIVNSVTRNELALAAATVLTEEGHENKTYNLVSNQPWT 205 (287)
T ss_dssp CCEEEEEECCBHHHHSS---G----GGHHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHTSSSCTTEEEEECCSSCBC
T ss_pred CCeEEEECCEeccccch---h----hHHHHhhCCceeccCCCCccCccCHHHHHHHHHHHhcCCCCCCcEEEecCCCcCC
Confidence 99999999998886411 1 122222 343322 35678899999999999999998764445 89887 56899
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCC--------CCC----------------CCCcccChHHHHh-hCCceeCHHHHHHH
Q 026418 159 RGEVVEILAKFFPEYPIPTKCSDEK--------NPR----------------KKPYKFSNQKLKD-LGLEFTPVKQCLYE 213 (239)
Q Consensus 159 ~~el~~~i~~~~~~~~~~~~~~~~~--------~~~----------------~~~~~~~~~k~~~-lg~~p~~~~e~i~~ 213 (239)
+.|+++.+.+.+ +.+++....+.. ... ......|++++++ || .+++++|+|++
T Consensus 206 ~~e~~~~i~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG-~~~~l~e~l~~ 283 (287)
T 2jl1_A 206 FDELAQILSEVS-GKKVVHQPVSFEEEKNFLVNAGVPEPFTEITAAIYDAISKGEASKTSDDLQKLIG-SLTPLKETVKQ 283 (287)
T ss_dssp HHHHHHHHHHHH-SSCCEEEECCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHS-SCCCHHHHHHH
T ss_pred HHHHHHHHHHHH-CCcceEEeCCHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCCCcCCchHHHHHhC-CCCCHHHHHHH
Confidence 999999999997 444332211100 000 1245668889977 89 55999999999
Q ss_pred HHH
Q 026418 214 TVK 216 (239)
Q Consensus 214 ~~~ 216 (239)
+++
T Consensus 284 ~~~ 286 (287)
T 2jl1_A 284 ALK 286 (287)
T ss_dssp HHT
T ss_pred Hhc
Confidence 875
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.83 E-value=5.3e-20 Score=140.57 Aligned_cols=141 Identities=16% Similarity=0.069 Sum_probs=106.3
Q ss_pred CchhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHH
Q 026418 1 MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA 80 (239)
Q Consensus 1 ~~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 80 (239)
++++|+.++.+++++|++.++++|||+||. ++|....+ ...|+++ ..|.+.|+.+|..+|.+++.++++
T Consensus 84 ~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~-~~~~~~~~----~~~~~~~------~~p~~~Y~~sK~~~e~~~~~~~~~ 152 (227)
T 3dhn_A 84 IYDETIKVYLTIIDGVKKAGVNRFLMVGGA-GSLFIAPG----LRLMDSG------EVPENILPGVKALGEFYLNFLMKE 152 (227)
T ss_dssp CCSHHHHHHHHHHHHHHHTTCSEEEEECCS-TTSEEETT----EEGGGTT------CSCGGGHHHHHHHHHHHHHTGGGC
T ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEEeCCh-hhccCCCC----CccccCC------cchHHHHHHHHHHHHHHHHHHhhc
Confidence 367899999999999999999999999996 55543332 2233333 356788999999999999998877
Q ss_pred cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCc-eEEEe-cCCCC
Q 026418 81 RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASG-RYLCA-ESVLH 158 (239)
Q Consensus 81 ~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~y~~~-~~~~s 158 (239)
.+++++++||+.+||++....... ..+..+......++++|++|+|++++.++.++...| +|+++ +++.+
T Consensus 153 ~~~~~~ilrp~~v~g~~~~~~~~~--------~~~~~~~~~~~~~~~i~~~Dva~ai~~~l~~~~~~g~~~~~~~~~~~~ 224 (227)
T 3dhn_A 153 KEIDWVFFSPAADMRPGVRTGRYR--------LGKDDMIVDIVGNSHISVEDYAAAMIDELEHPKHHQERFTIGYLEHHH 224 (227)
T ss_dssp CSSEEEEEECCSEEESCCCCCCCE--------EESSBCCCCTTSCCEEEHHHHHHHHHHHHHSCCCCSEEEEEECCSCCC
T ss_pred cCccEEEEeCCcccCCCcccccee--------ecCCCcccCCCCCcEEeHHHHHHHHHHHHhCccccCcEEEEEeehhcc
Confidence 899999999999999976433211 122222233334899999999999999999887666 99777 67777
Q ss_pred HH
Q 026418 159 RG 160 (239)
Q Consensus 159 ~~ 160 (239)
+.
T Consensus 225 ~~ 226 (227)
T 3dhn_A 225 HH 226 (227)
T ss_dssp --
T ss_pred cC
Confidence 64
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=9.6e-21 Score=149.54 Aligned_cols=179 Identities=17% Similarity=0.063 Sum_probs=126.2
Q ss_pred hHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHcCc
Q 026418 4 PAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVARGV 83 (239)
Q Consensus 4 ~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~ 83 (239)
.|+.++++++++|++.++++|||+||. ++|. . ...|+.+|..+|+++++ .++
T Consensus 79 ~~~~~~~~l~~a~~~~~~~~~v~~Ss~-~~~~----~-------------------~~~y~~sK~~~e~~~~~----~~~ 130 (286)
T 2zcu_A 79 QRAPQHRNVINAAKAAGVKFIAYTSLL-HADT----S-------------------PLGLADEHIETEKMLAD----SGI 130 (286)
T ss_dssp ---CHHHHHHHHHHHHTCCEEEEEEET-TTTT----C-------------------CSTTHHHHHHHHHHHHH----HCS
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEECCC-CCCC----C-------------------cchhHHHHHHHHHHHHH----cCC
Confidence 578999999999999999999999995 6651 0 13699999999999864 489
Q ss_pred cEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCcc--CCCCCCceehHHHHHHHHHhhcCCCCCc-eEEEe-cCCCCH
Q 026418 84 DLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY--ANSVQAYVHVRDVALAHILVYETPSASG-RYLCA-ESVLHR 159 (239)
Q Consensus 84 ~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~y~~~-~~~~s~ 159 (239)
+++++||+.++++.. ..+.....+....+ ++..++++|++|+|++++.++.++...| +|+++ ++.+|+
T Consensus 131 ~~~ilrp~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~ 202 (286)
T 2zcu_A 131 VYTLLRNGWYSENYL--------ASAPAALEHGVFIGAAGDGKIASATRADYAAAAARVISEAGHEGKVYELAGDSAWTL 202 (286)
T ss_dssp EEEEEEECCBHHHHH--------TTHHHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHHSSSCTTCEEEECCSSCBCH
T ss_pred CeEEEeChHHhhhhH--------HHhHHhhcCCceeccCCCCccccccHHHHHHHHHHHhcCCCCCCceEEEeCCCcCCH
Confidence 999999987766421 11222332222223 4567899999999999999998754444 89887 568999
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCC--------CCC----------------CCCcccChHHHHh-hCCceeCHHHHHHHH
Q 026418 160 GEVVEILAKFFPEYPIPTKCSDEK--------NPR----------------KKPYKFSNQKLKD-LGLEFTPVKQCLYET 214 (239)
Q Consensus 160 ~el~~~i~~~~~~~~~~~~~~~~~--------~~~----------------~~~~~~~~~k~~~-lg~~p~~~~e~i~~~ 214 (239)
.|+++.+.+.+ +.+++....+.. ... ......|++++++ |||.+++++++|+++
T Consensus 203 ~e~~~~i~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~e~l~~~ 281 (286)
T 2zcu_A 203 TQLAAELTKQS-GKQVTYQNLSEADFAAALKSVGLPDGLADMLADSDVGASKGGLFDDSKTLSKLIGHPTTTLAESVSHL 281 (286)
T ss_dssp HHHHHHHHHHH-SSCCEEEECCHHHHHHHHTTSSCCHHHHHHHHHHHHHHHTTTTCCCCCHHHHHHTSCCCCHHHHHHGG
T ss_pred HHHHHHHHHHH-CCCCceeeCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCCccCchHHHHHhCcCCCCHHHHHHHH
Confidence 99999999987 443322111100 000 1135567889877 898779999999999
Q ss_pred HHHHH
Q 026418 215 VKSLQ 219 (239)
Q Consensus 215 ~~~~~ 219 (239)
++|+.
T Consensus 282 ~~~~~ 286 (286)
T 2zcu_A 282 FNVNN 286 (286)
T ss_dssp GC---
T ss_pred HhhcC
Confidence 98873
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.81 E-value=3.2e-19 Score=139.58 Aligned_cols=154 Identities=17% Similarity=0.092 Sum_probs=119.3
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+++|+.++.+++++|++.++++|||+|| .++|+..... .+++|+++. .|.+.|+.+|..+|.+++.+.+..
T Consensus 83 ~~~n~~~~~~l~~a~~~~~~~~iv~~SS-~~~~~~~~~~--~~~~E~~~~------~~~~~Y~~sK~~~e~~~~~~~~~~ 153 (267)
T 3ay3_A 83 LQANIIGAYNLYEAARNLGKPRIVFASS-NHTIGYYPRT--TRIDTEVPR------RPDSLYGLSKCFGEDLASLYYHKF 153 (267)
T ss_dssp HHHTHHHHHHHHHHHHHTTCCEEEEEEE-GGGSTTSBTT--SCBCTTSCC------CCCSHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEeCC-HHHhCCCCCC--CCCCCCCCC------CCCChHHHHHHHHHHHHHHHHHHc
Confidence 5689999999999999999999999999 4888764321 268888763 567899999999999999988788
Q ss_pred CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCc-eEEEecCCCCHH
Q 026418 82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASG-RYLCAESVLHRG 160 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~y~~~~~~~s~~ 160 (239)
+++++++||+.+|+... .+...++++|++|+|++++.++.++...+ +|++.+..
T Consensus 154 gi~~~~lrp~~v~~~~~---------------------~~~~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~~~~---- 208 (267)
T 3ay3_A 154 DIETLNIRIGSCFPKPK---------------------DARMMATWLSVDDFMRLMKRAFVAPKLGCTVVYGASAN---- 208 (267)
T ss_dssp CCCEEEEEECBCSSSCC---------------------SHHHHHHBCCHHHHHHHHHHHHHSSCCCEEEEEECCSC----
T ss_pred CCCEEEEeceeecCCCC---------------------CCCeeeccccHHHHHHHHHHHHhCCCCCceeEecCCCc----
Confidence 99999999999995321 01123578999999999999998765533 66654210
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCCCcccChHHHHhhCCce-eCHHHHHHHHHH
Q 026418 161 EVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKDLGLEF-TPVKQCLYETVK 216 (239)
Q Consensus 161 el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~p-~~~~e~i~~~~~ 216 (239)
...+.|..+++.|||+| ++++++++++.+
T Consensus 209 ---------------------------~~~~~d~~~~~~lg~~p~~~~~~~~~~~~~ 238 (267)
T 3ay3_A 209 ---------------------------TESWWDNDKSAFLGWVPQDSSEIWREEIEQ 238 (267)
T ss_dssp ---------------------------SSCCBCCGGGGGGCCCCCCCGGGGHHHHHH
T ss_pred ---------------------------cccccCHHHHHHcCCCCCCCHHHHHHHHHh
Confidence 12345666665599999 899999988753
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.9e-19 Score=145.92 Aligned_cols=141 Identities=13% Similarity=0.082 Sum_probs=114.4
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHH-
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA- 80 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 80 (239)
+++|+.|+.+++++|.+.++++||++||. ..+ .|.+.|+.+|.++|.+++.+++.
T Consensus 115 ~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~-~~~-----------------------~p~~~Y~~sK~~~E~~~~~~~~~~ 170 (344)
T 2gn4_A 115 IKTNIMGASNVINACLKNAISQVIALSTD-KAA-----------------------NPINLYGATKLCSDKLFVSANNFK 170 (344)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEECCG-GGS-----------------------SCCSHHHHHHHHHHHHHHHGGGCC
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEecCC-ccC-----------------------CCccHHHHHHHHHHHHHHHHHHHh
Confidence 57899999999999999999999999995 433 23578999999999999988653
Q ss_pred --cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCC-CCcc--CCCCCCceehHHHHHHHHHhhcCCCCCceEEEecC
Q 026418 81 --RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGS-AKTY--ANSVQAYVHVRDVALAHILVYETPSASGRYLCAES 155 (239)
Q Consensus 81 --~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~~~ 155 (239)
.+++++++||+++||+.. .....++..+..|. +... ++..++|+|++|+|++++.++.+...+.+|++++.
T Consensus 171 ~~~g~~~~~vRpg~v~g~~~----~~i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v~~~l~~~~~g~~~~~~~~ 246 (344)
T 2gn4_A 171 GSSQTQFSVVRYGNVVGSRG----SVVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKRMHGGEIFVPKIP 246 (344)
T ss_dssp CSSCCEEEEECCCEETTCTT----SHHHHHHHHHHHTCCCEEESCTTCEEEEECHHHHHHHHHHHHHHCCSSCEEEECCC
T ss_pred CCCCcEEEEEEeccEECCCC----CHHHHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHHHHHHHhhccCCCEEecCCC
Confidence 579999999999999863 23344556666776 4443 34567899999999999999987654449998877
Q ss_pred CCCHHHHHHHHHHhC
Q 026418 156 VLHRGEVVEILAKFF 170 (239)
Q Consensus 156 ~~s~~el~~~i~~~~ 170 (239)
.+++.|+++.+.+.+
T Consensus 247 ~~s~~el~~~i~~~~ 261 (344)
T 2gn4_A 247 SMKMTDLAKALAPNT 261 (344)
T ss_dssp EEEHHHHHHHHCTTC
T ss_pred cEEHHHHHHHHHHhC
Confidence 899999999998765
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.75 E-value=3.6e-18 Score=129.70 Aligned_cols=132 Identities=17% Similarity=0.121 Sum_probs=105.1
Q ss_pred CchhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHH
Q 026418 1 MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA 80 (239)
Q Consensus 1 ~~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 80 (239)
++++|+.++.+++++|++.++++|||+||. ..++.. +.+| . +..|.+.|+.+|..+|++++ +.
T Consensus 78 ~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~-~~~~~~------~~~e-~------~~~~~~~Y~~sK~~~e~~~~---~~ 140 (219)
T 3dqp_A 78 LLKVDLYGAVKLMQAAEKAEVKRFILLSTI-FSLQPE------KWIG-A------GFDALKDYYIAKHFADLYLT---KE 140 (219)
T ss_dssp CCCCCCHHHHHHHHHHHHTTCCEEEEECCT-TTTCGG------GCCS-H------HHHHTHHHHHHHHHHHHHHH---HS
T ss_pred cEeEeHHHHHHHHHHHHHhCCCEEEEECcc-cccCCC------cccc-c------ccccccHHHHHHHHHHHHHH---hc
Confidence 367899999999999999999999999995 665422 3344 1 13567899999999999986 46
Q ss_pred cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCc-eEEEecCCCCH
Q 026418 81 RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASG-RYLCAESVLHR 159 (239)
Q Consensus 81 ~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~y~~~~~~~s~ 159 (239)
.+++++++||+.+||+...... .+++..+++++++|+|++++.++.++...+ +|++++...++
T Consensus 141 ~~i~~~ilrp~~v~g~~~~~~~----------------~~~~~~~~~i~~~Dva~~i~~~l~~~~~~g~~~~i~~g~~~~ 204 (219)
T 3dqp_A 141 TNLDYTIIQPGALTEEEATGLI----------------DINDEVSASNTIGDVADTIKELVMTDHSIGKVISMHNGKTAI 204 (219)
T ss_dssp CCCEEEEEEECSEECSCCCSEE----------------EESSSCCCCEEHHHHHHHHHHHHTCGGGTTEEEEEEECSEEH
T ss_pred cCCcEEEEeCceEecCCCCCcc----------------ccCCCcCCcccHHHHHHHHHHHHhCccccCcEEEeCCCCccH
Confidence 6999999999999998643211 124667899999999999999998776545 99998667999
Q ss_pred HHHHHH
Q 026418 160 GEVVEI 165 (239)
Q Consensus 160 ~el~~~ 165 (239)
.|+...
T Consensus 205 ~e~~~~ 210 (219)
T 3dqp_A 205 KEALES 210 (219)
T ss_dssp HHHHHT
T ss_pred HHHHHH
Confidence 988764
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=2.5e-17 Score=133.58 Aligned_cols=192 Identities=13% Similarity=0.108 Sum_probs=126.2
Q ss_pred hHhHHHHHHHHHHHhcC-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHcC
Q 026418 4 PAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVARG 82 (239)
Q Consensus 4 ~Nv~~t~~ll~a~~~~~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~ 82 (239)
.|+.++.+|+++|++.+ +++||+ |+ ||. ..+|+++ ..|.+.|+.+|..+|+++++ .|
T Consensus 94 ~n~~~~~~l~~aa~~~g~v~~~v~-S~----~g~-------~~~e~~~------~~p~~~y~~sK~~~e~~l~~----~g 151 (346)
T 3i6i_A 94 ESILDQIALVKAMKAVGTIKRFLP-SE----FGH-------DVNRADP------VEPGLNMYREKRRVRQLVEE----SG 151 (346)
T ss_dssp GGGGGHHHHHHHHHHHCCCSEEEC-SC----CSS-------CTTTCCC------CTTHHHHHHHHHHHHHHHHH----TT
T ss_pred hhHHHHHHHHHHHHHcCCceEEee-cc----cCC-------CCCccCc------CCCcchHHHHHHHHHHHHHH----cC
Confidence 48999999999999999 999996 44 332 2344443 24567899999999998865 58
Q ss_pred ccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCC-Ccc--CCCCCCceehHHHHHHHHHhhcCCCCCc-eEEEe--cCC
Q 026418 83 VDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSA-KTY--ANSVQAYVHVRDVALAHILVYETPSASG-RYLCA--ESV 156 (239)
Q Consensus 83 ~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~y~~~--~~~ 156 (239)
++++++||+.++|....... ........+.. ..+ ++..++|+|++|+|++++.++.++...+ +|++. ++.
T Consensus 152 ~~~tivrpg~~~g~~~~~~~----~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~g~~~~ 227 (346)
T 3i6i_A 152 IPFTYICCNSIASWPYYNNI----HPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLNKSVHFRPSCNC 227 (346)
T ss_dssp CCBEEEECCEESSCCCSCC---------CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGE
T ss_pred CCEEEEEecccccccCcccc----ccccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCccccCeEEEEeCCCCC
Confidence 99999999999996532211 11111112222 223 3457889999999999999998875534 67665 689
Q ss_pred CCHHHHHHHHHHhCCCCCCCCCCCCC--------CC-----------------CCCCCcc---cChHHHHhh--CCceeC
Q 026418 157 LHRGEVVEILAKFFPEYPIPTKCSDE--------KN-----------------PRKKPYK---FSNQKLKDL--GLEFTP 206 (239)
Q Consensus 157 ~s~~el~~~i~~~~~~~~~~~~~~~~--------~~-----------------~~~~~~~---~~~~k~~~l--g~~p~~ 206 (239)
+|+.|+++.+.+.+ +.+++....+. .. .....+- .+..+++++ +++|++
T Consensus 228 ~s~~e~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~t~ 306 (346)
T 3i6i_A 228 LNINELASVWEKKI-GRTLPRVTVTEDDLLAAAGENIIPQSVVAAFTHDIFIKGCQVNFSIDGPEDVEVTTLYPEDSFRT 306 (346)
T ss_dssp ECHHHHHHHHHHHH-TSCCCEEEECHHHHHHHHHTCCTTHHHHHHHHHHHHTTCTTTSSCCCSTTEEEHHHHSTTCCCCC
T ss_pred CCHHHHHHHHHHHH-CCCCceEecCHHHHHHHHhcCCChhhhHHHHHHHHhccCCCcccccCCCCcccHHHhCCCCCcCc
Confidence 99999999999996 55444321110 00 0000011 111234442 788999
Q ss_pred HHHHHHHHHHHHHHcC
Q 026418 207 VKQCLYETVKSLQEKG 222 (239)
Q Consensus 207 ~~e~i~~~~~~~~~~g 222 (239)
++|.|++.++|+.++.
T Consensus 307 ~~e~l~~~~~~~~~~~ 322 (346)
T 3i6i_A 307 VEECFGEYIVKMEEKQ 322 (346)
T ss_dssp HHHHHHHHHCC-----
T ss_pred HHHHHHHHHHHhhccc
Confidence 9999999999987654
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=8.8e-17 Score=125.72 Aligned_cols=129 Identities=15% Similarity=0.038 Sum_probs=102.6
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+++|+.|+.+++++|++.+++++||+||. .+|+..... .+++|+.+ ..|.+.|+.+|..+|.+++.++++.
T Consensus 84 ~~~N~~g~~~l~~a~~~~~~~~iv~~SS~-~~~g~~~~~--~~~~e~~~------~~~~~~Y~~sK~~~e~~~~~~a~~~ 154 (267)
T 3rft_A 84 LQGNIIGLYNLYEAARAHGQPRIVFASSN-HTIGYYPQT--ERLGPDVP------ARPDGLYGVSKCFGENLARMYFDKF 154 (267)
T ss_dssp HHHHTHHHHHHHHHHHHTTCCEEEEEEEG-GGGTTSBTT--SCBCTTSC------CCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEEcch-HHhCCCCCC--CCCCCCCC------CCCCChHHHHHHHHHHHHHHHHHHh
Confidence 57899999999999999999999999995 888644322 26777765 3567899999999999999999889
Q ss_pred CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCc-eE-EEecCCCCH
Q 026418 82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASG-RY-LCAESVLHR 159 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~y-~~~~~~~s~ 159 (239)
+++++++||+.++|+... +....+++|++|+++++..++..+..++ ++ ++++++.++
T Consensus 155 g~~~~~vr~~~v~~~~~~---------------------~~~~~~~~~~~d~a~~~~~~~~~~~~~~~~~~~~s~~~~~~ 213 (267)
T 3rft_A 155 GQETALVRIGSCTPEPNN---------------------YRMLSTWFSHDDFVSLIEAVFRAPVLGCPVVWGASANDAGW 213 (267)
T ss_dssp CCCEEEEEECBCSSSCCS---------------------TTHHHHBCCHHHHHHHHHHHHHCSCCCSCEEEECCCCTTCC
T ss_pred CCeEEEEEeecccCCCCC---------------------CCceeeEEcHHHHHHHHHHHHhCCCCCceEEEEeCCCCCCc
Confidence 999999999999987321 1223568999999999999998776655 55 555555444
Q ss_pred H
Q 026418 160 G 160 (239)
Q Consensus 160 ~ 160 (239)
.
T Consensus 214 ~ 214 (267)
T 3rft_A 214 W 214 (267)
T ss_dssp B
T ss_pred c
Confidence 3
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.70 E-value=3.4e-17 Score=125.76 Aligned_cols=131 Identities=16% Similarity=0.162 Sum_probs=100.2
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+++|+.++.+++++|++.++++||++||. ..+.. +..+ .+...|+.+|..+|.+++ ..
T Consensus 104 ~~~n~~~~~~l~~a~~~~~~~~iv~~SS~-~~~~~----------~~~~-------~~~~~Y~~sK~~~e~~~~----~~ 161 (236)
T 3e8x_A 104 ILIDLWGAIKTIQEAEKRGIKRFIMVSSV-GTVDP----------DQGP-------MNMRHYLVAKRLADDELK----RS 161 (236)
T ss_dssp HHTTTHHHHHHHHHHHHHTCCEEEEECCT-TCSCG----------GGSC-------GGGHHHHHHHHHHHHHHH----HS
T ss_pred chhhHHHHHHHHHHHHHcCCCEEEEEecC-CCCCC----------CCCh-------hhhhhHHHHHHHHHHHHH----HC
Confidence 56899999999999999999999999995 43311 1111 246789999999999886 56
Q ss_pred CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCc-eEEEecCCCCHH
Q 026418 82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASG-RYLCAESVLHRG 160 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~y~~~~~~~s~~ 160 (239)
+++++++||+.++|+........ ...+.+.++++|++|+|++++.++.++...| +|++++..+++.
T Consensus 162 gi~~~~lrpg~v~~~~~~~~~~~-------------~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~v~~~~~~~~ 228 (236)
T 3e8x_A 162 SLDYTIVRPGPLSNEESTGKVTV-------------SPHFSEITRSITRHDVAKVIAELVDQQHTIGKTFEVLNGDTPIA 228 (236)
T ss_dssp SSEEEEEEECSEECSCCCSEEEE-------------ESSCSCCCCCEEHHHHHHHHHHHTTCGGGTTEEEEEEECSEEHH
T ss_pred CCCEEEEeCCcccCCCCCCeEEe-------------ccCCCcccCcEeHHHHHHHHHHHhcCccccCCeEEEeCCCcCHH
Confidence 99999999999999854221100 0123345889999999999999998775445 898875579999
Q ss_pred HHHHHHH
Q 026418 161 EVVEILA 167 (239)
Q Consensus 161 el~~~i~ 167 (239)
|+++.++
T Consensus 229 e~~~~i~ 235 (236)
T 3e8x_A 229 KVVEQLG 235 (236)
T ss_dssp HHHHTC-
T ss_pred HHHHHhc
Confidence 9998765
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.5e-16 Score=121.09 Aligned_cols=135 Identities=12% Similarity=0.053 Sum_probs=98.1
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
.++|+.++++++++|++.+ +++|++||.+++|+..... ..+.+|... +.|.+.|+.+|..+|.+ ..+.+..
T Consensus 79 ~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~-~~~~~~~~~------~~~~~~y~~sK~~~e~~-~~~~~~~ 149 (224)
T 3h2s_A 79 GYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGADH-PMILDFPES------AASQPWYDGALYQYYEY-QFLQMNA 149 (224)
T ss_dssp THHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCSS-CGGGGCCGG------GGGSTTHHHHHHHHHHH-HHHTTCT
T ss_pred hhHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCCCc-cccccCCCC------CccchhhHHHHHHHHHH-HHHHhcC
Confidence 3579999999999999999 9999999975666544322 113343322 24578899999999954 5555567
Q ss_pred CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCc-eEEEec
Q 026418 82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASG-RYLCAE 154 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~y~~~~ 154 (239)
+++++++||+.+||++.... .. ........+....+++|++|+|++++.++.++...+ +|++.+
T Consensus 150 ~i~~~ivrp~~v~g~~~~~~-~~--------~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~~~ 214 (224)
T 3h2s_A 150 NVNWIGISPSEAFPSGPATS-YV--------AGKDTLLVGEDGQSHITTGNMALAILDQLEHPTAIRDRIVVRD 214 (224)
T ss_dssp TSCEEEEEECSBCCCCCCCC-EE--------EESSBCCCCTTSCCBCCHHHHHHHHHHHHHSCCCTTSEEEEEE
T ss_pred CCcEEEEcCccccCCCcccC-ce--------ecccccccCCCCCceEeHHHHHHHHHHHhcCccccCCEEEEec
Confidence 99999999999999853221 00 112222345566789999999999999999887656 897774
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.69 E-value=6.7e-17 Score=122.64 Aligned_cols=140 Identities=14% Similarity=0.165 Sum_probs=82.6
Q ss_pred hhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH-Hc
Q 026418 3 EPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV-AR 81 (239)
Q Consensus 3 ~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~ 81 (239)
+.|+.++++++++|++.+++++|++||.+++|+..... +..|+.+ ..|.+.|+.+|..+|.+ ..+.+ ..
T Consensus 77 ~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~---~~~~~~~------~~~~~~y~~~k~~~e~~-~~~~~~~~ 146 (221)
T 3ew7_A 77 EKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGN---TLLESKG------LREAPYYPTARAQAKQL-EHLKSHQA 146 (221)
T ss_dssp TSHHHHHHHHHHHHCSCCSSEEEEECCCC----------------------------CCCSCCHHHHHHHH-HHHHTTTT
T ss_pred chHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCc---cccccCC------CCCHHHHHHHHHHHHHH-HHHHhhcc
Confidence 57999999999999999889999999975666554332 4455443 34567899999999987 33333 67
Q ss_pred CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCc-eEEEec-CCCCH
Q 026418 82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASG-RYLCAE-SVLHR 159 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~y~~~~-~~~s~ 159 (239)
+++++++||+.+||+...... + . ..+...........++|++|+|++++.++.++...| +|++.+ .+.+.
T Consensus 147 gi~~~ivrp~~v~g~~~~~~~------~-~-~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~~~~~~~~ 218 (221)
T 3ew7_A 147 EFSWTYISPSAMFEPGERTGD------Y-Q-IGKDHLLFGSDGNSFISMEDYAIAVLDEIERPNHLNEHFTVAGKLEHHH 218 (221)
T ss_dssp TSCEEEEECSSCCCCC-----------------------------CCCHHHHHHHHHHHHHSCSCTTSEEECCC------
T ss_pred CccEEEEeCcceecCCCccCc------e-E-eccccceecCCCCceEeHHHHHHHHHHHHhCccccCCEEEECCCCcccc
Confidence 999999999999998422110 0 0 112222222223479999999999999999887656 998874 44444
Q ss_pred H
Q 026418 160 G 160 (239)
Q Consensus 160 ~ 160 (239)
.
T Consensus 219 ~ 219 (221)
T 3ew7_A 219 H 219 (221)
T ss_dssp -
T ss_pred c
Confidence 3
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.67 E-value=2e-16 Score=125.66 Aligned_cols=142 Identities=15% Similarity=0.077 Sum_probs=106.1
Q ss_pred hhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHcC
Q 026418 3 EPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVARG 82 (239)
Q Consensus 3 ~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~ 82 (239)
+.|+.++++++++|++.++++||++|+ ..+|+... . .+...|+.+|..+|++++. .|
T Consensus 89 ~~~~~~~~~~~~aa~~~gv~~iv~~S~-~~~~~~~~---------~---------~~~~~y~~sK~~~e~~~~~----~g 145 (299)
T 2wm3_A 89 EQEVKQGKLLADLARRLGLHYVVYSGL-ENIKKLTA---------G---------RLAAAHFDGKGEVEEYFRD----IG 145 (299)
T ss_dssp HHHHHHHHHHHHHHHHHTCSEEEECCC-CCHHHHTT---------T---------SCCCHHHHHHHHHHHHHHH----HT
T ss_pred hHHHHHHHHHHHHHHHcCCCEEEEEcC-ccccccCC---------C---------cccCchhhHHHHHHHHHHH----CC
Confidence 468899999999999999999999888 57774321 1 1246799999999999865 48
Q ss_pred ccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCC--Cc--cCCCCCCceehHHHHHHHHHhhcCCC--CCceEEEecCC
Q 026418 83 VDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSA--KT--YANSVQAYVHVRDVALAHILVYETPS--ASGRYLCAESV 156 (239)
Q Consensus 83 ~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~y~~~~~~ 156 (239)
++++++||+.+||+....... .....+.. .. .++..++++|++|+|++++.++.++. .+.+|+++++.
T Consensus 146 i~~~ilrp~~~~~~~~~~~~~------~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~g~~~~~~g~~ 219 (299)
T 2wm3_A 146 VPMTSVRLPCYFENLLSHFLP------QKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLSTCR 219 (299)
T ss_dssp CCEEEEECCEEGGGGGTTTCC------EECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHHHTTCEEECCSEE
T ss_pred CCEEEEeecHHhhhchhhcCC------cccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChhhhCCeEEEeeecc
Confidence 999999999999974321000 00112321 11 25667889999999999999998642 23489888888
Q ss_pred CCHHHHHHHHHHhCCCCC
Q 026418 157 LHRGEVVEILAKFFPEYP 174 (239)
Q Consensus 157 ~s~~el~~~i~~~~~~~~ 174 (239)
+|+.|+++.+.+.+ +.+
T Consensus 220 ~s~~e~~~~~~~~~-g~~ 236 (299)
T 2wm3_A 220 HTAEEYAALLTKHT-RKV 236 (299)
T ss_dssp ECHHHHHHHHHHHH-SSC
T ss_pred CCHHHHHHHHHHHH-CCC
Confidence 99999999999987 443
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.66 E-value=3.5e-16 Score=123.58 Aligned_cols=176 Identities=18% Similarity=0.192 Sum_probs=115.6
Q ss_pred hhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHcC
Q 026418 3 EPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVARG 82 (239)
Q Consensus 3 ~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~ 82 (239)
..|+.++++++++|++.++++|||+||. + ... ..+ ..+...+..+|..+ +..|
T Consensus 80 ~~~~~~~~~l~~aa~~~gv~~iv~~Ss~-~---~~~---------~~~----------~~~~~~~~~~e~~~----~~~g 132 (289)
T 3e48_A 80 FKRIPEVENLVYAAKQSGVAHIIFIGYY-A---DQH---------NNP----------FHMSPYFGYASRLL----STSG 132 (289)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEEEES-C---CST---------TCC----------STTHHHHHHHHHHH----HHHC
T ss_pred hhhHHHHHHHHHHHHHcCCCEEEEEccc-C---CCC---------CCC----------CccchhHHHHHHHH----HHcC
Confidence 3589999999999999999999999994 2 111 111 01112223444443 3559
Q ss_pred ccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCcc--CCCCCCceehHHHHHHHHHhhcCCCCCc-eEEEecCCCCH
Q 026418 83 VDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY--ANSVQAYVHVRDVALAHILVYETPSASG-RYLCAESVLHR 159 (239)
Q Consensus 83 ~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~y~~~~~~~s~ 159 (239)
++++++||+.++|+. ...+..+..+....+ +++.++++|++|+|++++.++..+...| +|+++++.+|+
T Consensus 133 ~~~~ilrp~~~~~~~--------~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~~~~~s~ 204 (289)
T 3e48_A 133 IDYTYVRMAMYMDPL--------KPYLPELMNMHKLIYPAGDGRINYITRNDIARGVIAIIKNPDTWGKRYLLSGYSYDM 204 (289)
T ss_dssp CEEEEEEECEESTTH--------HHHHHHHHHHTEECCCCTTCEEEEECHHHHHHHHHHHHHCGGGTTCEEEECCEEEEH
T ss_pred CCEEEEecccccccc--------HHHHHHHHHCCCEecCCCCceeeeEEHHHHHHHHHHHHcCCCcCCceEEeCCCcCCH
Confidence 999999999999873 123334433333333 5667889999999999999998775534 89877889999
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCC-------C--CCC------------CCCcccChHHHHh-hCCceeCHHHHHHHH
Q 026418 160 GEVVEILAKFFPEYPIPTKCSDE-------K--NPR------------KKPYKFSNQKLKD-LGLEFTPVKQCLYET 214 (239)
Q Consensus 160 ~el~~~i~~~~~~~~~~~~~~~~-------~--~~~------------~~~~~~~~~k~~~-lg~~p~~~~e~i~~~ 214 (239)
.|+++.+.+.+ +.+++....+. . ... ......+...+++ +|++|+++++.+++.
T Consensus 205 ~e~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~p~~~~~~~~~~ 280 (289)
T 3e48_A 205 KELAAILSEAS-GTEIKYEPVSLETFAEMYDEPKGFGALLASMYHAGARGLLDQESNDFKQLVNDQPQTLQSFLQEN 280 (289)
T ss_dssp HHHHHHHHHHH-TSCCEECCCCHHHHHHHTCCSTTHHHHHHHHHHHHHTTTTCCCCSHHHHHHSSCCCCHHHHHHC-
T ss_pred HHHHHHHHHHH-CCceeEEeCCHHHHHHHhcCCccHHHHHHHHHHHHHCCCccccCchHHHHhCCCCCCHHHHHHHH
Confidence 99999999997 44433222110 0 000 0112233445555 799999998877664
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=5.8e-16 Score=119.72 Aligned_cols=140 Identities=18% Similarity=0.094 Sum_probs=101.0
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+++|+.++.+++++|++.++++||++||. +++.... +.. ......|+.+|..+|.+++. .
T Consensus 106 ~~~n~~~~~~l~~~~~~~~~~~iv~~SS~-~~~~~~~-----~~~----------~~~~~~y~~sK~~~e~~~~~----~ 165 (253)
T 1xq6_A 106 EQVDWIGQKNQIDAAKVAGVKHIVVVGSM-GGTNPDH-----PLN----------KLGNGNILVWKRKAEQYLAD----S 165 (253)
T ss_dssp HHHTTHHHHHHHHHHHHHTCSEEEEEEET-TTTCTTC-----GGG----------GGGGCCHHHHHHHHHHHHHT----S
T ss_pred eeeeHHHHHHHHHHHHHcCCCEEEEEcCc-cCCCCCC-----ccc----------cccchhHHHHHHHHHHHHHh----C
Confidence 47899999999999999999999999995 5542110 110 01124588899999998753 6
Q ss_pred CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCc-eEEEec----CC
Q 026418 82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASG-RYLCAE----SV 156 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~y~~~~----~~ 156 (239)
+++++++||+.+||+..... .+..+.......+...++|++|+|++++.++.++...+ +|++++ ++
T Consensus 166 ~i~~~~vrpg~v~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~~~ 236 (253)
T 1xq6_A 166 GTPYTIIRAGGLLDKEGGVR---------ELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTS 236 (253)
T ss_dssp SSCEEEEEECEEECSCSSSS---------CEEEESTTGGGGSSCCEEEHHHHHHHHHHHTTCGGGTTEEEEEEECCTTTS
T ss_pred CCceEEEecceeecCCcchh---------hhhccCCcCCcCCCCcEEcHHHHHHHHHHHHcCccccCCEEEecCCCcCCC
Confidence 89999999999999864311 01111111111234679999999999999998765444 898773 35
Q ss_pred CCHHHHHHHHHHhC
Q 026418 157 LHRGEVVEILAKFF 170 (239)
Q Consensus 157 ~s~~el~~~i~~~~ 170 (239)
+|+.|+++.+.+.+
T Consensus 237 ~s~~e~~~~~~~~~ 250 (253)
T 1xq6_A 237 TPTKDFKALFSQVT 250 (253)
T ss_dssp CCCCCHHHHHHTCC
T ss_pred CCHHHHHHHHHHHh
Confidence 89999999999886
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.63 E-value=2.7e-16 Score=118.82 Aligned_cols=122 Identities=16% Similarity=0.084 Sum_probs=91.3
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+++|+.++.+++++|++.++++|||+||. .+|+. +.+.|+.+|..+|.+++. .
T Consensus 87 ~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~-~~~~~----------------------~~~~y~~sK~~~e~~~~~----~ 139 (215)
T 2a35_A 87 RAVDFDLPLAVGKRALEMGARHYLVVSAL-GADAK----------------------SSIFYNRVKGELEQALQE----Q 139 (215)
T ss_dssp HHHHTHHHHHHHHHHHHTTCCEEEEECCT-TCCTT----------------------CSSHHHHHHHHHHHHHTT----S
T ss_pred HHhhHHHHHHHHHHHHHcCCCEEEEECCc-ccCCC----------------------CccHHHHHHHHHHHHHHH----c
Confidence 47899999999999999999999999995 77631 246799999999998864 4
Q ss_pred Ccc-EEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCceEEEe-cCCCC
Q 026418 82 GVD-LVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCA-ESVLH 158 (239)
Q Consensus 82 ~~~-~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~s 158 (239)
+++ ++++||+.+||+..... ++..+. +....++++.++++|++|+|++++.++.++. +++|+++ ++.++
T Consensus 140 ~~~~~~~vrp~~v~g~~~~~~------~~~~~~-~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~-~~~~~i~~~~~~~ 210 (215)
T 2a35_A 140 GWPQLTIARPSLLFGPREEFR------LAEILA-APIARILPGKYHGIEACDLARALWRLALEEG-KGVRFVESDELRK 210 (215)
T ss_dssp CCSEEEEEECCSEESTTSCEE------GGGGTT-CCCC----CHHHHHHHHHHHHHHHHHHTCCC-SEEEEEEHHHHHH
T ss_pred CCCeEEEEeCceeeCCCCcch------HHHHHH-HhhhhccCCCcCcEeHHHHHHHHHHHHhcCC-CCceEEcHHHHHH
Confidence 899 99999999999975421 111111 2222233446789999999999999998765 5699887 44433
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=5.3e-15 Score=120.07 Aligned_cols=143 Identities=14% Similarity=0.129 Sum_probs=102.2
Q ss_pred hhHhHHHHHHHHHHHhcC-CCEEEEccchh-hhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHH
Q 026418 3 EPAVIGTKNVIVAAAEAK-VRRVVFTSSIG-AVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA 80 (239)
Q Consensus 3 ~~Nv~~t~~ll~a~~~~~-v~~~i~~Ss~~-~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 80 (239)
+.|..+ ++++++|++.+ +++|||+||.+ ..|+. .+...|+.+|..+|++++.
T Consensus 87 ~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~~---------------------~~~~~y~~sK~~~E~~~~~---- 140 (352)
T 1xgk_A 87 DEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLYGP---------------------WPAVPMWAPKFTVENYVRQ---- 140 (352)
T ss_dssp CHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGTSS---------------------CCCCTTTHHHHHHHHHHHT----
T ss_pred HHHHHH-HHHHHHHHHcCCccEEEEeCCccccccCC---------------------CCCccHHHHHHHHHHHHHH----
Confidence 357776 99999999999 99999999952 13311 1246799999999999865
Q ss_pred cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCC----ccCCCCCCceeh-HHHHHHHHHhhcCCC---CCceEEE
Q 026418 81 RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAK----TYANSVQAYVHV-RDVALAHILVYETPS---ASGRYLC 152 (239)
Q Consensus 81 ~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~i~v-~D~a~~~~~~~~~~~---~~~~y~~ 152 (239)
.+++++++||+ +||++......... ......++... ..+++.++++|+ +|+|++++.++.++. .+++|++
T Consensus 141 ~gi~~~ivrpg-~~g~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~~~g~~~~l 218 (352)
T 1xgk_A 141 LGLPSTFVYAG-IYNNNFTSLPYPLF-QMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIAL 218 (352)
T ss_dssp SSSCEEEEEEC-EEGGGCBSSSCSSC-BEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEE
T ss_pred cCCCEEEEecc-eecCCchhcccccc-cccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchhhCCeEEEE
Confidence 48999999976 68876432211000 00001233321 125677889999 899999999997642 3459999
Q ss_pred ecCCCCHHHHHHHHHHhCCCCC
Q 026418 153 AESVLHRGEVVEILAKFFPEYP 174 (239)
Q Consensus 153 ~~~~~s~~el~~~i~~~~~~~~ 174 (239)
+++.+|+.|+++.+.+.+ +.+
T Consensus 219 ~~~~~s~~e~~~~i~~~~-G~~ 239 (352)
T 1xgk_A 219 TFETLSPVQVCAAFSRAL-NRR 239 (352)
T ss_dssp CSEEECHHHHHHHHHHHH-TSC
T ss_pred ecCCCCHHHHHHHHHHHH-CCC
Confidence 888899999999999987 443
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.47 E-value=5.6e-13 Score=102.38 Aligned_cols=122 Identities=16% Similarity=0.042 Sum_probs=89.7
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+++|+.++.++++++++.+++++|++||. ++|+. +...|+.+|...|.+++. .
T Consensus 105 ~~~n~~~~~~~~~~~~~~~~~~iv~~SS~-~~~~~----------------------~~~~Y~~sK~~~e~~~~~----~ 157 (242)
T 2bka_A 105 VRVDRDYVLKSAELAKAGGCKHFNLLSSK-GADKS----------------------SNFLYLQVKGEVEAKVEE----L 157 (242)
T ss_dssp HHHHTHHHHHHHHHHHHTTCCEEEEECCT-TCCTT----------------------CSSHHHHHHHHHHHHHHT----T
T ss_pred eeeeHHHHHHHHHHHHHCCCCEEEEEccC-cCCCC----------------------CcchHHHHHHHHHHHHHh----c
Confidence 56899999999999999999999999995 76631 246799999999998854 4
Q ss_pred Cc-cEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCceEEEec
Q 026418 82 GV-DLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCAE 154 (239)
Q Consensus 82 ~~-~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~~ 154 (239)
++ +++++||+.++|+..... .............+..++ ...+++++|+|++++.++.++...+.|++++
T Consensus 158 ~~~~~~~vrpg~v~~~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~ 227 (242)
T 2bka_A 158 KFDRYSVFRPGVLLCDRQESR--PGEWLVRKFFGSLPDSWA--SGHSVPVVTVVRAMLNNVVRPRDKQMELLEN 227 (242)
T ss_dssp CCSEEEEEECCEEECTTGGGS--HHHHHHHHHHCSCCTTGG--GGTEEEHHHHHHHHHHHHTSCCCSSEEEEEH
T ss_pred CCCCeEEEcCceecCCCCCCc--HHHHHHHHhhcccCcccc--CCcccCHHHHHHHHHHHHhCccccCeeEeeH
Confidence 78 599999999999864321 111222333333222222 2359999999999999998776666777653
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=9.1e-13 Score=98.55 Aligned_cols=118 Identities=17% Similarity=0.171 Sum_probs=86.0
Q ss_pred hhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHcC
Q 026418 3 EPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVARG 82 (239)
Q Consensus 3 ~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~ 82 (239)
++|+.++.+++++|++.++++||++||. ++|+..... + .+...|+.+|..+|.+++ +.+
T Consensus 85 ~~n~~~~~~~~~~~~~~~~~~~v~~Ss~-~~~~~~~~~---~-------------~~~~~y~~~K~~~e~~~~----~~~ 143 (206)
T 1hdo_A 85 TVMSEGARNIVAAMKAHGVDKVVACTSA-FLLWDPTKV---P-------------PRLQAVTDDHIRMHKVLR----ESG 143 (206)
T ss_dssp CHHHHHHHHHHHHHHHHTCCEEEEECCG-GGTSCTTCS---C-------------GGGHHHHHHHHHHHHHHH----HTC
T ss_pred chHHHHHHHHHHHHHHhCCCeEEEEeee-eeccCcccc---c-------------ccchhHHHHHHHHHHHHH----hCC
Confidence 5799999999999999999999999995 888643321 1 136789999999999884 458
Q ss_pred ccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCc-eEEEec
Q 026418 83 VDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASG-RYLCAE 154 (239)
Q Consensus 83 ~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~y~~~~ 154 (239)
++++++||+.+ ++......... ...+. +. .+++|++|+|++++.++.++...| +|++++
T Consensus 144 i~~~~lrp~~~-~~~~~~~~~~~------~~~~~----~~--~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~ 203 (206)
T 1hdo_A 144 LKYVAVMPPHI-GDQPLTGAYTV------TLDGR----GP--SRVISKHDLGHFMLRCLTTDEYDGHSTYPSH 203 (206)
T ss_dssp SEEEEECCSEE-ECCCCCSCCEE------ESSSC----SS--CSEEEHHHHHHHHHHTTSCSTTTTCEEEEEC
T ss_pred CCEEEEeCCcc-cCCCCCcceEe------cccCC----CC--CCccCHHHHHHHHHHHhcCccccccceeeec
Confidence 99999999998 33221110000 00111 11 589999999999999998876545 888774
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=4.3e-12 Score=99.46 Aligned_cols=144 Identities=20% Similarity=0.185 Sum_probs=103.2
Q ss_pred chhHhHHHHHHHHHHHhc----CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++.+. +..++|++||. ..|.... .+...|+.+|...|.+++.+
T Consensus 122 ~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~-~~~~~~~-------------------~~~~~Y~~sK~a~~~~~~~l 181 (278)
T 2bgk_A 122 MDINVYGAFLVAKHAARVMIPAKKGSIVFTASI-SSFTAGE-------------------GVSHVYTATKHAVLGLTTSL 181 (278)
T ss_dssp HHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCG-GGTCCCT-------------------TSCHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeec-cccCCCC-------------------CCCcchHHHHHHHHHHHHHH
Confidence 578999999999998763 56799999995 6553211 13567999999999999988
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eEE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYL 151 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y~ 151 (239)
+.+ .|++++++||+.++++............+..+....+ .....+++++|+|++++.++... ...| +|+
T Consensus 182 a~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~ 257 (278)
T 2bgk_A 182 CTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAA----NLKGTLLRAEDVADAVAYLAGDESKYVSGLNLV 257 (278)
T ss_dssp HHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTC----SSCSCCCCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhccc----ccccccCCHHHHHHHHHHHcCcccccCCCCEEE
Confidence 765 5899999999999998644322111222222222211 12346899999999999988643 2335 777
Q ss_pred Ee-cCCCCHHHHHHHHHHh
Q 026418 152 CA-ESVLHRGEVVEILAKF 169 (239)
Q Consensus 152 ~~-~~~~s~~el~~~i~~~ 169 (239)
+. |..+++.|+++.+.+.
T Consensus 258 v~gg~~~~~~e~~~~i~~~ 276 (278)
T 2bgk_A 258 IDGGYTRTNPAFPTALKHG 276 (278)
T ss_dssp ESTTGGGCCTHHHHHSCSC
T ss_pred ECCcccccCCccchhhhhh
Confidence 76 6789999999988764
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.35 E-value=2.2e-12 Score=101.42 Aligned_cols=147 Identities=18% Similarity=0.055 Sum_probs=95.2
Q ss_pred chhHhHH----HHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIG----TKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~----t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.| ++.++..+++.+..++|++||.++.++ . .+...|+.+|...|.+++.+
T Consensus 107 ~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-~--------------------~~~~~Y~~sK~a~~~~~~~l 165 (281)
T 3m1a_A 107 FELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLS-F--------------------AGFSAYSATKAALEQLSEGL 165 (281)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC-C--------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCC-C--------------------CCchHHHHHHHHHHHHHHHH
Confidence 5789999 666666667777889999999633221 1 23678999999999999998
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCC----hhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCceE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVN----ASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRY 150 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y 150 (239)
+.+ .|+++.+++|+.+.++....... ....+..................+.+++|+|++++.++..+..+++|
T Consensus 166 a~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~~~~~~~~ 245 (281)
T 3m1a_A 166 ADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPAKAAAAIRLALDTEKTPLRL 245 (281)
T ss_dssp HHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----CBCHHHHHHHHHHHHHSSSCCSEE
T ss_pred HHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccCCCCCCHHHHHHHHHHHHhCCCCCeEE
Confidence 877 68999999999998765322110 00011111111111111122356888999999999999987766678
Q ss_pred EEe-cCCCCHHHHHHHHHHh
Q 026418 151 LCA-ESVLHRGEVVEILAKF 169 (239)
Q Consensus 151 ~~~-~~~~s~~el~~~i~~~ 169 (239)
+++ +....+.+....+.+.
T Consensus 246 ~l~s~~~~~i~g~~~~i~~~ 265 (281)
T 3m1a_A 246 ALGGDAVDFLTGHLDSVRAE 265 (281)
T ss_dssp EESHHHHHHHHHHHHHHHHH
T ss_pred ecCchHHHHHHHHHHHHHHH
Confidence 776 4444555555555544
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.33 E-value=8e-13 Score=105.36 Aligned_cols=145 Identities=16% Similarity=0.140 Sum_probs=96.8
Q ss_pred hHhHHHHHHHHHHHhcC-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccC-CchHHHHHHHHHHHHHHHHHHc
Q 026418 4 PAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNT-KNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 4 ~Nv~~t~~ll~a~~~~~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~-~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
.|+.++++++++|++++ +++||+ |+ ||..... . +.+ ..| ...| .+|..+|++++ +.
T Consensus 91 ~~~~~~~~l~~aa~~~g~v~~~v~-S~----~g~~~~~---~---~~~------~~p~~~~y-~sK~~~e~~~~----~~ 148 (313)
T 1qyd_A 91 HHILEQLKLVEAIKEAGNIKRFLP-SE----FGMDPDI---M---EHA------LQPGSITF-IDKRKVRRAIE----AA 148 (313)
T ss_dssp TTTTTHHHHHHHHHHSCCCSEEEC-SC----CSSCTTS---C---CCC------CSSTTHHH-HHHHHHHHHHH----HT
T ss_pred hhHHHHHHHHHHHHhcCCCceEEe-cC----CcCCccc---c---ccC------CCCCcchH-HHHHHHHHHHH----hc
Confidence 37889999999999999 999996 43 3322111 1 111 123 4568 99999999885 45
Q ss_pred CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCC-Ccc--CCCCCCceehHHHHHHHHHhhcCCCCCc-eEEE-e-cC
Q 026418 82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSA-KTY--ANSVQAYVHVRDVALAHILVYETPSASG-RYLC-A-ES 155 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~y~~-~-~~ 155 (239)
+++++++||+.++|+......... . .....+.. ..+ ++..++++|++|+|++++.++.++...+ +|++ + ++
T Consensus 149 g~~~~ilrp~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~ 225 (313)
T 1qyd_A 149 SIPYTYVSSNMFAGYFAGSLAQLD-G--HMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMN 225 (313)
T ss_dssp TCCBCEEECCEEHHHHTTTSSCTT-C--CSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGG
T ss_pred CCCeEEEEeceecccccccccccc-c--cccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCcccCCceEEEeCCCC
Confidence 899999999999885321100000 0 00012222 223 3456789999999999999998765434 5654 4 47
Q ss_pred CCCHHHHHHHHHHhCCCCC
Q 026418 156 VLHRGEVVEILAKFFPEYP 174 (239)
Q Consensus 156 ~~s~~el~~~i~~~~~~~~ 174 (239)
.+|+.|+++.+.+.+ +.+
T Consensus 226 ~~s~~e~~~~~~~~~-g~~ 243 (313)
T 1qyd_A 226 ILSQKEVIQIWERLS-EQN 243 (313)
T ss_dssp EEEHHHHHHHHHHHH-TCC
T ss_pred ccCHHHHHHHHHHhc-CCC
Confidence 899999999999987 443
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.33 E-value=2.4e-13 Score=105.11 Aligned_cols=149 Identities=23% Similarity=0.118 Sum_probs=92.8
Q ss_pred chhHhHHHHHHHHHHHhc----CCCEEEEccchhhhccCCCCCCCccccCC-------CCCCh-hhcccCCchHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----KVRRVVFTSSIGAVYMDPNRSPDDVVDES-------CWSDL-EFCKNTKNWYCYGKAV 69 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~-------~~~~~-~~~~~~~~~Y~~sK~~ 69 (239)
+++|+.++.++++++.+. +.+++|++||. +.|+..... .+..|. .+... +....+...|+.+|.+
T Consensus 83 ~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 159 (255)
T 2dkn_A 83 VAVNYFGVSALLDGLAEALSRGQQPAAVIVGSI-AATQPGAAE--LPMVEAMLAGDEARAIELAEQQGQTHLAYAGSKYA 159 (255)
T ss_dssp HHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCG-GGGSTTGGG--CHHHHHHHHTCHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHhhhcCCceEEEEecc-ccccccccc--cchhhhhcccchhhhhhhccccCCcchhHHHHHHH
Confidence 578999999999988764 56899999995 666543211 011111 00000 0001245679999999
Q ss_pred HHHHHHHHHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--
Q 026418 70 AEKAAWEEAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP-- 144 (239)
Q Consensus 70 ~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~-- 144 (239)
.|.+++.++++ .|++++++||+.++|+...... ............ .+ ...++++++|+|++++.++..+
T Consensus 160 ~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~--~~~~~~~~~~~~---~~-~~~~~~~~~dva~~~~~l~~~~~~ 233 (255)
T 2dkn_A 160 VTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASK--ADPRYGESTRRF---VA-PLGRGSEPREVAEAIAFLLGPQAS 233 (255)
T ss_dssp HHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHH--HCTTTHHHHHSC---CC-TTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcc--cchhhHHHHHHH---HH-HhcCCCCHHHHHHHHHHHhCCCcc
Confidence 99999988765 6899999999999987321000 000000111100 01 3457999999999999999765
Q ss_pred CCCc-eEEEe-cCCCCH
Q 026418 145 SASG-RYLCA-ESVLHR 159 (239)
Q Consensus 145 ~~~~-~y~~~-~~~~s~ 159 (239)
...| +|+++ |..+++
T Consensus 234 ~~~G~~~~v~gg~~~~~ 250 (255)
T 2dkn_A 234 FIHGSVLFVDGGMDALM 250 (255)
T ss_dssp TCCSCEEEESTTHHHHH
T ss_pred cceeeEEEecCCeEeee
Confidence 2334 78877 444443
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.25 E-value=1.2e-11 Score=92.69 Aligned_cols=109 Identities=17% Similarity=0.085 Sum_probs=84.1
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHH-
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA- 80 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 80 (239)
+++|+.++.++++++++.+..++|++||. ..|... .+...|+.+|...|.+++.++.+
T Consensus 94 ~~~n~~~~~~l~~~~~~~~~~~iv~~sS~-~~~~~~--------------------~~~~~Y~~sK~a~~~~~~~~~~~~ 152 (207)
T 2yut_A 94 LAAHLLTAAFVLKHARFQKGARAVFFGAY-PRYVQV--------------------PGFAAYAAAKGALEAYLEAARKEL 152 (207)
T ss_dssp HHHHHHHHHHHHHHCCEEEEEEEEEECCC-HHHHSS--------------------TTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHhcCCcEEEEEcCh-hhccCC--------------------CCcchHHHHHHHHHHHHHHHHHHH
Confidence 57899999999999977677899999995 655321 23578999999999999998776
Q ss_pred --cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCceE
Q 026418 81 --RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRY 150 (239)
Q Consensus 81 --~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y 150 (239)
.|++++++||+.++++... + .+.....+++++|+|++++.++..+..+.++
T Consensus 153 ~~~gi~v~~v~pg~v~t~~~~---------------~----~~~~~~~~~~~~dva~~~~~~~~~~~~~~~~ 205 (207)
T 2yut_A 153 LREGVHLVLVRLPAVATGLWA---------------P----LGGPPKGALSPEEAARKVLEGLFREPVPALL 205 (207)
T ss_dssp HTTTCEEEEECCCCBCSGGGG---------------G----GTSCCTTCBCHHHHHHHHHHHHC--CCCSCC
T ss_pred hhhCCEEEEEecCcccCCCcc---------------c----cCCCCCCCCCHHHHHHHHHHHHhCCCCcccc
Confidence 5899999999999987410 0 0122367999999999999999876554443
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.21 E-value=9e-12 Score=99.00 Aligned_cols=142 Identities=20% Similarity=0.206 Sum_probs=95.1
Q ss_pred hHHHHHHHHHHHhcC-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccC-CchHHHHHHHHHHHHHHHHHHcCc
Q 026418 6 VIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNT-KNWYCYGKAVAEKAAWEEAVARGV 83 (239)
Q Consensus 6 v~~t~~ll~a~~~~~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~-~~~Y~~sK~~~E~~~~~~~~~~~~ 83 (239)
+.++++++++|++++ +++||+ |+ ||.. .+|..+. .| ...| .+|..+|+++++ .++
T Consensus 90 ~~~~~~l~~aa~~~g~v~~~v~-S~----~g~~-------~~~~~~~------~p~~~~y-~sK~~~e~~~~~----~~~ 146 (308)
T 1qyc_A 90 IESQVNIIKAIKEVGTVKRFFP-SE----FGND-------VDNVHAV------EPAKSVF-EVKAKVRRAIEA----EGI 146 (308)
T ss_dssp SGGGHHHHHHHHHHCCCSEEEC-SC----CSSC-------TTSCCCC------TTHHHHH-HHHHHHHHHHHH----HTC
T ss_pred hhhHHHHHHHHHhcCCCceEee-cc----cccC-------ccccccC------CcchhHH-HHHHHHHHHHHh----cCC
Confidence 567899999999998 999984 44 3321 1222221 22 3468 999999988864 489
Q ss_pred cEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCC-cc--CCCCCCceehHHHHHHHHHhhcCCCCCc-eEEEe--cCCC
Q 026418 84 DLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAK-TY--ANSVQAYVHVRDVALAHILVYETPSASG-RYLCA--ESVL 157 (239)
Q Consensus 84 ~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~y~~~--~~~~ 157 (239)
+++++||+.++|+........ ......+... .+ ++..++++|++|+|++++.++.++...+ +|++. ++.+
T Consensus 147 ~~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~ 222 (308)
T 1qyc_A 147 PYTYVSSNCFAGYFLRSLAQA----GLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTL 222 (308)
T ss_dssp CBEEEECCEEHHHHTTTTTCT----TCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEE
T ss_pred CeEEEEeceeccccccccccc----cccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCccccCeEEEEeCCCCcc
Confidence 999999999988532211000 0001112221 23 3456789999999999999998765434 66554 4789
Q ss_pred CHHHHHHHHHHhCCCCCC
Q 026418 158 HRGEVVEILAKFFPEYPI 175 (239)
Q Consensus 158 s~~el~~~i~~~~~~~~~ 175 (239)
|+.|+++.+.+.+ +.++
T Consensus 223 s~~e~~~~~~~~~-g~~~ 239 (308)
T 1qyc_A 223 SLNELVALWEKKI-DKTL 239 (308)
T ss_dssp EHHHHHHHHHHHT-TSCC
T ss_pred CHHHHHHHHHHHh-CCCC
Confidence 9999999999997 5443
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.21 E-value=1e-11 Score=99.29 Aligned_cols=138 Identities=15% Similarity=0.099 Sum_probs=93.7
Q ss_pred hHHHHHHHHHHHhcC-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccC-CchHHHHHHHHHHHHHHHHHHcCc
Q 026418 6 VIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNT-KNWYCYGKAVAEKAAWEEAVARGV 83 (239)
Q Consensus 6 v~~t~~ll~a~~~~~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~-~~~Y~~sK~~~E~~~~~~~~~~~~ 83 (239)
+.++++++++|++.+ +++||+ |+ ||.. .+|..+. .| ...| .+|..+|+++++ .++
T Consensus 92 ~~~~~~l~~aa~~~g~v~~~v~-S~----~g~~-------~~~~~~~------~p~~~~y-~sK~~~e~~~~~----~~~ 148 (318)
T 2r6j_A 92 ILDQFKILEAIKVAGNIKRFLP-SD----FGVE-------EDRINAL------PPFEALI-ERKRMIRRAIEE----ANI 148 (318)
T ss_dssp STTHHHHHHHHHHHCCCCEEEC-SC----CSSC-------TTTCCCC------HHHHHHH-HHHHHHHHHHHH----TTC
T ss_pred hHHHHHHHHHHHhcCCCCEEEe-ec----cccC-------cccccCC------CCcchhH-HHHHHHHHHHHh----cCC
Confidence 567899999999998 999985 43 3321 1222221 12 3468 999999988854 589
Q ss_pred cEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCc-cC--CCCCCceehHHHHHHHHHhhcCCCCCc-eEEE-e-cCCC
Q 026418 84 DLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKT-YA--NSVQAYVHVRDVALAHILVYETPSASG-RYLC-A-ESVL 157 (239)
Q Consensus 84 ~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~i~v~D~a~~~~~~~~~~~~~~-~y~~-~-~~~~ 157 (239)
+++++||+.+++.. ....+.....+.... ++ +..++++|++|+|++++.++.++...+ +|++ + ++.+
T Consensus 149 ~~~~lr~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~ 221 (318)
T 2r6j_A 149 PYTYVSANCFASYF-------INYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNII 221 (318)
T ss_dssp CBEEEECCEEHHHH-------HHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEE
T ss_pred CeEEEEcceehhhh-------hhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCccccCeEEEecCCCCcc
Confidence 99999998887531 111111112222222 33 456789999999999999998765434 5554 4 5789
Q ss_pred CHHHHHHHHHHhCCCCC
Q 026418 158 HRGEVVEILAKFFPEYP 174 (239)
Q Consensus 158 s~~el~~~i~~~~~~~~ 174 (239)
|+.|+++.+.+.+ +.+
T Consensus 222 s~~e~~~~~~~~~-g~~ 237 (318)
T 2r6j_A 222 TQLELISRWEKKI-GKK 237 (318)
T ss_dssp EHHHHHHHHHHHH-TCC
T ss_pred CHHHHHHHHHHHh-CCC
Confidence 9999999999986 443
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.20 E-value=1.3e-11 Score=98.68 Aligned_cols=137 Identities=12% Similarity=0.070 Sum_probs=94.4
Q ss_pred hHHHHHHHHHHHhcC-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccC-CchHHHHHHHHHHHHHHHHHHcCc
Q 026418 6 VIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNT-KNWYCYGKAVAEKAAWEEAVARGV 83 (239)
Q Consensus 6 v~~t~~ll~a~~~~~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~-~~~Y~~sK~~~E~~~~~~~~~~~~ 83 (239)
+.++++++++|++.+ +++||+ |+ ||.. .+|..+. .| ...| .+|..+|.+++. .++
T Consensus 90 ~~~~~~l~~aa~~~g~v~~~v~-S~----~g~~-------~~~~~~~------~p~~~~y-~sK~~~e~~~~~----~~~ 146 (321)
T 3c1o_A 90 ISSQIHIINAIKAAGNIKRFLP-SD----FGCE-------EDRIKPL------PPFESVL-EKKRIIRRAIEA----AAL 146 (321)
T ss_dssp SGGGHHHHHHHHHHCCCCEEEC-SC----CSSC-------GGGCCCC------HHHHHHH-HHHHHHHHHHHH----HTC
T ss_pred hhhHHHHHHHHHHhCCccEEec-cc----cccC-------ccccccC------CCcchHH-HHHHHHHHHHHH----cCC
Confidence 567899999999999 999983 33 3321 1232221 12 3569 999999998853 489
Q ss_pred cEEEEecCcccCCCCCCCCChhHHHHHH----HHcCCCC-cc--CCCCCCceehHHHHHHHHHhhcCCCCCc-eEEEe--
Q 026418 84 DLVVVNPVLVLGPLLQSTVNASIIHILK----YLNGSAK-TY--ANSVQAYVHVRDVALAHILVYETPSASG-RYLCA-- 153 (239)
Q Consensus 84 ~~~i~Rp~~v~G~~~~~~~~~~~~~~~~----~~~~~~~-~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~y~~~-- 153 (239)
+++++||+.++|+.. ..+.. ...+... .+ ++..++++|++|+|++++.++.++...+ +|++.
T Consensus 147 ~~~~lrp~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~g~ 218 (321)
T 3c1o_A 147 PYTYVSANCFGAYFV--------NYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPRCCNRIVIYRPP 218 (321)
T ss_dssp CBEEEECCEEHHHHH--------HHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHCGGGTTEEEECCCG
T ss_pred CeEEEEeceeccccc--------cccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHhCccccCeEEEEeCC
Confidence 999999999887521 11111 1122222 23 3456789999999999999998765444 66554
Q ss_pred cCCCCHHHHHHHHHHhCCCCC
Q 026418 154 ESVLHRGEVVEILAKFFPEYP 174 (239)
Q Consensus 154 ~~~~s~~el~~~i~~~~~~~~ 174 (239)
++.+|+.|+++.+.+.+ +.+
T Consensus 219 ~~~~t~~e~~~~~~~~~-g~~ 238 (321)
T 3c1o_A 219 KNIISQNELISLWEAKS-GLS 238 (321)
T ss_dssp GGEEEHHHHHHHHHHHH-TSC
T ss_pred CCcccHHHHHHHHHHHc-CCc
Confidence 57899999999999986 443
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.19 E-value=1.3e-11 Score=98.09 Aligned_cols=142 Identities=18% Similarity=0.133 Sum_probs=94.4
Q ss_pred hHHHHHHHHHHHhcC-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccC-CchHHHHHHHHHHHHHHHHHHcCc
Q 026418 6 VIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNT-KNWYCYGKAVAEKAAWEEAVARGV 83 (239)
Q Consensus 6 v~~t~~ll~a~~~~~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~-~~~Y~~sK~~~E~~~~~~~~~~~~ 83 (239)
+.++++++++|++.+ +++||+ |+ ||.. .+|..+ ..| ...| .+|..+|++++. .++
T Consensus 89 ~~~~~~l~~aa~~~g~v~~~v~-S~----~g~~-------~~~~~~------~~p~~~~y-~sK~~~e~~~~~----~~i 145 (307)
T 2gas_A 89 IEDQVKIIKAIKEAGNVKKFFP-SE----FGLD-------VDRHDA------VEPVRQVF-EEKASIRRVIEA----EGV 145 (307)
T ss_dssp GGGHHHHHHHHHHHCCCSEEEC-SC----CSSC-------TTSCCC------CTTHHHHH-HHHHHHHHHHHH----HTC
T ss_pred cccHHHHHHHHHhcCCceEEee-cc----cccC-------cccccC------CCcchhHH-HHHHHHHHHHHH----cCC
Confidence 567899999999998 999984 43 3321 122221 122 3568 999999988854 489
Q ss_pred cEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCC-ccC--CCCCCceehHHHHHHHHHhhcCCCCCc-eEEE-e-cCCC
Q 026418 84 DLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAK-TYA--NSVQAYVHVRDVALAHILVYETPSASG-RYLC-A-ESVL 157 (239)
Q Consensus 84 ~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~i~v~D~a~~~~~~~~~~~~~~-~y~~-~-~~~~ 157 (239)
+++++||+.++++........ ......+... .++ +..++++|++|+|++++.++.++...+ +|++ + ++.+
T Consensus 146 ~~~~lrp~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~ 221 (307)
T 2gas_A 146 PYTYLCCHAFTGYFLRNLAQL----DATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPKNYL 221 (307)
T ss_dssp CBEEEECCEETTTTGGGTTCT----TCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCGGGTTEEEECCCGGGEE
T ss_pred CeEEEEcceeecccccccccc----ccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCccccCceEEEeCCCCcC
Confidence 999999999987532110000 0001112221 233 446789999999999999998765434 5544 4 4789
Q ss_pred CHHHHHHHHHHhCCCCCC
Q 026418 158 HRGEVVEILAKFFPEYPI 175 (239)
Q Consensus 158 s~~el~~~i~~~~~~~~~ 175 (239)
|+.|+++.+.+.+ +.++
T Consensus 222 s~~e~~~~~~~~~-g~~~ 238 (307)
T 2gas_A 222 TQNEVIALWEKKI-GKTL 238 (307)
T ss_dssp EHHHHHHHHHHHH-TSCC
T ss_pred CHHHHHHHHHHHh-CCCC
Confidence 9999999999996 4443
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=9.2e-11 Score=93.01 Aligned_cols=142 Identities=13% Similarity=0.003 Sum_probs=95.6
Q ss_pred chhHhHHHHHHHHHHHh-----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE-----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~-----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++.++++++.+ .+..++|++||. ..+... .+...|+.+|...|.+++.
T Consensus 132 ~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~-~~~~~~--------------------~~~~~Y~~sK~a~~~~~~~ 190 (302)
T 1w6u_A 132 TDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTI-YAETGS--------------------GFVVPSASAKAGVEAMSKS 190 (302)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCT-HHHHCC--------------------TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEccc-ccccCC--------------------CCcchhHHHHHHHHHHHHH
Confidence 57899999999888853 235799999996 443211 2356799999999999999
Q ss_pred HHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-eE
Q 026418 77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RY 150 (239)
Q Consensus 77 ~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y 150 (239)
++.+ .|++++++||+.++++...............+..+.+ ...+.+++|+|++++.++.... ..| +|
T Consensus 191 la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~ 264 (302)
T 1w6u_A 191 LAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIP------CGRLGTVEELANLAAFLCSDYASWINGAVI 264 (302)
T ss_dssp HHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCT------TSSCBCHHHHHHHHHHHTSGGGTTCCSCEE
T ss_pred HHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCC------cCCCCCHHHHHHHHHHHcCCcccccCCCEE
Confidence 8877 6899999999999987432111111111123333322 1357899999999999886432 234 77
Q ss_pred EEe-cCCCCHHHHHHHHHHhC
Q 026418 151 LCA-ESVLHRGEVVEILAKFF 170 (239)
Q Consensus 151 ~~~-~~~~s~~el~~~i~~~~ 170 (239)
++. |..+++.++++.+.+..
T Consensus 265 ~v~gg~~~~~~~~~~~~~~~~ 285 (302)
T 1w6u_A 265 KFDGGEEVLISGEFNDLRKVT 285 (302)
T ss_dssp EESTTHHHHHHSTTGGGGGCC
T ss_pred EECCCeeeccCCccccchhhc
Confidence 776 56677777777666553
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=2e-10 Score=88.73 Aligned_cols=129 Identities=17% Similarity=0.123 Sum_probs=91.8
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++. +.+..++|++||. +.+... .+...|+.+|...|.+++.+
T Consensus 115 ~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~-~~~~~~--------------------~~~~~Y~~sK~a~~~~~~~~ 173 (255)
T 1fmc_A 115 YELNVFSFFHLSQLVAPEMEKNGGGVILTITSM-AAENKN--------------------INMTSYASSKAAASHLVRNM 173 (255)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG-GGTCCC--------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcch-hhcCCC--------------------CCCcccHHHHHHHHHHHHHH
Confidence 5789999999999885 4467899999995 554211 23578999999999999988
Q ss_pred HHHc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-eEE
Q 026418 78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL 151 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~ 151 (239)
+.+. ++++.++||+.++++...... .......+..+.+ ...+.+++|+|++++.++.... ..| +|+
T Consensus 174 ~~~~~~~~i~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~~~------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~ 245 (255)
T 1fmc_A 174 AFDLGEKNIRVNGIAPGAILTDALKSVI--TPEIEQKMLQHTP------IRRLGQPQDIANAALFLCSPAASWVSGQILT 245 (255)
T ss_dssp HHHHHTTTEEEEEEEECSBCSHHHHTTC--CHHHHHHHHHTCS------SCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHhhhcCcEEEEEecccCcchhhhhcc--ChHHHHHHHhcCC------cccCCCHHHHHHHHHHHhCCccccCCCcEEE
Confidence 7664 899999999999987432211 1223334444432 2357899999999999986532 234 888
Q ss_pred Ee-cCCCCH
Q 026418 152 CA-ESVLHR 159 (239)
Q Consensus 152 ~~-~~~~s~ 159 (239)
+. |..+|+
T Consensus 246 v~gg~~~s~ 254 (255)
T 1fmc_A 246 VSGGGVQEL 254 (255)
T ss_dssp ESTTSCCCC
T ss_pred ECCceeccC
Confidence 77 555553
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.14 E-value=2.5e-10 Score=89.43 Aligned_cols=140 Identities=16% Similarity=0.146 Sum_probs=86.8
Q ss_pred chhHhHHHHHHHHHHHhc----CCCEEEEccchhhh-ccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----KVRRVVFTSSIGAV-YMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----~v~~~i~~Ss~~~v-y~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++.++++++.+. + .++|++||. +. +... .+...|+.+|...+.+.+.
T Consensus 118 ~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~-~~~~~~~--------------------~~~~~Y~~sK~a~~~~~~~ 175 (278)
T 1spx_A 118 LNLNLRSVIALTKKAVPHLSSTK-GEIVNISSI-ASGLHAT--------------------PDFPYYSIAKAAIDQYTRN 175 (278)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCT-TSSSSCC--------------------TTSHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecc-cccccCC--------------------CCccHHHHHHHHHHHHHHH
Confidence 578999999999988764 5 799999996 43 3211 1246799999999999988
Q ss_pred HHHH---cCccEEEEecCcccCCCCCCCCChhHHH------HHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--
Q 026418 77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIH------ILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS-- 145 (239)
Q Consensus 77 ~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~-- 145 (239)
++.+ .|+++.++||+.+.++............ ...+....+ ...+.+.+|+|+++++++..+.
T Consensus 176 la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p------~~~~~~~~dvA~~v~~l~s~~~~~ 249 (278)
T 1spx_A 176 TAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVP------AGVMGQPQDIAEVIAFLADRKTSS 249 (278)
T ss_dssp HHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCT------TSSCBCHHHHHHHHHHHHCHHHHT
T ss_pred HHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCC------CcCCCCHHHHHHHHHHHcCccccC
Confidence 8765 5899999999999987532110000000 122221111 1348899999999999886432
Q ss_pred -CCc-eEEEe-cCCCCHHHHHHHHHHh
Q 026418 146 -ASG-RYLCA-ESVLHRGEVVEILAKF 169 (239)
Q Consensus 146 -~~~-~y~~~-~~~~s~~el~~~i~~~ 169 (239)
..| ++++. |..+++.++++.+.+.
T Consensus 250 ~~tG~~~~vdgG~~~~~~~~~~~~~~~ 276 (278)
T 1spx_A 250 YIIGHQLVVDGGSSLIMGLHCQDFAKL 276 (278)
T ss_dssp TCCSCEEEESTTGGGC-----------
T ss_pred cccCcEEEECCCcccccCcccccHHHH
Confidence 335 77766 6789999999988875
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.11 E-value=2.1e-10 Score=88.03 Aligned_cols=125 Identities=17% Similarity=0.125 Sum_probs=88.1
Q ss_pred chhHhHHHHHHHHHHHhc----C-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----K-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++.++++++.+. + ..++|++||. ..|... .+...|+.+|...|.+++.
T Consensus 104 ~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~-~~~~~~--------------------~~~~~Y~~sK~a~~~~~~~ 162 (244)
T 1cyd_A 104 FSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSM-VAHVTF--------------------PNLITYSSTKGAMTMLTKA 162 (244)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCG-GGTSCC--------------------TTBHHHHHHHHHHHHHHHH
T ss_pred HhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcch-hhcCCC--------------------CCcchhHHHHHHHHHHHHH
Confidence 578999999999888654 4 5799999995 655321 1256799999999999999
Q ss_pred HHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-eE
Q 026418 77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RY 150 (239)
Q Consensus 77 ~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y 150 (239)
++++ .++++.++||+.++++....... ....+..+.++.+ .+++++++|+|++++.++.... ..| .+
T Consensus 163 ~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~~------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~ 235 (244)
T 1cyd_A 163 MAMELGPHKIRVNSVNPTVVLTDMGKKVSA-DPEFARKLKERHP------LRKFAEVEDVVNSILFLLSDRSASTSGGGI 235 (244)
T ss_dssp HHHHHGGGTEEEEEEEECCBTTHHHHHHTC-CHHHHHHHHHHST------TSSCBCHHHHHHHHHHHHSGGGTTCCSSEE
T ss_pred HHHHhhhcCeEEEEEecCcccCcccccccc-CHHHHHHHHhcCC------ccCCCCHHHHHHHHHHHhCchhhcccCCEE
Confidence 8776 58999999999999874211000 1122233333322 3679999999999999987542 234 66
Q ss_pred EEec
Q 026418 151 LCAE 154 (239)
Q Consensus 151 ~~~~ 154 (239)
++.+
T Consensus 236 ~v~g 239 (244)
T 1cyd_A 236 LVDA 239 (244)
T ss_dssp EEST
T ss_pred EECC
Confidence 6653
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.08 E-value=5.3e-10 Score=85.80 Aligned_cols=125 Identities=14% Similarity=0.142 Sum_probs=85.3
Q ss_pred chhHhHHH----HHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGT----KNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t----~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++ +.++.++++.+..++|++||.++.++. .+...|+.+|...+.+.+.+
T Consensus 108 ~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~l 166 (245)
T 2ph3_A 108 LEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGN---------------------PGQANYVASKAGLIGFTRAV 166 (245)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC---------------------SSBHHHHHHHHHHHHHHHHH
T ss_pred HhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCC---------------------CCCcchHHHHHHHHHHHHHH
Confidence 57899994 445555556677899999996455432 12467999999999999888
Q ss_pred HHHc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-eEE
Q 026418 78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL 151 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~ 151 (239)
+++. |++++++||+.++++..... .......+..+.+ ...+++++|+|++++.++..+. ..| +|+
T Consensus 167 a~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~ 237 (245)
T 2ph3_A 167 AKEYAQRGITVNAVAPGFIETEMTERL---PQEVKEAYLKQIP------AGRFGRPEEVAEAVAFLVSEKAGYITGQTLC 237 (245)
T ss_dssp HHHHGGGTEEEEEEEECSBCCHHHHTS---CHHHHHHHHHTCT------TCSCBCHHHHHHHHHHHTSGGGTTCCSCEEE
T ss_pred HHHHHHcCeEEEEEEEEeecCcchhhc---CHHHHHHHHhcCC------CCCCcCHHHHHHHHHHHhCcccccccCCEEE
Confidence 7664 89999999999988643211 1122222332221 2458899999999999986532 234 777
Q ss_pred EecCC
Q 026418 152 CAESV 156 (239)
Q Consensus 152 ~~~~~ 156 (239)
+.|..
T Consensus 238 v~gg~ 242 (245)
T 2ph3_A 238 VDGGL 242 (245)
T ss_dssp ESTTC
T ss_pred ECCCC
Confidence 77543
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.07 E-value=1.3e-09 Score=84.38 Aligned_cols=128 Identities=14% Similarity=0.081 Sum_probs=88.9
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++.+ .+..++|++||. +.+.... ..+...|+.+|...|.+++.+
T Consensus 119 ~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~-~~~~~~~------------------~~~~~~Y~~sK~a~~~~~~~l 179 (260)
T 3awd_A 119 VDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSM-SGLIVNR------------------PQQQAAYNASKAGVHQYIRSL 179 (260)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG-GGTSCCS------------------SSCCHHHHHHHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHHHHHhhcCCCEEEEEecc-hhcccCC------------------CCCccccHHHHHHHHHHHHHH
Confidence 57899999999998864 356899999996 4332110 123478999999999999998
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eEE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYL 151 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y~ 151 (239)
+.+ .|++++++||+.++++...... ........+..+.+ ...+++.+|+|++++.++... ...| +|+
T Consensus 180 ~~e~~~~gi~v~~v~pg~v~t~~~~~~~-~~~~~~~~~~~~~~------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~ 252 (260)
T 3awd_A 180 AAEWAPHGIRANAVAPTYIETTLTRFGM-EKPELYDAWIAGTP------MGRVGQPDEVASVVQFLASDAASLMTGAIVN 252 (260)
T ss_dssp HHHHGGGTEEEEEEEECCBCCTTTHHHH-TCHHHHHHHHHTCT------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHhhhcCeEEEEEEeeeeccchhhccc-CChHHHHHHHhcCC------cCCCCCHHHHHHHHHHHhCchhccCCCcEEE
Confidence 876 6899999999999998532100 01122333333322 235889999999999988643 2234 777
Q ss_pred EecC
Q 026418 152 CAES 155 (239)
Q Consensus 152 ~~~~ 155 (239)
+.|.
T Consensus 253 v~gg 256 (260)
T 3awd_A 253 VDAG 256 (260)
T ss_dssp ESTT
T ss_pred ECCc
Confidence 7754
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.07 E-value=8.1e-10 Score=85.78 Aligned_cols=129 Identities=19% Similarity=0.081 Sum_probs=84.6
Q ss_pred chhHhHHHHHHHHHHHhc----C-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----K-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++.++++++.+. + ..++|++||.++.++. .+...|+.+|...+.+++.
T Consensus 120 ~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~ 178 (264)
T 2pd6_A 120 IAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGN---------------------VGQTNYAASKAGVIGLTQT 178 (264)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCC---------------------TTBHHHHHHHHHHHHHHHH
T ss_pred HhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCC---------------------CCChhhHHHHHHHHHHHHH
Confidence 578999999999998764 3 4689999996444421 1356799999999999998
Q ss_pred HHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eE
Q 026418 77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RY 150 (239)
Q Consensus 77 ~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y 150 (239)
++.+ .|++++++||+.++++..... .......+..+. ....+.+++|+|++++.++... ...| .+
T Consensus 179 la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~------~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~ 249 (264)
T 2pd6_A 179 AARELGRHGIRCNSVLPGFIATPMTQKV---PQKVVDKITEMI------PMGHLGDPEDVADVVAFLASEDSGYITGTSV 249 (264)
T ss_dssp HHHHHGGGTEEEEEEEECSBCSCC-------------CTGGGC------TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred HHHHhhhcCeEEEEEeeecccccchhhc---CHHHHHHHHHhC------CCCCCCCHHHHHHHHHHHcCCcccCCCCCEE
Confidence 8776 689999999999999853211 011111111111 1235789999999999988643 2334 66
Q ss_pred EEe-cCCCCHH
Q 026418 151 LCA-ESVLHRG 160 (239)
Q Consensus 151 ~~~-~~~~s~~ 160 (239)
++. |..++..
T Consensus 250 ~v~gg~~~~~~ 260 (264)
T 2pd6_A 250 EVTGGLFMAEN 260 (264)
T ss_dssp EESTTC-----
T ss_pred EECCCceeccc
Confidence 666 4444443
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.04 E-value=9.2e-10 Score=85.61 Aligned_cols=124 Identities=14% Similarity=0.154 Sum_probs=74.8
Q ss_pred chhHhHHHHHHHHHH----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++ ++.+..++|++||. +.+... .+...|+.+|...+.+++.+
T Consensus 120 ~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~-~~~~~~--------------------~~~~~Y~~sK~a~~~~~~~l 178 (266)
T 1xq1_A 120 ISTNLESAYHLSQLAHPLLKASGCGNIIFMSSI-AGVVSA--------------------SVGSIYSATKGALNQLARNL 178 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-------------------------------CCHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccc-hhccCC--------------------CCCchHHHHHHHHHHHHHHH
Confidence 578999999999998 45567899999996 444211 13567999999999999988
Q ss_pred HHHc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eEE
Q 026418 78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYL 151 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y~ 151 (239)
+.+. |++++++||+.++++...... .......+....+ ...+++.+|+|++++.++... ...| +++
T Consensus 179 a~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~~~------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~ 250 (266)
T 1xq1_A 179 ACEWASDGIRANAVAPAVIATPLAEAVY--DDEFKKVVISRKP------LGRFGEPEEVSSLVAFLCMPAASYITGQTIC 250 (266)
T ss_dssp HHHHGGGTCEEEEEECCSCC---------------------------------CCGGGGHHHHHHHTSGGGTTCCSCEEE
T ss_pred HHHHhHhCcEEEEEeeCCCccchhhhhc--CHHHHHHHHhcCC------CCCCcCHHHHHHHHHHHcCccccCccCcEEE
Confidence 7764 899999999999998533211 0011111111111 134789999999999988643 2234 666
Q ss_pred Eec
Q 026418 152 CAE 154 (239)
Q Consensus 152 ~~~ 154 (239)
+.|
T Consensus 251 v~g 253 (266)
T 1xq1_A 251 VDG 253 (266)
T ss_dssp CCC
T ss_pred EcC
Confidence 664
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.03 E-value=5.1e-10 Score=83.42 Aligned_cols=111 Identities=14% Similarity=0.048 Sum_probs=82.8
Q ss_pred chhHhHHHHHHHHHHHhc---CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA---KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA 78 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~---~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~ 78 (239)
+++|+.++.++++++.+. + .++|++||. ..+... .+...|+.+|...|.+++.++
T Consensus 86 ~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~-~~~~~~--------------------~~~~~Y~~sK~~~~~~~~~~~ 143 (202)
T 3d7l_A 86 ISSKLGGQINLVLLGIDSLNDK-GSFTLTTGI-MMEDPI--------------------VQGASAAMANGAVTAFAKSAA 143 (202)
T ss_dssp HHTTTHHHHHHHHTTGGGEEEE-EEEEEECCG-GGTSCC--------------------TTCHHHHHHHHHHHHHHHHHT
T ss_pred HhhccHHHHHHHHHHHHHhccC-CEEEEEcch-hhcCCC--------------------CccHHHHHHHHHHHHHHHHHH
Confidence 468999999999999886 4 689999995 443211 235679999999999999987
Q ss_pred HHc--CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCceEEE
Q 026418 79 VAR--GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLC 152 (239)
Q Consensus 79 ~~~--~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~ 152 (239)
.+. |++++++||+.++++.. ....+ ...+++++++|+|++++.++.....+.+|++
T Consensus 144 ~e~~~gi~v~~v~pg~v~~~~~------------~~~~~------~~~~~~~~~~dva~~~~~~~~~~~~G~~~~v 201 (202)
T 3d7l_A 144 IEMPRGIRINTVSPNVLEESWD------------KLEPF------FEGFLPVPAAKVARAFEKSVFGAQTGESYQV 201 (202)
T ss_dssp TSCSTTCEEEEEEECCBGGGHH------------HHGGG------STTCCCBCHHHHHHHHHHHHHSCCCSCEEEE
T ss_pred HHccCCeEEEEEecCccCCchh------------hhhhh------ccccCCCCHHHHHHHHHHhhhccccCceEec
Confidence 653 89999999999998731 11111 1236789999999999988854433337764
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.02 E-value=5.4e-09 Score=81.06 Aligned_cols=122 Identities=15% Similarity=0.062 Sum_probs=88.5
Q ss_pred chhHhHHHHHHHHHH----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.|+.++++++ ++.+..++|++||. ..+.... ..+...|+.+|...+.+.+.+
T Consensus 124 ~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~-~~~~~~~------------------~~~~~~Y~~sKaa~~~l~~~l 184 (260)
T 3un1_A 124 LGVNVAGFFHITQRAAAEMLKQGSGHIVSITTS-LVDQPMV------------------GMPSALASLTKGGLNAVTRSL 184 (260)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCT-TTTSCBT------------------TCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHHcCCcEEEEEech-hhccCCC------------------CCccHHHHHHHHHHHHHHHHH
Confidence 579999999999988 45667899999995 5442211 124578999999999999999
Q ss_pred HHHc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCc-eEEEe
Q 026418 78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASG-RYLCA 153 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~y~~~ 153 (239)
+.+. |+++.+++|+.+.++..... ....+....+ ...+.+++|+|++++++.......| ++++.
T Consensus 185 a~e~~~~gI~vn~v~PG~v~t~~~~~~------~~~~~~~~~p------~~r~~~~~dva~av~~L~~~~~itG~~i~vd 252 (260)
T 3un1_A 185 AMEFSRSGVRVNAVSPGVIKTPMHPAE------THSTLAGLHP------VGRMGEIRDVVDAVLYLEHAGFITGEILHVD 252 (260)
T ss_dssp HHHTTTTTEEEEEEEECCBCCTTSCGG------GHHHHHTTST------TSSCBCHHHHHHHHHHHHHCTTCCSCEEEES
T ss_pred HHHhCcCCeEEEEEeecCCCCCCCCHH------HHHHHhccCC------CCCCcCHHHHHHHHHHhcccCCCCCcEEEEC
Confidence 8876 89999999999998854321 1122222221 2457789999999999865554445 77776
Q ss_pred c
Q 026418 154 E 154 (239)
Q Consensus 154 ~ 154 (239)
|
T Consensus 253 G 253 (260)
T 3un1_A 253 G 253 (260)
T ss_dssp T
T ss_pred C
Confidence 3
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=4.2e-09 Score=80.97 Aligned_cols=123 Identities=15% Similarity=0.139 Sum_probs=89.4
Q ss_pred chhHhHHHHHHHHHH----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++ ++.+..++|++||.++.++. .+...|+.+|...+.+.+.+
T Consensus 110 ~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~l 168 (246)
T 3osu_A 110 IDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGN---------------------PGQANYVATKAGVIGLTKSA 168 (246)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCC---------------------CCChHHHHHHHHHHHHHHHH
Confidence 678999999999998 55566799999997454432 13567999999999999888
Q ss_pred HH---HcCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-eEE
Q 026418 78 AV---ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL 151 (239)
Q Consensus 78 ~~---~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~ 151 (239)
+. ..|+++..++|+.+.++..... .......+..+.+ ...+.+.+|+|+++++++.... ..| +++
T Consensus 169 a~e~~~~gi~vn~v~PG~v~t~~~~~~---~~~~~~~~~~~~p------~~r~~~~~dva~~v~~l~s~~~~~itG~~i~ 239 (246)
T 3osu_A 169 ARELASRGITVNAVAPGFIVSDMTDAL---SDELKEQMLTQIP------LARFGQDTDIANTVAFLASDKAKYITGQTIH 239 (246)
T ss_dssp HHHHGGGTEEEEEEEECSBGGGCCSCS---CHHHHHHHHTTCT------TCSCBCHHHHHHHHHHHTSGGGTTCCSCEEE
T ss_pred HHHhcccCeEEEEEEECCCcCCccccc---CHHHHHHHHhcCC------CCCCcCHHHHHHHHHHHhCccccCCCCCEEE
Confidence 77 3589999999999998764321 1233344444433 2457789999999999886442 224 777
Q ss_pred Eec
Q 026418 152 CAE 154 (239)
Q Consensus 152 ~~~ 154 (239)
+.|
T Consensus 240 vdg 242 (246)
T 3osu_A 240 VNG 242 (246)
T ss_dssp EST
T ss_pred eCC
Confidence 764
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.99 E-value=2.7e-09 Score=81.59 Aligned_cols=124 Identities=23% Similarity=0.160 Sum_probs=87.1
Q ss_pred chhHhHHHHHHHHHHHhcC----------CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK----------VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAE 71 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~----------v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E 71 (239)
+++|+.++.++++++.+.- ..++|++||. ..+... .+...|+.+|...+
T Consensus 98 ~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~-~~~~~~--------------------~~~~~Y~~sK~a~~ 156 (242)
T 1uay_A 98 LEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASV-AAFEGQ--------------------IGQAAYAASKGGVV 156 (242)
T ss_dssp HHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCT-HHHHCC--------------------TTCHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCCh-hhccCC--------------------CCCchhhHHHHHHH
Confidence 5789999999999997642 1289999996 555321 13578999999999
Q ss_pred HHHHHHHHHc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCc
Q 026418 72 KAAWEEAVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASG 148 (239)
Q Consensus 72 ~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~ 148 (239)
.+.+.++.+. |++++++||+.++++..... .......+..+.+. ...+++++|+|++++.++......|
T Consensus 157 ~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~~-----~~~~~~~~dva~~~~~l~~~~~~~G 228 (242)
T 1uay_A 157 ALTLPAARELAGWGIRVVTVAPGLFDTPLLQGL---PEKAKASLAAQVPF-----PPRLGRPEEYAALVLHILENPMLNG 228 (242)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTS---CHHHHHHHHTTCCS-----SCSCCCHHHHHHHHHHHHHCTTCCS
T ss_pred HHHHHHHHHHhhcCcEEEEEEeccCcchhhhcc---chhHHHHHHhhCCC-----cccCCCHHHHHHHHHHHhcCCCCCC
Confidence 9998887653 89999999999998753221 11222333333221 1347899999999999998644445
Q ss_pred -eEEEec
Q 026418 149 -RYLCAE 154 (239)
Q Consensus 149 -~y~~~~ 154 (239)
+|++.|
T Consensus 229 ~~~~v~g 235 (242)
T 1uay_A 229 EVVRLDG 235 (242)
T ss_dssp CEEEEST
T ss_pred cEEEEcC
Confidence 777763
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=3.6e-09 Score=81.28 Aligned_cols=123 Identities=17% Similarity=0.057 Sum_probs=84.6
Q ss_pred chhHhHHHHHHHHHH----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++ ++.+..++|++||.++.++.+ +...|+.+|...+.+.+.+
T Consensus 113 ~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---------------------~~~~Y~~sK~a~~~~~~~l 171 (248)
T 2pnf_A 113 LKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNV---------------------GQVNYSTTKAGLIGFTKSL 171 (248)
T ss_dssp HHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCT---------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCC---------------------CCchHHHHHHHHHHHHHHH
Confidence 578999996666654 455678999999964555321 2467999999999999888
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eEE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYL 151 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y~ 151 (239)
+++ .+++++++||+.++++..... .......+....+ ...+++++|+|++++.++... ...| +|+
T Consensus 172 a~e~~~~~i~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~ 242 (248)
T 2pnf_A 172 AKELAPRNVLVNAVAPGFIETDMTAVL---SEEIKQKYKEQIP------LGRFGSPEEVANVVLFLCSELASYITGEVIH 242 (248)
T ss_dssp HHHHGGGTEEEEEEEECSBCCGGGGGS---CHHHHHHHHHTCT------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHhcccCeEEEEEEeceecCchhhhc---cHHHHHHHHhcCC------CCCccCHHHHHHHHHHHhCchhhcCCCcEEE
Confidence 765 379999999999998753211 1112222222221 245889999999999988643 2234 777
Q ss_pred Eec
Q 026418 152 CAE 154 (239)
Q Consensus 152 ~~~ 154 (239)
+.|
T Consensus 243 v~g 245 (248)
T 2pnf_A 243 VNG 245 (248)
T ss_dssp EST
T ss_pred eCC
Confidence 764
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=98.99 E-value=5.2e-09 Score=80.52 Aligned_cols=125 Identities=16% Similarity=0.065 Sum_probs=85.4
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++. +.+..++|++||. +.+... .+...|+.+|...+.+++.+
T Consensus 111 ~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~-~~~~~~--------------------~~~~~Y~~sK~a~~~~~~~l 169 (250)
T 2cfc_A 111 MAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASV-ASLVAF--------------------PGRSAYTTSKGAVLQLTKSV 169 (250)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG-GGTSCC--------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCh-hhccCC--------------------CCchhHHHHHHHHHHHHHHH
Confidence 5789999977766654 4467899999996 443211 13567999999999999988
Q ss_pred HHHc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-eEE
Q 026418 78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL 151 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~ 151 (239)
+.+. |++++++||+.++++....... .......+..+.+ ...+.+.+|+|++++.++..+. ..| +++
T Consensus 170 ~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~ 242 (250)
T 2cfc_A 170 AVDYAGSGIRCNAVCPGMIETPMTQWRLD-QPELRDQVLARIP------QKEIGTAAQVADAVMFLAGEDATYVNGAALV 242 (250)
T ss_dssp HHHHGGGTEEEEEEEECSBCSTTTHHHHT-SHHHHHHHHTTCT------TCSCBCHHHHHHHHHHHHSTTCTTCCSCEEE
T ss_pred HHHhcccCeEEEEEEeCcCccCccccccC-CHHHHHHHHhcCC------CCCCcCHHHHHHHHHHHcCchhhcccCCEEE
Confidence 7664 8999999999999985321000 0112233333222 2357899999999999987543 235 666
Q ss_pred Eec
Q 026418 152 CAE 154 (239)
Q Consensus 152 ~~~ 154 (239)
+.|
T Consensus 243 v~g 245 (250)
T 2cfc_A 243 MDG 245 (250)
T ss_dssp EST
T ss_pred ECC
Confidence 664
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=98.98 E-value=3.4e-09 Score=81.27 Aligned_cols=125 Identities=18% Similarity=0.163 Sum_probs=86.9
Q ss_pred chhHhHHHHHHHHHHHhc----C-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----K-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++.++++++.+. + ..++|++||. ..+... .+...|+.+|...|.+++.
T Consensus 104 ~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~-~~~~~~--------------------~~~~~Y~~sK~a~~~~~~~ 162 (244)
T 3d3w_A 104 FEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQ-CSQRAV--------------------TNHSVYCSTKGALDMLTKV 162 (244)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCG-GGTSCC--------------------TTBHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCch-hhccCC--------------------CCCchHHHHHHHHHHHHHH
Confidence 578999999999888653 4 5799999995 544211 2357899999999999999
Q ss_pred HHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eE
Q 026418 77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RY 150 (239)
Q Consensus 77 ~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y 150 (239)
++.+ .++++.++||+.++++........ ...+..+..+.+ ...+++++|+|++++.++... ...| +|
T Consensus 163 la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~ 235 (244)
T 3d3w_A 163 MALELGPHKIRVNAVNPTVVMTSMGQATWSD-PHKAKTMLNRIP------LGKFAEVEHVVNAILFLLSDRSGMTTGSTL 235 (244)
T ss_dssp HHHHHGGGTEEEEEEEECCBTTTTHHHHSCS-TTHHHHHHHTCT------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred HHHHhcccCeEEEEEEeccccccchhhhccC-hHHHHHHHhhCC------CCCCcCHHHHHHHHHHHcCccccCCCCCEE
Confidence 8766 489999999999998742210000 011122222221 246899999999999998643 2234 77
Q ss_pred EEec
Q 026418 151 LCAE 154 (239)
Q Consensus 151 ~~~~ 154 (239)
++.+
T Consensus 236 ~v~g 239 (244)
T 3d3w_A 236 PVEG 239 (244)
T ss_dssp EEST
T ss_pred EECC
Confidence 7764
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.97 E-value=3.2e-09 Score=82.81 Aligned_cols=126 Identities=18% Similarity=0.084 Sum_probs=86.7
Q ss_pred chhHhHHHHHHHHHHHhc---CCCEEEEccchhhhc-cCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA---KVRRVVFTSSIGAVY-MDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~---~v~~~i~~Ss~~~vy-~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++.+. + .++|++||. +.+ ... .+...|+.+|...|.+++.+
T Consensus 127 ~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~-~~~~~~~--------------------~~~~~Y~~sK~a~~~~~~~~ 184 (274)
T 1ja9_A 127 FNLNTRGQFFVAQQGLKHCRRG-GRIILTSSI-AAVMTGI--------------------PNHALYAGSKAAVEGFCRAF 184 (274)
T ss_dssp HHHHTHHHHHHHHHHHHHEEEE-EEEEEECCG-GGTCCSC--------------------CSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhC-CEEEEEcCh-HhccCCC--------------------CCCchHHHHHHHHHHHHHHH
Confidence 578999999999999875 4 699999996 544 211 12467999999999999988
Q ss_pred HHHc---CccEEEEecCcccCCCCCCCC---------Chh-HHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 78 AVAR---GVDLVVVNPVLVLGPLLQSTV---------NAS-IIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~~~~~~---------~~~-~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
+.+. ++++.++||+.++++...... ... ......+..+. ....+++++|+|++++.++...
T Consensus 185 ~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~dva~~i~~l~~~~ 258 (274)
T 1ja9_A 185 AVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMN------PLKRIGYPADIGRAVSALCQEE 258 (274)
T ss_dssp HHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTS------TTSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcC------CCCCccCHHHHHHHHHHHhCcc
Confidence 7764 899999999999875321000 000 11112222222 2356899999999999998753
Q ss_pred C--CCc-eEEEecC
Q 026418 145 S--ASG-RYLCAES 155 (239)
Q Consensus 145 ~--~~~-~y~~~~~ 155 (239)
. ..| +|++.|.
T Consensus 259 ~~~~~G~~~~v~gG 272 (274)
T 1ja9_A 259 SEWINGQVIKLTGG 272 (274)
T ss_dssp GTTCCSCEEEESTT
T ss_pred cccccCcEEEecCC
Confidence 2 234 7777653
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=98.96 E-value=3.4e-09 Score=81.84 Aligned_cols=126 Identities=15% Similarity=0.046 Sum_probs=88.1
Q ss_pred chhHhHHHHHHHHHHHhc----C--C---CEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----K--V---RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEK 72 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----~--v---~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~ 72 (239)
+++|+.++.++++++.+. + . .++|++||. ..+... ..+...|+.+|...|.
T Consensus 114 ~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~-~~~~~~-------------------~~~~~~Y~~sK~a~~~ 173 (258)
T 3afn_B 114 MDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSI-AGHTGG-------------------GPGAGLYGAAKAFLHN 173 (258)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCT-HHHHCC-------------------CTTCHHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecch-hhccCC-------------------CCCchHHHHHHHHHHH
Confidence 578999999999877432 2 2 689999995 444210 0235789999999999
Q ss_pred HHHHHHHHc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC---CC
Q 026418 73 AAWEEAVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP---SA 146 (239)
Q Consensus 73 ~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~---~~ 146 (239)
+++.++.+. |+++.++||+.++++..... .......+..+.+ ...+++++|+|++++.++... ..
T Consensus 174 ~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~------~~~~~~~~dva~~~~~l~~~~~~~~~ 244 (258)
T 3afn_B 174 VHKNWVDFHTKDGVRFNIVSPGTVDTAFHADK---TQDVRDRISNGIP------MGRFGTAEEMAPAFLFFASHLASGYI 244 (258)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECSBSSGGGTTC---CHHHHHHHHTTCT------TCSCBCGGGTHHHHHHHHCHHHHTTC
T ss_pred HHHHHHHhhcccCeEEEEEeCCCccccccccc---CHHHHHHHhccCC------CCcCCCHHHHHHHHHHHhCcchhccc
Confidence 999887654 89999999999999864321 1223334443332 246899999999999988643 22
Q ss_pred Cc-eEEEecCC
Q 026418 147 SG-RYLCAESV 156 (239)
Q Consensus 147 ~~-~y~~~~~~ 156 (239)
.| +|++.|..
T Consensus 245 ~G~~~~v~gg~ 255 (258)
T 3afn_B 245 TGQVLDINGGQ 255 (258)
T ss_dssp CSEEEEESTTS
T ss_pred cCCEEeECCCc
Confidence 35 77877543
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=98.94 E-value=6.2e-09 Score=80.26 Aligned_cols=128 Identities=13% Similarity=0.056 Sum_probs=85.4
Q ss_pred chhHhHHHHHHHHHH----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++ ++.+..++|++||. +.+...+ ..+...|+.+|...|.+++.+
T Consensus 113 ~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~-~~~~~~~------------------~~~~~~Y~~sK~a~~~~~~~~ 173 (254)
T 2wsb_A 113 MAVNVDGMFWASRAFGRAMVARGAGAIVNLGSM-SGTIVNR------------------PQFASSYMASKGAVHQLTRAL 173 (254)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG-GGTSCCS------------------SSCBHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecc-hhccCCC------------------CCcchHHHHHHHHHHHHHHHH
Confidence 568999977777665 44567899999996 5442111 123478999999999999988
Q ss_pred HHHc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eEE
Q 026418 78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYL 151 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y~ 151 (239)
+.+. |++++++||+.++++..... .........+....+ ...+++++|+|++++.++... ...| +++
T Consensus 174 ~~~~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~~------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~ 246 (254)
T 2wsb_A 174 AAEWAGRGVRVNALAPGYVATEMTLKM-RERPELFETWLDMTP------MGRCGEPSEIAAAALFLASPAASYVTGAILA 246 (254)
T ss_dssp HHHHGGGTEEEEEEEECCBCSHHHHHH-HTCHHHHHHHHHTST------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHHhhcCeEEEEEEecccCchhhhcc-ccChHHHHHHHhcCC------CCCCCCHHHHHHHHHHHhCcccccccCCEEE
Confidence 7764 89999999999998742100 000112223333222 245889999999999988643 2234 667
Q ss_pred EecC
Q 026418 152 CAES 155 (239)
Q Consensus 152 ~~~~ 155 (239)
+.|.
T Consensus 247 v~gG 250 (254)
T 2wsb_A 247 VDGG 250 (254)
T ss_dssp ESTT
T ss_pred ECCC
Confidence 6644
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=98.94 E-value=3.7e-09 Score=81.17 Aligned_cols=124 Identities=14% Similarity=0.068 Sum_probs=82.0
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++.+ .+..++|++||.++.|+.+ +...|+.+|...|.+++.+
T Consensus 111 ~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---------------------~~~~Y~~sK~a~~~~~~~l 169 (247)
T 2hq1_A 111 LNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNA---------------------GQANYAASKAGLIGFTKSI 169 (247)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC------------------------------CHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCC---------------------CCcHhHHHHHHHHHHHHHH
Confidence 57899998888887754 4678999999964555321 2467999999999999988
Q ss_pred HHHc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eEE
Q 026418 78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYL 151 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y~ 151 (239)
+++. ++++.+++|+.+.++.... . .......+..+.+ ...+++++|+|+++..++... ...| +|+
T Consensus 170 a~e~~~~gi~v~~v~Pg~v~t~~~~~-~--~~~~~~~~~~~~~------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~ 240 (247)
T 2hq1_A 170 AKEFAAKGIYCNAVAPGIIKTDMTDV-L--PDKVKEMYLNNIP------LKRFGTPEEVANVVGFLASDDSNYITGQVIN 240 (247)
T ss_dssp HHHHGGGTEEEEEEEECSBCCHHHHT-S--CHHHHHHHHTTST------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHHHHcCcEEEEEEEEEEeccchhh-c--chHHHHHHHhhCC------CCCCCCHHHHHHHHHHHcCcccccccCcEEE
Confidence 7654 8999999999997653211 1 1112222332221 245889999999999888643 2234 787
Q ss_pred EecC
Q 026418 152 CAES 155 (239)
Q Consensus 152 ~~~~ 155 (239)
+.|.
T Consensus 241 v~gG 244 (247)
T 2hq1_A 241 IDGG 244 (247)
T ss_dssp ESTT
T ss_pred eCCC
Confidence 7643
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=98.93 E-value=6.3e-09 Score=79.72 Aligned_cols=123 Identities=15% Similarity=0.107 Sum_probs=85.4
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++.+ .+..++|++||.++.++. .+...|+.+|...+.+.+.+
T Consensus 107 ~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~l 165 (244)
T 1edo_A 107 IDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGN---------------------IGQANYAAAKAGVIGFSKTA 165 (244)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred HHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCC---------------------CCCccchhhHHHHHHHHHHH
Confidence 57899999999998865 357899999996454432 12467999999999998888
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC---CCc-eE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS---ASG-RY 150 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~-~y 150 (239)
+.+ .|+++.++||+.++++..... ............+ ...+++.+|+|+++++++..+. ..| +|
T Consensus 166 a~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~------~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~ 236 (244)
T 1edo_A 166 AREGASRNINVNVVCPGFIASDMTAKL---GEDMEKKILGTIP------LGRTGQPENVAGLVEFLALSPAASYITGQAF 236 (244)
T ss_dssp HHHHHTTTEEEEEEEECSBCSHHHHTT---CHHHHHHHHTSCT------TCSCBCHHHHHHHHHHHHHCSGGGGCCSCEE
T ss_pred HHHhhhcCCEEEEEeeCccccchhhhc---ChHHHHHHhhcCC------CCCCCCHHHHHHHHHHHhCCCccCCcCCCEE
Confidence 765 489999999999988642211 1112222222221 2358899999999999884332 234 67
Q ss_pred EEec
Q 026418 151 LCAE 154 (239)
Q Consensus 151 ~~~~ 154 (239)
++.|
T Consensus 237 ~v~g 240 (244)
T 1edo_A 237 TIDG 240 (244)
T ss_dssp EEST
T ss_pred EeCC
Confidence 6664
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=98.92 E-value=7.7e-09 Score=80.11 Aligned_cols=131 Identities=16% Similarity=0.120 Sum_probs=87.3
Q ss_pred chhHhHHHHHHHHHHHhc----C-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----K-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++.++++++.+. + -.++|++||.++.++. .+...|+.+|...+.+.+.
T Consensus 110 ~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asK~a~~~~~~~ 168 (259)
T 4e6p_A 110 FAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGE---------------------ALVAIYCATKAAVISLTQS 168 (259)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC---------------------TTBHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCC---------------------CCChHHHHHHHHHHHHHHH
Confidence 579999999999988653 2 3589999996333321 1256799999999999999
Q ss_pred HHHHc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCc----c--CCCCCCceehHHHHHHHHHhhcCCC--
Q 026418 77 EAVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKT----Y--ANSVQAYVHVRDVALAHILVYETPS-- 145 (239)
Q Consensus 77 ~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~~~i~v~D~a~~~~~~~~~~~-- 145 (239)
++.+. |+++..++|+.++++.... ....+.......... + ......+.+++|+|+++++++....
T Consensus 169 la~e~~~~gi~vn~v~PG~v~t~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~~~~ 244 (259)
T 4e6p_A 169 AGLDLIKHRINVNAIAPGVVDGEHWDG----VDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIFLASAESDY 244 (259)
T ss_dssp HHHHHGGGTEEEEEEEECCBCSTTHHH----HHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHHHHHTTSGGGTT
T ss_pred HHHHhhhcCCEEEEEEECCCccchhhh----hhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCCccCC
Confidence 88764 8999999999999874211 111111111111100 1 1234668999999999999886432
Q ss_pred CCc-eEEEe-cCCC
Q 026418 146 ASG-RYLCA-ESVL 157 (239)
Q Consensus 146 ~~~-~y~~~-~~~~ 157 (239)
..| +|++. |..+
T Consensus 245 itG~~i~vdgG~~~ 258 (259)
T 4e6p_A 245 IVSQTYNVDGGNWM 258 (259)
T ss_dssp CCSCEEEESTTSSC
T ss_pred CCCCEEEECcChhc
Confidence 234 77776 4443
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.90 E-value=1.5e-08 Score=81.06 Aligned_cols=140 Identities=20% Similarity=0.092 Sum_probs=85.7
Q ss_pred chhHhHHHHHHHHHH----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.|+.++++++ ++.+..++|++||.++.++.. .....|+.||...|.+.+.+
T Consensus 115 ~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~--------------------~~~~~Y~asKaa~~~~~~~l 174 (324)
T 3u9l_A 115 YDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTP--------------------PYLAPYFAAKAAMDAIAVQY 174 (324)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCC--------------------SSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCC--------------------CcchhHHHHHHHHHHHHHHH
Confidence 689999999999998 666678999999963332211 12467999999999999988
Q ss_pred HHH---cCccEEEEecCcccCCCCCC---CCChhHHHHHHHHcCCCCccC--------CCCCCceehHHHHHHHHHhhcC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQS---TVNASIIHILKYLNGSAKTYA--------NSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~--------~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
+.+ .|+++++++||.+.++.... ....................+ ....+..+.+|+|++++.++..
T Consensus 175 a~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~p~~vA~aiv~~~~~ 254 (324)
T 3u9l_A 175 ARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLGEEIKKAFAAIVPPDADVSLVADAIVRVVGT 254 (324)
T ss_dssp HHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTTTHHHHHHHHHHHTSCTTCCTHHHHHHHHHHHTS
T ss_pred HHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHhcC
Confidence 776 58999999999997653211 001111111111111111100 0012236889999999999987
Q ss_pred CCCC-c-eEEEecCCCCHHH
Q 026418 144 PSAS-G-RYLCAESVLHRGE 161 (239)
Q Consensus 144 ~~~~-~-~y~~~~~~~s~~e 161 (239)
+... . .+.+++.......
T Consensus 255 ~~~~~~~~~~~gp~~~~~~~ 274 (324)
T 3u9l_A 255 ASGKRPFRVHVDPAEDGADV 274 (324)
T ss_dssp CTTCCCSEEEECTTCCSHHH
T ss_pred CCCCCCeEEEeCCcchHHHH
Confidence 6422 2 5566654445333
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=98.89 E-value=5.9e-09 Score=80.94 Aligned_cols=131 Identities=13% Similarity=0.108 Sum_probs=87.1
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++. +.+..++|++||. +.+... .+...|+.+|...+.+.+.+
T Consensus 113 ~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~~sK~a~~~~~~~l 171 (263)
T 3ai3_A 113 WELLVMAAVRLARGLVPGMRARGGGAIIHNASI-CAVQPL--------------------WYEPIYNVTKAALMMFSKTL 171 (263)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG-GGTSCC--------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHHcCCcEEEEECch-hhcCCC--------------------CCcchHHHHHHHHHHHHHHH
Confidence 5789999999988875 3457899999996 554321 12467999999999999988
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCC--------hhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC-
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVN--------ASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS- 145 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~- 145 (239)
+.+ .|+++.++||+.++++....... ........+.... .....+.+++|+|+++++++....
T Consensus 172 a~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~p~~~~~~~~dvA~~~~~l~s~~~~ 246 (263)
T 3ai3_A 172 ATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEH-----APIKRFASPEELANFFVFLCSERAT 246 (263)
T ss_dssp HHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHH-----CTTCSCBCHHHHHHHHHHHTSTTCT
T ss_pred HHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcC-----CCCCCCcCHHHHHHHHHHHcCcccc
Confidence 776 58999999999999874210000 0001111121110 112458899999999999987542
Q ss_pred -CCc-eEEEe-cCCCC
Q 026418 146 -ASG-RYLCA-ESVLH 158 (239)
Q Consensus 146 -~~~-~y~~~-~~~~s 158 (239)
..| +|++. |..+|
T Consensus 247 ~~~G~~~~vdgG~~~s 262 (263)
T 3ai3_A 247 YSVGSAYFVDGGMLKT 262 (263)
T ss_dssp TCCSCEEEESTTCCCC
T ss_pred CCCCcEEEECCCcccc
Confidence 234 77776 44443
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.88 E-value=1.9e-08 Score=79.08 Aligned_cols=123 Identities=11% Similarity=0.049 Sum_probs=83.0
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++. +.+..++|++||.++.++. .+...|+.+|...+.+++.+
T Consensus 149 ~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------------------~~~~~Y~asK~a~~~~~~~l 207 (285)
T 2c07_A 149 LRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGN---------------------VGQANYSSSKAGVIGFTKSL 207 (285)
T ss_dssp HHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCC---------------------CCCchHHHHHHHHHHHHHHH
Confidence 5789999888877775 4567899999996444421 12467999999999999888
Q ss_pred HHHc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-eEE
Q 026418 78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL 151 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~ 151 (239)
+.+. |+++.++||+.+.++..... ............+ ...+++++|+|++++.++.... ..| +++
T Consensus 208 a~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~------~~~~~~~~dvA~~~~~l~~~~~~~~~G~~i~ 278 (285)
T 2c07_A 208 AKELASRNITVNAIAPGFISSDMTDKI---SEQIKKNIISNIP------AGRMGTPEEVANLACFLSSDKSGYINGRVFV 278 (285)
T ss_dssp HHHHGGGTEEEEEEEECSBCC-----C---CHHHHHHHHTTCT------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHHHHhCcEEEEEEeCcEecCchhhc---CHHHHHHHHhhCC------CCCCCCHHHHHHHHHHHhCCCcCCCCCCEEE
Confidence 7653 89999999999988753221 1122222322221 1348899999999999886532 234 666
Q ss_pred Eec
Q 026418 152 CAE 154 (239)
Q Consensus 152 ~~~ 154 (239)
+.|
T Consensus 279 v~g 281 (285)
T 2c07_A 279 IDG 281 (285)
T ss_dssp EST
T ss_pred eCC
Confidence 664
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=98.88 E-value=2.3e-08 Score=76.28 Aligned_cols=119 Identities=16% Similarity=0.134 Sum_probs=71.1
Q ss_pred HHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHcCccEE
Q 026418 7 IGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVARGVDLV 86 (239)
Q Consensus 7 ~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ 86 (239)
..++++++++++.++++||++||. .+|+..... ..+..+..+ ..+...+..+|+.+ +..+++++
T Consensus 103 ~~~~~~~~~~~~~~~~~iV~iSS~-~~~~~~~~~-~~~~~~~~~----------~~~~~~~~~~~~~l----~~~gi~~~ 166 (236)
T 3qvo_A 103 IQANSVIAAMKACDVKRLIFVLSL-GIYDEVPGK-FVEWNNAVI----------GEPLKPFRRAADAI----EASGLEYT 166 (236)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCC-CC---------------------------CGGGHHHHHHHHHH----HTSCSEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEEecc-eecCCCCcc-cccchhhcc----------cchHHHHHHHHHHH----HHCCCCEE
Confidence 467899999999999999999995 888654432 012222221 12233344455544 35699999
Q ss_pred EEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC-CCc-eEEEec
Q 026418 87 VVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS-ASG-RYLCAE 154 (239)
Q Consensus 87 i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~-~~~-~y~~~~ 154 (239)
++||+.++++..... . ....+. .....+++.+|+|++++.++..+. ..+ +|++++
T Consensus 167 ~vrPg~i~~~~~~~~-~-------~~~~~~-----~~~~~~i~~~DvA~~i~~ll~~~~~~~g~~~~i~~ 223 (236)
T 3qvo_A 167 ILRPAWLTDEDIIDY-E-------LTSRNE-----PFKGTIVSRKSVAALITDIIDKPEKHIGENIGINQ 223 (236)
T ss_dssp EEEECEEECCSCCCC-E-------EECTTS-----CCSCSEEEHHHHHHHHHHHHHSTTTTTTEEEEEEC
T ss_pred EEeCCcccCCCCcce-E-------EeccCC-----CCCCcEECHHHHHHHHHHHHcCcccccCeeEEecC
Confidence 999999998743210 0 000010 112358999999999999998765 334 887764
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=98.87 E-value=2.9e-09 Score=83.51 Aligned_cols=141 Identities=21% Similarity=0.132 Sum_probs=96.2
Q ss_pred chhHhHHHHHHHHHHHhc----CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++.+. +-.++|++||. +.+... .+...|+.+|...+.+.+.+
T Consensus 120 ~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~asK~a~~~l~~~l 178 (281)
T 3svt_A 120 VDLNVNGTMYVLKHAAREMVRGGGGSFVGISSI-AASNTH--------------------RWFGAYGVTKSAVDHLMQLA 178 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCH-HHHSCC--------------------TTCTHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCH-HHcCCC--------------------CCChhHHHHHHHHHHHHHHH
Confidence 578999999999988654 33589999996 544211 12567999999999999988
Q ss_pred HHHc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-eEE
Q 026418 78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL 151 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~ 151 (239)
+.+. |+++..++|+.+.++...... ........+....+ ...+.+++|+|+++++++.... ..| +++
T Consensus 179 a~e~~~~gi~vn~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~p------~~r~~~~~dva~~~~~l~s~~~~~itG~~~~ 251 (281)
T 3svt_A 179 ADELGASWVRVNSIRPGLIRTDLVAAIT-ESAELSSDYAMCTP------LPRQGEVEDVANMAMFLLSDAASFVTGQVIN 251 (281)
T ss_dssp HHHHGGGTEEEEEEEECSBCSGGGHHHH-TCHHHHHHHHHHCS------SSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHhhhcCeEEEEEEeCcCcCcchhhcc-cCHHHHHHHHhcCC------CCCCCCHHHHHHHHHHHhCcccCCCCCCEEE
Confidence 7764 599999999999876421100 00112222222222 2456789999999999886432 234 777
Q ss_pred Ee-cCCCC-HHHHHHHHHHhC
Q 026418 152 CA-ESVLH-RGEVVEILAKFF 170 (239)
Q Consensus 152 ~~-~~~~s-~~el~~~i~~~~ 170 (239)
+. |..++ ..++++.+.+.+
T Consensus 252 vdgG~~~~~~~~~~~~~~~~~ 272 (281)
T 3svt_A 252 VDGGQMLRRGPDFSAMLEPVF 272 (281)
T ss_dssp ESTTGGGSCCCCCHHHHHHHH
T ss_pred eCCChhcccCCcchhcccccc
Confidence 76 55555 667788777775
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.87 E-value=1.6e-08 Score=78.85 Aligned_cols=125 Identities=17% Similarity=0.092 Sum_probs=80.5
Q ss_pred chhHhHHHHHHHHHHHhc-------CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA-------KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAA 74 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~-------~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~ 74 (239)
+++|+.++.++++++.+. +..++|++||.++.++... ....|+.+|...+.++
T Consensus 133 ~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------------~~~~Y~asKaa~~~~~ 192 (272)
T 4e3z_A 133 LRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSAT--------------------QYVDYAASKAAIDTFT 192 (272)
T ss_dssp HHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTT--------------------TCHHHHHHHHHHHHHH
T ss_pred HhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCC--------------------CcchhHHHHHHHHHHH
Confidence 678999999999988654 2468999999755443211 2456999999999999
Q ss_pred HHHHHHc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-
Q 026418 75 WEEAVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG- 148 (239)
Q Consensus 75 ~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~- 148 (239)
+.++++. |+++..++||.+.++..... ........+..+. ....+.+++|+|+++++++.... ..|
T Consensus 193 ~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~------~~~~~~~~edvA~~i~~l~s~~~~~~tG~ 264 (272)
T 4e3z_A 193 IGLAREVAAEGIRVNAVRPGIIETDLHASG--GLPDRAREMAPSV------PMQRAGMPEEVADAILYLLSPSASYVTGS 264 (272)
T ss_dssp HHHHHHHGGGTEEEEEEEECSBC--------------------CC------TTSSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred HHHHHHHHHcCcEEEEEecCCCcCCccccc--CChHHHHHHhhcC------CcCCCcCHHHHHHHHHHHhCCccccccCC
Confidence 8887764 89999999999988753221 0011111111111 12346789999999999986432 234
Q ss_pred eEEEec
Q 026418 149 RYLCAE 154 (239)
Q Consensus 149 ~y~~~~ 154 (239)
++++.|
T Consensus 265 ~i~vdg 270 (272)
T 4e3z_A 265 ILNVSG 270 (272)
T ss_dssp EEEEST
T ss_pred EEeecC
Confidence 677764
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=1.2e-08 Score=77.05 Aligned_cols=112 Identities=12% Similarity=0.078 Sum_probs=76.3
Q ss_pred HhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCc-hHHHHHHHHHHHHHHHHHHcCc
Q 026418 5 AVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKN-WYCYGKAVAEKAAWEEAVARGV 83 (239)
Q Consensus 5 Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~-~Y~~sK~~~E~~~~~~~~~~~~ 83 (239)
|+. ++++++++++.+++++|++||. .+|+..+. ...+.. ..... .|+.+|...|.+++ ..++
T Consensus 85 n~~-~~~~~~~~~~~~~~~iv~iSs~-~~~~~~~~----~~~~~~-------~~~~~~~y~~~K~~~e~~~~----~~~i 147 (221)
T 3r6d_A 85 GSD-MASIVKALSRXNIRRVIGVSMA-GLSGEFPV----ALEKWT-------FDNLPISYVQGERQARNVLR----ESNL 147 (221)
T ss_dssp HHH-HHHHHHHHHHTTCCEEEEEEET-TTTSCSCH----HHHHHH-------HHTSCHHHHHHHHHHHHHHH----HSCS
T ss_pred Chh-HHHHHHHHHhcCCCeEEEEeec-eecCCCCc----cccccc-------ccccccHHHHHHHHHHHHHH----hCCC
Confidence 566 9999999999999999999995 77754321 111100 01223 79999999999885 4699
Q ss_pred cEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhh--cCCC
Q 026418 84 DLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVY--ETPS 145 (239)
Q Consensus 84 ~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~--~~~~ 145 (239)
+++++||+.++++........ ..... .....+++.+|+|++++.++ ..+.
T Consensus 148 ~~~~vrpg~v~~~~~~~~~~~--------~~~~~----~~~~~~~~~~dvA~~~~~l~~~~~~~ 199 (221)
T 3r6d_A 148 NYTILRLTWLYNDPEXTDYEL--------IPEGA----QFNDAQVSREAVVKAIFDILHAADET 199 (221)
T ss_dssp EEEEEEECEEECCTTCCCCEE--------ECTTS----CCCCCEEEHHHHHHHHHHHHTCSCCG
T ss_pred CEEEEechhhcCCCCCcceee--------ccCCc----cCCCceeeHHHHHHHHHHHHHhcChh
Confidence 999999999998732211100 00000 11124899999999999999 6654
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=98.85 E-value=4.9e-08 Score=76.25 Aligned_cols=122 Identities=15% Similarity=0.037 Sum_probs=85.5
Q ss_pred chhHhHHHHHHHHHHHhc---CC------CEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA---KV------RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEK 72 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~---~v------~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~ 72 (239)
+++|+.++.++++++.+. +. .++|++||. +.+... .+...|+.+|...+.
T Consensus 133 ~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~asK~a~~~ 191 (276)
T 1mxh_A 133 FGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDA-MTDLPL--------------------PGFCVYTMAKHALGG 191 (276)
T ss_dssp HHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCG-GGGSCC--------------------TTCHHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEECch-hhcCCC--------------------CCCeehHHHHHHHHH
Confidence 578999999999999874 33 799999996 444211 125679999999999
Q ss_pred HHHHHHHHc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CC
Q 026418 73 AAWEEAVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--AS 147 (239)
Q Consensus 73 ~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~ 147 (239)
+.+.++.+. |+++.+++|+.+.++ . ... ......+....+ . .+++.+.+|+|+++++++.... ..
T Consensus 192 l~~~la~e~~~~gi~v~~v~PG~v~t~-~--~~~--~~~~~~~~~~~p--~---~r~~~~~~dva~~v~~l~s~~~~~~t 261 (276)
T 1mxh_A 192 LTRAAALELAPRHIRVNAVAPGLSLLP-P--AMP--QETQEEYRRKVP--L---GQSEASAAQIADAIAFLVSKDAGYIT 261 (276)
T ss_dssp HHHHHHHHHGGGTEEEEEEEESSBSCC-S--SSC--HHHHHHHHTTCT--T---TSCCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHhhcCeEEEEEecCcccCC-c--cCC--HHHHHHHHhcCC--C---CCCCCCHHHHHHHHHHHhCccccCcc
Confidence 999887664 899999999999998 2 111 222233333221 1 1338899999999999886432 23
Q ss_pred c-eEEEec
Q 026418 148 G-RYLCAE 154 (239)
Q Consensus 148 ~-~y~~~~ 154 (239)
| ++++.|
T Consensus 262 G~~~~vdg 269 (276)
T 1mxh_A 262 GTTLKVDG 269 (276)
T ss_dssp SCEEEEST
T ss_pred CcEEEECC
Confidence 4 666664
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.84 E-value=8e-08 Score=74.88 Aligned_cols=125 Identities=17% Similarity=0.075 Sum_probs=88.5
Q ss_pred chhHhHHHHHHHHHH----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++ ++.+..++|++||. +.+... .+...|+.+|...+.+.+.+
T Consensus 115 ~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~asKaa~~~l~~~l 173 (271)
T 3tzq_B 115 FTVNARGTMLMCKYAIPRLISAGGGAIVNISSA-TAHAAY--------------------DMSTAYACTKAAIETLTRYV 173 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCG-GGTSBC--------------------SSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCH-HHcCCC--------------------CCChHHHHHHHHHHHHHHHH
Confidence 578999999999999 66667899999996 443211 23568999999999999998
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-eEE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL 151 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~ 151 (239)
+.+ .|+++..++|+.++++...... .......+....+ ...+...+|+|+++++++.... ..| +++
T Consensus 174 a~e~~~~gi~vn~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~------~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~ 245 (271)
T 3tzq_B 174 ATQYGRHGVRCNAIAPGLVRTPRLEVGL--PQPIVDIFATHHL------AGRIGEPHEIAELVCFLASDRAAFITGQVIA 245 (271)
T ss_dssp HHHHGGGTEEEEEEEECCBCCTTTC-----CHHHHHHHHTTST------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHHhhcCEEEEEEEeCCCcCccccccC--CHHHHHHHHhcCC------CCCCcCHHHHHHHHHHHhCcccCCcCCCEEE
Confidence 877 6899999999999998644221 1122233333222 1346789999999999886432 234 677
Q ss_pred EecC
Q 026418 152 CAES 155 (239)
Q Consensus 152 ~~~~ 155 (239)
+.|.
T Consensus 246 vdGG 249 (271)
T 3tzq_B 246 ADSG 249 (271)
T ss_dssp ESTT
T ss_pred ECCC
Confidence 7644
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.83 E-value=3.4e-08 Score=75.95 Aligned_cols=124 Identities=15% Similarity=0.130 Sum_probs=82.6
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++.. .+..++|++||. +.+... .+...|+.+|.+.+.+++.+
T Consensus 112 ~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~~sK~a~~~~~~~l 170 (249)
T 3f9i_A 112 IDINLKANFILNREAIKKMIQKRYGRIINISSI-VGIAGN--------------------PGQANYCASKAGLIGMTKSL 170 (249)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-CC--CC--------------------SCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccH-HhccCC--------------------CCCchhHHHHHHHHHHHHHH
Confidence 67899999999888743 445799999996 433211 13567999999999999888
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-eEE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL 151 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~ 151 (239)
+.+ .|+++..++|+.+.++..... .......+..+.+ ...+.+++|+|+++++++.... ..| +++
T Consensus 171 a~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~~------~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~ 241 (249)
T 3f9i_A 171 SYEVATRGITVNAVAPGFIKSDMTDKL---NEKQREAIVQKIP------LGTYGIPEDVAYAVAFLASNNASYITGQTLH 241 (249)
T ss_dssp HHHHGGGTEEEEEEEECCBC------C---CHHHHHHHHHHCT------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHHHHcCcEEEEEecCccccCccccc---CHHHHHHHHhcCC------CCCCcCHHHHHHHHHHHcCCccCCccCcEEE
Confidence 765 489999999999987653321 1122222222222 2468889999999999987542 234 777
Q ss_pred EecC
Q 026418 152 CAES 155 (239)
Q Consensus 152 ~~~~ 155 (239)
+.|.
T Consensus 242 vdgG 245 (249)
T 3f9i_A 242 VNGG 245 (249)
T ss_dssp ESTT
T ss_pred ECCC
Confidence 7643
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.83 E-value=2.8e-08 Score=77.08 Aligned_cols=125 Identities=11% Similarity=0.071 Sum_probs=85.2
Q ss_pred chhHhHHHHHHHHHH----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++ ++.+..++|++||. +.++... ..+...|+.+|...+.+.+.+
T Consensus 115 ~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~-~~~~~~~------------------~~~~~~Y~asKaa~~~~~~~l 175 (264)
T 3i4f_A 115 IQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQ-GADSAPG------------------WIYRSAFAAAKVGLVSLTKTV 175 (264)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCT-TGGGCCC------------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHHHHHHhcCCCeEEEEeec-hhcccCC------------------CCCCchhHHHHHHHHHHHHHH
Confidence 678999999999998 56667899999994 4432211 023578999999999999988
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-eEE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL 151 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~ 151 (239)
+.+ .|+++..++|+.++++..... . .......... .....+.+.+|+|+++++++.... ..| +++
T Consensus 176 a~e~~~~gi~v~~v~PG~v~t~~~~~~---~-~~~~~~~~~~-----~p~~r~~~~~dva~~v~~l~s~~~~~itG~~i~ 246 (264)
T 3i4f_A 176 AYEEAEYGITANMVCPGDIIGEMKEAT---I-QEARQLKEHN-----TPIGRSGTGEDIARTISFLCEDDSDMITGTIIE 246 (264)
T ss_dssp HHHHGGGTEEEEEEEECCCCGGGGSCC---H-HHHHHC-------------CCCCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHhhhcCcEEEEEccCCccCccchhc---c-HHHHHHHhhc-----CCCCCCcCHHHHHHHHHHHcCcccCCCCCcEEE
Confidence 776 589999999999998754321 1 1111111111 112347789999999999987542 234 677
Q ss_pred Eec
Q 026418 152 CAE 154 (239)
Q Consensus 152 ~~~ 154 (239)
+.|
T Consensus 247 vdG 249 (264)
T 3i4f_A 247 VTG 249 (264)
T ss_dssp ESC
T ss_pred EcC
Confidence 663
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=98.83 E-value=3.4e-08 Score=74.73 Aligned_cols=126 Identities=11% Similarity=-0.004 Sum_probs=88.2
Q ss_pred chhHhHHHHHHHHHHHhcC--CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~--v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++.++++++.+.- -.++|++||. +.+... .+...|+.+|...+.+.+.++.
T Consensus 88 ~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~-~~~~~~--------------------~~~~~Y~asK~a~~~~~~~la~ 146 (223)
T 3uce_A 88 FDTKFWGAVLAAKHGARYLKQGGSITLTSGM-LSRKVV--------------------ANTYVKAAINAAIEATTKVLAK 146 (223)
T ss_dssp HHHHHHHHHHHHHHHGGGEEEEEEEEEECCG-GGTSCC--------------------TTCHHHHHHHHHHHHHHHHHHH
T ss_pred heeeeeeHHHHHHHHHhhccCCeEEEEecch-hhccCC--------------------CCchHHHHHHHHHHHHHHHHHH
Confidence 5789999999999998753 2489999996 443211 2356799999999999999988
Q ss_pred HcC-ccEEEEecCcccCCCCCCCCChhH-HHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCc-eEEEec
Q 026418 80 ARG-VDLVVVNPVLVLGPLLQSTVNASI-IHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASG-RYLCAE 154 (239)
Q Consensus 80 ~~~-~~~~i~Rp~~v~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~y~~~~ 154 (239)
+.+ +++..++|+.+..+.......... ..........+ ...+.+.+|+|+++++++......| ++++.|
T Consensus 147 e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~dvA~~~~~l~~~~~~tG~~i~vdg 218 (223)
T 3uce_A 147 ELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLP------VGKVGEASDIAMAYLFAIQNSYMTGTVIDVDG 218 (223)
T ss_dssp HHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHST------TCSCBCHHHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred hhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCC------CCCccCHHHHHHHHHHHccCCCCCCcEEEecC
Confidence 765 899999999998875432211111 11222222222 2457789999999999998655555 666663
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=98.83 E-value=2.3e-08 Score=77.79 Aligned_cols=126 Identities=16% Similarity=0.085 Sum_probs=84.9
Q ss_pred chhHhHHHHHHHHHH----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.|+.++++++ ++.+..++|++||. +.+... .+...|+.+|...+.+.+.+
T Consensus 122 ~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~asKaa~~~l~~~l 180 (266)
T 3uxy_A 122 LGVNVEAPFRICRAAIPLMAAAGGGAIVNVASC-WGLRPG--------------------PGHALYCLTKAALASLTQCM 180 (266)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCS-BTTBCC--------------------TTBHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCH-HhCCCC--------------------CCChHHHHHHHHHHHHHHHH
Confidence 579999999999998 55566799999996 433110 23567999999999999988
Q ss_pred HHHc---CccEEEEecCcccCCCCCCC----CChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc
Q 026418 78 AVAR---GVDLVVVNPVLVLGPLLQST----VNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG 148 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~ 148 (239)
+.+. |+++..++||.+.++..... ..........+.+.. ....+.+.+|+|+++++++.... ..|
T Consensus 181 a~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~------p~~r~~~pedvA~~v~~L~s~~~~~itG 254 (266)
T 3uxy_A 181 GMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTV------PLGRIAEPEDIADVVLFLASDAARYLCG 254 (266)
T ss_dssp HHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTS------TTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcC------CCCCCcCHHHHHHHHHHHhCchhcCCcC
Confidence 7764 89999999999987531100 000001112222221 12457899999999999886542 234
Q ss_pred -eEEEec
Q 026418 149 -RYLCAE 154 (239)
Q Consensus 149 -~y~~~~ 154 (239)
++++.|
T Consensus 255 ~~i~vdG 261 (266)
T 3uxy_A 255 SLVEVNG 261 (266)
T ss_dssp CEEEEST
T ss_pred CEEEECc
Confidence 666663
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.82 E-value=2.3e-08 Score=77.45 Aligned_cols=130 Identities=16% Similarity=0.168 Sum_probs=87.1
Q ss_pred chhHhHHHHHHHHHHHhc----C-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----K-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++.++++++.+. + ..++|++||.++.++... .. . +..+...|+.+|...+.+++.
T Consensus 120 ~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-----~~---~------~~~~~~~Y~~sK~a~~~~~~~ 185 (265)
T 1h5q_A 120 YDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQS-----SL---N------GSLTQVFYNSSKAACSNLVKG 185 (265)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEE-----ET---T------EECSCHHHHHHHHHHHHHHHH
T ss_pred HhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccc-----cc---c------ccccccccHHHHHHHHHHHHH
Confidence 578999999999988653 3 478999999633332111 00 0 023467899999999999998
Q ss_pred HHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-eE
Q 026418 77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RY 150 (239)
Q Consensus 77 ~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y 150 (239)
++.+ .|++++++||+.++++..... ............+ ...+++.+|+|+++++++.... ..| +|
T Consensus 186 la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~ 256 (265)
T 1h5q_A 186 LAAEWASAGIRVNALSPGYVNTDQTAHM---DKKIRDHQASNIP------LNRFAQPEEMTGQAILLLSDHATYMTGGEY 256 (265)
T ss_dssp HHHHHGGGTEEEEEEEECSBCCGGGGGS---CHHHHHHHHHTCT------TSSCBCGGGGHHHHHHHHSGGGTTCCSCEE
T ss_pred HHHHHHhcCcEEEEEecCcccccccccc---chhHHHHHHhcCc------ccCCCCHHHHHHHHHhhccCchhcCcCcEE
Confidence 8765 389999999999998753221 1112222222221 1347899999999999886532 234 77
Q ss_pred EEec
Q 026418 151 LCAE 154 (239)
Q Consensus 151 ~~~~ 154 (239)
++.|
T Consensus 257 ~v~g 260 (265)
T 1h5q_A 257 FIDG 260 (265)
T ss_dssp EECT
T ss_pred EecC
Confidence 7764
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.82 E-value=5.3e-08 Score=75.25 Aligned_cols=124 Identities=19% Similarity=0.129 Sum_probs=83.5
Q ss_pred chhHhHHHHHHHHHHHhc----------CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----------KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAE 71 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----------~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E 71 (239)
+++|+.++.++++++.+. +..++|++||.++..+. .+...|+.+|...+
T Consensus 113 ~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asKaa~~ 171 (257)
T 3tpc_A 113 VAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQ---------------------IGQAAYAASKGGVA 171 (257)
T ss_dssp HHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC---------------------TTCHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCC---------------------CCCcchHHHHHHHH
Confidence 578999999999999764 34689999997443321 12567999999999
Q ss_pred HHHHHHHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCc
Q 026418 72 KAAWEEAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASG 148 (239)
Q Consensus 72 ~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~ 148 (239)
.+.+.++.+ .|+++..++||.+.++..... .......+....+ . ...+.+.+|+|+++++++......|
T Consensus 172 ~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~---~~~~~~~~~~~~p--~---~~r~~~~~dva~~v~~l~s~~~itG 243 (257)
T 3tpc_A 172 ALTLPAARELARFGIRVVTIAPGIFDTPMMAGM---PQDVQDALAASVP--F---PPRLGRAEEYAALVKHICENTMLNG 243 (257)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECCBSCC-----------------CCSS--S---SCSCBCHHHHHHHHHHHHHCTTCCS
T ss_pred HHHHHHHHHHHHcCeEEEEEEeCCCCChhhccC---CHHHHHHHHhcCC--C---CCCCCCHHHHHHHHHHHcccCCcCC
Confidence 999888776 689999999999988743211 0011111111111 0 1357889999999999997655555
Q ss_pred -eEEEec
Q 026418 149 -RYLCAE 154 (239)
Q Consensus 149 -~y~~~~ 154 (239)
++++.|
T Consensus 244 ~~i~vdG 250 (257)
T 3tpc_A 244 EVIRLDG 250 (257)
T ss_dssp CEEEEST
T ss_pred cEEEECC
Confidence 666653
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.81 E-value=1.8e-08 Score=78.92 Aligned_cols=131 Identities=16% Similarity=0.131 Sum_probs=85.0
Q ss_pred chhHhHHHHHHHHHHHh----cC-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++.++++++.. .+ -.++|++||. +.+... .....|+.+|...+.+.+.
T Consensus 133 ~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~asKaa~~~~~~~ 191 (280)
T 3pgx_A 133 IGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSS-AGLKAT--------------------PGNGHYSASKHGLTALTNT 191 (280)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCG-GGTSCC--------------------TTBHHHHHHHHHHHHHHHH
T ss_pred HhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcch-hhccCC--------------------CCchhHHHHHHHHHHHHHH
Confidence 57899999999998843 33 4689999996 433111 1256799999999999998
Q ss_pred HHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHc--CCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-
Q 026418 77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLN--GSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG- 148 (239)
Q Consensus 77 ~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~- 148 (239)
++.+ .|+++..++|+.+.++..... .....+..... ......+.....+.+++|+|+++++++.... ..|
T Consensus 192 la~e~~~~gi~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~s~~~~~itG~ 269 (280)
T 3pgx_A 192 LAIELGEYGIRVNSIHPYSVETPMIEPE--AMMEIFARHPSFVHSFPPMPVQPNGFMTADEVADVVAWLAGDGSGTLTGT 269 (280)
T ss_dssp HHHHHGGGTEEEEEEEECSBCSTTCCHH--HHHHHHHHCGGGGGGSCCBTTBCSSCBCHHHHHHHHHHHHSGGGTTCSSC
T ss_pred HHHHhhhcCeEEEEEeeCcccCcccchh--hhhhhhhcCchhhhhhhhcccCCCCCCCHHHHHHHHHHHhCccccCCCCC
Confidence 8776 589999999999998753210 00011111000 0000111111248999999999999886432 334
Q ss_pred eEEEecC
Q 026418 149 RYLCAES 155 (239)
Q Consensus 149 ~y~~~~~ 155 (239)
++++.|.
T Consensus 270 ~i~vdGG 276 (280)
T 3pgx_A 270 QIPVDKG 276 (280)
T ss_dssp EEEESTT
T ss_pred EEEECCC
Confidence 6776654
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.81 E-value=7e-08 Score=75.57 Aligned_cols=130 Identities=17% Similarity=0.137 Sum_probs=85.4
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++. +.+..++|++||. +.+... .+...|+.+|...+.+.+.+
T Consensus 127 ~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~asK~a~~~~~~~l 185 (281)
T 3s55_A 127 IGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSM-LGHSAN--------------------FAQASYVSSKWGVIGLTKCA 185 (281)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG-GGGSCC--------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCh-hhcCCC--------------------CCCchhHHHHHHHHHHHHHH
Confidence 6799999999999963 3456799999996 443211 13567999999999999998
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCC--------ccCCCCCCceehHHHHHHHHHhhcCCC-
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAK--------TYANSVQAYVHVRDVALAHILVYETPS- 145 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~i~v~D~a~~~~~~~~~~~- 145 (239)
+.+ .|+++..++|+.++++...... ....+......... ........+.+.+|+|+++++++....
T Consensus 186 a~e~~~~gi~vn~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~ 263 (281)
T 3s55_A 186 AHDLVGYGITVNAVAPGNIETPMTHNDF--VFGTMRPDLEKPTLKDVESVFASLHLQYAPFLKPEEVTRAVLFLVDEASS 263 (281)
T ss_dssp HHHTGGGTEEEEEEEECSBCSTTTSSHH--HHHC-------CCHHHHHHHHHHHCSSSCSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHhhcCcEEEEEecCcccCccccchh--hhccccccccccchhHHHHHHHhhhccCcCCCCHHHHHHHHHHHcCCccc
Confidence 875 4899999999999988643210 00000000000000 001122568999999999999987542
Q ss_pred -CCc-eEEEec
Q 026418 146 -ASG-RYLCAE 154 (239)
Q Consensus 146 -~~~-~y~~~~ 154 (239)
..| ++++.|
T Consensus 264 ~itG~~i~vdg 274 (281)
T 3s55_A 264 HITGTVLPIDA 274 (281)
T ss_dssp TCCSCEEEEST
T ss_pred CCCCCEEEECC
Confidence 234 777763
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=98.80 E-value=2.2e-08 Score=77.68 Aligned_cols=129 Identities=12% Similarity=-0.010 Sum_probs=87.2
Q ss_pred chhHhHHHHHHHHHHHhcC--CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~--v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++.++++++.+.- -.++|++||. +.+... .+...|+.+|...+.+.+.++.
T Consensus 118 ~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~asK~a~~~~~~~la~ 176 (261)
T 2wyu_A 118 LEVSAYSLVAVARRAEPLLREGGGIVTLTYY-ASEKVV--------------------PKYNVMAIAKAALEASVRYLAY 176 (261)
T ss_dssp HHHHTHHHHHHHHHHTTTEEEEEEEEEEECG-GGTSBC--------------------TTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHhccCCEEEEEecc-cccCCC--------------------CCchHHHHHHHHHHHHHHHHHH
Confidence 5789999999999998752 2589999996 433111 1246799999999999998877
Q ss_pred Hc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-eEEEe
Q 026418 80 AR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYLCA 153 (239)
Q Consensus 80 ~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~ 153 (239)
+. |+++.+++|+.++++..... .........+.+..+ ...+.+++|+|+++++++.... ..| ++++.
T Consensus 177 e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~p------~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vd 249 (261)
T 2wyu_A 177 ELGPKGVRVNAISAGPVRTVAARSI-PGFTKMYDRVAQTAP------LRRNITQEEVGNLGLFLLSPLASGITGEVVYVD 249 (261)
T ss_dssp HHGGGTCEEEEEEECCCCCTGGGGC-TTHHHHHHHHHHHST------TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred HHhhhCcEEEEEeeCCCcCchhhhc-cccHHHHHHHHhcCC------CCCCCCHHHHHHHHHHHcChhhcCCCCCEEEEC
Confidence 64 89999999999998753221 111122222322222 1346789999999999886432 234 67776
Q ss_pred -cCCCC
Q 026418 154 -ESVLH 158 (239)
Q Consensus 154 -~~~~s 158 (239)
|..++
T Consensus 250 gG~~~~ 255 (261)
T 2wyu_A 250 AGYHIM 255 (261)
T ss_dssp TTGGGB
T ss_pred CCcccc
Confidence 43433
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=98.79 E-value=4.7e-08 Score=75.72 Aligned_cols=118 Identities=16% Similarity=0.135 Sum_probs=81.5
Q ss_pred chhHhHHHHHHHHH----HHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVA----AAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a----~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.+++++ +++.+..++|++||. +.+... .+...|+.+|...+.+.+.+
T Consensus 109 ~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~~sK~a~~~~~~~l 167 (260)
T 1nff_A 109 LDVNLTGVFLGIRAVVKPMKEAGRGSIINISSI-EGLAGT--------------------VACHGYTATKFAVRGLTKST 167 (260)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG-GGTSCC--------------------TTBHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeeh-hhcCCC--------------------CCchhHHHHHHHHHHHHHHH
Confidence 57899999665555 455567899999996 444211 12467999999999999988
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-eEE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL 151 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~ 151 (239)
+.+ .|+++.++||+.++++... .. ..... ......+.+.+|+|+++++++.... ..| +++
T Consensus 168 a~e~~~~gi~v~~v~Pg~v~t~~~~--~~-----------~~~~~-~~~~~~~~~~~dvA~~v~~l~s~~~~~~~G~~~~ 233 (260)
T 1nff_A 168 ALELGPSGIRVNSIHPGLVKTPMTD--WV-----------PEDIF-QTALGRAAEPVEVSNLVVYLASDESSYSTGAEFV 233 (260)
T ss_dssp HHHHGGGTEEEEEEEECCBCSGGGT--TS-----------CTTCS-CCSSSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHhCccCcEEEEEEeCCCCCCccc--cc-----------hhhHH-hCccCCCCCHHHHHHHHHHHhCccccCCcCCEEE
Confidence 766 5899999999999987532 00 00000 1112357899999999999886432 234 777
Q ss_pred Eec
Q 026418 152 CAE 154 (239)
Q Consensus 152 ~~~ 154 (239)
+.|
T Consensus 234 v~g 236 (260)
T 1nff_A 234 VDG 236 (260)
T ss_dssp EST
T ss_pred ECC
Confidence 764
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.79 E-value=5.7e-08 Score=76.16 Aligned_cols=131 Identities=15% Similarity=0.141 Sum_probs=82.2
Q ss_pred chhHhHHHHHHHHHH----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++ ++.+..++|++||.++..+. .....|+.+|...+.+.+.+
T Consensus 132 ~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asKaa~~~l~~~l 190 (281)
T 3v2h_A 132 IAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVAS---------------------PFKSAYVAAKHGIMGLTKTV 190 (281)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCC---------------------CCchHHHHHHHHHHHHHHHH
Confidence 678999999999997 44556789999996333211 12467999999999999988
Q ss_pred HHHc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCC----CccCCCCCCceehHHHHHHHHHhhcCCC--CCc
Q 026418 78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSA----KTYANSVQAYVHVRDVALAHILVYETPS--ASG 148 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~ 148 (239)
+.+. |+++..++||.+.++......... ........... ..-+.....+.+++|+|+++++++.... ..|
T Consensus 191 a~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~s~~a~~itG 269 (281)
T 3v2h_A 191 ALEVAESGVTVNSICPGYVLTPLVEKQIPDQ-ARTRGITEEQVINEVMLKGQPTKKFITVEQVASLALYLAGDDAAQITG 269 (281)
T ss_dssp HHHHGGGTEEEEEEEECSBCC-----------------------------CCTTCSCBCHHHHHHHHHHHHSSGGGGCCS
T ss_pred HHHhhhcCcEEEEEECCCCcCcchhhhcchh-hhhcCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHcCCCcCCCCC
Confidence 7763 899999999999987532211100 00000000000 0011224569999999999999886542 234
Q ss_pred -eEEEec
Q 026418 149 -RYLCAE 154 (239)
Q Consensus 149 -~y~~~~ 154 (239)
++++.|
T Consensus 270 ~~i~vdG 276 (281)
T 3v2h_A 270 THVSMDG 276 (281)
T ss_dssp CEEEEST
T ss_pred cEEEECC
Confidence 666664
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=98.78 E-value=1.2e-07 Score=73.37 Aligned_cols=125 Identities=11% Similarity=0.017 Sum_probs=83.8
Q ss_pred chhHhHHHHHHHHHHHhc----C-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----K-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++.++++++.+. + ..++|++||. ..+.. ..+...|+.+|...+.+.+.
T Consensus 113 ~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~-~~~~~--------------------~~~~~~Y~~sK~a~~~~~~~ 171 (261)
T 1gee_A 113 IDTNLTGAFLGSREAIKYFVENDIKGTVINMSSV-HEKIP--------------------WPLFVHYAASKGGMKLMTET 171 (261)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCG-GGTSC--------------------CTTCHHHHHHHHHHHHHHHH
T ss_pred HHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCH-HhcCC--------------------CCCccHHHHHHHHHHHHHHH
Confidence 578999999988877543 4 5799999996 43311 02357899999999999888
Q ss_pred HHHHc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eE
Q 026418 77 EAVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RY 150 (239)
Q Consensus 77 ~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y 150 (239)
++.+. +++++++||+.++++..... .........+....+ ...+++.+|+|++++.++... ...| ++
T Consensus 172 la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~~------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~ 244 (261)
T 1gee_A 172 LALEYAPKGIRVNNIGPGAINTPINAEK-FADPEQRADVESMIP------MGYIGEPEEIAAVAAWLASSEASYVTGITL 244 (261)
T ss_dssp HHHHHGGGTCEEEEEEECSBCSGGGHHH-HHSHHHHHHHHTTCT------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred HHHHhcccCeEEEEEeeCCcCCchhhhc-ccChhHHHHHHhcCC------CCCCcCHHHHHHHHHHHhCccccCCCCcEE
Confidence 87653 89999999999998742110 000111222222211 235889999999999988643 2234 66
Q ss_pred EEec
Q 026418 151 LCAE 154 (239)
Q Consensus 151 ~~~~ 154 (239)
++.|
T Consensus 245 ~v~g 248 (261)
T 1gee_A 245 FADG 248 (261)
T ss_dssp EEST
T ss_pred EEcC
Confidence 6664
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=98.77 E-value=5.2e-08 Score=75.68 Aligned_cols=125 Identities=13% Similarity=-0.013 Sum_probs=86.0
Q ss_pred chhHhHHHHHHHHHHHhcC--CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~--v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++.++++++.+.- -.++|++||. +.+... .+...|+.+|...+.+.+.++.
T Consensus 120 ~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~~sK~a~~~~~~~la~ 178 (265)
T 1qsg_A 120 HDISSYSFVAMAKACRSMLNPGSALLTLSYL-GAERAI--------------------PNYNVMGLAKASLEANVRYMAN 178 (265)
T ss_dssp HHHHTHHHHHHHHHHGGGEEEEEEEEEEECG-GGTSBC--------------------TTTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHhccCCEEEEEcch-hhccCC--------------------CCchHHHHHHHHHHHHHHHHHH
Confidence 5789999999999998752 2489999996 433111 1246799999999999998877
Q ss_pred Hc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-eEEEe
Q 026418 80 AR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYLCA 153 (239)
Q Consensus 80 ~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~ 153 (239)
+. |+++.+++|+.+.++..... .........+..+.+ ...+.+.+|+|+++++++.... ..| ++++.
T Consensus 179 e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~p------~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vd 251 (265)
T 1qsg_A 179 AMGPEGVRVNAISAGPIRTLAASGI-KDFRKMLAHCEAVTP------IRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVD 251 (265)
T ss_dssp HHTTTTEEEEEEEECCCCCTTGGGS-TTHHHHHHHHHHHST------TSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEES
T ss_pred HhhhcCeEEEEEEeCCCccchhhcc-cccHHHHHHHHhcCC------CCCCCCHHHHHHHHHHHhCchhcCccCCEEEEC
Confidence 64 89999999999998753221 111122222322222 1246789999999999886432 234 66666
Q ss_pred c
Q 026418 154 E 154 (239)
Q Consensus 154 ~ 154 (239)
|
T Consensus 252 g 252 (265)
T 1qsg_A 252 G 252 (265)
T ss_dssp T
T ss_pred C
Confidence 4
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=98.77 E-value=2.1e-07 Score=72.30 Aligned_cols=123 Identities=13% Similarity=0.058 Sum_probs=87.2
Q ss_pred chhHhHHHHHHHHHHH-----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA-----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~-----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++.++++++. +.+..++|++||.++.++. .+...|+.+|.+.+.+.+.
T Consensus 132 ~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asKaa~~~~~~~ 190 (267)
T 4iiu_A 132 IHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGN---------------------RGQVNYSAAKAGIIGATKA 190 (267)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCC---------------------TTCHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCC---------------------CCCchhHHHHHHHHHHHHH
Confidence 5789999999999873 4456799999997554432 1256799999998888887
Q ss_pred HHHHc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eE
Q 026418 77 EAVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RY 150 (239)
Q Consensus 77 ~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y 150 (239)
++.+. |+++..++||.+..+..... ...+.......+ ...+.+.+|+|+++++++... ...| ++
T Consensus 191 la~e~~~~gi~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~p------~~~~~~~edva~~~~~L~s~~~~~itG~~i 260 (267)
T 4iiu_A 191 LAIELAKRKITVNCIAPGLIDTGMIEME----ESALKEAMSMIP------MKRMGQAEEVAGLASYLMSDIAGYVTRQVI 260 (267)
T ss_dssp HHHHHGGGTEEEEEEEECSBCSTTCCCC----HHHHHHHHHTCT------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred HHHHHhhcCeEEEEEEEeeecCCccccc----HHHHHHHHhcCC------CCCCcCHHHHHHHHHHHhCCcccCccCCEE
Confidence 77654 89999999999988754322 233344443332 234778999999999988643 2334 66
Q ss_pred EEecC
Q 026418 151 LCAES 155 (239)
Q Consensus 151 ~~~~~ 155 (239)
++.|.
T Consensus 261 ~vdGG 265 (267)
T 4iiu_A 261 SINGG 265 (267)
T ss_dssp EESTT
T ss_pred EeCCC
Confidence 66643
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.76 E-value=4.4e-08 Score=75.09 Aligned_cols=118 Identities=16% Similarity=0.030 Sum_probs=76.6
Q ss_pred chhHhHHHHHHHHHHHhc----------C-----CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----------K-----VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYG 66 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----------~-----v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~s 66 (239)
+++|+.++.++++++.+. + ..++|++||..+.++... +..+ ..+...|+.+
T Consensus 110 ~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------~~~~------~~~~~~Y~~s 175 (250)
T 1yo6_A 110 LDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNT--------SGSA------QFPVLAYRMS 175 (250)
T ss_dssp HHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCC--------STTS------SSCBHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCCcc--------cccc------cCCccHHHHH
Confidence 578999999999887653 4 679999999633332111 1111 1346789999
Q ss_pred HHHHHHHHHHHHHHc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 67 KAVAEKAAWEEAVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 67 K~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
|...+.+++.++.+. |+++.+++|+.+.++.... ..+++.+|+|++++.++..
T Consensus 176 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~------------------------~~~~~~~~~a~~~~~~~~~ 231 (250)
T 1yo6_A 176 KAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK------------------------NAALTVEQSTAELISSFNK 231 (250)
T ss_dssp HHHHHHHHHHHHHHTGGGTCEEEEEECCCC-------------------------------------HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC------------------------CCCCCHHHHHHHHHHHHhc
Confidence 999999999988765 8999999999997653110 1357899999999999976
Q ss_pred CC--CCceEE-EecCCC
Q 026418 144 PS--ASGRYL-CAESVL 157 (239)
Q Consensus 144 ~~--~~~~y~-~~~~~~ 157 (239)
.. ..|.|+ +.+..+
T Consensus 232 ~~~~~~G~~~~~~g~~~ 248 (250)
T 1yo6_A 232 LDNSHNGRFFMRNLKPY 248 (250)
T ss_dssp CCGGGTTCEEETTEEEC
T ss_pred ccccCCCeEEEECCcCC
Confidence 54 245553 334433
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.76 E-value=1.1e-07 Score=74.57 Aligned_cols=125 Identities=11% Similarity=-0.034 Sum_probs=85.0
Q ss_pred chhHhHHHHHHHHHHHhcC---CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK---VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA 78 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~---v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~ 78 (239)
+++|+.|+.++++++.+.- -.++|++||. +.+... .+...|+.+|...+.+.+.++
T Consensus 131 ~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~~sK~a~~~~~~~la 189 (285)
T 2p91_A 131 MDISVYSLIALTRELLPLMEGRNGAIVTLSYY-GAEKVV--------------------PHYNVMGIAKAALESTVRYLA 189 (285)
T ss_dssp HHHHTHHHHHHHHHHGGGGTTSCCEEEEEECG-GGTSBC--------------------TTTTHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHHcCCEEEEEccc-hhccCC--------------------CCccHHHHHHHHHHHHHHHHH
Confidence 5789999999999997753 2699999996 433111 124679999999999998887
Q ss_pred HHc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-eEEE
Q 026418 79 VAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYLC 152 (239)
Q Consensus 79 ~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~ 152 (239)
.+. |+++.+++|+.+.++..... .........+....+ ...+.+++|+|+++++++.... ..| ++++
T Consensus 190 ~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~p------~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~v 262 (285)
T 2p91_A 190 YDIAKHGHRINAISAGPVKTLAAYSI-TGFHLLMEHTTKVNP------FGKPITIEDVGDTAVFLCSDWARAITGEVVHV 262 (285)
T ss_dssp HHHHTTTCEEEEEEECCCCCSCC--C-TTHHHHHHHHHHHST------TSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEE
T ss_pred HHhcccCcEEEEEEeCcccCchhhcc-cchHHHHHHHHhcCC------CCCCcCHHHHHHHHHHHcCCcccCCCCCEEEE
Confidence 663 89999999999998754321 111122222222222 1236789999999999886432 234 6666
Q ss_pred ec
Q 026418 153 AE 154 (239)
Q Consensus 153 ~~ 154 (239)
.|
T Consensus 263 dg 264 (285)
T 2p91_A 263 DN 264 (285)
T ss_dssp ST
T ss_pred CC
Confidence 54
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.76 E-value=3.8e-08 Score=76.81 Aligned_cols=125 Identities=11% Similarity=0.041 Sum_probs=85.5
Q ss_pred chhHhHHHHHHHHHH----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.|+.++++++ ++.+..++|++||. +.+... .+...|+.+|...+.+.+.+
T Consensus 134 ~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~-~~~~~~--------------------~~~~~Y~asKaa~~~l~~~l 192 (273)
T 3uf0_A 134 LTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASM-LSFQGG--------------------RNVAAYAASKHAVVGLTRAL 192 (273)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG-GGTSCC--------------------SSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcch-HhcCCC--------------------CCChhHHHHHHHHHHHHHHH
Confidence 678999999999987 34456799999996 433111 13567999999999999998
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eEE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYL 151 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y~ 151 (239)
+.+ .|+++..++||.+.++...... ........+....+ ...+.+.+|+|+++++++... ...| +++
T Consensus 193 a~e~~~~gI~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~p------~~r~~~pedva~~v~~L~s~~a~~itG~~i~ 265 (273)
T 3uf0_A 193 ASEWAGRGVGVNALAPGYVVTANTAALR-ADDERAAEITARIP------AGRWATPEDMVGPAVFLASDAASYVHGQVLA 265 (273)
T ss_dssp HHHHGGGTEEEEEEEECSBCSGGGHHHH-TSHHHHHHHHHHST------TSSCBCGGGGHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHHhhcCcEEEEEEeCCCcCCchhhcc-cCHHHHHHHHhcCC------CCCCCCHHHHHHHHHHHhCchhcCCcCCEEE
Confidence 876 5899999999999876421100 00112222222222 245778999999999988643 2334 666
Q ss_pred Eec
Q 026418 152 CAE 154 (239)
Q Consensus 152 ~~~ 154 (239)
+.|
T Consensus 266 vdG 268 (273)
T 3uf0_A 266 VDG 268 (273)
T ss_dssp EST
T ss_pred ECc
Confidence 663
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=98.76 E-value=5.9e-08 Score=75.02 Aligned_cols=129 Identities=10% Similarity=-0.032 Sum_probs=83.9
Q ss_pred chhHhHHHHHHHHHH-----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA-----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~-----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++.++++++ ++.+..++|++||. ..+... .....|+.+|...+.+.+.
T Consensus 111 ~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~asKaa~~~l~~~ 169 (257)
T 3imf_A 111 INIVLNGTFYCSQAIGKYWIEKGIKGNIINMVAT-YAWDAG--------------------PGVIHSAAAKAGVLAMTKT 169 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCG-GGGSCC--------------------TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECch-hhccCC--------------------CCcHHHHHHHHHHHHHHHH
Confidence 678999999999998 33346789999996 433111 1256799999999988887
Q ss_pred HHHH----cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-e
Q 026418 77 EAVA----RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-R 149 (239)
Q Consensus 77 ~~~~----~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~ 149 (239)
++.+ .|+++..++||.+.++...............+.... ....+...+|+|+++++++.... ..| +
T Consensus 170 la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~------p~~r~~~pedvA~~v~~L~s~~~~~itG~~ 243 (257)
T 3imf_A 170 LAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSV------PLGRLGTPEEIAGLAYYLCSDEAAYINGTC 243 (257)
T ss_dssp HHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTS------TTCSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred HHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcC------CCCCCcCHHHHHHHHHHHcCchhcCccCCE
Confidence 7643 489999999999988753221100000111121111 12347889999999999886432 234 6
Q ss_pred EEEe-cCCC
Q 026418 150 YLCA-ESVL 157 (239)
Q Consensus 150 y~~~-~~~~ 157 (239)
+++. |..+
T Consensus 244 i~vdGG~~~ 252 (257)
T 3imf_A 244 MTMDGGQHL 252 (257)
T ss_dssp EEESTTTTS
T ss_pred EEECCCccc
Confidence 6666 4433
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=98.76 E-value=1.2e-07 Score=73.31 Aligned_cols=125 Identities=13% Similarity=-0.014 Sum_probs=87.0
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++. +.+..++|++||. +.+... .+...|+.+|...+.+.+.+
T Consensus 110 ~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~asKaa~~~l~~~l 168 (258)
T 3oid_A 110 MNINAKALLFCAQEAAKLMEKNGGGHIVSISSL-GSIRYL--------------------ENYTTVGVSKAALEALTRYL 168 (258)
T ss_dssp HHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEG-GGTSBC--------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCCcEEEEECch-hhCCCC--------------------CCcHHHHHHHHHHHHHHHHH
Confidence 6789999999999884 4456799999996 433111 23578999999999999998
Q ss_pred HHHc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-eEE
Q 026418 78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL 151 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~ 151 (239)
+.+. |+++..++|+.+..+....... ............+ ...+.+.+|+|+++++++.... ..| +++
T Consensus 169 a~e~~~~gi~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~p------~~r~~~~~dva~~v~~L~s~~~~~itG~~i~ 241 (258)
T 3oid_A 169 AVELSPKQIIVNAVSGGAIDTDALKHFPN-REDLLEDARQNTP------AGRMVEIKDMVDTVEFLVSSKADMIRGQTII 241 (258)
T ss_dssp HHHTGGGTEEEEEEEECCBCSGGGGGCTT-HHHHHHHHHHHCT------TSSCBCHHHHHHHHHHHTSSTTTTCCSCEEE
T ss_pred HHHHhhcCcEEEEEeeCCCcChhhhhccc-CHHHHHHHHhcCC------CCCCcCHHHHHHHHHHHhCcccCCccCCEEE
Confidence 8764 7999999999998764322111 1122233333222 2457889999999999987542 234 677
Q ss_pred Eec
Q 026418 152 CAE 154 (239)
Q Consensus 152 ~~~ 154 (239)
+.|
T Consensus 242 vdG 244 (258)
T 3oid_A 242 VDG 244 (258)
T ss_dssp EST
T ss_pred ECC
Confidence 663
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=98.76 E-value=1.2e-07 Score=73.92 Aligned_cols=120 Identities=18% Similarity=0.136 Sum_probs=84.7
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.|+.++++++. +.+..++|++||.++.++. .....|+.+|...+.+.+.+
T Consensus 134 ~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asK~a~~~l~~~l 192 (269)
T 4dmm_A 134 LDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGN---------------------PGQANYSAAKAGVIGLTKTV 192 (269)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCC---------------------CCchhHHHHHHHHHHHHHHH
Confidence 6789999999999874 3456799999997444422 12567999999999998888
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC---CCc-eE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS---ASG-RY 150 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~-~y 150 (239)
+.+ .|+++..++||.+..+.... .....+....+ ...+.+.+|+|+++++++..+. ..| ++
T Consensus 193 a~e~~~~gi~vn~v~PG~v~T~~~~~------~~~~~~~~~~p------~~r~~~~~dvA~~v~~l~s~~~~~~itG~~i 260 (269)
T 4dmm_A 193 AKELASRGITVNAVAPGFIATDMTSE------LAAEKLLEVIP------LGRYGEAAEVAGVVRFLAADPAAAYITGQVI 260 (269)
T ss_dssp HHHHGGGTCEEEEEEECCBTTSCSCH------HHHHHHGGGCT------TSSCBCHHHHHHHHHHHHHCGGGGGCCSCEE
T ss_pred HHHHhhhCcEEEEEEECCCcCccccc------ccHHHHHhcCC------CCCCCCHHHHHHHHHHHhCCcccCCCcCCEE
Confidence 765 48999999999998764321 11122222221 2457889999999999987632 234 67
Q ss_pred EEec
Q 026418 151 LCAE 154 (239)
Q Consensus 151 ~~~~ 154 (239)
++.|
T Consensus 261 ~vdG 264 (269)
T 4dmm_A 261 NIDG 264 (269)
T ss_dssp EEST
T ss_pred EECC
Confidence 7663
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=98.76 E-value=4.4e-08 Score=75.86 Aligned_cols=129 Identities=13% Similarity=0.035 Sum_probs=86.1
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++. +.+..++|++||. +.|... .+...|+.+|...+.+.+.+
T Consensus 120 ~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~~sK~a~~~~~~~l 178 (260)
T 2zat_A 120 LHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSV-GAYHPF--------------------PNLGPYNVSKTALLGLTKNL 178 (260)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCG-GGTSCC--------------------TTBHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHHcCCCEEEEEech-hhcCCC--------------------CCchhHHHHHHHHHHHHHHH
Confidence 5789999999888874 4567899999995 555211 13567999999999999988
Q ss_pred HHHc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-eEE
Q 026418 78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL 151 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~ 151 (239)
+.+. |+++.+++|+.+.++....... .......+.... ....+.+.+|+|+++.+++.... ..| +++
T Consensus 179 a~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~~------~~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~ 251 (260)
T 2zat_A 179 AVELAPRNIRVNCLAPGLIKTNFSQVLWM-DKARKEYMKESL------RIRRLGNPEDCAGIVSFLCSEDASYITGETVV 251 (260)
T ss_dssp HHHHGGGTEEEEEEEECSBCSSTTHHHHS-SHHHHHHHHHHH------TCSSCBCGGGGHHHHHHHTSGGGTTCCSCEEE
T ss_pred HHHhcccCeEEEEEEECcccCccchhccc-ChHHHHHHHhcC------CCCCCCCHHHHHHHHHHHcCcccCCccCCEEE
Confidence 7664 8999999999998764210000 000011111111 12458899999999999886532 234 777
Q ss_pred Ee-cCCCC
Q 026418 152 CA-ESVLH 158 (239)
Q Consensus 152 ~~-~~~~s 158 (239)
+. |...+
T Consensus 252 vdgG~~~s 259 (260)
T 2zat_A 252 VGGGTASR 259 (260)
T ss_dssp ESTTCCCC
T ss_pred ECCCcccc
Confidence 76 55443
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=98.76 E-value=3.6e-08 Score=77.13 Aligned_cols=127 Identities=17% Similarity=0.100 Sum_probs=84.5
Q ss_pred chhHhHHHHHHHHHHHhc------CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA------KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAW 75 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~------~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~ 75 (239)
+++|+.++.++++++.+. +..++|++||.++.++. .+...|+.+|...+.+.+
T Consensus 127 ~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asK~a~~~~~~ 185 (277)
T 2rhc_B 127 VETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGV---------------------VHAAPYSASKHGVVGFTK 185 (277)
T ss_dssp HHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCC---------------------TTCHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCC---------------------CCCccHHHHHHHHHHHHH
Confidence 578999999999997765 55799999996333321 125679999999999999
Q ss_pred HHHHH---cCccEEEEecCcccCCCCCCCCCh--h------HHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 76 EEAVA---RGVDLVVVNPVLVLGPLLQSTVNA--S------IIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 76 ~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~--~------~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
.++.+ .|+++.+++|+.+.++........ . ......+.... ....+++.+|+|+++++++...
T Consensus 186 ~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------p~~r~~~~~dvA~~v~~l~s~~ 259 (277)
T 2rhc_B 186 ALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARV------PIGRYVQPSEVAEMVAYLIGPG 259 (277)
T ss_dssp HHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHS------TTSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcC------CCCCCcCHHHHHHHHHHHhCch
Confidence 88765 379999999999987631100000 0 00011111111 1245889999999999988643
Q ss_pred --CCCc-eEEEecC
Q 026418 145 --SASG-RYLCAES 155 (239)
Q Consensus 145 --~~~~-~y~~~~~ 155 (239)
...| ++++.|.
T Consensus 260 ~~~~tG~~~~vdGG 273 (277)
T 2rhc_B 260 AAAVTAQALNVCGG 273 (277)
T ss_dssp GTTCCSCEEEESTT
T ss_pred hcCCCCcEEEECCC
Confidence 2234 6777643
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.76 E-value=7.7e-08 Score=74.61 Aligned_cols=123 Identities=18% Similarity=0.072 Sum_probs=86.7
Q ss_pred chhHhHHHHHHHHHHHhc----CCCEEEEccchhhh-ccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----KVRRVVFTSSIGAV-YMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----~v~~~i~~Ss~~~v-y~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++.++++++.+. +..++|++||.++. ++. .+...|+.+|...+.+.+.
T Consensus 116 ~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~---------------------~~~~~Y~asK~a~~~l~~~ 174 (262)
T 3pk0_A 116 FAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGY---------------------PGWSHYGATKAAQLGFMRT 174 (262)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCC---------------------TTCHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCC---------------------CCChhhHHHHHHHHHHHHH
Confidence 678999999999988765 66799999996332 110 1356799999999999999
Q ss_pred HHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eE
Q 026418 77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RY 150 (239)
Q Consensus 77 ~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y 150 (239)
++.+ .|+++..++|+.+.++..... .......+.+..+ ...+.+.+|+|+++++++... ...| ++
T Consensus 175 la~e~~~~gi~vn~v~PG~v~t~~~~~~---~~~~~~~~~~~~p------~~r~~~p~dva~~v~~L~s~~~~~itG~~i 245 (262)
T 3pk0_A 175 AAIELAPHKITVNAIMPGNIMTEGLLEN---GEEYIASMARSIP------AGALGTPEDIGHLAAFLATKEAGYITGQAI 245 (262)
T ss_dssp HHHHHGGGTCEEEEEEECSBCCHHHHTT---CHHHHHHHHTTST------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred HHHHHHhhCcEEEEEEeCcCcCcccccc---CHHHHHHHHhcCC------CCCCcCHHHHHHHHHHHhCccccCCcCCEE
Confidence 8877 589999999999988642211 1123333333322 134678999999999988643 2334 66
Q ss_pred EEec
Q 026418 151 LCAE 154 (239)
Q Consensus 151 ~~~~ 154 (239)
++.|
T Consensus 246 ~vdG 249 (262)
T 3pk0_A 246 AVDG 249 (262)
T ss_dssp EEST
T ss_pred EECC
Confidence 6663
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.75 E-value=1.5e-07 Score=72.95 Aligned_cols=124 Identities=13% Similarity=0.030 Sum_probs=81.8
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++.. .+..++|++||.++.++. .+...|+.+|...+.+.+.+
T Consensus 126 ~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asKaa~~~l~~~l 184 (260)
T 3gem_A 126 FSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGS---------------------SKHIAYCATKAGLESLTLSF 184 (260)
T ss_dssp HHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCC---------------------SSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCC---------------------CCcHhHHHHHHHHHHHHHHH
Confidence 67899999999998854 356799999996333211 13567999999999999998
Q ss_pred HHHc--CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCc-eEEEe-
Q 026418 78 AVAR--GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASG-RYLCA- 153 (239)
Q Consensus 78 ~~~~--~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~y~~~- 153 (239)
+.+. ++++..++|+.+..+.... ......+....+ ...+...+|+|++++++++.....| ++++.
T Consensus 185 a~e~~~~Irvn~v~PG~v~t~~~~~-----~~~~~~~~~~~p------~~r~~~~edva~~v~~L~~~~~itG~~i~vdG 253 (260)
T 3gem_A 185 AARFAPLVKVNGIAPALLMFQPKDD-----AAYRANALAKSA------LGIEPGAEVIYQSLRYLLDSTYVTGTTLTVNG 253 (260)
T ss_dssp HHHHTTTCEEEEEEECTTCC--------------------CC------SCCCCCTHHHHHHHHHHHHCSSCCSCEEEEST
T ss_pred HHHHCCCCEEEEEeecccccCCCCC-----HHHHHHHHhcCC------CCCCCCHHHHHHHHHHHhhCCCCCCCEEEECC
Confidence 8765 4899999999997663211 111122222211 1235568999999999987555555 77776
Q ss_pred cCCC
Q 026418 154 ESVL 157 (239)
Q Consensus 154 ~~~~ 157 (239)
|..+
T Consensus 254 G~~~ 257 (260)
T 3gem_A 254 GRHV 257 (260)
T ss_dssp TTTT
T ss_pred Cccc
Confidence 4443
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=98.75 E-value=5.8e-08 Score=74.46 Aligned_cols=117 Identities=16% Similarity=0.114 Sum_probs=74.6
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++. +.+ .++|++||. +.+... .+...|+.+|...+.+.+.+
T Consensus 103 ~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~-~~~~~~--------------------~~~~~Y~asK~a~~~~~~~l 160 (245)
T 3e9n_A 103 LDLNVIVPAELSRQLLPALRAAS-GCVIYINSG-AGNGPH--------------------PGNTIYAASKHALRGLADAF 160 (245)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC-------------------------------CHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCc-ccccCC--------------------CCchHHHHHHHHHHHHHHHH
Confidence 5789999888888764 334 689999996 444211 12567999999999999988
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCceEEEe
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCA 153 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~ 153 (239)
+.+ .|+++..++||.+.++..... ....... + ....+++.+|+|++++.++..+....+|++.
T Consensus 161 a~e~~~~gi~v~~v~PG~v~t~~~~~~-------~~~~~~~----~--~~~~~~~p~dvA~~i~~l~~~~~~~~~~~i~ 226 (245)
T 3e9n_A 161 RKEEANNGIRVSTVSPGPTNTPMLQGL-------MDSQGTN----F--RPEIYIEPKEIANAIRFVIDAGETTQITNVD 226 (245)
T ss_dssp HHHHGGGTCEEEEEEECCC-----------------------------CCGGGSCHHHHHHHHHHHHTSCTTEEEEEEE
T ss_pred HHHhhhcCeEEEEEecCCccCchhhhh-------hhhhhcc----c--ccccCCCHHHHHHHHHHHHcCCCccceeeeE
Confidence 775 589999999999987632110 0000000 1 1234789999999999999877655577665
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.75 E-value=7e-08 Score=74.27 Aligned_cols=124 Identities=9% Similarity=0.052 Sum_probs=82.8
Q ss_pred chhHhHHHHHHH----HHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVI----VAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll----~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++. ..+++.+..++|++||. +.+... .+...|+.+|...+.+.+.+
T Consensus 109 ~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~~sK~a~~~~~~~l 167 (249)
T 1o5i_A 109 IDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSF-SVISPI--------------------ENLYTSNSARMALTGFLKTL 167 (249)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG-GGTSCC--------------------TTBHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcch-HhcCCC--------------------CCCchHHHHHHHHHHHHHHH
Confidence 578998876655 44556667899999995 555211 12567999999999999888
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHH-HHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-eE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHIL-KYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RY 150 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y 150 (239)
+.+ .|+++.+++|+.+.++...... ..... .+....+ ...+.+.+|+|+++++++.... ..| ++
T Consensus 168 a~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~~~~~~~~~p------~~~~~~~~dvA~~i~~l~s~~~~~~tG~~~ 238 (249)
T 1o5i_A 168 SFEVAPYGITVNCVAPGWTETERVKELL---SEEKKKQVESQIP------MRRMAKPEEIASVVAFLCSEKASYLTGQTI 238 (249)
T ss_dssp HHHHGGGTEEEEEEEECSBCCTTHHHHS---CHHHHHHHHTTST------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred HHHhhhcCeEEEEEeeCCCccCcccccc---hhhHHHHHHhcCC------CCCCcCHHHHHHHHHHHcCccccCCCCCEE
Confidence 765 5899999999999887421100 01111 2222211 2457899999999999886432 234 66
Q ss_pred EEecC
Q 026418 151 LCAES 155 (239)
Q Consensus 151 ~~~~~ 155 (239)
++.|.
T Consensus 239 ~vdgG 243 (249)
T 1o5i_A 239 VVDGG 243 (249)
T ss_dssp EESTT
T ss_pred EECCC
Confidence 76643
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=98.75 E-value=3.8e-08 Score=75.68 Aligned_cols=124 Identities=14% Similarity=0.126 Sum_probs=81.5
Q ss_pred chhHhHHHHHHHHHH----HhcCC-CEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKV-RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v-~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++.++.+++ ++.+. .++|++||. ..+... .+...|+.+|...+.+++.
T Consensus 110 ~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~-~~~~~~--------------------~~~~~Y~~sK~a~~~~~~~ 168 (251)
T 1zk4_A 110 LAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSI-EGFVGD--------------------PSLGAYNASKGAVRIMSKS 168 (251)
T ss_dssp HHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCG-GGTSCC--------------------TTCHHHHHHHHHHHHHHHH
T ss_pred HHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCc-hhccCC--------------------CCCccchHHHHHHHHHHHH
Confidence 578999777666554 45566 799999996 544211 1256899999999999988
Q ss_pred HHH-----HcCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-
Q 026418 77 EAV-----ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG- 148 (239)
Q Consensus 77 ~~~-----~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~- 148 (239)
++. ..+++++++||+.++++..... . . .......... .....+++.+|+|++++.++.... ..|
T Consensus 169 ~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~-~-~-~~~~~~~~~~-----~~~~~~~~~~dva~~~~~l~~~~~~~~~G~ 240 (251)
T 1zk4_A 169 AALDCALKDYDVRVNTVHPGYIKTPLVDDL-P-G-AEEAMSQRTK-----TPMGHIGEPNDIAYICVYLASNESKFATGS 240 (251)
T ss_dssp HHHHHHHTTCSEEEEEEEECCBCCHHHHTS-T-T-HHHHHTSTTT-----CTTSSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred HHHHhcccCCCeEEEEEeeCcCcchhhhhc-C-c-hhhhHHHhhc-----CCCCCCcCHHHHHHHHHHHcCcccccccCc
Confidence 765 4589999999999998743211 1 0 1111111111 112358899999999999886532 234
Q ss_pred eEEEec
Q 026418 149 RYLCAE 154 (239)
Q Consensus 149 ~y~~~~ 154 (239)
++++.|
T Consensus 241 ~~~v~g 246 (251)
T 1zk4_A 241 EFVVDG 246 (251)
T ss_dssp EEEEST
T ss_pred EEEECC
Confidence 667664
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.74 E-value=2.2e-07 Score=71.28 Aligned_cols=123 Identities=12% Similarity=0.077 Sum_probs=85.4
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++.+ .+..++|++||.++..+. .+...|+.+|...+.+.+.+
T Consensus 110 ~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~l 168 (247)
T 3lyl_A 110 INTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGN---------------------PGQTNYCAAKAGVIGFSKSL 168 (247)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCC---------------------CCcHHHHHHHHHHHHHHHHH
Confidence 57899999999988754 345699999996443321 12567999999999998888
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-eEE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL 151 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~ 151 (239)
+.+ .|+++..++|+.+..+..... ............+ ...+.+++|+|+++++++.... ..| +++
T Consensus 169 a~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~~------~~~~~~~~dva~~i~~l~s~~~~~~tG~~i~ 239 (247)
T 3lyl_A 169 AYEVASRNITVNVVAPGFIATDMTDKL---TDEQKSFIATKIP------SGQIGEPKDIAAAVAFLASEEAKYITGQTLH 239 (247)
T ss_dssp HHHHGGGTEEEEEEEECSBCCTTTTTS---CHHHHHHHHTTST------TCCCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHHHHcCeEEEEEeeCcEecccchhc---cHHHHHHHhhcCC------CCCCcCHHHHHHHHHHHhCCCcCCccCCEEE
Confidence 765 489999999999987754321 1122222222221 2468899999999999886432 234 777
Q ss_pred Eec
Q 026418 152 CAE 154 (239)
Q Consensus 152 ~~~ 154 (239)
+.|
T Consensus 240 vdg 242 (247)
T 3lyl_A 240 VNG 242 (247)
T ss_dssp EST
T ss_pred ECC
Confidence 763
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.74 E-value=1.1e-07 Score=72.69 Aligned_cols=105 Identities=18% Similarity=0.188 Sum_probs=78.8
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++.+ .+..++|++||. +.+... .+...|+.+|...+.+++.+
T Consensus 114 ~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~-~~~~~~--------------------~~~~~Y~~sK~a~~~~~~~l 172 (244)
T 2bd0_A 114 MNTNLKGTFFLTQALFALMERQHSGHIFFITSV-AATKAF--------------------RHSSIYCMSKFGQRGLVETM 172 (244)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG-GGTSCC--------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecc-hhcCCC--------------------CCCchhHHHHHHHHHHHHHH
Confidence 57899999999998843 456899999995 544211 23577999999999999877
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS 145 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 145 (239)
+.. .|+++.++||+.++++....... .. ...+++.+|+|++++.++..+.
T Consensus 173 a~e~~~~gi~v~~v~Pg~v~t~~~~~~~~------------~~------~~~~~~~~dva~~~~~l~~~~~ 225 (244)
T 2bd0_A 173 RLYARKCNVRITDVQPGAVYTPMWGKVDD------------EM------QALMMMPEDIAAPVVQAYLQPS 225 (244)
T ss_dssp HHHHTTTTEEEEEEEECCBCSTTTCCCCS------------TT------GGGSBCHHHHHHHHHHHHTSCT
T ss_pred HHHhhccCcEEEEEECCCccchhhhhccc------------cc------cccCCCHHHHHHHHHHHHhCCc
Confidence 653 58999999999999985432100 00 1358899999999999997543
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=98.73 E-value=1.2e-07 Score=73.41 Aligned_cols=126 Identities=14% Similarity=0.127 Sum_probs=84.4
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++. +.+..++|++||. +.+... .+...|+.+|...+.+.+.+
T Consensus 115 ~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~~sK~a~~~~~~~l 173 (260)
T 2ae2_A 115 MSINFEAAYHLSVLAHPFLKASERGNVVFISSV-SGALAV--------------------PYEAVYGATKGAMDQLTRCL 173 (260)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCG-GGTSCC--------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcch-hhccCC--------------------CCcchHHHHHHHHHHHHHHH
Confidence 5789999999999984 4567899999996 433211 12467999999999999998
Q ss_pred HHHc---CccEEEEecCcccCCCCCCCC--ChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-e
Q 026418 78 AVAR---GVDLVVVNPVLVLGPLLQSTV--NASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-R 149 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~ 149 (239)
+.+. |+++.+++|+.+.++...... ......+..+....+ ...+.+.+|+|+++++++... ...| +
T Consensus 174 a~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~dvA~~v~~l~s~~~~~~tG~~ 247 (260)
T 2ae2_A 174 AFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCA------LRRMGEPKELAAMVAFLCFPAASYVTGQI 247 (260)
T ss_dssp HHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTST------TCSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred HHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCC------CCCCCCHHHHHHHHHHHcCccccCCCCCE
Confidence 8764 899999999999875311000 000011112222211 245889999999999988643 2234 6
Q ss_pred EEEec
Q 026418 150 YLCAE 154 (239)
Q Consensus 150 y~~~~ 154 (239)
+++.|
T Consensus 248 ~~vdg 252 (260)
T 2ae2_A 248 IYVDG 252 (260)
T ss_dssp EEEST
T ss_pred EEECC
Confidence 66664
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.73 E-value=1.3e-07 Score=72.83 Aligned_cols=131 Identities=13% Similarity=-0.005 Sum_probs=76.2
Q ss_pred chhHhHHHHHHHHHH----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++ ++.+..++|++||. +.+... .+...|+.+|...+.+.+.+
T Consensus 102 ~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~~sK~a~~~~~~~l 160 (250)
T 2fwm_X 102 FAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASD-AAHTPR--------------------IGMSAYGASKAALKSLALSV 160 (250)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCG-GGTSCC--------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHccHHHHHHHHHHHHHHHhcCCCEEEEECch-hhCCCC--------------------CCCchHHHHHHHHHHHHHHH
Confidence 578999999999988 45566899999996 443211 13567999999999999988
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHH-HHHcCCC-CccCCCCCCceehHHHHHHHHHhhcCC--CCCc-e
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHIL-KYLNGSA-KTYANSVQAYVHVRDVALAHILVYETP--SASG-R 149 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~ 149 (239)
+.+ .|+++.+++|+.+.++....... ...... .+..... .........+.+.+|+|+++++++... ...| +
T Consensus 161 a~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~ 239 (250)
T 2fwm_X 161 GLELAGSGVRCNVVSPGSTDTDMQRTLWV-SDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLASDLASHITLQD 239 (250)
T ss_dssp HHHHGGGTCEEEEEEECCC-------------------------------------CHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred HHHhCccCCEEEEEECCcccCcccccccc-ChhHHHHHHhhhhhcccccCCCCCCcCHHHHHHHHHHHhCccccCCCCCE
Confidence 765 48999999999999875321100 000001 1111000 000001124789999999999988653 2334 6
Q ss_pred EEEec
Q 026418 150 YLCAE 154 (239)
Q Consensus 150 y~~~~ 154 (239)
+.+.|
T Consensus 240 i~vdG 244 (250)
T 2fwm_X 240 IVVDG 244 (250)
T ss_dssp EEEST
T ss_pred EEECC
Confidence 66653
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=98.73 E-value=1.1e-07 Score=73.77 Aligned_cols=126 Identities=13% Similarity=0.024 Sum_probs=83.9
Q ss_pred chhHhHHHHHHHHHHHhc----C-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----K-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++.++++++.+. + ..++|++||. ..+... .+...|+.+|...+.+.+.
T Consensus 114 ~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~~sK~a~~~~~~~ 172 (263)
T 3ak4_A 114 FDVNARGVFLANQIACRHFLASNTKGVIVNTASL-AAKVGA--------------------PLLAHYSASKFAVFGWTQA 172 (263)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCG-GGTSCC--------------------TTCHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHhcCCCeEEEEeccc-ccccCC--------------------CCchhHHHHHHHHHHHHHH
Confidence 578999999999888653 4 5799999996 433110 1256799999999999988
Q ss_pred HHHHc---CccEEEEecCcccCCCCCCCCCh---h-----HHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC-
Q 026418 77 EAVAR---GVDLVVVNPVLVLGPLLQSTVNA---S-----IIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP- 144 (239)
Q Consensus 77 ~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~---~-----~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~- 144 (239)
++.+. |+++.++||+.++++........ . ......+.... ....+++.+|+|+++++++...
T Consensus 173 la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------p~~~~~~~~dvA~~v~~l~s~~~ 246 (263)
T 3ak4_A 173 LAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLT------PLGRIEEPEDVADVVVFLASDAA 246 (263)
T ss_dssp HHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTC------TTCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcC------CCCCCcCHHHHHHHHHHHhCccc
Confidence 87663 89999999999987632100000 0 01111121211 1245889999999999988653
Q ss_pred -CCCc-eEEEec
Q 026418 145 -SASG-RYLCAE 154 (239)
Q Consensus 145 -~~~~-~y~~~~ 154 (239)
...| ++++.|
T Consensus 247 ~~~tG~~~~vdg 258 (263)
T 3ak4_A 247 RFMTGQGINVTG 258 (263)
T ss_dssp TTCCSCEEEESS
T ss_pred cCCCCCEEEECc
Confidence 2234 777764
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=98.72 E-value=1.3e-07 Score=73.27 Aligned_cols=124 Identities=19% Similarity=0.135 Sum_probs=83.5
Q ss_pred chhHhHHHHHHHHHHHhc----------CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----------KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAE 71 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----------~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E 71 (239)
+++|+.++.++++++.+. +..++|++||. ..+... .+...|+.+|...+
T Consensus 120 ~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~-~~~~~~--------------------~~~~~Y~~sK~a~~ 178 (265)
T 2o23_A 120 LDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASV-AAFEGQ--------------------VGQAAYSASKGGIV 178 (265)
T ss_dssp HHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCT-HHHHCC--------------------TTCHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCCh-hhcCCC--------------------CCCchhHHHHHHHH
Confidence 578999999999998765 56789999996 544211 12567999999999
Q ss_pred HHHHHHHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCc
Q 026418 72 KAAWEEAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASG 148 (239)
Q Consensus 72 ~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~ 148 (239)
.+.+.++.+ .++++.+++|+.+.++..... .......+....+ . ...+++.+|+|++++.++......|
T Consensus 179 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~--~---~~~~~~~~dva~~~~~l~~~~~~~G 250 (265)
T 2o23_A 179 GMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSL---PEKVCNFLASQVP--F---PSRLGDPAEYAHLVQAIIENPFLNG 250 (265)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECCBCCC-------------CHHHHTCS--S---SCSCBCHHHHHHHHHHHHHCTTCCS
T ss_pred HHHHHHHHHHhhcCcEEEEEEeccccCcccccc---CHHHHHHHHHcCC--C---cCCCCCHHHHHHHHHHHhhcCccCc
Confidence 998887765 489999999999987643210 0001111111111 0 1347899999999999987655555
Q ss_pred -eEEEec
Q 026418 149 -RYLCAE 154 (239)
Q Consensus 149 -~y~~~~ 154 (239)
++.+.|
T Consensus 251 ~~i~vdg 257 (265)
T 2o23_A 251 EVIRLDG 257 (265)
T ss_dssp CEEEEST
T ss_pred eEEEECC
Confidence 666653
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=98.71 E-value=2.1e-07 Score=71.08 Aligned_cols=127 Identities=13% Similarity=0.044 Sum_probs=84.6
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++. +.+..++|++||. +.+.... ..+...|+.+|...+.+.+.+
T Consensus 98 ~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~-~~~~~~~------------------~~~~~~Y~~sK~a~~~~~~~l 158 (239)
T 2ekp_A 98 LYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSV-TTFTAGG------------------PVPIPAYTTAKTALLGLTRAL 158 (239)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG-GGTSCCT------------------TSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHHcCCcEEEEECch-hhccCCC------------------CCCCccHHHHHHHHHHHHHHH
Confidence 5789999999998884 4467899999996 5443210 023578999999999999888
Q ss_pred HHHc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eEE
Q 026418 78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYL 151 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y~ 151 (239)
+.+. |+++.++||+.+.++..... .........+....+ ...+.+.+|+|+++++++... ...| .++
T Consensus 159 a~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~p------~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~ 231 (239)
T 2ekp_A 159 AKEWARLGIRVNLLCPGYVETEFTLPL-RQNPELYEPITARIP------MGRWARPEEIARVAAVLCGDEAEYLTGQAVA 231 (239)
T ss_dssp HHHHGGGTEEEEEEEECSBCSGGGHHH-HTCHHHHHHHHTTCT------TSSCBCHHHHHHHHHHHTSGGGTTCCSCEEE
T ss_pred HHHhhhcCcEEEEEEeCCccCchhhcc-ccCHHHHHHHHhcCC------CCCCcCHHHHHHHHHHHcCchhcCCCCCEEE
Confidence 7764 89999999999987642100 000112222222211 134789999999999988643 2234 556
Q ss_pred Eec
Q 026418 152 CAE 154 (239)
Q Consensus 152 ~~~ 154 (239)
+.|
T Consensus 232 vdg 234 (239)
T 2ekp_A 232 VDG 234 (239)
T ss_dssp EST
T ss_pred ECC
Confidence 554
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=98.71 E-value=1.5e-07 Score=73.53 Aligned_cols=124 Identities=12% Similarity=0.052 Sum_probs=83.9
Q ss_pred chhHhHH----HHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIG----TKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~----t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.+ +++++.++++.+..++|++||. +.+.... ..+...|+.+|...|.+++.+
T Consensus 141 ~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~-~~~~~~~------------------~~~~~~Y~~sK~a~~~~~~~l 201 (279)
T 3ctm_A 141 ISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSI-SGKIVNI------------------PQLQAPYNTAKAACTHLAKSL 201 (279)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCC-TTSCC---------------------CCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCCCeEEEECch-HhccCCC------------------CCCcccHHHHHHHHHHHHHHH
Confidence 5689999 6777888877778899999996 4331100 023567999999999999998
Q ss_pred HHHc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eEE
Q 026418 78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYL 151 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y~ 151 (239)
+.+. + ++.+++|+.+.++..... .......+....+ ...+++.+|+|++++.++... ...| +++
T Consensus 202 a~e~~~~~-~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~p------~~~~~~~~dvA~~~~~l~s~~~~~~tG~~i~ 271 (279)
T 3ctm_A 202 AIEWAPFA-RVNTISPGYIDTDITDFA---SKDMKAKWWQLTP------LGREGLTQELVGGYLYLASNASTFTTGSDVV 271 (279)
T ss_dssp HHHTTTTC-EEEEEEECSBSSTTTSSC---CHHHHHHHHHHST------TCSCBCGGGTHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHhcccC-CEEEEeccCCcccccccc---ChHHHHHHHHhCC------ccCCcCHHHHHHHHHHHhCccccCccCCEEE
Confidence 8763 5 899999999987753211 1122222222111 134789999999999988653 2334 666
Q ss_pred Eec
Q 026418 152 CAE 154 (239)
Q Consensus 152 ~~~ 154 (239)
+.|
T Consensus 272 vdg 274 (279)
T 3ctm_A 272 IDG 274 (279)
T ss_dssp EST
T ss_pred ECC
Confidence 664
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=98.71 E-value=4.7e-08 Score=75.46 Aligned_cols=127 Identities=13% Similarity=0.121 Sum_probs=81.8
Q ss_pred chhHhHHHHHHHHHH----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++.+++ ++.+..++|++||. +.+... .+...|+.+|...+.+.+.+
T Consensus 107 ~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~~sK~a~~~~~~~l 165 (255)
T 2q2v_A 107 IALNLSAVFHGTRLALPGMRARNWGRIINIASV-HGLVGS--------------------TGKAAYVAAKHGVVGLTKVV 165 (255)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCG-GGTSCC--------------------TTBHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCc-hhccCC--------------------CCchhHHHHHHHHHHHHHHH
Confidence 578999766666554 56677899999996 443211 12467999999999999988
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHH---H----HHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIH---I----LKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS-- 145 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~---~----~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~-- 145 (239)
+.+ .|+++.+++|+.++++............ . ..+.... .....+++++|+|+++++++....
T Consensus 166 a~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~p~~~~~~~~dvA~~~~~l~s~~~~~ 240 (255)
T 2q2v_A 166 GLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEK-----QPSLAFVTPEHLGELVLFLCSEAGSQ 240 (255)
T ss_dssp HHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTT-----CTTCCCBCHHHHHHHHHHHTSGGGTT
T ss_pred HHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhcc-----CCCCCCcCHHHHHHHHHHHhCCccCC
Confidence 876 4799999999999886321000000000 0 1110111 112458999999999999886432
Q ss_pred CCc-eEEEec
Q 026418 146 ASG-RYLCAE 154 (239)
Q Consensus 146 ~~~-~y~~~~ 154 (239)
..| ++++.|
T Consensus 241 ~tG~~~~vdg 250 (255)
T 2q2v_A 241 VRGAAWNVDG 250 (255)
T ss_dssp CCSCEEEEST
T ss_pred CCCCEEEECC
Confidence 234 676664
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=98.70 E-value=1.6e-07 Score=72.97 Aligned_cols=117 Identities=21% Similarity=0.184 Sum_probs=80.9
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.|+.++++++. +.+..++|++||. +.+... .+...|+.+|...+.+.+.+
T Consensus 115 ~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~-~~~~~~--------------------~~~~~Y~asK~a~~~~~~~l 173 (266)
T 3p19_A 115 FDVNVLGLLNGMQAVLAPMKARNCGTIINISSI-AGKKTF--------------------PDHAAYCGTKFAVHAISENV 173 (266)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCG-GGTSCC--------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCh-hhCCCC--------------------CCCchHHHHHHHHHHHHHHH
Confidence 6799999999777764 4566899999996 433111 12567999999999999888
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSA 146 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~ 146 (239)
+.+ .|+++..++||.+..+........ ........... ....+++.+|+|+++++++..+..
T Consensus 174 a~e~~~~gi~vn~v~PG~v~T~~~~~~~~~--~~~~~~~~~~~-----~~~r~~~pedvA~av~~l~~~~~~ 238 (266)
T 3p19_A 174 REEVAASNVRVMTIAPSAVKTELLSHTTSQ--QIKDGYDAWRV-----DMGGVLAADDVARAVLFAYQQPQN 238 (266)
T ss_dssp HHHHGGGTCEEEEEEECSBSSSGGGGCSCH--HHHHHHHHHHH-----HTTCCBCHHHHHHHHHHHHHSCTT
T ss_pred HHHhcccCcEEEEEeeCccccchhhcccch--hhhHHHHhhcc-----cccCCCCHHHHHHHHHHHHcCCCC
Confidence 776 489999999999988753322111 11111111000 123478899999999999987654
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=98.70 E-value=1.6e-07 Score=73.35 Aligned_cols=134 Identities=14% Similarity=0.047 Sum_probs=86.7
Q ss_pred chhHhHHHHHHHHHHHhc----C-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----K-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++.++++++... + ..++|++||.++.++.... ..+...|+.+|...+.+.+.
T Consensus 126 ~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----------------~~~~~~Y~asKaa~~~~~~~ 188 (278)
T 3sx2_A 126 IDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSA-----------------DPGSVGYVAAKHGVVGLMRV 188 (278)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCCS-----------------SHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCccC-----------------CCCchHhHHHHHHHHHHHHH
Confidence 679999999999987542 2 4689999997444332110 01246799999999999998
Q ss_pred HHHHc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHc-CCC-CccCC-CCCCceehHHHHHHHHHhhcCC--CCCc
Q 026418 77 EAVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLN-GSA-KTYAN-SVQAYVHVRDVALAHILVYETP--SASG 148 (239)
Q Consensus 77 ~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~-~~~-~~~~~-~~~~~i~v~D~a~~~~~~~~~~--~~~~ 148 (239)
++.+. |+++..++|+.+.++..... .....+..... ... ..++. ....+++.+|+|+++++++... ...|
T Consensus 189 la~e~~~~gi~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~~~p~dvA~~v~~l~s~~~~~itG 266 (278)
T 3sx2_A 189 YANLLAGQMIRVNSIHPSGVETPMINNE--FTREWLAKMAAATDTPGAMGNAMPVEVLAPEDVANAVAWLVSDQARYITG 266 (278)
T ss_dssp HHHHHGGGTEEEEEEEESCBSSTTTSSH--HHHHHHHHHHHHCC--CTTSCSSSCSSBCHHHHHHHHHHHTSGGGTTCCS
T ss_pred HHHHHhccCcEEEEEecCCccCccchhh--hHHHHHhhccchhhhhhhhhhhcCcCcCCHHHHHHHHHHHhCcccccccC
Confidence 87664 69999999999998754321 11111211111 111 11211 1156889999999999988643 2334
Q ss_pred -eEEEec
Q 026418 149 -RYLCAE 154 (239)
Q Consensus 149 -~y~~~~ 154 (239)
++++.|
T Consensus 267 ~~i~vdG 273 (278)
T 3sx2_A 267 VTLPVDA 273 (278)
T ss_dssp CEEEEST
T ss_pred CEEeECC
Confidence 666664
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=98.70 E-value=1.4e-07 Score=72.82 Aligned_cols=127 Identities=14% Similarity=0.090 Sum_probs=84.5
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++. +.+..++|++||. ..+... .+...|+.+|...+.+.+.+
T Consensus 101 ~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~~sK~a~~~~~~~l 159 (254)
T 1zmt_A 101 VEALQIRPFALVNAVASQMKKRKSGHIIFITSA-TPFGPW--------------------KELSTYTSARAGACTLANAL 159 (254)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCS-TTTSCC--------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCc-ccccCC--------------------CCchHHHHHHHHHHHHHHHH
Confidence 5789999999998884 3456799999996 433111 12567999999999999888
Q ss_pred HHHc---CccEEEEecCcccCCCCCCCCChh-----HHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CC
Q 026418 78 AVAR---GVDLVVVNPVLVLGPLLQSTVNAS-----IIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--AS 147 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~ 147 (239)
+.+. |+++..++|+.++|+......... ......+.... + ...+.+.+|+|+++++++.... ..
T Consensus 160 a~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~----p--~~~~~~p~dvA~~v~~l~s~~~~~~t 233 (254)
T 1zmt_A 160 SKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVT----A--LQRLGTQKELGELVAFLASGSCDYLT 233 (254)
T ss_dssp HHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHS----S--SSSCBCHHHHHHHHHHHHTTSCGGGT
T ss_pred HHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhccC----C--CCCCcCHHHHHHHHHHHhCcccCCcc
Confidence 7663 899999999999887643221111 01111111111 1 1237789999999999887543 23
Q ss_pred c-eEEEecC
Q 026418 148 G-RYLCAES 155 (239)
Q Consensus 148 ~-~y~~~~~ 155 (239)
| ++++.|.
T Consensus 234 G~~~~vdgG 242 (254)
T 1zmt_A 234 GQVFWLAGG 242 (254)
T ss_dssp TCEEEESTT
T ss_pred CCEEEECCC
Confidence 4 6666543
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.69 E-value=2.2e-07 Score=72.48 Aligned_cols=126 Identities=14% Similarity=0.160 Sum_probs=81.8
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++. +.+..++|++||. +.+... .+...|+.+|...+.+.+.+
T Consensus 127 ~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~asK~a~~~~~~~l 185 (273)
T 1ae1_A 127 MGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSI-AGFSAL--------------------PSVSLYSASKGAINQMTKSL 185 (273)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCG-GGTSCC--------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCH-hhcCCC--------------------CCcchhHHHHHHHHHHHHHH
Confidence 5789999999999884 4456799999996 554221 12567999999999999888
Q ss_pred HHHc---CccEEEEecCcccCCCCCCCCCh---hHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-
Q 026418 78 AVAR---GVDLVVVNPVLVLGPLLQSTVNA---SIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG- 148 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~- 148 (239)
+.+. |+++.+++|+.++++........ .......+....+ ...+.+.+|+|+++++++... ...|
T Consensus 186 a~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p------~~r~~~p~dvA~~v~~l~s~~~~~~tG~ 259 (273)
T 1ae1_A 186 ACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTP------MGRAGKPQEVSALIAFLCFPAASYITGQ 259 (273)
T ss_dssp HHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHST------TCSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred HHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCC------CCCCcCHHHHHHHHHHHhCccccCcCCC
Confidence 7654 89999999999998753221100 0111222222211 134788999999999988643 2234
Q ss_pred eEEEec
Q 026418 149 RYLCAE 154 (239)
Q Consensus 149 ~y~~~~ 154 (239)
++++.|
T Consensus 260 ~i~vdG 265 (273)
T 1ae1_A 260 IIWADG 265 (273)
T ss_dssp EEEEST
T ss_pred EEEECC
Confidence 666654
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.69 E-value=9.9e-08 Score=73.70 Aligned_cols=125 Identities=12% Similarity=0.087 Sum_probs=82.5
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++.+ .+..++|++||.++.++. .+...|+.+|...+.+.+.+
T Consensus 105 ~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~l 163 (256)
T 2d1y_A 105 LEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAE---------------------QENAAYNASKGGLVNLTRSL 163 (256)
T ss_dssp HHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBC---------------------TTBHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCC---------------------CCChhHHHHHHHHHHHHHHH
Confidence 57899999999988754 457899999996333321 12467999999999999988
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHH-cCCCC-cc--CCCCCCceehHHHHHHHHHhhcCC--CCCc
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYL-NGSAK-TY--ANSVQAYVHVRDVALAHILVYETP--SASG 148 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~-~~~~~-~~--~~~~~~~i~v~D~a~~~~~~~~~~--~~~~ 148 (239)
+.+ .|+++.+++|+.+.++... ..+.... ..... .+ ......+++++|+|+++++++... ...|
T Consensus 164 a~e~~~~gi~v~~v~Pg~v~t~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~s~~~~~~~G 236 (256)
T 2d1y_A 164 ALDLAPLRIRVNAVAPGAIATEAVL-------EAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFITG 236 (256)
T ss_dssp HHHHGGGTEEEEEEEECSBCCHHHH-------HHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHhhcCeEEEEEeeCCccCchhh-------hccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCCC
Confidence 765 3899999999999764210 0000000 00000 01 112346899999999999988654 2234
Q ss_pred -eEEEec
Q 026418 149 -RYLCAE 154 (239)
Q Consensus 149 -~y~~~~ 154 (239)
++++.|
T Consensus 237 ~~~~v~g 243 (256)
T 2d1y_A 237 AILPVDG 243 (256)
T ss_dssp CEEEEST
T ss_pred CEEEECC
Confidence 777763
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=98.69 E-value=8.9e-08 Score=73.77 Aligned_cols=117 Identities=15% Similarity=0.089 Sum_probs=83.8
Q ss_pred chhHhHHHHHHHHHHHhcC--CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~--v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++.++++++.+.- -.++|++||.++.++. .+...|+.+|.+.+.+++.++.
T Consensus 116 ~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~~sKaa~~~~~~~la~ 174 (251)
T 3orf_A 116 IDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRT---------------------SGMIAYGATKAATHHIIKDLAS 174 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC---------------------TTBHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCC---------------------CCCchhHHHHHHHHHHHHHHHH
Confidence 5789999999999998753 2489999996333211 2356799999999999999887
Q ss_pred H-----cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC---CCCCc-eE
Q 026418 80 A-----RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET---PSASG-RY 150 (239)
Q Consensus 80 ~-----~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~---~~~~~-~y 150 (239)
+ .++++..++||.+..+. ........ ....+++.+|+|++++.++.. ....| ++
T Consensus 175 e~~~~~~gi~v~~v~PG~v~t~~-----------~~~~~~~~------~~~~~~~~~dva~~i~~l~~~~~~~~~tG~~i 237 (251)
T 3orf_A 175 ENGGLPAGSTSLGILPVTLDTPT-----------NRKYMSDA------NFDDWTPLSEVAEKLFEWSTNSDSRPTNGSLV 237 (251)
T ss_dssp TTSSSCTTCEEEEEEESCBCCHH-----------HHHHCTTS------CGGGSBCHHHHHHHHHHHHHCGGGCCCTTCEE
T ss_pred HhcccCCCcEEEEEecCcCcCcc-----------hhhhcccc------cccccCCHHHHHHHHHHHhcCccccCCcceEE
Confidence 7 47999999999996541 22222221 124578899999999999977 33345 56
Q ss_pred EEe-cCC
Q 026418 151 LCA-ESV 156 (239)
Q Consensus 151 ~~~-~~~ 156 (239)
++. ++.
T Consensus 238 ~v~~g~~ 244 (251)
T 3orf_A 238 KFETKSK 244 (251)
T ss_dssp EEEEETT
T ss_pred EEecCCc
Confidence 554 443
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=98.68 E-value=2.9e-07 Score=70.75 Aligned_cols=123 Identities=15% Similarity=0.095 Sum_probs=86.1
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++.. .+..++|++||.++.++. .+...|+.+|...+.+.+.+
T Consensus 111 ~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asK~a~~~l~~~l 169 (248)
T 3op4_A 111 METNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGN---------------------AGQANYAAAKAGVIGFTKSM 169 (248)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCC---------------------CCChHHHHHHHHHHHHHHHH
Confidence 67899999999998854 456799999997444421 13577999999999998888
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-eEE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL 151 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~ 151 (239)
+.+ .|+++..++|+.+..+..... ............+ ...+.+.+|+|+++++++.... ..| +++
T Consensus 170 a~e~~~~gi~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~p------~~r~~~p~dva~~v~~L~s~~~~~itG~~i~ 240 (248)
T 3op4_A 170 AREVASRGVTVNTVAPGFIETDMTKAL---NDEQRTATLAQVP------AGRLGDPREIASAVAFLASPEAAYITGETLH 240 (248)
T ss_dssp HHHHGGGTEEEEEEEECSBSSTTTTTS---CHHHHHHHHHTCT------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHHHHhCeEEEEEeeCCCCCchhhhc---CHHHHHHHHhcCC------CCCCcCHHHHHHHHHHHcCCccCCccCcEEE
Confidence 765 489999999999987653221 1122223333322 2457889999999999886432 234 666
Q ss_pred Eec
Q 026418 152 CAE 154 (239)
Q Consensus 152 ~~~ 154 (239)
+.|
T Consensus 241 vdg 243 (248)
T 3op4_A 241 VNG 243 (248)
T ss_dssp EST
T ss_pred ECC
Confidence 664
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=98.68 E-value=1.4e-07 Score=74.32 Aligned_cols=123 Identities=19% Similarity=0.100 Sum_probs=85.5
Q ss_pred chhHhHHHHHHHHHH----HhcCCCEEEEccchhhh-ccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAV-YMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~v-y~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.|+.++++++ ++.+..++|++||.++. ++. .+...|+.+|...+.+.+.
T Consensus 147 ~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~---------------------~~~~~Y~asKaa~~~l~~~ 205 (293)
T 3rih_A 147 LDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGY---------------------PGWSHYGASKAAQLGFMRT 205 (293)
T ss_dssp HHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBC---------------------TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCC---------------------CCCHHHHHHHHHHHHHHHH
Confidence 678999999999998 35566899999996332 211 1357799999999999998
Q ss_pred HHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eE
Q 026418 77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RY 150 (239)
Q Consensus 77 ~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y 150 (239)
++.+ .|+++..++||.++++..... .......+.+..+. ..+...+|+|+++++++... ...| ++
T Consensus 206 la~e~~~~gI~vn~v~PG~v~t~~~~~~---~~~~~~~~~~~~p~------~r~~~p~dvA~~v~fL~s~~a~~itG~~i 276 (293)
T 3rih_A 206 AAIELAPRGVTVNAILPGNILTEGLVDM---GEEYISGMARSIPM------GMLGSPVDIGHLAAFLATDEAGYITGQAI 276 (293)
T ss_dssp HHHHHGGGTCEEEEEEECSBCCHHHHHT---CHHHHHHHHTTSTT------SSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred HHHHHhhhCeEEEEEecCCCcCcchhhc---cHHHHHHHHhcCCC------CCCCCHHHHHHHHHHHhCccccCCCCCEE
Confidence 8776 489999999999998642111 11223333333321 23567899999999988643 2334 66
Q ss_pred EEec
Q 026418 151 LCAE 154 (239)
Q Consensus 151 ~~~~ 154 (239)
++.|
T Consensus 277 ~vdG 280 (293)
T 3rih_A 277 VVDG 280 (293)
T ss_dssp EEST
T ss_pred EECC
Confidence 6663
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=98.68 E-value=1.6e-07 Score=72.51 Aligned_cols=128 Identities=16% Similarity=0.085 Sum_probs=86.9
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++. +.+..++|++||. +.+... .+...|+.+|...+.+.+.+
T Consensus 116 ~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~asKaa~~~~~~~l 174 (256)
T 3gaf_A 116 FKLNLFSLFRLSQLAAPHMQKAGGGAILNISSM-AGENTN--------------------VRMASYGSSKAAVNHLTRNI 174 (256)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCG-GGTCCC--------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCH-HHcCCC--------------------CCchHHHHHHHHHHHHHHHH
Confidence 6789999999999974 4456799999996 433111 13577999999999999988
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eEE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYL 151 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y~ 151 (239)
+.+ .|+++..++|+.+..+...... .......+....+ ...+.+.+|+|+++++++... ...| +++
T Consensus 175 a~e~~~~gi~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~p------~~r~~~~~dva~~~~~L~s~~~~~itG~~i~ 246 (256)
T 3gaf_A 175 AFDVGPMGIRVNAIAPGAIKTDALATVL--TPEIERAMLKHTP------LGRLGEAQDIANAALFLCSPAAAWISGQVLT 246 (256)
T ss_dssp HHHHGGGTEEEEEEEECCBCCHHHHHHC--CHHHHHHHHTTCT------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHHhhhCcEEEEEEEccccCchhhhcc--CHHHHHHHHhcCC------CCCCCCHHHHHHHHHHHcCCcccCccCCEEE
Confidence 776 3899999999999765311000 0112222333222 245788999999999988643 2234 777
Q ss_pred Ee-cCCCC
Q 026418 152 CA-ESVLH 158 (239)
Q Consensus 152 ~~-~~~~s 158 (239)
+. |...+
T Consensus 247 vdgG~~~~ 254 (256)
T 3gaf_A 247 VSGGGVQE 254 (256)
T ss_dssp ESTTSCCC
T ss_pred ECCCcccc
Confidence 76 44444
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=98.68 E-value=1.6e-07 Score=72.71 Aligned_cols=126 Identities=13% Similarity=0.103 Sum_probs=80.5
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++. +.+..++|++||. +.+... .+...|+.+|...+.+.+.+
T Consensus 111 ~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~~sK~a~~~~~~~l 169 (260)
T 1x1t_A 111 LALNLSAVFHGTAAALPHMKKQGFGRIINIASA-HGLVAS--------------------ANKSAYVAAKHGVVGFTKVT 169 (260)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG-GGTSCC--------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcH-HhCcCC--------------------CCCchHHHHHHHHHHHHHHH
Confidence 5789999999988885 3456899999996 433211 12567999999999999988
Q ss_pred HHHc---CccEEEEecCcccCCCCCCCCChh--------HHHHHHH-HcCCCCccCCCCCCceehHHHHHHHHHhhcCC-
Q 026418 78 AVAR---GVDLVVVNPVLVLGPLLQSTVNAS--------IIHILKY-LNGSAKTYANSVQAYVHVRDVALAHILVYETP- 144 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~--------~~~~~~~-~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~- 144 (239)
+.+. |+++..++|+.+.++......... ......+ ... .....+.+.+|+|+++++++...
T Consensus 170 a~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~p~~~~~~p~dva~~~~~l~s~~~ 243 (260)
T 1x1t_A 170 ALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEK------QPSLQFVTPEQLGGTAVFLASDAA 243 (260)
T ss_dssp HHHHTTTTEEEEEEEECCBCC------------------------CHHHH------CTTCCCBCHHHHHHHHHHHHSGGG
T ss_pred HHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhcc------CCCCCCcCHHHHHHHHHHHhChhh
Confidence 7663 899999999999887532110000 0000000 000 01235889999999999988643
Q ss_pred -CCCc-eEEEec
Q 026418 145 -SASG-RYLCAE 154 (239)
Q Consensus 145 -~~~~-~y~~~~ 154 (239)
...| ++++.|
T Consensus 244 ~~~tG~~~~vdg 255 (260)
T 1x1t_A 244 AQITGTTVSVDG 255 (260)
T ss_dssp TTCCSCEEEEST
T ss_pred cCCCCCEEEECC
Confidence 2234 666654
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.67 E-value=1.5e-07 Score=72.57 Aligned_cols=123 Identities=14% Similarity=0.094 Sum_probs=84.1
Q ss_pred chhHhHHHHHHHHHH----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++ ++.+..++|++||.++.++. .+...|+.+|.+.+.+.+.+
T Consensus 119 ~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asK~a~~~~~~~l 177 (256)
T 3ezl_A 119 IDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQ---------------------FGQTNYSTAKAGIHGFTMSL 177 (256)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSC---------------------SCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCC---------------------CCCcccHHHHHHHHHHHHHH
Confidence 678999988887776 44566799999996443321 23578999999999999888
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eEE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYL 151 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y~ 151 (239)
+.+ .|+++..++|+.+..+..... .......+....+ ...+.+.+|+|+++++++... ...| +++
T Consensus 178 a~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~~------~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~ 248 (256)
T 3ezl_A 178 AQEVATKGVTVNTVSPGYIGTDMVKAI---RPDVLEKIVATIP------VRRLGSPDEIGSIVAWLASEESGFSTGADFS 248 (256)
T ss_dssp HHHHGGGTEEEEEEEECSBCCHHHHTS---CHHHHHHHHHHST------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHHHHhCCEEEEEEECcccCcccccc---CHHHHHHHHhcCC------CCCCcCHHHHHHHHHHHhCCcccCCcCcEEE
Confidence 766 489999999999976532211 1122333333222 234778999999999988543 2334 677
Q ss_pred Eec
Q 026418 152 CAE 154 (239)
Q Consensus 152 ~~~ 154 (239)
+.|
T Consensus 249 vdg 251 (256)
T 3ezl_A 249 LNG 251 (256)
T ss_dssp EST
T ss_pred ECC
Confidence 664
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=98.67 E-value=1e-07 Score=73.55 Aligned_cols=146 Identities=15% Similarity=0.072 Sum_probs=80.4
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCC--ccccCCCCCChh------hcccCCchHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPD--DVVDESCWSDLE------FCKNTKNWYCYGKAV 69 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~--~~~~E~~~~~~~------~~~~~~~~Y~~sK~~ 69 (239)
+++|+.++.++++++. +.+..++|++||. +.+......+. ....+.+..... .+..+...|+.+|..
T Consensus 83 ~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 161 (257)
T 1fjh_A 83 VSVNYFGATELMDAFLPALKKGHQPAAVVISSV-ASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNA 161 (257)
T ss_dssp HHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCG-GGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHhhcCCcEEEEECCh-hhhccccccchhhhhhcccchhhhhhhhhcccCCCCccHHHHHHHH
Confidence 6789999999999886 4456899999996 55522111000 000000000000 001234679999999
Q ss_pred HHHHHHHHHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--
Q 026418 70 AEKAAWEEAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP-- 144 (239)
Q Consensus 70 ~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~-- 144 (239)
.+.+.+.++.+ .|+++.+++|+.+.++....... ........... ......+.+.+|+|++++.++..+
T Consensus 162 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~----~~~~~~~~~~~dvA~~~~~l~~~~~~ 235 (257)
T 1fjh_A 162 LTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQ--DPRYGESIAKF----VPPMGRRAEPSEMASVIAFLMSPAAS 235 (257)
T ss_dssp HHHHHHHTHHHHHHTTCEEEEEEECC-----------------------C----CCSTTSCCCTHHHHHHHHHHTSGGGT
T ss_pred HHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhcc--chhHHHHHHhc----ccccCCCCCHHHHHHHHHHHhCchhc
Confidence 99999887765 58999999999998764321100 00011111100 111124789999999999998654
Q ss_pred CCCc-eEEEec
Q 026418 145 SASG-RYLCAE 154 (239)
Q Consensus 145 ~~~~-~y~~~~ 154 (239)
...| .+++.|
T Consensus 236 ~~tG~~~~vdg 246 (257)
T 1fjh_A 236 YVHGAQIVIDG 246 (257)
T ss_dssp TCCSCEEEEST
T ss_pred CCcCCEEEECC
Confidence 2335 566654
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=98.67 E-value=1.7e-07 Score=72.07 Aligned_cols=125 Identities=14% Similarity=0.083 Sum_probs=78.5
Q ss_pred chhHhHHHHHHHHH----HHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVA----AAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a----~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.+++++ +++.+..++|++||. +.+... .+...|+.+|...+.+.+.+
T Consensus 110 ~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~asK~a~~~~~~~l 168 (249)
T 2ew8_A 110 FEINVDSGFLMAKAFVPGMKRNGWGRIINLTST-TYWLKI--------------------EAYTHYISTKAANIGFTRAL 168 (249)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG-GGGSCC--------------------SSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcch-hhccCC--------------------CCchhHHHHHHHHHHHHHHH
Confidence 57899998888877 455567899999996 544211 13567999999999999988
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eEE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYL 151 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y~ 151 (239)
+.+ .|+++.+++|+.+.++........ . ......... . ....+.+.+|+|+++++++... ...| +++
T Consensus 169 a~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~-~~~~~~~~~--~--~~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~ 241 (249)
T 2ew8_A 169 ASDLGKDGITVNAIAPSLVRTATTEASALS--A-MFDVLPNML--Q--AIPRLQVPLDLTGAAAFLASDDASFITGQTLA 241 (249)
T ss_dssp HHHHGGGTEEEEEEEECCC---------------------CTT--S--SSCSCCCTHHHHHHHHHHTSGGGTTCCSCEEE
T ss_pred HHHHHhcCcEEEEEecCcCcCccchhcccc--c-hhhHHHHhh--C--ccCCCCCHHHHHHHHHHHcCcccCCCCCcEEE
Confidence 766 489999999999987643200000 0 001111100 1 1234789999999999988643 2334 666
Q ss_pred Eec
Q 026418 152 CAE 154 (239)
Q Consensus 152 ~~~ 154 (239)
+.|
T Consensus 242 vdG 244 (249)
T 2ew8_A 242 VDG 244 (249)
T ss_dssp ESS
T ss_pred ECC
Confidence 654
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=98.67 E-value=3e-07 Score=71.36 Aligned_cols=124 Identities=15% Similarity=0.106 Sum_probs=81.1
Q ss_pred chhHhHHHHHHHHHHHhc-----CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA-----KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~-----~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++.++++++... +..++|++||. ..+... .+...|+.+|.+.+.+++.
T Consensus 129 ~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~-~~~~~~--------------------~~~~~Y~~sKaa~~~~~~~ 187 (266)
T 3o38_A 129 LNVTLTSVMRATRAALRYFRGVDHGGVIVNNASV-LGWRAQ--------------------HSQSHYAAAKAGVMALTRC 187 (266)
T ss_dssp HHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCG-GGTCCC--------------------TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCH-HHcCCC--------------------CCCchHHHHHHHHHHHHHH
Confidence 578999999999998764 45789999996 433111 2357799999999999998
Q ss_pred HHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eE
Q 026418 77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RY 150 (239)
Q Consensus 77 ~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y 150 (239)
++.+ .|+++..++|+.+..+...... .......+... .....+.+.+|+|+++++++... ...| ++
T Consensus 188 la~e~~~~gi~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~------~~~~r~~~~~dva~~i~~l~s~~~~~~tG~~i 259 (266)
T 3o38_A 188 SAIEAVEFGVRINAVSPSIARHKFLEKTS--SSELLDRLASD------EAFGRAAEPWEVAATIAFLASDYSSYMTGEVV 259 (266)
T ss_dssp HHHHHGGGTEEEEEEEECCCCC-------------------C------CTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred HHHHHHHcCcEEEEEeCCcccchhhhccC--cHHHHHHHHhc------CCcCCCCCHHHHHHHHHHHcCccccCccCCEE
Confidence 8776 5899999999999876422110 00111111111 12345789999999999988643 2334 66
Q ss_pred EEec
Q 026418 151 LCAE 154 (239)
Q Consensus 151 ~~~~ 154 (239)
++.|
T Consensus 260 ~vdg 263 (266)
T 3o38_A 260 SVSS 263 (266)
T ss_dssp EESS
T ss_pred EEcC
Confidence 6654
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=98.66 E-value=6e-08 Score=74.79 Aligned_cols=123 Identities=13% Similarity=0.044 Sum_probs=82.4
Q ss_pred chhHhHHHHHHHHHHHhcC-------CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK-------VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAA 74 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~-------v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~ 74 (239)
+++|+.++.++++++.+.- ..++|++||. +.+... .+...|+.+|...+.+.
T Consensus 104 ~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~~sK~a~~~~~ 162 (254)
T 1sby_A 104 IAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSV-TGFNAI--------------------HQVPVYSASKAAVVSFT 162 (254)
T ss_dssp HHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCG-GGTSCC--------------------TTSHHHHHHHHHHHHHH
T ss_pred heeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECch-hhccCC--------------------CCchHHHHHHHHHHHHH
Confidence 5789999999999986431 3579999996 544211 12567999999999999
Q ss_pred HHHHHH---cCccEEEEecCcccCCCCCCCCChh--HHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCce
Q 026418 75 WEEAVA---RGVDLVVVNPVLVLGPLLQSTVNAS--IIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGR 149 (239)
Q Consensus 75 ~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~ 149 (239)
+.++.. .|+++.+++|+.+.++......... ...+..... ...+.+++|+|++++.++.....+.+
T Consensus 163 ~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dvA~~i~~~~~~~~~G~~ 233 (254)
T 1sby_A 163 NSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLL---------SHPTQTSEQCGQNFVKAIEANKNGAI 233 (254)
T ss_dssp HHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHT---------TSCCEEHHHHHHHHHHHHHHCCTTCE
T ss_pred HHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHh---------cCCCCCHHHHHHHHHHHHHcCCCCCE
Confidence 888765 5899999999999876321100000 000111111 12345899999999998874444337
Q ss_pred EEEec
Q 026418 150 YLCAE 154 (239)
Q Consensus 150 y~~~~ 154 (239)
|++.|
T Consensus 234 ~~v~g 238 (254)
T 1sby_A 234 WKLDL 238 (254)
T ss_dssp EEEET
T ss_pred EEEeC
Confidence 77764
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=98.66 E-value=1.1e-07 Score=74.82 Aligned_cols=134 Identities=13% Similarity=-0.071 Sum_probs=83.2
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+++|+.++.++++++.....+++|++||.++..+..... . ...+..+ ..+...|+.||.+.+.+.+.++++.
T Consensus 112 ~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~-~-~~~~~~~------~~~~~~Y~~sK~a~~~~~~~la~e~ 183 (291)
T 3rd5_A 112 IGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLE-D-LNWRSRR------YSPWLAYSQSKLANLLFTSELQRRL 183 (291)
T ss_dssp HHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSS-C-TTCSSSC------CCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCcc-c-ccccccC------CCCcchHHHHHHHHHHHHHHHHHHH
Confidence 679999999999999998778999999963333322111 0 1111111 2345679999999999998887664
Q ss_pred ---C--ccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCce-EEE
Q 026418 82 ---G--VDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGR-YLC 152 (239)
Q Consensus 82 ---~--~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~-y~~ 152 (239)
| +++..++||.+..+...... ..+....... ...+-....+|+|+++++++..+...|. +.+
T Consensus 184 ~~~g~~i~v~~v~PG~v~T~~~~~~~----~~~~~~~~~~-----~~~~~~~~~~~~A~~~~~l~~~~~~~G~~~~v 251 (291)
T 3rd5_A 184 TAAGSPLRALAAHPGYSHTNLQGASG----RKLGDALMSA-----ATRVVATDADFGARQTLYAASQDLPGDSFVGP 251 (291)
T ss_dssp HHTTCCCEEEEECCSGGGSCC-----------------------------CHHHHHHHHHHHHHHHSCCCTTCEEEE
T ss_pred hhCCCCEEEEEeeCCCCccccccccc----hHHHHHHHHH-----HHHHHhCCHHHHHHHHHHHHcCCCCCCceeCC
Confidence 4 89999999999776432110 0011111000 0112234589999999999887655564 444
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.66 E-value=7.4e-08 Score=76.25 Aligned_cols=125 Identities=10% Similarity=-0.019 Sum_probs=83.6
Q ss_pred chhHhHHHHHHHHHHHhc----CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++.+. +..++|++||. +.++. .....|+.+|...+.+.+.+
T Consensus 128 ~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~-~~~~~---------------------~~~~~Y~~sK~a~~~~~~~l 185 (303)
T 1yxm_A 128 LETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVP-TKAGF---------------------PLAVHSGAARAGVYNLTKSL 185 (303)
T ss_dssp HHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCC-CTTCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEee-cccCC---------------------CcchhhHHHHHHHHHHHHHH
Confidence 578999999999998652 34789999995 43211 12467999999999999888
Q ss_pred HHHc---CccEEEEecCcccCCCCCCCCCh-hHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-eE
Q 026418 78 AVAR---GVDLVVVNPVLVLGPLLQSTVNA-SIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RY 150 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y 150 (239)
+.+. |++++++||+.++|+........ ....+..+.... + ...+.+.+|+|+++++++.... ..| ++
T Consensus 186 a~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~----p--~~~~~~~~dvA~~i~~l~~~~~~~~~G~~~ 259 (303)
T 1yxm_A 186 ALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKI----P--AKRIGVPEEVSSVVCFLLSPAASFITGQSV 259 (303)
T ss_dssp HHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGS----T--TSSCBCTHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred HHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcC----c--ccCCCCHHHHHHHHHHHhCcccccCCCcEE
Confidence 7764 89999999999999842111110 000111111111 1 2348899999999999886432 334 66
Q ss_pred EEec
Q 026418 151 LCAE 154 (239)
Q Consensus 151 ~~~~ 154 (239)
++.|
T Consensus 260 ~v~g 263 (303)
T 1yxm_A 260 DVDG 263 (303)
T ss_dssp EEST
T ss_pred EECC
Confidence 7764
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=98.66 E-value=4.2e-07 Score=70.08 Aligned_cols=121 Identities=19% Similarity=0.095 Sum_probs=79.8
Q ss_pred chhHhHHHHH----HHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKN----VIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~----ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.. ++..+++.+..++|++||. +.+... .+...|+.+|...+.+.+.+
T Consensus 107 ~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~asK~a~~~~~~~l 165 (254)
T 1hdc_A 107 VEINLTGVFIGMKTVIPAMKDAGGGSIVNISSA-AGLMGL--------------------ALTSSYGASKWGVRGLSKLA 165 (254)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG-GGTSCC--------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHHcCCCEEEEECch-hhccCC--------------------CCchhHHHHHHHHHHHHHHH
Confidence 5789999874 4555556667899999996 443211 12567999999999999888
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCcc-CC-CCCCce-ehHHHHHHHHHhhcCC--CCCc-
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY-AN-SVQAYV-HVRDVALAHILVYETP--SASG- 148 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~i-~v~D~a~~~~~~~~~~--~~~~- 148 (239)
+.+ .|+++.++||+.++++.. ..........+ .. ....+. +.+|+|+++++++... ...|
T Consensus 166 a~e~~~~gi~v~~v~Pg~v~t~~~-----------~~~~~~~~~~~~~~~p~~~~~~~~~dvA~~v~~l~s~~~~~~tG~ 234 (254)
T 1hdc_A 166 AVELGTDRIRVNSVHPGMTYTPMT-----------AETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGA 234 (254)
T ss_dssp HHHHGGGTEEEEEEEECSBCCHHH-----------HHHTCCCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGGGTTCCSC
T ss_pred HHHhhhcCeEEEEEecccCcCccc-----------cccchhHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCCCCC
Confidence 765 489999999999987521 11111000001 11 112367 9999999999988643 2234
Q ss_pred eEEEec
Q 026418 149 RYLCAE 154 (239)
Q Consensus 149 ~y~~~~ 154 (239)
++++.|
T Consensus 235 ~~~vdg 240 (254)
T 1hdc_A 235 ELAVDG 240 (254)
T ss_dssp EEEEST
T ss_pred EEEECC
Confidence 666654
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=98.66 E-value=1.9e-07 Score=72.69 Aligned_cols=123 Identities=14% Similarity=0.076 Sum_probs=83.8
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++.+ .+-.++|++||.++.++. .+...|+.+|...+.+.+.+
T Consensus 133 ~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asKaa~~~l~~~l 191 (270)
T 3ftp_A 133 IDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGN---------------------PGQVNYAAAKAGVAGMTRAL 191 (270)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC---------------------TTBHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCC---------------------CCchhHHHHHHHHHHHHHHH
Confidence 67999999999998853 345689999997444321 12567999999999999888
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eEE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYL 151 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y~ 151 (239)
+.+ .|+++..++|+.+..+..... .......+....+ ...+.+.+|+|+++++++... ...| +++
T Consensus 192 a~e~~~~gI~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~p------~~r~~~pedvA~~v~~L~s~~~~~itG~~i~ 262 (270)
T 3ftp_A 192 AREIGSRGITVNCVAPGFIDTDMTKGL---PQEQQTALKTQIP------LGRLGSPEDIAHAVAFLASPQAGYITGTTLH 262 (270)
T ss_dssp HHHHGGGTEEEEEEEECSBCSHHHHHS---CHHHHHHHHTTCT------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHHhhhCeEEEEEEeCCCcCcchhhc---CHHHHHHHHhcCC------CCCCCCHHHHHHHHHHHhCCCcCCccCcEEE
Confidence 776 489999999999976521110 0111222222221 245788999999999988533 2234 677
Q ss_pred Eec
Q 026418 152 CAE 154 (239)
Q Consensus 152 ~~~ 154 (239)
+.|
T Consensus 263 vdG 265 (270)
T 3ftp_A 263 VNG 265 (270)
T ss_dssp EST
T ss_pred ECC
Confidence 763
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=98.65 E-value=1.8e-07 Score=72.36 Aligned_cols=126 Identities=13% Similarity=0.029 Sum_probs=80.8
Q ss_pred chhHhHHHHHHHHHH----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++.+++ ++.+..++|++||. ..+... .+...|+.+|...+.+.+.+
T Consensus 113 ~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~~sK~a~~~~~~~l 171 (260)
T 2z1n_A 113 YRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSV-TLLRPW--------------------QDLALSNIMRLPVIGVVRTL 171 (260)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCG-GGTSCC--------------------TTBHHHHHHTHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCCcEEEEECch-hhcCCC--------------------CCCchhHHHHHHHHHHHHHH
Confidence 578999996666665 45567899999996 544211 12567999999999999888
Q ss_pred HHHc---CccEEEEecCcccCCCCCCCC-------ChhHHH-HHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--
Q 026418 78 AVAR---GVDLVVVNPVLVLGPLLQSTV-------NASIIH-ILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP-- 144 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~~~~~~-------~~~~~~-~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~-- 144 (239)
+.+. |+++.+++|+.++++...... ...... ...+... .+ ...+.+.+|+|+++++++...
T Consensus 172 a~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~p--~~r~~~~~dva~~v~~l~s~~~~ 245 (260)
T 2z1n_A 172 ALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASR----IP--MGRVGKPEELASVVAFLASEKAS 245 (260)
T ss_dssp HHHHGGGTEEEEEEEECHHHHCCCC-----------------------C----CT--TSSCCCHHHHHHHHHHHTSGGGT
T ss_pred HHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhc----CC--CCCccCHHHHHHHHHHHhCcccc
Confidence 7664 899999999999987533100 000000 0111111 11 234789999999999998643
Q ss_pred CCCc-eEEEec
Q 026418 145 SASG-RYLCAE 154 (239)
Q Consensus 145 ~~~~-~y~~~~ 154 (239)
...| ++++.|
T Consensus 246 ~~tG~~i~vdG 256 (260)
T 2z1n_A 246 FITGAVIPVDG 256 (260)
T ss_dssp TCCSCEEEEST
T ss_pred CCCCCEEEeCC
Confidence 2234 666654
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=98.65 E-value=3.2e-07 Score=70.39 Aligned_cols=123 Identities=15% Similarity=0.099 Sum_probs=82.3
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++.+++. +.+..++|++||.++.++. .+...|+.+|...+.+.+.+
T Consensus 110 ~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asK~a~~~~~~~l 168 (246)
T 2uvd_A 110 INTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGN---------------------PGQANYVAAKAGVIGLTKTS 168 (246)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC---------------------TTBHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCC---------------------CCCchHHHHHHHHHHHHHHH
Confidence 5789999777666654 4567899999996444421 12467999999999988877
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-eEE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL 151 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~ 151 (239)
+.+ .|+++.+++|+.+..+....... .....+....+ ...+++.+|+|+++++++.... ..| +++
T Consensus 169 a~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~~~~~~~~~~p------~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~ 239 (246)
T 2uvd_A 169 AKELASRNITVNAIAPGFIATDMTDVLDE---NIKAEMLKLIP------AAQFGEAQDIANAVTFFASDQSKYITGQTLN 239 (246)
T ss_dssp HHHHGGGTEEEEEEEECSBGGGCSSCCCT---THHHHHHHTCT------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHhhhcCeEEEEEEeccccCcchhhcCH---HHHHHHHhcCC------CCCCcCHHHHHHHHHHHcCchhcCCCCCEEE
Confidence 654 48999999999998775322111 11122222221 1348899999999999886432 234 666
Q ss_pred Eec
Q 026418 152 CAE 154 (239)
Q Consensus 152 ~~~ 154 (239)
+.|
T Consensus 240 vdg 242 (246)
T 2uvd_A 240 VDG 242 (246)
T ss_dssp EST
T ss_pred ECc
Confidence 654
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=98.65 E-value=1e-07 Score=74.59 Aligned_cols=126 Identities=13% Similarity=0.042 Sum_probs=84.1
Q ss_pred chhHhHHHHHHHHHHHh------cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE------AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAW 75 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~------~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~ 75 (239)
+++|+.|+.++++++.+ .+..++|++||.++..+. .....|+.+|...+.+.+
T Consensus 129 ~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~---------------------~~~~~Y~asKaa~~~l~~ 187 (279)
T 3sju_A 129 LDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGV---------------------MYAAPYTASKHGVVGFTK 187 (279)
T ss_dssp HHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCC---------------------TTCHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCC---------------------CCChhHHHHHHHHHHHHH
Confidence 57999999999998765 445799999996332211 125679999999999999
Q ss_pred HHHHH---cCccEEEEecCcccCCCCCC-------CCC-hhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 76 EEAVA---RGVDLVVVNPVLVLGPLLQS-------TVN-ASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 76 ~~~~~---~~~~~~i~Rp~~v~G~~~~~-------~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
.++.+ .|+++..++||.+.++.... ... ........+....+ ...+.+.+|+|+++++++...
T Consensus 188 ~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p------~~r~~~pedvA~~v~~L~s~~ 261 (279)
T 3sju_A 188 SVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIP------LGRYSTPEEVAGLVGYLVTDA 261 (279)
T ss_dssp HHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCT------TSSCBCHHHHHHHHHHHTSSG
T ss_pred HHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCC------CCCCCCHHHHHHHHHHHhCcc
Confidence 88776 58999999999997652100 000 00111122222211 245788999999999988653
Q ss_pred C--CCc-eEEEec
Q 026418 145 S--ASG-RYLCAE 154 (239)
Q Consensus 145 ~--~~~-~y~~~~ 154 (239)
. ..| ++++.|
T Consensus 262 a~~itG~~i~vdG 274 (279)
T 3sju_A 262 AASITAQALNVCG 274 (279)
T ss_dssp GGGCCSCEEEEST
T ss_pred ccCcCCcEEEECC
Confidence 2 334 666664
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=98.64 E-value=8.6e-08 Score=76.51 Aligned_cols=121 Identities=13% Similarity=0.022 Sum_probs=70.2
Q ss_pred chhHhHHHHHHHHHHHhcC----------CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK----------VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAE 71 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~----------v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E 71 (239)
+++|+.|+.++++++.... ..++|++||.++..+ . .....|+.||.+.+
T Consensus 115 ~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~-~--------------------~~~~~Y~aSKaal~ 173 (319)
T 3ioy_A 115 LGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLA-A--------------------GSPGIYNTTKFAVR 173 (319)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCC-C--------------------SSSHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccC-C--------------------CCCHHHHHHHHHHH
Confidence 6799999999999886542 357999999644332 1 12467999999666
Q ss_pred HHHHHHHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCC----CccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 72 KAAWEEAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSA----KTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 72 ~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
.+.+.++.+ .|+++++++||.|.++......... ..+........ ..+.......++.+|+|++++.+++.+
T Consensus 174 ~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~vA~~~~~al~~~ 252 (319)
T 3ioy_A 174 GLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRP-DALKGEVKPVDKTAVERLAGVHEFGMEPDVIGARVIEAMKAN 252 (319)
T ss_dssp HHHHHHHHHHGGGTCEEEEECCCCBC------------------------------CCGGGSSBCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCc-hhhcccccchhHHHHHHHHHhhhcCCCHHHHHHHHHHHHHcC
Confidence 666555433 4899999999999876432211100 01110000000 001111112379999999999999865
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=98.64 E-value=1.7e-07 Score=71.95 Aligned_cols=123 Identities=17% Similarity=0.089 Sum_probs=81.6
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++.+ .+..++|++||.++.++. .+...|+.+|...+.+.+.+
T Consensus 109 ~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~l 167 (247)
T 1uzm_A 109 INANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGI---------------------GNQANYAASKAGVIGMARSI 167 (247)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC--------------------------CCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCC---------------------CCChhHHHHHHHHHHHHHHH
Confidence 57899999999998854 457899999996443321 12467999999999998888
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eEE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYL 151 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y~ 151 (239)
+.+ .|+++.+++|+.+.++.... . ............ + ...+.+.+|+|+++++++... ...| +++
T Consensus 168 a~e~~~~gi~v~~v~PG~v~t~~~~~-~--~~~~~~~~~~~~----p--~~~~~~~~dvA~~~~~l~s~~~~~~~G~~i~ 238 (247)
T 1uzm_A 168 ARELSKANVTANVVAPGYIDTDMTRA-L--DERIQQGALQFI----P--AKRVGTPAEVAGVVSFLASEDASYISGAVIP 238 (247)
T ss_dssp HHHHGGGTEEEEEEEECSBCCHHHHH-S--CHHHHHHHGGGC----T--TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHhhhcCcEEEEEEeCCCcccchhh-c--CHHHHHHHHhcC----C--CCCCcCHHHHHHHHHHHcCccccCCcCCEEE
Confidence 765 48999999999997652110 0 011111121111 1 234789999999999988643 2234 666
Q ss_pred Eec
Q 026418 152 CAE 154 (239)
Q Consensus 152 ~~~ 154 (239)
+.|
T Consensus 239 vdg 241 (247)
T 1uzm_A 239 VDG 241 (247)
T ss_dssp EST
T ss_pred ECC
Confidence 654
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=98.64 E-value=1.9e-07 Score=72.64 Aligned_cols=119 Identities=18% Similarity=0.071 Sum_probs=79.8
Q ss_pred chhHhHHHHHHHHHHHhcC--CCEEEEccchhhhccCCCCCC-------CccccCCCCCC-------------hhhcccC
Q 026418 2 VEPAVIGTKNVIVAAAEAK--VRRVVFTSSIGAVYMDPNRSP-------DDVVDESCWSD-------------LEFCKNT 59 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~--v~~~i~~Ss~~~vy~~~~~~~-------~~~~~E~~~~~-------------~~~~~~~ 59 (239)
+++|+.++.++++++.+.- ..++|++||.++.++.....+ ..+++|+++.. ...+..|
T Consensus 110 ~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (276)
T 1wma_A 110 MKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWP 189 (276)
T ss_dssp HHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCC
T ss_pred hheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhccccccchhhhhhhhhhhhhhhcccccccCCCc
Confidence 5789999999999998763 248999999644433111000 00122221100 0000124
Q ss_pred CchHHHHHHHHHHHHHHHHHH-------cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHH
Q 026418 60 KNWYCYGKAVAEKAAWEEAVA-------RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRD 132 (239)
Q Consensus 60 ~~~Y~~sK~~~E~~~~~~~~~-------~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 132 (239)
...|+.+|.+.+.+++.++++ .++++..++|+.+.++.... ..+.+.+|
T Consensus 190 ~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~------------------------~~~~~~~~ 245 (276)
T 1wma_A 190 SSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP------------------------KATKSPEE 245 (276)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT------------------------TCSBCHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc------------------------cccCChhH
Confidence 578999999999999888765 48999999999997653211 23678999
Q ss_pred HHHHHHHhhcCC
Q 026418 133 VALAHILVYETP 144 (239)
Q Consensus 133 ~a~~~~~~~~~~ 144 (239)
+|++++.++..+
T Consensus 246 ~a~~~~~l~~~~ 257 (276)
T 1wma_A 246 GAETPVYLALLP 257 (276)
T ss_dssp HTHHHHHHHSCC
T ss_pred hhhhHhhhhcCc
Confidence 999999998744
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=98.63 E-value=6e-08 Score=74.71 Aligned_cols=121 Identities=12% Similarity=0.090 Sum_probs=62.3
Q ss_pred chhHhHHHHHHHHHH----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++.+++ ++.+..++|++||. +.|. +...|+.+|...+.+.+.+
T Consensus 117 ~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~-~~~~-----------------------~~~~Y~asK~a~~~~~~~l 172 (253)
T 3qiv_A 117 MSVNLDGALWCTRAVYKKMTKRGGGAIVNQSST-AAWL-----------------------YSNYYGLAKVGINGLTQQL 172 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC-----------------------------------CCHHHHHHHHHHH
T ss_pred HhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCc-cccC-----------------------CCchhHHHHHHHHHHHHHH
Confidence 578999966665554 45566799999995 5441 1356999999999999999
Q ss_pred HHHc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-eEE
Q 026418 78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL 151 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~ 151 (239)
+.+. |+++..++|+.+.++...... .......+.++.+ ...+.+++|+|+++++++.... ..| +|+
T Consensus 173 a~e~~~~gi~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~------~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~ 244 (253)
T 3qiv_A 173 SRELGGRNIRINAIAPGPIDTEANRTTT--PKEMVDDIVKGLP------LSRMGTPDDLVGMCLFLLSDEASWITGQIFN 244 (253)
T ss_dssp HHHTTTTTEEEEEEEC---------------------------------------CCHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHHhhcCeEEEEEEecCCcccchhhcC--cHHHHHHHhccCC------CCCCCCHHHHHHHHHHHcCccccCCCCCEEE
Confidence 8875 799999999999987532211 0111222222221 2346678999999999886432 234 777
Q ss_pred Eec
Q 026418 152 CAE 154 (239)
Q Consensus 152 ~~~ 154 (239)
+.|
T Consensus 245 vdg 247 (253)
T 3qiv_A 245 VDG 247 (253)
T ss_dssp C--
T ss_pred ECC
Confidence 763
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.63 E-value=3.1e-07 Score=72.05 Aligned_cols=134 Identities=13% Similarity=-0.027 Sum_probs=84.4
Q ss_pred chhHhHHHHHHHHHH----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.|+.++++++ ++.+..++|++||. +.+.... ..+...|+.+|...+.+.+.+
T Consensus 134 ~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~-~~~~~~~------------------~~~~~~Y~asKaa~~~l~~~l 194 (283)
T 3v8b_A 134 IAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSI-NGTRTFT------------------TPGATAYTATKAAQVAIVQQL 194 (283)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCS-BTTTBCC------------------STTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHHcCCceEEEEcCh-hhccCCC------------------CCCchHHHHHHHHHHHHHHHH
Confidence 679999999999998 55566799999996 3321100 023577999999999999999
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eEE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYL 151 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y~ 151 (239)
+.+ .|+++..++||.+..+........................+.....+...+|+|+++++++... ...| +++
T Consensus 195 a~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~pedvA~~v~fL~s~~a~~itG~~i~ 274 (283)
T 3v8b_A 195 ALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLVSERARHVTGSPVW 274 (283)
T ss_dssp HHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHHHHHHHHHHHTSGGGTTCCSCEEE
T ss_pred HHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCCCCHHHHHHHHHHHcCccccCCcCCEEE
Confidence 876 4789999999999876543211111000000000000001111134678999999999988643 2234 556
Q ss_pred Eec
Q 026418 152 CAE 154 (239)
Q Consensus 152 ~~~ 154 (239)
+.|
T Consensus 275 vdG 277 (283)
T 3v8b_A 275 IDG 277 (283)
T ss_dssp EST
T ss_pred ECc
Confidence 554
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=98.63 E-value=6.4e-07 Score=69.62 Aligned_cols=124 Identities=15% Similarity=0.095 Sum_probs=83.2
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++.. .+..++|++||.++..+. .+...|+.+|.+.+.+.+.+
T Consensus 131 ~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asKaa~~~~~~~l 189 (269)
T 3gk3_A 131 MRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGA---------------------FGQANYASAKAGIHGFTKTL 189 (269)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC---------------------TTBHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCC---------------------CCcchHHHHHHHHHHHHHHH
Confidence 57899999999988753 456799999996443321 13567999999999998888
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-eEE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL 151 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~ 151 (239)
+.+ .|+++..++||.+..+...... ....... .........+.+.+|+|+++++++.... ..| +++
T Consensus 190 a~e~~~~gi~v~~v~PG~v~T~~~~~~~-------~~~~~~~-~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~ 261 (269)
T 3gk3_A 190 ALETAKRGITVNTVSPGYLATAMVEAVP-------QDVLEAK-ILPQIPVGRLGRPDEVAALIAFLCSDDAGFVTGADLA 261 (269)
T ss_dssp HHHHGGGTEEEEEEEECSBCCTTTTC--------------CC-SGGGCTTSSCBCHHHHHHHHHHHTSTTCTTCCSCEEE
T ss_pred HHHhhhcCCEEEEEecCcccchhhhhhc-------hhHHHHH-hhhcCCcCCccCHHHHHHHHHHHhCCCcCCeeCcEEE
Confidence 766 3899999999999876432210 0111100 0001122457789999999999887543 234 677
Q ss_pred Eec
Q 026418 152 CAE 154 (239)
Q Consensus 152 ~~~ 154 (239)
+.|
T Consensus 262 vdg 264 (269)
T 3gk3_A 262 ING 264 (269)
T ss_dssp EST
T ss_pred ECC
Confidence 663
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.63 E-value=2.2e-07 Score=72.75 Aligned_cols=126 Identities=18% Similarity=0.140 Sum_probs=86.3
Q ss_pred chhHhHHHHHHHHHHHhc----------CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----------KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAE 71 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----------~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E 71 (239)
+++|+.++.++++++... +-.++|++||. +.+... .....|+.+|.+.+
T Consensus 137 ~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~asKaa~~ 195 (281)
T 3ppi_A 137 IDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASI-AGYEGQ--------------------IGQTAYAAAKAGVI 195 (281)
T ss_dssp HHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCG-GGTSCC--------------------TTCHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecc-cccCCC--------------------CCCcccHHHHHHHH
Confidence 578999999999988632 23589999996 433111 13577999999999
Q ss_pred HHHHHHHHHc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCc
Q 026418 72 KAAWEEAVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASG 148 (239)
Q Consensus 72 ~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~ 148 (239)
.+.+.++.+. |+++..++|+.+..+..... .......+....+. ...+.+.+|+|+++++++......|
T Consensus 196 ~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~---~~~~~~~~~~~~~~-----~~~~~~pedvA~~v~~l~s~~~~tG 267 (281)
T 3ppi_A 196 GLTIAAARDLSSAGIRVNTIAPGTMKTPIMESV---GEEALAKFAANIPF-----PKRLGTPDEFADAAAFLLTNGYING 267 (281)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTT---CHHHHHHHHHTCCS-----SSSCBCHHHHHHHHHHHHHCSSCCS
T ss_pred HHHHHHHHHHhhcCeEEEEEecCcCCchhhhcc---cHHHHHHHHhcCCC-----CCCCCCHHHHHHHHHHHHcCCCcCC
Confidence 9888887664 89999999999976432111 11223333333321 1457899999999999998665556
Q ss_pred -eEEEe-cCC
Q 026418 149 -RYLCA-ESV 156 (239)
Q Consensus 149 -~y~~~-~~~ 156 (239)
++++. |..
T Consensus 268 ~~i~vdGG~~ 277 (281)
T 3ppi_A 268 EVMRLDGAQR 277 (281)
T ss_dssp CEEEESTTCC
T ss_pred cEEEECCCcc
Confidence 66666 443
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.62 E-value=2.5e-07 Score=71.01 Aligned_cols=127 Identities=17% Similarity=0.132 Sum_probs=84.0
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++.. .+..++|++||. +.+.... .+...|+.+|...+.+.+.+
T Consensus 102 ~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~-~~~~~~~-------------------~~~~~Y~~sK~a~~~~~~~l 161 (246)
T 2ag5_A 102 MNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSV-ASSVKGV-------------------VNRCVYSTTKAAVIGLTKSV 161 (246)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCS-BTTTBCC-------------------TTBHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCceEEEEech-HhCcCCC-------------------CCCccHHHHHHHHHHHHHHH
Confidence 57899999999998753 456899999996 4331110 13567999999999999988
Q ss_pred HHHc---CccEEEEecCcccCCCCCCCC---ChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-
Q 026418 78 AVAR---GVDLVVVNPVLVLGPLLQSTV---NASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG- 148 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~- 148 (239)
+.+. |+++.++||+.++++...... .........+....+ ...+.+.+|+|+++++++.... ..|
T Consensus 162 a~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~dvA~~v~~l~s~~~~~~tG~ 235 (246)
T 2ag5_A 162 AADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQK------TGRFATAEEIAMLCVYLASDESAYVTGN 235 (246)
T ss_dssp HHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCT------TSSCEEHHHHHHHHHHHHSGGGTTCCSC
T ss_pred HHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCC------CCCCCCHHHHHHHHHHHhCccccCCCCC
Confidence 7653 899999999999987321000 000111222222211 1347899999999999886432 234
Q ss_pred eEEEec
Q 026418 149 RYLCAE 154 (239)
Q Consensus 149 ~y~~~~ 154 (239)
++++.|
T Consensus 236 ~i~vdg 241 (246)
T 2ag5_A 236 PVIIDG 241 (246)
T ss_dssp EEEECT
T ss_pred EEEECC
Confidence 666654
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.62 E-value=1.2e-07 Score=73.62 Aligned_cols=134 Identities=12% Similarity=-0.032 Sum_probs=86.9
Q ss_pred chhHhHHHHHHHHHHHhcC--CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~--v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++.++++++...- -.++|++||. +.+... .+...|+.+|.+.+.+.+.++.
T Consensus 125 ~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~asKaa~~~~~~~la~ 183 (271)
T 3ek2_A 125 HDISAYSFPALAKAALPMLSDDASLLTLSYL-GAERAI--------------------PNYNTMGLAKAALEASVRYLAV 183 (271)
T ss_dssp HHHHTTHHHHHHHHHGGGEEEEEEEEEEECG-GGTSBC--------------------TTTTHHHHHHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHHHhccCceEEEEecc-ccccCC--------------------CCccchhHHHHHHHHHHHHHHH
Confidence 5789999999999997752 2589999996 433111 1356799999999999988876
Q ss_pred Hc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eEEEe
Q 026418 80 AR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYLCA 153 (239)
Q Consensus 80 ~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y~~~ 153 (239)
+. |+++..++|+.+..+..... .........+....+ ...+...+|+|+++++++... ...| ++++.
T Consensus 184 e~~~~gi~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~~------~~~~~~pedva~~i~~l~s~~~~~~tG~~i~vd 256 (271)
T 3ek2_A 184 SLGAKGVRVNAISAGPIKTLAASGI-KSFGKILDFVESNSP------LKRNVTIEQVGNAGAFLLSDLASGVTAEVMHVD 256 (271)
T ss_dssp HHHTTTCEEEEEEECCC-----CCC-HHHHHHHHHHHHHST------TSSCCCHHHHHHHHHHHHSGGGTTCCSEEEEES
T ss_pred HHHhcCcEEEEEecCcccchhhhcc-cchHHHHHHHHhcCC------cCCCCCHHHHHHHHHHHcCcccCCeeeeEEEEC
Confidence 53 89999999999987643321 111122222322222 134678999999999998643 2345 66766
Q ss_pred -cCCCCHHHHH
Q 026418 154 -ESVLHRGEVV 163 (239)
Q Consensus 154 -~~~~s~~el~ 163 (239)
|..+++.+++
T Consensus 257 gG~~~~~~~~~ 267 (271)
T 3ek2_A 257 SGFNAVVGGMA 267 (271)
T ss_dssp TTGGGBCCCC-
T ss_pred CCeeeehhhhh
Confidence 5555554443
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.61 E-value=1.6e-07 Score=75.05 Aligned_cols=135 Identities=13% Similarity=0.099 Sum_probs=91.1
Q ss_pred chhHhHHHHHHHHHHHhcCC----------CEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKV----------RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAE 71 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v----------~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E 71 (239)
+++|+.++.++++++...-. .++|++||.++..+. .....|+.+|...+
T Consensus 142 ~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~---------------------~~~~~Y~asKaal~ 200 (322)
T 3qlj_A 142 IAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGS---------------------VGQGNYSAAKAGIA 200 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHHCB---------------------TTCHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHccCC---------------------CCCccHHHHHHHHH
Confidence 67899999999998854311 489999997444321 12567999999999
Q ss_pred HHHHHHHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--C
Q 026418 72 KAAWEEAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--A 146 (239)
Q Consensus 72 ~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~ 146 (239)
.+.+.++.+ .|+++..++|+ +..+........ ... .+.....++..+|+|+++++++.... .
T Consensus 201 ~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~---~~~---------~~~~~~~~~~pedva~~v~~L~s~~~~~i 267 (322)
T 3qlj_A 201 TLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAE---MMA---------TQDQDFDAMAPENVSPLVVWLGSAEARDV 267 (322)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC--------------------CCTTCGGGTHHHHHHHTSGGGGGC
T ss_pred HHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhh---hhh---------ccccccCCCCHHHHHHHHHHHhCccccCC
Confidence 999988876 58999999999 654432211110 000 11122456789999999999886432 2
Q ss_pred Cc-eEEEe-cC-----------------CCCHHHHHHHHHHhC
Q 026418 147 SG-RYLCA-ES-----------------VLHRGEVVEILAKFF 170 (239)
Q Consensus 147 ~~-~y~~~-~~-----------------~~s~~el~~~i~~~~ 170 (239)
.| ++++. |. .+++.|+++.+.+.+
T Consensus 268 tG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~ 310 (322)
T 3qlj_A 268 TGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLL 310 (322)
T ss_dssp CSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHH
T ss_pred CCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHh
Confidence 34 66555 32 347899999999886
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.61 E-value=2.8e-07 Score=72.31 Aligned_cols=138 Identities=14% Similarity=0.165 Sum_probs=87.8
Q ss_pred chhHhHHHHHHHHHHHhcC--CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~--v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++.++++++...- -.++|++||.++..+... . +..+..+ ..+...|+.+|...+.+.+.++.
T Consensus 125 ~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~-~---~~~~~~~------~~~~~~Y~asK~a~~~~~~~la~ 194 (287)
T 3pxx_A 125 FDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQ-P---PGAGGPQ------GPGGAGYSYAKQLVDSYTLQLAA 194 (287)
T ss_dssp HHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHC-C---C-----C------HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccccc-c---ccccccC------CCccchHHHHHHHHHHHHHHHHH
Confidence 6799999999999998752 358999999744443221 1 2233221 12356799999999999999887
Q ss_pred Hc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcC---CC--------CccCCCCCCceehHHHHHHHHHhhcCC-
Q 026418 80 AR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNG---SA--------KTYANSVQAYVHVRDVALAHILVYETP- 144 (239)
Q Consensus 80 ~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~---~~--------~~~~~~~~~~i~v~D~a~~~~~~~~~~- 144 (239)
+. |+++..++||.+..+..... ......... .. .........+.+.+|+|+++++++...
T Consensus 195 e~~~~gi~vn~v~PG~v~T~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~v~fL~s~~a 269 (287)
T 3pxx_A 195 QLAPQSIRANVIHPTNVNTDMLNSA-----PMYRQFRPDLEAPSRADALLAFPAMQAMPTPYVEASDISNAVCFLASDES 269 (287)
T ss_dssp HHGGGTCEEEEEEESSBSSTTTSSH-----HHHHHHCTTSSSCCHHHHHHHGGGGCSSSCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHhhcCcEEEEEecCcccccccccc-----chhhhhccccccchhHHHHhhhhhhcccCCCCCCHHHHHhhHheecchhh
Confidence 75 89999999999988753210 111111100 00 000111156899999999999988543
Q ss_pred -CCCc-eEEEec
Q 026418 145 -SASG-RYLCAE 154 (239)
Q Consensus 145 -~~~~-~y~~~~ 154 (239)
...| ++++.|
T Consensus 270 ~~itG~~i~vdG 281 (287)
T 3pxx_A 270 RYVTGLQFKVDA 281 (287)
T ss_dssp TTCCSCEEEEST
T ss_pred cCCCCceEeECc
Confidence 2334 666663
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=98.61 E-value=1.7e-07 Score=72.56 Aligned_cols=130 Identities=15% Similarity=0.103 Sum_probs=76.9
Q ss_pred chhHhHHHHHHHHHHHhcC--------CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK--------VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKA 73 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~--------v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~ 73 (239)
+++|+.++.++++++...- ..++|++||. ..+... .....|+.+|...+.+
T Consensus 112 ~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~-~~~~~~--------------------~~~~~Y~asKaa~~~~ 170 (261)
T 3n74_A 112 VGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVAST-GAGRPR--------------------PNLAWYNATKGWVVSV 170 (261)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCT-TTTSCC--------------------TTCHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCch-hhcCCC--------------------CCccHHHHHHHHHHHH
Confidence 5789999999988875431 3469999996 433111 1246799999999999
Q ss_pred HHHHHHH---cCccEEEEecCcccCCCCCCCCChhH-HHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCC
Q 026418 74 AWEEAVA---RGVDLVVVNPVLVLGPLLQSTVNASI-IHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SAS 147 (239)
Q Consensus 74 ~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~ 147 (239)
.+.++.+ .++++..++|+.+..+.......... .....+... .....+++.+|+|+++++++... ...
T Consensus 171 ~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~dva~~~~~l~s~~~~~it 244 (261)
T 3n74_A 171 TKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDS------IPMGRLLKPDDLAEAAAFLCSPQASMIT 244 (261)
T ss_dssp HHHHHHHHGGGTEEEEEEEEC-------------------------------CTTSSCCCHHHHHHHHHHHTSGGGTTCC
T ss_pred HHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhc------CCcCCCcCHHHHHHHHHHHcCCcccCcC
Confidence 9988776 48999999999998764322110000 001111111 12345889999999999988533 233
Q ss_pred c-eEEEe-cCCCC
Q 026418 148 G-RYLCA-ESVLH 158 (239)
Q Consensus 148 ~-~y~~~-~~~~s 158 (239)
| ++++. |..++
T Consensus 245 G~~i~vdgG~~~~ 257 (261)
T 3n74_A 245 GVALDVDGGRSIG 257 (261)
T ss_dssp SCEEEESTTTTC-
T ss_pred CcEEEecCCcccC
Confidence 4 67776 44443
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=98.61 E-value=1.3e-07 Score=73.95 Aligned_cols=126 Identities=13% Similarity=0.045 Sum_probs=84.4
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++.. .+..++|++||.++..+. .....|+.+|...+.+.+.+
T Consensus 133 ~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asKaa~~~l~~~l 191 (277)
T 4fc7_A 133 MDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQ---------------------ALQVHAGSAKAAVDAMTRHL 191 (277)
T ss_dssp HHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCC---------------------CCcHHHHHHHHHHHHHHHHH
Confidence 67999999999998843 335689999996444321 12467999999999999988
Q ss_pred HHHc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eEE
Q 026418 78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYL 151 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y~ 151 (239)
+.+. |+++..++||.+.++............+.......+ ...+...+|+|+++++++... ...| +++
T Consensus 192 a~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p------~~r~~~p~dvA~~v~fL~s~~~~~itG~~i~ 265 (277)
T 4fc7_A 192 AVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASP------LQRLGNKTEIAHSVLYLASPLASYVTGAVLV 265 (277)
T ss_dssp HHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTST------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCC------CCCCcCHHHHHHHHHHHcCCccCCcCCCEEE
Confidence 7764 899999999999876310000000122222322222 234778999999999988642 2334 666
Q ss_pred Eec
Q 026418 152 CAE 154 (239)
Q Consensus 152 ~~~ 154 (239)
+.|
T Consensus 266 vdG 268 (277)
T 4fc7_A 266 ADG 268 (277)
T ss_dssp EST
T ss_pred ECC
Confidence 653
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.61 E-value=2.3e-07 Score=72.94 Aligned_cols=114 Identities=14% Similarity=0.077 Sum_probs=78.3
Q ss_pred chhHhHHHHHHHHHH----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.|+.++++++ ++.+..++|++||.++..+. .....|+.+|...+.+.+.+
T Consensus 144 ~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~---------------------~~~~~Y~asKaa~~~l~~~l 202 (287)
T 3rku_A 144 FDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAY---------------------PTGSIYCASKFAVGAFTDSL 202 (287)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCC---------------------CCCchHHHHHHHHHHHHHHH
Confidence 679999999999998 44456799999996333211 13567999999999999999
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS 145 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 145 (239)
+.+ .|+++..++||.+..+................... ...+..+|+|+++++++....
T Consensus 203 a~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~---------~~p~~pedvA~~v~~l~s~~~ 264 (287)
T 3rku_A 203 RKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKD---------TTPLMADDVADLIVYATSRKQ 264 (287)
T ss_dssp HHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHTT---------SCCEEHHHHHHHHHHHHTSCT
T ss_pred HHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhcc---------cCCCCHHHHHHHHHHHhCCCC
Confidence 877 58999999999997652100000001111121211 123489999999999997654
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.60 E-value=5.6e-07 Score=70.42 Aligned_cols=131 Identities=14% Similarity=-0.005 Sum_probs=87.4
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.|+.++++++.. .+..++|++||. ..+... ..+...|+.+|...+.+.+.+
T Consensus 114 ~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~-~~~~~~-------------------~~~~~~Y~asKaa~~~l~~~l 173 (280)
T 3tox_A 114 LDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSF-VGHTAG-------------------FAGVAPYAASKAGLIGLVQAL 173 (280)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCS-BTTTBC-------------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCh-hhCcCC-------------------CCCchhHHHHHHHHHHHHHHH
Confidence 67899999999998754 345699999995 433110 023577999999999999988
Q ss_pred HHHc---CccEEEEecCcccCCCCCCCCC-hhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-eE
Q 026418 78 AVAR---GVDLVVVNPVLVLGPLLQSTVN-ASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RY 150 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y 150 (239)
+.+. |+++..++||.+.++....... ........+....+ ...+.+.+|+|+++++++.... ..| ++
T Consensus 174 a~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p------~~r~~~pedvA~~v~~L~s~~a~~itG~~i 247 (280)
T 3tox_A 174 AVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHA------LKRIARPEEIAEAALYLASDGASFVTGAAL 247 (280)
T ss_dssp HHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTST------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred HHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCc------cCCCcCHHHHHHHHHHHhCccccCCcCcEE
Confidence 7764 8999999999998875322110 01112222222221 2357889999999999886532 334 67
Q ss_pred EEe-cCCCC
Q 026418 151 LCA-ESVLH 158 (239)
Q Consensus 151 ~~~-~~~~s 158 (239)
++. |..++
T Consensus 248 ~vdGG~~~~ 256 (280)
T 3tox_A 248 LADGGASVT 256 (280)
T ss_dssp EESTTGGGC
T ss_pred EECCCcccc
Confidence 776 44433
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=98.59 E-value=3.9e-07 Score=70.33 Aligned_cols=124 Identities=18% Similarity=0.145 Sum_probs=84.4
Q ss_pred chhHhHHHHHHHHHHHhc------------CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA------------KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAV 69 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~------------~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~ 69 (239)
+++|+.++.++++++... +-.++|++||. +.+... .+...|+.+|..
T Consensus 111 ~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~asKaa 169 (257)
T 3tl3_A 111 VDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASV-AAFDGQ--------------------IGQAAYSASKGG 169 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCC-C--CCH--------------------HHHHHHHHHHHH
T ss_pred HHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcch-hhcCCC--------------------CCCccHHHHHHH
Confidence 678999999999998753 23589999996 433110 124679999999
Q ss_pred HHHHHHHHHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCC
Q 026418 70 AEKAAWEEAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSA 146 (239)
Q Consensus 70 ~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~ 146 (239)
.+.+.+.++.+ .|+++..++||.+..+..... .......+....+. ...+.+.+|+|+++++++..+..
T Consensus 170 ~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~~~-----~~r~~~p~dva~~v~~l~s~~~i 241 (257)
T 3tl3_A 170 VVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASL---PEEARASLGKQVPH-----PSRLGNPDEYGALAVHIIENPML 241 (257)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC------CHHHHHHHHHTSSS-----SCSCBCHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHhcccCcEEEEEEecCccChhhhhc---cHHHHHHHHhcCCC-----CCCccCHHHHHHHHHHHhcCCCC
Confidence 99998888765 489999999999987643221 11222222222221 13478899999999999987555
Q ss_pred Cc-eEEEec
Q 026418 147 SG-RYLCAE 154 (239)
Q Consensus 147 ~~-~y~~~~ 154 (239)
.| ++++.|
T Consensus 242 tG~~i~vdG 250 (257)
T 3tl3_A 242 NGEVIRLDG 250 (257)
T ss_dssp CSCEEEEST
T ss_pred CCCEEEECC
Confidence 56 666653
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=98.58 E-value=2e-07 Score=72.42 Aligned_cols=123 Identities=11% Similarity=0.108 Sum_probs=80.7
Q ss_pred chhHhHHHHHHHHHH----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++.+++ ++.+..++|++||.++.++. .+...|+.+|...+.+.+.+
T Consensus 129 ~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~---------------------~~~~~Y~asKaa~~~~~~~l 187 (266)
T 3grp_A 129 LAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGN---------------------PGQTNYCAAKAGLIGFSKAL 187 (266)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC----------------------------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCC---------------------CCchhHHHHHHHHHHHHHHH
Confidence 578999966666655 44566799999996443321 12467999999999998888
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-eEE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL 151 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~ 151 (239)
+.+ .|+++..++|+.+.++..... .......+....+ ...+.+.+|+|+++++++.... ..| +++
T Consensus 188 a~e~~~~gI~vn~v~PG~v~t~~~~~~---~~~~~~~~~~~~p------~~r~~~~edvA~~v~~L~s~~~~~itG~~i~ 258 (266)
T 3grp_A 188 AQEIASRNITVNCIAPGFIKSAMTDKL---NEKQKEAIMAMIP------MKRMGIGEEIAFATVYLASDEAAYLTGQTLH 258 (266)
T ss_dssp HHHHGGGTEEEEEEEECSBCSHHHHTC---CHHHHHHHHTTCT------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHhhhhCcEEEEEeeCcCCCchhhcc---CHHHHHHHHhcCC------CCCCcCHHHHHHHHHHHhCccccCccCCEEE
Confidence 765 489999999999987532211 1122233333322 2457789999999999886432 234 666
Q ss_pred Eec
Q 026418 152 CAE 154 (239)
Q Consensus 152 ~~~ 154 (239)
+.|
T Consensus 259 vdG 261 (266)
T 3grp_A 259 ING 261 (266)
T ss_dssp EST
T ss_pred ECC
Confidence 664
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.58 E-value=8.8e-07 Score=68.82 Aligned_cols=126 Identities=13% Similarity=0.081 Sum_probs=82.6
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.|+.++++++. +.+..++|++||. ++. .. + ..+...|+.+|...+.+.+.+
T Consensus 127 ~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~-~~~-~~------~------------~~~~~~Y~asK~a~~~~~~~l 186 (267)
T 1vl8_A 127 IEVNLFGTYYVCREAFSLLRESDNPSIINIGSL-TVE-EV------T------------MPNISAYAASKGGVASLTKAL 186 (267)
T ss_dssp HHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCG-GGT-CC------C------------SSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCc-chh-cc------C------------CCCChhHHHHHHHHHHHHHHH
Confidence 5789999999988874 3456899999996 421 00 0 013567999999999999888
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eEE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYL 151 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y~ 151 (239)
+.+ .|+++.+++|+.+..+..... .........+....+ ...+.+.+|+|+++++++... ...| ++.
T Consensus 187 a~e~~~~gi~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~p------~~~~~~p~dvA~~v~~l~s~~~~~itG~~i~ 259 (267)
T 1vl8_A 187 AKEWGRYGIRVNVIAPGWYRTKMTEAV-FSDPEKLDYMLKRIP------LGRTGVPEDLKGVAVFLASEEAKYVTGQIIF 259 (267)
T ss_dssp HHHHGGGTCEEEEEEECCBCSTTTHHH-HTCHHHHHHHHHTCT------TSSCBCGGGGHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHhcccCeEEEEEEeccCcccccccc-ccChHHHHHHHhhCC------CCCCcCHHHHHHHHHHHcCccccCCcCCeEE
Confidence 765 489999999999977632100 000111222222221 134788999999999988643 2234 555
Q ss_pred Eec
Q 026418 152 CAE 154 (239)
Q Consensus 152 ~~~ 154 (239)
+.|
T Consensus 260 vdG 262 (267)
T 1vl8_A 260 VDG 262 (267)
T ss_dssp EST
T ss_pred ECC
Confidence 553
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=98.58 E-value=4.6e-07 Score=70.48 Aligned_cols=127 Identities=13% Similarity=0.083 Sum_probs=85.1
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++.. .+..++|++||. +.+... .....|+.+|...+.+.+.+
T Consensus 109 ~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~asKaa~~~l~~~l 167 (269)
T 3vtz_A 109 IDVNVNGSYLMAKYTIPVMLAIGHGSIINIASV-QSYAAT--------------------KNAAAYVTSKHALLGLTRSV 167 (269)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG-GGTSBC--------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHHcCCCEEEEECch-hhccCC--------------------CCChhHHHHHHHHHHHHHHH
Confidence 57999999999988754 456799999996 544221 12567999999999999998
Q ss_pred HHHc--CccEEEEecCcccCCCCCC--------CCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--C
Q 026418 78 AVAR--GVDLVVVNPVLVLGPLLQS--------TVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--S 145 (239)
Q Consensus 78 ~~~~--~~~~~i~Rp~~v~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~ 145 (239)
+.+. ++++..++||.+.++.... ........+..+.... ....+.+.+|+|+++++++... .
T Consensus 168 a~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------p~~r~~~pedvA~~v~~L~s~~~~~ 241 (269)
T 3vtz_A 168 AIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQH------PMGRIGRPEEVAEVVAFLASDRSSF 241 (269)
T ss_dssp HHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHS------TTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcC------CCCCCcCHHHHHHHHHHHhCCccCC
Confidence 8776 7899999999998753100 0000011111111111 1245788999999999988643 2
Q ss_pred CCc-eEEEecC
Q 026418 146 ASG-RYLCAES 155 (239)
Q Consensus 146 ~~~-~y~~~~~ 155 (239)
..| ++++.|.
T Consensus 242 itG~~i~vdGG 252 (269)
T 3vtz_A 242 ITGACLTVDGG 252 (269)
T ss_dssp CCSCEEEESTT
T ss_pred CcCcEEEECCC
Confidence 234 6777643
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=98.58 E-value=2.9e-07 Score=72.18 Aligned_cols=127 Identities=17% Similarity=0.058 Sum_probs=84.2
Q ss_pred chhHhHHHHHHHHHHHhc--CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~--~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++.++++++.+. +..++|++||.++..+.. .+...|+.+|...+.+.+.++.
T Consensus 135 ~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~--------------------~~~~~Y~asK~a~~~~~~~la~ 194 (283)
T 1g0o_A 135 FTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAV--------------------PKHAVYSGSKGAIETFARCMAI 194 (283)
T ss_dssp HHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSC--------------------SSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCCC--------------------CCCcchHHHHHHHHHHHHHHHH
Confidence 679999999999999886 567999999963322110 1256799999999999988876
Q ss_pred H---cCccEEEEecCcccCCCCCC-------CC-ChhHHHHHHHHc--CCCCccCCCCCCceehHHHHHHHHHhhcCCC-
Q 026418 80 A---RGVDLVVVNPVLVLGPLLQS-------TV-NASIIHILKYLN--GSAKTYANSVQAYVHVRDVALAHILVYETPS- 145 (239)
Q Consensus 80 ~---~~~~~~i~Rp~~v~G~~~~~-------~~-~~~~~~~~~~~~--~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~- 145 (239)
+ .|+++.+++|+.+.++.... .. .........+.. ..+ ...+.+.+|+|+++++++....
T Consensus 195 e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p------~~r~~~p~dvA~~v~~l~s~~~~ 268 (283)
T 1g0o_A 195 DMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSP------LRRVGLPIDIARVVCFLASNDGG 268 (283)
T ss_dssp HHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCT------TCSCBCHHHHHHHHHHHHSGGGT
T ss_pred HhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCC------CCCCcCHHHHHHHHHHHhCcccc
Confidence 5 48999999999998752110 00 000111122222 111 2347889999999999986432
Q ss_pred -CCc-eEEEec
Q 026418 146 -ASG-RYLCAE 154 (239)
Q Consensus 146 -~~~-~y~~~~ 154 (239)
..| ++++.|
T Consensus 269 ~itG~~i~vdg 279 (283)
T 1g0o_A 269 WVTGKVIGIDG 279 (283)
T ss_dssp TCCSCEEEEST
T ss_pred CcCCCEEEeCC
Confidence 334 555553
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=98.57 E-value=4.3e-07 Score=70.48 Aligned_cols=126 Identities=14% Similarity=0.105 Sum_probs=82.6
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++.+ .+..++|++||. +.+... .+...|+.+|...+.+.+.+
T Consensus 102 ~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~~sK~a~~~~~~~l 160 (264)
T 2dtx_A 102 IDVNLFGYYYASKFAIPYMIRSRDPSIVNISSV-QASIIT--------------------KNASAYVTSKHAVIGLTKSI 160 (264)
T ss_dssp HHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCG-GGTSCC--------------------TTBHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCc-hhccCC--------------------CCchhHHHHHHHHHHHHHHH
Confidence 57899999999888864 346799999996 544211 13567999999999999998
Q ss_pred HHHcC--ccEEEEecCcccCCCCCCCCC----hhH----HHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--C
Q 026418 78 AVARG--VDLVVVNPVLVLGPLLQSTVN----ASI----IHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--S 145 (239)
Q Consensus 78 ~~~~~--~~~~i~Rp~~v~G~~~~~~~~----~~~----~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~ 145 (239)
+.+.+ +++.+++|+.+.++....... ... .....+.... ....+++.+|+|+++++++... .
T Consensus 161 a~e~~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------p~~~~~~p~dvA~~v~~l~s~~~~~ 234 (264)
T 2dtx_A 161 ALDYAPLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEH------PMQRIGKPQEVASAVAFLASREASF 234 (264)
T ss_dssp HHHHTTTSEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHS------TTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HHHhcCCcEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcC------CCCCCcCHHHHHHHHHHHhCchhcC
Confidence 87654 899999999997652100000 000 0111111111 1235889999999999988643 2
Q ss_pred CCc-eEEEec
Q 026418 146 ASG-RYLCAE 154 (239)
Q Consensus 146 ~~~-~y~~~~ 154 (239)
..| ++++.|
T Consensus 235 ~tG~~i~vdG 244 (264)
T 2dtx_A 235 ITGTCLYVDG 244 (264)
T ss_dssp CCSCEEEEST
T ss_pred CCCcEEEECC
Confidence 234 666654
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=98.57 E-value=4.3e-07 Score=70.06 Aligned_cols=131 Identities=16% Similarity=0.026 Sum_probs=87.2
Q ss_pred chhHhHHHHHHHHHHHhcC--CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~--v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++.++++++...- -.++|++||. +.+... .+...|+.+|...+.+.+.++.
T Consensus 110 ~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~asKaa~~~~~~~la~ 168 (255)
T 4eso_A 110 FAVNTKGAFFTVQRLTPLIREGGSIVFTSSV-ADEGGH--------------------PGMSVYSASKAALVSFASVLAA 168 (255)
T ss_dssp HHHHTHHHHHHHHHHGGGEEEEEEEEEECCG-GGSSBC--------------------TTBHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHhcCCEEEEECCh-hhcCCC--------------------CCchHHHHHHHHHHHHHHHHHH
Confidence 6799999999999997642 2589999996 433211 1357799999999999998887
Q ss_pred Hc---CccEEEEecCcccCCCCCCCC-Ch-hHHHHHH-HHcCCCCccCCCCCCceehHHHHHHHHHhhcCC-CCCc-eEE
Q 026418 80 AR---GVDLVVVNPVLVLGPLLQSTV-NA-SIIHILK-YLNGSAKTYANSVQAYVHVRDVALAHILVYETP-SASG-RYL 151 (239)
Q Consensus 80 ~~---~~~~~i~Rp~~v~G~~~~~~~-~~-~~~~~~~-~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~-~~~~-~y~ 151 (239)
+. |+++..++|+.+..+...... .. ....+.. .....+ ...+.+.+|+|+++++++... ...| +++
T Consensus 169 e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p------~~r~~~pedvA~~v~~L~s~~~~itG~~i~ 242 (255)
T 4eso_A 169 ELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITP------MKRNGTADEVARAVLFLAFEATFTTGAKLA 242 (255)
T ss_dssp HTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHST------TSSCBCHHHHHHHHHHHHHTCTTCCSCEEE
T ss_pred HHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCC------CCCCcCHHHHHHHHHHHcCcCcCccCCEEE
Confidence 64 899999999999887533211 11 0111111 111111 234678999999999988642 2234 666
Q ss_pred Ee-cCCCCH
Q 026418 152 CA-ESVLHR 159 (239)
Q Consensus 152 ~~-~~~~s~ 159 (239)
+. |...++
T Consensus 243 vdGG~~~~l 251 (255)
T 4eso_A 243 VDGGLGQKL 251 (255)
T ss_dssp ESTTTTTTB
T ss_pred ECCCccccC
Confidence 66 444443
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.57 E-value=4.2e-07 Score=70.01 Aligned_cols=128 Identities=12% Similarity=0.089 Sum_probs=80.1
Q ss_pred chhHhHHHHHHHHH----HHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVA----AAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a----~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..+.++ +++.+ .++|++||. +.+... .+...|+.+|...+.+.+.+
T Consensus 108 ~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~-~~~~~~--------------------~~~~~Y~~sK~a~~~~~~~l 165 (253)
T 1hxh_A 108 LKINTESVFIGCQQGIAAMKETG-GSIINMASV-SSWLPI--------------------EQYAGYSASKAAVSALTRAA 165 (253)
T ss_dssp HHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCG-GGTSCC--------------------TTBHHHHHHHHHHHHHHHHH
T ss_pred HHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcch-hhcCCC--------------------CCCccHHHHHHHHHHHHHHH
Confidence 57888877666654 44556 899999996 544211 12567999999999999888
Q ss_pred HHH---c--CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-e
Q 026418 78 AVA---R--GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-R 149 (239)
Q Consensus 78 ~~~---~--~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~ 149 (239)
+.+ . |+++.++||+.++++....... .......+.......+ ...+.+.+|+|+++++++.... ..| +
T Consensus 166 a~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~p--~~~~~~~~dvA~~~~~l~s~~~~~~tG~~ 241 (253)
T 1hxh_A 166 ALSCRKQGYAIRVNSIHPDGIYTPMMQASLP--KGVSKEMVLHDPKLNR--AGRAYMPERIAQLVLFLASDESSVMSGSE 241 (253)
T ss_dssp HHHHHHHTCCEEEEEEEESEECCHHHHHHSC--TTCCHHHHBCBTTTBT--TCCEECHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred HHHhhhcCCCeEEEEEEeCCccCchhhhccc--hhhhHHHHhhhhccCc--cCCCCCHHHHHHHHHHHcCccccCCCCcE
Confidence 765 3 8999999999998863110000 0000110111000011 1347899999999999886532 234 6
Q ss_pred EEEecC
Q 026418 150 YLCAES 155 (239)
Q Consensus 150 y~~~~~ 155 (239)
+++.|.
T Consensus 242 ~~vdgG 247 (253)
T 1hxh_A 242 LHADNS 247 (253)
T ss_dssp EEESSS
T ss_pred EEECCC
Confidence 666543
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.57 E-value=5.5e-07 Score=71.00 Aligned_cols=125 Identities=15% Similarity=0.044 Sum_probs=84.0
Q ss_pred chhHhHHHHHHHHHHHhcCC--CEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKV--RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v--~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++.++++++...-. .++|++||. +.+... .....|+.+|...+.+.+.++.
T Consensus 157 ~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~-~~~~~~--------------------~~~~~Y~asKaa~~~l~~~la~ 215 (294)
T 3r3s_A 157 FAVNVFALFWITQEAIPLLPKGASIITTSSI-QAYQPS--------------------PHLLDYAATKAAILNYSRGLAK 215 (294)
T ss_dssp HHHHTHHHHHHHHHHGGGCCTTCEEEEECCG-GGTSCC--------------------TTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHhhcCCEEEEECCh-hhccCC--------------------CCchHHHHHHHHHHHHHHHHHH
Confidence 67999999999999987643 389999996 544221 1256799999999999998877
Q ss_pred Hc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-eEEEe
Q 026418 80 AR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYLCA 153 (239)
Q Consensus 80 ~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~ 153 (239)
+. |+++..++|+.+.++........ ...+..+.. ......+...+|+|+++++++.... ..| ++++.
T Consensus 216 e~~~~gI~vn~v~PG~v~t~~~~~~~~~-~~~~~~~~~------~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vd 288 (294)
T 3r3s_A 216 QVAEKGIRVNIVAPGPIWTALQISGGQT-QDKIPQFGQ------QTPMKRAGQPAELAPVYVYLASQESSYVTAEVHGVC 288 (294)
T ss_dssp HHGGGTCEEEEEEECSBCSHHHHTTTSC-GGGSTTTTT------TSTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEES
T ss_pred HHhhcCeEEEEEecCcCccccccccCCC-HHHHHHHHh------cCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEEC
Confidence 64 89999999999987531000000 000000000 1112347889999999999886432 234 77766
Q ss_pred c
Q 026418 154 E 154 (239)
Q Consensus 154 ~ 154 (239)
|
T Consensus 289 G 289 (294)
T 3r3s_A 289 G 289 (294)
T ss_dssp T
T ss_pred C
Confidence 3
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=98.57 E-value=6.5e-07 Score=69.83 Aligned_cols=125 Identities=14% Similarity=0.020 Sum_probs=84.4
Q ss_pred chhHhHHHHHHHHHHHhcC--CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~--v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++.++++++...- -.++|++||.++.++. .+...|+.+|...+.+.+.++.
T Consensus 116 ~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asK~a~~~~~~~la~ 174 (275)
T 2pd4_A 116 MEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYM---------------------AHYNVMGLAKAALESAVRYLAV 174 (275)
T ss_dssp HHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC---------------------TTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCC---------------------CCchhhHHHHHHHHHHHHHHHH
Confidence 5789999999999998751 1589999996332211 1246799999999999998877
Q ss_pred Hc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eEEEe
Q 026418 80 AR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYLCA 153 (239)
Q Consensus 80 ~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y~~~ 153 (239)
+. |+++..++||.+.++..... .........+....+ ...+.+.+|+|+++++++... ...| .+++.
T Consensus 175 e~~~~gi~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~p------~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vd 247 (275)
T 2pd4_A 175 DLGKHHIRVNALSAGPIRTLASSGI-ADFRMILKWNEINAP------LRKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVD 247 (275)
T ss_dssp HHHTTTCEEEEEEECCCCCTTGGGS-TTHHHHHHHHHHHST------TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred HhhhcCeEEEEEeeCccccchhhhc-cccHHHHHHHHhcCC------cCCCCCHHHHHHHHHHHhCccccCCCCCEEEEC
Confidence 64 89999999999988743211 111122222222221 123668999999999988642 2234 55665
Q ss_pred c
Q 026418 154 E 154 (239)
Q Consensus 154 ~ 154 (239)
|
T Consensus 248 g 248 (275)
T 2pd4_A 248 A 248 (275)
T ss_dssp T
T ss_pred C
Confidence 4
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.57 E-value=1.5e-07 Score=72.98 Aligned_cols=125 Identities=20% Similarity=0.153 Sum_probs=83.4
Q ss_pred chhHhHHHHHHHHHHHhc----CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++... + .++|++||. ..+... .+...|+.+|...+.+.+.+
T Consensus 117 ~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~-~~~~~~--------------------~~~~~Y~asKaa~~~~~~~l 174 (264)
T 3ucx_A 117 IELTVFGALRLIQGFTPALEESK-GAVVNVNSM-VVRHSQ--------------------AKYGAYKMAKSALLAMSQTL 174 (264)
T ss_dssp HHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCG-GGGCCC--------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcc-hhccCC--------------------CccHHHHHHHHHHHHHHHHH
Confidence 678999999999887532 3 699999996 433111 12567999999999999988
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCC--------hhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVN--------ASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP-- 144 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~-- 144 (239)
+.+ .|+++..++|+.++++....... ........+..+. ....+.+.+|+|+++++++...
T Consensus 175 a~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------p~~r~~~p~dvA~~v~~L~s~~~~ 248 (264)
T 3ucx_A 175 ATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGS------DLKRLPTEDEVASAILFMASDLAS 248 (264)
T ss_dssp HHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTS------SSSSCCBHHHHHHHHHHHHSGGGT
T ss_pred HHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccC------CcccCCCHHHHHHHHHHHcCcccc
Confidence 776 58999999999998763210000 0001111222222 1345889999999999988643
Q ss_pred CCCc-eEEEec
Q 026418 145 SASG-RYLCAE 154 (239)
Q Consensus 145 ~~~~-~y~~~~ 154 (239)
...| ++++.|
T Consensus 249 ~itG~~i~vdG 259 (264)
T 3ucx_A 249 GITGQALDVNC 259 (264)
T ss_dssp TCCSCEEEEST
T ss_pred CCCCCEEEECC
Confidence 2334 666664
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.57 E-value=5e-07 Score=70.14 Aligned_cols=126 Identities=13% Similarity=0.106 Sum_probs=80.3
Q ss_pred chhHhHHHHHHHHHH----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..+.+++ ++.+..++|++||. +.+... .+...|+.+|...+.+.+.+
T Consensus 121 ~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~asK~a~~~~~~~l 179 (267)
T 1iy8_A 121 VSINLRGVFLGLEKVLKIMREQGSGMVVNTASV-GGIRGI--------------------GNQSGYAAAKHGVVGLTRNS 179 (267)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCG-GGTSBC--------------------SSBHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcch-hhccCC--------------------CCCccHHHHHHHHHHHHHHH
Confidence 578998887666554 45567899999996 433110 13567999999999999888
Q ss_pred HHH---cCccEEEEecCcccCCCCCC-----CCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQS-----TVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SAS 147 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~ 147 (239)
+.+ .|+++..++|+.+.++.... ...........+....+ ...+.+.+|+|+++++++... ...
T Consensus 180 a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p------~~r~~~~~dvA~~v~~l~s~~~~~~t 253 (267)
T 1iy8_A 180 AVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNP------SKRYGEAPEIAAVVAFLLSDDASYVN 253 (267)
T ss_dssp HHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCT------TCSCBCHHHHHHHHHHHTSGGGTTCC
T ss_pred HHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCC------CCCCcCHHHHHHHHHHHcCccccCCC
Confidence 765 48999999999998753110 00000000011221111 234789999999999988643 233
Q ss_pred c-eEEEec
Q 026418 148 G-RYLCAE 154 (239)
Q Consensus 148 ~-~y~~~~ 154 (239)
| ++++.|
T Consensus 254 G~~i~vdG 261 (267)
T 1iy8_A 254 ATVVPIDG 261 (267)
T ss_dssp SCEEEEST
T ss_pred CCEEEECC
Confidence 4 666653
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=98.57 E-value=3.7e-07 Score=71.87 Aligned_cols=124 Identities=16% Similarity=0.105 Sum_probs=84.9
Q ss_pred chhHhHHHHHHHHHHHhcC--CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~--v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++.++++++...- -.++|++||. ..+... .....|+.+|...+.+.+.++.
T Consensus 154 ~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~asKaa~~~l~~~la~ 212 (291)
T 3ijr_A 154 FRINIFSYFHVTKAALSHLKQGDVIINTASI-VAYEGN--------------------ETLIDYSATKGAIVAFTRSLSQ 212 (291)
T ss_dssp HHHHTHHHHHHHHHHHTTCCTTCEEEEECCT-HHHHCC--------------------TTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHhhCCEEEEEech-HhcCCC--------------------CCChhHHHHHHHHHHHHHHHHH
Confidence 6799999999999998752 3589999996 444211 1246799999999999998877
Q ss_pred Hc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eEEEe
Q 026418 80 AR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYLCA 153 (239)
Q Consensus 80 ~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y~~~ 153 (239)
+. |+++..++|+.+.++...... .......+..+. ....+.+.+|+|+++++++... ...| ++++.
T Consensus 213 e~~~~gi~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~------p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vd 284 (291)
T 3ijr_A 213 SLVQKGIRVNGVAPGPIWTPLIPSSF--DEKKVSQFGSNV------PMQRPGQPYELAPAYVYLASSDSSYVTGQMIHVN 284 (291)
T ss_dssp HHGGGTCEEEEEEECSBCSTHHHHHS--CHHHHHHTTTTS------TTSSCBCGGGTHHHHHHHHSGGGTTCCSCEEEES
T ss_pred HHhhcCEEEEEEeeCCCcCCcccccC--CHHHHHHHHccC------CCCCCcCHHHHHHHHHHHhCCccCCCcCCEEEEC
Confidence 64 899999999999876311000 011111111111 1345788999999999988643 2334 66665
Q ss_pred c
Q 026418 154 E 154 (239)
Q Consensus 154 ~ 154 (239)
|
T Consensus 285 G 285 (291)
T 3ijr_A 285 G 285 (291)
T ss_dssp S
T ss_pred C
Confidence 4
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.56 E-value=3.7e-07 Score=71.48 Aligned_cols=124 Identities=17% Similarity=0.107 Sum_probs=77.1
Q ss_pred chhHhHHHHHHHHHHHhc----C---CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----K---VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAA 74 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----~---v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~ 74 (239)
+++|+.++.++++++... + ..++|++||.++.++. .+...|+.+|...+.+.
T Consensus 137 ~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~---------------------~~~~~Y~asKaa~~~l~ 195 (280)
T 4da9_A 137 VGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTS---------------------PERLDYCMSKAGLAAFS 195 (280)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC----------------------------CCHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCC---------------------CCccHHHHHHHHHHHHH
Confidence 678999999999887653 2 3589999996443321 12467999999999999
Q ss_pred HHHHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-
Q 026418 75 WEEAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG- 148 (239)
Q Consensus 75 ~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~- 148 (239)
+.++.+ .|+++..++||.+..+...... .........+. .....+...+|+|+++++++.... ..|
T Consensus 196 ~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~---~~~~~~~~~~~-----~p~~r~~~pedvA~~v~~L~s~~~~~itG~ 267 (280)
T 4da9_A 196 QGLALRLAETGIAVFEVRPGIIRSDMTAAVS---GKYDGLIESGL-----VPMRRWGEPEDIGNIVAGLAGGQFGFATGS 267 (280)
T ss_dssp HHHHHHHTTTTEEEEEEEECCBCC------------------------------CCBCHHHHHHHHHHHHTSTTGGGTTC
T ss_pred HHHHHHHHHhCcEEEEEeecCCcCCchhhcc---hhHHHHHhhcC-----CCcCCcCCHHHHHHHHHHHhCccccCCCCC
Confidence 988876 5899999999999876432110 00111111101 112347789999999999887543 234
Q ss_pred eEEEec
Q 026418 149 RYLCAE 154 (239)
Q Consensus 149 ~y~~~~ 154 (239)
++++.|
T Consensus 268 ~i~vdG 273 (280)
T 4da9_A 268 VIQADG 273 (280)
T ss_dssp EEEEST
T ss_pred EEEECC
Confidence 666664
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.56 E-value=4.2e-07 Score=70.05 Aligned_cols=125 Identities=16% Similarity=0.050 Sum_probs=82.2
Q ss_pred chhHhHHHHHHHHHH----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++ ++.+ .++|++||. +.+... .+...|+.+|...+.+.+.+
T Consensus 107 ~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~-~~~~~~--------------------~~~~~Y~asK~a~~~~~~~l 164 (254)
T 3kzv_A 107 YDINFFSIVSLVGIALPELKKTN-GNVVFVSSD-ACNMYF--------------------SSWGAYGSSKAALNHFAMTL 164 (254)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCS-CCCCSS--------------------CCSHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCc-hhccCC--------------------CCcchHHHHHHHHHHHHHHH
Confidence 678999999999998 5555 799999996 433111 23568999999999999999
Q ss_pred HHHc-CccEEEEecCcccCCCCCCCCC------hhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC---CC
Q 026418 78 AVAR-GVDLVVVNPVLVLGPLLQSTVN------ASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS---AS 147 (239)
Q Consensus 78 ~~~~-~~~~~i~Rp~~v~G~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~ 147 (239)
+.+. ++++..++||.+..+....... ........+....+ ...+.+.+|+|+++++++.... ..
T Consensus 165 a~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~r~~~p~dva~~v~~L~s~~~~~~it 238 (254)
T 3kzv_A 165 ANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKE------NNQLLDSSVPATVYAKLALHGIPDGVN 238 (254)
T ss_dssp HHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHT------TC----CHHHHHHHHHHHHHCCCGGGT
T ss_pred HhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHh------cCCcCCcccHHHHHHHHHhhcccCCCC
Confidence 8775 8999999999998875432110 01122222222111 2347789999999999886442 23
Q ss_pred c-eEEEec
Q 026418 148 G-RYLCAE 154 (239)
Q Consensus 148 ~-~y~~~~ 154 (239)
| .+++.|
T Consensus 239 G~~i~vdg 246 (254)
T 3kzv_A 239 GQYLSYND 246 (254)
T ss_dssp TCEEETTC
T ss_pred ccEEEecC
Confidence 4 555554
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=98.56 E-value=8.5e-07 Score=69.28 Aligned_cols=121 Identities=14% Similarity=0.044 Sum_probs=81.7
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++.. .+..++|++||.++..+. .+...|+.+|...+.+.+.+
T Consensus 131 ~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~---------------------~~~~~Y~asKaa~~~l~~~l 189 (277)
T 3gvc_A 131 IAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAV---------------------GGTGAYGMSKAGIIQLSRIT 189 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC---------------------TTBHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC---------------------CCchhHHHHHHHHHHHHHHH
Confidence 67899999999988754 445789999996333211 23567999999999999888
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCC---Cc-c-----CCCCCCceehHHHHHHHHHhhcCC-
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSA---KT-Y-----ANSVQAYVHVRDVALAHILVYETP- 144 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~---~~-~-----~~~~~~~i~v~D~a~~~~~~~~~~- 144 (239)
+.+ .|+++..++|+.+.++.. ........ .. . ......+.+.+|+|+++++++...
T Consensus 190 a~e~~~~gI~vn~v~PG~v~t~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~a 258 (277)
T 3gvc_A 190 AAELRSSGIRSNTLLPAFVDTPMQ-----------QTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSDDA 258 (277)
T ss_dssp HHHHGGGTEEEEEEEECSBCCHHH-----------HHHHTCC------CCHHHHHHHHHSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHhcccCeEEEEEeeCCccCchH-----------HHhhhcchhhHHHHhhhhhhhccccCCCCHHHHHHHHHHHcCCcc
Confidence 765 589999999999987521 11111000 00 0 001134778999999999988643
Q ss_pred -CCCc-eEEEec
Q 026418 145 -SASG-RYLCAE 154 (239)
Q Consensus 145 -~~~~-~y~~~~ 154 (239)
...| ++++.|
T Consensus 259 ~~itG~~i~vdG 270 (277)
T 3gvc_A 259 SMITGTTQIADG 270 (277)
T ss_dssp TTCCSCEEEEST
T ss_pred CCccCcEEEECC
Confidence 2334 666664
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.56 E-value=2.5e-07 Score=70.88 Aligned_cols=126 Identities=13% Similarity=0.070 Sum_probs=83.3
Q ss_pred chhHhHHHHHHHHHHHhcCC--CEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKV--RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v--~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++.++++++...-. .++|++||. ..+... .+...|+.+|...+.+.+.++.
T Consensus 98 ~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~-~~~~~~--------------------~~~~~Y~asKaa~~~~~~~la~ 156 (244)
T 4e4y_A 98 LDLNVWSSIYFIKGLENNLKVGASIVFNGSD-QCFIAK--------------------PNSFAYTLSKGAIAQMTKSLAL 156 (244)
T ss_dssp HHHHTHHHHHHHHHTGGGEEEEEEEEEECCG-GGTCCC--------------------TTBHHHHHHHHHHHHHHHHHHH
T ss_pred HHHccHHHHHHHHHHHHHhccCcEEEEECCH-HHccCC--------------------CCCchhHHHHHHHHHHHHHHHH
Confidence 68999999999999977532 489999996 443211 1246799999999999998876
Q ss_pred ---HcCccEEEEecCcccCCCCCCCCCh--------hHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--C
Q 026418 80 ---ARGVDLVVVNPVLVLGPLLQSTVNA--------SIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--A 146 (239)
Q Consensus 80 ---~~~~~~~i~Rp~~v~G~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~ 146 (239)
..|+++..++||.+..+........ ............ ....+.+.+|+|+++++++.... .
T Consensus 157 e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------p~~r~~~p~dvA~~v~~l~s~~~~~i 230 (244)
T 4e4y_A 157 DLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEF------PLNRIAQPQEIAELVIFLLSDKSKFM 230 (244)
T ss_dssp HHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTS------TTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcC------CCCCCcCHHHHHHHHHHHhcCccccc
Confidence 3589999999999976531100000 000111111111 12457889999999999986432 2
Q ss_pred Cc-eEEEec
Q 026418 147 SG-RYLCAE 154 (239)
Q Consensus 147 ~~-~y~~~~ 154 (239)
.| ++++.|
T Consensus 231 tG~~i~vdG 239 (244)
T 4e4y_A 231 TGGLIPIDG 239 (244)
T ss_dssp CSCEEEEST
T ss_pred cCCeEeECC
Confidence 34 666653
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.56 E-value=1.4e-06 Score=67.78 Aligned_cols=123 Identities=14% Similarity=0.007 Sum_probs=84.7
Q ss_pred chhHhHHHHHHHHHHHhc--CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~--~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++.++++++.+. .-.++|++||..+..+.. .+...|+.+|...+.+.+.++.
T Consensus 137 ~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~~--------------------~~~~~Y~asKaa~~~l~~~la~ 196 (271)
T 3v2g_A 137 MAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVPW--------------------PGISLYSASKAALAGLTKGLAR 196 (271)
T ss_dssp HHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCCS--------------------TTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCCC--------------------CCchHHHHHHHHHHHHHHHHHH
Confidence 678999999999999875 246899999952322110 2357799999999999988877
Q ss_pred Hc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eEEEe
Q 026418 80 AR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYLCA 153 (239)
Q Consensus 80 ~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y~~~ 153 (239)
+. |+++..++|+.+..+........ ........+ ...+...+|+|+++++++... ...| ++++.
T Consensus 197 e~~~~gIrvn~v~PG~v~T~~~~~~~~~----~~~~~~~~~------~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vd 266 (271)
T 3v2g_A 197 DLGPRGITVNIVHPGSTDTDMNPADGDH----AEAQRERIA------TGSYGEPQDIAGLVAWLAGPQGKFVTGASLTID 266 (271)
T ss_dssp HHGGGTCEEEEEEECSBCSSSSCSSCSS----HHHHHHTCT------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred HhhhhCeEEEEEecCCCcCCcccccchh----HHHHHhcCC------CCCCCCHHHHHHHHHHHhCcccCCccCCEEEeC
Confidence 64 89999999999988754322111 122222221 134678999999999988532 2334 66665
Q ss_pred c
Q 026418 154 E 154 (239)
Q Consensus 154 ~ 154 (239)
|
T Consensus 267 G 267 (271)
T 3v2g_A 267 G 267 (271)
T ss_dssp T
T ss_pred c
Confidence 4
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=98.56 E-value=1.4e-06 Score=67.06 Aligned_cols=125 Identities=16% Similarity=0.076 Sum_probs=85.1
Q ss_pred chhHhHHHHHHHHHHHhc--CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~--~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++.++++++... +..++|++||. +.+... .....|+.+|...+.+.+.++.
T Consensus 119 ~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~-~~~~~~--------------------~~~~~Y~asKaa~~~~~~~la~ 177 (255)
T 3icc_A 119 VSVNAKAPFFIIQQALSRLRDNSRIINISSA-ATRISL--------------------PDFIAYSMTKGAINTMTFTLAK 177 (255)
T ss_dssp HHHHTHHHHHHHHHHTTTEEEEEEEEEECCG-GGTSCC--------------------TTBHHHHHHHHHHHHHHHHHHH
T ss_pred HhhhchHHHHHHHHHHHhhCCCCEEEEeCCh-hhccCC--------------------CCcchhHHhHHHHHHHHHHHHH
Confidence 579999999999999775 23589999996 433211 1246799999999999988877
Q ss_pred H---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eEEEe
Q 026418 80 A---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYLCA 153 (239)
Q Consensus 80 ~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y~~~ 153 (239)
+ .|+++..++|+.+..+........ ...........+ ...+.+.+|+|+++++++... ...| ++++.
T Consensus 178 e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~------~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vd 250 (255)
T 3icc_A 178 QLGARGITVNAILPGFVKTDMNAELLSD-PMMKQYATTISA------FNRLGEVEDIADTAAFLASPDSRWVTGQLIDVS 250 (255)
T ss_dssp HHGGGTCEEEEEEECCBCCSSSTTTTTS-HHHHHHHHHTST------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred HHHhcCeEEEEEEEeeecccchhhhccc-HHHHHhhhccCC------cCCCCCHHHHHHHHHHHhCcccCCccCCEEEec
Confidence 6 489999999999987654322111 111111212211 245778999999999988543 2334 66666
Q ss_pred c
Q 026418 154 E 154 (239)
Q Consensus 154 ~ 154 (239)
|
T Consensus 251 g 251 (255)
T 3icc_A 251 G 251 (255)
T ss_dssp S
T ss_pred C
Confidence 4
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=98.55 E-value=7.3e-07 Score=69.39 Aligned_cols=123 Identities=14% Similarity=0.058 Sum_probs=81.7
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++.+ .+..++|++||.++..+. .+...|+.+|...+.+.+.+
T Consensus 135 ~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asK~a~~~~~~~l 193 (271)
T 4iin_A 135 IDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGN---------------------MGQTNYSASKGGMIAMSKSF 193 (271)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCC---------------------CCchHhHHHHHHHHHHHHHH
Confidence 57899999998888744 456799999996443321 13577999999999999988
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-eEE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL 151 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~ 151 (239)
+.+ .++++..++||.+..+..... .......... ......+.+.+|+|+++++++.... ..| +++
T Consensus 194 a~e~~~~gi~v~~v~PG~v~T~~~~~~---~~~~~~~~~~------~~~~~~~~~p~dvA~~i~~l~s~~~~~itG~~i~ 264 (271)
T 4iin_A 194 AYEGALRNIRFNSVTPGFIETDMNANL---KDELKADYVK------NIPLNRLGSAKEVAEAVAFLLSDHSSYITGETLK 264 (271)
T ss_dssp HHHHHTTTEEEEEEEECSBCCC---------------CGG------GCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHHHHhCcEEEEEEeCcccCCchhhh---cHHHHHHHHh------cCCcCCCcCHHHHHHHHHHHhCCCcCCCcCCEEE
Confidence 776 589999999999976532210 0000011111 1122458899999999999886432 334 666
Q ss_pred Eec
Q 026418 152 CAE 154 (239)
Q Consensus 152 ~~~ 154 (239)
+.|
T Consensus 265 vdG 267 (271)
T 4iin_A 265 VNG 267 (271)
T ss_dssp EST
T ss_pred eCC
Confidence 654
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=98.54 E-value=2.4e-06 Score=66.17 Aligned_cols=125 Identities=15% Similarity=0.053 Sum_probs=84.5
Q ss_pred chhHhHHHHHHHHHH----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++ ++.+..++|++||.++.++... .+...|+.+|...+.+.+.+
T Consensus 129 ~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------------~~~~~Y~~sK~a~~~~~~~l 189 (267)
T 3gdg_A 129 VQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFP-------------------QEQTSYNVAKAGCIHMARSL 189 (267)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSS-------------------SCCHHHHHHHHHHHHHHHHH
T ss_pred HHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCC-------------------CCCCcchHHHHHHHHHHHHH
Confidence 678999999999988 4445679999999644332110 13567999999999999999
Q ss_pred HHHcC--ccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-eEEE
Q 026418 78 AVARG--VDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYLC 152 (239)
Q Consensus 78 ~~~~~--~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~ 152 (239)
+.+.+ +++..+.||.+..+..... .......+....+ ...+.+.+|+|+++++++.... ..| ++++
T Consensus 190 a~e~~~~i~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~~------~~r~~~~~dva~~~~~l~s~~~~~itG~~i~v 260 (267)
T 3gdg_A 190 ANEWRDFARVNSISPGYIDTGLSDFV---PKETQQLWHSMIP------MGRDGLAKELKGAYVYFASDASTYTTGADLLI 260 (267)
T ss_dssp HHHTTTTCEEEEEEECCEECSCGGGS---CHHHHHHHHTTST------TSSCEETHHHHHHHHHHHSTTCTTCCSCEEEE
T ss_pred HHHhccCcEEEEEECCccccchhhhC---CHHHHHHHHhcCC------CCCCcCHHHHHhHhheeecCccccccCCEEEE
Confidence 88754 6888899999876532211 1122222222221 2457889999999999886432 234 6666
Q ss_pred ec
Q 026418 153 AE 154 (239)
Q Consensus 153 ~~ 154 (239)
.|
T Consensus 261 dg 262 (267)
T 3gdg_A 261 DG 262 (267)
T ss_dssp ST
T ss_pred CC
Confidence 53
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.54 E-value=5.8e-07 Score=69.95 Aligned_cols=134 Identities=16% Similarity=0.136 Sum_probs=85.5
Q ss_pred chhHhHHHHHHHHHHHhc---CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA---KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA 78 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~---~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~ 78 (239)
+++|+.++.++++++... +..++|++||.++.++.+ ....|+.+|...+.+.+.++
T Consensus 111 ~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~---------------------~~~~Y~asKaa~~~~~~~la 169 (270)
T 1yde_A 111 LELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQA---------------------QAVPYVATKGAVTAMTKALA 169 (270)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCT---------------------TCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCCC---------------------CCcccHHHHHHHHHHHHHHH
Confidence 578999999999998642 247999999975554321 24679999999999999887
Q ss_pred HH---cCccEEEEecCcccCCCCCC---CCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC-CCCc-eE
Q 026418 79 VA---RGVDLVVVNPVLVLGPLLQS---TVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP-SASG-RY 150 (239)
Q Consensus 79 ~~---~~~~~~i~Rp~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~-~~~~-~y 150 (239)
.+ .|+++.+++|+.++++.... ........+.......+ ...+...+|+|+++++++... ...| ++
T Consensus 170 ~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p------~~r~~~p~dva~~v~~L~s~~~~itG~~i 243 (270)
T 1yde_A 170 LDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQP------LGRMGQPAEVGAAAVFLASEANFCTGIEL 243 (270)
T ss_dssp HHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTST------TSSCBCHHHHHHHHHHHHHHCTTCCSCEE
T ss_pred HHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCC------CCCCcCHHHHHHHHHHHcccCCCcCCCEE
Confidence 65 58999999999998863110 00000011111111111 123678999999999888642 2234 66
Q ss_pred EEe-cCCCCHHHH
Q 026418 151 LCA-ESVLHRGEV 162 (239)
Q Consensus 151 ~~~-~~~~s~~el 162 (239)
.+. |..+...+.
T Consensus 244 ~vdGG~~~~~~~~ 256 (270)
T 1yde_A 244 LVTGGAELGYGCK 256 (270)
T ss_dssp EESTTTTSCC---
T ss_pred EECCCeecccCcC
Confidence 665 555554433
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=98.53 E-value=1.4e-06 Score=67.57 Aligned_cols=125 Identities=9% Similarity=-0.005 Sum_probs=86.0
Q ss_pred chhHhHHHHHHHHHHHhcC--CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~--v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++.++++++...- -.++|++||.++.++. .....|+.+|...+.+.+.++.
T Consensus 119 ~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asKaa~~~~~~~la~ 177 (266)
T 3oig_A 119 HNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVM---------------------PNYNVMGVAKASLDASVKYLAA 177 (266)
T ss_dssp HHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCC---------------------TTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccC---------------------CCcchhHHHHHHHHHHHHHHHH
Confidence 5789999999999998753 2589999996333211 1256799999999999988877
Q ss_pred Hc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eEEEe
Q 026418 80 AR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYLCA 153 (239)
Q Consensus 80 ~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y~~~ 153 (239)
+. |+++..++|+.+..+...... ........+....+ ...+.+.+|+|+++++++... ...| ++++.
T Consensus 178 e~~~~gi~v~~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~~------~~~~~~p~dva~~v~~l~s~~~~~~tG~~i~vd 250 (266)
T 3oig_A 178 DLGKENIRVNSISAGPIRTLSAKGIS-DFNSILKDIEERAP------LRRTTTPEEVGDTAAFLFSDMSRGITGENLHVD 250 (266)
T ss_dssp HHGGGTEEEEEEEECCCCSGGGTTCT-THHHHHHHHHHHST------TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred HHhhcCcEEEEEecCccccccccccc-chHHHHHHHHhcCC------CCCCCCHHHHHHHHHHHcCCchhcCcCCEEEEC
Confidence 63 799999999999876433221 11222333333222 134678999999999998743 2334 66665
Q ss_pred c
Q 026418 154 E 154 (239)
Q Consensus 154 ~ 154 (239)
|
T Consensus 251 G 251 (266)
T 3oig_A 251 S 251 (266)
T ss_dssp T
T ss_pred C
Confidence 3
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=98.53 E-value=1.6e-06 Score=68.36 Aligned_cols=125 Identities=13% Similarity=-0.025 Sum_probs=85.6
Q ss_pred chhHhHHHHHHHHHHHhcC--CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~--v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++.++++++...- -.++|++||.++..+. .....|+.+|...+.+.+.++.
T Consensus 140 ~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~---------------------~~~~~Y~asKaal~~l~~~la~ 198 (296)
T 3k31_A 140 MHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVV---------------------PHYNVMGVCKAALEASVKYLAV 198 (296)
T ss_dssp HHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCC---------------------TTTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCC---------------------CCchhhHHHHHHHHHHHHHHHH
Confidence 6789999999999998753 3589999996333211 1256799999999999988877
Q ss_pred Hc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eEEEe
Q 026418 80 AR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYLCA 153 (239)
Q Consensus 80 ~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y~~~ 153 (239)
+. |+++..++||.+..+..... ..............+ ...+...+|+|+++++++... ...| ++++.
T Consensus 199 e~~~~gIrvn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~p------~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vd 271 (296)
T 3k31_A 199 DLGKQQIRVNAISAGPVRTLASSGI-SDFHYILTWNKYNSP------LRRNTTLDDVGGAALYLLSDLGRGTTGETVHVD 271 (296)
T ss_dssp HHHTTTEEEEEEEECCCCCSSCCSC-HHHHHHHHHHHHHST------TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred HHhhcCcEEEEEEECCCcCchhhcc-cchHHHHHHHHhcCC------CCCCCCHHHHHHHHHHHcCCccCCccCCEEEEC
Confidence 64 89999999999988753321 111122222222222 134667899999999998642 2334 66666
Q ss_pred c
Q 026418 154 E 154 (239)
Q Consensus 154 ~ 154 (239)
|
T Consensus 272 G 272 (296)
T 3k31_A 272 C 272 (296)
T ss_dssp T
T ss_pred C
Confidence 3
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=98.53 E-value=4.5e-07 Score=70.02 Aligned_cols=126 Identities=16% Similarity=0.055 Sum_probs=82.0
Q ss_pred chhHhHHHHHHHHHHHhc----CC-CEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----KV-RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----~v-~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++.++++++.+. +. .++|++||. +.+... .+...|+.+|...+.+.+.
T Consensus 109 ~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~~sK~a~~~~~~~ 167 (258)
T 3a28_C 109 YSVNVFSVFFGIQAASRKFDELGVKGKIINAASI-AAIQGF--------------------PILSAYSTTKFAVRGLTQA 167 (258)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCG-GGTSCC--------------------TTCHHHHHHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcc-hhccCC--------------------CCchhHHHHHHHHHHHHHH
Confidence 678999999999988753 55 799999996 433111 1256799999999999988
Q ss_pred HHHH---cCccEEEEecCcccCCCCCCCC--------ChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC-
Q 026418 77 EAVA---RGVDLVVVNPVLVLGPLLQSTV--------NASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP- 144 (239)
Q Consensus 77 ~~~~---~~~~~~i~Rp~~v~G~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~- 144 (239)
++.+ .|+++.+++|+.+..+...... .........+.... ....+.+.+|+|+++++++...
T Consensus 168 la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------p~~r~~~p~dvA~~v~~l~s~~~ 241 (258)
T 3a28_C 168 AAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSI------ALGRPSVPEDVAGLVSFLASENS 241 (258)
T ss_dssp HHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTC------TTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcC------CCCCccCHHHHHHHHHHHhCccc
Confidence 8765 4899999999999764210000 00000111111111 1234789999999999988643
Q ss_pred -CCCc-eEEEec
Q 026418 145 -SASG-RYLCAE 154 (239)
Q Consensus 145 -~~~~-~y~~~~ 154 (239)
...| ++++.|
T Consensus 242 ~~~tG~~i~vdG 253 (258)
T 3a28_C 242 NYVTGQVMLVDG 253 (258)
T ss_dssp TTCCSCEEEESS
T ss_pred CCCCCCEEEECC
Confidence 2334 666653
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.52 E-value=2e-06 Score=65.87 Aligned_cols=122 Identities=16% Similarity=0.114 Sum_probs=83.6
Q ss_pred chhHhHHHHHHHHHHHhc----CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++.+. +..++|++||. +.++. .....|+.+|...+.+.+.+
T Consensus 105 ~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~-~~~~~---------------------~~~~~Y~asK~a~~~~~~~l 162 (245)
T 1uls_A 105 LRVNLTGSFLVAKAASEAMREKNPGSIVLTASR-VYLGN---------------------LGQANYAASMAGVVGLTRTL 162 (245)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCG-GGGCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccc-hhcCC---------------------CCchhHHHHHHHHHHHHHHH
Confidence 578999999999888653 56899999996 44421 12467999999999888887
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eEE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYL 151 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y~ 151 (239)
+.+ .|+++.+++|+.+..+.... . .......+....+ ...+.+.+|+|+++++++... ...| ++.
T Consensus 163 a~e~~~~gi~v~~v~PG~v~t~~~~~-~--~~~~~~~~~~~~p------~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~ 233 (245)
T 1uls_A 163 ALELGRWGIRVNTLAPGFIETRMTAK-V--PEKVREKAIAATP------LGRAGKPLEVAYAALFLLSDESSFITGQVLF 233 (245)
T ss_dssp HHHHGGGTEEEEEEEECSBCCTTTSS-S--CHHHHHHHHHTCT------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHHhHhCeEEEEEEeCcCcCcchhh-c--CHHHHHHHHhhCC------CCCCcCHHHHHHHHHHHhCchhcCCcCCEEE
Confidence 665 48999999999997764321 1 1122222222221 123788999999999988643 2234 566
Q ss_pred Eec
Q 026418 152 CAE 154 (239)
Q Consensus 152 ~~~ 154 (239)
+.|
T Consensus 234 vdg 236 (245)
T 1uls_A 234 VDG 236 (245)
T ss_dssp EST
T ss_pred ECC
Confidence 653
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.52 E-value=4e-07 Score=71.89 Aligned_cols=141 Identities=16% Similarity=0.120 Sum_probs=90.3
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++.+ .+ .++|++||. +.+.... .+...|+.+|...+.+.+.+
T Consensus 136 ~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~-~~~~~~~-------------------~~~~~Y~asKaa~~~l~~~l 194 (297)
T 1xhl_A 136 FKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSI-VAGPQAH-------------------SGYPYYACAKAALDQYTRCT 194 (297)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCG-GGSSSCC-------------------TTSHHHHHHHHHHHHHHHHH
T ss_pred HhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCc-hhccCCC-------------------CCcchHHHHHHHHHHHHHHH
Confidence 67899999999988865 34 699999996 5442110 12467999999999999888
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCC-Chh-----HHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC---C
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTV-NAS-----IIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP---S 145 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~---~ 145 (239)
+.+ .|+++.+++|+.+.++...... ... ......+... .+ ...+...+|+|+++++++... .
T Consensus 195 a~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~----~p--~~r~~~pedvA~~v~~l~s~~~~~~ 268 (297)
T 1xhl_A 195 AIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKEC----IP--VGHCGKPEEIANIIVFLADRNLSSY 268 (297)
T ss_dssp HHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTT----CT--TSSCBCHHHHHHHHHHHHCHHHHTT
T ss_pred HHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhc----CC--CCCCcCHHHHHHHHHHHhCCcccCC
Confidence 754 5899999999999876321110 000 0011111111 11 234889999999999988643 2
Q ss_pred CCc-eEEEe-cCCCCHHHHHHHHHHh
Q 026418 146 ASG-RYLCA-ESVLHRGEVVEILAKF 169 (239)
Q Consensus 146 ~~~-~y~~~-~~~~s~~el~~~i~~~ 169 (239)
..| ++++. |..+...+.++.+.+.
T Consensus 269 itG~~i~vdGG~~~~~~~~~~~~~~~ 294 (297)
T 1xhl_A 269 IIGQSIVADGGSTLVMGMQTHDLMSV 294 (297)
T ss_dssp CCSCEEEESTTGGGCCGGGGSCHHHH
T ss_pred ccCcEEEECCCccccccccccchhhh
Confidence 334 66665 5555555544444443
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.52 E-value=8.5e-07 Score=68.72 Aligned_cols=115 Identities=15% Similarity=0.066 Sum_probs=80.6
Q ss_pred chhHhHHHHHHHHHHHhc----------C-----CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----------K-----VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYG 66 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----------~-----v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~s 66 (239)
+++|+.++.++++++.+. + ..++|++||. ..+..... ..+...|+.+
T Consensus 131 ~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~-~~~~~~~~-----------------~~~~~~Y~~s 192 (267)
T 1sny_A 131 LQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSI-LGSIQGNT-----------------DGGMYAYRTS 192 (267)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCG-GGCSTTCC-----------------SCCCHHHHHH
T ss_pred HhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecc-cccccCCC-----------------CCCchHHHHH
Confidence 578999999999988654 2 4689999996 54422110 0235679999
Q ss_pred HHHHHHHHHHHHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 67 KAVAEKAAWEEAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 67 K~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
|...+.+++.++.+ .+++++++||+.+..+.... ...+..+|+|+.++.++..
T Consensus 193 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~------------------------~~~~~~~~~a~~~~~~~~~ 248 (267)
T 1sny_A 193 KSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS------------------------SAPLDVPTSTGQIVQTISK 248 (267)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT------------------------TCSBCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC------------------------CCCCCHHHHHHHHHHHHHh
Confidence 99999999988776 58999999999996543210 1246789999999998864
Q ss_pred CC--CCceE-EEecCCCC
Q 026418 144 PS--ASGRY-LCAESVLH 158 (239)
Q Consensus 144 ~~--~~~~y-~~~~~~~s 158 (239)
.. ..|.| ...|..+.
T Consensus 249 ~~~~~~G~~~~~~g~~~~ 266 (267)
T 1sny_A 249 LGEKQNGGFVNYDGTPLA 266 (267)
T ss_dssp CCGGGTTCEECTTSCBCC
T ss_pred cCcCCCCcEEccCCcCcC
Confidence 32 23444 33344443
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.52 E-value=1.2e-06 Score=68.40 Aligned_cols=126 Identities=13% Similarity=0.094 Sum_probs=82.6
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.|+.++++++. +.+..++|++||. +.+... .+...|+.+|...+.+.+.+
T Consensus 129 ~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~asKaa~~~l~~~l 187 (277)
T 4dqx_A 129 MSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSY-TATSAI--------------------ADRTAYVASKGAISSLTRAM 187 (277)
T ss_dssp HHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCG-GGTSCC--------------------TTBHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHHcCCcEEEEECch-hhCcCC--------------------CCChhHHHHHHHHHHHHHHH
Confidence 5799999999988884 3345699999996 444211 23577999999999999988
Q ss_pred HHHc---CccEEEEecCcccCCCCCC---CCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-
Q 026418 78 AVAR---GVDLVVVNPVLVLGPLLQS---TVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG- 148 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~- 148 (239)
+.+. |+++..++||.+..+.... ...........+.... ....+.+.+|+|+++++++.... ..|
T Consensus 188 a~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~------~~~r~~~pedvA~~v~~L~s~~~~~itG~ 261 (277)
T 4dqx_A 188 AMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARA------VMDRMGTAEEIAEAMLFLASDRSRFATGS 261 (277)
T ss_dssp HHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTS------TTCSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred HHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcC------cccCCcCHHHHHHHHHHHhCCccCCCcCC
Confidence 7764 8999999999997652000 0000001111111111 12447789999999999886432 234
Q ss_pred eEEEec
Q 026418 149 RYLCAE 154 (239)
Q Consensus 149 ~y~~~~ 154 (239)
++++.|
T Consensus 262 ~i~vdG 267 (277)
T 4dqx_A 262 ILTVDG 267 (277)
T ss_dssp EEEESS
T ss_pred EEEECC
Confidence 666663
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=98.51 E-value=1.2e-06 Score=68.47 Aligned_cols=125 Identities=11% Similarity=-0.009 Sum_probs=85.5
Q ss_pred chhHhHHHHHHHHHHHhc---CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA---KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA 78 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~---~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~ 78 (239)
+++|+.++.++++++... +..++|++||. +.+... .+...|+.+|.+.+.+.+.++
T Consensus 136 ~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~asKaal~~~~~~la 194 (280)
T 3nrc_A 136 HDISAYSFAALAKEGRSMMKNRNASMVALTYI-GAEKAM--------------------PSYNTMGVAKASLEATVRYTA 194 (280)
T ss_dssp HHHHTHHHHHHHHHHHHHHTTTTCEEEEEECG-GGTSCC--------------------TTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCeEEEEecc-ccccCC--------------------CCchhhHHHHHHHHHHHHHHH
Confidence 578999999999998754 24689999996 433111 135679999999999998887
Q ss_pred HH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eEEE
Q 026418 79 VA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYLC 152 (239)
Q Consensus 79 ~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y~~ 152 (239)
.+ .|+++..++|+.+..+...... .............+ ...+...+|+|+++++++... ...| ++++
T Consensus 195 ~e~~~~gi~v~~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~p------~~~~~~pedvA~~v~~l~s~~~~~~tG~~i~v 267 (280)
T 3nrc_A 195 LALGEDGIKVNAVSAGPIKTLAASGIS-NFKKMLDYNAMVSP------LKKNVDIMEVGNTVAFLCSDMATGITGEVVHV 267 (280)
T ss_dssp HHHGGGTCEEEEEEECCCCCSGGGGCT-THHHHHHHHHHHST------TCSCCCHHHHHHHHHHTTSGGGTTCCSCEEEE
T ss_pred HHHHHcCcEEEEEeeccccchhhhcCc-chHHHHHHHHhcCC------CCCCCCHHHHHHHHHHHhCcccCCcCCcEEEE
Confidence 65 5899999999999876533211 11122222222222 134678999999999988643 2334 6666
Q ss_pred ec
Q 026418 153 AE 154 (239)
Q Consensus 153 ~~ 154 (239)
.|
T Consensus 268 dg 269 (280)
T 3nrc_A 268 DA 269 (280)
T ss_dssp ST
T ss_pred CC
Confidence 63
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.51 E-value=3.9e-07 Score=71.23 Aligned_cols=116 Identities=15% Similarity=0.093 Sum_probs=76.6
Q ss_pred chhHhHH----HHHHHHHHHhcCC--CEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHH
Q 026418 2 VEPAVIG----TKNVIVAAAEAKV--RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAW 75 (239)
Q Consensus 2 ~~~Nv~~----t~~ll~a~~~~~v--~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~ 75 (239)
+++|+.+ +++++.++++.++ .++|++||. +.+.... ..+...|+.+|...+.+++
T Consensus 139 ~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~-~~~~~~~------------------~~~~~~Y~~sK~a~~~~~~ 199 (279)
T 1xg5_A 139 FNVNVLALSICTREAYQSMKERNVDDGHIININSM-SGHRVLP------------------LSVTHFYSATKYAVTALTE 199 (279)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCG-GGTSCCS------------------CGGGHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcCh-hhcccCC------------------CCCCchhHHHHHHHHHHHH
Confidence 5789999 7888888888775 799999995 5442110 1235679999999999888
Q ss_pred HHHHH-----cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC
Q 026418 76 EEAVA-----RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS 145 (239)
Q Consensus 76 ~~~~~-----~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 145 (239)
.++.+ .++++.+++|+.+.++............+... .....+++.+|+|++++.++..+.
T Consensus 200 ~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~---------~~~~~~~~~~dvA~~i~~l~~~~~ 265 (279)
T 1xg5_A 200 GLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAAT---------YEQMKCLKPEDVAEAVIYVLSTPA 265 (279)
T ss_dssp HHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHH---------HC---CBCHHHHHHHHHHHHHSCT
T ss_pred HHHHHHhhcCCCeEEEEEecCcccchhhhhhcccChhHHhhh---------cccccCCCHHHHHHHHHHHhcCCc
Confidence 77654 47999999999997653100000000000000 011347889999999999997553
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=98.49 E-value=6.8e-07 Score=69.61 Aligned_cols=125 Identities=10% Similarity=0.055 Sum_probs=83.6
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++.+ .+..++|++||.++..+. .+...|+.+|...+.+.+.+
T Consensus 131 ~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~---------------------~~~~~Y~asKaa~~~l~~~l 189 (271)
T 4ibo_A 131 IDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELAR---------------------ATVAPYTVAKGGIKMLTRAM 189 (271)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCC---------------------CCchhHHHHHHHHHHHHHHH
Confidence 67899999999887754 345799999996433321 23567999999999999988
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eEE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYL 151 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y~ 151 (239)
+.+ .|+++..++||.+..+..... .........+....+ ...+...+|+|+++++++... ...| +++
T Consensus 190 a~e~~~~gI~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~p------~~r~~~pedva~~v~~L~s~~~~~itG~~i~ 262 (271)
T 4ibo_A 190 AAEWAQYGIQANAIGPGYMLTDMNQAL-IDNPEFDAWVKARTP------AKRWGKPQELVGTAVFLSASASDYVNGQIIY 262 (271)
T ss_dssp HHHHGGGTEEEEEEEECSBCSGGGHHH-HHCHHHHHHHHHHST------TCSCBCGGGGHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHHhhhCeEEEEEEeccEeCcchhhc-ccCHHHHHHHHhcCC------CCCCcCHHHHHHHHHHHhCccccCCCCcEEE
Confidence 776 589999999999987632100 000111122222221 234678999999999988643 2334 666
Q ss_pred Eec
Q 026418 152 CAE 154 (239)
Q Consensus 152 ~~~ 154 (239)
+.|
T Consensus 263 vdG 265 (271)
T 4ibo_A 263 VDG 265 (271)
T ss_dssp EST
T ss_pred ECC
Confidence 663
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.49 E-value=1.6e-06 Score=67.71 Aligned_cols=123 Identities=13% Similarity=0.036 Sum_probs=81.0
Q ss_pred chhHhHHHHHHHHHHH----hcCC----CEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCc-hHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKV----RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKN-WYCYGKAVAEK 72 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v----~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~-~Y~~sK~~~E~ 72 (239)
+++|+.++.++++++. +.+. .++|++||. +.+.... ... .|+.+|...+.
T Consensus 133 ~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~-~~~~~~~--------------------~~~~~Y~asK~a~~~ 191 (276)
T 2b4q_A 133 MQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSV-AGISAMG--------------------EQAYAYGPSKAALHQ 191 (276)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCG-GGTCCCC--------------------CSCTTHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCH-HHcCCCC--------------------CCccccHHHHHHHHH
Confidence 5789999988887764 3343 799999996 5442111 123 79999999999
Q ss_pred HHHHHHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHc--CCCCccCCCCCCceehHHHHHHHHHhhcCC--C
Q 026418 73 AAWEEAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLN--GSAKTYANSVQAYVHVRDVALAHILVYETP--S 145 (239)
Q Consensus 73 ~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~ 145 (239)
+.+.++.+ .|+++.+++|+.+..+.... ........+.. ..+ ...+.+.+|+|+++++++... .
T Consensus 192 ~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~---~~~~~~~~~~~~~~~p------~~r~~~p~dvA~~v~~l~s~~~~~ 262 (276)
T 2b4q_A 192 LSRMLAKELVGEHINVNVIAPGRFPSRMTRH---IANDPQALEADSASIP------MGRWGRPEEMAALAISLAGTAGAY 262 (276)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECCCCSTTTHH---HHHCHHHHHHHHHTST------TSSCCCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHhcccCeEEEEEEeccCcCcchhh---cchhHHHHHHhhcCCC------CCCcCCHHHHHHHHHHHhCccccC
Confidence 99988765 48999999999998763210 00001111111 111 134789999999999988643 2
Q ss_pred CCc-eEEEec
Q 026418 146 ASG-RYLCAE 154 (239)
Q Consensus 146 ~~~-~y~~~~ 154 (239)
..| ++++.|
T Consensus 263 ~tG~~i~vdG 272 (276)
T 2b4q_A 263 MTGNVIPIDG 272 (276)
T ss_dssp CCSCEEEEST
T ss_pred CCCCEEEeCC
Confidence 234 666653
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.49 E-value=8.7e-07 Score=68.34 Aligned_cols=126 Identities=15% Similarity=0.057 Sum_probs=81.2
Q ss_pred chhHhHHHHHHHHHHHh----cC-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++.++++++.+ .+ ..++|++||.++.++. .....|+.+|...+.+.+.
T Consensus 107 ~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asK~a~~~~~~~ 165 (256)
T 1geg_A 107 YNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGN---------------------PELAVYSSSKFAVRGLTQT 165 (256)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC---------------------TTBHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCC---------------------CCchhHHHHHHHHHHHHHH
Confidence 57899999888877754 34 5799999996443321 1246799999999999988
Q ss_pred HHHH---cCccEEEEecCcccCCCCCCCCC---h-----hHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC-
Q 026418 77 EAVA---RGVDLVVVNPVLVLGPLLQSTVN---A-----SIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP- 144 (239)
Q Consensus 77 ~~~~---~~~~~~i~Rp~~v~G~~~~~~~~---~-----~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~- 144 (239)
++.+ .|+++.+++|+.+.++....... . .......+.... + ...+.+.+|+|+++++++...
T Consensus 166 la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----p--~~r~~~p~dvA~~v~~l~s~~~ 239 (256)
T 1geg_A 166 AARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRI----T--LGRLSEPEDVAACVSYLASPDS 239 (256)
T ss_dssp HHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTC----T--TCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcC----C--CCCCcCHHHHHHHHHHHhCccc
Confidence 8765 48999999999998753110000 0 000011111111 1 234789999999999988643
Q ss_pred -CCCc-eEEEec
Q 026418 145 -SASG-RYLCAE 154 (239)
Q Consensus 145 -~~~~-~y~~~~ 154 (239)
...| ++.+.|
T Consensus 240 ~~~tG~~i~vdG 251 (256)
T 1geg_A 240 DYMTGQSLLIDG 251 (256)
T ss_dssp TTCCSCEEEESS
T ss_pred cCCCCCEEEeCC
Confidence 2234 666553
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=98.47 E-value=6.3e-07 Score=75.56 Aligned_cols=128 Identities=13% Similarity=0.094 Sum_probs=87.7
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+++|+.|+.++.+++.+.+..+||++||.+++++.. ....|+.+|...+.+.+++. ..
T Consensus 334 ~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~~---------------------g~~~Yaaaka~l~~la~~~~-~~ 391 (486)
T 2fr1_A 334 SRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAP---------------------GLGGYAPGNAYLDGLAQQRR-SD 391 (486)
T ss_dssp THHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCT---------------------TCTTTHHHHHHHHHHHHHHH-HT
T ss_pred HHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCCC---------------------CCHHHHHHHHHHHHHHHHHH-hc
Confidence 578999999999999998889999999986666532 14679999999998887764 56
Q ss_pred CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCceEEEecCCCCHHH
Q 026418 82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGE 161 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~~~~~s~~e 161 (239)
|+++++++|+.+.++++... .... .+.......++.+|+++++..++..... .+.+. .+.|..
T Consensus 392 gi~v~~i~pG~~~~~gm~~~------~~~~-------~~~~~g~~~i~~e~~a~~l~~~l~~~~~--~~~v~--~~d~~~ 454 (486)
T 2fr1_A 392 GLPATAVAWGTWAGSGMAEG------PVAD-------RFRRHGVIEMPPETACRALQNALDRAEV--CPIVI--DVRWDR 454 (486)
T ss_dssp TCCCEEEEECCBC-------------------------CTTTTEECBCHHHHHHHHHHHHHTTCS--SCEEC--EECHHH
T ss_pred CCeEEEEECCeeCCCcccch------hHHH-------HHHhcCCCCCCHHHHHHHHHHHHhCCCC--eEEEE--eCCHHH
Confidence 99999999999987642211 0000 1111234578999999999999986543 22222 245666
Q ss_pred HHHHHHH
Q 026418 162 VVEILAK 168 (239)
Q Consensus 162 l~~~i~~ 168 (239)
+...+..
T Consensus 455 ~~~~~~~ 461 (486)
T 2fr1_A 455 FLLAYTA 461 (486)
T ss_dssp HHHHHTS
T ss_pred Hhhhhcc
Confidence 6654443
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=98.47 E-value=1.3e-06 Score=67.09 Aligned_cols=113 Identities=19% Similarity=0.094 Sum_probs=73.7
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.|+.++++++. +.+..++|++||. +.+... .+...|+.+|...+.+.+.+
T Consensus 103 ~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~asKaa~~~~~~~l 161 (248)
T 3asu_A 103 IDTNNKGLVYMTRAVLPGMVERNHGHIINIGST-AGSWPY--------------------AGGNVYGATKAFVRQFSLNL 161 (248)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCG-GGTSCC--------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCCceEEEEccc-hhccCC--------------------CCCchHHHHHHHHHHHHHHH
Confidence 6789999999998886 4456799999996 433110 12567999999999999988
Q ss_pred HHHc---CccEEEEecCcccC-CCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 78 AVAR---GVDLVVVNPVLVLG-PLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
+.+. |+++..++||.+.| +................ + .....+..+|+|+++++++..+
T Consensus 162 a~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~~~~~~~~-------~--~~~~~~~p~dvA~~v~~l~s~~ 223 (248)
T 3asu_A 162 RTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKT-------Y--QNTVALTPEDVSEAVWWVSTLP 223 (248)
T ss_dssp HHHTTTSCCEEEEEEECSBCC-------------------------------CCBCHHHHHHHHHHHHHSC
T ss_pred HHHhhhcCcEEEEEeccccccCcchhhcccCchHHHHHH-------H--hccCCCCHHHHHHHHHHHhcCC
Confidence 7663 89999999999985 32110000000000000 0 0122468999999999998754
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.47 E-value=1.1e-06 Score=66.79 Aligned_cols=102 Identities=20% Similarity=0.049 Sum_probs=67.4
Q ss_pred chhHhHHHHHHHHH----HHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVA----AAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a----~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.+++++ +++.+..++|++||. ..+... .+...|+.+|...+.+.+.+
T Consensus 106 ~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~-~~~~~~--------------------~~~~~Y~~sK~a~~~~~~~l 164 (234)
T 2ehd_A 106 LDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSL-AGKNPF--------------------KGGAAYNASKFGLLGLAGAA 164 (234)
T ss_dssp HHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCT-TTTSCC--------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCc-hhcCCC--------------------CCCchhhHHHHHHHHHHHHH
Confidence 57899998755554 456667899999995 544211 23567999999999988877
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
+.+ .|+++.++||+.+..+.... .. .. ..+++.+|+|++++.++..+
T Consensus 165 a~e~~~~gi~v~~v~Pg~v~t~~~~~--------~~----~~--------~~~~~~~dvA~~~~~l~~~~ 214 (234)
T 2ehd_A 165 MLDLREANVRVVNVLPGSVDTGFAGN--------TP----GQ--------AWKLKPEDVAQAVLFALEMP 214 (234)
T ss_dssp HHHHGGGTEEEEEEECC------------------------------------CCHHHHHHHHHHHHHSC
T ss_pred HHHHhhcCcEEEEEEeCCCcCCcccc--------cc----cc--------cCCCCHHHHHHHHHHHhCCC
Confidence 654 48999999999987643110 00 00 11578999999999998754
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=98.47 E-value=6.6e-07 Score=69.18 Aligned_cols=127 Identities=15% Similarity=0.019 Sum_probs=81.1
Q ss_pred chhHhHHHHHHHHHHHhcCC--CEEEEccchhhhc-cCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKV--RRVVFTSSIGAVY-MDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA 78 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v--~~~i~~Ss~~~vy-~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~ 78 (239)
+++|+.|+.++++++...-. .++|++||. +.+ ... .+...|+.+|...+.+.+.++
T Consensus 115 ~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~-~~~~~~~--------------------~~~~~Y~asKaa~~~l~~~la 173 (259)
T 3edm_A 115 LDVNLTSLFLTAKTALPKMAKGGAIVTFSSQ-AGRDGGG--------------------PGALAYATSKGAVMTFTRGLA 173 (259)
T ss_dssp HHHHTHHHHHHHHHHGGGEEEEEEEEEECCH-HHHHCCS--------------------TTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCEEEEEcCH-HhccCCC--------------------CCcHHHHHHHHHHHHHHHHHH
Confidence 67999999999999987642 389999996 443 211 135679999999999999988
Q ss_pred HHcC--ccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-eEEEe
Q 026418 79 VARG--VDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYLCA 153 (239)
Q Consensus 79 ~~~~--~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~ 153 (239)
.+.+ +++..+.|+.+..+....... ......+... .....+.+.+|+|+++++++.... ..| ++++.
T Consensus 174 ~e~~~~I~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~~------~p~~r~~~pedva~~v~~L~s~~~~~itG~~i~vd 245 (259)
T 3edm_A 174 KEVGPKIRVNAVCPGMISTTFHDTFTK--PEVRERVAGA------TSLKREGSSEDVAGLVAFLASDDAAYVTGACYDIN 245 (259)
T ss_dssp HHHTTTCEEEEEEECCBCC------------------------------CCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred HHHCCCCEEEEEEECCCcCcccccccC--hHHHHHHHhc------CCCCCCcCHHHHHHHHHHHcCccccCccCCEEEEC
Confidence 7754 888899999997654221100 0011111111 112447789999999999886432 234 77777
Q ss_pred cCCC
Q 026418 154 ESVL 157 (239)
Q Consensus 154 ~~~~ 157 (239)
|...
T Consensus 246 Gg~~ 249 (259)
T 3edm_A 246 GGVL 249 (259)
T ss_dssp BCSS
T ss_pred CCcC
Confidence 5443
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=98.46 E-value=1.3e-06 Score=67.52 Aligned_cols=107 Identities=17% Similarity=0.029 Sum_probs=73.1
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++.. .+..++|++||. +.+... .+...|+.+|...+.+++.+
T Consensus 135 ~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~asKaa~~~l~~~l 193 (262)
T 3rkr_A 135 IAVNLKAPYLLLRAFAPAMIAAKRGHIINISSL-AGKNPV--------------------ADGAAYTASKWGLNGLMTSA 193 (262)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSS-CSSCCC--------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHhCCCceEEEEech-hhcCCC--------------------CCCchHHHHHHHHHHHHHHH
Confidence 67899999999998743 456799999996 433111 23577999999999999888
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSA 146 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~ 146 (239)
+.+ .|+++..++||.+..+.... .... .....++..+|+|+++++++.....
T Consensus 194 a~e~~~~gi~v~~v~PG~v~t~~~~~-----------~~~~------~~~~~~~~p~dvA~~v~~l~s~~~~ 248 (262)
T 3rkr_A 194 AEELRQHQVRVSLVAPGSVRTEFGVG-----------LSAK------KSALGAIEPDDIADVVALLATQADQ 248 (262)
T ss_dssp HHHHGGGTCEEEEEEECCC---------------------------------CCCHHHHHHHHHHHHTCCTT
T ss_pred HHHhhhcCcEEEEEecCCCcCCcccc-----------cccc------cccccCCCHHHHHHHHHHHhcCccc
Confidence 765 58999999999996543110 0000 0123467899999999999876543
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=98.45 E-value=1.4e-06 Score=67.99 Aligned_cols=125 Identities=14% Similarity=0.112 Sum_probs=84.0
Q ss_pred chhHhHHHHHHHHHHHhc----C-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----K-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++.++++++.+. + -.++|++||.++..+... .+...|+.+|...+.+.+.
T Consensus 137 ~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~-------------------~~~~~Y~asKaa~~~l~~~ 197 (276)
T 3r1i_A 137 QDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIP-------------------QQVSHYCTSKAAVVHLTKA 197 (276)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCS-------------------SCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCC-------------------CCcchHHHHHHHHHHHHHH
Confidence 578999999999988543 3 268999999633322110 1356799999999999999
Q ss_pred HHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eE
Q 026418 77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RY 150 (239)
Q Consensus 77 ~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y 150 (239)
++.+ .|+++..++|+.+..+..... ......+....+ ...+...+|+|+++++++... ...| ++
T Consensus 198 la~e~~~~gIrvn~v~PG~v~T~~~~~~----~~~~~~~~~~~p------~~r~~~pedvA~~v~fL~s~~~~~itG~~i 267 (276)
T 3r1i_A 198 MAVELAPHQIRVNSVSPGYIRTELVEPL----ADYHALWEPKIP------LGRMGRPEELTGLYLYLASAASSYMTGSDI 267 (276)
T ss_dssp HHHHHGGGTEEEEEEEECCBCSTTTGGG----GGGHHHHGGGST------TSSCBCGGGSHHHHHHHHSGGGTTCCSCEE
T ss_pred HHHHHhhcCcEEEEEeeCCCcCCccccc----hHHHHHHHhcCC------CCCCcCHHHHHHHHHHHcCccccCccCcEE
Confidence 8876 589999999999987643211 111122222211 234778999999999988643 2234 66
Q ss_pred EEecC
Q 026418 151 LCAES 155 (239)
Q Consensus 151 ~~~~~ 155 (239)
++.|.
T Consensus 268 ~vdGG 272 (276)
T 3r1i_A 268 VIDGG 272 (276)
T ss_dssp EESTT
T ss_pred EECcC
Confidence 66643
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=98.45 E-value=1.8e-06 Score=68.20 Aligned_cols=117 Identities=16% Similarity=0.137 Sum_probs=74.8
Q ss_pred chhHhHHHHHHHHHHHh----cC-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.|+.++++++.. .+ ..++|++||.++.++. .....|+.||...+.+.+.
T Consensus 136 ~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asKaa~~~~~~~ 194 (301)
T 3tjr_A 136 IDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPN---------------------AGLGTYGVAKYGVVGLAET 194 (301)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCC---------------------TTBHHHHHHHHHHHHHHHH
T ss_pred HHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCC---------------------CCchHHHHHHHHHHHHHHH
Confidence 67899999999999743 33 4689999996333211 1356799999999999888
Q ss_pred HHHHc---CccEEEEecCcccCCCCCCCCChhHHHHHHH---HcCCCC-ccC--CCCCCceehHHHHHHHHHhhcCC
Q 026418 77 EAVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKY---LNGSAK-TYA--NSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 77 ~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~---~~~~~~-~~~--~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
++.+. |+++..++||.+..+.... ....... ....+. .++ .....+++++|+|++++.++..+
T Consensus 195 la~e~~~~gi~v~~v~PG~v~T~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~~~l~~~ 266 (301)
T 3tjr_A 195 LAREVKPNGIGVSVLCPMVVETKLVSN-----SERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLTADAILAN 266 (301)
T ss_dssp HHHHHGGGTEEEEEECCSCCCSSHHHH-----HHHHC----------------------CCCHHHHHHHHHHHHHHT
T ss_pred HHHHhcccCcEEEEEECCccccccccc-----cccccchhhccccChhhhccccccccCCCCHHHHHHHHHHHHhcC
Confidence 87653 8999999999997542100 0000000 000000 111 12345899999999999999855
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=98.45 E-value=1.3e-06 Score=67.01 Aligned_cols=124 Identities=14% Similarity=0.056 Sum_probs=81.7
Q ss_pred chhHhHHHHHHHHH----HHhcC-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVA----AAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a----~~~~~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++.+++++ +++.+ ..++|++||.++..+. .....|+.+|...+.+.+.
T Consensus 108 ~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asKaa~~~~~~~ 166 (247)
T 3rwb_A 108 IDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGT---------------------PNMAAYVAAKGGVIGFTRA 166 (247)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTC---------------------TTCHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCC---------------------CCchhhHHHHHHHHHHHHH
Confidence 67899999999988 45545 5799999996443321 1256799999999999988
Q ss_pred HHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eE
Q 026418 77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RY 150 (239)
Q Consensus 77 ~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y 150 (239)
++.+ .|+++..++||.+..+............+.... . ....+...+|+|+++.+++... ...| ++
T Consensus 167 la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~--~------~~~r~~~pedva~~v~~L~s~~~~~itG~~i 238 (247)
T 3rwb_A 167 LATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEML--Q------AMKGKGQPEHIADVVSFLASDDARWITGQTL 238 (247)
T ss_dssp HHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHHH--S------SSCSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred HHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHHhcc--c------ccCCCcCHHHHHHHHHHHhCccccCCCCCEE
Confidence 8776 589999999999976532111000000011100 1 1233567999999999988643 2234 66
Q ss_pred EEec
Q 026418 151 LCAE 154 (239)
Q Consensus 151 ~~~~ 154 (239)
++.|
T Consensus 239 ~vdG 242 (247)
T 3rwb_A 239 NVDA 242 (247)
T ss_dssp EEST
T ss_pred EECC
Confidence 6654
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=98.45 E-value=3.8e-06 Score=66.89 Aligned_cols=127 Identities=16% Similarity=0.093 Sum_probs=82.9
Q ss_pred chhHhHHHHHHHHHHHh----cC-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++.++++++.. .+ -.++|++||.++.++. .....|+.+|...+.+.+.
T Consensus 163 ~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~---------------------~~~~~Y~asKaa~~~l~~~ 221 (317)
T 3oec_A 163 LQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGA---------------------PGQSHYAASKHGVQGLMLS 221 (317)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCC---------------------TTBHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCC---------------------CCCcchHHHHHHHHHHHHH
Confidence 67999999999998843 33 4679999996333211 1256799999999999999
Q ss_pred HHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcC---CCC--------ccCCCCCCceehHHHHHHHHHhhc
Q 026418 77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNG---SAK--------TYANSVQAYVHVRDVALAHILVYE 142 (239)
Q Consensus 77 ~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~---~~~--------~~~~~~~~~i~v~D~a~~~~~~~~ 142 (239)
++.+ .|+++..++||.+.++.... ......+... ... ........+++.+|+|+++++++.
T Consensus 222 la~e~~~~gI~vn~v~PG~v~T~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~pedvA~av~fL~s 296 (317)
T 3oec_A 222 LANEVGRHNIRVNSVNPGAVNTEMALN-----EKLLKMFLPHLENPTREDAAELFSQLTLLPIPWVEPEDVSNAVAWLAS 296 (317)
T ss_dssp HHHHHGGGTEEEEEEEECSBSSHHHHC-----HHHHHHHCTTCSSCCHHHHHHHHTTTCSSSSSSBCHHHHHHHHHHHTS
T ss_pred HHHHHhhcCeEEEEEecCcccCccccc-----hhhhhhhhhhccccchhHHHHHHhhhccCCCCCCCHHHHHHHHHHHcC
Confidence 8876 38999999999998763210 0011111100 000 001111568899999999999885
Q ss_pred CC--CCCc-eEEEec
Q 026418 143 TP--SASG-RYLCAE 154 (239)
Q Consensus 143 ~~--~~~~-~y~~~~ 154 (239)
.. ...| ++++.|
T Consensus 297 ~~a~~itG~~i~vdG 311 (317)
T 3oec_A 297 DEARYIHGAAIPVDG 311 (317)
T ss_dssp GGGTTCCSCEEEEST
T ss_pred CcccCCCCCEEEECc
Confidence 43 2234 676664
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=98.44 E-value=3.7e-06 Score=66.18 Aligned_cols=125 Identities=10% Similarity=-0.042 Sum_probs=83.1
Q ss_pred chhHhHHHHHHHHHHHhcC--CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~--v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++.++++++...- -.++|++||. +.+... .....|+.+|...+.+.+.++.
T Consensus 141 ~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~-~~~~~~--------------------~~~~~Y~asKaa~~~l~~~la~ 199 (293)
T 3grk_A 141 MLISVYSLTAVSRRAEKLMADGGSILTLTYY-GAEKVM--------------------PNYNVMGVAKAALEASVKYLAV 199 (293)
T ss_dssp HHHHTHHHHHHHHHHHHHTTTCEEEEEEECG-GGTSBC--------------------TTTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccCCCEEEEEeeh-hhccCC--------------------CchHHHHHHHHHHHHHHHHHHH
Confidence 6789999999999997643 3589999996 433211 1256799999999999998877
Q ss_pred H---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eEEEe
Q 026418 80 A---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYLCA 153 (239)
Q Consensus 80 ~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y~~~ 153 (239)
+ .|+++..++|+.+..+....... ............+ ...+...+|+|+++++++... ...| ++++.
T Consensus 200 e~~~~gI~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~p------~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vd 272 (293)
T 3grk_A 200 DLGPQNIRVNAISAGPIKTLAASGIGD-FRYILKWNEYNAP------LRRTVTIDEVGDVGLYFLSDLSRSVTGEVHHAD 272 (293)
T ss_dssp HHGGGTEEEEEEEECCCCC------CC-HHHHHHHHHHHST------TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred HHhHhCCEEEEEecCCCcchhhhcccc-hHHHHHHHHhcCC------CCCCCCHHHHHHHHHHHcCccccCCcceEEEEC
Confidence 6 48999999999998764322111 1122222222222 134677999999999988643 2334 66666
Q ss_pred c
Q 026418 154 E 154 (239)
Q Consensus 154 ~ 154 (239)
|
T Consensus 273 G 273 (293)
T 3grk_A 273 S 273 (293)
T ss_dssp T
T ss_pred C
Confidence 3
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.44 E-value=5.7e-06 Score=66.20 Aligned_cols=122 Identities=12% Similarity=-0.033 Sum_probs=84.0
Q ss_pred chhHhHHHHHHHHHHHh----cC------CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AK------VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAE 71 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~------v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E 71 (239)
+++|+.++.++++++.. .+ ..++|++||. ..+... .+...|+.+|...+
T Consensus 184 ~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~IV~isS~-~~~~~~--------------------~~~~~Y~asKaal~ 242 (328)
T 2qhx_A 184 FGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDA-MTNQPL--------------------LGYTIYTMAKGALE 242 (328)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHSCGGGSCSCEEEEEECCT-TTTSCC--------------------TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcCCCCCcEEEEECch-hhccCC--------------------CCcHHHHHHHHHHH
Confidence 57899999999988763 34 5799999996 433110 13567999999999
Q ss_pred HHHHHHHHHc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CC
Q 026418 72 KAAWEEAVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SA 146 (239)
Q Consensus 72 ~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~ 146 (239)
.+.+.++.+. |+++..++|+.+..+. . .. ...+..+....+. + ..+...+|+|+++++++... ..
T Consensus 243 ~l~~~la~el~~~gIrvn~v~PG~v~T~~-~-~~---~~~~~~~~~~~p~--~---~r~~~pedvA~~v~~l~s~~~~~i 312 (328)
T 2qhx_A 243 GLTRSAALELAPLQIRVNGVGPGLSVLVD-D-MP---PAVWEGHRSKVPL--Y---QRDSSAAEVSDVVIFLCSSKAKYI 312 (328)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEESSBSCCC-C-SC---HHHHHHHHTTCTT--T---TSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHhhcCcEEEEEecCcccCCc-c-cc---HHHHHHHHhhCCC--C---CCCCCHHHHHHHHHHHhCccccCc
Confidence 9998887764 8999999999998875 2 11 2233333332221 1 14678999999999998632 23
Q ss_pred Cc-eEEEec
Q 026418 147 SG-RYLCAE 154 (239)
Q Consensus 147 ~~-~y~~~~ 154 (239)
.| ++++.|
T Consensus 313 tG~~i~vdG 321 (328)
T 2qhx_A 313 TGTCVKVDG 321 (328)
T ss_dssp CSCEEEEST
T ss_pred cCcEEEECC
Confidence 34 566653
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.43 E-value=5.6e-06 Score=65.33 Aligned_cols=126 Identities=18% Similarity=0.171 Sum_probs=83.0
Q ss_pred chhHhHHHHHHHHHHHhc----C-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----K-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++.++++++... + ..++|++||.++..+. .....|+.+|...+.+.+.
T Consensus 146 ~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~~---------------------~~~~~Y~asKaa~~~l~~~ 204 (299)
T 3t7c_A 146 IDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGA---------------------ENIGNYIASKHGLHGLMRT 204 (299)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSCC---------------------TTCHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCC---------------------CCcchHHHHHHHHHHHHHH
Confidence 679999999999987543 2 5789999996333211 1256799999999999988
Q ss_pred HHHHc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCC--C----------ccCCCCCCceehHHHHHHHHHhh
Q 026418 77 EAVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSA--K----------TYANSVQAYVHVRDVALAHILVY 141 (239)
Q Consensus 77 ~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~--~----------~~~~~~~~~i~v~D~a~~~~~~~ 141 (239)
++.+. |+++..++||.+..+..... . ......... . ........+...+|+|+++++++
T Consensus 205 la~e~~~~gI~vn~v~PG~v~T~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~pedvA~~v~fL~ 278 (299)
T 3t7c_A 205 MALELGPRNIRVNIVCPSSVATPMLLNE-----P-TYRMFRPDLENPTVEDFQVASRQMHVLPIPYVEPADISNAILFLV 278 (299)
T ss_dssp HHHHHGGGTEEEEEEEESCBSSTTTSSH-----H-HHHHHCTTSSSCCHHHHHHHHHHHSSSSCSCBCHHHHHHHHHHHH
T ss_pred HHHHhcccCcEEEEEecCCccCcccccc-----c-hhhhhhhhhccchhhHHHHHhhhhcccCcCCCCHHHHHHHHHHHh
Confidence 87764 89999999999988753210 0 001110000 0 00000134788999999999998
Q ss_pred cCCC--CCc-eEEEec
Q 026418 142 ETPS--ASG-RYLCAE 154 (239)
Q Consensus 142 ~~~~--~~~-~y~~~~ 154 (239)
.... ..| ++++.|
T Consensus 279 s~~a~~itG~~i~vdG 294 (299)
T 3t7c_A 279 SDDARYITGVSLPVDG 294 (299)
T ss_dssp SGGGTTCCSCEEEEST
T ss_pred CcccccCcCCEEeeCC
Confidence 6432 234 666653
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.43 E-value=9.3e-07 Score=69.12 Aligned_cols=126 Identities=13% Similarity=0.089 Sum_probs=83.3
Q ss_pred chhHhHHHHHHHHHHHhc----CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++... + .++|++||. +.+.... .+...|+.+|...+.+.+.+
T Consensus 118 ~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~-~~~~~~~-------------------~~~~~Y~asK~a~~~~~~~l 176 (280)
T 1xkq_A 118 LKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSI-VAGPQAQ-------------------PDFLYYAIAKAALDQYTRST 176 (280)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCG-GGSSSCC-------------------CSSHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCc-cccCCCC-------------------CcccHHHHHHHHHHHHHHHH
Confidence 578999999999988653 4 799999996 5442110 12567999999999999888
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCC-Chh-----HHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC---C
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTV-NAS-----IIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP---S 145 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~---~ 145 (239)
+.+ .|+++.+++|+.+.++...... ... ......+... .+ ...+.+.+|+|+++++++... .
T Consensus 177 a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~----~p--~~~~~~pedvA~~v~~l~s~~~~~~ 250 (280)
T 1xkq_A 177 AIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKEC----IP--IGAAGKPEHIANIILFLADRNLSFY 250 (280)
T ss_dssp HHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTT----CT--TSSCBCHHHHHHHHHHHHCHHHHTT
T ss_pred HHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcC----CC--CCCCCCHHHHHHHHHHhcCcccccC
Confidence 754 5899999999999887421110 000 0011111111 11 235889999999999988643 2
Q ss_pred CCc-eEEEec
Q 026418 146 ASG-RYLCAE 154 (239)
Q Consensus 146 ~~~-~y~~~~ 154 (239)
..| ++++.|
T Consensus 251 ~tG~~i~vdg 260 (280)
T 1xkq_A 251 ILGQSIVADG 260 (280)
T ss_dssp CCSCEEEEST
T ss_pred ccCCeEEECC
Confidence 334 666654
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=98.43 E-value=2.2e-08 Score=80.27 Aligned_cols=85 Identities=13% Similarity=0.056 Sum_probs=64.0
Q ss_pred chhHhHHHHHHHHHHHhcC-CC-EEEEccchhhhccCCCCCCCcccc-CCCCCChhhcccCCchHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK-VR-RVVFTSSIGAVYMDPNRSPDDVVD-ESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA 78 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~-v~-~~i~~Ss~~~vy~~~~~~~~~~~~-E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~ 78 (239)
++.|+.+++++++++++++ .+ +++++|+-..+.. ++. |..+. ..|.+.|+.+|+.+|++...++
T Consensus 102 ~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~--------~~~~~~~~~-----~~p~~~yg~tkl~~er~~~~~a 168 (327)
T 1y7t_A 102 LQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNA--------LIAYKNAPG-----LNPRNFTAMTRLDHNRAKAQLA 168 (327)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHH--------HHHHHTCTT-----SCGGGEEECCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhH--------HHHHHHcCC-----CChhheeccchHHHHHHHHHHH
Confidence 5789999999999999986 54 7888877311110 111 22100 1345679999999999999999
Q ss_pred HHcCccEEEEecCcccCCCCC
Q 026418 79 VARGVDLVVVNPVLVLGPLLQ 99 (239)
Q Consensus 79 ~~~~~~~~i~Rp~~v~G~~~~ 99 (239)
+..|++.+++|+++|||++..
T Consensus 169 ~~~g~~~~~vr~~~V~G~h~~ 189 (327)
T 1y7t_A 169 KKTGTGVDRIRRMTVWGNHSS 189 (327)
T ss_dssp HHHTCCGGGEECCEEEBCSST
T ss_pred HHhCcChhheeeeEEEcCCCC
Confidence 889999999999999998753
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.43 E-value=2.1e-07 Score=72.49 Aligned_cols=104 Identities=16% Similarity=0.037 Sum_probs=76.1
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++. +.+..++|++||. +.+... .+...|+.+|...+.+++.+
T Consensus 136 ~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~-~~~~~~--------------------~~~~~Y~~sK~a~~~l~~~l 194 (272)
T 1yb1_A 136 FEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASA-AGHVSV--------------------PFLLAYCSSKFAAVGFHKTL 194 (272)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCC-C-CCCH--------------------HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHhcCCCEEEEEech-hhcCCC--------------------CCchhHHHHHHHHHHHHHHH
Confidence 5789999888777664 4567899999996 444210 12467999999999999988
Q ss_pred HHHc------CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC
Q 026418 78 AVAR------GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS 145 (239)
Q Consensus 78 ~~~~------~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 145 (239)
+.+. |++++++||+.+.++..... .. ....+++.+|+|++++.++..+.
T Consensus 195 a~e~~~~~~~gi~v~~v~Pg~v~t~~~~~~-------~~------------~~~~~~~~~dva~~i~~~~~~~~ 249 (272)
T 1yb1_A 195 TDELAALQITGVKTTCLCPNFVNTGFIKNP-------ST------------SLGPTLEPEEVVNRLMHGILTEQ 249 (272)
T ss_dssp HHHHHHTTCTTEEEEEEEETHHHHCSTTCT-------HH------------HHCCCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhCCCCeEEEEEeCCcccCCccccc-------cc------------cccCCCCHHHHHHHHHHHHHcCC
Confidence 7764 79999999999987642110 00 01347889999999999998553
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=98.43 E-value=4.3e-06 Score=65.88 Aligned_cols=126 Identities=10% Similarity=0.004 Sum_probs=84.2
Q ss_pred chhHhHHHHHHHHHHHhcC--CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCC-chHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK-NWYCYGKAVAEKAAWEEA 78 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~--v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~-~~Y~~sK~~~E~~~~~~~ 78 (239)
+++|+.++.++++++...= -.++|++||.++.++.+ .. ..|+.+|...+.+.+.++
T Consensus 149 ~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~---------------------~~~~~Y~asKaa~~~~~~~la 207 (297)
T 1d7o_A 149 ISASSYSFVSLLSHFLPIMNPGGASISLTYIASERIIP---------------------GYGGGMSSAKAALESDTRVLA 207 (297)
T ss_dssp HHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSCCT---------------------TCTTTHHHHHHHHHHHHHHHH
T ss_pred HHHhhhHHHHHHHHHHHHhccCceEEEEeccccccCCC---------------------CcchHHHHHHHHHHHHHHHHH
Confidence 6789999999999997641 25899999963332110 12 469999999999988876
Q ss_pred HH----cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eEE
Q 026418 79 VA----RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYL 151 (239)
Q Consensus 79 ~~----~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y~ 151 (239)
.+ .|+++..++|+.+.++..... .........+....+. ..+...+|+|+++++++... ...| +++
T Consensus 208 ~e~~~~~gi~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~p~------~r~~~pedvA~~v~~l~s~~~~~itG~~i~ 280 (297)
T 1d7o_A 208 FEAGRKQNIRVNTISAGPLGSRAAKAI-GFIDTMIEYSYNNAPI------QKTLTADEVGNAAAFLVSPLASAITGATIY 280 (297)
T ss_dssp HHHHHHHCCEEEEEEECCCBCCCSSCC-SHHHHHHHHHHHHSSS------CCCBCHHHHHHHHHHHTSGGGTTCCSCEEE
T ss_pred HHhCcccCcEEEEEeccccccchhhhc-cccHHHHHHhhccCCC------CCCCCHHHHHHHHHHHhCccccCCCCCEEE
Confidence 64 589999999999998764321 1111222222222221 23568999999999988642 2234 666
Q ss_pred EecC
Q 026418 152 CAES 155 (239)
Q Consensus 152 ~~~~ 155 (239)
+.|.
T Consensus 281 vdgG 284 (297)
T 1d7o_A 281 VDNG 284 (297)
T ss_dssp ESTT
T ss_pred ECCC
Confidence 6543
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=98.42 E-value=2.2e-06 Score=65.98 Aligned_cols=120 Identities=15% Similarity=0.001 Sum_probs=80.6
Q ss_pred chhHhHHHHHHHHHH----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++ ++.+..++|++||.++.++. .+...|+.+|...+.+.+.+
T Consensus 121 ~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asK~a~~~l~~~l 179 (252)
T 3f1l_A 121 MQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGR---------------------ANWGAYAASKFATEGMMQVL 179 (252)
T ss_dssp HHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred HhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCC---------------------CCCchhHHHHHHHHHHHHHH
Confidence 679999999999998 44556799999996333211 12567999999999999999
Q ss_pred HHHcC--ccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-eEEE
Q 026418 78 AVARG--VDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYLC 152 (239)
Q Consensus 78 ~~~~~--~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~ 152 (239)
+.+.+ +++..+.|+.+..+ +......... ...+...+|+|+++++++.... ..| ++++
T Consensus 180 a~e~~~~irvn~v~PG~v~t~-----------~~~~~~~~~~------~~~~~~p~dva~~~~~L~s~~~~~itG~~i~v 242 (252)
T 3f1l_A 180 ADEYQQRLRVNCINPGGTRTA-----------MRASAFPTED------PQKLKTPADIMPLYLWLMGDDSRRKTGMTFDA 242 (252)
T ss_dssp HHHTTTTCEEEEEECCSBSSH-----------HHHHHCTTCC------GGGSBCTGGGHHHHHHHHSGGGTTCCSCEEES
T ss_pred HHHhcCCcEEEEEecCcccCc-----------hhhhhCCccc------hhccCCHHHHHHHHHHHcCccccCCCCCEEEe
Confidence 88764 78888999888543 1122211111 1236788999999999886432 334 6666
Q ss_pred e-cCCCCH
Q 026418 153 A-ESVLHR 159 (239)
Q Consensus 153 ~-~~~~s~ 159 (239)
. |...++
T Consensus 243 dgG~~~~~ 250 (252)
T 3f1l_A 243 QPGRKPGI 250 (252)
T ss_dssp SCC-----
T ss_pred CCCcCCCC
Confidence 5 444443
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=98.42 E-value=3.2e-06 Score=65.55 Aligned_cols=130 Identities=15% Similarity=0.122 Sum_probs=81.7
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++.+++. +.+..++|++||. +.+... .+...|+.+|...+.+.+.+
T Consensus 113 ~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~asKaa~~~l~~~l 171 (267)
T 3t4x_A 113 FEVNIMSGVRLTRSYLKKMIERKEGRVIFIASE-AAIMPS--------------------QEMAHYSATKTMQLSLSRSL 171 (267)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCG-GGTSCC--------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcch-hhccCC--------------------CcchHHHHHHHHHHHHHHHH
Confidence 6789999777766654 4556799999996 433111 23577999999999999999
Q ss_pred HHHc---CccEEEEecCcccCCCCCC--------CCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--
Q 026418 78 AVAR---GVDLVVVNPVLVLGPLLQS--------TVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP-- 144 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~-- 144 (239)
+.+. |+++..+.||.+..+.... .................+. .....+.+.+|+|+++++++...
T Consensus 172 a~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~r~~~pedvA~~v~fL~s~~~~ 249 (267)
T 3t4x_A 172 AELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPT--SIIQRLIRPEEIAHLVTFLSSPLSS 249 (267)
T ss_dssp HHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTT--CSSCSCBCTHHHHHHHHHHHSGGGT
T ss_pred HHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCc--ccccCccCHHHHHHHHHHHcCcccc
Confidence 8764 6899999999987642100 0000001111111111000 11346889999999999988643
Q ss_pred CCCc-eEEEec
Q 026418 145 SASG-RYLCAE 154 (239)
Q Consensus 145 ~~~~-~y~~~~ 154 (239)
...| ++++.|
T Consensus 250 ~itG~~i~vdG 260 (267)
T 3t4x_A 250 AINGSALRIDG 260 (267)
T ss_dssp TCCSCEEEEST
T ss_pred CccCCeEEECC
Confidence 2334 676663
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=98.40 E-value=2.6e-06 Score=66.19 Aligned_cols=127 Identities=13% Similarity=0.009 Sum_probs=83.4
Q ss_pred chhHhHHHHHHHHHHHhcCC--CEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKV--RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v--~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++.++++++.+.-. .++|++||. ...... ..+...|+.+|...+.+.+.++.
T Consensus 124 ~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~-~~~~~~-------------------~~~~~~Y~asKaa~~~~~~~la~ 183 (270)
T 3is3_A 124 FSLNTRGQFFVAREAYRHLTEGGRIVLTSSN-TSKDFS-------------------VPKHSLYSGSKGAVDSFVRIFSK 183 (270)
T ss_dssp HHHHTHHHHHHHHHHHHHCCTTCEEEEECCT-TTTTCC-------------------CTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHhcCCeEEEEeCc-hhccCC-------------------CCCCchhHHHHHHHHHHHHHHHH
Confidence 67999999999999987643 389999995 311000 02357799999999999998877
Q ss_pred H---cCccEEEEecCcccCCCCCC-------C--CChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--C
Q 026418 80 A---RGVDLVVVNPVLVLGPLLQS-------T--VNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--S 145 (239)
Q Consensus 80 ~---~~~~~~i~Rp~~v~G~~~~~-------~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~ 145 (239)
+ .|+++..++||.+..+.... . ............... ....+.+.+|+|+++++++... .
T Consensus 184 e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------p~~r~~~p~dvA~~v~~L~s~~~~~ 257 (270)
T 3is3_A 184 DCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHAS------PLHRNGWPQDVANVVGFLVSKEGEW 257 (270)
T ss_dssp HHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHS------TTCSCBCHHHHHHHHHHHTSGGGTT
T ss_pred HhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcC------CCCCCCCHHHHHHHHHHHcCCccCC
Confidence 6 48999999999998764210 0 000011111111111 1234678999999999988643 2
Q ss_pred CCc-eEEEec
Q 026418 146 ASG-RYLCAE 154 (239)
Q Consensus 146 ~~~-~y~~~~ 154 (239)
..| ++++.|
T Consensus 258 itG~~i~vdG 267 (270)
T 3is3_A 258 VNGKVLTLDG 267 (270)
T ss_dssp CCSCEEEEST
T ss_pred ccCcEEEeCC
Confidence 234 666653
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=98.40 E-value=1.4e-06 Score=67.09 Aligned_cols=123 Identities=21% Similarity=0.175 Sum_probs=79.7
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++.+ .+..++|++||.++.++. .....|+.+|...+.+.+.+
T Consensus 115 ~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asK~a~~~~~~~l 173 (253)
T 2nm0_A 115 VETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGS---------------------AGQANYAASKAGLVGFARSL 173 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCH---------------------HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCC---------------------CCcHHHHHHHHHHHHHHHHH
Confidence 57899999999987754 356799999996222210 12467999999999999888
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eEE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYL 151 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y~ 151 (239)
+.+ .|+++.+++|+.+..+.... . .......+....+ ...+++.+|+|++++.++... ...| ++.
T Consensus 174 a~e~~~~gi~vn~v~PG~v~T~~~~~-~--~~~~~~~~~~~~p------~~~~~~p~dvA~~i~~l~s~~~~~~tG~~i~ 244 (253)
T 2nm0_A 174 ARELGSRNITFNVVAPGFVDTDMTKV-L--TDEQRANIVSQVP------LGRYARPEEIAATVRFLASDDASYITGAVIP 244 (253)
T ss_dssp HHHHCSSSEEEEEEEECSBCC------------CHHHHHTTCT------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHhhhcCeEEEEEEeCcCcCcchhh-c--CHHHHHHHHhcCC------CCCCcCHHHHHHHHHHHhCccccCCcCcEEE
Confidence 765 47999999999987653211 0 0001111221111 134789999999999988653 2234 556
Q ss_pred Eec
Q 026418 152 CAE 154 (239)
Q Consensus 152 ~~~ 154 (239)
+.|
T Consensus 245 vdG 247 (253)
T 2nm0_A 245 VDG 247 (253)
T ss_dssp EST
T ss_pred ECC
Confidence 553
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=98.40 E-value=2.3e-06 Score=66.67 Aligned_cols=115 Identities=16% Similarity=0.102 Sum_probs=72.6
Q ss_pred chhHhHHHHHHHHHHHhc----C--CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----K--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAW 75 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----~--v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~ 75 (239)
+++|+.|+.++++++... + -.++|++||.++..+. .+...|+.+|...+.+.+
T Consensus 131 ~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~---------------------~~~~~Y~asKaa~~~l~~ 189 (272)
T 4dyv_A 131 VDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPR---------------------PYSAPYTATKHAITGLTK 189 (272)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCC---------------------TTCHHHHHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCC---------------------CCchHHHHHHHHHHHHHH
Confidence 678999988888877543 2 3589999996332211 235679999999999999
Q ss_pred HHHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCcc-CCCCCCceehHHHHHHHHHhhcCCCCCc
Q 026418 76 EEAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY-ANSVQAYVHVRDVALAHILVYETPSASG 148 (239)
Q Consensus 76 ~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~D~a~~~~~~~~~~~~~~ 148 (239)
.++.+ .|+++..++|+.+..+.... +..+..... ......+.+++|+|+++++++..+....
T Consensus 190 ~la~e~~~~gI~vn~v~PG~v~T~~~~~-----------~~~~~~~~~~~~~~~~~~~pedvA~~v~fL~s~~~~~~ 255 (272)
T 4dyv_A 190 STSLDGRVHDIACGQIDIGNADTPMAQK-----------MKAGVPQADLSIKVEPVMDVAHVASAVVYMASLPLDAN 255 (272)
T ss_dssp HHHHHHGGGTEEEEEEEEEECC-----------------------------------CHHHHHHHHHHHHHSCTTSC
T ss_pred HHHHHhCccCEEEEEEEECcccChhhhh-----------hcccchhhhhcccccCCCCHHHHHHHHHHHhCCCCcCc
Confidence 88766 48999999999997653211 001100000 0112337899999999999998765543
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=98.40 E-value=1e-06 Score=68.42 Aligned_cols=125 Identities=15% Similarity=0.091 Sum_probs=83.3
Q ss_pred chhHhHHHHHHHHHHHhc----C-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----K-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++.++++++.+. + -.++|++||. +.+... .+...|+.+|...+.+.+.
T Consensus 126 ~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~asK~a~~~l~~~ 184 (266)
T 4egf_A 126 IAVNLRAPALLASAVGKAMVAAGEGGAIITVASA-AALAPL--------------------PDHYAYCTSKAGLVMATKV 184 (266)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCG-GGTSCC--------------------TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcch-hhccCC--------------------CCChHHHHHHHHHHHHHHH
Confidence 578999999999888543 2 3589999996 443211 1356799999999999988
Q ss_pred HHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eE
Q 026418 77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RY 150 (239)
Q Consensus 77 ~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y 150 (239)
++.+ .|+++..++|+.+..+....... .......+....+ ...+...+|+|+++++++... ...| ++
T Consensus 185 la~e~~~~gI~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~p------~~r~~~p~dva~~v~~L~s~~~~~itG~~i 257 (266)
T 4egf_A 185 LARELGPHGIRANSVCPTVVLTEMGQRVWG-DEAKSAPMIARIP------LGRFAVPHEVSDAVVWLASDAASMINGVDI 257 (266)
T ss_dssp HHHHHGGGTEEEEEEEESCBCSHHHHHHTC-SHHHHHHHHTTCT------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred HHHHHhhhCeEEEEEEeCCCcCchhhhhcc-ChHHHHHHHhcCC------CCCCcCHHHHHHHHHHHhCchhcCccCcEE
Confidence 8776 48999999999997653110000 0112222322222 234778999999999988643 2334 66
Q ss_pred EEec
Q 026418 151 LCAE 154 (239)
Q Consensus 151 ~~~~ 154 (239)
++.|
T Consensus 258 ~vdG 261 (266)
T 4egf_A 258 PVDG 261 (266)
T ss_dssp EEST
T ss_pred EECC
Confidence 6653
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.40 E-value=1.5e-07 Score=73.05 Aligned_cols=137 Identities=15% Similarity=0.112 Sum_probs=81.2
Q ss_pred chhHhHHHHH----HHHHHHhcC---CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKN----VIVAAAEAK---VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAA 74 (239)
Q Consensus 2 ~~~Nv~~t~~----ll~a~~~~~---v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~ 74 (239)
+++|+.++.. ++.++++.+ ..++|++||. +.+... .+...|+.+|...+.+.
T Consensus 106 ~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~~sK~a~~~~~ 164 (267)
T 2gdz_A 106 LQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSL-AGLMPV--------------------AQQPVYCASKHGIVGFT 164 (267)
T ss_dssp HHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCG-GGTSCC--------------------TTCHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCc-cccCCC--------------------CCCchHHHHHHHHHHHH
Confidence 5678885544 555555542 5799999996 544211 12467999999999988
Q ss_pred HHHH-----HHcCccEEEEecCcccCCCCCCCCChhHHHHHHHHcC-CCCccCCCCCCceehHHHHHHHHHhhcCCCCCc
Q 026418 75 WEEA-----VARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNG-SAKTYANSVQAYVHVRDVALAHILVYETPSASG 148 (239)
Q Consensus 75 ~~~~-----~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~ 148 (239)
+.++ ...|+++.+++|+.+.++....... .........- .....+.....+++.+|+|++++.++......|
T Consensus 165 ~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~~G 242 (267)
T 2gdz_A 165 RSAALAANLMNSGVRLNAICPGFVNTAILESIEK--EENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIEDDALNG 242 (267)
T ss_dssp HHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGC--HHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHHHCTTCSS
T ss_pred HHHHHHHHhccCCcEEEEEecCcCcchhhhcccc--ccccchhhhHHHHHHHHhccccCCCHHHHHHHHHHHhcCcCCCC
Confidence 8642 2358999999999997653110000 0000000000 000000011347899999999999997654445
Q ss_pred -eEEEe-cCCCCHHH
Q 026418 149 -RYLCA-ESVLHRGE 161 (239)
Q Consensus 149 -~y~~~-~~~~s~~e 161 (239)
++++. +..+++.|
T Consensus 243 ~~~~v~gg~~~~~~~ 257 (267)
T 2gdz_A 243 AIMKITTSKGIHFQD 257 (267)
T ss_dssp CEEEEETTTEEEECC
T ss_pred cEEEecCCCcccccC
Confidence 77776 55555544
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=98.39 E-value=1.3e-06 Score=66.12 Aligned_cols=106 Identities=14% Similarity=0.094 Sum_probs=72.7
Q ss_pred chhHhHHHHHHHHHHHhcCC---CEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKV---RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA 78 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v---~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~ 78 (239)
+++|+.++.++++++...-. .++|++||. ..+... .+...|+.+|...+.+.+.++
T Consensus 100 ~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~-~~~~~~--------------------~~~~~Y~asKaa~~~~~~~la 158 (230)
T 3guy_A 100 IENNLSSAINVLRELVKRYKDQPVNVVMIMST-AAQQPK--------------------AQESTYCAVKWAVKGLIESVR 158 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCCEEEEECCG-GGTSCC--------------------TTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeEEEEeec-ccCCCC--------------------CCCchhHHHHHHHHHHHHHHH
Confidence 57899999999999876421 389999996 443211 235679999999999999998
Q ss_pred HHc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC
Q 026418 79 VAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS 145 (239)
Q Consensus 79 ~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 145 (239)
.+. |+++..++||.+..+.... ..... ....+.+.+|+|++++.++..+.
T Consensus 159 ~e~~~~gi~v~~v~PG~v~t~~~~~-----------~~~~~------~~~~~~~~~dvA~~i~~l~~~~~ 211 (230)
T 3guy_A 159 LELKGKPMKIIAVYPGGMATEFWET-----------SGKSL------DTSSFMSAEDAALMIHGALANIG 211 (230)
T ss_dssp HHTTTSSCEEEEEEECCC---------------------------------CCCHHHHHHHHHHHCCEET
T ss_pred HHHHhcCeEEEEEECCcccChHHHh-----------cCCCC------CcccCCCHHHHHHHHHHHHhCcC
Confidence 775 7999999999987553211 00000 12457889999999999887543
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=98.38 E-value=5.8e-06 Score=63.36 Aligned_cols=113 Identities=21% Similarity=0.153 Sum_probs=76.8
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.|+.++++++.. .+ .++|++||. +.+... .+...|+.+|...+.+.+.+
T Consensus 112 ~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~-~~~~~~--------------------~~~~~Y~asK~a~~~~~~~l 169 (247)
T 2jah_A 112 IDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSI-AGRVNV--------------------RNAAVYQATKFGVNAFSETL 169 (247)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCG-GGTCCC--------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccH-HhcCCC--------------------CCCcHHHHHHHHHHHHHHHH
Confidence 57899999999998853 34 699999996 433110 12567999999999988887
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
+.+ .|+++..++||.+..+....... . ......... + +...++..+|+|+++++++..+
T Consensus 170 a~e~~~~gi~v~~v~PG~v~T~~~~~~~~--~-~~~~~~~~~----~-~~~~~~~pedvA~~v~~l~s~~ 231 (247)
T 2jah_A 170 RQEVTERGVRVVVIEPGTTDTELRGHITH--T-ATKEMYEQR----I-SQIRKLQAQDIAEAVRYAVTAP 231 (247)
T ss_dssp HHHHGGGTCEEEEEEECSBSSSGGGGCCC--H-HHHHHHHHH----T-TTSCCBCHHHHHHHHHHHHHSC
T ss_pred HHHhcccCcEEEEEECCCCCCcchhcccc--h-hhHHHHHhc----c-cccCCCCHHHHHHHHHHHhCCC
Confidence 665 48999999999998764221111 1 111111111 1 1122588999999999998754
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=98.38 E-value=9.6e-07 Score=70.66 Aligned_cols=128 Identities=22% Similarity=0.290 Sum_probs=79.6
Q ss_pred chhHhHHHHHHHHHH----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++ ++.+..++|++||.++..+. .....|+.||...+.+.+.+
T Consensus 111 ~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~---------------------~~~~~Y~aSK~a~~~~~~~l 169 (327)
T 1jtv_A 111 LDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGL---------------------PFNDVYCASKFALEGLCESL 169 (327)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCC---------------------CCChHHHHHHHHHHHHHHHH
Confidence 679999999999986 44457899999996333211 12467999999999999988
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhH-----------HHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASI-----------IHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
+.+ .|+++.+++|+.+..+.......... ..+..........+ .+-....+|+|++++.++..
T Consensus 170 a~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~pedvA~~i~~l~~~ 246 (327)
T 1jtv_A 170 AVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVF---REAAQNPEEVAEVFLTALRA 246 (327)
T ss_dssp HHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHH---HHHCBCHHHHHHHHHHHHHC
T ss_pred HHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHHHhh---hhcCCCHHHHHHHHHHHHcC
Confidence 764 68999999999998764221110000 00000000000000 01125789999999999986
Q ss_pred CCCCceEEEe
Q 026418 144 PSASGRYLCA 153 (239)
Q Consensus 144 ~~~~~~y~~~ 153 (239)
+.....|..+
T Consensus 247 ~~~~~~~~tg 256 (327)
T 1jtv_A 247 PKPTLRYFTT 256 (327)
T ss_dssp SSCCSEEESC
T ss_pred CCCCeEEEeC
Confidence 5544455544
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.38 E-value=2.9e-06 Score=66.09 Aligned_cols=113 Identities=17% Similarity=0.107 Sum_probs=71.6
Q ss_pred chhHhHHHHHHHHHHH----hcCCC-EEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVR-RVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~-~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++.++++++. +.+.. ++|++||. +.+... .....|+.+|...+.+.+.
T Consensus 126 ~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~-~~~~~~--------------------~~~~~Y~asKaa~~~l~~~ 184 (272)
T 2nwq_A 126 VDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSV-AGKWPY--------------------PGSHVYGGTKAFVEQFSLN 184 (272)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCG-GGTSCC--------------------TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCc-hhccCC--------------------CCCchHHHHHHHHHHHHHH
Confidence 6789999887777664 44556 99999996 433110 1246799999999999998
Q ss_pred HHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 77 ~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
++.+ .|+++..++|+.+..+................ +. ....+..+|+|+++++++..+
T Consensus 185 la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~-------~~--~~~~~~pedvA~~v~~l~s~~ 246 (272)
T 2nwq_A 185 LRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQARYDKT-------YA--GAHPIQPEDIAETIFWIMNQP 246 (272)
T ss_dssp HHTTCTTSCCEEEEEEECSBC-----------------------------CCCCBCHHHHHHHHHHHHTSC
T ss_pred HHHHhCccCeEEEEEEcCCCcCcchhcccccchHHHHHh-------hc--cCCCCCHHHHHHHHHHHhCCC
Confidence 8765 47999999999998764211000000000000 00 112478999999999999754
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.37 E-value=2.4e-06 Score=66.27 Aligned_cols=113 Identities=19% Similarity=0.183 Sum_probs=73.1
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.|+.++++++.. .+..++|++||.++..+. .....|+.+|...+.+.+.+
T Consensus 109 ~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~---------------------~~~~~Y~asKaal~~l~~~l 167 (264)
T 3tfo_A 109 IDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVV---------------------PTAAVYCATKFAVRAISDGL 167 (264)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccC---------------------CCChhHHHHHHHHHHHHHHH
Confidence 67899999988888743 456799999996333211 12467999999999999998
Q ss_pred HHHc-CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCC-ccCCCCCCceehHHHHHHHHHhhcCCCC
Q 026418 78 AVAR-GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAK-TYANSVQAYVHVRDVALAHILVYETPSA 146 (239)
Q Consensus 78 ~~~~-~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~D~a~~~~~~~~~~~~ 146 (239)
+.+. |+++..++||.+..+..... ...... ........+...+|+|+++++++..+..
T Consensus 168 a~e~~gIrvn~v~PG~v~T~~~~~~-----------~~~~~~~~~~~~~~~~~~pedvA~~v~~l~s~~~~ 227 (264)
T 3tfo_A 168 RQESTNIRVTCVNPGVVESELAGTI-----------THEETMAAMDTYRAIALQPADIARAVRQVIEAPQS 227 (264)
T ss_dssp HHHCSSEEEEEEEECCC----------------------------------CCCHHHHHHHHHHHHHSCTT
T ss_pred HHhCCCCEEEEEecCCCcCcccccc-----------cchhHHHHHHhhhccCCCHHHHHHHHHHHhcCCcc
Confidence 8765 89999999999976532110 000000 0000112247899999999999987654
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.37 E-value=2.7e-06 Score=65.41 Aligned_cols=106 Identities=14% Similarity=0.019 Sum_probs=74.5
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++. +.+..++|++||.++.++. .+...|+.+|...+.+.+.+
T Consensus 114 ~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asKaa~~~l~~~l 172 (250)
T 3nyw_A 114 MEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGF---------------------ADGGIYGSTKFALLGLAESL 172 (250)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC----------------------------CCTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCC---------------------CCCcchHHHHHHHHHHHHHH
Confidence 6789999999999883 3456799999997443321 12567999999999999888
Q ss_pred HHHc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC
Q 026418 78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS 145 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 145 (239)
+.+. |+++..++||.+..+ +....... . ....+++.+|+|+++++++..+.
T Consensus 173 a~e~~~~gi~vn~v~PG~v~T~-----------~~~~~~~~----~--~~~~~~~p~dva~~v~~l~s~~~ 226 (250)
T 3nyw_A 173 YRELAPLGIRVTTLCPGWVNTD-----------MAKKAGTP----F--KDEEMIQPDDLLNTIRCLLNLSE 226 (250)
T ss_dssp HHHHGGGTEEEEEEEESSBCSH-----------HHHHTTCC----S--CGGGSBCHHHHHHHHHHHHTSCT
T ss_pred HHHhhhcCcEEEEEecCcccCc-----------hhhhcCCC----c--ccccCCCHHHHHHHHHHHHcCCC
Confidence 7764 899999999998643 11111111 1 12347899999999999998654
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=98.37 E-value=1.8e-06 Score=66.51 Aligned_cols=114 Identities=15% Similarity=-0.005 Sum_probs=69.0
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.|+.++++++. +.+..++|++||.++.++. .....|+.+|...+.+.+.+
T Consensus 111 ~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asKaa~~~l~~~l 169 (252)
T 3h7a_A 111 WEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGG---------------------SGFAAFASAKFGLRAVAQSM 169 (252)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCC---------------------CCCccHHHHHHHHHHHHHHH
Confidence 6789999999988873 4455799999996443321 12567999999999999888
Q ss_pred HHH---cCccE-EEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCC
Q 026418 78 AVA---RGVDL-VVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSA 146 (239)
Q Consensus 78 ~~~---~~~~~-~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~ 146 (239)
+.+ .|+++ .++.||.+..+...... ......... ..... +...+|+|+++++++..+..
T Consensus 170 a~e~~~~gi~v~n~v~PG~v~T~~~~~~~---~~~~~~~~~------~~~~~-~~~pedvA~~~~~l~s~~~~ 232 (252)
T 3h7a_A 170 ARELMPKNIHVAHLIIDSGVDTAWVRERR---EQMFGKDAL------ANPDL-LMPPAAVAGAYWQLYQQPKS 232 (252)
T ss_dssp HHHHGGGTEEEEEEEEC-------------------------------------CCHHHHHHHHHHHHHCCGG
T ss_pred HHHhhhcCCEEEEEecCCccCChhhhccc---hhhhhhhhh------cCCcc-CCCHHHHHHHHHHHHhCchh
Confidence 776 37888 78999998765322110 000000000 01123 88999999999999986543
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=98.37 E-value=9.2e-06 Score=62.10 Aligned_cols=125 Identities=12% Similarity=0.060 Sum_probs=81.3
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++. +.+..++|++||. +.+... .....|+.+|...+.+.+.+
T Consensus 103 ~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~asK~a~~~~~~~l 161 (244)
T 1zmo_A 103 FEALSIFPILLLQSAIAPLRAAGGASVIFITSS-VGKKPL--------------------AYNPLYGPARAATVALVESA 161 (244)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCG-GGTSCC--------------------TTCTTHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCh-hhCCCC--------------------CCchHHHHHHHHHHHHHHHH
Confidence 5789999999998885 4556899999996 443211 12467999999999999888
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhH--HHHHHHHc-CCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASI--IHILKYLN-GSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG- 148 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~- 148 (239)
+.+ .|+++..++|+.+-.+.... ..... .....+.. ..+ ...+...+|+|+++++++.... ..|
T Consensus 162 a~e~~~~gi~v~~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~~~~p------~~r~~~pe~vA~~v~~l~s~~~~~~tG~ 234 (244)
T 1zmo_A 162 AKTLSRDGILLYAIGPNFFNNPTYFP-TSDWENNPELRERVDRDVP------LGRLGRPDEMGALITFLASRRAAPIVGQ 234 (244)
T ss_dssp HHHHGGGTEEEEEEEESSBCBTTTBC-HHHHHHCHHHHHHHHHHCT------TCSCBCHHHHHHHHHHHHTTTTGGGTTC
T ss_pred HHHHhhcCcEEEEEeeCCCcCCcccc-cccccchHHHHHHHhcCCC------CCCCcCHHHHHHHHHHHcCccccCccCC
Confidence 765 48999999999986553200 00000 11122221 111 1236789999999999887532 224
Q ss_pred eEEEec
Q 026418 149 RYLCAE 154 (239)
Q Consensus 149 ~y~~~~ 154 (239)
.+.+.|
T Consensus 235 ~i~vdg 240 (244)
T 1zmo_A 235 FFAFTG 240 (244)
T ss_dssp EEEEST
T ss_pred EEEeCC
Confidence 455544
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.36 E-value=5.1e-06 Score=64.47 Aligned_cols=125 Identities=16% Similarity=0.067 Sum_probs=81.3
Q ss_pred chhHhHHHHHHHHHHHhcC--CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~--v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++.++++++.+.- -.++|++||. +.+... .....|+.+|...+.+.+.++.
T Consensus 133 ~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~asKaa~~~l~~~la~ 191 (267)
T 3u5t_A 133 IAVNLKGTFNTLREAAQRLRVGGRIINMSTS-QVGLLH--------------------PSYGIYAAAKAGVEAMTHVLSK 191 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHEEEEEEEEEECCT-HHHHCC--------------------TTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCeEEEEeCh-hhccCC--------------------CCchHHHHHHHHHHHHHHHHHH
Confidence 5799999999999987642 2589999995 443211 1246799999999999999988
Q ss_pred Hc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-eEEEe
Q 026418 80 AR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYLCA 153 (239)
Q Consensus 80 ~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~ 153 (239)
+. |+++..+.||.+..+...... .......+....+ ...+...+|+|+++++++.... ..| ++++.
T Consensus 192 e~~~~gI~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~p------~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vd 263 (267)
T 3u5t_A 192 ELRGRDITVNAVAPGPTATDLFLEGK--SDEVRDRFAKLAP------LERLGTPQDIAGAVAFLAGPDGAWVNGQVLRAN 263 (267)
T ss_dssp HTTTSCCEEEEEEECCBC-------------CHHHHHTSST------TCSCBCHHHHHHHHHHHHSTTTTTCCSEEEEES
T ss_pred HhhhhCCEEEEEEECCCcCccccccC--CHHHHHHHHhcCC------CCCCcCHHHHHHHHHHHhCccccCccCCEEEeC
Confidence 74 799999999999765421100 0011122222211 2357789999999999886432 234 55655
Q ss_pred cC
Q 026418 154 ES 155 (239)
Q Consensus 154 ~~ 155 (239)
|.
T Consensus 264 GG 265 (267)
T 3u5t_A 264 GG 265 (267)
T ss_dssp SS
T ss_pred CC
Confidence 43
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=98.36 E-value=9.8e-06 Score=63.52 Aligned_cols=121 Identities=15% Similarity=0.054 Sum_probs=82.6
Q ss_pred chhHhHHHHHHHHHHHhcC----------CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK----------VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAE 71 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~----------v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E 71 (239)
+++|+.++..+++++...- ..++|++||. +.+... .+...|+.+|...+
T Consensus 144 ~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~asKaa~~ 202 (288)
T 2x9g_A 144 IGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDA-MVDQPC--------------------MAFSLYNMGKHALV 202 (288)
T ss_dssp HHHHTHHHHHHHHHHHHHC--------CCCEEEEEECCT-TTTSCC--------------------TTCHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEecc-cccCCC--------------------CCCchHHHHHHHHH
Confidence 5789999999999886532 3589999996 443211 13567999999999
Q ss_pred HHHHHHHHHc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCc-eehHHHHHHHHHhhcCC--C
Q 026418 72 KAAWEEAVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAY-VHVRDVALAHILVYETP--S 145 (239)
Q Consensus 72 ~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~v~D~a~~~~~~~~~~--~ 145 (239)
.+.+.++.+. |+++.+++|+.+.++. . .. ......+....+. ..+ ...+|+|+++++++... .
T Consensus 203 ~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~~---~~~~~~~~~~~p~------~r~~~~pedvA~~v~~l~s~~~~~ 271 (288)
T 2x9g_A 203 GLTQSAALELAPYGIRVNGVAPGVSLLPV-A-MG---EEEKDKWRRKVPL------GRREASAEQIADAVIFLVSGSAQY 271 (288)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-SC---HHHHHHHHHTCTT------TSSCCCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHhhccCeEEEEEEeccccCcc-c-cC---hHHHHHHHhhCCC------CCCCCCHHHHHHHHHHHhCccccC
Confidence 9988887663 8999999999999886 2 11 1222333322221 224 68999999999998642 2
Q ss_pred CCc-eEEEec
Q 026418 146 ASG-RYLCAE 154 (239)
Q Consensus 146 ~~~-~y~~~~ 154 (239)
..| ++++.|
T Consensus 272 itG~~i~vdG 281 (288)
T 2x9g_A 272 ITGSIIKVDG 281 (288)
T ss_dssp CCSCEEEEST
T ss_pred ccCCEEEECc
Confidence 234 555553
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=98.35 E-value=8.1e-07 Score=69.32 Aligned_cols=127 Identities=17% Similarity=0.049 Sum_probs=81.7
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.|+.++++++. +.+..++|++||. +.+.. ..+...|+.+|...+.+.+.+
T Consensus 137 ~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~-~~~~~--------------------~~~~~~Y~asKaa~~~l~~~l 195 (275)
T 4imr_A 137 LAVNLGSTVDMLQSALPKMVARKWGRVVSIGSI-NQLRP--------------------KSVVTAYAATKAAQHNLIQSQ 195 (275)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG-GGTSC--------------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCH-HhCCC--------------------CCCchhhHHHHHHHHHHHHHH
Confidence 6789999999999983 3456799999996 43321 123567999999999999988
Q ss_pred HHHc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eEE
Q 026418 78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYL 151 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y~ 151 (239)
+.+. |+++..++||.+..+..................... + ...+...+|+|+++++++... ...| +++
T Consensus 196 a~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~---p--~~r~~~pedvA~~v~fL~s~~a~~itG~~i~ 270 (275)
T 4imr_A 196 ARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLN---W--MGRAGRPEEMVGAALFLASEACSFMTGETIF 270 (275)
T ss_dssp HHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHS---T--TCSCBCGGGGHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcC---c--cCCCcCHHHHHHHHHHHcCcccCCCCCCEEE
Confidence 7764 899999999999765211000000011112221110 0 123567899999999988643 2234 566
Q ss_pred Eec
Q 026418 152 CAE 154 (239)
Q Consensus 152 ~~~ 154 (239)
+.|
T Consensus 271 vdG 273 (275)
T 4imr_A 271 LTG 273 (275)
T ss_dssp ESS
T ss_pred eCC
Confidence 553
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.35 E-value=1.5e-06 Score=67.36 Aligned_cols=122 Identities=20% Similarity=0.149 Sum_probs=84.6
Q ss_pred chhHhHHHHHHHHHHHhcC--CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~--v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++.++++++.+.- ..++|++||. +.++. .+...|+.+|...+.+.+.++.
T Consensus 108 ~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~-~~~~~---------------------~~~~~Y~asK~a~~~~~~~la~ 165 (263)
T 2a4k_A 108 LRVNLTGSFLVARKAGEVLEEGGSLVLTGSV-AGLGA---------------------FGLAHYAAGKLGVVGLARTLAL 165 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHCCTTCEEEEECCC-TTCCH---------------------HHHHHHHHCSSHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHhcCCEEEEEecc-hhcCC---------------------CCcHHHHHHHHHHHHHHHHHHH
Confidence 5789999999999997752 3589999996 54411 1246799999999988888776
Q ss_pred H---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eEEEe
Q 026418 80 A---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYLCA 153 (239)
Q Consensus 80 ~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y~~~ 153 (239)
+ .|+++.+++|+.+.++..... .......+....+ ...+.+.+|+|+++++++... ...| ++++.
T Consensus 166 e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~p------~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vd 236 (263)
T 2a4k_A 166 ELARKGVRVNVLLPGLIQTPMTAGL---PPWAWEQEVGASP------LGRAGRPEEVAQAALFLLSEESAYITGQALYVD 236 (263)
T ss_dssp HHTTTTCEEEEEEECSBCCGGGTTS---CHHHHHHHHHTST------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred HhhhhCcEEEEEEeCcCcCchhhhc---CHHHHHHHHhcCC------CCCCcCHHHHHHHHHHHhCccccCCcCCEEEEC
Confidence 5 489999999999988753321 1122222332222 124788999999999988643 2334 66665
Q ss_pred c
Q 026418 154 E 154 (239)
Q Consensus 154 ~ 154 (239)
|
T Consensus 237 g 237 (263)
T 2a4k_A 237 G 237 (263)
T ss_dssp T
T ss_pred C
Confidence 4
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=98.35 E-value=1.1e-05 Score=63.22 Aligned_cols=127 Identities=13% Similarity=0.124 Sum_probs=83.1
Q ss_pred chhHhHHHHHHHHHHHhc----C-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----K-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++.++++++... + -.++|++||. +.+... .....|+.+|...+.+.+.
T Consensus 133 ~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~asKaa~~~~~~~ 191 (286)
T 3uve_A 133 IDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSV-GGLKAY--------------------PHTGHYVAAKHGVVGLMRA 191 (286)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCG-GGTSCC--------------------TTCHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECch-hhccCC--------------------CCccHHHHHHHHHHHHHHH
Confidence 679999999999988543 2 3589999996 433111 1256799999999999988
Q ss_pred HHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHc---CCCC--------ccCCCCCCceehHHHHHHHHHhhc
Q 026418 77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLN---GSAK--------TYANSVQAYVHVRDVALAHILVYE 142 (239)
Q Consensus 77 ~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~---~~~~--------~~~~~~~~~i~v~D~a~~~~~~~~ 142 (239)
++.+ .|+++..++||.+..+..... ........ .... ........+.+.+|+|+++++++.
T Consensus 192 la~e~~~~gI~vn~v~PG~v~T~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~p~dvA~~v~fL~s 266 (286)
T 3uve_A 192 FGVELGQHMIRVNSVHPTHVKTPMLHNE-----GTFKMFRPDLENPGPDDMAPICQMFHTLPIPWVEPIDISNAVLFFAS 266 (286)
T ss_dssp HHHHHGGGTEEEEEEEESSBSSTTTSSH-----HHHHHHCTTSSSCCHHHHHHHHHTTCSSSCSCBCHHHHHHHHHHHHS
T ss_pred HHHHhcccCeEEEEEecCcccCCccccc-----chhhhccccccccchhhHHHHHHhhhccCCCcCCHHHHHHHHHHHcC
Confidence 8776 589999999999987753210 01111100 0000 000011457899999999999886
Q ss_pred CC--CCCc-eEEEec
Q 026418 143 TP--SASG-RYLCAE 154 (239)
Q Consensus 143 ~~--~~~~-~y~~~~ 154 (239)
.. ...| ++++.|
T Consensus 267 ~~a~~itG~~i~vdG 281 (286)
T 3uve_A 267 DEARYITGVTLPIDA 281 (286)
T ss_dssp GGGTTCCSCEEEEST
T ss_pred ccccCCcCCEEeECC
Confidence 43 2334 666653
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.34 E-value=2.8e-06 Score=66.24 Aligned_cols=131 Identities=15% Similarity=0.034 Sum_probs=83.4
Q ss_pred chhHhHHHHHHHHHHHh----cC-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++.++++++.. .+ -.++|++||. +.+... .....|+.+|...+.+.+.
T Consensus 129 ~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~asKaa~~~~~~~ 187 (277)
T 3tsc_A 129 MDINVTGTWNTVMAGAPRIIEGGRGGSIILISSA-AGMKMQ--------------------PFMIHYTASKHAVTGLARA 187 (277)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCG-GGTSCC--------------------SSCHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccH-hhCCCC--------------------CCchhhHHHHHHHHHHHHH
Confidence 67999999999988643 23 4689999996 433111 1246799999999999998
Q ss_pred HHHHc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCC--cc-CCCCCCceehHHHHHHHHHhhcCCC--CCc
Q 026418 77 EAVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAK--TY-ANSVQAYVHVRDVALAHILVYETPS--ASG 148 (239)
Q Consensus 77 ~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~i~v~D~a~~~~~~~~~~~--~~~ 148 (239)
++.+. |+++..++|+.+..+..... ............... .+ ......+.+.+|+|+++++++.... ..|
T Consensus 188 la~e~~~~gi~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~r~~~pedvA~~v~~L~s~~~~~itG 265 (277)
T 3tsc_A 188 FAAELGKHSIRVNSVHPGPVNTPMGSGD--MVTAVGQAMETNPQLSHVLTPFLPDWVAEPEDIADTVCWLASDESRKVTA 265 (277)
T ss_dssp HHHHHGGGTEEEEEEEESSBSSGGGSHH--HHHHHHHHHHTCGGGTTTTCCSSSCSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHhCccCeEEEEEEeCCCcCCcccch--hhhhhhhcccccHHHHHHhhhccCCCCCCHHHHHHHHHHHhCccccCCcC
Confidence 87763 79999999999987642210 000111111111110 01 1111248899999999999886432 334
Q ss_pred -eEEEecC
Q 026418 149 -RYLCAES 155 (239)
Q Consensus 149 -~y~~~~~ 155 (239)
++++.|.
T Consensus 266 ~~i~vdGG 273 (277)
T 3tsc_A 266 AQIPVDQG 273 (277)
T ss_dssp CEEEESTT
T ss_pred CEEeeCCC
Confidence 6666543
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.34 E-value=2.5e-06 Score=66.76 Aligned_cols=117 Identities=12% Similarity=0.076 Sum_probs=77.7
Q ss_pred chhHhHHHHHHHHHHHhc----C--CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----K--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAW 75 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----~--v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~ 75 (239)
+++|+.++.++.+++.+. + -.++|++||.++..+. .+...|+.+|...+.+.+
T Consensus 140 ~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~---------------------~~~~~Y~asKaa~~~l~~ 198 (281)
T 4dry_A 140 VAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPR---------------------PNSAPYTATKHAITGLTK 198 (281)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCC---------------------TTCHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCC---------------------CCChhHHHHHHHHHHHHH
Confidence 678999988888777542 2 3689999996333211 235779999999999998
Q ss_pred HHHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCC-CCCCceehHHHHHHHHHhhcCCCCCceE
Q 026418 76 EEAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYAN-SVQAYVHVRDVALAHILVYETPSASGRY 150 (239)
Q Consensus 76 ~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~v~D~a~~~~~~~~~~~~~~~y 150 (239)
.++.+ .|+++..++||.+..+... .+.......... ....++..+|+|+++++++..+....+.
T Consensus 199 ~la~e~~~~gI~vn~v~PG~v~T~~~~-----------~~~~~~~~~~~~~~~~~~~~pedvA~~v~fL~s~~~~~~i~ 266 (281)
T 4dry_A 199 STALDGRMHDIACGQIDIGNAATDMTA-----------RMSTGVLQANGEVAAEPTIPIEHIAEAVVYMASLPLSANVL 266 (281)
T ss_dssp HHHHHHGGGTEEEEEEEEECBCC------------------CEEECTTSCEEECCCBCHHHHHHHHHHHHHSCTTEEEE
T ss_pred HHHHHhcccCeEEEEEEECcCcChhhh-----------hhcchhhhhhhcccccCCCCHHHHHHHHHHHhCCCccCccc
Confidence 88765 5899999999999765311 111110000111 1123788999999999999877655444
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=98.34 E-value=2.1e-06 Score=67.31 Aligned_cols=106 Identities=16% Similarity=0.005 Sum_probs=75.5
Q ss_pred chhHhHHHHHHHHHHHhc---CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA---KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA 78 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~---~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~ 78 (239)
+++|+.|+.++++++... +..++|++||. +.+... .+...|+.+|...+.+++.++
T Consensus 134 ~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~asK~a~~~~~~~l~ 192 (286)
T 1xu9_A 134 MEVNFLSYVVLTVAALPMLKQSNGSIVVVSSL-AGKVAY--------------------PMVAAYSASKFALDGFFSSIR 192 (286)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEG-GGTSCC--------------------TTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHHHHHHHCCCEEEEECCc-ccccCC--------------------CCccHHHHHHHHHHHHHHHHH
Confidence 578999999999988543 23699999996 433211 135679999999999998876
Q ss_pred HHc-----CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC
Q 026418 79 VAR-----GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS 145 (239)
Q Consensus 79 ~~~-----~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 145 (239)
.+. ++++++++||.+..+. ......+ ......++.+|+|+.++.++..+.
T Consensus 193 ~e~~~~~~~i~v~~v~Pg~v~t~~-----------~~~~~~~------~~~~~~~~~~~vA~~i~~~~~~~~ 247 (286)
T 1xu9_A 193 KEYSVSRVNVSITLCVLGLIDTET-----------AMKAVSG------IVHMQAAPKEECALEIIKGGALRQ 247 (286)
T ss_dssp HHHHHHTCCCEEEEEEECCBCCHH-----------HHHHSCG------GGGGGCBCHHHHHHHHHHHHHTTC
T ss_pred HHHhhcCCCeEEEEeecCccCChh-----------HHHhccc------cccCCCCCHHHHHHHHHHHHhcCC
Confidence 654 8999999999986431 1111111 112346889999999999987653
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.34 E-value=4e-06 Score=63.76 Aligned_cols=102 Identities=12% Similarity=0.070 Sum_probs=73.3
Q ss_pred chhHhHHHHHHHHHHHhcC--CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~--v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++.++++++.+.- -.++|++||. +.+... .+...|+.+|...+.+.+.++.
T Consensus 101 ~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~~sK~a~~~~~~~la~ 159 (236)
T 1ooe_A 101 IKQSVWSSAIAAKLATTHLKPGGLLQLTGAA-AAMGPT--------------------PSMIGYGMAKAAVHHLTSSLAA 159 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHEEEEEEEEEECCG-GGGSCC--------------------TTBHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHhHHHHHHHHHHHHHhccCCEEEEECch-hhccCC--------------------CCcHHHHHHHHHHHHHHHHHHH
Confidence 5789999999999998742 2589999996 443110 1356799999999999999887
Q ss_pred Hc-----CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhh
Q 026418 80 AR-----GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVY 141 (239)
Q Consensus 80 ~~-----~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~ 141 (239)
+. |+++.+++|+.+.++. ........ ....++..+|+|++++.++
T Consensus 160 e~~~~~~gi~v~~v~Pg~v~t~~-----------~~~~~~~~------~~~~~~~~~dvA~~i~~~l 209 (236)
T 1ooe_A 160 KDSGLPDNSAVLTIMPVTLDTPM-----------NRKWMPNA------DHSSWTPLSFISEHLLKWT 209 (236)
T ss_dssp TTSSCCTTCEEEEEEESCBCCHH-----------HHHHSTTC------CGGGCBCHHHHHHHHHHHH
T ss_pred HhcccCCCeEEEEEecCcccCcc-----------hhhcCCCc------cccccCCHHHHHHHHHHHH
Confidence 65 4999999999997652 11111111 1123567899999998666
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=98.30 E-value=2.2e-06 Score=66.47 Aligned_cols=128 Identities=11% Similarity=-0.035 Sum_probs=82.0
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++.. .+..++|++||.++..+. .....|+.+|...+.+.+.+
T Consensus 115 ~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asKaa~~~l~~~l 173 (265)
T 3lf2_A 115 LQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPE---------------------PHMVATSAARAGVKNLVRSM 173 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCC---------------------TTBHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCC---------------------CCchhhHHHHHHHHHHHHHH
Confidence 67899999999999854 335689999996333211 12577999999999999888
Q ss_pred HHHc---CccEEEEecCcccCCCCCCC------CChhHHHHHHHHc-CCCCccCCCCCCceehHHHHHHHHHhhcCC--C
Q 026418 78 AVAR---GVDLVVVNPVLVLGPLLQST------VNASIIHILKYLN-GSAKTYANSVQAYVHVRDVALAHILVYETP--S 145 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~~~~~------~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~ 145 (239)
+.+. |+++..++||.+..+..... .......+..... ... .....+...+|+|+++++++... .
T Consensus 174 a~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~p~~r~~~pedvA~~v~fL~s~~~~~ 249 (265)
T 3lf2_A 174 AFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQ----IPLGRLGKPIEAARAILFLASPLSAY 249 (265)
T ss_dssp HHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTT----CTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccC----CCcCCCcCHHHHHHHHHHHhCchhcC
Confidence 7764 89999999999976521100 0000011111111 100 11234778999999999988643 2
Q ss_pred CCc-eEEEec
Q 026418 146 ASG-RYLCAE 154 (239)
Q Consensus 146 ~~~-~y~~~~ 154 (239)
..| ++++.|
T Consensus 250 itG~~i~vdG 259 (265)
T 3lf2_A 250 TTGSHIDVSG 259 (265)
T ss_dssp CCSEEEEESS
T ss_pred cCCCEEEECC
Confidence 334 666653
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=98.27 E-value=1.3e-05 Score=62.84 Aligned_cols=109 Identities=17% Similarity=0.031 Sum_probs=77.2
Q ss_pred chhHhHHHHHHHHHHHhc----CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++... +..++|++||.++..+.. .+...|+.+|...+.+.+.+
T Consensus 121 ~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~--------------------~~~~~Y~asKaal~~~~~~l 180 (285)
T 3sc4_A 121 NGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKW--------------------LRPTPYMMAKYGMTLCALGI 180 (285)
T ss_dssp HHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGG--------------------SCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCC--------------------CCCchHHHHHHHHHHHHHHH
Confidence 579999999999998664 457999999963222110 12477999999999999988
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS 145 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 145 (239)
+.+ .|+++..++|+.+... .+.........+ ...+...+|+|+++++++....
T Consensus 181 a~e~~~~gI~vn~v~PG~~v~t----------~~~~~~~~~~~~-----~~r~~~pedvA~~~~~l~s~~~ 236 (285)
T 3sc4_A 181 AEELRDAGIASNTLWPRTTVAT----------AAVQNLLGGDEA-----MARSRKPEVYADAAYVVLNKPS 236 (285)
T ss_dssp HHHTGGGTCEEEEEECSSCBCC----------HHHHHHHTSCCC-----CTTCBCTHHHHHHHHHHHTSCT
T ss_pred HHHhcccCcEEEEEeCCCcccc----------HHHHhhcccccc-----ccCCCCHHHHHHHHHHHhCCcc
Confidence 876 5899999999854321 123333332221 2346788999999999997653
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=98.26 E-value=8.2e-06 Score=65.00 Aligned_cols=114 Identities=15% Similarity=0.131 Sum_probs=79.4
Q ss_pred chhHhHHHHHHHHHH----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.|+.++++++ ++.+..++|++||.++.++.. +...|+.+|...+.+.+.+
T Consensus 120 ~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~---------------------~~~~Y~aSK~a~~~~~~~l 178 (319)
T 1gz6_A 120 QRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNF---------------------GQANYSAAKLGLLGLANTL 178 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT---------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCC---------------------CCHHHHHHHHHHHHHHHHH
Confidence 578999999988887 345568999999975666421 2467999999999999988
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC-CCc-eEEE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS-ASG-RYLC 152 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~-~~~-~y~~ 152 (239)
+++ .|+++..++|+.+ .+... .. .. . ....++..+|+|.++++++..+. ..| +|++
T Consensus 179 a~el~~~gI~vn~v~PG~~-t~~~~-~~-~~-~---------------~~~~~~~p~dvA~~~~~l~s~~~~~tG~~~~v 239 (319)
T 1gz6_A 179 VIEGRKNNIHCNTIAPNAG-SRMTE-TV-MP-E---------------DLVEALKPEYVAPLVLWLCHESCEENGGLFEV 239 (319)
T ss_dssp HHHTGGGTEEEEEEEEECC-STTTG-GG-SC-H---------------HHHHHSCGGGTHHHHHHHTSTTCCCCSCEEEE
T ss_pred HHHhcccCEEEEEEeCCCc-ccccc-cc-CC-h---------------hhhccCCHHHHHHHHHHHhCchhhcCCCEEEE
Confidence 776 4899999999987 22110 00 00 0 01124578999999999886542 234 6666
Q ss_pred ecC
Q 026418 153 AES 155 (239)
Q Consensus 153 ~~~ 155 (239)
.|.
T Consensus 240 ~GG 242 (319)
T 1gz6_A 240 GAG 242 (319)
T ss_dssp ETT
T ss_pred CCC
Confidence 543
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=98.25 E-value=3.4e-06 Score=71.46 Aligned_cols=129 Identities=12% Similarity=-0.004 Sum_probs=90.6
Q ss_pred chhHhHHHHHHHHHHHhc-CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA-KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA 80 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~-~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 80 (239)
+++|+.|+.++.+++.+. +..+||++||.++++|.. ....|+.+|...+.+.+.+ +.
T Consensus 363 ~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~---------------------g~~~YaaaKa~ld~la~~~-~~ 420 (511)
T 2z5l_A 363 RGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNA---------------------GQGAYAAANAALDALAERR-RA 420 (511)
T ss_dssp HHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCT---------------------TBHHHHHHHHHHHHHHHHH-HT
T ss_pred HHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCC---------------------CCHHHHHHHHHHHHHHHHH-HH
Confidence 578999999999999877 688999999976666532 2467999999999999876 45
Q ss_pred cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCceEEEecCCCCHH
Q 026418 81 RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRG 160 (239)
Q Consensus 81 ~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~~~~~s~~ 160 (239)
.|+++++++|+.+-+.++... .. ...+.+ .....++.+|+++++..++..... .+.+. .+.|.
T Consensus 421 ~gi~v~sv~pG~~~~tgm~~~--~~---~~~~~~--------~g~~~l~~e~~a~~l~~al~~~~~--~v~v~--~~d~~ 483 (511)
T 2z5l_A 421 AGLPATSVAWGLWGGGGMAAG--AG---EESLSR--------RGLRAMDPDAAVDALLGAMGRNDV--CVTVV--DVDWE 483 (511)
T ss_dssp TTCCCEEEEECCBCSTTCCCC--HH---HHHHHH--------HTBCCBCHHHHHHHHHHHHHHTCS--EEEEC--CBCHH
T ss_pred cCCcEEEEECCcccCCccccc--cc---HHHHHh--------cCCCCCCHHHHHHHHHHHHhCCCC--EEEEE--eCCHH
Confidence 699999999998844333221 11 111111 123568899999999999975432 22222 35677
Q ss_pred HHHHHHHHh
Q 026418 161 EVVEILAKF 169 (239)
Q Consensus 161 el~~~i~~~ 169 (239)
.+...+...
T Consensus 484 ~~~~~~~~~ 492 (511)
T 2z5l_A 484 RFAPATNAI 492 (511)
T ss_dssp HHHHHHHHH
T ss_pred HHHhhhccc
Confidence 777666544
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.23 E-value=4e-06 Score=63.78 Aligned_cols=106 Identities=15% Similarity=0.082 Sum_probs=73.8
Q ss_pred chhHhHHHHHHHHHHHhc---CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA---KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA 78 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~---~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~ 78 (239)
+++|+.|+.++++++... .-.++|++||.++.++. .....|+.+|...+.+.+.++
T Consensus 105 ~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~---------------------~~~~~Y~asKaa~~~~~~~la 163 (235)
T 3l6e_A 105 MESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVGK---------------------ANESLYCASKWGMRGFLESLR 163 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSSC---------------------SSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCCC---------------------CCCcHHHHHHHHHHHHHHHHH
Confidence 678999999999988542 11389999996333321 124679999999999999988
Q ss_pred HH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCC
Q 026418 79 VA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSA 146 (239)
Q Consensus 79 ~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~ 146 (239)
.+ .|+++..++||.+-.+..... . . . ....+...+|+|++++.++..+..
T Consensus 164 ~e~~~~gi~v~~v~PG~v~T~~~~~~--------~---~-~------~~~~~~~pedvA~~v~~l~~~~~~ 216 (235)
T 3l6e_A 164 AELKDSPLRLVNLYPSGIRSEFWDNT--------D---H-V------DPSGFMTPEDAAAYMLDALEARSS 216 (235)
T ss_dssp HHTTTSSEEEEEEEEEEECCCC-----------------------------CBCHHHHHHHHHHHTCCCSS
T ss_pred HHhhccCCEEEEEeCCCccCcchhcc--------C---C-C------CCcCCCCHHHHHHHHHHHHhCCCC
Confidence 75 378999999999865532110 0 0 0 012578899999999999975543
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=98.20 E-value=1.2e-05 Score=61.03 Aligned_cols=107 Identities=16% Similarity=0.096 Sum_probs=74.5
Q ss_pred chhHhHHHHHHHHHHHhc---CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA---KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA 78 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~---~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~ 78 (239)
+++|+.++.++++++... +..++|++||..+.++. .....|+.+|...+.+.+.+.
T Consensus 108 ~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~---------------------~~~~~Y~~sKaa~~~~~~~l~ 166 (235)
T 3l77_A 108 IEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLI---------------------PYGGGYVSTKWAARALVRTFQ 166 (235)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCC---------------------TTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccC---------------------CCcchHHHHHHHHHHHHHHHh
Confidence 679999999999998642 23567777774333321 124679999999999998874
Q ss_pred HH-cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCC
Q 026418 79 VA-RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSA 146 (239)
Q Consensus 79 ~~-~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~ 146 (239)
.. .++++..++||.+-.+...... .. .....++..+|+|+++++++..+..
T Consensus 167 ~~~~~i~v~~v~PG~v~T~~~~~~~------------~~-----~~~~~~~~p~dva~~v~~l~~~~~~ 218 (235)
T 3l77_A 167 IENPDVRFFELRPGAVDTYFGGSKP------------GK-----PKEKGYLKPDEIAEAVRCLLKLPKD 218 (235)
T ss_dssp HHCTTSEEEEEEECSBSSSTTTCCS------------CC-----CGGGTCBCHHHHHHHHHHHHTSCTT
T ss_pred hcCCCeEEEEEeCCccccccccccC------------Cc-----ccccCCCCHHHHHHHHHHHHcCCCC
Confidence 43 4899999999999654321110 00 0112578899999999999987643
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.20 E-value=7.2e-06 Score=62.70 Aligned_cols=104 Identities=14% Similarity=-0.026 Sum_probs=74.2
Q ss_pred chhHhHHHHHHHHHH----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++ ++.+..++|++||..+..+. .+...|+.+|...+.+.+.+
T Consensus 123 ~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~l 181 (247)
T 3i1j_A 123 MHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGR---------------------ANWGAYGVSKFATEGLMQTL 181 (247)
T ss_dssp HHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCC---------------------CCcchhHHHHHHHHHHHHHH
Confidence 578999999999998 44456799999996332211 13567999999999999988
Q ss_pred HHH----cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 78 AVA----RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 78 ~~~----~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
+.+ .++++..++||.+..+ +......... ...+...+|+|+++++++..
T Consensus 182 a~e~~~~~~i~v~~v~PG~v~t~-----------~~~~~~~~~~------~~~~~~p~dva~~~~~l~s~ 234 (247)
T 3i1j_A 182 ADELEGVTAVRANSINPGATRTG-----------MRAQAYPDEN------PLNNPAPEDIMPVYLYLMGP 234 (247)
T ss_dssp HHHHTTTSSEEEEEEECCCCSSH-----------HHHHHSTTSC------GGGSCCGGGGTHHHHHHHSG
T ss_pred HHHhcCCCCeEEEEEecCcccCc-----------cchhcccccC------ccCCCCHHHHHHHHHHHhCc
Confidence 776 3688999999988543 1122211111 12356789999999998863
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=98.17 E-value=1.9e-05 Score=61.72 Aligned_cols=126 Identities=16% Similarity=0.017 Sum_probs=80.5
Q ss_pred chhHhHHHHHHHHHHHhcC---CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK---VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA 78 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~---v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~ 78 (239)
+++|+.++.++++++...- -.++|++||.++.++. .....|+.+|...+.+.+.++
T Consensus 112 ~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asKaa~~~l~~~la 170 (281)
T 3zv4_A 112 FHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPN---------------------GGGPLYTATKHAVVGLVRQMA 170 (281)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSS---------------------SSCHHHHHHHHHHHHHHHHHH
T ss_pred HhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCC---------------------CCCchhHHHHHHHHHHHHHHH
Confidence 5689999999999885431 2589999996333211 124679999999999999988
Q ss_pred HHcC--ccEEEEecCcccCCCCCCCCChhH-------HHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC---C
Q 026418 79 VARG--VDLVVVNPVLVLGPLLQSTVNASI-------IHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS---A 146 (239)
Q Consensus 79 ~~~~--~~~~i~Rp~~v~G~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~ 146 (239)
.+.+ +++..+.||.+..+.......... .....+....+ ...+...+|+|+++++++..+. .
T Consensus 171 ~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p------~~r~~~pedvA~~v~fL~s~~~~~~i 244 (281)
T 3zv4_A 171 FELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLP------IGRMPALEEYTGAYVFFATRGDSLPA 244 (281)
T ss_dssp HHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCT------TSSCCCGGGGSHHHHHHHSTTTSTTC
T ss_pred HHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCC------CCCCCCHHHHHHHHHHhhcccccccc
Confidence 7643 889999999997764321100000 01111111111 2347789999999999987332 3
Q ss_pred Cc-eEEEec
Q 026418 147 SG-RYLCAE 154 (239)
Q Consensus 147 ~~-~y~~~~ 154 (239)
.| ++++.|
T Consensus 245 tG~~i~vdG 253 (281)
T 3zv4_A 245 TGALLNYDG 253 (281)
T ss_dssp SSCEEEESS
T ss_pred cCcEEEECC
Confidence 34 666654
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=98.16 E-value=4.7e-06 Score=64.49 Aligned_cols=127 Identities=9% Similarity=-0.045 Sum_probs=77.7
Q ss_pred chhHhHHHHHHHHHHHhc--CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~--~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++.++++++... +-.++|++||. +.+... .....|+.+|...+.+.+.++.
T Consensus 119 ~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~asKaa~~~l~~~la~ 177 (262)
T 3ksu_A 119 DTINNKVAYFFIKQAAKHMNPNGHIITIATS-LLAAYT--------------------GFYSTYAGNKAPVEHYTRAASK 177 (262)
T ss_dssp HHHHHHHHHHHHHHHHTTEEEEEEEEEECCC-HHHHHH--------------------CCCCC-----CHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHhhcCCCEEEEEech-hhccCC--------------------CCCchhHHHHHHHHHHHHHHHH
Confidence 579999999999999875 34689999996 444221 1245699999999999999987
Q ss_pred Hc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC-CCCc-eEEEec
Q 026418 80 AR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP-SASG-RYLCAE 154 (239)
Q Consensus 80 ~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~-~~~~-~y~~~~ 154 (239)
+. |+++..+.||.+..+....... ......... ......+...+|+|+++++++... ...| ++++.|
T Consensus 178 e~~~~gi~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~------~~~~~r~~~pedvA~~v~~L~s~~~~itG~~i~vdG 249 (262)
T 3ksu_A 178 ELMKQQISVNAIAPGPMDTSFFYGQET--KESTAFHKS------QAMGNQLTKIEDIAPIIKFLTTDGWWINGQTIFANG 249 (262)
T ss_dssp HTTTTTCEEEEEEECCCCTHHHHTCC--------------------CCCCSCCGGGTHHHHHHHHTTTTTCCSCEEEEST
T ss_pred HHHHcCcEEEEEeeCCCcCccccccCc--hHHHHHHHh------cCcccCCCCHHHHHHHHHHHcCCCCCccCCEEEECC
Confidence 75 7999999999986532100000 000000000 011234778999999999988752 2234 666665
Q ss_pred CCC
Q 026418 155 SVL 157 (239)
Q Consensus 155 ~~~ 157 (239)
...
T Consensus 250 g~~ 252 (262)
T 3ksu_A 250 GYT 252 (262)
T ss_dssp TCC
T ss_pred Ccc
Confidence 443
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=98.12 E-value=3.2e-05 Score=64.56 Aligned_cols=123 Identities=15% Similarity=0.076 Sum_probs=80.0
Q ss_pred chhHhHHHHHHHHHHHhc----CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.|+.++.+++... +..+||++||.+++.+.. ....|+.+|...+.+.+.+
T Consensus 316 ~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~---------------------g~~~YaasKaal~~l~~~l 374 (454)
T 3u0b_A 316 IAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNR---------------------GQTNYATTKAGMIGLAEAL 374 (454)
T ss_dssp HHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCT---------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCC---------------------CCHHHHHHHHHHHHHHHHH
Confidence 679999999999999876 567999999975555321 2567999999888877777
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eEE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYL 151 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y~ 151 (239)
+.+ .|+++..+.|+.+..+...... .......... .....+...+|+|+++.+++... ...| +++
T Consensus 375 a~e~~~~gI~vn~v~PG~v~T~~~~~~~----~~~~~~~~~~-----~~l~r~g~pedvA~~v~fL~s~~a~~itG~~i~ 445 (454)
T 3u0b_A 375 APVLADKGITINAVAPGFIETKMTEAIP----LATREVGRRL-----NSLFQGGQPVDVAELIAYFASPASNAVTGNTIR 445 (454)
T ss_dssp HHHHHTTTCEEEEEEECSBCC--------------CHHHHHS-----BTTSSCBCHHHHHHHHHHHHCGGGTTCCSCEEE
T ss_pred HHHhhhcCcEEEEEEcCcccChhhhhcc----hhhHHHHHhh-----ccccCCCCHHHHHHHHHHHhCCccCCCCCcEEE
Confidence 654 4899999999999765322100 0000111100 01123467899999999988633 2234 555
Q ss_pred Eec
Q 026418 152 CAE 154 (239)
Q Consensus 152 ~~~ 154 (239)
+.|
T Consensus 446 vdG 448 (454)
T 3u0b_A 446 VCG 448 (454)
T ss_dssp ESS
T ss_pred ECC
Confidence 554
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.11 E-value=1.9e-05 Score=63.57 Aligned_cols=117 Identities=15% Similarity=0.071 Sum_probs=78.7
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++. +.+..++|++||. ..+.... ..+...|+.+|...+.+.+.+
T Consensus 157 ~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~-~~~~~~~------------------~~~~~~Y~aSKaal~~l~~~l 217 (346)
T 3kvo_A 157 MNVNTRGTYLASKACIPYLKKSKVAHILNISPP-LNLNPVW------------------FKQHCAYTIAKYGMSMYVLGM 217 (346)
T ss_dssp HHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCC-CCCCGGG------------------TSSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCH-HHcCCCC------------------CCCchHHHHHHHHHHHHHHHH
Confidence 6899999999999984 3456799999996 4331100 023577999999999999998
Q ss_pred HHHc--CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC-CCceEEEe
Q 026418 78 AVAR--GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS-ASGRYLCA 153 (239)
Q Consensus 78 ~~~~--~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~-~~~~y~~~ 153 (239)
+.+. ++++..+.|+.++.. .... .+.+..+ ...+...+|+|+++++++.... ..|.+.+.
T Consensus 218 a~e~~~gIrvn~v~PG~~i~T----------~~~~-~~~~~~~-----~~r~~~pedvA~~v~~L~s~~~~itG~~ivd 280 (346)
T 3kvo_A 218 AEEFKGEIAVNALWPKTAIHT----------AAMD-MLGGPGI-----ESQCRKVDIIADAAYSIFQKPKSFTGNFVID 280 (346)
T ss_dssp HHHTTTTCEEEEEECSBCBCC----------HHHH-HHCC--C-----GGGCBCTHHHHHHHHHHHTSCTTCCSCEEEH
T ss_pred HHHhcCCcEEEEEeCCCcccc----------HHHH-hhccccc-----cccCCCHHHHHHHHHHHHhcCCCCCceEEEC
Confidence 8774 789999999964432 1122 2222211 2236678999999999997632 23444343
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=98.10 E-value=2.2e-05 Score=59.81 Aligned_cols=114 Identities=11% Similarity=0.015 Sum_probs=78.4
Q ss_pred chhHhHHHHHHHHHHHhcC--CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~--v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++.++++++.+.- -.++|++||. +.+... .+...|+.+|...+.+.+.++.
T Consensus 105 ~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~asK~a~~~~~~~la~ 163 (241)
T 1dhr_A 105 WKQSIWTSTISSHLATKHLKEGGLLTLAGAK-AALDGT--------------------PGMIGYGMAKGAVHQLCQSLAG 163 (241)
T ss_dssp HHHHHHHHHHHHHHHHHHEEEEEEEEEECCG-GGGSCC--------------------TTBHHHHHHHHHHHHHHHHHTS
T ss_pred HHHhhHHHHHHHHHHHHhhccCCEEEEECCH-HHccCC--------------------CCchHHHHHHHHHHHHHHHHHH
Confidence 5789999999999997641 2589999996 444211 1256799999999999999876
Q ss_pred Hc-----CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CCc-eEE
Q 026418 80 AR-----GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL 151 (239)
Q Consensus 80 ~~-----~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~ 151 (239)
+. |+++..++|+.+-.+. ........ ....++..+|+|++++.++.... ..| .+.
T Consensus 164 e~~~~~~gi~v~~v~PG~v~T~~-----------~~~~~~~~------~~~~~~~~~~vA~~v~~l~~~~~~~~~G~~~~ 226 (241)
T 1dhr_A 164 KNSGMPSGAAAIAVLPVTLDTPM-----------NRKSMPEA------DFSSWTPLEFLVETFHDWITGNKRPNSGSLIQ 226 (241)
T ss_dssp TTSSCCTTCEEEEEEESCEECHH-----------HHHHSTTS------CGGGSEEHHHHHHHHHHHHTTTTCCCTTCEEE
T ss_pred HhccCCCCeEEEEEecCcccCcc-----------ccccCcch------hhccCCCHHHHHHHHHHHhcCCCcCccceEEE
Confidence 53 5999999999885431 11111111 11235778999999999886542 234 554
Q ss_pred Ee
Q 026418 152 CA 153 (239)
Q Consensus 152 ~~ 153 (239)
+.
T Consensus 227 v~ 228 (241)
T 1dhr_A 227 VV 228 (241)
T ss_dssp EE
T ss_pred Ee
Confidence 43
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=98.08 E-value=4.4e-05 Score=59.93 Aligned_cols=122 Identities=12% Similarity=-0.025 Sum_probs=82.0
Q ss_pred chhHhHHHHHHHHHHHh----cC------CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AK------VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAE 71 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~------v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E 71 (239)
+++|+.++.++++++.. .+ ..++|++||. ..+... .....|+.+|...+
T Consensus 147 ~~~N~~g~~~l~~~~~~~m~~~~~~~~~~~g~Iv~isS~-~~~~~~--------------------~~~~~Y~asKaa~~ 205 (291)
T 1e7w_A 147 FGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDA-MTNQPL--------------------LGYTIYTMAKGALE 205 (291)
T ss_dssp HHHHTHHHHHHHHHHHHHHHTSCGGGSCSCEEEEEECCT-TTTSCC--------------------TTCHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCCCCCCCCcEEEEEech-hhcCCC--------------------CCCchhHHHHHHHH
Confidence 57899999999998863 34 4789999996 433211 12567999999999
Q ss_pred HHHHHHHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CC
Q 026418 72 KAAWEEAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SA 146 (239)
Q Consensus 72 ~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~ 146 (239)
.+.+.++.+ .|+++..++|+.+..+. . .. ......+....+. + ..+...+|+|+++++++... ..
T Consensus 206 ~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~--~~--~~~~~~~~~~~p~--~---~r~~~pedvA~~v~~l~s~~~~~i 275 (291)
T 1e7w_A 206 GLTRSAALELAPLQIRVNGVGPGLSVLVD-D--MP--PAVWEGHRSKVPL--Y---QRDSSAAEVSDVVIFLCSSKAKYI 275 (291)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEESSBCCGG-G--SC--HHHHHHHHTTCTT--T---TSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHhcCeEEEEEeeCCccCCc-c--CC--HHHHHHHHhhCCC--C---CCCCCHHHHHHHHHHHhCCcccCc
Confidence 999888765 48999999999986654 1 11 2222333322211 1 13678999999999988642 22
Q ss_pred Cc-eEEEec
Q 026418 147 SG-RYLCAE 154 (239)
Q Consensus 147 ~~-~y~~~~ 154 (239)
.| ++.+.|
T Consensus 276 tG~~i~vdG 284 (291)
T 1e7w_A 276 TGTCVKVDG 284 (291)
T ss_dssp CSCEEEEST
T ss_pred cCcEEEECC
Confidence 34 555553
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.05 E-value=2.4e-05 Score=60.36 Aligned_cols=117 Identities=20% Similarity=0.110 Sum_probs=72.1
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++.+++. +.+..++|++||. +.+.. .+...|+.+|...+.+.+.+
T Consensus 118 ~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~-~~~~~---------------------~~~~~Y~asK~a~~~~~~~l 175 (260)
T 2qq5_A 118 NNVGLRGHYFCSVYGARLMVPAGQGLIVVISSP-GSLQY---------------------MFNVPYGVGKAACDKLAADC 175 (260)
T ss_dssp HTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCG-GGTSC---------------------CSSHHHHHHHHHHHHHHHHH
T ss_pred HhhcchhHHHHHHHHHHHHhhcCCcEEEEEcCh-hhcCC---------------------CCCCchHHHHHHHHHHHHHH
Confidence 4678888877776664 4556799999996 44311 12467999999999999888
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
+.+ .|+++.+++||.+..+................... .......+...+|+|+++++++...
T Consensus 176 a~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~pe~va~~v~~l~s~~ 241 (260)
T 2qq5_A 176 AHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQ----FKSAFSSAETTELSGKCVVALATDP 241 (260)
T ss_dssp HHHHGGGTCEEEEEECCCSCTTTC--------------------------CHHHHHHHHHHHHHHHHTCT
T ss_pred HHHhccCCeEEEEEecCccccHHHHHhhccccccchhHHHH----HHhhhccCCCHHHHHHHHHHHhcCc
Confidence 764 48999999999997764221100000000000000 0000011457899999999988754
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.93 E-value=2.4e-05 Score=60.40 Aligned_cols=115 Identities=12% Similarity=0.121 Sum_probs=75.0
Q ss_pred chhHhHHHHHHHHHHHhc----CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++.+. +..++|++||.++.++. .....|+.+|...+.+.+.+
T Consensus 113 ~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asK~a~~~~~~~l 171 (262)
T 1zem_A 113 LTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGP---------------------PNMAAYGTSKGAIIALTETA 171 (262)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCC---------------------TTBHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC---------------------CCCchHHHHHHHHHHHHHHH
Confidence 578999999999887653 46799999996443321 12467999999999888887
Q ss_pred HHH---cCccEEEEecCcccCCCCCCC------------CChhHH-HHHHHHcCCCCccCCCCCCceehHHHHHHHHHhh
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQST------------VNASII-HILKYLNGSAKTYANSVQAYVHVRDVALAHILVY 141 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~------------~~~~~~-~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~ 141 (239)
+.+ .|+++..++|+.+..+..... ...... ....+....+ ...+...+|+|+++++++
T Consensus 172 a~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p------~~r~~~p~dvA~~v~~l~ 245 (262)
T 1zem_A 172 ALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVP------MRRYGDINEIPGVVAFLL 245 (262)
T ss_dssp HHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTST------TSSCBCGGGSHHHHHHHH
T ss_pred HHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCC------CCCCcCHHHHHHHHHHHc
Confidence 654 489999999998865421000 000000 1111111111 123678899999999988
Q ss_pred cC
Q 026418 142 ET 143 (239)
Q Consensus 142 ~~ 143 (239)
..
T Consensus 246 s~ 247 (262)
T 1zem_A 246 GD 247 (262)
T ss_dssp SG
T ss_pred Cc
Confidence 64
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.90 E-value=0.00015 Score=57.04 Aligned_cols=119 Identities=15% Similarity=0.012 Sum_probs=74.5
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCC--CccccCCCC--------------------CChhh
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSP--DDVVDESCW--------------------SDLEF 55 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~--~~~~~E~~~--------------------~~~~~ 55 (239)
+++|+.|+.++++++.. .+..++|++||.++.++...... ....+++.+ .....
T Consensus 149 ~~~N~~g~~~l~~~~~~~l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (311)
T 3o26_A 149 LKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNG 228 (311)
T ss_dssp HHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTT
T ss_pred eeeeeehHHHHHHHhhHhhccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhcccccccc
Confidence 57899999998888753 34579999999754443211100 000000000 00000
Q ss_pred cccCCchHHHHHHHHHHHHHHHHHHc-CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHH
Q 026418 56 CKNTKNWYCYGKAVAEKAAWEEAVAR-GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVA 134 (239)
Q Consensus 56 ~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a 134 (239)
...+...|+.||.+.+.+.+.++++. ++++..+.||.|..+.... ......++.+
T Consensus 229 ~~~~~~~Y~~SK~a~~~~~~~la~e~~~i~v~~v~PG~v~T~~~~~------------------------~~~~~~~~~a 284 (311)
T 3o26_A 229 WPSFGAAYTTSKACLNAYTRVLANKIPKFQVNCVCPGLVKTEMNYG------------------------IGNYTAEEGA 284 (311)
T ss_dssp CCSSCHHHHHHHHHHHHHHHHHHHHCTTSEEEEECCCSBCSGGGTT------------------------CCSBCHHHHH
T ss_pred CcccchhhHHHHHHHHHHHHHHHhhcCCceEEEecCCceecCCcCC------------------------CCCCCHHHHH
Confidence 01234679999999999999998875 6899999999996542111 0124578888
Q ss_pred HHHHHhhcCC
Q 026418 135 LAHILVYETP 144 (239)
Q Consensus 135 ~~~~~~~~~~ 144 (239)
+.++.++..+
T Consensus 285 ~~~~~~~~~~ 294 (311)
T 3o26_A 285 EHVVRIALFP 294 (311)
T ss_dssp HHHHHHHTCC
T ss_pred HHHHHHHhCC
Confidence 8888877654
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.78 E-value=8e-05 Score=57.88 Aligned_cols=107 Identities=15% Similarity=0.027 Sum_probs=72.7
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++++++.. .+..++|++||. +.+... + ..+...|+.+|...+.+.+.+
T Consensus 118 ~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~-~~~~~~------~------------~~~~~~Y~asKaal~~l~~~l 178 (274)
T 3e03_A 118 QQVNARGSFVCAQACLPHLLQAPNPHILTLAPP-PSLNPA------W------------WGAHTGYTLAKMGMSLVTLGL 178 (274)
T ss_dssp HHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCC-CCCCHH------H------------HHHCHHHHHHHHHHHHHHHHH
T ss_pred HhHhhHhHHHHHHHHHHHHHhcCCceEEEECCh-HhcCCC------C------------CCCCchHHHHHHHHHHHHHHH
Confidence 57899999999998854 345799999996 332110 0 013567999999999999888
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
+.+ .|+++..+.|+.+...... ....+.. ...+...+|+|+++++++...
T Consensus 179 a~e~~~~gI~vn~v~PG~~v~T~~~-----------~~~~~~~------~~~~~~pedvA~~v~~l~s~~ 231 (274)
T 3e03_A 179 AAEFGPQGVAINALWPRTVIATDAI-----------NMLPGVD------AAACRRPEIMADAAHAVLTRE 231 (274)
T ss_dssp HHHHGGGTCEEEEEECSBCBCC------------------CCC------GGGSBCTHHHHHHHHHHHTSC
T ss_pred HHHhhhcCEEEEEEECCcccccchh-----------hhccccc------ccccCCHHHHHHHHHHHhCcc
Confidence 776 3799999999854432210 1111111 122668999999999998754
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=97.73 E-value=5.4e-05 Score=63.81 Aligned_cols=110 Identities=12% Similarity=-0.032 Sum_probs=80.2
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+++|+.|+.++.+++.+.+..+||++||.++++|.. ....|+.+|...+.+.+++. ..
T Consensus 348 l~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g~~---------------------g~~~YaAaKa~ldala~~~~-~~ 405 (496)
T 3mje_A 348 MRAKLTAARHLHELTADLDLDAFVLFSSGAAVWGSG---------------------GQPGYAAANAYLDALAEHRR-SL 405 (496)
T ss_dssp HHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTTCT---------------------TCHHHHHHHHHHHHHHHHHH-HT
T ss_pred HHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCCCC---------------------CcHHHHHHHHHHHHHHHHHH-hc
Confidence 678999999999999998889999999987776532 24679999999999988764 56
Q ss_pred CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC
Q 026418 82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS 145 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 145 (239)
|++++.+.|+.+.+.++.... .....+.+. ....+..+++++++..++....
T Consensus 406 Gi~v~sV~pG~w~~~gm~~~~----~~~~~l~~~--------g~~~l~pe~~~~~l~~~l~~~~ 457 (496)
T 3mje_A 406 GLTASSVAWGTWGEVGMATDP----EVHDRLVRQ--------GVLAMEPEHALGALDQMLENDD 457 (496)
T ss_dssp TCCCEEEEECEESSSCC----------CHHHHHT--------TEEEECHHHHHHHHHHHHHHTC
T ss_pred CCeEEEEECCcccCCccccCh----HHHHHHHhc--------CCCCCCHHHHHHHHHHHHcCCC
Confidence 999999999988776543211 111112111 1234578899999999887554
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00041 Score=53.22 Aligned_cols=117 Identities=14% Similarity=0.018 Sum_probs=75.9
Q ss_pred CchhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 1 MVEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 1 ~~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
++++|+.|+..+.+++.+ .+-.++|++||+++..+. .....|+.+|.....+.+.
T Consensus 112 ~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~---------------------~~~~~Y~asKaal~~ltr~ 170 (254)
T 4fn4_A 112 VLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGG---------------------FAGAPYTVAKHGLIGLTRS 170 (254)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSS---------------------SSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCC---------------------CCChHHHHHHHHHHHHHHH
Confidence 367899999888877643 345689999997443321 1246799999999988888
Q ss_pred HHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 77 ~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
++.+ .|+++-.+-||.+--+.................+...+ . .-+...+|+|.++++++..
T Consensus 171 lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~-~----~R~g~pediA~~v~fLaSd 235 (254)
T 4fn4_A 171 IAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSL-S----SRLAEPEDIANVIVFLASD 235 (254)
T ss_dssp HHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTT-C----CCCBCHHHHHHHHHHHHSG
T ss_pred HHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCC-C----CCCcCHHHHHHHHHHHhCc
Confidence 8766 47899999999986553222111111222222221111 0 1244689999999998853
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=97.62 E-value=0.0002 Score=55.04 Aligned_cols=115 Identities=16% Similarity=0.040 Sum_probs=74.0
Q ss_pred chhHhHHHHHHHHHHHhc------CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA------KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAW 75 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~------~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~ 75 (239)
+++|+.|+.++++++... +..++|++||. +.+... .+...|+.+|...+.+.+
T Consensus 123 ~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~asKaa~~~~~~ 181 (259)
T 1oaa_A 123 WALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSL-CALQPY--------------------KGWGLYCAGKAARDMLYQ 181 (259)
T ss_dssp HHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCG-GGTSCC--------------------TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCc-hhcCCC--------------------CCccHHHHHHHHHHHHHH
Confidence 678999999999999754 23579999996 443211 135679999999999999
Q ss_pred HHHHHc-CccEEEEecCcccCCCCCCCCC--hhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 76 EEAVAR-GVDLVVVNPVLVLGPLLQSTVN--ASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 76 ~~~~~~-~~~~~i~Rp~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
.++.+. ++++..+.||.+-.+....... ........+.... + ...+...+|+|+++++++..
T Consensus 182 ~la~e~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~----p--~~~~~~p~dvA~~v~~l~~~ 246 (259)
T 1oaa_A 182 VLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLK----S--DGALVDCGTSAQKLLGLLQK 246 (259)
T ss_dssp HHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHH----H--TTCSBCHHHHHHHHHHHHHH
T ss_pred HHHhhCCCceEEEecCCCcCcchHHHHhhccCChhHHHHHHHhh----h--cCCcCCHHHHHHHHHHHHhh
Confidence 998775 4788889998874331000000 0000000111000 0 13467899999999988863
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00033 Score=60.77 Aligned_cols=112 Identities=16% Similarity=0.106 Sum_probs=75.6
Q ss_pred chhHhHHHHHHHHHH----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.|+.++++++ ++.+..++|++||.++.++.. ....|+.+|...+.+.+.+
T Consensus 130 ~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~~---------------------~~~~Y~asKaal~~lt~~l 188 (613)
T 3oml_A 130 NDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNF---------------------GQVNYTAAKMGLIGLANTV 188 (613)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCCT---------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCC---------------------CChHHHHHHHHHHHHHHHH
Confidence 679999999999998 455567999999976665421 2467999999999999888
Q ss_pred HHHc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC-CCc-eEEE
Q 026418 78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS-ASG-RYLC 152 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~-~~~-~y~~ 152 (239)
+.+. |+.+..+.|+.+- +...... +......+..+|+|.++++++.... ..| ++++
T Consensus 189 a~e~~~~gI~vn~v~Pg~~t-~~~~~~~------------------~~~~~~~~~pedvA~~v~~L~s~~~~~tG~~i~v 249 (613)
T 3oml_A 189 AIEGARNNVLCNVIVPTAAS-RMTEGIL------------------PDILFNELKPKLIAPVVAYLCHESCEDNGSYIES 249 (613)
T ss_dssp HHHHGGGTEEEEEEEEC-------CCCC------------------CHHHHTTCCGGGTHHHHHHTTSTTCCCCSCEEEE
T ss_pred HHHhCccCeEEEEEECCCCC-hhhhhcc------------------chhhhhcCCHHHHHHHHHHhcCCCcCCCceEEEE
Confidence 7664 7899999998542 1100000 0011223478999999999886542 234 5555
Q ss_pred e
Q 026418 153 A 153 (239)
Q Consensus 153 ~ 153 (239)
.
T Consensus 250 d 250 (613)
T 3oml_A 250 A 250 (613)
T ss_dssp E
T ss_pred C
Confidence 4
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00016 Score=57.47 Aligned_cols=130 Identities=13% Similarity=0.030 Sum_probs=65.1
Q ss_pred chhHhHHHHHHHHHHHhcC--CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCC-chHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK-NWYCYGKAVAEKAAWEEA 78 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~--v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~-~~Y~~sK~~~E~~~~~~~ 78 (239)
+++|+.++.++++++...= -.++|++||.++..+. ... ..|+.+|...+.+.+.++
T Consensus 163 ~~vN~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~---------------------~~~~~~Y~asKaal~~l~~~la 221 (319)
T 2ptg_A 163 VSSSSYSFVSLLQHFLPLMKEGGSALALSYIASEKVI---------------------PGYGGGMSSAKAALESDCRTLA 221 (319)
T ss_dssp HHHHTHHHHHHHHHHGGGEEEEEEEEEEEECC---------------------------------------THHHHHHHH
T ss_pred HhHhhHHHHHHHHHHHHHHhcCceEEEEecccccccc---------------------CccchhhHHHHHHHHHHHHHHH
Confidence 6799999999999997641 1589999996332211 012 469999999998888776
Q ss_pred HH----cCccEEEEecCcccCCCCCCCCCh-hHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eE
Q 026418 79 VA----RGVDLVVVNPVLVLGPLLQSTVNA-SIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RY 150 (239)
Q Consensus 79 ~~----~~~~~~i~Rp~~v~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y 150 (239)
.+ .|+++..++|+.+..+........ ................+ ...+...+|+|+++++++... ...| ++
T Consensus 222 ~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~r~~~peevA~~v~~L~s~~~~~itG~~i 299 (319)
T 2ptg_A 222 FEAGRARAVRVNCISAGPLKSRAASAIGKAGDKTFIDLAIDYSEANAP--LQKELESDDVGRAALFLLSPLARAVTGATL 299 (319)
T ss_dssp HHHHHHHCCEEEEEEECCCC---------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEE
T ss_pred HHhccccCeeEEEEeeCCccChhhhhcccccchhhHHHHHHHHhccCC--CCCCCCHHHHHHHHHHHhCcccCCccCCEE
Confidence 54 589999999999876532110000 00000000000000001 123568899999999988642 2334 55
Q ss_pred EEec
Q 026418 151 LCAE 154 (239)
Q Consensus 151 ~~~~ 154 (239)
.+.|
T Consensus 300 ~vdG 303 (319)
T 2ptg_A 300 YVDN 303 (319)
T ss_dssp EEST
T ss_pred EECC
Confidence 5554
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00022 Score=60.60 Aligned_cols=129 Identities=12% Similarity=-0.047 Sum_probs=86.9
Q ss_pred chhHhHHHHHHHHHHHhcC-----CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK-----VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~-----v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.|+.++.+++.... ..+||++||+++++|.. ....|+.+|...+.+.++
T Consensus 370 ~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g~~---------------------g~~~YaaaKa~l~~lA~~ 428 (525)
T 3qp9_A 370 VTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWGGA---------------------GQGAYAAGTAFLDALAGQ 428 (525)
T ss_dssp HHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTCCT---------------------TCHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCCCC---------------------CCHHHHHHHHHHHHHHHH
Confidence 6789999999999998876 78999999986665422 256799999999988766
Q ss_pred HHHHcCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCceEEEecCC
Q 026418 77 EAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESV 156 (239)
Q Consensus 77 ~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~~~~ 156 (239)
+. ..|++++.+.|+.+ +.++... . .....+.+. ....+..+++++++..++..... ... -..
T Consensus 429 ~~-~~gi~v~sI~pG~~-~tgm~~~-~---~~~~~~~~~--------g~~~l~pee~a~~l~~~l~~~~~--~v~--v~~ 490 (525)
T 3qp9_A 429 HR-ADGPTVTSVAWSPW-EGSRVTE-G---ATGERLRRL--------GLRPLAPATALTALDTALGHGDT--AVT--IAD 490 (525)
T ss_dssp CC-SSCCEEEEEEECCB-TTSGGGS-S---HHHHHHHHT--------TBCCBCHHHHHHHHHHHHHHTCS--EEE--ECC
T ss_pred HH-hCCCCEEEEECCcc-ccccccc-h---hhHHHHHhc--------CCCCCCHHHHHHHHHHHHhCCCC--eEE--EEe
Confidence 53 45899999999998 3322111 0 111111111 12356789999999999975432 111 224
Q ss_pred CCHHHHHHHHHHh
Q 026418 157 LHRGEVVEILAKF 169 (239)
Q Consensus 157 ~s~~el~~~i~~~ 169 (239)
+.|..+...+...
T Consensus 491 ~dw~~~~~~~~~~ 503 (525)
T 3qp9_A 491 VDWSSFAPGFTTA 503 (525)
T ss_dssp BCHHHHHHHHHSS
T ss_pred CCHHHHHhhcccc
Confidence 5666666655544
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=97.55 E-value=0.0014 Score=49.96 Aligned_cols=118 Identities=10% Similarity=0.048 Sum_probs=76.9
Q ss_pred CchhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 1 MVEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 1 ~~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
++++|+.++..+.+++.+ .+ .++|++||.++..+. .....|+.+|.....+.+.
T Consensus 102 ~~~vNl~g~~~~~~~~~~~m~~~~-G~IInisS~~~~~~~---------------------~~~~~Y~asKaal~~ltk~ 159 (247)
T 3ged_A 102 ILSVGLKAPYELSRLCRDELIKNK-GRIINIASTRAFQSE---------------------PDSEAYASAKGGIVALTHA 159 (247)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGTSCC---------------------TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHHhhcC-CcEEEEeecccccCC---------------------CCCHHHHHHHHHHHHHHHH
Confidence 367899999888877743 34 689999997443221 1246799999999988888
Q ss_pred HHHHc--CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCc-eEEEe
Q 026418 77 EAVAR--GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASG-RYLCA 153 (239)
Q Consensus 77 ~~~~~--~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~y~~~ 153 (239)
++.+. ++++-.+-||.+--+... ..........+. .-+...+|+|.++++++...-.-| ++.+.
T Consensus 160 lA~ela~~IrVN~I~PG~i~t~~~~-------~~~~~~~~~~Pl------~R~g~pediA~~v~fL~s~~~iTG~~i~VD 226 (247)
T 3ged_A 160 LAMSLGPDVLVNCIAPGWINVTEQQ-------EFTQEDCAAIPA------GKVGTPKDISNMVLFLCQQDFITGETIIVD 226 (247)
T ss_dssp HHHHHTTTSEEEEEEECSBCCCC----------CCHHHHHTSTT------SSCBCHHHHHHHHHHHHHCSSCCSCEEEES
T ss_pred HHHHHCCCCEEEEEecCcCCCCCcH-------HHHHHHHhcCCC------CCCcCHHHHHHHHHHHHhCCCCCCCeEEEC
Confidence 87764 678888999988543221 111222222211 225568999999999987544445 45544
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=97.46 E-value=0.0019 Score=49.01 Aligned_cols=113 Identities=11% Similarity=0.083 Sum_probs=75.8
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..+.+++.. .+ .++|++||+++..+. .....|+.||.....+.+.+
T Consensus 104 ~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~~~---------------------~~~~~Y~asKaav~~ltr~l 161 (242)
T 4b79_A 104 LRLNLSAAMLASQLARPLLAQRG-GSILNIASMYSTFGS---------------------ADRPAYSASKGAIVQLTRSL 161 (242)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHC-EEEEEECCGGGTSCC---------------------SSCHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeeccccCCC---------------------CCCHHHHHHHHHHHHHHHHH
Confidence 67899999888877643 34 689999997443321 12467999999999998888
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
+.+ .|+++-.+-||.+--|..... .........+.+..+. .-+-..+|+|.++++++..
T Consensus 162 A~Ela~~gIrVNaV~PG~i~T~m~~~~-~~~~~~~~~~~~~~Pl------gR~g~peeiA~~v~fLaSd 223 (242)
T 4b79_A 162 ACEYAAERIRVNAIAPGWIDTPLGAGL-KADVEATRRIMQRTPL------ARWGEAPEVASAAAFLCGP 223 (242)
T ss_dssp HHHHGGGTEEEEEEEECSBCCC------CCCHHHHHHHHHTCTT------CSCBCHHHHHHHHHHHTSG
T ss_pred HHHhhhcCeEEEEEEeCCCCChhhhcc-cCCHHHHHHHHhcCCC------CCCcCHHHHHHHHHHHhCc
Confidence 765 478999999999866532211 1112334444444332 2255689999999998853
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=97.31 E-value=0.0048 Score=47.47 Aligned_cols=128 Identities=17% Similarity=0.134 Sum_probs=78.0
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..+.+++. +.+-.++|++||.++..+.+ .....|+.+|...+.+.+.+
T Consensus 108 ~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~--------------------~~~~~Y~asKaal~~lt~~l 167 (261)
T 4h15_A 108 LSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLP--------------------ESTTAYAAAKAALSTYSKAM 167 (261)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT--------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCC--------------------CccHHHHHHHHHHHHHHHHH
Confidence 6789999988887764 34556899999974433211 12467999999999888888
Q ss_pred HHH---cCccEEEEecCcccCCCCCC---------CCC--hhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQS---------TVN--ASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~---------~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
+.+ .|+++-.+-||.+--+.... ... .....+.......+ ..-+...+|+|+++++++..
T Consensus 168 A~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P------lgR~g~peevA~~v~fLaS~ 241 (261)
T 4h15_A 168 SKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIP------LGRPAKPEEVANLIAFLASD 241 (261)
T ss_dssp HHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCT------TSSCBCHHHHHHHHHHHHSG
T ss_pred HHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCC------CCCCcCHHHHHHHHHHHhCc
Confidence 765 48899999999885331000 000 00001111111111 12366789999999998853
Q ss_pred C--CCCc-eEEEecC
Q 026418 144 P--SASG-RYLCAES 155 (239)
Q Consensus 144 ~--~~~~-~y~~~~~ 155 (239)
. -.-| ++.+.|.
T Consensus 242 ~a~~itG~~i~VDGG 256 (261)
T 4h15_A 242 RAASITGAEYTIDGG 256 (261)
T ss_dssp GGTTCCSCEEEESTT
T ss_pred hhcCccCcEEEECCc
Confidence 2 2234 5566544
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00053 Score=54.34 Aligned_cols=128 Identities=14% Similarity=0.048 Sum_probs=78.2
Q ss_pred chhHhHHHHHHHHHHHhcC--CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~--v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++.++++++...= -.++|++||.++..+.+ .....|+.+|...+.+.+.++.
T Consensus 150 ~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~--------------------~~~~~Y~asKaal~~l~~~la~ 209 (315)
T 2o2s_A 150 SSNSAYSFVSLLQHFGPIMNEGGSAVTLSYLAAERVVP--------------------GYGGGMSSAKAALESDTRTLAW 209 (315)
T ss_dssp HHHHTHHHHHHHHHHSTTEEEEEEEEEEEEGGGTSCCT--------------------TCCTTHHHHHHHHHHHHHHHHH
T ss_pred HhhhhHHHHHHHHHHHHHHhcCCEEEEEecccccccCC--------------------CccHHHHHHHHHHHHHHHHHHH
Confidence 6789999999999997641 15899999963322110 0114699999999999888765
Q ss_pred H----cCccEEEEecCcccCCCCCC-----CCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc
Q 026418 80 A----RGVDLVVVNPVLVLGPLLQS-----TVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG 148 (239)
Q Consensus 80 ~----~~~~~~i~Rp~~v~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~ 148 (239)
+ .|+++..++||.+..+.... ...........+....+ ...+...+|+|+++++++... ...|
T Consensus 210 el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p------~~r~~~pedvA~~v~~L~s~~~~~itG 283 (315)
T 2o2s_A 210 EAGQKYGVRVNAISAGPLKSRAASAIGKSGEKSFIDYAIDYSYNNAP------LRRDLHSDDVGGAALFLLSPLARAVSG 283 (315)
T ss_dssp HHHHHTCCEEEEEEECCCCCHHHHHTTCSSSSCHHHHHHHHHHHHSS------SCCCCCHHHHHHHHHHHTSGGGTTCCS
T ss_pred HhCcccCeEEEEEecccccchhhhhccccccchhHHHHHHHHhccCC------CCCCCCHHHHHHHHHHHhCchhccCcC
Confidence 4 58999999999986431000 00000011111111111 123567899999999988642 2234
Q ss_pred -eEEEecC
Q 026418 149 -RYLCAES 155 (239)
Q Consensus 149 -~y~~~~~ 155 (239)
.+.+.|.
T Consensus 284 ~~i~vdGG 291 (315)
T 2o2s_A 284 VTLYVDNG 291 (315)
T ss_dssp CEEEESTT
T ss_pred CEEEECCC
Confidence 4455443
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00045 Score=53.42 Aligned_cols=126 Identities=10% Similarity=-0.058 Sum_probs=78.7
Q ss_pred chhHhHHHHHHHHHHHhcC--CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~--v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++.++++++.+.- -.++|++||. ..++. .....|+.+|...+.+.+.++.
T Consensus 120 ~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~-~~~~~---------------------~~~~~Y~asKaa~~~l~~~la~ 177 (269)
T 2h7i_A 120 IHISAYSYASMAKALLPIMNPGGSIVGMDFD-PSRAM---------------------PAYNWMTVAKSALESVNRFVAR 177 (269)
T ss_dssp HHHHTHHHHHHHHHHGGGEEEEEEEEEEECC-CSSCC---------------------TTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHhhccCCeEEEEcCc-ccccc---------------------CchHHHHHHHHHHHHHHHHHHH
Confidence 5789999999999997641 2589999995 33211 1246799999999999988876
Q ss_pred H---cCccEEEEecCcccCCCCCC----CCChh-HH----HHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--
Q 026418 80 A---RGVDLVVVNPVLVLGPLLQS----TVNAS-II----HILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS-- 145 (239)
Q Consensus 80 ~---~~~~~~i~Rp~~v~G~~~~~----~~~~~-~~----~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~-- 145 (239)
+ .|+++..++|+.+..+.... ..... .. ....+....+ . .+.+...+|+|+++++++....
T Consensus 178 e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p----~-~rr~~~p~dvA~~v~~L~s~~~~~ 252 (269)
T 2h7i_A 178 EAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAP----I-GWNMKDATPVAKTVCALLSDWLPA 252 (269)
T ss_dssp HHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCT----T-CCCTTCCHHHHHHHHHHHSSSCTT
T ss_pred HhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCC----c-ccCCCCHHHHHHHHHHHhCchhcc
Confidence 6 38999999999886531100 00000 00 0011111111 1 1136678999999999986432
Q ss_pred CCc-eEEEec
Q 026418 146 ASG-RYLCAE 154 (239)
Q Consensus 146 ~~~-~y~~~~ 154 (239)
..| ++.+.|
T Consensus 253 itG~~i~vdG 262 (269)
T 2h7i_A 253 TTGDIIYADG 262 (269)
T ss_dssp CCSEEEEEST
T ss_pred CcceEEEecC
Confidence 234 445543
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=97.20 E-value=0.0014 Score=50.81 Aligned_cols=116 Identities=15% Similarity=0.030 Sum_probs=74.7
Q ss_pred CchhHhHHHHHHHHHHHhcC--CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHH
Q 026418 1 MVEPAVIGTKNVIVAAAEAK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA 78 (239)
Q Consensus 1 ~~~~Nv~~t~~ll~a~~~~~--v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~ 78 (239)
++++|+.|+..+.+++...= -.++|++||.++..+. .....|+.+|.....+.+.++
T Consensus 130 ~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~---------------------~~~~~Y~asKaav~~ltr~lA 188 (273)
T 4fgs_A 130 TFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGT---------------------PAFSVYAASKAALRSFARNWI 188 (273)
T ss_dssp HHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCC---------------------TTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCC---------------------CCchHHHHHHHHHHHHHHHHH
Confidence 36899999999999986541 2579999997443321 124679999999999999887
Q ss_pred HHc---CccEEEEecCcccCCCCCCCCCh----hHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 79 VAR---GVDLVVVNPVLVLGPLLQSTVNA----SIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 79 ~~~---~~~~~i~Rp~~v~G~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
.+. |+++-.+-||.+--+........ ....+..+....+. .-+...+|+|.++++++..
T Consensus 189 ~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~Pl------gR~g~peeiA~~v~FLaSd 254 (273)
T 4fgs_A 189 LDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPM------GRVGRAEEVAAAALFLASD 254 (273)
T ss_dssp HHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTT------SSCBCHHHHHHHHHHHHSG
T ss_pred HHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCC------CCCcCHHHHHHHHHHHhCc
Confidence 764 68899999998865532211110 01122223222221 2255689999999998853
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0066 Score=46.47 Aligned_cols=114 Identities=11% Similarity=0.000 Sum_probs=76.8
Q ss_pred chhHhHHHHHHHHHHHhcC--CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~--v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++..+.+++...- -.++|++||.++..+. .....|+.+|...+.+.+.++.
T Consensus 118 ~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~---------------------~~~~~Y~asKaal~~ltr~lA~ 176 (256)
T 4fs3_A 118 QDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAV---------------------QNYNVMGVAKASLEANVKYLAL 176 (256)
T ss_dssp HHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCC---------------------TTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCc---------------------ccchhhHHHHHHHHHHHHHHHH
Confidence 4678888888888876542 2589999997444321 1246799999999998888876
Q ss_pred H---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 80 A---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 80 ~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
+ .|+++-.+.||.+--+..... .........+....+. .-+...+|+|.++++++..
T Consensus 177 Ela~~gIrVN~V~PG~i~T~~~~~~-~~~~~~~~~~~~~~Pl------~R~g~peevA~~v~fL~Sd 236 (256)
T 4fs3_A 177 DLGPDNIRVNAISAGPIRTLSAKGV-GGFNTILKEIKERAPL------KRNVDQVEVGKTAAYLLSD 236 (256)
T ss_dssp HHGGGTEEEEEEEECCCCSGGGTTC-TTHHHHHHHHHHHSTT------SSCCCHHHHHHHHHHHHSG
T ss_pred HhCccCeEEEEEecCCCCChhhhhc-cCCHHHHHHHHhcCCC------CCCcCHHHHHHHHHHHhCc
Confidence 5 489999999998865543221 1122333444433321 2245689999999998853
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0048 Score=47.36 Aligned_cols=125 Identities=18% Similarity=0.200 Sum_probs=79.4
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..+.+++.. .+ .++|++||.++..+.+ ....|+.+|.....+.+.+
T Consensus 110 ~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~~~~---------------------~~~~Y~asKaav~~ltr~l 167 (258)
T 4gkb_A 110 LERNLIHYYAMAHYCVPHLKATR-GAIVNISSKTAVTGQG---------------------NTSGYCASKGAQLALTREW 167 (258)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTHHHHCCS---------------------SCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHhcC-CeEEEEeehhhccCCC---------------------CchHHHHHHHHHHHHHHHH
Confidence 67899999888887743 33 6899999975544321 2467999999999998888
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCC---hhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVN---ASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG- 148 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~- 148 (239)
+.+ .|+++-.+-||.+--+....... .....+..+....++ .+-+...+|+|.++++++... -.-|
T Consensus 168 A~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl-----g~R~g~peeiA~~v~fLaS~~a~~iTG~ 242 (258)
T 4gkb_A 168 AVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPL-----GRRFTTPDEIADTAVFLLSPRASHTTGE 242 (258)
T ss_dssp HHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTT-----TTSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred HHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCC-----CCCCcCHHHHHHHHHHHhCchhcCccCC
Confidence 765 48999999999996553221100 001122233332221 123556899999999988532 2234
Q ss_pred eEEEe
Q 026418 149 RYLCA 153 (239)
Q Consensus 149 ~y~~~ 153 (239)
++.+.
T Consensus 243 ~i~VD 247 (258)
T 4gkb_A 243 WLFVD 247 (258)
T ss_dssp EEEES
T ss_pred eEEEC
Confidence 55554
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0028 Score=48.54 Aligned_cols=126 Identities=10% Similarity=0.037 Sum_probs=78.1
Q ss_pred CchhHhHHHHHHHHHHHh-----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHH
Q 026418 1 MVEPAVIGTKNVIVAAAE-----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAW 75 (239)
Q Consensus 1 ~~~~Nv~~t~~ll~a~~~-----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~ 75 (239)
++++|+.|+..+.+++.+ .+-.++|++||.++..+. .....|+.+|.....+.+
T Consensus 113 ~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~---------------------~~~~~Y~asKaal~~ltr 171 (255)
T 4g81_D 113 VIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAAR---------------------PTVAPYTAAKGGIKMLTC 171 (255)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBC---------------------TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCC---------------------CCchhHHHHHHHHHHHHH
Confidence 368899999888877632 234689999997443221 124679999999998888
Q ss_pred HHHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-e
Q 026418 76 EEAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-R 149 (239)
Q Consensus 76 ~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~ 149 (239)
.++.+ .|+++-.+-||.+.-+..... .........+....+. .-+...+|+|.++++++... -.-| +
T Consensus 172 ~lA~ela~~gIrVN~V~PG~i~T~~~~~~-~~~~~~~~~~~~~~Pl------~R~g~pediA~~v~fL~S~~a~~iTG~~ 244 (255)
T 4g81_D 172 SMAAEWAQFNIQTNAIGPGYILTDMNTAL-IEDKQFDSWVKSSTPS------QRWGRPEELIGTAIFLSSKASDYINGQI 244 (255)
T ss_dssp HHHHHHGGGTEEEEEEEECSBCCGGGHHH-HTCHHHHHHHHHHSTT------CSCBCGGGGHHHHHHHHSGGGTTCCSCE
T ss_pred HHHHHhcccCeEEEEEeeCCCCCchhhcc-cCCHHHHHHHHhCCCC------CCCcCHHHHHHHHHHHhCchhCCCcCCE
Confidence 88765 478999999999865421100 0001111122222221 22556789999999988532 2234 5
Q ss_pred EEEec
Q 026418 150 YLCAE 154 (239)
Q Consensus 150 y~~~~ 154 (239)
+.+.|
T Consensus 245 i~VDG 249 (255)
T 4g81_D 245 IYVDG 249 (255)
T ss_dssp EEEST
T ss_pred EEECC
Confidence 55543
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0043 Score=47.26 Aligned_cols=115 Identities=14% Similarity=0.058 Sum_probs=74.6
Q ss_pred CchhHhHHHHHHHHHHHh----cC-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHH
Q 026418 1 MVEPAVIGTKNVIVAAAE----AK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAW 75 (239)
Q Consensus 1 ~~~~Nv~~t~~ll~a~~~----~~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~ 75 (239)
++++|+.|+..+.+++.+ .+ -.++|++||+++..+. .....|+.||.....+.+
T Consensus 106 ~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~---------------------~~~~~Y~asKaav~~ltr 164 (247)
T 4hp8_A 106 VMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGG---------------------IRVPSYTAAKHGVAGLTK 164 (247)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC---------------------SSCHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCC---------------------CCChHHHHHHHHHHHHHH
Confidence 368999999988887532 33 4689999997443321 124579999999999888
Q ss_pred HHHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 76 EEAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 76 ~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
.++.+ .|+++-.+-||.+--+.... ..........+.+..+. .-+-..+|+|.++++++..
T Consensus 165 ~lA~Ela~~gIrVNaV~PG~i~T~~~~~-~~~~~~~~~~~~~~~Pl------gR~g~peeiA~~v~fLaSd 228 (247)
T 4hp8_A 165 LLANEWAAKGINVNAIAPGYIETNNTEA-LRADAARNKAILERIPA------GRWGHSEDIAGAAVFLSSA 228 (247)
T ss_dssp HHHHHHGGGTEEEEEEEECSBCSGGGHH-HHTSHHHHHHHHTTCTT------SSCBCTHHHHHHHHHHTSG
T ss_pred HHHHHHhhcCeEEEEEeeCCCCCcchhh-cccCHHHHHHHHhCCCC------CCCcCHHHHHHHHHHHhCc
Confidence 87765 47899999999986442110 00001122233333221 2255679999999998853
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0026 Score=50.69 Aligned_cols=74 Identities=5% Similarity=-0.089 Sum_probs=55.6
Q ss_pred chhHhHHHHHHHHHHHhcCC--CEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCc-hHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKV--RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKN-WYCYGKAVAEKAAWEEA 78 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v--~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~-~Y~~sK~~~E~~~~~~~ 78 (239)
+++|+.++..+.+++...=. .++|++||.++..+. .... .|+.||...+.+.+.++
T Consensus 143 ~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~---------------------~~~~~~Y~asKaal~~~~~~la 201 (329)
T 3lt0_A 143 LSKSSYSLISLCKYFVNIMKPQSSIISLTYHASQKVV---------------------PGYGGGMSSAKAALESDTRVLA 201 (329)
T ss_dssp HHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSCC---------------------TTCTTTHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHhhCCeEEEEeCccccCCC---------------------CcchHHHHHHHHHHHHHHHHHH
Confidence 68999999999999876421 489999996333211 1122 79999999998887776
Q ss_pred HH----cCccEEEEecCcccCC
Q 026418 79 VA----RGVDLVVVNPVLVLGP 96 (239)
Q Consensus 79 ~~----~~~~~~i~Rp~~v~G~ 96 (239)
.+ .|+++..+.||.+-.+
T Consensus 202 ~el~~~~gI~vn~v~PG~v~T~ 223 (329)
T 3lt0_A 202 YHLGRNYNIRINTISAGPLKSR 223 (329)
T ss_dssp HHHHHHHCCEEEEEEECCCCCH
T ss_pred HHhCCccCeEEEEEecceeech
Confidence 54 4899999999988643
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=95.47 E-value=0.015 Score=51.97 Aligned_cols=110 Identities=14% Similarity=0.055 Sum_probs=73.2
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+++|+.|+.++.+++.. .. +||++||.+++.|.+ ....|+.+|...+.+.+++. ..
T Consensus 639 ~~~nv~G~~~l~~~~~~-~l-~iV~~SS~ag~~g~~---------------------g~~~YaAaka~~~alA~~~~-~~ 694 (795)
T 3slk_A 639 LRPKVDGARNLLELIDP-DV-ALVLFSSVSGVLGSG---------------------GQGNYAAANSFLDALAQQRQ-SR 694 (795)
T ss_dssp HCCCCCHHHHHHHHSCT-TS-EEEEEEETHHHHTCS---------------------SCHHHHHHHHHHHHHHHHHH-HT
T ss_pred HHHHHHHHHHHHHHHhh-CC-EEEEEccHHhcCCCC---------------------CCHHHHHHHHHHHHHHHHHH-Hc
Confidence 57899999999999833 34 899999986766532 25679999998888887764 56
Q ss_pred CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC
Q 026418 82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS 145 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 145 (239)
|+++..+-||.+-.++.... ........+.+. ....+..+++..++..++....
T Consensus 695 Gi~v~sI~pG~v~t~g~~~~--~~~~~~~~~~~~--------g~~~l~~~e~~~~~~~~l~~~~ 748 (795)
T 3slk_A 695 GLPTRSLAWGPWAEHGMAST--LREAEQDRLARS--------GLLPISTEEGLSQFDAACGGAH 748 (795)
T ss_dssp TCCEEEEEECCCSCCCHHHH--HHHHHHHHHHHT--------TBCCCCHHHHHHHHHHHHTSSC
T ss_pred CCeEEEEECCeECcchhhcc--ccHHHHHHHHhc--------CCCCCCHHHHHHHHHHHHhCCC
Confidence 99999999998864421100 000111112111 1234567788888888887543
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=95.38 E-value=0.038 Score=47.81 Aligned_cols=113 Identities=16% Similarity=0.155 Sum_probs=73.3
Q ss_pred CchhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 1 MVEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 1 ~~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
++++|+.|+..+.+++.. .+-.++|++||.++.++.. ....|+.||.....+.+.
T Consensus 422 ~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~---------------------~~~~Y~asKaal~~lt~~ 480 (604)
T 2et6_A 422 VQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNF---------------------GQANYSSSKAGILGLSKT 480 (604)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCT---------------------TBHHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCC---------------------CChhHHHHHHHHHHHHHH
Confidence 368999999988888743 3446899999975555321 246799999999988888
Q ss_pred HHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC-CCc-eEE
Q 026418 77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS-ASG-RYL 151 (239)
Q Consensus 77 ~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~-~~~-~y~ 151 (239)
++.+ .|+++..+.|+. ...... ..+ .. ........+|+|.++++++.... ..| ++.
T Consensus 481 la~El~~~gIrVn~v~PG~--~T~m~~------~~~----~~-------~~~~~~~pe~vA~~v~~L~s~~~~itG~~~~ 541 (604)
T 2et6_A 481 MAIEGAKNNIKVNIVAPHA--ETAMTL------SIM----RE-------QDKNLYHADQVAPLLVYLGTDDVPVTGETFE 541 (604)
T ss_dssp HHHHHGGGTEEEEEEEECC--CCCC--------------------------CCSSCGGGTHHHHHHTTSTTCCCCSCEEE
T ss_pred HHHHhCccCeEEEEEcCCC--CCcccc------ccC----ch-------hhccCCCHHHHHHHHHHHhCCccCCCCcEEE
Confidence 7765 489999999973 211110 000 00 01224478999999999885432 334 554
Q ss_pred Ee
Q 026418 152 CA 153 (239)
Q Consensus 152 ~~ 153 (239)
+.
T Consensus 542 vd 543 (604)
T 2et6_A 542 IG 543 (604)
T ss_dssp EE
T ss_pred EC
Confidence 44
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=95.32 E-value=0.062 Score=51.91 Aligned_cols=109 Identities=10% Similarity=0.036 Sum_probs=70.0
Q ss_pred chhHhHHHHHHHHHHHhcC------CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHH-H
Q 026418 2 VEPAVIGTKNVIVAAAEAK------VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKA-A 74 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~------v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~-~ 74 (239)
+++|+.++..++++++... -.++|++||.++..+ ....|+.+|...+.+ .
T Consensus 795 ~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag~~g-----------------------g~~aYaASKAAL~~Ltt 851 (1887)
T 2uv8_A 795 MLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG-----------------------GDGMYSESKLSLETLFN 851 (1887)
T ss_dssp HTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTTCSS-----------------------CBTTHHHHHHHGGGHHH
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHhccC-----------------------CCchHHHHHHHHHHHHH
Confidence 6799999999999885432 158999999633322 135699999999998 5
Q ss_pred HHHHHHcC--ccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 75 WEEAVARG--VDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 75 ~~~~~~~~--~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
+.++...+ +++..+.||.+-+......... ........+ ..+...+|+|.++++++...
T Consensus 852 r~lA~ela~~IrVNaV~PG~V~tT~m~~~~~~----~~~~~~~~p-------lr~~sPEEVA~avlfLaSd~ 912 (1887)
T 2uv8_A 852 RWHSESWANQLTVCGAIIGWTRGTGLMSANNI----IAEGIEKMG-------VRTFSQKEMAFNLLGLLTPE 912 (1887)
T ss_dssp HHHHSSCTTTEEEEEEEECCEECC-----CCT----THHHHHTTS-------CCCEEHHHHHHHHHGGGSHH
T ss_pred HHHHHHhCCCeEEEEEEecccccccccccchh----HHHHHHhcC-------CCCCCHHHHHHHHHHHhCCC
Confidence 55554333 8889999999975322111000 111111111 13457999999999988643
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=95.06 E-value=0.044 Score=47.36 Aligned_cols=104 Identities=17% Similarity=0.088 Sum_probs=69.5
Q ss_pred CchhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 1 MVEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 1 ~~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
++++|+.|+..+.+++. +.+-.++|++||.++.++.. ....|+.+|....-+.+.
T Consensus 118 ~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~---------------------~~~~Y~asKaal~~lt~~ 176 (604)
T 2et6_A 118 VIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNF---------------------GQANYASAKSALLGFAET 176 (604)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT---------------------TBHHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCC---------------------CchHHHHHHHHHHHHHHH
Confidence 36899999998888774 33446899999976655421 145799999999998888
Q ss_pred HHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 77 ~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
++.+ .|+++..+.|+ +. + .+.... .. .........+|++.++++++...
T Consensus 177 la~El~~~gIrVn~v~Pg-~~----T-------~m~~~~---~~----~~~~~~~~pe~vA~~v~~L~s~~ 228 (604)
T 2et6_A 177 LAKEGAKYNIKANAIAPL-AR----S-------RMTESI---MP----PPMLEKLGPEKVAPLVLYLSSAE 228 (604)
T ss_dssp HHHHHGGGTEEEEEEEEC-CC----C-------HHHHTT---SC----HHHHTTCSHHHHHHHHHHHTSSS
T ss_pred HHHHhCccCeEEEEEccC-Cc----C-------cccccc---CC----hhhhccCCHHHHHHHHHHHhCCc
Confidence 8765 47899999996 21 1 000000 00 00012346889999999888643
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=94.41 E-value=0.025 Score=53.33 Aligned_cols=110 Identities=10% Similarity=0.037 Sum_probs=67.3
Q ss_pred CchhHhHHHHHHHHHHHhcC------CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHH
Q 026418 1 MVEPAVIGTKNVIVAAAEAK------VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAA 74 (239)
Q Consensus 1 ~~~~Nv~~t~~ll~a~~~~~------v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~ 74 (239)
++++|+.++.+++++++... -.++|++||.++..+ ....|+.+|...+.+.
T Consensus 595 v~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG~~G-----------------------g~saYaASKAAL~aLt 651 (1688)
T 2pff_A 595 IMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG-----------------------GDGMYSESKLSLETLF 651 (1688)
T ss_dssp HTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTTTSS-----------------------CBTTHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHhccC-----------------------CchHHHHHHHHHHHHH
Confidence 36899999999999884321 148999999643332 1356999999999983
Q ss_pred -HHHHHHcC--ccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 75 -WEEAVARG--VDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 75 -~~~~~~~~--~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
+.+++..+ +++..+.||.+-|........ ........ .+ ..+...+|+|+++++++...
T Consensus 652 trsLAeEla~~IRVNaVaPG~V~TT~M~~~~e----~~~~~l~~----ip---lR~~sPEEVA~aIlFLaSd~ 713 (1688)
T 2pff_A 652 NRWHSESWANQLTVCGAIIGWTRGTGLMSANN----IIAEGIEK----MG---VRTFSQKEMAFNLLGLLTPE 713 (1688)
T ss_dssp HHTTTSSCTTTEECCCCCCCCCCCCSSSCTTT----TCSTTTSS----SS---CCCCCCCTTHHHHHHHTSTT
T ss_pred HHHHHHHcCCCeEEEEEEECcCcCCcccCCch----HHHHHHHh----CC---CCCCCHHHHHHHHHHHhCCC
Confidence 33333222 777788888887532211100 00000000 11 12347899999999988644
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=94.08 E-value=0.13 Score=49.71 Aligned_cols=108 Identities=8% Similarity=-0.040 Sum_probs=68.6
Q ss_pred chhHhHHHHHHHHHHHhc------CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA------KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAW 75 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~------~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~ 75 (239)
+++|+.++.+++++++.. +-.++|++||.++..+ ....|+.+|...+.+.+
T Consensus 770 l~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~g-----------------------g~~aYaASKAAL~aLt~ 826 (1878)
T 2uv9_A 770 MLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTFG-----------------------NDGLYSESKLALETLFN 826 (1878)
T ss_dssp HTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSSS-----------------------CCSSHHHHHHHHTTHHH
T ss_pred HHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhccC-----------------------CchHHHHHHHHHHHHHH
Confidence 679999999998874321 1258999999644332 13469999999999877
Q ss_pred HHHHH-c--CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 76 EEAVA-R--GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 76 ~~~~~-~--~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
.+... . ++++..+.||.+-|.... .. ...........+ ..+...+|+|.++++++..
T Consensus 827 ~laAeEla~~IrVNaVaPG~V~gT~m~---~~-~~~~~~~~~~~p-------lr~~sPeEVA~avlfLaSd 886 (1878)
T 2uv9_A 827 RWYSESWGNYLTICGAVIGWTRGTGLM---SA-NNLVAEGVEKLG-------VRTFSQQEMAFNLLGLMAP 886 (1878)
T ss_dssp HHHHSTTTTTEEEEEEEECCBCCTTSC---SH-HHHTHHHHHTTT-------CCCBCHHHHHHHHHHHHSH
T ss_pred HHHHHHcCCCeEEEEEEecceecCccc---cc-chhhHHHHHhcC-------CCCCCHHHHHHHHHHHhCC
Confidence 65433 1 388999999988633221 11 111122222211 1234789999999988753
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=91.01 E-value=0.68 Score=37.70 Aligned_cols=76 Identities=13% Similarity=-0.097 Sum_probs=49.9
Q ss_pred chhHhHHHH-HHHHHHHhcC----CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTK-NVIVAAAEAK----VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~-~ll~a~~~~~----v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|..++. .+++++.... -.++|.+||+++..+.+. .....|+.+|...+.+.+.
T Consensus 199 v~Vn~~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~p~-------------------~~~~aY~AaKaal~~ltrs 259 (405)
T 3zu3_A 199 VAVMGGEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITHDI-------------------YWNGSIGAAKKDLDQKVLA 259 (405)
T ss_dssp HHHHSSHHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGTTT-------------------TTTSHHHHHHHHHHHHHHH
T ss_pred HHhhchhHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcCCC-------------------ccchHHHHHHHHHHHHHHH
Confidence 356666655 4555544322 147999999733322110 1136799999999999888
Q ss_pred HHHH---c-CccEEEEecCcccCC
Q 026418 77 EAVA---R-GVDLVVVNPVLVLGP 96 (239)
Q Consensus 77 ~~~~---~-~~~~~i~Rp~~v~G~ 96 (239)
++.+ . |+++-++-|+.+--+
T Consensus 260 LA~Ela~~~GIRVNaVaPG~i~T~ 283 (405)
T 3zu3_A 260 IRESLAAHGGGDARVSVLKAVVSQ 283 (405)
T ss_dssp HHHHHHTTTSCEEEEEECCCCCCH
T ss_pred HHHHhCcccCeEEEEEEeCCCcCc
Confidence 8765 3 789999999988543
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=90.31 E-value=0.69 Score=46.70 Aligned_cols=73 Identities=18% Similarity=0.165 Sum_probs=56.0
Q ss_pred CchhHhHHHHHHHHHHHhc--CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHH
Q 026418 1 MVEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA 78 (239)
Q Consensus 1 ~~~~Nv~~t~~ll~a~~~~--~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~ 78 (239)
++++|+.|+.++.+++... ...+||++||.++..|.. ....|+.+|...+.+.+...
T Consensus 1991 ~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~~---------------------g~~~Y~aaKaal~~l~~~rr 2049 (2512)
T 2vz8_A 1991 VSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGNA---------------------GQANYGFANSAMERICEKRR 2049 (2512)
T ss_dssp CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTCT---------------------TCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCCC---------------------CcHHHHHHHHHHHHHHHHHH
Confidence 4789999999998888754 246899999986655421 24679999999999998654
Q ss_pred HHcCccEEEEecCcccC
Q 026418 79 VARGVDLVVVNPVLVLG 95 (239)
Q Consensus 79 ~~~~~~~~i~Rp~~v~G 95 (239)
..|++...+-++.+-+
T Consensus 2050 -~~Gl~~~a~~~g~~~~ 2065 (2512)
T 2vz8_A 2050 -HDGLPGLAVQWGAIGD 2065 (2512)
T ss_dssp -HTTSCCCEEEECCBCT
T ss_pred -HCCCcEEEEEccCcCC
Confidence 4589988888876543
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=88.59 E-value=1.9 Score=35.36 Aligned_cols=36 Identities=14% Similarity=-0.136 Sum_probs=29.8
Q ss_pred chHHHHHHHHHHHHHHHHHH----cCccEEEEecCcccCC
Q 026418 61 NWYCYGKAVAEKAAWEEAVA----RGVDLVVVNPVLVLGP 96 (239)
Q Consensus 61 ~~Y~~sK~~~E~~~~~~~~~----~~~~~~i~Rp~~v~G~ 96 (239)
..|+.+|...+.+.+.++.+ .|+++.++-|+.+--+
T Consensus 258 ~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T~ 297 (418)
T 4eue_A 258 GTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALVTK 297 (418)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCCCH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCcCh
Confidence 77999999999888777664 5789999999988643
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=87.78 E-value=0.62 Score=38.20 Aligned_cols=76 Identities=18% Similarity=-0.090 Sum_probs=49.3
Q ss_pred hhHhHHHH-HHHHHHHhcC----CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 3 EPAVIGTK-NVIVAAAEAK----VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 3 ~~Nv~~t~-~ll~a~~~~~----v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
++|..++. .+++++.... -.++|.+||+++..+.+ ......|+.+|...+.+.+.+
T Consensus 215 ~Vn~~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p-------------------~~~~~aY~ASKaAl~~lTrsL 275 (422)
T 3s8m_A 215 TVMGGQDWELWIDALEGAGVLADGARSVAFSYIGTEITWP-------------------IYWHGALGKAKVDLDRTAQRL 275 (422)
T ss_dssp HHHSSHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHH-------------------HHTSHHHHHHHHHHHHHHHHH
T ss_pred HhhchhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCC-------------------CccchHHHHHHHHHHHHHHHH
Confidence 34444443 5556554332 14799999963322110 011367999999999998887
Q ss_pred HHH---cCccEEEEecCcccCCC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPL 97 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~ 97 (239)
+.+ .|+++-.+-|+.+--+.
T Consensus 276 A~Ela~~GIRVNaVaPG~i~T~~ 298 (422)
T 3s8m_A 276 NARLAKHGGGANVAVLKSVVTQA 298 (422)
T ss_dssp HHHHHTTTCEEEEEEECCCCCTT
T ss_pred HHHhCccCEEEEEEEcCCCcChh
Confidence 765 48999999999886543
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=82.81 E-value=0.21 Score=39.61 Aligned_cols=84 Identities=15% Similarity=0.066 Sum_probs=55.6
Q ss_pred chhHhHHHHHHHHHHHhcC-CC-EEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK-VR-RVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~-v~-~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
++.|+.+++++++++.+.+ .. +||++|.= . ..... ...+..+- ..+...++.++....++...+++
T Consensus 105 ~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNP-v-~~~t~-----~~~~~~~~-----~p~~~v~g~t~Ld~~r~~~~la~ 172 (329)
T 1b8p_A 105 LEANAQIFTVQGKAIDAVASRNIKVLVVGNP-A-NTNAY-----IAMKSAPS-----LPAKNFTAMLRLDHNRALSQIAA 172 (329)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCEEEECSSS-H-HHHHH-----HHHHTCTT-----SCGGGEEECCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEEEccCc-h-HHHHH-----HHHHHcCC-----CCHHHEEEeecHHHHHHHHHHHH
Confidence 4689999999999999984 55 89998871 1 00000 00111100 01223478888888888888888
Q ss_pred HcCccEEEEecCcccCCC
Q 026418 80 ARGVDLVVVNPVLVLGPL 97 (239)
Q Consensus 80 ~~~~~~~i~Rp~~v~G~~ 97 (239)
..|++..-++...|+|.+
T Consensus 173 ~lgv~~~~v~~~~v~G~H 190 (329)
T 1b8p_A 173 KTGKPVSSIEKLFVWGNH 190 (329)
T ss_dssp HHTCCGGGEESCEEEBCS
T ss_pred HhCcCHHHceEEEEEecc
Confidence 889887778877788854
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 239 | ||||
| d1y1pa1 | 342 | c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo | 9e-21 | |
| d2b69a1 | 312 | c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 | 7e-17 | |
| d1r6da_ | 322 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 8e-15 | |
| d1kewa_ | 361 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 8e-11 | |
| d1e6ua_ | 315 | c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras | 1e-09 | |
| d1db3a_ | 357 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric | 3e-08 | |
| d1oc2a_ | 346 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 5e-07 | |
| d2c5aa1 | 363 | c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T | 1e-05 | |
| d1t2aa_ | 347 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H | 9e-05 | |
| d1rpna_ | 321 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo | 0.003 |
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Score = 87.2 bits (214), Expect = 9e-21
Identities = 51/237 (21%), Positives = 80/237 (33%), Gaps = 20/237 (8%)
Query: 1 MVEPAVIGTKNVI-VAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFC--- 56
+V PA+ GT N + AAA V+R V TSS + + +DE W+
Sbjct: 103 VVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAK 162
Query: 57 -------KNTKNWYCYGKAVAEKAAWEE--AVARGVDLVVVNPVLVLGPLLQSTVNASII 107
+ + Y K AE AAW+ L V P +G + +
Sbjct: 163 TLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGST 222
Query: 108 H--ILKYLNGSAKTYANSVQA--YVHVRDVALAHILVYETPSASGRY-LCAESVLHRGEV 162
++ NG + YV D+ L H+ P R V
Sbjct: 223 SGWMMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTV 282
Query: 163 VEILAKFFPEYPIPTKCSDEKNPRKK-PYKFSNQKLKDLGLE-FTPVKQCLYETVKS 217
+ K +P P D+ K S + LK LG + +++ + + V S
Sbjct: 283 LATFRKLYPSKTFPADFPDQGQDLSKFDTAPSLEILKSLGRPGWRSIEESIKDLVGS 339
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 75.9 bits (186), Expect = 7e-17
Identities = 46/227 (20%), Positives = 83/227 (36%), Gaps = 13/227 (5%)
Query: 1 MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK 60
++ IGT N++ A R ++ S+ VY DP P E W + +
Sbjct: 88 TLKTNTIGTLNMLGLAKRVGAR-LLLAST-SEVYGDPEVHP---QSEDYWGHVNPI-GPR 141
Query: 61 NWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASI-IHILKYLNGSAKT 119
Y GK VAE + GV++ V GP + + IL+ L G T
Sbjct: 142 ACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLT 201
Query: 120 YANS---VQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIP 176
S +A+ +V D+ + + + +S L E +++
Sbjct: 202 VYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLV-GSGSE 260
Query: 177 TKCSDEKNPRKKPYKFSNQKLK-DLGLE-FTPVKQCLYETVKSLQEK 221
+ E + K +K K LG E P+++ L + + +++
Sbjct: 261 IQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKE 307
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Score = 70.2 bits (171), Expect = 8e-15
Identities = 44/220 (20%), Positives = 71/220 (32%), Gaps = 17/220 (7%)
Query: 7 IGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYG 66
GT+ ++ A +A V RVV S VY + ES + Y
Sbjct: 105 QGTQTLLQCAVDAGVGRVVH-VSTNQVYGSIDSGS---WTESSP------LEPNSPYAAS 154
Query: 67 KAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY---ANS 123
KA ++ A G+D+ + GP Q + + L+G +
Sbjct: 155 KAGSDLVARAYHRTYGLDVRITRCCNNYGP-YQHPEKLIPLFVTNLLDGGTLPLYGDGAN 213
Query: 124 VQAYVHVRDVALAHILVYETPSASGRY-LCAESVLHRGEVVEILAKFFPEYPIPTKCSDE 182
V+ +VH D LV A Y + L E+ IL + +
Sbjct: 214 VREWVHTDDHCRGIALVLAGGRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVAD 273
Query: 183 KNPRKKPYKFSNQKL-KDLGLE-FTPVKQCLYETVKSLQE 220
+ Y K+ ++LG L TV+ +E
Sbjct: 274 RKGHDLRYSLDGGKIERELGYRPQVSFADGLARTVRWYRE 313
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 58.6 bits (141), Expect = 8e-11
Identities = 36/234 (15%), Positives = 69/234 (29%), Gaps = 25/234 (10%)
Query: 6 VIGTKNVIVAAAE---------AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFC 56
++GT ++ A + R S+ VY D + + E
Sbjct: 101 IVGTYALLEVARKYWSALGEDKKNNFRFHHIST-DEVYGDLPHPDEVENSVTLPLFTETT 159
Query: 57 K-NTKNWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNG 115
+ Y KA ++ G+ +V N GP + IL L G
Sbjct: 160 AYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGP-YHFPEKLIPLVILNALEG 218
Query: 116 SAKTY---ANSVQAYVHVRDVALAHILVYETPSASGRYLCA----ESVLHRGEVVEILAK 168
+ ++ +++V D A A +V A Y + L + L
Sbjct: 219 KPLPIYGKGDQIRDWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLD 278
Query: 169 FFPEYPIPTKCSDEKNPRK----KPYKFSNQKLK-DLGLE-FTPVKQCLYETVK 216
+ + + Y K+ +LG + + + +TV+
Sbjct: 279 EIVPKATSYREQITYVADRPGHDRRYAIDAGKISRELGWKPLETFESGIRKTVE 332
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Score = 55.3 bits (132), Expect = 1e-09
Identities = 33/232 (14%), Positives = 61/232 (26%), Gaps = 26/232 (11%)
Query: 6 VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCY 65
++ N+I AA + V +++F S +Y + P + ES + T Y
Sbjct: 83 MMIESNIIHAAHQNDVNKLLFLGS-SCIYPKLAKQP---MAESELLQ-GTLEPTNEPYAI 137
Query: 66 GKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASII-----------------H 108
K K G D V P + GP + S +
Sbjct: 138 AKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPD 197
Query: 109 ILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAK 168
++ + +G+ V + + + LA+
Sbjct: 198 VVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQ 257
Query: 169 FFPE---YPIPTKCSDEKNPRKKPYKFSNQKLKDLGLE-FTPVKQCLYETVK 216
+ Y K +L LG ++ L T +
Sbjct: 258 TIAKVVGYKGRVVFDASKPDGTPRKLLDVTRLHQLGWYHEISLEAGLASTYQ 309
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Score = 51.0 bits (121), Expect = 3e-08
Identities = 28/206 (13%), Positives = 50/206 (24%), Gaps = 30/206 (14%)
Query: 6 VIGTKNVIVAAAEAKVR---RVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNW 62
+GT ++ A + R S+ +Y P E+ ++
Sbjct: 106 AMGTLRLLEAIRFLGLEKKTRFYQAST-SELYGLVQEIP---QKETTP------FYPRSP 155
Query: 63 YCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASII--HILKYLNGSAKTY 120
Y K A + G+ P T I I G
Sbjct: 156 YAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCL 215
Query: 121 A----NSVQAYVHVRDVALAHILVYETPSA-----------SGRYLCAESVLHRGEVVEI 165
+S++ + H +D ++ + S R + G +
Sbjct: 216 YLGNMDSLRDWGHAKDYVKMQWMMLQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRF 275
Query: 166 LAKFFPEYPIPTKCSDEKNPRKKPYK 191
E I + P KP
Sbjct: 276 EGTGVEEKGIVVSVTGHDAPGVKPGD 301
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 47.3 bits (111), Expect = 5e-07
Identities = 42/221 (19%), Positives = 69/221 (31%), Gaps = 13/221 (5%)
Query: 6 VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDL---EFCKNTKNW 62
IGT ++ AA + +R S VY D D + E N +
Sbjct: 101 FIGTYTLLEAARKYDIRF--HHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSP 158
Query: 63 YCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYAN 122
Y KA ++ + GV + N GP Q I L G
Sbjct: 159 YSSTKAASDLIVKAWVRSFGVKATISNCSNNYGP-YQHIEKFIPRQITNILAGIKPKLYG 217
Query: 123 SVQA---YVHVRDVALAHILVYETPSASGRYLCAESVLHRG-EVVEILAKFFPEYPIPTK 178
+ ++H D + + YL EV+E++ + +
Sbjct: 218 EGKNVRDWIHTNDHSTGVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYD 277
Query: 179 CSDEKNPRKKPYKFSNQKLK-DLGLE--FTPVKQCLYETVK 216
++ Y KL+ +LG FT + L ET++
Sbjct: 278 HVTDRAGHDLRYAIDASKLRDELGWTPQFTDFSEGLEETIQ 318
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 43.0 bits (100), Expect = 1e-05
Identities = 25/217 (11%), Positives = 65/217 (29%), Gaps = 14/217 (6%)
Query: 9 TKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKA 68
+ N+I AA ++R + SS +V S + ++ + K
Sbjct: 111 SFNMIEAARINGIKRFFYASSACIYPEFKQLETTNV---SLKESDAWPAEPQDAFGLEKL 167
Query: 69 VAEKAAWEEAVARGVDLVVVNPVLVLGP-------LLQSTVNASIIHILKYLNGSAKTYA 121
E+ G++ + + GP ++
Sbjct: 168 ATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDG 227
Query: 122 NSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTKCSD 181
+++ + + + + ++ + ++ ++ E+ E++ F +
Sbjct: 228 LQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPG 287
Query: 182 EKNPRKKPYKFSNQKLK-DLGLE-FTPVKQCLYETVK 216
+ R + N +K LG +K+ L T
Sbjct: 288 PEGVRGR--NSDNNLIKEKLGWAPNMRLKEGLRITYF 322
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.3 bits (93), Expect = 9e-05
Identities = 13/94 (13%), Positives = 23/94 (24%), Gaps = 13/94 (13%)
Query: 6 VIGTKNVIVAAAEAKVR---RVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNW 62
+GT ++ A + + S+ +Y P E ++
Sbjct: 107 GVGTLRLLDAVKTCGLINSVKFYQAST-SELYGKVQEIP---QKE------TTPFYPRSP 156
Query: 63 YCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGP 96
Y K A A + V P
Sbjct: 157 YGAAKLYAYWIVVNFREAYNLFAVNGILFNHESP 190
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 36.1 bits (82), Expect = 0.003
Identities = 23/223 (10%), Positives = 61/223 (27%), Gaps = 20/223 (8%)
Query: 6 VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCY 65
+G +++ A + + +S ++ + DE+ ++ Y
Sbjct: 100 GLGVTHLLEAIRQFSPETRFYQASTSEMF---GLIQAERQDENTP------FYPRSPYGV 150
Query: 66 GKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASII--HILKYLNGSAKTYA-- 121
K + G+ PL + + + G +
Sbjct: 151 AKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLG 210
Query: 122 --NSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTKC 179
++ + + D A L+ + A + ++ +I +
Sbjct: 211 NVDAKRDWGFAGDYVEAMWLMLQQDKADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLK 270
Query: 180 SDEKNPRK---KPYKFSNQKLK-DLGLEF-TPVKQCLYETVKS 217
D R + K + LG + T + + + V++
Sbjct: 271 IDPAFFRPAEVDVLLGNPAKAQRVLGWKPRTSLDELIRMMVEA 313
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 239 | |||
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 100.0 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 100.0 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 100.0 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 100.0 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 100.0 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 100.0 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 100.0 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 99.98 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 99.98 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.97 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 99.97 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.97 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 99.97 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.96 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.96 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.96 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.96 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.96 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.93 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.93 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.92 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 99.91 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.84 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.54 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.54 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.47 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.46 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.42 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.28 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.09 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 98.07 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 97.84 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 97.82 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 97.79 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 97.77 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 97.77 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 97.71 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 97.69 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 97.66 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 97.58 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 97.58 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 97.56 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 97.56 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 97.55 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 97.55 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 97.53 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 97.5 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 97.48 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 97.46 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 97.45 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 97.41 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 97.4 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 97.37 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 97.37 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 97.36 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 97.36 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 97.34 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 97.29 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 97.28 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 97.25 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 97.24 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 97.23 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 97.16 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 97.08 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 97.07 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 97.03 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 97.03 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 96.99 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 96.96 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 96.9 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 96.89 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 96.83 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 96.83 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 96.82 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 96.78 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 96.72 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 96.64 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 96.62 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 96.52 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 96.51 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 96.43 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 96.39 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 96.35 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 96.35 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 95.99 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 95.97 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 95.95 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 95.78 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 95.33 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 94.92 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 94.81 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 94.59 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 94.06 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 92.99 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 90.84 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 82.69 |
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=100.00 E-value=2.6e-37 Score=247.04 Aligned_cols=208 Identities=22% Similarity=0.261 Sum_probs=175.3
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+++|+.|+.+|+++|.+.++++|||+|| .++||..... +++|+++ ..|.++|+.+|.++|.+++.++++.
T Consensus 100 ~~~N~~gt~~ll~~~~~~~~~~~I~~Ss-~~~yg~~~~~---~~~E~~~------~~p~~~Y~~sK~~~E~~~~~~~~~~ 169 (322)
T d1r6da_ 100 TETNVQGTQTLLQCAVDAGVGRVVHVST-NQVYGSIDSG---SWTESSP------LEPNSPYAASKAGSDLVARAYHRTY 169 (322)
T ss_dssp HHHHTHHHHHHHHHHHHTTCCEEEEEEE-GGGGCCCSSS---CBCTTSC------CCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHcCCceEEEeec-ceeecCCCCC---CCCCCCC------CCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 4689999999999999999999999999 5999887665 7899887 3668999999999999999999999
Q ss_pred CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCc-cC--CCCCCceehHHHHHHHHHhhcCCCCCceEEEe-cCCC
Q 026418 82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKT-YA--NSVQAYVHVRDVALAHILVYETPSASGRYLCA-ESVL 157 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~ 157 (239)
+++++++||+++|||++... .....++.++..|+++. ++ ...++|+|++|+|+++..++++...+++||++ +.++
T Consensus 170 ~~~~~~lR~~~vyGp~~~~~-~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~~~~~~~~~~ni~~~~~~ 248 (322)
T d1r6da_ 170 GLDVRITRCCNNYGPYQHPE-KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGRAGEIYHIGGGLEL 248 (322)
T ss_dssp CCCEEEEEECEEECTTCCTT-SHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCCTTCEEEECCCCEE
T ss_pred CCCEEEEEeeeEECcCCCcC-cHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHHHHHhCCCCCCeeEEeecccc
Confidence 99999999999999987544 34556778888888765 44 45779999999999999999987776699887 8999
Q ss_pred CHHHHHHHHHHhCCCCCCCC-CCCCCCCCCCCCcccChHHHHh-hCCce-eCHHHHHHHHHHHHHHc
Q 026418 158 HRGEVVEILAKFFPEYPIPT-KCSDEKNPRKKPYKFSNQKLKD-LGLEF-TPVKQCLYETVKSLQEK 221 (239)
Q Consensus 158 s~~el~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~k~~~-lg~~p-~~~~e~i~~~~~~~~~~ 221 (239)
++.|+++.+.+.+ +...+. ..............+|++|+++ |||+| ++++|+|+++++|++++
T Consensus 249 s~~e~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~eegI~~~i~w~~~n 314 (322)
T d1r6da_ 249 TNRELTGILLDSL-GADWSSVRKVADRKGHDLRYSLDGGKIERELGYRPQVSFADGLARTVRWYREN 314 (322)
T ss_dssp EHHHHHHHHHHHH-TCCGGGEEEECCCTTCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHh-CCCccceeecCCCCCCCceeeeCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHh
Confidence 9999999999997 443332 1222334455678899999976 89999 89999999999999974
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-35 Score=236.06 Aligned_cols=212 Identities=21% Similarity=0.272 Sum_probs=173.9
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+++|+.|+.+|+++|++.++ ++||+|| .++|+..... +++|+..... .+..|.++|+.+|.++|.+++.++++.
T Consensus 89 ~~~Nv~g~~~ll~~~~~~~~-k~I~~SS-~~vy~~~~~~---~~~e~~~~~~-~~~~p~~~Y~~sK~~~E~~~~~~~~~~ 162 (312)
T d2b69a1 89 LKTNTIGTLNMLGLAKRVGA-RLLLAST-SEVYGDPEVH---PQSEDYWGHV-NPIGPRACYDEGKRVAETMCYAYMKQE 162 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHTC-EEEEEEE-GGGGBSCSSS---SBCTTCCCBC-CSSSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCC-cEEEEEC-hheecCCCCC---CCCccccCCC-CCCCCccHHHHHHHHHHHHHHHHHHHh
Confidence 57899999999999999986 8999999 5999987655 6777654322 224678999999999999999999999
Q ss_pred CccEEEEecCcccCCCCCCCC-ChhHHHHHHHHcCCCCc-cC--CCCCCceehHHHHHHHHHhhcCCCCCceEEEe-cCC
Q 026418 82 GVDLVVVNPVLVLGPLLQSTV-NASIIHILKYLNGSAKT-YA--NSVQAYVHVRDVALAHILVYETPSASGRYLCA-ESV 156 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~-~~--~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~ 156 (239)
|++++++||+++|||+..... .....++.++..|+++. ++ ...++|+|++|++++++.+++.. ..++||++ +..
T Consensus 163 ~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~~~~-~~~~~n~~~~~~ 241 (312)
T d2b69a1 163 GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN-VSSPVNLGNPEE 241 (312)
T ss_dssp CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSS-CCSCEEESCCCE
T ss_pred CCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHHhhc-cCCceEecCCcc
Confidence 999999999999999876543 34456778888898865 34 45679999999999999998754 45688877 899
Q ss_pred CCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcccChHHHHh-hCCce-eCHHHHHHHHHHHHHHc
Q 026418 157 LHRGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKD-LGLEF-TPVKQCLYETVKSLQEK 221 (239)
Q Consensus 157 ~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p-~~~~e~i~~~~~~~~~~ 221 (239)
+++.++++.+++.+ +...+....+..........+|++|+++ |||+| ++++++|+++++||+++
T Consensus 242 ~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~p~~~l~~~I~~~i~w~~~~ 307 (312)
T d2b69a1 242 HTILEFAQLIKNLV-GSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKE 307 (312)
T ss_dssp EEHHHHHHHHHHHH-TCCCCEEEECCCTTCCCCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred cchhhHHHHHHHHh-CCCCceEECCCCCCCCCeeeECHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
Confidence 99999999999997 5555555445455566678889999976 89999 99999999999999753
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=2.8e-34 Score=231.05 Aligned_cols=209 Identities=15% Similarity=0.074 Sum_probs=170.2
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+++|+.|+.+|+++|++.++++|||+|| .++||..... +.+|+++. .|.+.|+.+|.++|++++.++++.
T Consensus 115 ~~~Nv~gt~~ll~~~~~~~~~~~i~~SS-~~vyg~~~~~---~~~E~~~~------~p~~~Y~~sK~~~E~~~~~~~~~~ 184 (341)
T d1sb8a_ 115 NATNIDGFLNMLIAARDAKVQSFTYAAS-SSTYGDHPGL---PKVEDTIG------KPLSPYAVTKYVNELYADVFSRCY 184 (341)
T ss_dssp HHHHTHHHHHHHHHHHHTTCSEEEEEEE-GGGGTTCCCS---SBCTTCCC------CCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred hheeehhHHHHHHHHHhcCCceEEEccc-ceeeCCCCCC---CccCCCCC------CCCCcchHHHHHHHHHHHHHHHHh
Confidence 5689999999999999999999999999 5999977655 78999873 568999999999999999999999
Q ss_pred CccEEEEecCcccCCCCCCCCC---hhHHHHHHHHcCCCCc-cC--CCCCCceehHHHHHHHHHhhcCCC-CCc-eEEEe
Q 026418 82 GVDLVVVNPVLVLGPLLQSTVN---ASIIHILKYLNGSAKT-YA--NSVQAYVHVRDVALAHILVYETPS-ASG-RYLCA 153 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~~~---~~~~~~~~~~~~~~~~-~~--~~~~~~i~v~D~a~~~~~~~~~~~-~~~-~y~~~ 153 (239)
+++++++||+++||++..+... .....+..++.|+++. ++ ...++|+||+|+|.++..++.... ..+ +|+++
T Consensus 185 ~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a~~~~~~~~~~~~~~~~~~~ 264 (341)
T d1sb8a_ 185 GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLDARNQVYNIA 264 (341)
T ss_dssp CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGGGCSEEEEES
T ss_pred CCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccchhhhhhhhccccccceeeeec
Confidence 9999999999999998765432 3345668888888765 44 457899999999999999887653 233 88877
Q ss_pred -cCCCCHHHHHHHHHHhCCCCCCCCC----CCCCCCCCCCCcccChHHHHh-hCCce-eCHHHHHHHHHHHHHH
Q 026418 154 -ESVLHRGEVVEILAKFFPEYPIPTK----CSDEKNPRKKPYKFSNQKLKD-LGLEF-TPVKQCLYETVKSLQE 220 (239)
Q Consensus 154 -~~~~s~~el~~~i~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~k~~~-lg~~p-~~~~e~i~~~~~~~~~ 220 (239)
+..+|+.|+++.+.+.++...+... .............+|++|+++ |||+| ++++++|+++++||+.
T Consensus 265 ~~~~~si~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~LGw~p~~sl~~gi~~ti~wy~~ 338 (341)
T d1sb8a_ 265 VGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFREGDVRHSLADISKAAKLLGYAPKYDVSAGVALAMPWYIM 338 (341)
T ss_dssp CSCCEEHHHHHHHHHHHHHHTTCCCCCCCEEECCCTTCCSBCCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHH
T ss_pred ccccchHHHHHHHHHHHhccccccccccccccCCCCCCcCeeeeCHHHHHHHHCCCcCCCHHHHHHHHHHHHHH
Confidence 7899999999999998732222211 112233445567889999987 89999 9999999999999986
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=6.3e-33 Score=224.42 Aligned_cols=207 Identities=14% Similarity=0.074 Sum_probs=159.2
Q ss_pred chhHhHHHHHHHHHHHhcCC---CEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKV---RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA 78 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v---~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~ 78 (239)
+++|+.||.||+++|++.++ ++|||+|| +++||.+... +++|+++. .|.++|+.+|+++|++++.++
T Consensus 102 ~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS-~~vYG~~~~~---~~~E~~~~------~P~~~Y~~sK~~~E~~~~~~~ 171 (357)
T d1db3a_ 102 ADVDAMGTLRLLEAIRFLGLEKKTRFYQAST-SELYGLVQEI---PQKETTPF------YPRSPYAVAKLYAYWITVNYR 171 (357)
T ss_dssp HHHHTHHHHHHHHHHHHTTCTTTCEEEEEEE-GGGGTTCCSS---SBCTTSCC------CCCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCcEEEEEEc-hhhhCCCCCC---CcCCCCCC------CCCChHHHHHHHHHHHHHHHH
Confidence 57899999999999999874 47999999 6999876554 89999873 568999999999999999999
Q ss_pred HHcCccEEEEecCcccCCCCCCCCC--hhHHHHHHHHcCCCCc--cC--CCCCCceehHHHHHHHHHhhcCCCCCceEEE
Q 026418 79 VARGVDLVVVNPVLVLGPLLQSTVN--ASIIHILKYLNGSAKT--YA--NSVQAYVHVRDVALAHILVYETPSASGRYLC 152 (239)
Q Consensus 79 ~~~~~~~~i~Rp~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~--~~--~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~ 152 (239)
++.+++++++||+++|||....... .....+..+..+.... +| +..++|+|++|+|++++.++++. .+++||+
T Consensus 172 ~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~~~~~~~~-~~~~yni 250 (357)
T d1db3a_ 172 ESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQE-QPEDFVI 250 (357)
T ss_dssp HHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTSSS-SCCCEEE
T ss_pred HHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHHHHHHHhCC-CCCeEEE
Confidence 9999999999999999997543322 2234445555665533 34 45679999999999999999864 4468987
Q ss_pred e-cCCCCHHHHHHHHHHhCCCCCC---------------------CCCCCC----------CCCCCCCCcccChHHHHh-
Q 026418 153 A-ESVLHRGEVVEILAKFFPEYPI---------------------PTKCSD----------EKNPRKKPYKFSNQKLKD- 199 (239)
Q Consensus 153 ~-~~~~s~~el~~~i~~~~~~~~~---------------------~~~~~~----------~~~~~~~~~~~~~~k~~~- 199 (239)
+ |+.+|++|+++.+.+.+ +... +..... .+........+|++|+++
T Consensus 251 ~sg~~~s~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~d~skakk~ 329 (357)
T d1db3a_ 251 ATGVQYSVRQFVEMAAAQL-GIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAEVETLLGDPTKAHEK 329 (357)
T ss_dssp CCCCCEEHHHHHHHHHHTT-TEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEECGGGCCCCC-CCCCBCCHHHHHH
T ss_pred CCCCceehHHHHHHHHHHh-CCccccccccccccchhhhhhcccccccccCceeEeeccccCCCccccccccCHHHHHHH
Confidence 7 89999999999999986 2110 000000 012234456789999976
Q ss_pred hCCce-eCHHHHHHHHHHHHHH
Q 026418 200 LGLEF-TPVKQCLYETVKSLQE 220 (239)
Q Consensus 200 lg~~p-~~~~e~i~~~~~~~~~ 220 (239)
|||+| ++++|+|++++++.++
T Consensus 330 LGw~P~~sl~egI~~~I~~~l~ 351 (357)
T d1db3a_ 330 LGWKPEITLREMVSEMVANDLE 351 (357)
T ss_dssp HCCCCCSCHHHHHHHHHHHHHH
T ss_pred HCCCcCCCHHHHHHHHHHHHHH
Confidence 89999 9999999999876543
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=100.00 E-value=2.8e-33 Score=226.72 Aligned_cols=215 Identities=18% Similarity=0.174 Sum_probs=167.3
Q ss_pred chhHhHHHHHHHHHHHhcC---------CCEEEEccchhhhccCCCCCCCccccCCC---CCC-hhhcccCCchHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK---------VRRVVFTSSIGAVYMDPNRSPDDVVDESC---WSD-LEFCKNTKNWYCYGKA 68 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~---------v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~---~~~-~~~~~~~~~~Y~~sK~ 68 (239)
+++|+.||.+++++|++.+ +++|||+|| +++||..... +..|+. +.. ...+..|.+.|+.+|.
T Consensus 97 ~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS-~~vyg~~~~~---~~~~~~~~~~~~~e~~~~~p~s~Yg~sK~ 172 (361)
T d1kewa_ 97 IETNIVGTYALLEVARKYWSALGEDKKNNFRFHHIST-DEVYGDLPHP---DEVENSVTLPLFTETTAYAPSSPYSASKA 172 (361)
T ss_dssp HHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEE-GGGGCCCCCG---GGSCTTSCCCCBCTTSCCCCCSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEecc-ceeeCCCccC---CccccccCCCCcccCCCCCCCCHHHHHHH
Confidence 5789999999999998864 458999999 5999876543 222221 111 1122467899999999
Q ss_pred HHHHHHHHHHHHcCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCc-cC--CCCCCceehHHHHHHHHHhhcCCC
Q 026418 69 VAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKT-YA--NSVQAYVHVRDVALAHILVYETPS 145 (239)
Q Consensus 69 ~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~i~v~D~a~~~~~~~~~~~ 145 (239)
++|.+++.+.++.+++++++||+++|||++... .....++.++.+|+++. ++ +..++|+|++|+|+++..++++..
T Consensus 173 ~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~-~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v~D~a~ai~~~~~~~~ 251 (361)
T d1kewa_ 173 SSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPE-KLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEGK 251 (361)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT-SHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHhCCCEEEEecCceECcCCCcC-cHHHHHHHHHHcCCCcEEeCCCCeEEeCEEHHHHHHHHHHHHhcCC
Confidence 999999999999999999999999999987543 34456778888888765 44 467899999999999999998877
Q ss_pred CCceEEEe-cCCCCHHHHHHHHHHhCC-------CCCCCCCCCCCCCCCCCCcccChHHHHh-hCCce-eCHHHHHHHHH
Q 026418 146 ASGRYLCA-ESVLHRGEVVEILAKFFP-------EYPIPTKCSDEKNPRKKPYKFSNQKLKD-LGLEF-TPVKQCLYETV 215 (239)
Q Consensus 146 ~~~~y~~~-~~~~s~~el~~~i~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p-~~~~e~i~~~~ 215 (239)
.+++||++ +..+++.|+++.+.+.++ +.................+.+|++|+++ |||+| ++++|+|++++
T Consensus 252 ~~~~~Ni~s~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~P~~~l~e~i~~ti 331 (361)
T d1kewa_ 252 AGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDAGKISRELGWKPLETFESGIRKTV 331 (361)
T ss_dssp TTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGGGEEEECCCTTCCCBCCBCCHHHHHHHCCCCSCCHHHHHHHHH
T ss_pred CCCeEEECCCCCcchHHHHhHhhhhcccccccccCcccceeecCCCCCCCceeeeCHHHHHHHHCCCCCCCHHHHHHHHH
Confidence 66699887 788999999999988651 1111111222233455678899999976 89999 99999999999
Q ss_pred HHHHHc
Q 026418 216 KSLQEK 221 (239)
Q Consensus 216 ~~~~~~ 221 (239)
+||+.+
T Consensus 332 ~w~~~n 337 (361)
T d1kewa_ 332 EWYLAN 337 (361)
T ss_dssp HHHHHC
T ss_pred HHHHHh
Confidence 999876
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2.5e-32 Score=217.22 Aligned_cols=214 Identities=19% Similarity=0.177 Sum_probs=162.7
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
++.|+.||.+|+++|+++++++|||+|| .++||..... +++|+.+..... ..+.++|+.+|.++|++++.+.++.
T Consensus 79 ~~~Nv~gt~~ll~~a~~~~v~~~i~~SS-~~vyg~~~~~---~~~E~~~~~~~~-~~~~~~Y~~sK~~~E~~~~~~~~~~ 153 (315)
T d1e6ua_ 79 IYQNMMIESNIIHAAHQNDVNKLLFLGS-SCIYPKLAKQ---PMAESELLQGTL-EPTNEPYAIAKIAGIKLCESYNRQY 153 (315)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEECC-GGGSCTTCCS---SBCGGGTTSSCC-CGGGHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEECC-ceEcCCCCCC---CccCCccccCCC-CCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 4689999999999999999999999999 5999876654 778876554321 2345679999999999999999999
Q ss_pred CccEEEEecCcccCCCCCCCCC---hhH-----HHHHHHHcCCCCc-cC--CCCCCceehHHHHHHHHHhhcCCC-----
Q 026418 82 GVDLVVVNPVLVLGPLLQSTVN---ASI-----IHILKYLNGSAKT-YA--NSVQAYVHVRDVALAHILVYETPS----- 145 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~~~---~~~-----~~~~~~~~~~~~~-~~--~~~~~~i~v~D~a~~~~~~~~~~~----- 145 (239)
|++++++||+++|||+...... ... ........+.... ++ ...++|+|++|+++++..++.+..
T Consensus 154 gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~~~~~~~~~~~~~~~~~ 233 (315)
T d1e6ua_ 154 GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLE 233 (315)
T ss_dssp CCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHHHHSCHHHHHH
T ss_pred CCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhHHHHHHhhhhccccccc
Confidence 9999999999999997654321 111 1123333444433 34 456899999999999999885442
Q ss_pred ----CCceEEEe-cCCCCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcccChHHHHhhCCce-eCHHHHHHHHHHHHH
Q 026418 146 ----ASGRYLCA-ESVLHRGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKDLGLEF-TPVKQCLYETVKSLQ 219 (239)
Q Consensus 146 ----~~~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~p-~~~~e~i~~~~~~~~ 219 (239)
..+.++.+ +...++.++++.+.+.+ +..........+........+|++|+++|||+| ++++|+|+++++||+
T Consensus 234 ~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~-~~~~~i~~~~~~~~~~~~~~~d~sk~k~Lg~~p~~~l~e~i~~ti~w~~ 312 (315)
T d1e6ua_ 234 NTQPMLSHINVGTGVDCTIRELAQTIAKVV-GYKGRVVFDASKPDGTPRKLLDVTRLHQLGWYHEISLEAGLASTYQWFL 312 (315)
T ss_dssp TSBTTBCCEEESCSCCEEHHHHHHHHHHHH-TCCSEEEEETTSCCCCSBCCBCCHHHHHTTCCCCCCHHHHHHHHHHHHH
T ss_pred cccccccccccCCCcchHHHHHHHHHHHHh-CCCcceEECCCCCCCCceeccCHHHHHHcCCCCCCCHHHHHHHHHHHHH
Confidence 12266665 88899999999999986 444433333333334455678999999999999 999999999999998
Q ss_pred Hc
Q 026418 220 EK 221 (239)
Q Consensus 220 ~~ 221 (239)
++
T Consensus 313 ~N 314 (315)
T d1e6ua_ 313 EN 314 (315)
T ss_dssp HT
T ss_pred Hc
Confidence 65
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=100.00 E-value=8.3e-32 Score=216.95 Aligned_cols=211 Identities=19% Similarity=0.229 Sum_probs=165.1
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCC---------CCccccCCCCCChhhcccCCchHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRS---------PDDVVDESCWSDLEFCKNTKNWYCYGKAVAEK 72 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~---------~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~ 72 (239)
+++|+.|+.|++++|.+.+. ++|++|| +++||..... +....+|+++ ..|.+.|+.+|.++|.
T Consensus 97 ~~~N~~g~~nll~~~~~~~~-k~i~~ss-~~vyg~~~~~~~~~~~~~~~~~~~~e~~~------~~p~s~Y~~sK~~~E~ 168 (346)
T d1oc2a_ 97 IHTNFIGTYTLLEAARKYDI-RFHHVST-DEVYGDLPLREDLPGHGEGPGEKFTAETN------YNPSSPYSSTKAASDL 168 (346)
T ss_dssp HHHHTHHHHHHHHHHHHHTC-EEEEEEE-GGGGCCBCCGGGSTTTTCSTTSSBCTTSC------CCCCSHHHHHHHHHHH
T ss_pred eeeehHhHHhhhhhhccccc-ccccccc-ceEecccCccccccccccCcccccccCCC------CCCCCHHHHHHHHHHH
Confidence 57899999999999999985 7999999 5999753211 1112333333 4678999999999999
Q ss_pred HHHHHHHHcCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCc-c--CCCCCCceehHHHHHHHHHhhcCCCCCce
Q 026418 73 AAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKT-Y--ANSVQAYVHVRDVALAHILVYETPSASGR 149 (239)
Q Consensus 73 ~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~~ 149 (239)
+++.+++.++++++++||+++|||+.... ......+.....|..+. + ++..++|+|++|+|++++.++.++..++.
T Consensus 169 ~~~~~~~~~~i~~~ilR~~~vyGp~~~~~-~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~~~~~~~~~~~~~ 247 (346)
T d1oc2a_ 169 IVKAWVRSFGVKATISNCSNNYGPYQHIE-KFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKGRMGET 247 (346)
T ss_dssp HHHHHHHHHCCEEEEEEECCEESTTCCTT-SHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHHHCCTTCE
T ss_pred HHHHHHHHcCCCEEEEeecceeCCCCCcc-chhHHHHHHHHcCCceeEeCCCCccccccchhhHHHHHHHHHhhcccCcc
Confidence 99999999999999999999999976543 34445566667776654 4 45678999999999999999988877777
Q ss_pred EEEe-cCCCCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcccChHHHHh-hCCce-e-CHHHHHHHHHHHHHHc
Q 026418 150 YLCA-ESVLHRGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKD-LGLEF-T-PVKQCLYETVKSLQEK 221 (239)
Q Consensus 150 y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p-~-~~~e~i~~~~~~~~~~ 221 (239)
|+++ +++.++.++++.+.+.++....................+|++|+++ |||+| . +++++|+++++|++++
T Consensus 248 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~LGw~P~~t~l~e~i~~ti~w~~~n 323 (346)
T d1oc2a_ 248 YLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDRAGHDLRYAIDASKLRDELGWTPQFTDFSEGLEETIQWYTDN 323 (346)
T ss_dssp EEECCSCEEEHHHHHHHHHHHTTCCTTCSEEECCCTTCCCBCCBCCHHHHHHHCCCCSCCCHHHHHHHHHHHHHHT
T ss_pred ccccccccccchHHHHHHHHHhCCCCcceEECCCCCCCCceeeeCHHHHHHHHCCCCcCCCHHHHHHHHHHHHHHH
Confidence 7655 8999999999999999844333333333334445567789999976 99999 4 6999999999999975
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.98 E-value=9.9e-32 Score=217.80 Aligned_cols=213 Identities=12% Similarity=0.106 Sum_probs=163.2
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCC-ChhhcccCCchHHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWS-DLEFCKNTKNWYCYGKAVAEKAAWEEAVA 80 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~-~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 80 (239)
+..|+.+|.+++++|+++++++|||+|| ..+|+..... +.+|.... ....+..|.+.|+.+|.++|++++.+.+.
T Consensus 104 ~~~n~~gt~~ll~~~~~~~vk~~i~~SS-~~~~~~~~~~---~~~~~~~~~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~ 179 (363)
T d2c5aa1 104 MYNNTMISFNMIEAARINGIKRFFYASS-ACIYPEFKQL---ETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKD 179 (363)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEEEE-GGGSCGGGSS---SSSSCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred cccccchhhHHHHhHHhhCccccccccc-cccccccccc---cccccccccccCCcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 4679999999999999999999999999 5999876654 44443322 22233567899999999999999999999
Q ss_pred cCccEEEEecCcccCCCCCCCCChh---HH-HHHHHHcCCCC-ccC--CCCCCceehHHHHHHHHHhhcCCCCCceEEEe
Q 026418 81 RGVDLVVVNPVLVLGPLLQSTVNAS---II-HILKYLNGSAK-TYA--NSVQAYVHVRDVALAHILVYETPSASGRYLCA 153 (239)
Q Consensus 81 ~~~~~~i~Rp~~v~G~~~~~~~~~~---~~-~~~~~~~~~~~-~~~--~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~ 153 (239)
+|++++++||+++||+++....... .. ........... .++ ...++|+|++|+++++..+++.. .+++||++
T Consensus 180 ~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~~~~~~~~~-~~~~~ni~ 258 (363)
T d2c5aa1 180 FGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSD-FREPVNIG 258 (363)
T ss_dssp HCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHHSS-CCSCEEEC
T ss_pred hCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHHHHHHHHHhCC-CCCeEEEe
Confidence 9999999999999998765432211 11 22223333332 344 45789999999999999998754 45689876
Q ss_pred -cCCCCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcccChHHHHh-hCCce-eCHHHHHHHHHHHHHHc
Q 026418 154 -ESVLHRGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKD-LGLEF-TPVKQCLYETVKSLQEK 221 (239)
Q Consensus 154 -~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p-~~~~e~i~~~~~~~~~~ 221 (239)
+..+|+.|+++++.+.+ +...+....+. ........+|++|+++ |||+| ++++++|+++++||+++
T Consensus 259 ~~~~~s~~~l~~~i~~~~-g~~~~i~~~~~-~~~~~~~~~d~ska~~~LGw~p~~sleegi~~ti~w~~~~ 327 (363)
T d2c5aa1 259 SDEMVSMNEMAEMVLSFE-EKKLPIHHIPG-PEGVRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWIKEQ 327 (363)
T ss_dssp CCCCEEHHHHHHHHHHTT-TCCCCEEEECC-CCCCSBCEECCHHHHHHHSCCCCCCHHHHHHHHHHHHHHH
T ss_pred cCCcccHHHHHHHHHHHh-CCCCceEeCCC-CCCccccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHH
Confidence 89999999999999986 65555444332 2345567789999977 89999 99999999999999764
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.98 E-value=2.8e-31 Score=211.65 Aligned_cols=207 Identities=12% Similarity=0.010 Sum_probs=161.8
Q ss_pred chhHhHHHHHHHHHHHhcC-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA 80 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 80 (239)
++.|+.|+.+++++|++.+ .++|++.|| +++|+..... +.+|+++. .|.+.|+.+|.++|.++..+.++
T Consensus 96 ~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss-~~~~~~~~~~---~~~E~~~~------~p~~~Y~~sK~~~E~~~~~~~~~ 165 (321)
T d1rpna_ 96 GVVDGLGVTHLLEAIRQFSPETRFYQAST-SEMFGLIQAE---RQDENTPF------YPRSPYGVAKLYGHWITVNYRES 165 (321)
T ss_dssp HHHHTHHHHHHHHHHHHHCTTSEEEEEEE-GGGGCSCSSS---SBCTTSCC------CCCSHHHHHHHHHHHHHHHHHHH
T ss_pred HhhhhhchHHHHHHHHHhCCCcccccccc-hhhcCcccCC---CCCCCCCc------cccChhHHHHHHHHHHHHHHHhh
Confidence 5689999999999999999 567888888 6899877655 67888763 56899999999999999999999
Q ss_pred cCccEEEEecCcccCCCCCCCCC--hhHHHHHHHHcCCCCc--cC--CCCCCceehHHHHHHHHHhhcCCCCCceEEEe-
Q 026418 81 RGVDLVVVNPVLVLGPLLQSTVN--ASIIHILKYLNGSAKT--YA--NSVQAYVHVRDVALAHILVYETPSASGRYLCA- 153 (239)
Q Consensus 81 ~~~~~~i~Rp~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~--~~--~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~- 153 (239)
.+++++++||+++|||....... .....+.+...++.+. ++ +..++|+|++|+|+++.+++.++.. +.||++
T Consensus 166 ~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~~~~~~~~-~~~ni~~ 244 (321)
T d1rpna_ 166 FGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDKA-DDYVVAT 244 (321)
T ss_dssp HCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSSC-CCEEECC
T ss_pred cCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHHHHhcCCc-CCceecc
Confidence 99999999999999997544322 2233455555555433 44 4567899999999999999987653 567666
Q ss_pred cCCCCHHHHHHHHHHhCCCCCCCCCC----CCCCCCCCCCcccChHHHHh-hCCce-eCHHHHHHHHHHHHHH
Q 026418 154 ESVLHRGEVVEILAKFFPEYPIPTKC----SDEKNPRKKPYKFSNQKLKD-LGLEF-TPVKQCLYETVKSLQE 220 (239)
Q Consensus 154 ~~~~s~~el~~~i~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~k~~~-lg~~p-~~~~e~i~~~~~~~~~ 220 (239)
++..|+.++++.+.+.+ +...+... ...+.........|++|+++ |||+| ++++|+|++|++|+++
T Consensus 245 ~~~~s~~~~~~~~~~~~-~~~~~~~~~~~~~~~rp~~~~~~~~d~~k~~k~lG~~P~~~l~e~i~~tv~~~l~ 316 (321)
T d1rpna_ 245 GVTTTVRDMCQIAFEHV-GLDYRDFLKIDPAFFRPAEVDVLLGNPAKAQRVLGWKPRTSLDELIRMMVEADLR 316 (321)
T ss_dssp SCEEEHHHHHHHHHHTT-TCCGGGTEEECGGGCCSSCCCBCCBCTHHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred cccceehhhhHHHHHHh-CCCccceeecCCCCCCCCccCCccCCHHHHHHHHCCCcCCCHHHHHHHHHHHHHH
Confidence 89999999999999987 43322111 11122345567889999987 89999 9999999999999875
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=8.9e-31 Score=210.25 Aligned_cols=210 Identities=18% Similarity=0.170 Sum_probs=160.4
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHH-
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA- 80 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 80 (239)
+++|+.||.+||++|++.++++||++|| .++|+..... +..|.++. ..|.++|+.+|..+|+++.++...
T Consensus 97 ~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss-~~vy~~~~~~---~~~e~~~~-----~~p~~~Y~~sK~~~e~~~~~~~~~~ 167 (338)
T d1udca_ 97 YDNNVNGTLRLISAMRAANVKNFIFSSS-ATVYGDQPKI---PYVESFPT-----GTPQSPYGKSKLMVEQILTDLQKAQ 167 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEEEEE-GGGGCSCCSS---SBCTTSCC-----CCCSSHHHHHHHHHHHHHHHHHHHS
T ss_pred HHhHHHHHHHHHHHHHHhCCCEEEecCc-ceEEcccccc---cccccccc-----CCCcchHHHHHhhhhHHHHHHHhhc
Confidence 5789999999999999999999999999 5999776554 45554432 357899999999999999876655
Q ss_pred cCccEEEEecCcccCCCCCCCC--------C-hhHHHHHHHHcCCCCc--c--------CCCCCCceehHHHHHHHHHhh
Q 026418 81 RGVDLVVVNPVLVLGPLLQSTV--------N-ASIIHILKYLNGSAKT--Y--------ANSVQAYVHVRDVALAHILVY 141 (239)
Q Consensus 81 ~~~~~~i~Rp~~v~G~~~~~~~--------~-~~~~~~~~~~~~~~~~--~--------~~~~~~~i~v~D~a~~~~~~~ 141 (239)
.+++++++||+++||++..+.. . ....++.....+..+. + +...+||+|++|++.++..++
T Consensus 168 ~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~v~D~~~~~~~~~ 247 (338)
T d1udca_ 168 PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVVAM 247 (338)
T ss_dssp TTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHH
T ss_pred cCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEEEeehhhhccccc
Confidence 5899999999999998654211 1 2223334444433221 1 345688999999998887766
Q ss_pred cCCC--CC-ceEEEe-cCCCCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcccChHHHHh-hCCce-eCHHHHHHHHH
Q 026418 142 ETPS--AS-GRYLCA-ESVLHRGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKD-LGLEF-TPVKQCLYETV 215 (239)
Q Consensus 142 ~~~~--~~-~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p-~~~~e~i~~~~ 215 (239)
.... .. ++||++ +.++|+.|+++.+.+.+ +.+++....+..........+|++|+++ |||+| ++++++|++++
T Consensus 248 ~~~~~~~~~~i~Ni~~~~~~si~e~~~~i~~~~-g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgwkp~~~l~egi~~ti 326 (338)
T d1udca_ 248 EKLANKPGVHIYNLGAGVGNSVLDVVNAFSKAC-GKPVNYHFAPRREGDLPAYWADASKADRELNWRVTRTLDEMAQDTW 326 (338)
T ss_dssp HHHTTCCEEEEEEESCSSCEEHHHHHHHHHHHH-TSCCCEEEECCCTTCCSBCCBCCHHHHHHHCCCCCCCHHHHHHHHH
T ss_pred cccccccCcceeeecCCCCCcHHHHHHHHHHHH-CCCCceEECCCCCCCCCEeeECHHHHHHHHCCCcCCCHHHHHHHHH
Confidence 5322 22 389887 68899999999999996 6555555555444556678899999986 89999 99999999999
Q ss_pred HHHHHc
Q 026418 216 KSLQEK 221 (239)
Q Consensus 216 ~~~~~~ 221 (239)
+|++++
T Consensus 327 ~w~~~~ 332 (338)
T d1udca_ 327 HWQSRH 332 (338)
T ss_dssp HHHHHC
T ss_pred HHHHhc
Confidence 999987
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=4.9e-30 Score=206.46 Aligned_cols=206 Identities=14% Similarity=0.006 Sum_probs=155.4
Q ss_pred chhHhHHHHHHHHHHHhcCC---CEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKV---RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA 78 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v---~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~ 78 (239)
+++|+.||.+|+++|+++++ ++|||+|| +++||..... +++|+++. .|.++|+.+|.++|++++.+.
T Consensus 103 ~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS-~~vyg~~~~~---~~~E~~~~------~P~~~Yg~sK~~aE~~~~~~~ 172 (347)
T d1t2aa_ 103 ADVDGVGTLRLLDAVKTCGLINSVKFYQAST-SELYGKVQEI---PQKETTPF------YPRSPYGAAKLYAYWIVVNFR 172 (347)
T ss_dssp HHHHTHHHHHHHHHHHHTTCTTTCEEEEEEE-GGGTCSCSSS---SBCTTSCC------CCCSHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHcCCCCCcEEEEecc-hheecCCCCC---CCCCCCCC------CCCCHHHHHHHHHHHHHHHHH
Confidence 47899999999999999874 48999999 5999976655 78998873 568999999999999999999
Q ss_pred HHcCccEEEEecCcccCCCCCCCCChh--H-HHHHHHHcCCCCc-cC--CCCCCceehHHHHHHHHHhhcCCCCCceEEE
Q 026418 79 VARGVDLVVVNPVLVLGPLLQSTVNAS--I-IHILKYLNGSAKT-YA--NSVQAYVHVRDVALAHILVYETPSASGRYLC 152 (239)
Q Consensus 79 ~~~~~~~~i~Rp~~v~G~~~~~~~~~~--~-~~~~~~~~~~~~~-~~--~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~ 152 (239)
++.+++++++||+++|||......... . .++.....+.... ++ ...++|+|++|+++++..++.+... +.|+.
T Consensus 173 ~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~a~~~~~~~~~~-~~~~~ 251 (347)
T d1t2aa_ 173 EAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDEP-EDFVI 251 (347)
T ss_dssp HHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHSSSC-CCEEE
T ss_pred HHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEecHHHHHHHHHhhcCCC-cccee
Confidence 999999999999999999754432211 1 2223333444433 44 4568999999999999999987654 45655
Q ss_pred e-cCCCCHHHHHHHHHHhCCCCCCCCCCC---------------------CCCCCCCCCcccChHHHHh-hCCce-eCHH
Q 026418 153 A-ESVLHRGEVVEILAKFFPEYPIPTKCS---------------------DEKNPRKKPYKFSNQKLKD-LGLEF-TPVK 208 (239)
Q Consensus 153 ~-~~~~s~~el~~~i~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~k~~~-lg~~p-~~~~ 208 (239)
+ +...++.+..+.+...+ +..+..... ..+......+.+|++|+++ |||+| ++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~~~~~d~skak~~Lgw~P~~sl~ 330 (347)
T d1t2aa_ 252 ATGEVHSVREFVEKSFLHI-GKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVAFD 330 (347)
T ss_dssp CCSCCEEHHHHHHHHHHHT-TCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCCHHHHHHHCCCCCSCHH
T ss_pred ccccccccchhhhhhhhhh-cceeeecccchhhhhhhhhcCCceeeecccCCCCCCcCEeeECHHHHHHHHCCCcCCCHH
Confidence 4 78889999999888876 322111000 0112233456789999977 89999 9999
Q ss_pred HHHHHHHHHHH
Q 026418 209 QCLYETVKSLQ 219 (239)
Q Consensus 209 e~i~~~~~~~~ 219 (239)
|+|++++++.+
T Consensus 331 e~i~~~I~~~~ 341 (347)
T d1t2aa_ 331 ELVREMVHADV 341 (347)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999987644
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=2.9e-29 Score=201.96 Aligned_cols=211 Identities=18% Similarity=0.142 Sum_probs=158.8
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHH-
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA- 80 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 80 (239)
+++|+.||.+++++|++.++++|||+|| +.+|+..... ...++.+. ..+.++|+.+|..+|+.+.++.+.
T Consensus 105 ~~~Nv~gt~~l~~~~~~~~v~~~i~~ss-~~~~~~~~~~---~~~~~~~~-----~~~~~~Y~~~k~~~e~~~~~~~~~~ 175 (346)
T d1ek6a_ 105 YRVNLTGTIQLLEIMKAHGVKNLVFSSS-ATVYGNPQYL---PLDEAHPT-----GGCTNPYGKSKFFIEEMIRDLCQAD 175 (346)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEEEE-GGGGCSCSSS---SBCTTSCC-----CCCSSHHHHHHHHHHHHHHHHHHHC
T ss_pred HHhhhcccccccchhhhcCccccccccc-ceeeeccccc---cccccccc-----cccCChHHHHHHHHHHHHHHHHHhc
Confidence 5789999999999999999999999999 5999876644 22222211 246789999999999999998765
Q ss_pred cCccEEEEecCcccCCCCCCC--------CC-hhHHHHHHHHc-CCCC-------c--cCCCCCCceehHHHHHHHHHhh
Q 026418 81 RGVDLVVVNPVLVLGPLLQST--------VN-ASIIHILKYLN-GSAK-------T--YANSVQAYVHVRDVALAHILVY 141 (239)
Q Consensus 81 ~~~~~~i~Rp~~v~G~~~~~~--------~~-~~~~~~~~~~~-~~~~-------~--~~~~~~~~i~v~D~a~~~~~~~ 141 (239)
.+++++++||+++||+..... .. .....+..... +.++ . .+.+.+||+|++|+|.++..++
T Consensus 176 ~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~Rdfi~v~D~a~~~~~~~ 255 (346)
T d1ek6a_ 176 KTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAAL 255 (346)
T ss_dssp TTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHH
T ss_pred cCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCCeeEeEEEEEeccchhhhhc
Confidence 589999999999999864321 11 12222333332 2221 1 1345679999999999998876
Q ss_pred cCC--CCCc-eEEEe-cCCCCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcccChHHHHh-hCCce-eCHHHHHHHHH
Q 026418 142 ETP--SASG-RYLCA-ESVLHRGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKD-LGLEF-TPVKQCLYETV 215 (239)
Q Consensus 142 ~~~--~~~~-~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p-~~~~e~i~~~~ 215 (239)
... ...+ +||++ +..+++.|+++.|.+.+ +...+....+.+........+|++|+++ |||+| ++++|+|++++
T Consensus 256 ~~~~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~-~~~~~~~~~~~~~~e~~~~~~d~~k~~~~lgw~p~~slee~I~~~i 334 (346)
T d1ek6a_ 256 RKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKAS-GKKIPYKVVARREGDVAACYANPSLAQEELGWTAALGLDRMCEDLW 334 (346)
T ss_dssp HHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHH-CSCCCEEEECCCTTCCSEECBCCHHHHHTTCCCCCCCHHHHHHHHH
T ss_pred cccccccCceEEEeCCCCcccHHHHHHHHHHHh-CCCCCeEECCCCCCCCCEeeECHHHHHHHHCCCcCCCHHHHHHHHH
Confidence 433 2223 89887 78999999999999997 5555555555555566778889999977 89999 99999999999
Q ss_pred HHHHHcC
Q 026418 216 KSLQEKG 222 (239)
Q Consensus 216 ~~~~~~g 222 (239)
+|++++.
T Consensus 335 ~w~~~n~ 341 (346)
T d1ek6a_ 335 RWQKQNP 341 (346)
T ss_dssp HHHHHCT
T ss_pred HHHHhCH
Confidence 9999774
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=3.3e-29 Score=201.29 Aligned_cols=218 Identities=18% Similarity=0.203 Sum_probs=162.1
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChh-hcccCCchHHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLE-FCKNTKNWYCYGKAVAEKAAWEEAVA 80 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~-~~~~~~~~Y~~sK~~~E~~~~~~~~~ 80 (239)
++.|+.|+.+++++|.+.++ +++|.|| +.+|+..... ..+|..+.... ....|.+.|+.+|.++|++++.+.++
T Consensus 91 ~~~nv~gt~~ll~~~~~~~~-~~~~~ss-~~~~~~~~~~---~~~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~ 165 (342)
T d2blla1 91 FELDFEENLRIIRYCVKYRK-RIIFPST-SEVYGMCSDK---YFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEK 165 (342)
T ss_dssp HHHHTHHHHHHHHHHHHTTC-EEEEECC-GGGGBTCCCS---SBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccc-ccccccc-cccccccccc---ccccccccccccccCCCcchhhhcccchhhhhhhhhcc
Confidence 56899999999999999986 5778899 5888876654 44444433322 12356788999999999999999999
Q ss_pred cCccEEEEecCcccCCCCCCC-------CChhHHHHHHHHcCCCCc-c--CCCCCCceehHHHHHHHHHhhcCCC--CCc
Q 026418 81 RGVDLVVVNPVLVLGPLLQST-------VNASIIHILKYLNGSAKT-Y--ANSVQAYVHVRDVALAHILVYETPS--ASG 148 (239)
Q Consensus 81 ~~~~~~i~Rp~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~-~--~~~~~~~i~v~D~a~~~~~~~~~~~--~~~ 148 (239)
++++++++||+.+||+..... ......++.++++|+++. + |+..++|+|++|+|+++..+++++. ..|
T Consensus 166 ~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~~~~~~~~~~~~~g 245 (342)
T d2blla1 166 EGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDG 245 (342)
T ss_dssp HCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGGTTTT
T ss_pred cCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccccccceeeeehhhccccCCC
Confidence 999999999999999865432 113446678888888765 3 4567889999999999999998742 334
Q ss_pred -eEEEe-cC-CCCHHHHHHHHHHhCCCC----CCCCCC----------CCCCCCCCCCcccChHHHHh-hCCce-eCHHH
Q 026418 149 -RYLCA-ES-VLHRGEVVEILAKFFPEY----PIPTKC----------SDEKNPRKKPYKFSNQKLKD-LGLEF-TPVKQ 209 (239)
Q Consensus 149 -~y~~~-~~-~~s~~el~~~i~~~~~~~----~~~~~~----------~~~~~~~~~~~~~~~~k~~~-lg~~p-~~~~e 209 (239)
+||++ ++ .+|+.|+++.+.+.++.. .++... ............+|++|+++ |||+| ++++|
T Consensus 246 ~~~Nig~~~~~~t~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~P~~slee 325 (342)
T d2blla1 246 EIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQE 325 (342)
T ss_dssp EEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC------------CCCCCBCCHHHHHHHCCCCCCCHHH
T ss_pred eEEEEecccchhHHHHHHHHHHHHhCCCccccccCcccccceeccccccccccccccccccCHHHHHHHHCCCcCCCHHH
Confidence 99986 54 479999999999886211 111110 00111223456779999976 99999 99999
Q ss_pred HHHHHHHHHHHcCCC
Q 026418 210 CLYETVKSLQEKGHL 224 (239)
Q Consensus 210 ~i~~~~~~~~~~g~~ 224 (239)
+|+++++||+++-.|
T Consensus 326 gl~~ti~~y~~~~~~ 340 (342)
T d2blla1 326 TIDETLDFFLRTVDL 340 (342)
T ss_dssp HHHHHHHHHHHHSCT
T ss_pred HHHHHHHHHHhCcCC
Confidence 999999999887554
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.96 E-value=9e-29 Score=199.13 Aligned_cols=212 Identities=17% Similarity=0.160 Sum_probs=154.2
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCC-CCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRS-PDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA 80 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~-~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 80 (239)
..+|+.+|.+|+++|++.++++|||+|| ..+||..... ...+++|+.+ ..|.++|+.+|.++|++++++.+.
T Consensus 98 ~~~N~~~t~~ll~~~~~~~i~~~i~~SS-~~vyg~~~~~~~~~~~~e~~~------~~p~~~Y~~sK~~~E~~~~~~~~~ 170 (347)
T d1z45a2 98 YHNNILGTVVLLELMQQYNVSKFVFSSS-ATVYGDATRFPNMIPIPEECP------LGPTNPYGHTKYAIENILNDLYNS 170 (347)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEEEEE-GGGGCCGGGSTTCCSBCTTSC------CCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhhHHHHHHHHhcccceEEeecc-eeeecCcccCCCCCccccccC------CCCCChhHhHHHHHHHHHHHHHHh
Confidence 4689999999999999999999999999 5999876543 2235666655 456899999999999999998764
Q ss_pred --cCccEEEEecCcccCCCCCC--------CCChhHHHHHH-HHc-CCCCc-cCC--------CCCCceehHHHHHHHHH
Q 026418 81 --RGVDLVVVNPVLVLGPLLQS--------TVNASIIHILK-YLN-GSAKT-YAN--------SVQAYVHVRDVALAHIL 139 (239)
Q Consensus 81 --~~~~~~i~Rp~~v~G~~~~~--------~~~~~~~~~~~-~~~-~~~~~-~~~--------~~~~~i~v~D~a~~~~~ 139 (239)
.+++++++||+++||+.... ........+.. ... +.++. +++ ..+|++++.|++.+++.
T Consensus 171 ~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~~d~~~~~~~~~~~~~ 250 (347)
T d1z45a2 171 DKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHVVDLAKGHIA 250 (347)
T ss_dssp STTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEEHHHHHHHHHH
T ss_pred hccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCceeeeeeeeecccccccc
Confidence 47899999999999975322 11112223333 332 22222 332 34678888889998888
Q ss_pred hhcC------CCC-CceEEEe-cCCCCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcccChHHHHh-hCCce-eCHHH
Q 026418 140 VYET------PSA-SGRYLCA-ESVLHRGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKD-LGLEF-TPVKQ 209 (239)
Q Consensus 140 ~~~~------~~~-~~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p-~~~~e 209 (239)
+++. ... .++||++ +.++|+.|+++.+.+.+ +.+++....+.+........+|++|+++ |||+| ++++|
T Consensus 251 ~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~d~sk~~~~lGw~p~~~lee 329 (347)
T d1z45a2 251 ALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKAS-GIDLPYKVTGRRAGDVLNLTAKPDRAKRELKWQTELQVED 329 (347)
T ss_dssp HHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHH-TCCCCC---------CCCCCBCCHHHHHHTCCCCCCCHHH
T ss_pred cccccccccccccccccceecCCCcccHHHHHHHHHHHH-CCCCceEeCCCCCCCCCEeeECHHHHHHHHCCCCCCCHHH
Confidence 7652 112 2389887 89999999999999996 6666666555555556677889999977 99999 99999
Q ss_pred HHHHHHHHHHHc
Q 026418 210 CLYETVKSLQEK 221 (239)
Q Consensus 210 ~i~~~~~~~~~~ 221 (239)
+|+++++|++++
T Consensus 330 ~i~~ti~w~~~n 341 (347)
T d1z45a2 330 SCKDLWKWTTEN 341 (347)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHhC
Confidence 999999999988
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.96 E-value=6.2e-29 Score=202.65 Aligned_cols=216 Identities=21% Similarity=0.254 Sum_probs=159.9
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+++|+.+|.+++++|++.++++++++|| .++|+...... ...+..+...+.+..|.++|+.+|..+|++++.+.+..
T Consensus 117 ~~~N~~~t~~~l~~~~~~~~~~~~~~~s-~~~~~~~~~~~--~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~ 193 (383)
T d1gy8a_ 117 YDNNVVGILRLLQAMLLHKCDKIIFSSS-AAIFGNPTMGS--VSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY 193 (383)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEEEE-GGGTBSCCC-------CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccchhhhccCCcccccccc-ccccccccccc--ccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHh
Confidence 4689999999999999999999999999 58887654331 22333333333345789999999999999999999999
Q ss_pred CccEEEEecCcccCCCCCCCCC--------hhHHHHHHHHc----------------CCCCc-c--------CCCCCCce
Q 026418 82 GVDLVVVNPVLVLGPLLQSTVN--------ASIIHILKYLN----------------GSAKT-Y--------ANSVQAYV 128 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~~~--------~~~~~~~~~~~----------------~~~~~-~--------~~~~~~~i 128 (239)
|++++++||+++|||....... ....++.+++. +.+.. + |.+.+||+
T Consensus 194 gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi 273 (383)
T d1gy8a_ 194 GIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYV 273 (383)
T ss_dssp CCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEE
T ss_pred CCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhccccccchhhhhhhcCCceEEeCCccccCCCCeEEeeE
Confidence 9999999999999998654321 11222222221 11111 1 23457899
Q ss_pred ehHHHHHHHHHhhcCC--------C-CCceEEEe-cCCCCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcccChHHHH
Q 026418 129 HVRDVALAHILVYETP--------S-ASGRYLCA-ESVLHRGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLK 198 (239)
Q Consensus 129 ~v~D~a~~~~~~~~~~--------~-~~~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 198 (239)
|++|+|++++.++++. . ..++||++ +.++|+.|+++.+.+.+ +..++......+.........|++|++
T Consensus 274 ~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s~~el~~~i~~~~-~~~~~~~~~~~~~~d~~~~~~d~~k~~ 352 (383)
T d1gy8a_ 274 HVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEVARKTT-GHPIPVRECGRREGDPAYLVAASDKAR 352 (383)
T ss_dssp EHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHHHHHHHH-CCCCCEEEECCCTTCCSEECBCCHHHH
T ss_pred EHHHHHHHHHHHHhhhccccccccccCccEEEeCCCCceeHHHHHHHHHHHh-CCCCceEECCCCCCCcCEeeeCHHHHH
Confidence 9999999999988632 1 12389886 88999999999999996 555555555545555677888999997
Q ss_pred h-hCCce-eCHHHHHHHH-HHHHHHc
Q 026418 199 D-LGLEF-TPVKQCLYET-VKSLQEK 221 (239)
Q Consensus 199 ~-lg~~p-~~~~e~i~~~-~~~~~~~ 221 (239)
+ |||+| ++++|+|.++ +.|++.+
T Consensus 353 k~LGw~P~~~l~e~i~~t~~~w~~~~ 378 (383)
T d1gy8a_ 353 EVLGWKPKYDTLEAIMETSWKFQRTH 378 (383)
T ss_dssp HHTCCCCSCCSHHHHHHHHHHHHHTC
T ss_pred HHHCCccCCCHHHHHHHHHHHHHHhC
Confidence 7 99999 9999999887 5788765
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.96 E-value=1.1e-27 Score=192.47 Aligned_cols=216 Identities=24% Similarity=0.285 Sum_probs=158.6
Q ss_pred chhHhHHHHHHHHHHHhcC-CCEEEEccchhhhccCCCCCCCccccCCCCCCh----------hhcccCCchHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDL----------EFCKNTKNWYCYGKAVA 70 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~----------~~~~~~~~~Y~~sK~~~ 70 (239)
+..|+.||.+++++|.+.+ +++|||+||++++++..+.......+|+.+... ..+..|.++|+.+|..+
T Consensus 104 ~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 183 (342)
T d1y1pa1 104 VTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEA 183 (342)
T ss_dssp HHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHH
T ss_pred ccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCccccccccccccccccccccccCCCCCcCcccchhHhH
Confidence 4579999999999999975 999999999755554443333334555543211 12234567899999999
Q ss_pred HHHHHHHHHHc--CccEEEEecCcccCCCCCCC--CChhHHHHHHHHcCCCCcc--CCCCCCceehHHHHHHHHHhhcCC
Q 026418 71 EKAAWEEAVAR--GVDLVVVNPVLVLGPLLQST--VNASIIHILKYLNGSAKTY--ANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 71 E~~~~~~~~~~--~~~~~i~Rp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
|++++.+.++. +++++++||+++|||...+. ......++..+++|..... +.+.++|+|++|+|++++.++.++
T Consensus 184 E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~v~v~Dva~~~i~~l~~~ 263 (342)
T d1y1pa1 184 ELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVLP 263 (342)
T ss_dssp HHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHCT
T ss_pred HHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCcccCCccceeeeeHHHHHHHHHHhhcCc
Confidence 99999998775 47788999999999865432 2345567788888876543 566788999999999999999988
Q ss_pred CCCceE-EEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-CCcccChHHHHhhCCce-eCHHHHHHHHHHH
Q 026418 145 SASGRY-LCAESVLHRGEVVEILAKFFPEYPIPTKCSDEKNPRK-KPYKFSNQKLKDLGLEF-TPVKQCLYETVKS 217 (239)
Q Consensus 145 ~~~~~y-~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~k~~~lg~~p-~~~~e~i~~~~~~ 217 (239)
...|.| +++++.+|+.|++++|.+.+|...++........... .....+.++++.|||.+ ++++++|+++++.
T Consensus 264 ~~~g~~~~~~~~~~t~~eia~~i~k~~p~~~~~~~~~~~~~~~~~~~~~~s~~~~k~lg~~~~~~lee~i~d~I~s 339 (342)
T d1y1pa1 264 QIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPADFPDQGQDLSKFDTAPSLEILKSLGRPGWRSIEESIKDLVGS 339 (342)
T ss_dssp TCCSCEEEECCEEECHHHHHHHHHHHCTTSCCCCCCCCCCCCCCEECCHHHHHHHHHTTCCSCCCHHHHHHHHHCC
T ss_pred cccceEEEEcCCceEHHHHHHHHHHHcCCCcCCccCCccCcccccccchHHHHHHHHcCCCCCcCHHHHHHHHHHh
Confidence 777744 5558899999999999999988777665544222111 11222334456799998 9999999999764
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.96 E-value=2.6e-28 Score=199.52 Aligned_cols=221 Identities=19% Similarity=0.192 Sum_probs=161.2
Q ss_pred chhHhHHHHHHHHHHHhcCC-CEEEEccchhhhccCCCCC---CCccccCCCCCC-hhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKV-RRVVFTSSIGAVYMDPNRS---PDDVVDESCWSD-LEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v-~~~i~~Ss~~~vy~~~~~~---~~~~~~E~~~~~-~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.||.+++++|++.++ +++++.|| ..+|+..... ......++...+ ...+..|.++|+.+|+++|.+++.
T Consensus 117 ~~~Nv~gt~nll~~~~~~~~~~~~i~~ss-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~ 195 (393)
T d1i24a_ 117 QHNNVIGTLNVLFAIKEFGEECHLVKLGT-MGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAF 195 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCEEEEECC-GGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHH
T ss_pred cccccccccHHHHHHHHhccccceeeccc-cccccccccccccccccccccccccccccccccccHHHHHhhhhcccccc
Confidence 46899999999999999984 56788888 5888765431 001112211111 112246788999999999999999
Q ss_pred HHHHcCccEEEEecCcccCCCCCCC----------------CChhHHHHHHHHcCCCCc-cCC--CCCCceehHHHHHHH
Q 026418 77 EAVARGVDLVVVNPVLVLGPLLQST----------------VNASIIHILKYLNGSAKT-YAN--SVQAYVHVRDVALAH 137 (239)
Q Consensus 77 ~~~~~~~~~~i~Rp~~v~G~~~~~~----------------~~~~~~~~~~~~~~~~~~-~~~--~~~~~i~v~D~a~~~ 137 (239)
+.++.+++++++||+++|||..... ......++.+...++++. +|+ ..+||+||+|+++++
T Consensus 196 ~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~ 275 (393)
T d1i24a_ 196 TCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCV 275 (393)
T ss_dssp HHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHH
T ss_pred cccccceeeeecccccccCCCccccccccccccccccccccccchhhhhHHhhcCCeeEEeeecccccccccccchHHHH
Confidence 9999999999999999999875431 112345567777887765 454 568999999999999
Q ss_pred HHhhcCCCCCceE---EEecCCCCHHHHHHHHHHhCC--CCCCCCCC--CCCCCCCCCCcccChHHHHhhCCce-eCHHH
Q 026418 138 ILVYETPSASGRY---LCAESVLHRGEVVEILAKFFP--EYPIPTKC--SDEKNPRKKPYKFSNQKLKDLGLEF-TPVKQ 209 (239)
Q Consensus 138 ~~~~~~~~~~~~y---~~~~~~~s~~el~~~i~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~k~~~lg~~p-~~~~e 209 (239)
..++++....+.| +.+++.+|+.|+++.+.+..+ +..++... .+........+..|++|+++|||+| +++++
T Consensus 276 ~~~~~~~~~~g~~~~~~~~~~~~si~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~LGw~P~~~~~~ 355 (393)
T d1i24a_ 276 EIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGSKLGLDVKKMTVPNPRVEAEEHYYNAKHTKLMELGLEPHYLSDS 355 (393)
T ss_dssp HHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHHHTTTCCCCEEEECCSSCSCSSCCCCBCCCHHHHTTCCCCCCCHH
T ss_pred HHHHHhhcccceeeeecCCCCeeEHHHHHHHHHHHHHhhCCCcceeeccCCCCCCCccEecCCHHHHHHcCCccccCHHH
Confidence 9999987776633 344678999999999988752 22222211 1222334556778899998899999 99999
Q ss_pred HHHHHHHHHHHcCC
Q 026418 210 CLYETVKSLQEKGH 223 (239)
Q Consensus 210 ~i~~~~~~~~~~g~ 223 (239)
+|+++++|+++...
T Consensus 356 ~i~~~~~~~~~~k~ 369 (393)
T d1i24a_ 356 LLDSLLNFAVQFKD 369 (393)
T ss_dssp HHHHHHHHHHHTGG
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999987754
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.96 E-value=6.1e-28 Score=193.47 Aligned_cols=208 Identities=11% Similarity=0.011 Sum_probs=156.6
Q ss_pred chhHhHHHHHHHHHHHhcC-----CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK-----VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~-----v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
++.|+.++.++++++++.+ ..++++.|| +.+|+.... +.+|+++ ..|.+.|+.+|..+|.++..
T Consensus 103 ~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss-~~~~~~~~~----~~~E~~~------~~p~~~Y~~sK~~~E~~~~~ 171 (339)
T d1n7ha_ 103 ADVVATGALRLLEAVRSHTIDSGRTVKYYQAGS-SEMFGSTPP----PQSETTP------FHPRSPYAASKCAAHWYTVN 171 (339)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEE-GGGGTTSCS----SBCTTSC------CCCCSHHHHHHHHHHHHHHH
T ss_pred ccccccccchhhhhhhhcccccccceeeeeccc-ceecccCCC----CCCCCCC------CCCcchhhHHHHHHHHHHHH
Confidence 4689999999999997643 457888888 577765543 6888887 36789999999999999999
Q ss_pred HHHHcCccEEEEecCcccCCCCCCCCChh--HHHHHHHHcCCC-Cc-cC--CCCCCceehHHHHHHHHHhhcCCCCCceE
Q 026418 77 EAVARGVDLVVVNPVLVLGPLLQSTVNAS--IIHILKYLNGSA-KT-YA--NSVQAYVHVRDVALAHILVYETPSASGRY 150 (239)
Q Consensus 77 ~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~--~~~~~~~~~~~~-~~-~~--~~~~~~i~v~D~a~~~~~~~~~~~~~~~y 150 (239)
+.+.++++++++||+++|||......... ...+.....+.. .. ++ ...+||+|++|+|+++.+++.++...+.+
T Consensus 172 ~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~a~~~~~~~~~~~~~~~~ 251 (339)
T d1n7ha_ 172 YREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQEKPDDYV 251 (339)
T ss_dssp HHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTSSSCCEEE
T ss_pred HHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccceeeehHHHHHHHHHhcCCCCccc
Confidence 99999999999999999999755433211 122233333433 22 33 45788999999999999999987665566
Q ss_pred EEecCCCCHHHHHHHHHHhCCCCCCC----CCCCCCCCCCCCCcccChHHHHh-hCCce-eCHHHHHHHHHHHHHHc
Q 026418 151 LCAESVLHRGEVVEILAKFFPEYPIP----TKCSDEKNPRKKPYKFSNQKLKD-LGLEF-TPVKQCLYETVKSLQEK 221 (239)
Q Consensus 151 ~~~~~~~s~~el~~~i~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~k~~~-lg~~p-~~~~e~i~~~~~~~~~~ 221 (239)
++.+...++.++++.+.+.+ +...+ ......+......+..|++|+++ |||+| ++++++|++|++|+++.
T Consensus 252 ~~~~~~~s~~~~~~~~~~~~-~~~~~~~~~~~~~~~r~~~~~~~~~d~~Kak~~LGw~P~~~le~gi~~ti~~~~~~ 327 (339)
T d1n7ha_ 252 VATEEGHTVEEFLDVSFGYL-GLNWKDYVEIDQRYFRPAEVDNLQGDASKAKEVLGWKPQVGFEKLVKMMVDEDLEL 327 (339)
T ss_dssp ECCSCEEEHHHHHHHHHHHT-TCCGGGTEEECGGGSCSSCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred cccccccccchhhhhhhhhh-hcccCceeeeccCCCCCCCCCeeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHHHH
Confidence 66788999999999999997 33211 11111223344567789999977 89999 99999999999999753
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.93 E-value=1.8e-25 Score=176.13 Aligned_cols=204 Identities=16% Similarity=0.100 Sum_probs=139.6
Q ss_pred hhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHcC
Q 026418 3 EPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVARG 82 (239)
Q Consensus 3 ~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~ 82 (239)
+.|+.++.++++++++.+++ +|+.||. .+|+..... ...|+.+ ..|.+.|+.+|..+|.+++.+.++.+
T Consensus 91 ~~~~~~~~~~l~~~~~~~i~-~v~~ss~-~~~~~~~~~---~~~~~~~------~~~~~~Y~~~K~~~e~~~~~~~~~~~ 159 (307)
T d1eq2a_ 91 DNNYQYSKELLHYCLEREIP-FLYASSA-ATYGGRTSD---FIESREY------EKPLNVYGYSKFLFDEYVRQILPEAN 159 (307)
T ss_dssp HHTHHHHHHHHHHHHHHTCC-EEEEEEG-GGGTTCCSC---BCSSGGG------CCCSSHHHHHHHHHHHHHHHHGGGCS
T ss_pred cccccccccccccccccccc-ccccccc-ccccccccc---ccccccc------cccccccccccchhhhhccccccccc
Confidence 56899999999999999985 6677773 555444332 3333322 35789999999999999999999999
Q ss_pred ccEEEEecCcccCCCCCCCC---ChhHHHHHHHHcCCCCcc--C--CCCCCceehHHHHHHHHHhhcCCCCCceEEEe-c
Q 026418 83 VDLVVVNPVLVLGPLLQSTV---NASIIHILKYLNGSAKTY--A--NSVQAYVHVRDVALAHILVYETPSASGRYLCA-E 154 (239)
Q Consensus 83 ~~~~i~Rp~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~--~--~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~ 154 (239)
++++++||+++|||...... .....++..+..++.+.. + ...++|+|++|+++++..++.+.. .+.|+++ +
T Consensus 160 ~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~~~~~-~~~~~~~~~ 238 (307)
T d1eq2a_ 160 SQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV-SGIFNLGTG 238 (307)
T ss_dssp SCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC-CEEEEESCS
T ss_pred cccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHHHHHHhhhcc-ccccccccc
Confidence 99999999999999754321 223344566666765542 3 346799999999999999998653 4588776 8
Q ss_pred CCCCHHHHHHHHHHhCCCCCCCCCCC--CCCCCCCCCcccChHHHHh-hCCce-eCHHHHHHHHHHHH
Q 026418 155 SVLHRGEVVEILAKFFPEYPIPTKCS--DEKNPRKKPYKFSNQKLKD-LGLEF-TPVKQCLYETVKSL 218 (239)
Q Consensus 155 ~~~s~~el~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~k~~~-lg~~p-~~~~e~i~~~~~~~ 218 (239)
...|++|+++++.+..+...+..... ............|++|+++ +||+| ++++|+|+++++|+
T Consensus 239 ~~~si~~i~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~~k~~~~~~~~p~~sl~egi~~~i~w~ 306 (307)
T d1eq2a_ 239 RAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWL 306 (307)
T ss_dssp CCBCHHHHHHHC---------------------CCCSCCBCCHHHHHTTCCCCCCCHHHHHHHHHHHT
T ss_pred cchhHHHHHHHHHHhcCCCCeeEeeCCccCCCCCceeeecCHHHHHHHHCCCCCCCHHHHHHHHHHhC
Confidence 99999999999988753333222111 1112223445669999987 79999 99999999999996
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.93 E-value=1.3e-25 Score=179.40 Aligned_cols=215 Identities=16% Similarity=0.103 Sum_probs=155.0
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCC----------CChhhcccCCchHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCW----------SDLEFCKNTKNWYCYGKAVAE 71 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~----------~~~~~~~~~~~~Y~~sK~~~E 71 (239)
+++|+.||.||+++|.+.+++++|+.||.+++|+..... +..+.+. .....+..|.+.|+.+|...|
T Consensus 96 ~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e 172 (338)
T d1orra_ 96 FEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQY---KYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAAD 172 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTS---CEEECSSCEEETTCTTCBCTTSCCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhccccccccccccccccccccccc---ccccccccccccccccCcccCCccccccccccccchhh
Confidence 468999999999999999977777777755666654432 1111110 011112357789999999999
Q ss_pred HHHHHHHHHcCccEEEEecCcccCCCCCCCCC--hhHHHHHHHHc-----CCCCc-cCC--CCCCceehHHHHHHHHHhh
Q 026418 72 KAAWEEAVARGVDLVVVNPVLVLGPLLQSTVN--ASIIHILKYLN-----GSAKT-YAN--SVQAYVHVRDVALAHILVY 141 (239)
Q Consensus 72 ~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~--~~~~~~~~~~~-----~~~~~-~~~--~~~~~i~v~D~a~~~~~~~ 141 (239)
.++..+.+..+...+++|++.+||+....... ....++..+++ +++.. +++ ..++|+|++|++++++.++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~~~~v~D~~~~~~~~l 252 (338)
T d1orra_ 173 QYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTAL 252 (338)
T ss_dssp HHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHH
T ss_pred hhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeEeeecccchhhHHHHHH
Confidence 99999999999999999999999876543221 22233333332 34433 444 5688999999999999999
Q ss_pred cCCC--CCceEEEe---cCCCCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcccChHHHHh-hCCce-eCHHHHHHHH
Q 026418 142 ETPS--ASGRYLCA---ESVLHRGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKD-LGLEF-TPVKQCLYET 214 (239)
Q Consensus 142 ~~~~--~~~~y~~~---~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p-~~~~e~i~~~ 214 (239)
.+.. .+.+|++. +..+++.|+++.+.+.. +...+....+.+......+..|++|+++ |||+| ++++|+|+++
T Consensus 253 ~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~d~~k~~~~Lg~~p~~sl~e~i~~t 331 (338)
T d1orra_ 253 ANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYC-NIDMRFTNLPVRESDQRVFVADIKKITNAIDWSPKVSAKDGVQKM 331 (338)
T ss_dssp HTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHH-TCCCCEEEECCCSSCCSEECBCCHHHHHHHCCCCCSCHHHHHHHH
T ss_pred hccccccCccccccccccccccHHHHHHHHHHHH-CCCceeEeCCCCCCCcCeeeECHHHHHHHHCCCcCCCHHHHHHHH
Confidence 7643 23478764 56789999999999985 5554444433334445667789999987 99999 9999999999
Q ss_pred HHHHHH
Q 026418 215 VKSLQE 220 (239)
Q Consensus 215 ~~~~~~ 220 (239)
++|++.
T Consensus 332 i~W~k~ 337 (338)
T d1orra_ 332 YDWTSS 337 (338)
T ss_dssp HHHHHH
T ss_pred HHHHHc
Confidence 999973
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.92 E-value=1.2e-24 Score=175.19 Aligned_cols=210 Identities=15% Similarity=0.080 Sum_probs=151.2
Q ss_pred chhHhHHHHHHHHHHHhcC-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH-
Q 026418 2 VEPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV- 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~- 79 (239)
+++|+.|+.+++++|++.+ ...+++.|| +.+|...... .+.+|+++ ..|.++|+.+|..+|..+..+..
T Consensus 103 ~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~-~~~~~~~~~~--~~~~~~~~------~~p~~~y~~~k~~~e~~~~~~~~~ 173 (356)
T d1rkxa_ 103 YSTNVMGTVYLLEAIRHVGGVKAVVNITS-DKCYDNKEWI--WGYRENEA------MGGYDPYSNSKGCAELVTSSYRNS 173 (356)
T ss_dssp HHHHTHHHHHHHHHHHHHCCCCEEEEECC-GGGBCCCCSS--SCBCTTSC------BCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccchhhhhhhhccccccccccccc-cccccccccc--cccccccc------cCCCCccccccccchhhhhHHhhh
Confidence 4689999999999999987 556666666 4555444322 24555554 45789999999999999987765
Q ss_pred --------HcCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCcc--CCCCCCceehHHHHHHHHHhhcCCCCCc-
Q 026418 80 --------ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY--ANSVQAYVHVRDVALAHILVYETPSASG- 148 (239)
Q Consensus 80 --------~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~- 148 (239)
+.++.++++||+++|||++.........++..+..+.+..+ +.+.++++|++|++.++..++.+....+
T Consensus 174 ~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~a~~~~~~~~~~~~~ 253 (356)
T d1rkxa_ 174 FFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGYLLLAQKLYTDGA 253 (356)
T ss_dssp HSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHHHHHHHHHHHHHHTCG
T ss_pred cccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCceEEeeccccccccccccccchhhhhhhhhccccc
Confidence 34678999999999999865444444455666666666554 4567889999999999998887543221
Q ss_pred ----eEEE--e-cCCCCHHHHHHHHHHhCCCCCCCCCCC-CCCCCCCCCcccChHHHHh-hCCce-eCHHHHHHHHHHHH
Q 026418 149 ----RYLC--A-ESVLHRGEVVEILAKFFPEYPIPTKCS-DEKNPRKKPYKFSNQKLKD-LGLEF-TPVKQCLYETVKSL 218 (239)
Q Consensus 149 ----~y~~--~-~~~~s~~el~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~k~~~-lg~~p-~~~~e~i~~~~~~~ 218 (239)
..+. . +..+++.++++.+.+.+ +........ .........+.+|++|+++ |||+| ++++++|+++++||
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~d~skak~~LGw~P~~~l~egi~~ti~wy 332 (356)
T d1rkxa_ 254 EYAEGWNFGPNDADATPVKNIVEQMVKYW-GEGASWQLDGNAHPHEAHYLKLDCSKAKMQLGWHPRWNLNTTLEYIVGWH 332 (356)
T ss_dssp GGCSEEECCCCGGGCEEHHHHHHHHHHHH-CTTCCEEC-------CCCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHH
T ss_pred ccccccccccccccccccchhhhhhHHHh-CCCccEEEcCCCCCCCcCeeeEcHHHHHHHHCCCcCCCHHHHHHHHHHHH
Confidence 2222 2 57789999999999997 433332221 2223345667889999977 99999 99999999999999
Q ss_pred HHc
Q 026418 219 QEK 221 (239)
Q Consensus 219 ~~~ 221 (239)
+..
T Consensus 333 k~~ 335 (356)
T d1rkxa_ 333 KNW 335 (356)
T ss_dssp HHH
T ss_pred HHH
Confidence 863
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.91 E-value=3.3e-23 Score=161.31 Aligned_cols=197 Identities=17% Similarity=0.089 Sum_probs=152.5
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+..|+..+.++++++...+ .+++++|| ..+|+..... +.+|.++ ..|...|+.+|..+|.+++++
T Consensus 76 ~~~n~~~~~~~~~~~~~~~-~~~~~~ss-~~v~~~~~~~---~~~e~~~------~~~~~~~~~~k~~~e~~~~~~---- 140 (281)
T d1vl0a_ 76 YKINAIGPKNLAAAAYSVG-AEIVQIST-DYVFDGEAKE---PITEFDE------VNPQSAYGKTKLEGENFVKAL---- 140 (281)
T ss_dssp HHHHTHHHHHHHHHHHHHT-CEEEEEEE-GGGSCSCCSS---CBCTTSC------CCCCSHHHHHHHHHHHHHHHH----
T ss_pred ccccccccccccccccccc-cccccccc-ceeeeccccc---ccccccc------ccchhhhhhhhhHHHHHHHHh----
Confidence 3568889999999998877 57888888 5888776655 6788776 356789999999999988554
Q ss_pred CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCc-cCCCCCCceehHHHHHHHHHhhcCCCCCceEEEe-cCCCCH
Q 026418 82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKT-YANSVQAYVHVRDVALAHILVYETPSASGRYLCA-ESVLHR 159 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~ 159 (239)
+.+++++||+++||++. .....++..+..+.... +++..++++|++|+++++..++++... |+||++ ++.+|+
T Consensus 141 ~~~~~i~R~~~vyG~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~~~-g~~~~~~~~~~s~ 215 (281)
T d1vl0a_ 141 NPKYYIVRTAWLYGDGN----NFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEKNY-GTFHCTCKGICSW 215 (281)
T ss_dssp CSSEEEEEECSEESSSS----CHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHTCC-EEEECCCBSCEEH
T ss_pred CCCccccceeEEeCCCc----ccccchhhhhccCCceeecCCceeccchhhhhhhhhhhhhhhccc-CceeEeCCCccch
Confidence 78999999999999964 23445566666666544 578889999999999999999987654 688766 889999
Q ss_pred HHHHHHHHHhCCCCCCCCC-----CCCCCCCCCCCcccChHHHHh-hCCceeCHHHHHHHHHHHHH
Q 026418 160 GEVVEILAKFFPEYPIPTK-----CSDEKNPRKKPYKFSNQKLKD-LGLEFTPVKQCLYETVKSLQ 219 (239)
Q Consensus 160 ~el~~~i~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~k~~~-lg~~p~~~~e~i~~~~~~~~ 219 (239)
.|+++.+++.+ +.+.+.. ..+.....+....+|++|+++ +||+|.+++++|++++++++
T Consensus 216 ~e~~~~i~~~~-g~~~~i~~i~~~~~~~~a~rp~~~~ld~~k~~~~~g~~~~~~~~~l~~~l~~l~ 280 (281)
T d1vl0a_ 216 YDFAVEIFRLT-GIDVKVTPCTTEEFPRPAKRPKYSVLRNYMLELTTGDITREWKESLKEYIDLLQ 280 (281)
T ss_dssp HHHHHHHHHHH-CCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHTTCCCCCBHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHh-CCCceEEeccHHHcCCcCCCccccccCHHHHHHHhCCCCCCHHHHHHHHHHHhc
Confidence 99999999997 4433221 111111223445689999977 89999999999999999985
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.84 E-value=6e-20 Score=143.60 Aligned_cols=202 Identities=12% Similarity=0.046 Sum_probs=142.1
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
++.|+.++.+|+++|++.++ +++++|| +.+|+..... +.+|+++. .|.+.|+.+|..+|..+..+
T Consensus 78 ~~~n~~~~~~l~~~~~~~~~-~~~~~ss-~~~~~~~~~~---~~~E~~~~------~p~~~y~~~k~~~e~~~~~~---- 142 (298)
T d1n2sa_ 78 QLLNATSVEAIAKAANETGA-WVVHYST-DYVFPGTGDI---PWQETDAT------SPLNVYGKTKLAGEKALQDN---- 142 (298)
T ss_dssp HHHHTHHHHHHHHHHTTTTC-EEEEEEE-GGGSCCCTTC---CBCTTSCC------CCSSHHHHHHHHHHHHHHHH----
T ss_pred ccccccccccchhhhhcccc-ccccccc-cccccCCCCC---CCcccccc------CCCchHhhhhhhhhhhHHhh----
Confidence 46799999999999999885 7999999 5888766555 78888763 56899999999999988665
Q ss_pred CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCc-cCCCCCCceehHHHHHHHHHhhc----CCCCCceEEEe-cC
Q 026418 82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKT-YANSVQAYVHVRDVALAHILVYE----TPSASGRYLCA-ES 155 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~D~a~~~~~~~~----~~~~~~~y~~~-~~ 155 (239)
.....++|++..++.. .......+...+..+..+. .+....+++|++|+++++..++. .....++||++ ++
T Consensus 143 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~~~~~~~~~~~~~n~~~~~ 219 (298)
T d1n2sa_ 143 CPKHLIFRTSWVYAGK---GNNFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAGG 219 (298)
T ss_dssp CSSEEEEEECSEECSS---SCCHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCBS
T ss_pred hcccccccccceeecc---CCccchhhhhhhcccceeecccceeecccccchHHHHHHHHHhhhhccccccccccccCCC
Confidence 3455666666665443 2222223334444444443 45667789999999999987764 33445699887 68
Q ss_pred CCCHHHHHHHHHHhCC--CCCCCCC--------CCCCCCCCCCCcccChHHHHh-hCCceeCHHHHHHHHHHHHHHc
Q 026418 156 VLHRGEVVEILAKFFP--EYPIPTK--------CSDEKNPRKKPYKFSNQKLKD-LGLEFTPVKQCLYETVKSLQEK 221 (239)
Q Consensus 156 ~~s~~el~~~i~~~~~--~~~~~~~--------~~~~~~~~~~~~~~~~~k~~~-lg~~p~~~~e~i~~~~~~~~~~ 221 (239)
.++..++++.+.+... +...+.. ..+.....+....+|++|+++ +||+|.+++++|+++++++...
T Consensus 220 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~a~RP~~~~ld~~K~~~~~~~~~~~~~~gl~~~i~~~~~~ 296 (298)
T d1n2sa_ 220 TTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFDLILPQWELGVKRMLTEMFTT 296 (298)
T ss_dssp CEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHHHTCCCCBHHHHHHHHHHHHHSC
T ss_pred ceecHHHHHHHHhhhhccCccccccceeeeehhhcCccCCCccccccCHHHHHHHHCCCCCcHHHHHHHHHHHHHhh
Confidence 8999999998887641 1111111 001111123345789999977 8999999999999999998754
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.54 E-value=9.1e-16 Score=120.16 Aligned_cols=145 Identities=16% Similarity=0.134 Sum_probs=99.2
Q ss_pred hhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHcC
Q 026418 3 EPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVARG 82 (239)
Q Consensus 3 ~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~ 82 (239)
..|..++.+++++|.+.+..++++.||. +++.... ..+ ..+...|...|..+++. ....+
T Consensus 89 ~~~~~~~~~~l~~a~~~~~~~~v~~Ss~-g~~~~~~---------~~~------~~~~~~~~~~~~~~~~~----~~~~~ 148 (312)
T d1qyda_ 89 SHHILEQLKLVEAIKEAGNIKRFLPSEF-GMDPDIM---------EHA------LQPGSITFIDKRKVRRA----IEAAS 148 (312)
T ss_dssp STTTTTHHHHHHHHHHSCCCSEEECSCC-SSCTTSC---------CCC------CSSTTHHHHHHHHHHHH----HHHTT
T ss_pred ccchhhhhHHHHHHHHhcCCcEEEEeec-cccCCCc---------ccc------cchhhhhhHHHHHHHHh----hcccc
Confidence 5688899999999999987788888884 5443221 111 13355566666666554 45669
Q ss_pred ccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCC-Ccc--CCCCCCceehHHHHHHHHHhhcCCCCCc--eEEEe-cCC
Q 026418 83 VDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSA-KTY--ANSVQAYVHVRDVALAHILVYETPSASG--RYLCA-ESV 156 (239)
Q Consensus 83 ~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~--~y~~~-~~~ 156 (239)
++++++||+.+||+........ .......+.. +.+ ++..++|+|++|+|++++.++.++...+ +|+++ ++.
T Consensus 149 ~~~~i~r~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ 225 (312)
T d1qyda_ 149 IPYTYVSSNMFAGYFAGSLAQL---DGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNI 225 (312)
T ss_dssp CCBCEEECCEEHHHHTTTSSCT---TCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGE
T ss_pred cceEEeccceeecCCccchhhH---HHHhhhcccccccccccccccceeeHHHHHHHHHHHhcCccccCceEEEeCCCcC
Confidence 9999999999999653321111 0011112222 223 4567889999999999999998876544 45666 578
Q ss_pred CCHHHHHHHHHHhC
Q 026418 157 LHRGEVVEILAKFF 170 (239)
Q Consensus 157 ~s~~el~~~i~~~~ 170 (239)
+|++|+++.+.+.+
T Consensus 226 ~s~~e~~~~~~~~~ 239 (312)
T d1qyda_ 226 LSQKEVIQIWERLS 239 (312)
T ss_dssp EEHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 99999999999986
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.54 E-value=5.8e-14 Score=105.56 Aligned_cols=122 Identities=16% Similarity=0.020 Sum_probs=89.6
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
.++|+.++.+++++|.+.++++|||+||. .+++ .+.+.|+.+|..+|+.+.+ .
T Consensus 101 ~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~-~~~~----------------------~~~~~Y~~~K~~~E~~l~~----~ 153 (232)
T d2bkaa1 101 VRVDRDYVLKSAELAKAGGCKHFNLLSSK-GADK----------------------SSNFLYLQVKGEVEAKVEE----L 153 (232)
T ss_dssp HHHHTHHHHHHHHHHHHTTCCEEEEECCT-TCCT----------------------TCSSHHHHHHHHHHHHHHT----T
T ss_pred hhhcccccceeeecccccCccccccCCcc-cccc----------------------CccchhHHHHHHhhhcccc----c
Confidence 46899999999999999999999999995 5542 2356799999999998755 3
Q ss_pred Cc-cEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCceEEEec
Q 026418 82 GV-DLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCAE 154 (239)
Q Consensus 82 ~~-~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~~ 154 (239)
++ +++|+||+.+||++... ......+..++...+.. ......||++|+|++++.++..+...+++++++
T Consensus 154 ~~~~~~IlRP~~i~G~~~~~--~~~~~~~~~~~~~~~~~--~~~~~~I~~~dvA~a~i~~~~~~~~~~~~i~~~ 223 (232)
T d2bkaa1 154 KFDRYSVFRPGVLLCDRQES--RPGEWLVRKFFGSLPDS--WASGHSVPVVTVVRAMLNNVVRPRDKQMELLEN 223 (232)
T ss_dssp CCSEEEEEECCEEECTTGGG--SHHHHHHHHHHCSCCTT--GGGGTEEEHHHHHHHHHHHHTSCCCSSEEEEEH
T ss_pred cccceEEecCceeecCCCcC--cHHHHHHHHHhhccCCc--ccCCCeEEHHHHHHHHHHHHhcCccCCeEEEcH
Confidence 66 48999999999986542 22222334444433221 123447999999999999888777666777663
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.47 E-value=4.6e-14 Score=104.65 Aligned_cols=114 Identities=18% Similarity=0.111 Sum_probs=81.4
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
.+.|+.++.+++++|++.++++|||+||. .+++ .+.+.|+.+|..+|+.++ +.
T Consensus 84 ~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~-~~~~----------------------~~~~~y~~~K~~~E~~l~----~~ 136 (212)
T d2a35a1 84 RAVDFDLPLAVGKRALEMGARHYLVVSAL-GADA----------------------KSSIFYNRVKGELEQALQ----EQ 136 (212)
T ss_dssp HHHHTHHHHHHHHHHHHTTCCEEEEECCT-TCCT----------------------TCSSHHHHHHHHHHHHHT----TS
T ss_pred ccchhhhhhhccccccccccccccccccc-cccc----------------------ccccchhHHHHHHhhhcc----cc
Confidence 46899999999999999999999999995 6552 235679999999998875 34
Q ss_pred Cc-cEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCceE
Q 026418 82 GV-DLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRY 150 (239)
Q Consensus 82 ~~-~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y 150 (239)
++ +++++||+.+||+.+..... .........+..+.+..||++|+|++++.++.++.. |.+
T Consensus 137 ~~~~~~I~Rp~~v~G~~~~~~~~-------~~~~~~~~~~~~~~~~~i~v~DvA~ai~~~~~~~~~-g~~ 198 (212)
T d2a35a1 137 GWPQLTIARPSLLFGPREEFRLA-------EILAAPIARILPGKYHGIEACDLARALWRLALEEGK-GVR 198 (212)
T ss_dssp CCSEEEEEECCSEESTTSCEEGG-------GGTTCCCC----CHHHHHHHHHHHHHHHHHHTCCCS-EEE
T ss_pred ccccceeeCCcceeCCcccccHH-------HHHHHHHhhccCCCCcEEEHHHHHHHHHHHHcCCCC-CCE
Confidence 66 59999999999987542111 011111111122334579999999999999986654 443
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.46 E-value=6.5e-15 Score=114.62 Aligned_cols=146 Identities=19% Similarity=0.158 Sum_probs=100.1
Q ss_pred hhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHcC
Q 026418 3 EPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVARG 82 (239)
Q Consensus 3 ~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~ 82 (239)
..+..++.++++++..++++++++.||. ..+.. +... ..+...+...+...+..+ ...+
T Consensus 86 ~~~~~~~~~~~~a~~~~~~~~~~~~s~~-~~~~~----------~~~~------~~~~~~~~~~~~~~~~~~----~~~~ 144 (307)
T d1qyca_ 86 SLQIESQVNIIKAIKEVGTVKRFFPSEF-GNDVD----------NVHA------VEPAKSVFEVKAKVRRAI----EAEG 144 (307)
T ss_dssp GGGSGGGHHHHHHHHHHCCCSEEECSCC-SSCTT----------SCCC------CTTHHHHHHHHHHHHHHH----HHHT
T ss_pred ccccchhhHHHHHHHHhccccceeeecc-ccccc----------cccc------cccccccccccccccchh----hccC
Confidence 3567788999999999998889998884 33211 1111 012334555555555554 4558
Q ss_pred ccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCc-c--CCCCCCceehHHHHHHHHHhhcCCCCCc--eEEEe-cCC
Q 026418 83 VDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKT-Y--ANSVQAYVHVRDVALAHILVYETPSASG--RYLCA-ESV 156 (239)
Q Consensus 83 ~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~--~y~~~-~~~ 156 (239)
++++++||+++||+...... ..+....++.... + ++..++|+|++|+|++++.++.++...+ +|+++ ++.
T Consensus 145 ~~~~i~r~~~v~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~~~~~~~ 220 (307)
T d1qyca_ 145 IPYTYVSSNCFAGYFLRSLA----QAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANT 220 (307)
T ss_dssp CCBEEEECCEEHHHHTTTTT----CTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGE
T ss_pred CCceecccceecCCCccchh----hhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcChhhcCceeEEeCCCCc
Confidence 99999999999997543211 1122233333322 2 5667889999999999999998875544 56665 789
Q ss_pred CCHHHHHHHHHHhCCCCC
Q 026418 157 LHRGEVVEILAKFFPEYP 174 (239)
Q Consensus 157 ~s~~el~~~i~~~~~~~~ 174 (239)
+|+.|+++.+.+.+ |.+
T Consensus 221 ~s~~ei~~~~~~~~-G~~ 237 (307)
T d1qyca_ 221 LSLNELVALWEKKI-DKT 237 (307)
T ss_dssp EEHHHHHHHHHHHT-TSC
T ss_pred cCHHHHHHHHHHHH-CCC
Confidence 99999999999997 443
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.42 E-value=1.6e-12 Score=95.60 Aligned_cols=117 Identities=15% Similarity=0.129 Sum_probs=86.1
Q ss_pred hhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHcC
Q 026418 3 EPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVARG 82 (239)
Q Consensus 3 ~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~ 82 (239)
+++..+++++++++++++++|||++||. .+|.+.... ......|...|..+|++++ +.+
T Consensus 85 ~~~~~~~~~l~~aa~~~~v~r~i~~ss~-~~~~~~~~~----------------~~~~~~~~~~~~~~e~~l~----~~~ 143 (205)
T d1hdoa_ 85 TVMSEGARNIVAAMKAHGVDKVVACTSA-FLLWDPTKV----------------PPRLQAVTDDHIRMHKVLR----ESG 143 (205)
T ss_dssp CHHHHHHHHHHHHHHHHTCCEEEEECCG-GGTSCTTCS----------------CGGGHHHHHHHHHHHHHHH----HTC
T ss_pred hhhHHHHHHHHHHHHhcCCCeEEEEeee-eccCCCccc----------------cccccccchHHHHHHHHHH----hcC
Confidence 4688999999999999999999999994 777544322 0124568899999998774 469
Q ss_pred ccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCc-eEEEe
Q 026418 83 VDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASG-RYLCA 153 (239)
Q Consensus 83 ~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~y~~~ 153 (239)
++++++||+.+++........ ....+.....+++++|+|++++.+++++...| .+.++
T Consensus 144 ~~~tiirp~~~~~~~~~~~~~-------------~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~s 202 (205)
T d1hdoa_ 144 LKYVAVMPPHIGDQPLTGAYT-------------VTLDGRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYPS 202 (205)
T ss_dssp SEEEEECCSEEECCCCCSCCE-------------EESSSCSSCSEEEHHHHHHHHHHTTSCSTTTTCEEEEE
T ss_pred CceEEEecceecCCCCcccEE-------------EeeCCCCCCCcCCHHHHHHHHHHHhCCCCCCCEEEecC
Confidence 999999999998753321100 01124456779999999999999998877555 55444
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.28 E-value=4.4e-12 Score=95.17 Aligned_cols=138 Identities=18% Similarity=0.106 Sum_probs=94.2
Q ss_pred hhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHcC
Q 026418 3 EPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVARG 82 (239)
Q Consensus 3 ~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~ 82 (239)
.+|+.++++++..+...+.+++.+.|+. ..+.... +.. ......|...+...+. +....+
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~-~~~~~~~-----~~~----------~~~~~~~~~~~~~~~~----~~~~~~ 165 (252)
T d2q46a1 106 QVDWIGQKNQIDAAKVAGVKHIVVVGSM-GGTNPDH-----PLN----------KLGNGNILVWKRKAEQ----YLADSG 165 (252)
T ss_dssp HHTTHHHHHHHHHHHHHTCSEEEEEEET-TTTCTTC-----GGG----------GGGGCCHHHHHHHHHH----HHHHSS
T ss_pred ccccccceeecccccccccccccccccc-ccCCCCc-----ccc----------cccccchhhhhhhhhh----hhhccc
Confidence 5789999999999999998999999884 4442211 000 1123445555554444 445679
Q ss_pred ccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCc-eEEEec----CCC
Q 026418 83 VDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASG-RYLCAE----SVL 157 (239)
Q Consensus 83 ~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~y~~~~----~~~ 157 (239)
++++++||+.+||+..... ....+...........++|++|+|++++.++.++...| +|++++ ...
T Consensus 166 ~~~~ilRp~~v~g~~~~~~---------~~~~~~~~~~~~~~~~~i~~~Dva~a~~~~l~~~~~~g~~~~i~~~~~~~~~ 236 (252)
T d2q46a1 166 TPYTIIRAGGLLDKEGGVR---------ELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTST 236 (252)
T ss_dssp SCEEEEEECEEECSCTTSS---------CEEEESTTGGGGSSCCEEEHHHHHHHHHHHTTCGGGTTEEEEEEECCTTTSC
T ss_pred ccceeecceEEECCCcchh---------hhhhccCcccccCCCCeEEHHHHHHHHHHHhCCccccCcEEEEeeCCCCCCh
Confidence 9999999999999864321 11122222233455779999999999999998877666 897763 346
Q ss_pred CHHHHHHHHHHh
Q 026418 158 HRGEVVEILAKF 169 (239)
Q Consensus 158 s~~el~~~i~~~ 169 (239)
++.++.+++.+.
T Consensus 237 ~~~~~~~lf~~i 248 (252)
T d2q46a1 237 PTKDFKALFSQV 248 (252)
T ss_dssp CCCCHHHHHTTC
T ss_pred hHHHHHHHHHHH
Confidence 788888777665
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.09 E-value=8.2e-11 Score=93.31 Aligned_cols=143 Identities=13% Similarity=0.009 Sum_probs=96.9
Q ss_pred hhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHcC
Q 026418 3 EPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVARG 82 (239)
Q Consensus 3 ~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~ 82 (239)
..|+..+++++++|.++|++++++.||+ ....... ..+..+|..+|...|..+ ...+
T Consensus 84 ~~~~~~~~~~~~aa~~agv~~~v~~Ss~-~~~~~~~------------------~~~~~~~~~~k~~~~~~~----~~~~ 140 (350)
T d1xgka_ 84 GDEIAIGKDLADAAKRAGTIQHYIYSSM-PDHSLYG------------------PWPAVPMWAPKFTVENYV----RQLG 140 (350)
T ss_dssp SCHHHHHHHHHHHHHHHSCCSEEEEEEC-CCGGGTS------------------SCCCCTTTHHHHHHHHHH----HTSS
T ss_pred chhhhhhhHHHHHHHHhCCCceEEEeec-cccccCC------------------cccchhhhhhHHHHHHHH----Hhhc
Confidence 4578899999999999998888888885 3222111 123456778888887765 4458
Q ss_pred ccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCC----CccCCCCCCceeh-HHHHHHHHHhhcCCC--CCc-eEEEec
Q 026418 83 VDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSA----KTYANSVQAYVHV-RDVALAHILVYETPS--ASG-RYLCAE 154 (239)
Q Consensus 83 ~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~v-~D~a~~~~~~~~~~~--~~~-~y~~~~ 154 (239)
++++++|++.+++.......... .......+.. +..++....++++ +|+++++..++.... ..| +|++++
T Consensus 141 ~~~~~vr~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~~~~~G~~~~~~g 218 (350)
T d1xgka_ 141 LPSTFVYAGIYNNNFTSLPYPLF--QMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTF 218 (350)
T ss_dssp SCEEEEEECEEGGGCBSSSCSSC--BEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECS
T ss_pred cCceeeeeceeeccccccccccc--cccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCChhhcCCeEEEEeC
Confidence 99999999998875432211110 0011112221 1124556677776 799999999886542 234 888888
Q ss_pred CCCCHHHHHHHHHHhC
Q 026418 155 SVLHRGEVVEILAKFF 170 (239)
Q Consensus 155 ~~~s~~el~~~i~~~~ 170 (239)
+.+|+.|+++++.+.+
T Consensus 219 ~~~T~~eia~~l~~~~ 234 (350)
T d1xgka_ 219 ETLSPVQVCAAFSRAL 234 (350)
T ss_dssp EEECHHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHH
Confidence 8899999999999986
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=98.07 E-value=1e-05 Score=60.60 Aligned_cols=112 Identities=14% Similarity=0.111 Sum_probs=78.2
Q ss_pred chhHhHHHHHHHHHHHhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHHHc
Q 026418 2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR 81 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 81 (239)
+++|+.++.++.++++..+..++|++||.++.++... ...|+.+|...+.+.+++. ..
T Consensus 117 ~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~~~---------------------~~~YaAaka~l~~la~~~~-~~ 174 (259)
T d2fr1a1 117 SRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPG---------------------LGGYAPGNAYLDGLAQQRR-SD 174 (259)
T ss_dssp THHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTT---------------------CTTTHHHHHHHHHHHHHHH-HT
T ss_pred hhhhccchhHHHHHhhccCCceEeeecchhhccCCcc---------------------cHHHHHHHHhHHHHHHHHH-hC
Confidence 5789999999999998888889999999866664322 4569999999999988775 56
Q ss_pred CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCc
Q 026418 82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASG 148 (239)
Q Consensus 82 ~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~ 148 (239)
|++++.+.||.+.+++.... .+...++. .....+..+++++++..++.......
T Consensus 175 Gi~v~~I~pg~~~~~g~~~~------~~~~~~~~-------~G~~~~~~~~~~~~l~~~l~~~~~~~ 228 (259)
T d2fr1a1 175 GLPATAVAWGTWAGSGMAEG------PVADRFRR-------HGVIEMPPETACRALQNALDRAEVCP 228 (259)
T ss_dssp TCCCEEEEECCBC------------------CTT-------TTEECBCHHHHHHHHHHHHHTTCSSC
T ss_pred CCCEEECCCCcccCCccccc------hHHHHHHh-------cCCCCCCHHHHHHHHHHHHhCCCceE
Confidence 99999999999876643211 11111111 11234678999999999998765433
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.84 E-value=1.3e-05 Score=60.97 Aligned_cols=131 Identities=21% Similarity=0.240 Sum_probs=77.9
Q ss_pred chhHhHHHHHHHHHH----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.|+.++.+++ ++.+-.++|++||+++..+.+ ....|+.+|...+.+.+.+
T Consensus 111 ~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~---------------------~~~~Y~asKaal~~l~~~l 169 (285)
T d1jtva_ 111 LDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLP---------------------FNDVYCASKFALEGLCESL 169 (285)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCT---------------------TCHHHHHHHHHHHHHHHHH
T ss_pred hhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCC---------------------CchHHHHHHHHHHHHHHHH
Confidence 678999988888876 445557899999975543221 2467999999999998888
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHH--------HHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIH--------ILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSA 146 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~ 146 (239)
+.+ .|+++..+.||.+--+............ ..+..+................+|+|++++.++..+.+
T Consensus 170 a~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PeeVA~~v~~~~~~~~p 249 (285)
T d1jtva_ 170 AVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEVFLTALRAPKP 249 (285)
T ss_dssp HHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHHHHHHHHHHCSSC
T ss_pred HHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHHhCCCC
Confidence 765 4899999999998543221111000000 00000000000000001144578999999999987655
Q ss_pred CceEEEe
Q 026418 147 SGRYLCA 153 (239)
Q Consensus 147 ~~~y~~~ 153 (239)
.-.|..+
T Consensus 250 ~~ry~~g 256 (285)
T d1jtva_ 250 TLRYFTT 256 (285)
T ss_dssp CSEEESC
T ss_pred CeEEecH
Confidence 4455544
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=97.82 E-value=0.00022 Score=52.86 Aligned_cols=123 Identities=11% Similarity=0.056 Sum_probs=80.3
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..+.+++. +.+-.++|++||.++..+.+ ....|+.+|...+.+.+.+
T Consensus 115 ~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~---------------------~~~~Y~asKaal~~ltr~l 173 (251)
T d2c07a1 115 LRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNV---------------------GQANYSSSKAGVIGFTKSL 173 (251)
T ss_dssp HHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT---------------------TCHHHHHHHHHHHHHHHHH
T ss_pred heeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCC---------------------CCHHHHHHHHHHHHHHHHH
Confidence 6789999888887653 44457899999975543211 2467999999999999988
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eEE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYL 151 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y~ 151 (239)
+.+ .|+++-.+.||.+-.+..... .......+....+. .-+...+|+|.++.+++... -.-| +..
T Consensus 174 A~el~~~gIrVN~V~PG~v~T~~~~~~---~~~~~~~~~~~~pl------~R~~~pedvA~~v~fL~S~~s~~itG~~i~ 244 (251)
T d2c07a1 174 AKELASRNITVNAIAPGFISSDMTDKI---SEQIKKNIISNIPA------GRMGTPEEVANLACFLSSDKSGYINGRVFV 244 (251)
T ss_dssp HHHHGGGTEEEEEEEECSBCC-----C---CHHHHHHHHTTCTT------SSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHhhhhCeEEEEEccCCEeccccccc---CHHHHHHHHhcCCC------CCCcCHHHHHHHHHHHhCchhCCCcCcEEE
Confidence 765 478999999999976542211 12333334333321 23667899999999988533 2234 444
Q ss_pred Eec
Q 026418 152 CAE 154 (239)
Q Consensus 152 ~~~ 154 (239)
+.|
T Consensus 245 vDG 247 (251)
T d2c07a1 245 IDG 247 (251)
T ss_dssp EST
T ss_pred ECC
Confidence 443
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=97.79 E-value=0.0001 Score=54.39 Aligned_cols=123 Identities=15% Similarity=0.084 Sum_probs=80.3
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..+.+++. +.+-.++|++||.++..+.+ ....|+.+|...+.+.+.+
T Consensus 106 ~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~---------------------~~~~Y~asKaal~~lt~~l 164 (243)
T d1q7ba_ 106 IETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNG---------------------GQANYAAAKAGLIGFSKSL 164 (243)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT---------------------TCHHHHHHHHHHHHHHHHH
T ss_pred cceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCC---------------------CCHHHHHHHHHHHHHHHHH
Confidence 6789999998888874 33456899999974443221 2467999999999999888
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eEE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYL 151 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y~ 151 (239)
+.+ .|+++-.+.||.+--+..... .......+.+..+ ..-+...+|+|.++.+++... ..-| +..
T Consensus 165 A~ela~~gIrVN~I~PG~i~T~~~~~~---~~~~~~~~~~~~p------l~R~~~pedvA~~v~fL~S~~s~~itGq~i~ 235 (243)
T d1q7ba_ 165 AREVASRGITVNVVAPGFIETDMTRAL---SDDQRAGILAQVP------AGRLGGAQEIANAVAFLASDEAAYITGETLH 235 (243)
T ss_dssp HHHHGGGTEEEEEEEECSBCCHHHHTS---CHHHHHHHHTTCT------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHhCccCeEEEEEecceEechhhhhh---hhhHHHHHHhcCC------CCCCCCHHHHHHHHHHHhCchhcCCcCCeEE
Confidence 765 489999999998854321110 1122223332222 123567899999999988532 2234 555
Q ss_pred Eec
Q 026418 152 CAE 154 (239)
Q Consensus 152 ~~~ 154 (239)
+.|
T Consensus 236 vdG 238 (243)
T d1q7ba_ 236 VNG 238 (243)
T ss_dssp EST
T ss_pred ECC
Confidence 543
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.77 E-value=0.00016 Score=53.46 Aligned_cols=114 Identities=19% Similarity=0.112 Sum_probs=74.1
Q ss_pred chhHhHHHHHHHHHHHhc----------CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----------KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAE 71 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----------~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E 71 (239)
+++|+.++.++.+++.+. +-.++|++||.++..+. .....|+.+|...+
T Consensus 113 ~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~---------------------~~~~~Y~asKaal~ 171 (248)
T d2o23a1 113 LDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ---------------------VGQAAYSASKGGIV 171 (248)
T ss_dssp HHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC---------------------TTCHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCC---------------------CCchHHHHHHHHHH
Confidence 578999999999988553 22479999997443321 12467999999999
Q ss_pred HHHHHHHHHc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 72 KAAWEEAVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 72 ~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
.+.+.++.+. |+++-.+.||.+.-+.... ........+.+..++ ..-+...+|+|+++.+++..+
T Consensus 172 ~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~---~~~~~~~~~~~~~pl-----~~R~g~peevA~~v~fL~s~~ 239 (248)
T d2o23a1 172 GMTLPIARDLAPIGIRVMTIAPGLFGTPLLTS---LPEKVCNFLASQVPF-----PSRLGDPAEYAHLVQAIIENP 239 (248)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECCBCCC-------------CHHHHTCSS-----SCSCBCHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHhcccCcceeeeccCceecchhhc---CCHHHHHHHHhcCCC-----CCCCcCHHHHHHHHHHHHhCC
Confidence 9999988764 7899999999886443211 011111122222111 012567899999999988744
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=97.77 E-value=0.00033 Score=52.35 Aligned_cols=128 Identities=22% Similarity=0.222 Sum_probs=81.4
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..+.+++.+ .+-.++|++||.++..+.. .....|+.+|...+.+.+.+
T Consensus 112 ~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~--------------------~~~~~Y~asKaal~~lt~~l 171 (268)
T d2bgka1 112 MDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGE--------------------GVSHVYTATKHAVLGLTTSL 171 (268)
T ss_dssp HHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCT--------------------TSCHHHHHHHHHHHHHHHHH
T ss_pred HHHhhcchhhhhhhhcchHhhcCCCCcccccccccccccc--------------------ccccccchhHHHHHhCHHHH
Confidence 67899998888887743 3456899999964433211 11346999999999999888
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eEE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYL 151 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y~ 151 (239)
+.+ .|+++-.+.||.+-.+....................... ..-+...+|+|+++++++... -.-| ++.
T Consensus 172 A~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~----~gr~~~pedvA~~v~fL~S~~s~~itGq~i~ 247 (268)
T d2bgka1 172 CTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANL----KGTLLRAEDVADAVAYLAGDESKYVSGLNLV 247 (268)
T ss_dssp HHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSS----CSCCCCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhcccc----CCCCcCHHHHHHHHHHHhChhhCCccCceEE
Confidence 765 479999999999877654322222222222222211111 123567899999999988532 2334 555
Q ss_pred Ee
Q 026418 152 CA 153 (239)
Q Consensus 152 ~~ 153 (239)
+.
T Consensus 248 VD 249 (268)
T d2bgka1 248 ID 249 (268)
T ss_dssp ES
T ss_pred EC
Confidence 54
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.71 E-value=0.00012 Score=53.91 Aligned_cols=122 Identities=17% Similarity=0.080 Sum_probs=76.4
Q ss_pred chhHhHHHHHHHHHH----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..+.+++ ++.+-.++|++||.++..+. .....|+.+|...+.+.+.+
T Consensus 101 ~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~---------------------~~~~~Y~asKaal~~lt~~l 159 (237)
T d1uzma1 101 INANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGI---------------------GNQANYAASKAGVIGMARSI 159 (237)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC--------------------------CCHHHHHHHHHHHHHHHHH
T ss_pred HHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCC---------------------cccHHHHHHHHHHHHHHHHH
Confidence 678999987776654 45566799999997443321 12467999999999998888
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eEE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYL 151 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y~ 151 (239)
+.+ .|+++-.+.|+.+.-+.... ........+.+..+ ..-+...+|+|+++.+++... -.-| ++.
T Consensus 160 A~e~~~~gIrVN~I~PG~v~T~~~~~---~~~~~~~~~~~~~p------l~R~~~pedvA~~v~fL~S~~s~~itG~~i~ 230 (237)
T d1uzma1 160 ARELSKANVTANVVAPGYIDTDMTRA---LDERIQQGALQFIP------AKRVGTPAEVAGVVSFLASEDASYISGAVIP 230 (237)
T ss_dssp HHHHGGGTEEEEEEEECSBCCHHHHH---SCHHHHHHHGGGCT------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred HhhhhcCCceeeeeeeCcCCChhhhc---cCHHHHHHHHhcCC------CCCCcCHHHHHHHHHHHhCchhcCCcCCeEE
Confidence 765 47899999999985432100 00111122222211 123567899999999988532 2334 455
Q ss_pred Ee
Q 026418 152 CA 153 (239)
Q Consensus 152 ~~ 153 (239)
+.
T Consensus 231 vd 232 (237)
T d1uzma1 231 VD 232 (237)
T ss_dssp ES
T ss_pred EC
Confidence 44
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=97.69 E-value=0.00025 Score=52.20 Aligned_cols=105 Identities=18% Similarity=0.191 Sum_probs=72.8
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.|+..+.+++. +.+-.++|++||.++..+. .....|+.+|...+-+.+.+
T Consensus 113 ~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~---------------------~~~~~Y~asK~al~~lt~~l 171 (240)
T d2bd0a1 113 MNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAF---------------------RHSSIYCMSKFGQRGLVETM 171 (240)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred CCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCC---------------------CCChHHHHHHHHHHHHHHHH
Confidence 6789999888887774 3445689999997443321 12467999999999888887
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS 145 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 145 (239)
+.+ .|+++..+.||.+--+..... . ......+...+|+|+++++++..+.
T Consensus 172 a~el~~~gIrvn~i~PG~v~T~~~~~~---------------~---~~~~~~~~~PedvA~~v~~l~s~~~ 224 (240)
T d2bd0a1 172 RLYARKCNVRITDVQPGAVYTPMWGKV---------------D---DEMQALMMMPEDIAAPVVQAYLQPS 224 (240)
T ss_dssp HHHHTTTTEEEEEEEECCBCSTTTCCC---------------C---STTGGGSBCHHHHHHHHHHHHTSCT
T ss_pred HHHhCcCCeEEEEeeeCcccCchhhhc---------------C---HhhHhcCCCHHHHHHHHHHHHcCCc
Confidence 665 479999999998854421110 0 0011224567999999999887553
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=97.66 E-value=0.00035 Score=51.54 Aligned_cols=125 Identities=14% Similarity=0.040 Sum_probs=74.1
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..+.+++. +.+-.++|++||.++..+. .....|+.+|...+.+.+.+
T Consensus 108 ~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~---------------------~~~~~Y~asKaal~~ltk~l 166 (247)
T d2ew8a1 108 FEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKI---------------------EAYTHYISTKAANIGFTRAL 166 (247)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCC---------------------SSCHHHHHHHHHHHHHHHHH
T ss_pred heeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccC---------------------cccccchhhhccHHHHHHHH
Confidence 6789999988888764 3445789999996333211 12467999999999998888
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eEE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYL 151 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y~ 151 (239)
+.+ .|+++-.+.||.+-.+....... ............ ...-+...+|+|+++++++... -.-| +..
T Consensus 167 A~ela~~gIrVN~I~PG~i~T~~~~~~~~---~~~~~~~~~~~~----~l~r~~~pedvA~~v~fL~S~~s~~itG~~i~ 239 (247)
T d2ew8a1 167 ASDLGKDGITVNAIAPSLVRTATTEASAL---SAMFDVLPNMLQ----AIPRLQVPLDLTGAAAFLASDDASFITGQTLA 239 (247)
T ss_dssp HHHHGGGTEEEEEEEECCC---------------------CTTS----SSCSCCCTHHHHHHHHHHTSGGGTTCCSCEEE
T ss_pred HHHhcccCeEEEEEeeCCCCCcccccccc---chhHHHHHHHhc----cCCCCCCHHHHHHHHHHHhCchhcCCcCCeEE
Confidence 765 47899999999886543211100 000111111100 1112566899999999988532 2234 555
Q ss_pred Eec
Q 026418 152 CAE 154 (239)
Q Consensus 152 ~~~ 154 (239)
+.|
T Consensus 240 vDG 242 (247)
T d2ew8a1 240 VDG 242 (247)
T ss_dssp ESS
T ss_pred ECC
Confidence 543
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.58 E-value=0.00076 Score=49.59 Aligned_cols=117 Identities=16% Similarity=0.138 Sum_probs=77.2
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..+.+++. +.+-.++|++||.++..+. .....|+.+|...+.+.+.+
T Consensus 108 ~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~---------------------~~~~~Y~asKaal~~ltk~l 166 (244)
T d1nffa_ 108 LDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGT---------------------VACHGYTATKFAVRGLTKST 166 (244)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------------------TTBHHHHHHHHHHHHHHHHH
T ss_pred hhcccchhhHHHHHHHhHHHhcCcceEEecccccccccc---------------------ccccchhhHHHHHHHHHHHH
Confidence 6789999988887663 3345689999997433211 12467999999999999888
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eEE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYL 151 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y~ 151 (239)
+.+ .|+++-.+-|+.+-.+.... ........+ ..-+...+|+|+++.+++... -.-| ++.
T Consensus 167 A~el~~~gIrVN~I~PG~i~T~~~~~------------~~~~~~~~p--l~R~~~p~diA~~v~fL~s~~s~~itG~~i~ 232 (244)
T d1nffa_ 167 ALELGPSGIRVNSIHPGLVKTPMTDW------------VPEDIFQTA--LGRAAEPVEVSNLVVYLASDESSYSTGAEFV 232 (244)
T ss_dssp HHHHGGGTEEEEEEEECCBCSGGGTT------------SCTTCSCCS--SSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHhcccCEEEEEEeeCCccChhHhh------------hhHHHHhcc--ccCCCCHHHHHHHHHHHhChhhCCCcCCEEE
Confidence 766 47999999999886442110 000000011 123778999999999988532 2334 555
Q ss_pred Ee
Q 026418 152 CA 153 (239)
Q Consensus 152 ~~ 153 (239)
+.
T Consensus 233 vD 234 (244)
T d1nffa_ 233 VD 234 (244)
T ss_dssp ES
T ss_pred EC
Confidence 54
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=97.58 E-value=0.00058 Score=50.71 Aligned_cols=114 Identities=14% Similarity=0.150 Sum_probs=74.3
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..+.+++. +.+..++|++||.++.-+. .....|+.+|...+.+.+.+
T Consensus 112 ~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~---------------------~~~~~Y~~sK~al~~lt~~l 170 (258)
T d1ae1a_ 112 MGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSAL---------------------PSVSLYSASKGAINQMTKSL 170 (258)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred hhhcccccccccccccccccccccccccccccccccccc---------------------ccchhHHHHHHHHHHHHHHH
Confidence 6789999988887664 3346799999997332211 12567999999999999988
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCC---hhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhc
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVN---ASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYE 142 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~ 142 (239)
+++ .|+++-.+.||.+..+....... .....+..+....+. .-+...+|+|.++.+++.
T Consensus 171 A~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl------gR~~~pediA~~v~fL~S 235 (258)
T d1ae1a_ 171 ACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPM------GRAGKPQEVSALIAFLCF 235 (258)
T ss_dssp HHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTT------CSCBCHHHHHHHHHHHHS
T ss_pred HHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCC------CCCcCHHHHHHHHHHHhC
Confidence 776 37899999999997653211100 112233333332221 236789999999999885
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=97.56 E-value=0.00074 Score=49.89 Aligned_cols=125 Identities=14% Similarity=0.067 Sum_probs=79.7
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..+.+++. +.+-.++|++||.++..+. .....|+.+|...+.+.+.+
T Consensus 100 ~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~---------------------~~~~~Y~asKaal~~lt~~l 158 (252)
T d1zmta1 100 VEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPW---------------------KELSTYTSARAGACTLANAL 158 (252)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHhhcccccceeeccccccccccc---------------------ccccccccccccHHHHHHHH
Confidence 5789888888887763 4445689999996332211 12467999999999999888
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCCh-----hHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC--CC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNA-----SIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--AS 147 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~ 147 (239)
+.+ .|+++-.+.|+.+-.+........ ....+..+.+..+. .-+...+|+|.++++++.... .-
T Consensus 159 A~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl------~R~g~pedvA~~v~fL~S~~s~~iT 232 (252)
T d1zmta1 159 SKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTAL------QRLGTQKELGELVAFLASGSCDYLT 232 (252)
T ss_dssp HHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSS------SSCBCHHHHHHHHHHHHTTSCGGGT
T ss_pred HHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCC------CCCcCHHHHHHHHHHHhCchhcCCc
Confidence 765 479999999999866542221110 11222333332221 225678999999999886432 23
Q ss_pred c-eEEEe
Q 026418 148 G-RYLCA 153 (239)
Q Consensus 148 ~-~y~~~ 153 (239)
| +..+.
T Consensus 233 G~~i~vd 239 (252)
T d1zmta1 233 GQVFWLA 239 (252)
T ss_dssp TCEEEES
T ss_pred CCeEEEC
Confidence 4 55554
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.56 E-value=0.00063 Score=50.39 Aligned_cols=125 Identities=17% Similarity=0.118 Sum_probs=80.8
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..+.+++.. .+-.++|++||.++..+. .....|+.+|...+.+.+.+
T Consensus 115 ~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~---------------------~~~~~Y~asKaal~~lt~~l 173 (255)
T d1fmca_ 115 YELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKN---------------------INMTSYASSKAAASHLVRNM 173 (255)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhHHHHHhhhccccccccccccccchhccc---------------------cccccchhHHHHHHHHHHHH
Confidence 67899998888876643 344578999996332211 12467999999999999888
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eEE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYL 151 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y~ 151 (239)
+.+ .|+++-.+-||.+-.+...... .......+.+..+. .-+...+|+|.++.+++... -.-| +..
T Consensus 174 A~el~~~gIrVN~I~PG~i~T~~~~~~~--~~e~~~~~~~~~pl------~R~g~pedvA~~v~fL~S~~s~~itG~~i~ 245 (255)
T d1fmca_ 174 AFDLGEKNIRVNGIAPGAILTDALKSVI--TPEIEQKMLQHTPI------RRLGQPQDIANAALFLCSPAASWVSGQILT 245 (255)
T ss_dssp HHHHHTTTEEEEEEEECSBCSHHHHTTC--CHHHHHHHHHTCSS------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHhCccCeEEEEeeeCcCcChHhhccC--CHHHHHHHHhcCCC------CCCcCHHHHHHHHHHHhCchhcCCcCCEEE
Confidence 765 4789999999998654221111 12233344433321 23567899999999988532 2334 555
Q ss_pred EecC
Q 026418 152 CAES 155 (239)
Q Consensus 152 ~~~~ 155 (239)
+.|.
T Consensus 246 vDGG 249 (255)
T d1fmca_ 246 VSGG 249 (255)
T ss_dssp ESTT
T ss_pred ECcC
Confidence 5544
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=97.55 E-value=0.00053 Score=50.95 Aligned_cols=115 Identities=14% Similarity=0.158 Sum_probs=75.2
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..+.+++.+ .+-.++|++||.++..+.+ ....|+.+|...+.+.+.+
T Consensus 111 ~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~---------------------~~~~Y~asKaal~~ltk~l 169 (260)
T d1zema1 111 LTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPP---------------------NMAAYGTSKGAIIALTETA 169 (260)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCT---------------------TBHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCc---------------------chHHHHHHHHHHHHHHHHH
Confidence 67899999888887743 3457899999974443211 2467999999999999888
Q ss_pred HHHc---CccEEEEecCcccCCCC-------------CCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhh
Q 026418 78 AVAR---GVDLVVVNPVLVLGPLL-------------QSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVY 141 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~ 141 (239)
+.+. |+++..+-||.+--+.. .............+....+ ..-+...+|+|.++++++
T Consensus 170 A~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P------l~R~g~pedvA~~v~fL~ 243 (260)
T d1zema1 170 ALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVP------MRRYGDINEIPGVVAFLL 243 (260)
T ss_dssp HHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTST------TSSCBCGGGSHHHHHHHH
T ss_pred HHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCC------CCCCcCHHHHHHHHHHHh
Confidence 7764 78999999999854310 0000111112222222222 123567899999999988
Q ss_pred cC
Q 026418 142 ET 143 (239)
Q Consensus 142 ~~ 143 (239)
..
T Consensus 244 S~ 245 (260)
T d1zema1 244 GD 245 (260)
T ss_dssp SG
T ss_pred Cc
Confidence 53
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=97.55 E-value=0.00022 Score=52.64 Aligned_cols=110 Identities=15% Similarity=0.061 Sum_probs=74.8
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..+.+++. +.+-.++|++||.++..+.+ ....|+.+|...+.+.+.+
T Consensus 107 ~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~---------------------~~~~Y~asKaal~~ltk~l 165 (244)
T d1edoa_ 107 IDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNI---------------------GQANYAAAKAGVIGFSKTA 165 (244)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT---------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCC---------------------CCHHHHHHHHHHHHChHHH
Confidence 6789999888887764 34457999999975554321 2467999999999999888
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhh
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVY 141 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~ 141 (239)
+.+ .|+++-.+.||.+--+.... ........+....+. .-+...+|+|+++.+++
T Consensus 166 A~el~~~gIrvN~I~PG~i~T~~~~~---~~~~~~~~~~~~~pl------~R~~~p~dvA~~v~fLa 223 (244)
T d1edoa_ 166 AREGASRNINVNVVCPGFIASDMTAK---LGEDMEKKILGTIPL------GRTGQPENVAGLVEFLA 223 (244)
T ss_dssp HHHHHTTTEEEEEEEECSBCSHHHHT---TCHHHHHHHHTSCTT------CSCBCHHHHHHHHHHHH
T ss_pred HHHHhhhCcEEEEEecceeccHHHHH---hhHHHHHHHHhcCCC------CCCcCHHHHHHHHHHHH
Confidence 776 48999999999885332110 111222333332221 23567899999999875
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=97.53 E-value=0.0009 Score=49.50 Aligned_cols=120 Identities=16% Similarity=0.075 Sum_probs=76.9
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..+.+++. +.+-.++|++||.++..+. .....|+.+|...+.+.+.+
T Consensus 107 ~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~---------------------~~~~~Y~asKaal~~lt~~l 165 (254)
T d1hdca_ 107 VEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGL---------------------ALTSSYGASKWGVRGLSKLA 165 (254)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred hhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccc---------------------cchhhHHHHHHHHHHHHHHH
Confidence 6789999988888774 3445799999997443321 12467999999999999888
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCC-ccCCCCCC-c-eehHHHHHHHHHhhcCC--CCCc-
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAK-TYANSVQA-Y-VHVRDVALAHILVYETP--SASG- 148 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~-i~v~D~a~~~~~~~~~~--~~~~- 148 (239)
+.+ .|+++-.+-||.+--+ +.......... ........ + ...+|+|.++++++... -.-|
T Consensus 166 A~e~a~~gIrVN~I~PG~v~T~-----------~~~~~~~~~~~~~~~~~pl~R~g~~PedvA~~v~fL~S~~a~~itG~ 234 (254)
T d1hdca_ 166 AVELGTDRIRVNSVHPGMTYTP-----------MTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGA 234 (254)
T ss_dssp HHHHGGGTEEEEEEEECSBCCH-----------HHHHHTCCCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGGGTTCCSC
T ss_pred HHHhCCCceEEEEeeeCcccCc-----------cchhcCHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHhchhhCCCCCc
Confidence 765 4789999999988432 12222111111 11111111 2 35799999999988532 2334
Q ss_pred eEEEe
Q 026418 149 RYLCA 153 (239)
Q Consensus 149 ~y~~~ 153 (239)
++.+.
T Consensus 235 ~i~vD 239 (254)
T d1hdca_ 235 ELAVD 239 (254)
T ss_dssp EEEES
T ss_pred eEEeC
Confidence 56555
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=97.50 E-value=0.0003 Score=52.39 Aligned_cols=114 Identities=13% Similarity=0.127 Sum_probs=71.1
Q ss_pred chhHhHHHHHHHHHH----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..+.+++ ++.+-.++|++||.++..+. .....|+.+|...+.+.+.+
T Consensus 111 ~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~---------------------~~~~~Y~asKaal~~lt~~l 169 (260)
T d1x1ta1 111 LALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVAS---------------------ANKSAYVAAKHGVVGFTKVT 169 (260)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred hhccccccccccchhhhhHhhcCCceEeecccccceecc---------------------CCcchhhhhhhhHHHhHHHH
Confidence 678988888877766 44445689999997444321 12467999999999999888
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCc--------c--CCCCCCceehHHHHHHHHHhhcC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKT--------Y--ANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--------~--~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
+.+ .|+++..+.||.+--+..... +.......... + .....-+...+|+|+++++++..
T Consensus 170 A~el~~~gIrVN~I~PG~i~T~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S~ 241 (260)
T d1x1ta1 170 ALETAGQGITANAICPGWVRTPLVEKQ-------ISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLASD 241 (260)
T ss_dssp HHHHTTTTEEEEEEEECCBCC-------------------------------CHHHHCTTCCCBCHHHHHHHHHHHHSG
T ss_pred HHHhchhCcEEEEEecCCCCChhhhhh-------hhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCh
Confidence 776 478999999998854422111 11100000000 0 00112367799999999998853
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=97.48 E-value=0.0017 Score=47.51 Aligned_cols=121 Identities=15% Similarity=0.093 Sum_probs=79.2
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..+.+++.+ .+-..++.+|| ....+. .....|+.+|...+.+.+.+
T Consensus 105 ~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss-~~~~~~---------------------~~~~~Y~asKaal~~ltk~l 162 (242)
T d1ulsa_ 105 LRVNLTGSFLVAKAASEAMREKNPGSIVLTAS-RVYLGN---------------------LGQANYAASMAGVVGLTRTL 162 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCCEEEEEECC-GGGGCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred ccccchhhhhhhhhccccccccccceeeeecc-ccccCC---------------------CCCcchHHHHHHHHHHHHHH
Confidence 67899999988887754 34566777777 343321 12467999999999998888
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eEE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYL 151 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y~ 151 (239)
+.+ .|+++-.+.||.+--+.... ........+....+. .-+...+|+|+++.+++... -.-| ++.
T Consensus 163 A~ela~~gIrVN~I~PG~v~T~~~~~---~~~~~~~~~~~~~pl------~R~~~pedia~~v~fL~S~~s~~itG~~i~ 233 (242)
T d1ulsa_ 163 ALELGRWGIRVNTLAPGFIETRMTAK---VPEKVREKAIAATPL------GRAGKPLEVAYAALFLLSDESSFITGQVLF 233 (242)
T ss_dssp HHHHGGGTEEEEEEEECSBCCTTTSS---SCHHHHHHHHHTCTT------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHHhhhCcEEEEEeeCcccChhhhc---CCHHHHHHHHhcCCC------CCCCCHHHHHHHHHHHhchhhCCCCCcEEE
Confidence 765 37999999999996554321 122333444443331 23556899999999988532 2334 444
Q ss_pred Ee
Q 026418 152 CA 153 (239)
Q Consensus 152 ~~ 153 (239)
+.
T Consensus 234 vD 235 (242)
T d1ulsa_ 234 VD 235 (242)
T ss_dssp ES
T ss_pred EC
Confidence 44
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.46 E-value=0.00057 Score=51.96 Aligned_cols=102 Identities=14% Similarity=0.058 Sum_probs=70.9
Q ss_pred CchhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 1 MVEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 1 ~~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
++++|+.++..+.+++. +.+-.++|++||.++.++.+ ....|+.+|...+.+.+.
T Consensus 117 ~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~---------------------~~~~Y~asKaal~~lt~~ 175 (302)
T d1gz6a_ 117 IQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNF---------------------GQANYSAAKLGLLGLANT 175 (302)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT---------------------TCHHHHHHHHHHHHHHHH
T ss_pred hhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCC---------------------CcHHHHHHHHHHHHHHHH
Confidence 36789999999888764 44557999999986665432 246799999999999988
Q ss_pred HHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhc
Q 026418 77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYE 142 (239)
Q Consensus 77 ~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~ 142 (239)
++.+ .|+++..+-|+.+--.... ....-+. .++..+|+|.++++++.
T Consensus 176 la~E~~~~gIrVN~I~PG~~~t~~~~----~~~~~~~---------------~~~~PedvA~~v~fL~S 225 (302)
T d1gz6a_ 176 LVIEGRKNNIHCNTIAPNAGSRMTET----VMPEDLV---------------EALKPEYVAPLVLWLCH 225 (302)
T ss_dssp HHHHTGGGTEEEEEEEEECCSTTTGG----GSCHHHH---------------HHSCGGGTHHHHHHHTS
T ss_pred HHHHHhccCCceeeeCCCCCCcchhh----cCcHhhH---------------hcCCHHHHHHHHHHHcC
Confidence 8776 4789999999876322110 0001111 12346899999999875
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=97.45 E-value=0.00048 Score=51.17 Aligned_cols=115 Identities=15% Similarity=0.165 Sum_probs=75.0
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..+.+++. +.+-.++|++||.++..+. .....|+.+|...+.+.+.+
T Consensus 112 ~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~---------------------~~~~~Y~asKaal~~lt~~l 170 (258)
T d1iy8a_ 112 VSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGI---------------------GNQSGYAAAKHGVVGLTRNS 170 (258)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBC---------------------SSBHHHHHHHHHHHHHHHHH
T ss_pred hhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCC---------------------CCchHHHHHHHHHHHHHHHH
Confidence 6789999999888763 3345689999997443321 12577999999999998888
Q ss_pred HHH---cCccEEEEecCcccCCCCCC-----CCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQS-----TVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
+.+ .|+++-.+.||.+..+.... ...........+....+ ..-+...+|+|+++++++..
T Consensus 171 A~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p------l~R~~~p~dvA~~v~fL~S~ 238 (258)
T d1iy8a_ 171 AVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNP------SKRYGEAPEIAAVVAFLLSD 238 (258)
T ss_dssp HHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCT------TCSCBCHHHHHHHHHHHTSG
T ss_pred HHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCC------CCCCcCHHHHHHHHHHHhCc
Confidence 765 47999999999985431000 00000111222222222 12356789999999998853
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=97.41 E-value=0.00067 Score=50.39 Aligned_cols=112 Identities=14% Similarity=0.170 Sum_probs=64.4
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..+.+++. +.+-.++|++||.++..+. .....|+.+|...+.+.+.+
T Consensus 114 ~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~---------------------~~~~~Y~asKaal~~lt~~l 172 (259)
T d1xq1a_ 114 ISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSA---------------------SVGSIYSATKGALNQLARNL 172 (259)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-------------------------------CCHHHHHHHHHHHHHHHH
T ss_pred HHHHhhhheeeehhhhhcccccccccccccccccccccc---------------------cccccccccccchhhhhHHH
Confidence 6789999988888764 3445689999997433221 12467999999999998888
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhc
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYE 142 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~ 142 (239)
+.+ .|+++-.+-||.+--+...... .......+.... | ..-+...+|+|.++++++.
T Consensus 173 A~e~~~~gIrVN~V~PG~i~T~~~~~~~--~~~~~~~~~~~~----p--l~R~~~pedvA~~v~fL~S 232 (259)
T d1xq1a_ 173 ACEWASDGIRANAVAPAVIATPLAEAVY--DDEFKKVVISRK----P--LGRFGEPEEVSSLVAFLCM 232 (259)
T ss_dssp HHHHGGGTCEEEEEECCSCC---------------------------------CCGGGGHHHHHHHTS
T ss_pred HHHhcccCeEEEEeccCcccCHHhhhhc--hHHHHHHHHhCC----C--CCCCcCHHHHHHHHHHHhC
Confidence 765 4799999999988544321100 000111111111 1 1225668899999999885
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=97.40 E-value=0.00078 Score=49.17 Aligned_cols=123 Identities=23% Similarity=0.157 Sum_probs=79.7
Q ss_pred chhHhHHHHHHHHHHHhc----------CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----------KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAE 71 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----------~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E 71 (239)
+++|+.+...+..++... +-.++|++||.++..+.+ ....|+.+|...+
T Consensus 97 ~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~---------------------~~~~Y~asKaal~ 155 (241)
T d1uaya_ 97 LEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQI---------------------GQAAYAASKGGVV 155 (241)
T ss_dssp HHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCT---------------------TCHHHHHHHHHHH
T ss_pred HHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCC---------------------CchhhHHHHHHHH
Confidence 567888888877766432 235899999974444221 2567999999999
Q ss_pred HHHHHHHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCc
Q 026418 72 KAAWEEAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASG 148 (239)
Q Consensus 72 ~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~ 148 (239)
.+.+.++.+ .|+++-.+-||.+--+..... .......+....++. .-+...+|+|.++.+++...-.-|
T Consensus 156 ~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~---~~~~~~~~~~~~~~~-----~R~g~pedvA~~v~fL~s~~~iTG 227 (241)
T d1uaya_ 156 ALTLPAARELAGWGIRVVTVAPGLFDTPLLQGL---PEKAKASLAAQVPFP-----PRLGRPEEYAALVLHILENPMLNG 227 (241)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTS---CHHHHHHHHTTCCSS-----CSCCCHHHHHHHHHHHHHCTTCCS
T ss_pred HHHHHHHHHHhhcCCceeeecCCcccccccchh---hhhHHHHHHhcCCCC-----CCCcCHHHHHHHHHHHHhCCCCCC
Confidence 999988875 479999999999864321111 112223333333221 124468999999999887544445
Q ss_pred -eEEEe
Q 026418 149 -RYLCA 153 (239)
Q Consensus 149 -~y~~~ 153 (239)
+..+.
T Consensus 228 ~~i~VD 233 (241)
T d1uaya_ 228 EVVRLD 233 (241)
T ss_dssp CEEEES
T ss_pred CEEEEC
Confidence 55554
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.37 E-value=0.0014 Score=48.16 Aligned_cols=114 Identities=18% Similarity=0.154 Sum_probs=75.0
Q ss_pred chhHhHHHHHHHHHHHh-----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE-----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~-----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++..+.+++.+ .+-.++|++||.++..+. .....|+.+|...+.+.+.
T Consensus 104 ~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~---------------------~~~~~Y~asKaal~~lt~~ 162 (244)
T d1pr9a_ 104 FEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAV---------------------TNHSVYCSTKGALDMLTKV 162 (244)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC---------------------TTBHHHHHHHHHHHHHHHH
T ss_pred HHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccc---------------------cchhhhhhhHHHHHHHHHH
Confidence 67899988888776543 235789999996332211 1246799999999999988
Q ss_pred HHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 77 ~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
++.+ .|+++-.+.||.+.-+...... ........+.+..+. .-+...+|+|+++.+++..
T Consensus 163 lA~el~~~gIrvN~I~PG~v~T~~~~~~~-~~~~~~~~~~~~~pl------~R~~~peevA~~v~fL~S~ 225 (244)
T d1pr9a_ 163 MALELGPHKIRVNAVNPTVVMTSMGQATW-SDPHKAKTMLNRIPL------GKFAEVEHVVNAILFLLSD 225 (244)
T ss_dssp HHHHHGGGTEEEEEEEECCBCSHHHHTTS-CSHHHHHHHHTTCTT------CSCBCHHHHHHHHHHHHSG
T ss_pred HHHHhCCCcEEEEEEeeCcCcChHHhhhc-cChHHHHHHHhcCCC------CCCcCHHHHHHHHHHHhCc
Confidence 8765 4789999999988654211111 111223333333221 2366789999999998853
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=97.37 E-value=0.0011 Score=48.84 Aligned_cols=115 Identities=12% Similarity=0.036 Sum_probs=75.0
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..+.+++.+ .+-.++|++||..+..... .....|+.+|...+.+.+.+
T Consensus 111 ~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~--------------------~~~~~Y~asKaal~~lt~~l 170 (251)
T d1vl8a_ 111 IEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTM--------------------PNISAYAASKGGVASLTKAL 170 (251)
T ss_dssp HHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCS--------------------SSCHHHHHHHHHHHHHHHHH
T ss_pred HHhhhhhhhhhhhhhhhcccccccccccccccchhccccC--------------------ccccchHHHHHhHHHHHHHH
Confidence 67899999888887643 3456899999852211110 12467999999999999888
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
+.+ .|+++-.+.||.+-.+..... .........+.+..+. .-+...+|+|+++++++..
T Consensus 171 A~e~~~~gIrVN~I~PG~i~T~~~~~~-~~~~~~~~~~~~~~pl------~R~~~pedvA~~v~fL~S~ 232 (251)
T d1vl8a_ 171 AKEWGRYGIRVNVIAPGWYRTKMTEAV-FSDPEKLDYMLKRIPL------GRTGVPEDLKGVAVFLASE 232 (251)
T ss_dssp HHHHGGGTCEEEEEEECCBCSTTTHHH-HTCHHHHHHHHHTCTT------SSCBCGGGGHHHHHHHHSG
T ss_pred HHHhcccCeEEEEEeeCcccCHHHHhc-cCCHHHHHHHHhcCCC------CCCCCHHHHHHHHHHHhCc
Confidence 765 479999999999865432110 0001233334333321 2345688999999998853
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=97.36 E-value=0.00075 Score=49.75 Aligned_cols=125 Identities=12% Similarity=0.061 Sum_probs=77.1
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++.++.+++.+ .+-.++|++||.++..+. .....|+.+|...+.+.+.+
T Consensus 104 ~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~---------------------~~~~~Y~asKaal~~ltk~l 162 (248)
T d2d1ya1 104 LEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAE---------------------QENAAYNASKGGLVNLTRSL 162 (248)
T ss_dssp HHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBC---------------------TTBHHHHHHHHHHHHHHHHH
T ss_pred HHhhhhhHhhhhhhhcccccccccccccccccccccccc---------------------cccchhHHHHHHHHHHHHHH
Confidence 67899999988888743 345689999997443321 12567999999999998888
Q ss_pred HHH---cCccEEEEecCcccCCCCCC---CCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQS---TVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG- 148 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~- 148 (239)
+.+ .|+++-.+.||.+-.+.... ...........+.+..+ ..-+...+|+|+++.+++... -.-|
T Consensus 163 A~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p------l~R~~~pedia~~v~fL~S~~s~~itG~ 236 (248)
T d2d1ya1 163 ALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHA------LRRLGKPEEVAEAVLFLASEKASFITGA 236 (248)
T ss_dssp HHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTST------TSSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred HHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCC------CCCCcCHHHHHHHHHHHhCchhcCCCCc
Confidence 766 47899999999884321000 00000000111111111 123667899999999988532 2334
Q ss_pred eEEEe
Q 026418 149 RYLCA 153 (239)
Q Consensus 149 ~y~~~ 153 (239)
++.+.
T Consensus 237 ~i~vD 241 (248)
T d2d1ya1 237 ILPVD 241 (248)
T ss_dssp EEEES
T ss_pred EEEcC
Confidence 55554
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=97.36 E-value=0.0007 Score=50.11 Aligned_cols=123 Identities=13% Similarity=0.054 Sum_probs=78.3
Q ss_pred chhHhHHHHHHHHHHHhc------C-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA------K-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAA 74 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~------~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~ 74 (239)
+++|+.|+.++.+++.+. + -.++|++||.++.++. .....|+.+|.....+.
T Consensus 104 ~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~---------------------~~~~~Y~asKaal~~~t 162 (254)
T d1sbya1 104 IAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAI---------------------HQVPVYSASKAAVVSFT 162 (254)
T ss_dssp HHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC---------------------TTSHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCC---------------------CCCHHHHHHHHHHHHHH
Confidence 679999999998877542 1 3579999997443321 12567999999999888
Q ss_pred HHHHHH---cCccEEEEecCcccCCCCCC--CCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCCCCce
Q 026418 75 WEEAVA---RGVDLVVVNPVLVLGPLLQS--TVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGR 149 (239)
Q Consensus 75 ~~~~~~---~~~~~~i~Rp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~ 149 (239)
+.++.+ .|+++..+.||.+..+-... ........+.... ..+...-.+++|++++.++.....+.+
T Consensus 163 ~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~e~va~~~~~~~~~~~tG~v 233 (254)
T d1sbya1 163 NSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELL---------LSHPTQTSEQCGQNFVKAIEANKNGAI 233 (254)
T ss_dssp HHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHH---------TTSCCEEHHHHHHHHHHHHHHCCTTCE
T ss_pred HHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhcc---------ccCCCCCHHHHHHHHHHhhhCCCCCCE
Confidence 887765 48999999999996431000 0000000001110 122345688999999988876554336
Q ss_pred EEEec
Q 026418 150 YLCAE 154 (239)
Q Consensus 150 y~~~~ 154 (239)
+.+.|
T Consensus 234 i~vdg 238 (254)
T d1sbya1 234 WKLDL 238 (254)
T ss_dssp EEEET
T ss_pred EEECC
Confidence 76664
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=97.34 E-value=0.00078 Score=49.91 Aligned_cols=126 Identities=16% Similarity=0.077 Sum_probs=79.5
Q ss_pred chhHhHHHHHHHHHHHh------cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE------AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAW 75 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~------~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~ 75 (239)
+++|+.++..+.+++.+ .+-.++|++||.++..+. .....|+.+|...+.+.+
T Consensus 107 ~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~---------------------~~~~~Y~asKaal~~ltk 165 (257)
T d2rhca1 107 VETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGV---------------------VHAAPYSASKHGVVGFTK 165 (257)
T ss_dssp HHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCC---------------------TTCHHHHHHHHHHHHHHH
T ss_pred HHHHhhhhhHHHHHHhHHHHHHhcCCccccccccccccccc---------------------ccchhHHHHHHHHHHHHH
Confidence 68999999999998854 244689999996333221 124679999999999999
Q ss_pred HHHHHc---CccEEEEecCcccCCCCCC--------CCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 76 EEAVAR---GVDLVVVNPVLVLGPLLQS--------TVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 76 ~~~~~~---~~~~~i~Rp~~v~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
.++.+. |+++-.+.||.+--+.... ........+..+.+..+ ..-+...+|+|+++++++...
T Consensus 166 ~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~P------lgR~~~pedia~~v~fL~S~~ 239 (257)
T d2rhca1 166 ALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVP------IGRYVQPSEVAEMVAYLIGPG 239 (257)
T ss_dssp HHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTST------TSSCBCHHHHHHHHHHHTSGG
T ss_pred HHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCC------CCCCcCHHHHHHHHHHHhCch
Confidence 988774 6888899999884321000 00001112222222221 123677999999999988532
Q ss_pred --CCCc-eEEEec
Q 026418 145 --SASG-RYLCAE 154 (239)
Q Consensus 145 --~~~~-~y~~~~ 154 (239)
..-| ++.+.|
T Consensus 240 s~~itG~~i~vDG 252 (257)
T d2rhca1 240 AAAVTAQALNVCG 252 (257)
T ss_dssp GTTCCSCEEEEST
T ss_pred hcCCcCceEEECc
Confidence 2334 455543
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=97.29 E-value=0.00098 Score=49.44 Aligned_cols=115 Identities=14% Similarity=0.103 Sum_probs=75.3
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..+.+++. +.+-.++|++||.++..+. .....|+.+|...+.+.+.+
T Consensus 114 ~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~---------------------~~~~~Y~asKaal~~lt~~l 172 (259)
T d2ae2a_ 114 MSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAV---------------------PYEAVYGATKGAMDQLTRCL 172 (259)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred HhcccceeEEEEeeccchhhhhccccccccccccccccc---------------------ccccchHHHHHHHHHHHHHH
Confidence 6789999988887764 3445789999996332211 12467999999999999988
Q ss_pred HHH---cCccEEEEecCcccCCCCCC--CCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQS--TVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
+.+ .|+++-.+-|+.+--+.... ........+.++....+. .-+...+|+|+++++++..
T Consensus 173 A~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl------~R~g~pedvA~~v~fL~S~ 237 (259)
T d2ae2a_ 173 AFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCAL------RRMGEPKELAAMVAFLCFP 237 (259)
T ss_dssp HHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTT------CSCBCHHHHHHHHHHHHSG
T ss_pred HHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCC------CCCcCHHHHHHHHHHHhCc
Confidence 876 47899999999885432100 000111223333333321 2356789999999998853
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=97.28 E-value=0.0026 Score=46.94 Aligned_cols=125 Identities=15% Similarity=0.054 Sum_probs=76.6
Q ss_pred chhHhHHHHHHHHHHH----hcC-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++..+.+++. +.+ -.++|++||.++..+. .....|+.+|...+.+.+.
T Consensus 106 ~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~---------------------~~~~~Y~asKaal~~ltk~ 164 (255)
T d1gega_ 106 YNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGN---------------------PELAVYSSSKFAVRGLTQT 164 (255)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC---------------------TTBHHHHHHHHHHHHHHHH
T ss_pred hhhcccchhhhhhhhcchhhhhccccccccccchhhcccC---------------------cccccchhCHHHHHhhHHH
Confidence 6789999999888763 333 4679999996332211 1246799999999999888
Q ss_pred HHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHH--cCCCCc-----c-C-CCCCCceehHHHHHHHHHhhcCC
Q 026418 77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYL--NGSAKT-----Y-A-NSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 77 ~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~--~~~~~~-----~-~-~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
++.+ .|+++-.+.||.+--+. ......... .+.... + . ....-+...+|+|+++++++...
T Consensus 165 lA~el~~~gIrVN~I~PG~i~T~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~ 237 (255)
T d1gega_ 165 AARDLAPLGITVNGYCPGIVKTPM-------WAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPD 237 (255)
T ss_dssp HHHHHGGGTEEEEEEEECSBSSHH-------HHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHhhhhCcEEEEEecCcccChH-------HhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence 8765 48999999999884321 111111111 011100 0 0 01123677999999999988532
Q ss_pred --CCCc-eEEEec
Q 026418 145 --SASG-RYLCAE 154 (239)
Q Consensus 145 --~~~~-~y~~~~ 154 (239)
-.-| ++.+.|
T Consensus 238 a~~itG~~i~vDG 250 (255)
T d1gega_ 238 SDYMTGQSLLIDG 250 (255)
T ss_dssp GTTCCSCEEEESS
T ss_pred hCCccCcEEEecC
Confidence 2234 555543
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.25 E-value=0.0011 Score=48.90 Aligned_cols=124 Identities=16% Similarity=0.166 Sum_probs=78.8
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..+.+++. +.+ .++|++||.++..+. .....|+.+|...+.+.+.+
T Consensus 108 ~~vNl~g~~~~~~~~~p~m~~~~-G~Ii~isS~~~~~~~---------------------~~~~~Y~asKaal~~lt~~l 165 (250)
T d1ydea1 108 LELNLLGTYTLTKLALPYLRKSQ-GNVINISSLVGAIGQ---------------------AQAVPYVATKGAVTAMTKAL 165 (250)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCHHHHHCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhhhhHHHHHHHhhHHHHhCC-CCCcccccccccccc---------------------cCcchhHHHHhhHHHHHHHH
Confidence 6789999988888774 333 589999997444321 12467999999999999888
Q ss_pred HHH---cCccEEEEecCcccCCCCC---CCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC-CCCc-e
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQ---STVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP-SASG-R 149 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~-~~~~-~ 149 (239)
+.+ .|+++-.+.||.+--+... .........+.......+ ..-+...+|+|.++++++... -.-| +
T Consensus 166 A~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~p------l~R~g~p~eva~~v~fL~Sda~~itG~~ 239 (250)
T d1ydea1 166 ALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQP------LGRMGQPAEVGAAAVFLASEANFCTGIE 239 (250)
T ss_dssp HHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTST------TSSCBCHHHHHHHHHHHHHHCTTCCSCE
T ss_pred HHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCC------CCCCCCHHHHHHHHHHHhCccCCCcCCe
Confidence 775 4799999999988432100 000011122333333222 123667899999999887532 2234 5
Q ss_pred EEEe
Q 026418 150 YLCA 153 (239)
Q Consensus 150 y~~~ 153 (239)
+.+.
T Consensus 240 i~vD 243 (250)
T d1ydea1 240 LLVT 243 (250)
T ss_dssp EEES
T ss_pred EEEC
Confidence 5554
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=97.24 E-value=0.0037 Score=46.09 Aligned_cols=124 Identities=15% Similarity=0.116 Sum_probs=76.3
Q ss_pred chhHhHHHHHHHHHHHh----cC-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++..+.+++.. .+ -.++|++||.++..+. .....|+.+|...+.+.+.
T Consensus 107 ~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~---------------------~~~~~Y~asKaal~~lt~~ 165 (256)
T d1k2wa_ 107 FAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGE---------------------ALVGVYCATKAAVISLTQS 165 (256)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC---------------------TTCHHHHHHHHHHHHHHHH
T ss_pred hceeeeccccchhhccchhHHhccCCccccccchhhcccc---------------------ccccchhhhhhHHHHHHHH
Confidence 67899999988876532 22 4689999996333211 1246799999999999988
Q ss_pred HHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHc--CCCCc-----c--CCCCCCceehHHHHHHHHHhhcCC
Q 026418 77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLN--GSAKT-----Y--ANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 77 ~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~--~~~~~-----~--~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
++.+ .|+++-.+.||.+-.+.. ........+ +.... + .....-+...+|+|.++++++...
T Consensus 166 lA~el~~~gIrVN~V~PG~i~T~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p~evA~~v~fL~S~~ 238 (256)
T d1k2wa_ 166 AGLNLIRHGINVNAIAPGVVDGEHW-------DGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLATPE 238 (256)
T ss_dssp HHHHHGGGTEEEEEEEECCBCCTTH-------HHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCHHHHHHHHHHTTSGG
T ss_pred HHHHhcccCeEEEEEecCCCCchhh-------hhhhhhhhhhccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence 8765 478999999998865421 011111110 00000 0 001123667899999999987532
Q ss_pred --CCCc-eEEEe
Q 026418 145 --SASG-RYLCA 153 (239)
Q Consensus 145 --~~~~-~y~~~ 153 (239)
-.-| ++.+.
T Consensus 239 a~~iTG~~i~vD 250 (256)
T d1k2wa_ 239 ADYIVAQTYNVD 250 (256)
T ss_dssp GTTCCSCEEEES
T ss_pred hCCccCceEEEC
Confidence 2234 55554
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=97.23 E-value=0.0013 Score=48.73 Aligned_cols=124 Identities=12% Similarity=0.030 Sum_probs=76.8
Q ss_pred chhHhHHHHHHHHHHH----hcC-CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~-v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++..+.+++. +.+ -..+|++||.++..+. .....|+.+|...+.+.+.
T Consensus 113 ~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~---------------------~~~~~Y~asKaal~~lt~~ 171 (261)
T d1geea_ 113 IDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPW---------------------PLFVHYAASKGGMKLMTET 171 (261)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC---------------------TTCHHHHHHHHHHHHHHHH
T ss_pred HHHhcccchhHHHHHhhhhccccccccccccccchhcccC---------------------ccccccccCCccchhhHHH
Confidence 6789999888877663 344 3468899996332211 1246799999999999888
Q ss_pred HHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eE
Q 026418 77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RY 150 (239)
Q Consensus 77 ~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y 150 (239)
++.+ .|+++-.+-|+.+--+..... .........+.+..+ ..-+...+|+|+++++++... -.-| ++
T Consensus 172 lA~e~~~~gIrVN~I~PG~v~T~~~~~~-~~~~~~~~~~~~~~p------l~R~~~pediA~~v~fL~S~~s~~itG~~i 244 (261)
T d1geea_ 172 LALEYAPKGIRVNNIGPGAINTPINAEK-FADPEQRADVESMIP------MGYIGEPEEIAAVAAWLASSEASYVTGITL 244 (261)
T ss_dssp HHHHHGGGTCEEEEEEECSBCSGGGHHH-HHSHHHHHHHHTTCT------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred HHHHhhhhCcEEEEEeeCcCcCHhHhhh-cCCHHHHHHHHhcCC------CCCCCCHHHHHHHHHHHhCchhcCCcCCeE
Confidence 8765 479999999999864421100 000112222222222 123567899999999988532 2234 55
Q ss_pred EEe
Q 026418 151 LCA 153 (239)
Q Consensus 151 ~~~ 153 (239)
.+.
T Consensus 245 ~vD 247 (261)
T d1geea_ 245 FAD 247 (261)
T ss_dssp EES
T ss_pred EEC
Confidence 554
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=97.16 E-value=0.00094 Score=49.29 Aligned_cols=113 Identities=13% Similarity=0.080 Sum_probs=72.3
Q ss_pred chhHhHHHHHHHHHHHh----cCC-CEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKV-RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v-~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++..+.+++.. .+. .++|++||+++..+. .....|+.+|...+.+.+.
T Consensus 110 ~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~---------------------~~~~~Y~asKaal~~lt~~ 168 (251)
T d1zk4a1 110 LAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGD---------------------PSLGAYNASKGAVRIMSKS 168 (251)
T ss_dssp HHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCC---------------------TTCHHHHHHHHHHHHHHHH
T ss_pred ccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccC---------------------CCchhHHHHHHHHhcchHH
Confidence 67899999998888743 343 478999997433211 1246799999999988887
Q ss_pred HHHH-----cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 77 EAVA-----RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 77 ~~~~-----~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
++.+ .|+++-.+.||.+-.+....... .......... .+ ..-+...+|+|.++.+++..
T Consensus 169 lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~--~~~~~~~~~~----~p--l~R~~~pedvA~~v~fL~S~ 232 (251)
T d1zk4a1 169 AALDCALKDYDVRVNTVHPGYIKTPLVDDLPG--AEEAMSQRTK----TP--MGHIGEPNDIAYICVYLASN 232 (251)
T ss_dssp HHHHHHHTTCSEEEEEEEECCBCCHHHHTSTT--HHHHHTSTTT----CT--TSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHhcCCCcEEEEEEeCCCCCChhHHhcCC--HHHHHHHHhC----CC--CCCCcCHHHHHHHHHHHhCc
Confidence 7643 47999999999985432111100 1111111111 11 12367899999999998853
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=97.08 E-value=0.0019 Score=47.71 Aligned_cols=114 Identities=12% Similarity=0.001 Sum_probs=72.8
Q ss_pred chhHhHHHHHHHHHHHhcC--CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~--v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++..+.+++...- -.++|++||.++..+. .....|+.+|...+.+.+.++.
T Consensus 118 ~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~---------------------~~~~~Y~asKaal~~ltr~lA~ 176 (256)
T d1ulua_ 118 LEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVV---------------------PKYNVMAIAKAALEASVRYLAY 176 (256)
T ss_dssp HHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBC---------------------TTCHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCC---------------------CCchHHHHHHHHHHHHHHHHHH
Confidence 5789999999998876431 2579999996332211 1246799999999999988877
Q ss_pred H---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 80 A---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 80 ~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
+ .|+++-.+.|+.+.-+...... ........+.+..+. .-+...+|+|+++.+++..
T Consensus 177 ela~~gIrVN~I~PG~i~t~~~~~~~-~~~~~~~~~~~~~pl------~R~~~pedvA~~v~fL~S~ 236 (256)
T d1ulua_ 177 ELGPKGVRVNAISAGPVRTVAARSIP-GFTKMYDRVAQTAPL------RRNITQEEVGNLGLFLLSP 236 (256)
T ss_dssp HHGGGTCEEEEEEECCC-----------CHHHHHHHHHHSTT------SSCCCHHHHHHHHHHHHSG
T ss_pred HhcccCCEEeeeccceeeeccccchh-hhHHHHHHHHhcCCC------CCCcCHHHHHHHHHHHhCc
Confidence 5 4789999999988665432211 112233333333221 2255689999999998863
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.07 E-value=0.00078 Score=49.45 Aligned_cols=125 Identities=18% Similarity=0.137 Sum_probs=77.9
Q ss_pred chhHhHHHHHHHHHHHh-----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE-----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~-----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++..+.+++.+ .+-.++|++||. +..... .....|+.+|...+.+.+.
T Consensus 102 ~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~-~~~~~~--------------------~~~~~Y~asKaal~~lt~~ 160 (242)
T d1cyda_ 102 FSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSM-VAHVTF--------------------PNLITYSSTKGAMTMLTKA 160 (242)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCG-GGTSCC--------------------TTBHHHHHHHHHHHHHHHH
T ss_pred HHHHhccchHHHHHhchhhhhhcccCcccccchh-hccccC--------------------CccccccchHHHHHHHHHH
Confidence 67899999998886643 224689999996 322111 1246799999999999998
Q ss_pred HHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eE
Q 026418 77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RY 150 (239)
Q Consensus 77 ~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y 150 (239)
++.+ .|+++-.+-||.+-.+..... .........+....+ ..-+...+|+|+++.+++... -.-| ++
T Consensus 161 lA~e~~~~gIrvN~I~PG~i~T~~~~~~-~~~~~~~~~~~~~~p------l~R~~~peeva~~v~fL~S~~s~~itG~~i 233 (242)
T d1cyda_ 161 MAMELGPHKIRVNSVNPTVVLTDMGKKV-SADPEFARKLKERHP------LRKFAEVEDVVNSILFLLSDRSASTSGGGI 233 (242)
T ss_dssp HHHHHGGGTEEEEEEEECCBTTHHHHHH-TCCHHHHHHHHHHST------TSSCBCHHHHHHHHHHHHSGGGTTCCSSEE
T ss_pred HHHHhCccCeecccCCCCCccCHHHHhh-cCCHHHHHHHHhcCC------CCCCcCHHHHHHHHHHHhCchhcCcCCceE
Confidence 8775 478999999998854311000 000112222222221 123667899999999988532 2234 55
Q ss_pred EEec
Q 026418 151 LCAE 154 (239)
Q Consensus 151 ~~~~ 154 (239)
.+.|
T Consensus 234 ~vDG 237 (242)
T d1cyda_ 234 LVDA 237 (242)
T ss_dssp EEST
T ss_pred EeCc
Confidence 5543
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=97.03 E-value=0.004 Score=45.25 Aligned_cols=124 Identities=9% Similarity=0.035 Sum_probs=77.2
Q ss_pred chhHhHHHHHHHHHH----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..+.+++ ++.+-.++|++||. ...... .....|+.+|...+.+.+.+
T Consensus 94 ~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~-~~~~~~--------------------~~~~~Y~asKaal~~ltk~l 152 (234)
T d1o5ia_ 94 IDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSF-SVISPI--------------------ENLYTSNSARMALTGFLKTL 152 (234)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG-GGTSCC--------------------TTBHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhhhhhcccccccccccccccccccc-cccccc--------------------cccccchhHHHHHHHHHHHH
Confidence 578888887777766 34455689999995 432111 12567999999999888887
Q ss_pred HHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eEE
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYL 151 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y~ 151 (239)
+.+ .|+++-.+.||.+-.+...... .......+.+..+ ..-+...+|+|.++.+++... -.-| ++.
T Consensus 153 A~ela~~gIrVN~I~PG~v~T~~~~~~~--~~~~~~~~~~~~p------l~R~~~pediA~~v~fL~S~~s~~itG~~i~ 224 (234)
T d1o5ia_ 153 SFEVAPYGITVNCVAPGWTETERVKELL--SEEKKKQVESQIP------MRRMAKPEEIASVVAFLCSEKASYLTGQTIV 224 (234)
T ss_dssp HHHHGGGTEEEEEEEECSBCCTTHHHHS--CHHHHHHHHTTST------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHhcccCeEEeecccCccchhhhhhhc--CHHHHHHHHhcCC------CCCCcCHHHHHHHHHHHhChhhcCCcCcEEE
Confidence 765 3789999999988554311100 0112222222222 133667999999999988532 2234 555
Q ss_pred Eec
Q 026418 152 CAE 154 (239)
Q Consensus 152 ~~~ 154 (239)
+.|
T Consensus 225 vDG 227 (234)
T d1o5ia_ 225 VDG 227 (234)
T ss_dssp EST
T ss_pred ECc
Confidence 543
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=97.03 E-value=0.006 Score=44.98 Aligned_cols=127 Identities=20% Similarity=0.098 Sum_probs=76.9
Q ss_pred chhHhHHHHHHHHHHHhcC--CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~--v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.+...+++++.++= -.+.+.++|.++..... .....|+.+|...+.+.+.++.
T Consensus 112 ~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~~--------------------~~~~~Y~asK~al~~l~r~lA~ 171 (259)
T d1ja9a_ 112 FNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGI--------------------PNHALYAGSKAAVEGFCRAFAV 171 (259)
T ss_dssp HHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSC--------------------CSCHHHHHHHHHHHHHHHHHHH
T ss_pred HhhccceeeeehhhhhhhhhcCCcccccccccccccCC--------------------CCchhHHHHHHHHHHHHHHHHH
Confidence 5789999988888886531 23565565533433111 1246799999999999988877
Q ss_pred H---cCccEEEEecCcccCCC---------CCCCCChhHHHH-HHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCCC-
Q 026418 80 A---RGVDLVVVNPVLVLGPL---------LQSTVNASIIHI-LKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS- 145 (239)
Q Consensus 80 ~---~~~~~~i~Rp~~v~G~~---------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~- 145 (239)
+ .|+++-.+.||.+--+. ...........+ ..+.+..+ ..-+...+|+|+++++++....
T Consensus 172 e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p------l~R~g~p~eVa~~v~fL~S~~a~ 245 (259)
T d1ja9a_ 172 DCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNP------LKRIGYPADIGRAVSALCQEESE 245 (259)
T ss_dssp HHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTST------TSSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCC------CCCCcCHHHHHHHHHHHhCchhc
Confidence 5 47999999999885321 000111111222 22233322 1336779999999999886432
Q ss_pred -CCc-eEEEec
Q 026418 146 -ASG-RYLCAE 154 (239)
Q Consensus 146 -~~~-~y~~~~ 154 (239)
.-| +..+.|
T Consensus 246 ~itG~~i~vDG 256 (259)
T d1ja9a_ 246 WINGQVIKLTG 256 (259)
T ss_dssp TCCSCEEEEST
T ss_pred CCcCceEEeCC
Confidence 234 555444
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.99 E-value=0.00017 Score=53.56 Aligned_cols=129 Identities=14% Similarity=0.066 Sum_probs=73.8
Q ss_pred chhHhHHHHHHHHHHHh----cC---CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AK---VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAA 74 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~---v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~ 74 (239)
+++|+.++.++..++.+ .+ -.++|++||.++..+. .....|+.+|...+.+.
T Consensus 102 ~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~---------------------~~~~~Y~asKaal~~lt 160 (254)
T d2gdza1 102 LQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV---------------------AQQPVYCASKHGIVGFT 160 (254)
T ss_dssp HHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC---------------------TTCHHHHHHHHHHHHHH
T ss_pred eeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCC---------------------CCccchHHHHHHHHHHH
Confidence 57888887777766643 22 2569999997443321 12467999999999887
Q ss_pred HH--HH---HHcCccEEEEecCcccCCCCCCCCC-----hhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 75 WE--EA---VARGVDLVVVNPVLVLGPLLQSTVN-----ASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 75 ~~--~~---~~~~~~~~i~Rp~~v~G~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
+. ++ ...|+++-.+.||.+--+....... ........+.+.. + ..-+...+|+|+++++++...
T Consensus 161 rs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~----p--~~r~~~pedvA~~v~fL~s~~ 234 (254)
T d2gdza1 161 RSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMI----K--YYGILDPPLIANGLITLIEDD 234 (254)
T ss_dssp HHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHH----H--HHCCBCHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcC----C--CCCCcCHHHHHHHHHHHHcCC
Confidence 64 22 2458999999999884321000000 0000000000000 0 012456789999999999765
Q ss_pred CCCc-eEEEe-cCCC
Q 026418 145 SASG-RYLCA-ESVL 157 (239)
Q Consensus 145 ~~~~-~y~~~-~~~~ 157 (239)
..-| +..+. |..+
T Consensus 235 ~itG~~i~VdGG~~~ 249 (254)
T d2gdza1 235 ALNGAIMKITTSKGI 249 (254)
T ss_dssp TCSSCEEEEETTTEE
T ss_pred CCCCCEEEECCCCee
Confidence 4445 55554 4433
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=96.96 E-value=0.002 Score=46.88 Aligned_cols=103 Identities=12% Similarity=0.055 Sum_probs=70.2
Q ss_pred chhHhHHHHHHHHHHHhcC--CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~--v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++..+.+++..+- -.++|++||.++..+. .....|+.+|...+.+.+.++.
T Consensus 100 ~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~---------------------~~~~~Y~asKaal~~l~~~la~ 158 (235)
T d1ooea_ 100 IKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPT---------------------PSMIGYGMAKAAVHHLTSSLAA 158 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC---------------------TTBHHHHHHHHHHHHHHHHHHS
T ss_pred hhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCc---------------------ccccchHHHHHHHHHHHHHHHH
Confidence 6789999998888886641 2589999997443321 1246799999999999999876
Q ss_pred Hc-----CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhc
Q 026418 80 AR-----GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYE 142 (239)
Q Consensus 80 ~~-----~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~ 142 (239)
+. ++++..+.|+.+--+ +........ ....++..+|+++.++..+.
T Consensus 159 e~~~~~~~i~v~~i~Pg~~~T~-----------~~~~~~~~~------~~~~~~~~~~va~~~~~~l~ 209 (235)
T d1ooea_ 159 KDSGLPDNSAVLTIMPVTLDTP-----------MNRKWMPNA------DHSSWTPLSFISEHLLKWTT 209 (235)
T ss_dssp TTSSCCTTCEEEEEEESCBCCH-----------HHHHHSTTC------CGGGCBCHHHHHHHHHHHHH
T ss_pred HhccCCCceEEEEEecCcCcCc-----------chhhhCcCC------ccccCCCHHHHHHHHHHHhc
Confidence 53 557777899887321 223332221 12346788999999875553
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.90 E-value=0.0023 Score=48.33 Aligned_cols=126 Identities=11% Similarity=0.008 Sum_probs=76.9
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..+.+++.+ .+-.++|++|+ +...+. .....|+.+|...+.+.+.+
T Consensus 122 ~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss-~~~~~~---------------------~~~~~Y~asKaal~~ltk~l 179 (297)
T d1yxma1 122 LETNLTGTFYMCKAVYSSWMKEHGGSIVNIIV-PTKAGF---------------------PLAVHSGAARAGVYNLTKSL 179 (297)
T ss_dssp HHHHTHHHHHHHHHHHHHTHHHHCEEEEEECC-CCTTCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred hcccccchhhHHHHHHHhhccccccccccccc-cccccc---------------------cccccchhHHHHHHHHHHHH
Confidence 67899999998888753 23456777766 332211 12467999999999999988
Q ss_pred HHHc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eEE
Q 026418 78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYL 151 (239)
Q Consensus 78 ~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y~ 151 (239)
+.+. |+++-.+.||.+..+.......... ....+......+ ..-+...+|+|.++++++... -.-| ++.
T Consensus 180 A~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~---~~~~~~~~~~~p--lgR~g~pedvA~~v~fL~Sd~s~~iTG~~i~ 254 (297)
T d1yxma1 180 ALEWACSGIRINCVAPGVIYSQTAVENYGSWG---QSFFEGSFQKIP--AKRIGVPEEVSSVVCFLLSPAASFITGQSVD 254 (297)
T ss_dssp HHHTGGGTEEEEEEEECSBCCTGGGTTSGGGG---GGGGTTGGGGST--TSSCBCTHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHhcccCceEEEeeeCcCcCcchhhhccccC---HHHHHHHHhcCC--CCCCcCHHHHHHHHHHHhCchhcCcCCcEEE
Confidence 8764 7899999999986543211111000 111111111111 123667899999999988532 2334 555
Q ss_pred Eec
Q 026418 152 CAE 154 (239)
Q Consensus 152 ~~~ 154 (239)
+.|
T Consensus 255 VDG 257 (297)
T d1yxma1 255 VDG 257 (297)
T ss_dssp EST
T ss_pred eCc
Confidence 553
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=96.89 E-value=0.0081 Score=44.04 Aligned_cols=124 Identities=14% Similarity=-0.009 Sum_probs=78.3
Q ss_pred chhHhHHHHHHHHHHHhcC--CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~--v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+.+|+.+...+.+++...- -..+|++||.++..+. .....|+.+|.+.+.+.+.+++
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~---------------------~~~~~Y~~sKaal~~ltr~lA~ 174 (258)
T d1qsga_ 116 HDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAI---------------------PNYNVMGLAKASLEANVRYMAN 174 (258)
T ss_dssp HHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC---------------------TTTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCC---------------------CCcHHHHHHHHHHHHHHHHHHH
Confidence 3567788888888776542 2568888885333221 1246799999999999998887
Q ss_pred Hc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eEEEe
Q 026418 80 AR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYLCA 153 (239)
Q Consensus 80 ~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y~~~ 153 (239)
.. |+++-.+.||.+..+..... ..............+. .-+...+|+|.++.+++... -..| ++.+.
T Consensus 175 el~~~gIrVN~I~PG~i~T~~~~~~-~~~~~~~~~~~~~~pl------~R~~~peeia~~v~fL~s~~s~~itG~~i~vD 247 (258)
T d1qsga_ 175 AMGPEGVRVNAISAGPIRTLAASGI-KDFRKMLAHCEAVTPI------RRTVTIEDVGNSAAFLCSDLSAGISGEVVHVD 247 (258)
T ss_dssp HHTTTTEEEEEEEECCCCCTTGGGS-TTHHHHHHHHHHHSTT------SSCCCHHHHHHHHHHHTSGGGTTCCSCEEEES
T ss_pred HhCccCceeeccccccccccccccc-chhhhHHHHHHhCCCC------CCCcCHHHHHHHHHHHhCchhcCccCceEEEC
Confidence 64 68999999999976542211 1111222233222221 22566899999999988542 2344 45554
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=96.83 E-value=0.0072 Score=44.93 Aligned_cols=129 Identities=12% Similarity=0.130 Sum_probs=77.1
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..+.+++.. .+-.+++++||.++..+. .....|+.+|...+.+.+.+
T Consensus 114 ~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~---------------------~~~~~Y~asKaal~~ltk~l 172 (274)
T d1xhla_ 114 FKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAH---------------------SGYPYYACAKAALDQYTRCT 172 (274)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCC---------------------TTSHHHHHHHHHHHHHHHHH
T ss_pred HhhcccccccccccccccccccccccccchhhhhccccC---------------------CCCceehhhhhHHHHHHHHH
Confidence 57899999888877743 344678887775222111 12457999999999998887
Q ss_pred HHH---cCccEEEEecCcccCCCCCCC--CChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC---CCCCc-
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQST--VNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET---PSASG- 148 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~---~~~~~- 148 (239)
+.+ .|+++-.+.||.+--+..... .......+...........|- .-+...+|+|+++++++.. .-.-|
T Consensus 173 A~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPl--gR~g~pediA~~v~fL~S~d~s~~itG~ 250 (274)
T d1xhla_ 173 AIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPV--GHCGKPEEIANIIVFLADRNLSSYIIGQ 250 (274)
T ss_dssp HHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT--SSCBCHHHHHHHHHHHHCHHHHTTCCSC
T ss_pred HHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCC--CCCcCHHHHHHHHHHHcCCccccCccCc
Confidence 765 489999999999854321100 001111222222221111121 2256789999999998852 22344
Q ss_pred eEEEe
Q 026418 149 RYLCA 153 (239)
Q Consensus 149 ~y~~~ 153 (239)
++.+.
T Consensus 251 ~i~vD 255 (274)
T d1xhla_ 251 SIVAD 255 (274)
T ss_dssp EEEES
T ss_pred EEEeC
Confidence 55554
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.83 E-value=0.00055 Score=50.38 Aligned_cols=104 Identities=15% Similarity=0.050 Sum_probs=69.9
Q ss_pred CchhHhHHHHHHHHHH----HhcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 1 MVEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 1 ~~~~Nv~~t~~ll~a~----~~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
++++|+.|+..+.+++ ++.+-.++|++||.++..+. .....|+.+|.+.+.+.+.
T Consensus 111 ~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~---------------------~~~~~Y~asKaal~~~~~~ 169 (244)
T d1yb1a_ 111 TFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSV---------------------PFLLAYCSSKFAAVGFHKT 169 (244)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCH---------------------HHHHHHHHHHHHHHHHHHH
T ss_pred hcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCC---------------------CCcHHHHHHHHHHHHHHHH
Confidence 3678999988888766 44556789999996332211 1245699999999999888
Q ss_pred HHHH------cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 77 EAVA------RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 77 ~~~~------~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
++.+ .|+.+..+.||.+--+.... ... .....+..+|+|+.++..+...
T Consensus 170 La~El~~~~~~gI~V~~i~PG~v~T~~~~~---------------~~~----~~~~~~~pe~va~~i~~~~~~~ 224 (244)
T d1yb1a_ 170 LTDELAALQITGVKTTCLCPNFVNTGFIKN---------------PST----SLGPTLEPEEVVNRLMHGILTE 224 (244)
T ss_dssp HHHHHHHTTCTTEEEEEEEETHHHHCSTTC---------------THH----HHCCCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHhhcCCCEEEEEEEcCCCCChhhhC---------------cCc----cccCCCCHHHHHHHHHHHHhcC
Confidence 8764 37999999999874332110 000 0112345789999998877654
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.82 E-value=0.0027 Score=46.93 Aligned_cols=115 Identities=17% Similarity=0.044 Sum_probs=72.7
Q ss_pred chhHhHHHHHHHHHHHhc----C--CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----K--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAW 75 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----~--v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~ 75 (239)
+++|+.++..+.+++.+. + -.++|++||.++..+. .....|+.+|...+.+.+
T Consensus 123 ~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~~---------------------~~~~~Y~asKaal~~lt~ 181 (259)
T d1oaaa_ 123 WALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPY---------------------KGWGLYCAGKAARDMLYQ 181 (259)
T ss_dssp HHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCC---------------------TTCHHHHHHHHHHHHHHH
T ss_pred HHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCCC---------------------ccchHHHHHHHHHHHHHH
Confidence 679999999999988654 1 2479999996443321 125679999999999999
Q ss_pred HHHHH-cCccEEEEecCcccCCCCCCC--CChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 76 EEAVA-RGVDLVVVNPVLVLGPLLQST--VNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 76 ~~~~~-~~~~~~i~Rp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
.++.+ .|+++..+.||.+-.+..... ..........+.... + ...+...+|+|++++.++..
T Consensus 182 ~la~e~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~----~--~~r~~~p~evA~~i~~ll~~ 246 (259)
T d1oaaa_ 182 VLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLK----S--DGALVDCGTSAQKLLGLLQK 246 (259)
T ss_dssp HHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHH----H--TTCSBCHHHHHHHHHHHHHH
T ss_pred HHHhCCCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcC----C--CCCCCCHHHHHHHHHHHhhh
Confidence 88765 478999999998854310000 000000111111100 1 11246789999999988864
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.78 E-value=0.0036 Score=45.50 Aligned_cols=105 Identities=10% Similarity=-0.005 Sum_probs=73.1
Q ss_pred chhHhHHHHHHHHHHHhc--CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~--~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++.++.+++.++ +-.++|++||.++..+. .....|+.||...+.+.+.++.
T Consensus 100 ~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~---------------------~~~~~Y~asKaal~~lt~~la~ 158 (236)
T d1dhra_ 100 WKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGT---------------------PGMIGYGMAKGAVHQLCQSLAG 158 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC---------------------TTBHHHHHHHHHHHHHHHHHTS
T ss_pred HHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCc---------------------cCCcccHHHHHHHHHHHHHHHH
Confidence 678999999988888653 13689999996332211 1246799999999999999876
Q ss_pred H-----cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 80 A-----RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 80 ~-----~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
+ .|+++..+.|+.+.-+ +........ ..-.++..+++++.+..++...
T Consensus 159 El~~~~~gI~vn~v~PG~v~T~-----------~~~~~~~~~------~~~~~~~pe~va~~~~~l~s~~ 211 (236)
T d1dhra_ 159 KNSGMPSGAAAIAVLPVTLDTP-----------MNRKSMPEA------DFSSWTPLEFLVETFHDWITGN 211 (236)
T ss_dssp TTSSCCTTCEEEEEEESCEECH-----------HHHHHSTTS------CGGGSEEHHHHHHHHHHHHTTT
T ss_pred HhccCCCcEEEEEEEeccCcCC-----------cchhhCccc------hhhcCCCHHHHHHHHHHHhCCC
Confidence 5 3689999999998532 112221111 1123677899999999988643
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.72 E-value=0.0033 Score=46.07 Aligned_cols=126 Identities=16% Similarity=0.125 Sum_probs=78.9
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..+.+++.+ .+-.++|++||..+.. .+ ......|+.+|...+.+++.+
T Consensus 102 ~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~---~~-----------------~~~~~~Y~~sKaal~~l~r~l 161 (245)
T d2ag5a1 102 MNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSV---KG-----------------VVNRCVYSTTKAAVIGLTKSV 161 (245)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTT---BC-----------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred HHHhhccchhHHHhhCcccccCCCceeeeeechhhcc---CC-----------------ccchhHHHHHHHHHHHHHHHH
Confidence 57899999998887753 3456899999852311 00 023567999999999999988
Q ss_pred HHH---cCccEEEEecCcccCCCCCC---CCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-
Q 026418 78 AVA---RGVDLVVVNPVLVLGPLLQS---TVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG- 148 (239)
Q Consensus 78 ~~~---~~~~~~i~Rp~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~- 148 (239)
+.+ .|+++-.+.||.+-.+.... ...........+....+ ..-+...+|+|+++.+++... -.-|
T Consensus 162 A~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~p------l~R~~~pedva~~v~fL~s~~s~~iTG~ 235 (245)
T d2ag5a1 162 AADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQK------TGRFATAEEIAMLCVYLASDESAYVTGN 235 (245)
T ss_dssp HHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCT------TSSCEEHHHHHHHHHHHHSGGGTTCCSC
T ss_pred HHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCC------CCCCcCHHHHHHHHHHHhChhhCCCcCc
Confidence 876 47899999999886542100 00000111222222222 233778899999999998633 2234
Q ss_pred eEEEe
Q 026418 149 RYLCA 153 (239)
Q Consensus 149 ~y~~~ 153 (239)
++.+.
T Consensus 236 ~i~VD 240 (245)
T d2ag5a1 236 PVIID 240 (245)
T ss_dssp EEEEC
T ss_pred eEEeC
Confidence 45544
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=96.64 E-value=0.0069 Score=45.08 Aligned_cols=114 Identities=17% Similarity=0.098 Sum_probs=69.1
Q ss_pred chhHhHHHHHHHHHHH----hcCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..+.+++. +.+ .++|++||.++..+. .....|+.+|...+.+.+.+
T Consensus 112 ~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~~~~---------------------~~~~~Y~asKaal~~ltr~l 169 (276)
T d1bdba_ 112 FHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFYPN---------------------GGGPLYTAAKHAIVGLVREL 169 (276)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSTT---------------------SSCHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhccCC---------------------CCCchHHHHHHHHHHHHHHH
Confidence 6789999888877763 334 578888885343321 12456999999999998888
Q ss_pred HHHc--CccEEEEecCcccCCCCCCCCC------hhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhc
Q 026418 78 AVAR--GVDLVVVNPVLVLGPLLQSTVN------ASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYE 142 (239)
Q Consensus 78 ~~~~--~~~~~i~Rp~~v~G~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~ 142 (239)
+.+. ++++-.+.||.+--+...+... .....+........+ ..-+...+|+|.++++++.
T Consensus 170 A~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-----lgR~g~peeva~~v~fL~S 237 (276)
T d1bdba_ 170 AFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLP-----IGRMPEVEEYTGAYVFFAT 237 (276)
T ss_dssp HHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCT-----TSSCCCGGGGSHHHHHHHC
T ss_pred HHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCC-----CCCCcCHHHHHHHHHHHcC
Confidence 7764 4788889999885432111000 000011122222111 1225568899999988764
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=96.62 E-value=0.013 Score=43.38 Aligned_cols=116 Identities=16% Similarity=0.025 Sum_probs=72.1
Q ss_pred chhHhHHHHHHHHHHHhcC--CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~--v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++..+.+++...= -.+.++++|..+..+.. .....|+.+|...+.+.+.++.
T Consensus 124 ~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~~~--------------------~~~~~Y~asKaal~~ltk~lA~ 183 (272)
T d1g0oa_ 124 FTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAV--------------------PKHAVYSGSKGAIETFARCMAI 183 (272)
T ss_dssp HHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSC--------------------SSCHHHHHHHHHHHHHHHHHHH
T ss_pred hhhccceeeeeccccccccccccccccccccccccccc--------------------cchhhHHHHHHHHHHHHHHHHH
Confidence 5789999999999887532 24677777742222111 2246799999999999988877
Q ss_pred H---cCccEEEEecCcccCCC--------CCCCCChhH-HHHH-HHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 80 A---RGVDLVVVNPVLVLGPL--------LQSTVNASI-IHIL-KYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 80 ~---~~~~~~i~Rp~~v~G~~--------~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
+ .|+++-.+.||.+-.+. ......... .... ......+ ..-+...+|+|.++.+++..
T Consensus 184 e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P------lgR~~~peevA~~v~fL~s~ 254 (272)
T d1g0oa_ 184 DMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSP------LRRVGLPIDIARVVCFLASN 254 (272)
T ss_dssp HHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCT------TCSCBCHHHHHHHHHHHHSG
T ss_pred HhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCC------CCCCcCHHHHHHHHHHHhCc
Confidence 5 48999999999985321 000000000 1111 1111111 12367789999999999864
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=96.52 E-value=0.0054 Score=44.89 Aligned_cols=76 Identities=14% Similarity=0.040 Sum_probs=53.7
Q ss_pred chhHhHHHHHHHHHHHhc---------------CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA---------------KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYG 66 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~---------------~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~s 66 (239)
+++|+.|+..+.+++... +-.++|.+||..+..+... ......|+.|
T Consensus 112 ~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~~~~------------------~~~~~~Y~aS 173 (248)
T d1snya_ 112 LQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNT------------------DGGMYAYRTS 173 (248)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTTCC------------------SCCCHHHHHH
T ss_pred HHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccCCCC------------------CCChHHHHHH
Confidence 678999999888876431 2367999999633221110 0124579999
Q ss_pred HHHHHHHHHHHHHH---cCccEEEEecCcccC
Q 026418 67 KAVAEKAAWEEAVA---RGVDLVVVNPVLVLG 95 (239)
Q Consensus 67 K~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G 95 (239)
|.+...+.+.++.+ .|+++..+.||.+--
T Consensus 174 Kaal~~lt~~la~e~~~~gI~vn~v~PG~v~T 205 (248)
T d1snya_ 174 KSALNAATKSLSVDLYPQRIMCVSLHPGWVKT 205 (248)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEECCCSBCS
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEEcCCCcccC
Confidence 99999888887654 479999999998843
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=96.51 E-value=0.014 Score=43.18 Aligned_cols=119 Identities=13% Similarity=0.100 Sum_probs=68.6
Q ss_pred chhHhHHHHHHHHHHHhc---CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA---KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA 78 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~---~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~ 78 (239)
+++|+.++..+.+++... +-..+|.++|..+..... .....|+.+|...+.+.+.++
T Consensus 117 ~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~~--------------------~~~~~Y~asKaal~~ltk~lA 176 (272)
T d1xkqa_ 117 LKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQ--------------------PDFLYYAIAKAALDQYTRSTA 176 (272)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCC--------------------CSSHHHHHHHHHHHHHHHHHH
T ss_pred HHhhhhHHHHHHHhhcccccccCCccccccchhccccCC--------------------CCcchhhhHHHHHHHHHHHHH
Confidence 578999998888876442 123455555521211100 124669999999999988887
Q ss_pred HH---cCccEEEEecCcccCCCCCCCC--ChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhc
Q 026418 79 VA---RGVDLVVVNPVLVLGPLLQSTV--NASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYE 142 (239)
Q Consensus 79 ~~---~~~~~~i~Rp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~ 142 (239)
.+ .|+++-.+-||.+--+...... ..................|- .-+...+|+|+++++++.
T Consensus 177 ~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl--gR~g~pediA~~v~fL~S 243 (272)
T d1xkqa_ 177 IDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPI--GAAGKPEHIANIILFLAD 243 (272)
T ss_dssp HHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT--SSCBCHHHHHHHHHHHHC
T ss_pred HHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCC--CCCcCHHHHHHHHHHHhC
Confidence 65 4899999999988543211000 00111111111111111111 236678999999999885
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=96.43 E-value=0.0048 Score=45.66 Aligned_cols=115 Identities=13% Similarity=0.104 Sum_probs=68.2
Q ss_pred chhHhHHHHHHHHHHHhc---CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA---KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA 78 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~---~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~ 78 (239)
+++|+.++..+.+++.+. +-..+|.++|..+..... .....|+.+|...+.+.+.++
T Consensus 117 ~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~~--------------------~~~~~Y~asKaal~~lt~~lA 176 (264)
T d1spxa_ 117 LNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHAT--------------------PDFPYYSIAKAAIDQYTRNTA 176 (264)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCC--------------------TTSHHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHhhhCCccccccCcceeeeeeccccccC--------------------CCchhhhhhhhhHHHHHHHHH
Confidence 578999988888777542 124566666632311100 124569999999999988887
Q ss_pred HH---cCccEEEEecCcccCCCCCCCC------ChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhc
Q 026418 79 VA---RGVDLVVVNPVLVLGPLLQSTV------NASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYE 142 (239)
Q Consensus 79 ~~---~~~~~~i~Rp~~v~G~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~ 142 (239)
.+ .|+++-.+.||.+--+...... ......+..+.+..+ ..-+...+|+|+++++++.
T Consensus 177 ~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~P------l~R~g~pedvA~~v~fL~S 243 (264)
T d1spxa_ 177 IDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVP------AGVMGQPQDIAEVIAFLAD 243 (264)
T ss_dssp HHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCT------TSSCBCHHHHHHHHHHHHC
T ss_pred HHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCC------CCCCcCHHHHHHHHHHHhC
Confidence 65 4899999999988544211100 000111112222111 1235568999999999885
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=96.39 E-value=0.0048 Score=45.02 Aligned_cols=111 Identities=21% Similarity=0.128 Sum_probs=74.5
Q ss_pred chhHhHHHHHHHHHHHhcC--CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~--v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++..+.+++...- -..++.+||. +.... .....|+.+|...|.+.+.+++
T Consensus 107 ~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~-a~~~~---------------------~~~~~Y~~sK~al~~lt~~lA~ 164 (241)
T d2a4ka1 107 LRVNLTGSFLVARKAGEVLEEGGSLVLTGSV-AGLGA---------------------FGLAHYAAGKLGVVGLARTLAL 164 (241)
T ss_dssp HHHHHHHHHHHHHHHHHHCCTTCEEEEECCC-TTCCH---------------------HHHHHHHHCSSHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccceeecccc-ccccc---------------------cCccccchhhHHHHHHHHHHHH
Confidence 6789999999999886643 3445555553 32210 1135699999999999999987
Q ss_pred Hc---CccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 80 AR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 80 ~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
+. |+++-.+.||.+-.+... ...........+..+. .-+...+|+|+++.+++..
T Consensus 165 el~~~gIrvN~I~PG~v~T~~~~---~~~~~~~~~~~~~~p~------~r~~~p~dva~~v~fL~S~ 222 (241)
T d2a4ka1 165 ELARKGVRVNVLLPGLIQTPMTA---GLPPWAWEQEVGASPL------GRAGRPEEVAQAALFLLSE 222 (241)
T ss_dssp HHTTTTCEEEEEEECSBCCGGGT---TSCHHHHHHHHHTSTT------CSCBCHHHHHHHHHHHHSG
T ss_pred HHhHhCCEEeeeccCcCCCHHHH---hhhHhHHHHHHhCCCC------CCCcCHHHHHHHHHHHhcc
Confidence 74 689999999998544221 1122344444444331 2356789999999998863
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.35 E-value=0.0047 Score=45.83 Aligned_cols=105 Identities=15% Similarity=0.005 Sum_probs=68.3
Q ss_pred chhHhHHHHHHHHHHHhc---CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA---KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA 78 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~---~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~ 78 (239)
+++|+.++..+.+++... +-.++|++||.++..+. .....|+.||...+.+.+.++
T Consensus 120 ~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~~---------------------p~~~~Y~asKaal~~~~~~La 178 (269)
T d1xu9a_ 120 MEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAY---------------------PMVAAYSASKFALDGFFSSIR 178 (269)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCC---------------------TTCHHHHHHHHHHHHHHHHHH
T ss_pred eeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcCCC---------------------CCchHHHHHHHHHHHHHHHHH
Confidence 578888888877776421 12589999996433321 125679999999999888887
Q ss_pred HH-----cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC
Q 026418 79 VA-----RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 79 ~~-----~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
.+ .++++..+.||.+-- .+......+.. .......+++|+.++..+...
T Consensus 179 ~El~~~~~~I~V~~v~PG~v~T-----------~~~~~~~~~~~------~~~~~~~e~~a~~i~~~~~~~ 232 (269)
T d1xu9a_ 179 KEYSVSRVNVSITLCVLGLIDT-----------ETAMKAVSGIV------HMQAAPKEECALEIIKGGALR 232 (269)
T ss_dssp HHHHHHTCCCEEEEEEECCBCC-----------HHHHHHSCGGG------GGGCBCHHHHHHHHHHHHHTT
T ss_pred HHhhhcCCCEEEEEEecCcCCC-----------cHHHHhccCCc------cccCCCHHHHHHHHHHHhhcC
Confidence 64 357888899998832 12223322221 122345788998888776544
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.35 E-value=0.013 Score=43.05 Aligned_cols=113 Identities=16% Similarity=0.141 Sum_probs=69.1
Q ss_pred chhHhHHHHHHHHHH----HhcC--CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAA----AEAK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAW 75 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~----~~~~--v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~ 75 (239)
+++|+.++..+.+++ ++.+ -.++|++||+++.-+.+. .....|+.+|...+.+.+
T Consensus 117 ~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~-------------------~~~~~Y~~sKaal~~ltr 177 (257)
T d1xg5a_ 117 FNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPL-------------------SVTHFYSATKYAVTALTE 177 (257)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSC-------------------GGGHHHHHHHHHHHHHHH
T ss_pred hhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCC-------------------cccHHHHHHHHHHHhCHH
Confidence 578888888876665 3333 368999999633211110 124569999999999998
Q ss_pred HHHHH-----cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCcc--CCCCCCceehHHHHHHHHHhhcCC
Q 026418 76 EEAVA-----RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY--ANSVQAYVHVRDVALAHILVYETP 144 (239)
Q Consensus 76 ~~~~~-----~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~D~a~~~~~~~~~~ 144 (239)
.++.+ .++++..+-|+.+-.+. ...+.....-.. ......+...+|+|+++++++..+
T Consensus 178 ~la~el~~~~~~I~vn~i~PG~i~t~~-----------~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~fL~s~~ 242 (257)
T d1xg5a_ 178 GLRQELREAQTHIRATCISPGVVETQF-----------AFKLHDKDPEKAAATYEQMKCLKPEDVAEAVIYVLSTP 242 (257)
T ss_dssp HHHHHHHHTTCCCEEEEEEESCBCSSH-----------HHHHTTTCHHHHHHHHC---CBCHHHHHHHHHHHHHSC
T ss_pred HHHHHHHhCCCCEEEEEEeCCCCCChh-----------hhhcChhhHHHHHhcCCCCCCcCHHHHHHHHHHHhCCh
Confidence 88753 47888899998774321 011111100000 001133677999999999988654
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=95.99 E-value=0.012 Score=43.22 Aligned_cols=127 Identities=9% Similarity=0.035 Sum_probs=75.0
Q ss_pred chhHhHHHHHHHHHHHh----cCCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE 77 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 77 (239)
+++|+.++..+.+++.+ .+ .++|++||.++..+. .....|+.+|...+.+.+.+
T Consensus 108 ~~vNl~~~~~~~~~~~~~m~~~~-G~Iv~isS~~~~~~~---------------------~~~~~Y~asKaal~~lt~~l 165 (253)
T d1hxha_ 108 LKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPI---------------------EQYAGYSASKAAVSALTRAA 165 (253)
T ss_dssp HHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCC---------------------TTBHHHHHHHHHHHHHHHHH
T ss_pred HHHhhhHHHHHHHHHHHHHHhcC-CceecccchhhhcCc---------------------cccccccchhHHHHHHHHHH
Confidence 67899888888777643 34 789999997443321 12467999999999888877
Q ss_pred HHH-----cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-e
Q 026418 78 AVA-----RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-R 149 (239)
Q Consensus 78 ~~~-----~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~ 149 (239)
+.+ +++++-.+-||.+-.+........ ..............+ ...+...+|+|+++++++... -.-| +
T Consensus 166 A~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~--~~~~~~~~~~~~~~~--~gr~~~pedvA~~v~fL~S~~s~~itG~~ 241 (253)
T d1hxha_ 166 ALSCRKQGYAIRVNSIHPDGIYTPMMQASLPK--GVSKEMVLHDPKLNR--AGRAYMPERIAQLVLFLASDESSVMSGSE 241 (253)
T ss_dssp HHHHHHHTCCEEEEEEEESEECCHHHHHHSCT--TCCHHHHBCBTTTBT--TCCEECHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred HHHHhhcCCCEEEEEEeECCCcCHhHHhhCcc--hhhHHHHHhCccccc--cCCCCCHHHHHHHHHHHhChhhCCCcCcE
Confidence 654 247888899998853310000000 000111111111101 123677899999999988532 2234 5
Q ss_pred EEEec
Q 026418 150 YLCAE 154 (239)
Q Consensus 150 y~~~~ 154 (239)
..+.|
T Consensus 242 i~VDG 246 (253)
T d1hxha_ 242 LHADN 246 (253)
T ss_dssp EEESS
T ss_pred EEECc
Confidence 55543
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=95.97 E-value=0.059 Score=39.37 Aligned_cols=130 Identities=17% Similarity=0.156 Sum_probs=77.3
Q ss_pred chhHhHHHHHHHHHHHh----c-CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----A-KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~-~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+++|+.++..+.+++.+ . +-..++..||. ......... +. . ......|+.+|...+.+.+.
T Consensus 115 ~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~-~~~~~~~~~----~~-~--------~~~~~~Y~asKaal~~lt~~ 180 (260)
T d1h5qa_ 115 YDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSM-SSQIINQSS----LN-G--------SLTQVFYNSSKAACSNLVKG 180 (260)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCG-GGTSCCEEE----TT-E--------ECSCHHHHHHHHHHHHHHHH
T ss_pred ccccccchhhhhhhhcccccccccceEEEEeecc-ccccccccc----cc-c--------CccccchhhhhhhHHHHHHH
Confidence 57899998888776533 2 34556666663 433211100 00 0 12346799999999999888
Q ss_pred HHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eE
Q 026418 77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RY 150 (239)
Q Consensus 77 ~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y 150 (239)
++.+ .|+++-.+.||.+--+.... ........+....+. .-+...+|+|.++++++... -.-| ++
T Consensus 181 lA~el~~~gIrvN~I~PG~i~T~~~~~---~~~~~~~~~~~~~pl------~R~g~pedvA~~v~fL~S~~s~~itG~~i 251 (260)
T d1h5qa_ 181 LAAEWASAGIRVNALSPGYVNTDQTAH---MDKKIRDHQASNIPL------NRFAQPEEMTGQAILLLSDHATYMTGGEY 251 (260)
T ss_dssp HHHHHGGGTEEEEEEEECSBCCGGGGG---SCHHHHHHHHHTCTT------SSCBCGGGGHHHHHHHHSGGGTTCCSCEE
T ss_pred HHHHhchhCeEEeecCCCcccCcchhc---cCHHHHHHHHhcCCC------CCCcCHHHHHHHHHHHhcchhCCCcCceE
Confidence 8765 47999999999985443211 112333334333321 22566899999999988532 2234 45
Q ss_pred EEec
Q 026418 151 LCAE 154 (239)
Q Consensus 151 ~~~~ 154 (239)
.+.|
T Consensus 252 ~VDG 255 (260)
T d1h5qa_ 252 FIDG 255 (260)
T ss_dssp EECT
T ss_pred EECC
Confidence 5543
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=95.95 E-value=0.09 Score=39.02 Aligned_cols=125 Identities=14% Similarity=-0.003 Sum_probs=72.7
Q ss_pred chhHhHHHHHHHHHHH----hc-CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAA----EA-KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE 76 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~----~~-~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 76 (239)
+.+|..+...+...+. .. +...++.+||.++..+. .....|+.+|...+.+.+.
T Consensus 131 ~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~---------------------~~~~~YsasKaal~~ltk~ 189 (294)
T d1w6ua_ 131 TDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGS---------------------GFVVPSASAKAGVEAMSKS 189 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCC---------------------TTCHHHHHHHHHHHHHHHH
T ss_pred eeeecccchhhhhhhhcccccccccccccccccchhhhcc---------------------cccchHHHHHHHHHHHHHH
Confidence 3456666666554432 22 34567777775332211 1246699999999999998
Q ss_pred HHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CCCc-eE
Q 026418 77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RY 150 (239)
Q Consensus 77 ~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~y 150 (239)
++.+ .|+++-.+.||.+-.+.................+..+. .-+...+|+|.++.+++... -.-| +.
T Consensus 190 lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl------~R~~~pediA~~v~fL~sd~s~~itG~~i 263 (294)
T d1w6ua_ 190 LAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPC------GRLGTVEELANLAAFLCSDYASWINGAVI 263 (294)
T ss_dssp HHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTT------SSCBCHHHHHHHHHHHTSGGGTTCCSCEE
T ss_pred HHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCC------CCCCCHHHHHHHHHHHhCchhcCCCCcEE
Confidence 8765 47899999999996654221111111233333333321 23556899999999988532 2344 55
Q ss_pred EEe
Q 026418 151 LCA 153 (239)
Q Consensus 151 ~~~ 153 (239)
.+.
T Consensus 264 ~vD 266 (294)
T d1w6ua_ 264 KFD 266 (294)
T ss_dssp EES
T ss_pred EEC
Confidence 544
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=95.78 E-value=0.091 Score=38.60 Aligned_cols=121 Identities=13% Similarity=0.004 Sum_probs=74.7
Q ss_pred chhHhHHHHHHHHHHHhc----------CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEA----------KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAE 71 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~----------~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E 71 (239)
+.+|+.++..+.+++.+. +...+|+++|. ...... .....|+.+|...+
T Consensus 140 ~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~s~-~~~~~~--------------------~~~~~Y~asKaal~ 198 (284)
T d1e7wa_ 140 FGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDA-MTNQPL--------------------LGYTIYTMAKGALE 198 (284)
T ss_dssp HHHHTHHHHHHHHHHHHHHHTSCGGGSCSCEEEEEECCT-TTTSCC--------------------TTCHHHHHHHHHHH
T ss_pred HhhheeeeeeeeccccchhhhhHHHhcCCCCcccccccc-cccCCc--------------------cceeeeccccccch
Confidence 467888888888876432 23467777774 322110 12467999999999
Q ss_pred HHHHHHHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcCC--CC
Q 026418 72 KAAWEEAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SA 146 (239)
Q Consensus 72 ~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~ 146 (239)
.+.+.++.+ .|+++-.+-||.+-... ..............++ . .-+...+|+|+++++++... -.
T Consensus 199 ~lt~~lA~el~~~gIrvN~I~PG~t~~~~-----~~~~~~~~~~~~~~pl-~----~R~~~peeiA~~v~fL~S~~s~~i 268 (284)
T d1e7wa_ 199 GLTRSAALELAPLQIRVNGVGPGLSVLVD-----DMPPAVWEGHRSKVPL-Y----QRDSSAAEVSDVVIFLCSSKAKYI 268 (284)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEESSBCCGG-----GSCHHHHHHHHTTCTT-T----TSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred hhhHHHHHHhCCccccccccccccccccc-----cCCHHHHHHHHhcCCC-C----CCCCCHHHHHHHHHHHhCchhcCc
Confidence 999988775 47889999998642211 1112344444444332 1 22456899999999988533 23
Q ss_pred Cc-eEEEe
Q 026418 147 SG-RYLCA 153 (239)
Q Consensus 147 ~~-~y~~~ 153 (239)
-| ++.+.
T Consensus 269 tG~~i~VD 276 (284)
T d1e7wa_ 269 TGTCVKVD 276 (284)
T ss_dssp CSCEEEES
T ss_pred cCCeEEEC
Confidence 34 45544
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=95.33 E-value=0.26 Score=36.31 Aligned_cols=115 Identities=10% Similarity=-0.010 Sum_probs=72.2
Q ss_pred chhHhHHHHHHHHHHHhcCC--CEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAKV--RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~v--~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.+...+.+++..... ...+.+++.+...... .....|+.+|...+.+.+.++.
T Consensus 149 ~~vn~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--------------------~~~~~y~~aKaa~~~l~~~~a~ 208 (297)
T d1d7oa_ 149 ISASSYSFVSLLSHFLPIMNPGGASISLTYIASERIIP--------------------GYGGGMSSAKAALESDTRVLAF 208 (297)
T ss_dssp HHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSCCT--------------------TCTTTHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhhhhhhhHHHHHhhcCCcceeeeehhhccccc--------------------ccccceecccccccccccccch
Confidence 57899999999998876531 2345555532221111 1245699999888877665443
Q ss_pred ----HcCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 80 ----ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 80 ----~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
..|+++-.+.||.+..+..... ...........+..+. ..+...+|+|.++++++..
T Consensus 209 e~~~~~gIrvN~I~PG~i~T~~~~~~-~~~~~~~~~~~~~~Pl------gR~~~peevA~~v~fL~S~ 269 (297)
T d1d7oa_ 209 EAGRKQNIRVNTISAGPLGSRAAKAI-GFIDTMIEYSYNNAPI------QKTLTADEVGNAAAFLVSP 269 (297)
T ss_dssp HHHHHHCCEEEEEEECCCBCCCSSCC-SHHHHHHHHHHHHSSS------CCCBCHHHHHHHHHHHTSG
T ss_pred hccccceEEecccccccccchhhhhc-cCCHHHHHHHHhCCCC------CCCCCHHHHHHHHHHHhCc
Confidence 3589999999999976654321 2222333333333321 2356789999999999853
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.92 E-value=0.023 Score=42.05 Aligned_cols=93 Identities=20% Similarity=0.055 Sum_probs=56.3
Q ss_pred chhHhHHHHHHHHHHHhc--CCCEEEEccchhhhccCCCCCCCc-------cccCC-------------CCCChhhcccC
Q 026418 2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDD-------VVDES-------------CWSDLEFCKNT 59 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~--~v~~~i~~Ss~~~vy~~~~~~~~~-------~~~E~-------------~~~~~~~~~~~ 59 (239)
+++|+.|+..+.+++... .-.++|++||.+++.+.....++. ...+. ..........+
T Consensus 109 ~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (275)
T d1wmaa1 109 MKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWP 188 (275)
T ss_dssp HHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhhhhhcccccchhhhccccccchhcccccccccCCCc
Confidence 678999999999998653 125899999975554332211000 00000 00000000234
Q ss_pred CchHHHHHHHHHHHHHHHHHH-------cCccEEEEecCccc
Q 026418 60 KNWYCYGKAVAEKAAWEEAVA-------RGVDLVVVNPVLVL 94 (239)
Q Consensus 60 ~~~Y~~sK~~~E~~~~~~~~~-------~~~~~~i~Rp~~v~ 94 (239)
...|+.||.....+.+.++++ .++.+..+.||.|-
T Consensus 189 ~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~ 230 (275)
T d1wmaa1 189 SSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVR 230 (275)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeccccc
Confidence 567999999988776665443 37899999999884
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=94.81 E-value=0.11 Score=39.22 Aligned_cols=72 Identities=6% Similarity=-0.076 Sum_probs=51.9
Q ss_pred chhHhHHHHHHHHHHHhcC--CCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHHHHHHHHHHHHHHH
Q 026418 2 VEPAVIGTKNVIVAAAEAK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV 79 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~~~--v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 79 (239)
+++|+.++..+.+++.+.= -.++|.+||.++..+. + .....|+.+|...+.+.+.++.
T Consensus 143 ~~vn~~~~~~~~k~~~~~m~~~GsIv~iss~~~~~~~-p-------------------~y~~~y~asKaal~~ltr~lA~ 202 (329)
T d1uh5a_ 143 LSKSSYSLISLCKYFVNIMKPQSSIISLTYHASQKVV-P-------------------GYGGGMSSAKAALESDTRVLAY 202 (329)
T ss_dssp HHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSCC-T-------------------TCTTTHHHHHHHHHHHHHHHHH
T ss_pred cccchhHHHHHHHHHHhhcccccccccceeehhcccc-c-------------------ccchhhhhhhccccccchhhHH
Confidence 5788889888888887641 2578888885322111 0 1135699999999988888765
Q ss_pred H----cCccEEEEecCcc
Q 026418 80 A----RGVDLVVVNPVLV 93 (239)
Q Consensus 80 ~----~~~~~~i~Rp~~v 93 (239)
+ +|+++-.+.||.+
T Consensus 203 Ela~~~gIRVNaI~PG~i 220 (329)
T d1uh5a_ 203 HLGRNYNIRINTISAGPL 220 (329)
T ss_dssp HHHHHHCCEEEEEEECCC
T ss_pred HHhcccCcEEEEEecCcc
Confidence 4 4899999999976
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=94.59 E-value=0.085 Score=38.19 Aligned_cols=118 Identities=19% Similarity=0.101 Sum_probs=68.2
Q ss_pred chhHhHHHHHHHHHHHh----c-----------CCCEEEEccchhhhccCCCCCCCccccCCCCCChhhcccCCchHHHH
Q 026418 2 VEPAVIGTKNVIVAAAE----A-----------KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYG 66 (239)
Q Consensus 2 ~~~Nv~~t~~ll~a~~~----~-----------~v~~~i~~Ss~~~vy~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~s 66 (239)
+++|+.|+..+.+++.. . ...+++.+|+. ..+-... ..... ..+...|+.|
T Consensus 110 ~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~-~~~~~~~------~~~~~-------~~~~~aY~aS 175 (250)
T d1yo6a1 110 LDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSG-LGSITDN------TSGSA-------QFPVLAYRMS 175 (250)
T ss_dssp HHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCG-GGCSTTC------CSTTS-------SSCBHHHHHH
T ss_pred HHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccc-cccccCC------ccccc-------chhHHHHHHH
Confidence 67899999988877642 1 12467777774 3221111 01100 1235569999
Q ss_pred HHHHHHHHHHHHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHHHHhhcC
Q 026418 67 KAVAEKAAWEEAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET 143 (239)
Q Consensus 67 K~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 143 (239)
|.+...+.+.++.+ .|+++..+.||.|--+- . +. ...+..++.++.++..+..
T Consensus 176 Kaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m-----~-----------~~--------~~~~~~e~~a~~~~~~~~~ 231 (250)
T d1yo6a1 176 KAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNL-----G-----------GK--------NAALTVEQSTAELISSFNK 231 (250)
T ss_dssp HHHHHHHHHHHHHHTGGGTCEEEEEECCCC-------------------------------------HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCC-----C-----------CC--------CCCCCHHHHHHHHHHHHhc
Confidence 99999999888765 47999999999883210 0 00 1123467888888888865
Q ss_pred CC--CCceEEE-ecCCC
Q 026418 144 PS--ASGRYLC-AESVL 157 (239)
Q Consensus 144 ~~--~~~~y~~-~~~~~ 157 (239)
.. ..|.|.. .+.++
T Consensus 232 ~~~~~sG~f~~~~g~p~ 248 (250)
T d1yo6a1 232 LDNSHNGRFFMRNLKPY 248 (250)
T ss_dssp CCGGGTTCEEETTEEEC
T ss_pred CCCCCCeEEECCCCeeC
Confidence 43 2345533 24443
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=94.06 E-value=0.58 Score=33.59 Aligned_cols=84 Identities=17% Similarity=0.090 Sum_probs=56.2
Q ss_pred CchHHHHHHHHHHHHHHHHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHH
Q 026418 60 KNWYCYGKAVAEKAAWEEAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALA 136 (239)
Q Consensus 60 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~ 136 (239)
...|+.+|...+.+.+.++.. .|+++-.+.||.+.-+... .......+.+..+. + +-+...+|+|.+
T Consensus 169 ~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~-----~~~~~~~~~~~~pl--~---r~~~~peeva~~ 238 (266)
T d1mxha_ 169 FCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAM-----PQETQEEYRRKVPL--G---QSEASAAQIADA 238 (266)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSS-----CHHHHHHHHTTCTT--T---SCCBCHHHHHHH
T ss_pred hhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccC-----CHHHHHHHHhcCCC--C---CCCCCHHHHHHH
Confidence 577999999999999888775 4799999999988644321 12333444443321 1 224568999999
Q ss_pred HHHhhcCC--CCCc-eEEEe
Q 026418 137 HILVYETP--SASG-RYLCA 153 (239)
Q Consensus 137 ~~~~~~~~--~~~~-~y~~~ 153 (239)
+++++... -..| ++.+.
T Consensus 239 v~fL~s~~s~~itG~~i~vD 258 (266)
T d1mxha_ 239 IAFLVSKDAGYITGTTLKVD 258 (266)
T ss_dssp HHHHHSGGGTTCCSCEEEES
T ss_pred HHHHhCchhCCccCCeEEEC
Confidence 99998643 2344 55554
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=92.99 E-value=0.66 Score=33.55 Aligned_cols=88 Identities=14% Similarity=0.045 Sum_probs=54.8
Q ss_pred CchHHHHHHHHHHHHHHHHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHH
Q 026418 60 KNWYCYGKAVAEKAAWEEAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALA 136 (239)
Q Consensus 60 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~ 136 (239)
...|+.+|...+.+.+..+.+ .|+++-.+.|+.+.-+....... ............+ ..-+...+|+|.+
T Consensus 154 ~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~-~~~~~~~~~~~~p------~~r~~~pedIA~~ 226 (274)
T d2pd4a1 154 YNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIAD-FRMILKWNEINAP------LRKNVSLEEVGNA 226 (274)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTT-HHHHHHHHHHHST------TSSCCCHHHHHHH
T ss_pred chhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCc-hHHHHHHHhhhhh------ccCCcCHHHHHHH
Confidence 467999999999998887665 37899999999886553221111 1111111111111 1345679999999
Q ss_pred HHHhhcCC--CCCc-eEEEec
Q 026418 137 HILVYETP--SASG-RYLCAE 154 (239)
Q Consensus 137 ~~~~~~~~--~~~~-~y~~~~ 154 (239)
+.+++... ...| ++.+.|
T Consensus 227 v~fL~S~~s~~itG~~i~vDG 247 (274)
T d2pd4a1 227 GMYLLSSLSSGVSGEVHFVDA 247 (274)
T ss_dssp HHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHhChhhCCCcCceEEECC
Confidence 99988643 2334 555553
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=90.84 E-value=0.61 Score=33.56 Aligned_cols=89 Identities=12% Similarity=0.005 Sum_probs=52.3
Q ss_pred CchHHHHHHHHHHHHHHHHHH---cCccEEEEecCcccCCCCC-----CCCChhH---HHH-HHHHcCCCCccCCCCCCc
Q 026418 60 KNWYCYGKAVAEKAAWEEAVA---RGVDLVVVNPVLVLGPLLQ-----STVNASI---IHI-LKYLNGSAKTYANSVQAY 127 (239)
Q Consensus 60 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~-----~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~ 127 (239)
...|+.+|...+.+.+.++.+ .|+++-.+.|+.+-.+... ....... ..+ .......+ ..+.+
T Consensus 157 ~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-----l~rr~ 231 (268)
T d2h7ma1 157 YNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAP-----IGWNM 231 (268)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCT-----TCCCT
T ss_pred cchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCC-----CCCCC
Confidence 467999999999999888765 3789999999988543110 0000000 011 11111111 12345
Q ss_pred eehHHHHHHHHHhhcCC--CCCc-eEEEe
Q 026418 128 VHVRDVALAHILVYETP--SASG-RYLCA 153 (239)
Q Consensus 128 i~v~D~a~~~~~~~~~~--~~~~-~y~~~ 153 (239)
...+|+|+++.+++... ..-| +..+.
T Consensus 232 ~~p~dva~~v~fL~Sd~a~~iTG~~i~vD 260 (268)
T d2h7ma1 232 KDATPVAKTVCALLSDWLPATTGDIIYAD 260 (268)
T ss_dssp TCCHHHHHHHHHHHSSSCTTCCSEEEEES
T ss_pred CCHHHHHHHHHHHhCchhcCccCCEEEEC
Confidence 66899999999988532 2234 45554
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=82.69 E-value=2.7 Score=29.60 Aligned_cols=88 Identities=17% Similarity=0.101 Sum_probs=47.8
Q ss_pred chHHHHHHHHHHHHHHHHHH---cCccEEEEecCcccCCCCCCCCChhHHHHHHHHcCCCCccCCCCCCceehHHHHHHH
Q 026418 61 NWYCYGKAVAEKAAWEEAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAH 137 (239)
Q Consensus 61 ~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~ 137 (239)
..|+.+|...+.+.+.++.+ .|+++-.+.||.+-.+....... .........+... | ..-+...+|+|.++
T Consensus 153 ~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~-~~~~~~~~~~~~~---P--lgR~g~p~eva~~v 226 (257)
T d1fjha_ 153 LAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQ-DPRYGESIAKFVP---P--MGRRAEPSEMASVI 226 (257)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC----------------------CCC---S--TTSCCCTHHHHHHH
T ss_pred HHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcC-CHHHHHHHHhcCC---C--CCCCcCHHHHHHHH
Confidence 35999999999999888654 47999999999986543211100 0011111111111 1 12356789999999
Q ss_pred HHhhcCC--CCCc-eEEEec
Q 026418 138 ILVYETP--SASG-RYLCAE 154 (239)
Q Consensus 138 ~~~~~~~--~~~~-~y~~~~ 154 (239)
.+++... -.-| +..+.|
T Consensus 227 ~fL~S~~s~~itG~~i~vDG 246 (257)
T d1fjha_ 227 AFLMSPAASYVHGAQIVIDG 246 (257)
T ss_dssp HHHTSGGGTTCCSCEEEEST
T ss_pred HHHhCchhCCccCceEEeCC
Confidence 9988533 2334 455543
|