Citrus Sinensis ID: 026472

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------24
MEWFASMPKVELHAHLNGSIRDSTLLELARVLGEKGVIVFSDVEHVIMKSDRSLHEVFKLFDLIHVLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGLRAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEVHMSFECLLLL
cHHHHHcccHHHcccccccccHHHHHHHHHHHcccccccccHHHHHHHcccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccEEEEEEEcccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccEEEEEEEEEccccHHHHHHHHHHHHHcccccEEEEccccccccccHHHHHHHHHHHHHccccEEEcccccccHHHHHHcc
cHHHHHcccEEEEEEHHHcccHHHHHHHHHHcccccccccccHHHHHHHccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccEEEEEEEccHHHHHccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccEEEEEEEEcccccHHHHHHHHHHHHHHHcccEEEEEcccccccccHHHHHHHHHHHHHccccEEEEccHHccHHHHHHHc
mewfasmpkvelhahlngsirDSTLLELARVLGEKGVIVFSDVEHVIMKSDRSLHEVFKLFDLIHVLTTDHATVTRITQEVVEDFASENIVYLElrttpkrnesigmskRSYMDAVVEGLRAVSAVdvdfasrsidvrrpvntknmndacngtrgKKIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVgidlsgnptkgewttFLPALKFAREQGLQITLHCGEVHMSFECLLLL
MEWFASMPKVELHAHLNGSIRDSTLLELARVLGEKGVIVFSDVEHVIMKSDRSLHEVFKLFDLIHVLTTDHATVTRITQEVVedfasenivylelrttpkrnesigmsKRSYMDAVVEGLRAVsavdvdfasrsidvrrpvntknmndacngtrgkkIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEVHMSFECLLLL
MEWFASMPKVELHAHLNGSIRDSTLLELARVLGEKGVIVFSDVEHVIMKSDRSLHEVFKLFDLIHVLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGLRAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEVHMSFECLLLL
*********VELHAHLNGSIRDSTLLELARVLGEKGVIVFSDVEHVIMKSDRSLHEVFKLFDLIHVLTTDHATVTRITQEVVEDFASENIVYLELRTT************SYMDAVVEGLRAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEVHMSFECLLL*
MEWFASMPKVELHAHLNGSIRDSTLLELARVLGEKGVIVFSDVEHVIMKSDRSLHEVFKLFDLIHVLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGLRAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEVHMSFECLLLL
********KVELHAHLNGSIRDSTLLELARVLGEKGVIVFSDVEHVIMKSDRSLHEVFKLFDLIHVLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGLRAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEVHMSFECLLLL
MEWFASMPKVELHAHLNGSIRDSTLLELARVLGEKGVIVFSDVEHVIMKSDRSLHEVFKLFDLIHVLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGLRAVSAVDVDFA*********VNTKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEVHMSFECLLLL
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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oooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MEWFASMPKVELHAHLNGSIRDSTLLELARVLGEKGVIVFSDVEHVIMKSDRSLHEVFKLFDLIHVLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGLRAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEVHMSFECLLLL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query238 2.2.26 [Sep-21-2011]
Q0VC13 351 Adenosine deaminase-like yes no 0.819 0.555 0.356 2e-32
Q6DHV7 355 Adenosine deaminase-like no no 0.823 0.552 0.346 5e-32
Q80SY6 360 Adenosine deaminase-like yes no 0.827 0.547 0.339 2e-31
Q295P6 340 Adenosine deaminase-like yes no 0.823 0.576 0.386 8e-31
Q4V831 347 Adenosine deaminase-like N/A no 0.810 0.556 0.344 6e-30
Q9VHH7 337 Adenosine deaminase-like yes no 0.831 0.587 0.340 2e-29
Q4V9P6 348 Adenosine deaminase-like yes no 0.806 0.551 0.343 2e-28
Q0SQ45 332 Adenosine deaminase OS=Cl yes no 0.810 0.581 0.284 2e-17
Q8D6Q8 331 Adenosine deaminase OS=Vi yes no 0.823 0.592 0.277 3e-17
Q8XHH8 332 Adenosine deaminase OS=Cl yes no 0.810 0.581 0.284 3e-17
>sp|Q0VC13|ADAL_BOVIN Adenosine deaminase-like protein OS=Bos taurus GN=ADAL PE=2 SV=1 Back     alignment and function desciption
 Score =  139 bits (350), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 82/230 (35%), Positives = 135/230 (58%), Gaps = 35/230 (15%)

Query: 3   WFASMPKVELHAHLNGSIRDSTLLELARVLGEKGVIVFSDVEHVIMKSD-RSLHEVFKLF 61
           +++ +PKVELHAHLNGSI  +T+ +L   + +K  +   D   +I K + R+L E  ++F
Sbjct: 13  FYSKLPKVELHAHLNGSISSNTIRKL---IAKKPDLKIHDQMTMIDKGEKRTLEECLQMF 69

Query: 62  DLIHVLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGLR 121
            +IH+LTT    V  +T++V+++FA + + YLELR+TP+  ++ GM+K++Y+++++EG++
Sbjct: 70  QIIHLLTTTPEDVLMVTKDVIKEFADDGVKYLELRSTPRGEDATGMTKKTYVESILEGIK 129

Query: 122 AVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVKL 181
                +VD                            I VR L+SIDRR  + AA E VKL
Sbjct: 130 QSKEENVD----------------------------IDVRYLISIDRRGGSSAAKEAVKL 161

Query: 182 ALEM---RDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEV 228
           A E     +  V+G+DLSG+P+ G+   FL  L  A++ GL++ LH  E+
Sbjct: 162 AEEFFLSAEDTVLGLDLSGDPSAGQAKDFLEPLLEAKKSGLKLALHLSEI 211
Putative nucleoside deaminase. May catalyze the hydrolytic deamination of adenosine or some similar substrate and play a role in purine metabolism.
Bos taurus (taxid: 9913)
EC: 3EC: .EC: 5EC: .EC: 4EC: .EC: -
>sp|Q6DHV7|ADAL_HUMAN Adenosine deaminase-like protein OS=Homo sapiens GN=ADAL PE=2 SV=2 Back     alignment and function description
>sp|Q80SY6|ADAL_MOUSE Adenosine deaminase-like protein OS=Mus musculus GN=Adal PE=2 SV=1 Back     alignment and function description
>sp|Q295P6|ADAL_DROPS Adenosine deaminase-like protein OS=Drosophila pseudoobscura pseudoobscura GN=GA11319 PE=3 SV=2 Back     alignment and function description
>sp|Q4V831|ADALA_XENLA Adenosine deaminase-like protein A OS=Xenopus laevis GN=adal-a PE=2 SV=1 Back     alignment and function description
>sp|Q9VHH7|ADAL_DROME Adenosine deaminase-like protein OS=Drosophila melanogaster GN=Ada PE=2 SV=1 Back     alignment and function description
>sp|Q4V9P6|ADAL_DANRE Adenosine deaminase-like protein OS=Danio rerio GN=adal PE=2 SV=1 Back     alignment and function description
>sp|Q0SQ45|ADD_CLOPS Adenosine deaminase OS=Clostridium perfringens (strain SM101 / Type A) GN=add PE=3 SV=1 Back     alignment and function description
>sp|Q8D6Q8|ADD_VIBVU Adenosine deaminase OS=Vibrio vulnificus (strain CMCP6) GN=add PE=3 SV=1 Back     alignment and function description
>sp|Q8XHH8|ADD_CLOPE Adenosine deaminase OS=Clostridium perfringens (strain 13 / Type A) GN=add PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query238
224142856 363 predicted protein [Populus trichocarpa] 0.957 0.628 0.833 1e-108
255554947 364 Adenosine deaminase, putative [Ricinus c 0.957 0.626 0.798 1e-102
147833191 355 hypothetical protein VITISV_030807 [Viti 0.924 0.619 0.811 1e-101
359483383 359 PREDICTED: adenosine deaminase-like prot 0.924 0.612 0.811 1e-101
297813867 355 adenosine/AMP deaminase family protein [ 0.928 0.622 0.785 2e-98
449479433 363 PREDICTED: LOW QUALITY PROTEIN: adenosin 0.957 0.628 0.741 1e-97
449433942 363 PREDICTED: adenosine deaminase-like prot 0.957 0.628 0.741 3e-97
22328354 355 adenosine deaminase [Arabidopsis thalian 0.928 0.622 0.758 2e-95
356521975 363 PREDICTED: adenosine deaminase-like prot 0.974 0.639 0.741 6e-95
357480235 376 Adenosine deaminase-like protein [Medica 0.978 0.619 0.725 3e-91
>gi|224142856|ref|XP_002335976.1| predicted protein [Populus trichocarpa] gi|222836542|gb|EEE74949.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  396 bits (1018), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 190/228 (83%), Positives = 209/228 (91%)

Query: 1   MEWFASMPKVELHAHLNGSIRDSTLLELARVLGEKGVIVFSDVEHVIMKSDRSLHEVFKL 60
           MEW+ SMPK+ELHAHLNGSIRDSTLLELARVLGEKGVIVFSDVEHVIMK+DRSL EVFKL
Sbjct: 1   MEWWVSMPKIELHAHLNGSIRDSTLLELARVLGEKGVIVFSDVEHVIMKNDRSLGEVFKL 60

Query: 61  FDLIHVLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGL 120
           FDLIH+LTTDH TVTRIT+EVVEDFASEN+VYLELRTTPK+N+SIGMSK SYM+AVVEGL
Sbjct: 61  FDLIHILTTDHKTVTRITKEVVEDFASENVVYLELRTTPKKNDSIGMSKHSYMEAVVEGL 120

Query: 121 RAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVK 180
           RAV+AVD+DF     + +  +N+  MNDAC+GT+ KKIYVRLLLSIDRRETTEAA+ETVK
Sbjct: 121 RAVTAVDIDFVPHKFNTQDSLNSIAMNDACDGTKKKKIYVRLLLSIDRRETTEAAIETVK 180

Query: 181 LALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEV 228
           LALEMRDLGVVGIDLSGNP  GEW TFLPALKFA+EQGL ITLHCGEV
Sbjct: 181 LALEMRDLGVVGIDLSGNPVVGEWNTFLPALKFAQEQGLYITLHCGEV 228

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255554947|ref|XP_002518511.1| Adenosine deaminase, putative [Ricinus communis] gi|223542356|gb|EEF43898.1| Adenosine deaminase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|147833191|emb|CAN68640.1| hypothetical protein VITISV_030807 [Vitis vinifera] gi|302144084|emb|CBI23189.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359483383|ref|XP_002265831.2| PREDICTED: adenosine deaminase-like protein [Vitis vinifera] Back     alignment and taxonomy information
>gi|297813867|ref|XP_002874817.1| adenosine/AMP deaminase family protein [Arabidopsis lyrata subsp. lyrata] gi|297320654|gb|EFH51076.1| adenosine/AMP deaminase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|449479433|ref|XP_004155598.1| PREDICTED: LOW QUALITY PROTEIN: adenosine deaminase-like protein-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449433942|ref|XP_004134755.1| PREDICTED: adenosine deaminase-like protein-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|22328354|ref|NP_192397.2| adenosine deaminase [Arabidopsis thaliana] gi|20466195|gb|AAM20415.1| putative adenosine deaminase [Arabidopsis thaliana] gi|24899837|gb|AAN65133.1| putative adenosine deaminase [Arabidopsis thaliana] gi|332657036|gb|AEE82436.1| adenosine deaminase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356521975|ref|XP_003529625.1| PREDICTED: adenosine deaminase-like protein-like [Glycine max] Back     alignment and taxonomy information
>gi|357480235|ref|XP_003610403.1| Adenosine deaminase-like protein [Medicago truncatula] gi|355511458|gb|AES92600.1| Adenosine deaminase-like protein [Medicago truncatula] gi|388499194|gb|AFK37663.1| unknown [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query238
TAIR|locus:2138967 355 AT4G04880 "AT4G04880" [Arabido 0.928 0.622 0.758 1.8e-87
UNIPROTKB|Q8H3U7 368 P0496C02.124 "Os07g0661000 pro 0.932 0.603 0.666 3.5e-75
UNIPROTKB|E2RSY5 356 ADAL "Uncharacterized protein" 0.537 0.359 0.386 5.7e-36
UNIPROTKB|Q6DHV7 355 ADAL "Adenosine deaminase-like 0.542 0.363 0.376 2.1e-34
MGI|MGI:1923144 360 Adal "adenosine deaminase-like 0.546 0.361 0.357 1.5e-33
UNIPROTKB|F1LRK5 360 LOC311352 "Protein LOC311352" 0.546 0.361 0.357 2.4e-33
UNIPROTKB|Q295P6 340 GA11319 "Adenosine deaminase-l 0.491 0.344 0.398 5.8e-33
UNIPROTKB|J9P4E5328 ADAL "Uncharacterized protein" 0.537 0.390 0.386 3.8e-31
ZFIN|ZDB-GENE-050913-145 348 adal "adenosine deaminase-like 0.508 0.347 0.345 5.5e-31
UNIPROTKB|A8J7C2 461 CHLREDRAFT_175699 "Predicted p 0.298 0.154 0.591 1.3e-30
TAIR|locus:2138967 AT4G04880 "AT4G04880" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 874 (312.7 bits), Expect = 1.8e-87, P = 1.8e-87
 Identities = 173/228 (75%), Positives = 201/228 (88%)

Query:     1 MEWFASMPKVELHAHLNGSIRDSTLLELARVLGEKGVIVFSDVEHVIMKSDRSLHEVFKL 60
             MEW  S+PK+ELHAHLNGSIRDSTLLELARVLGEKGVIVF+DVEHVI K+DRSL EVFKL
Sbjct:     1 MEWIQSLPKIELHAHLNGSIRDSTLLELARVLGEKGVIVFADVEHVIQKNDRSLVEVFKL 60

Query:    61 FDLIHVLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGL 120
             FDLIH LTTDH TVTRIT+EVVEDFA EN+VYLELRTTPKR++SIGMSKRSYM+AV++GL
Sbjct:    61 FDLIHKLTTDHKTVTRITREVVEDFALENVVYLELRTTPKRSDSIGMSKRSYMEAVIQGL 120

Query:   121 RAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVK 180
             R+VS VD+DF + S       +++ +++A +G   KKIYVRLLLSIDRRETTE+AMETVK
Sbjct:   121 RSVSEVDIDFVTAS-------DSQKLHNAGDGIGRKKIYVRLLLSIDRRETTESAMETVK 173

Query:   181 LALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEV 228
             LALEMRD+GVVGIDLSGNP  GEW+TFLPAL++A++  L ITLHCGEV
Sbjct:   174 LALEMRDVGVVGIDLSGNPLVGEWSTFLPALQYAKDNDLHITLHCGEV 221
GO:0004000 "adenosine deaminase activity" evidence=IBA
GO:0005737 "cytoplasm" evidence=IBA
GO:0006154 "adenosine catabolic process" evidence=IBA
GO:0009168 "purine ribonucleoside monophosphate biosynthetic process" evidence=IEA;ISS
GO:0019239 "deaminase activity" evidence=IEA;ISS
UNIPROTKB|Q8H3U7 P0496C02.124 "Os07g0661000 protein" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|E2RSY5 ADAL "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q6DHV7 ADAL "Adenosine deaminase-like protein" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:1923144 Adal "adenosine deaminase-like" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1LRK5 LOC311352 "Protein LOC311352" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q295P6 GA11319 "Adenosine deaminase-like protein" [Drosophila pseudoobscura pseudoobscura (taxid:46245)] Back     alignment and assigned GO terms
UNIPROTKB|J9P4E5 ADAL "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050913-145 adal "adenosine deaminase-like" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|A8J7C2 CHLREDRAFT_175699 "Predicted protein" [Chlamydomonas reinhardtii (taxid:3055)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.5.4LOW CONFIDENCE prediction!
3rd Layer3.5.4.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_fgenesh4_pm.C_5350002
hypothetical protein (364 aa)
(Populus trichocarpa)
Predicted Functional Partners:
grail3.0022041801
SubName- Full=Putative uncharacterized protein; (342 aa)
     •  0.899
grail3.0006001701
hypothetical protein (247 aa)
     •  0.899
eugene3.00440120
hypothetical protein (390 aa)
     •  0.899
estExt_fgenesh4_pm.C_970013
SubName- Full=Putative uncharacterized protein; (386 aa)
     •  0.899
estExt_Genewise1_v1.C_LG_VIII1052
SubName- Full=Putative uncharacterized protein; (341 aa)
     •  0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query238
cd00443 305 cd00443, ADA_AMPD, Adenosine/AMP deaminase 5e-42
cd01320 325 cd01320, ADA, Adenosine deaminase (ADA) is a monom 1e-34
PRK09358 340 PRK09358, PRK09358, adenosine deaminase; Provision 6e-34
TIGR01430 324 TIGR01430, aden_deam, adenosine deaminase 2e-28
COG1816 345 COG1816, Add, Adenosine deaminase [Nucleotide tran 1e-22
pfam00962 328 pfam00962, A_deaminase, Adenosine/AMP deaminase 2e-18
PTZ00124 362 PTZ00124, PTZ00124, adenosine deaminase; Provision 0.003
>gnl|CDD|238250 cd00443, ADA_AMPD, Adenosine/AMP deaminase Back     alignment and domain information 
 Score =  144 bits (365), Expect = 5e-42
 Identities = 83/240 (34%), Positives = 111/240 (46%), Gaps = 62/240 (25%)

Query: 7   MPKVELHAHLNGSIRDSTLLELARVLGEKGVIVFSDVEHVIMKSDRSLHEVFKLFDLIHV 66
           +PKVELHAHL+GSI   TLLEL     +K                    E F+ F L+H 
Sbjct: 1   LPKVELHAHLSGSISPETLLEL----IKK--------------------EFFEKFLLVHN 36

Query: 67  LTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNE-SIGMSKRSYMDAVVEGLRAVSA 125
           L      + R  +EV+E+FA +N+ YLELRTTP+  E   G++K  Y   V+EG+     
Sbjct: 37  LLQKGEALARALKEVIEEFAEDNVQYLELRTTPRLLETEKGLTKEQYWLLVIEGISEAKQ 96

Query: 126 VDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRET----TEAAMETVKL 181
                                           I VRL+LS+DRR         A E ++L
Sbjct: 97  W----------------------------FPPIKVRLILSVDRRGPYVQNYLVASEILEL 128

Query: 182 ALEMRDLGVVGIDLSGNPTKGE--WTTFLPALKFAREQG-LQITLHCGEVHMSFECLLLL 238
           A  + +  VVGIDL G+ +KGE     F    ++AR  G L +TLHCGE   + E LL  
Sbjct: 129 AKFLSN-YVVGIDLVGDESKGENPLRDFYSYYEYARRLGLLGLTLHCGETG-NREELLQA 186

Adenosine deaminases (ADAs) are present in pro- and eukaryotic organisms and catalyze the zinc dependent irreversible deamination of adenosine nucleosides to inosine nucleosides and ammonia. The eukaryotic AMP deaminase catalyzes a similar reaction leading to the hydrolytic removal of an amino group at the 6 position of the adenine nucleotide ring, a branch point in the adenylate catabolic pathway. Length = 305
>gnl|CDD|238645 cd01320, ADA, Adenosine deaminase (ADA) is a monomeric zinc dependent enzyme which catalyzes the irreversible hydrolytic deamination of both adenosine, as well as desoxyadenosine, to ammonia and inosine or desoxyinosine, respectively Back     alignment and domain information
>gnl|CDD|236480 PRK09358, PRK09358, adenosine deaminase; Provisional Back     alignment and domain information
>gnl|CDD|233410 TIGR01430, aden_deam, adenosine deaminase Back     alignment and domain information
>gnl|CDD|224729 COG1816, Add, Adenosine deaminase [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|216216 pfam00962, A_deaminase, Adenosine/AMP deaminase Back     alignment and domain information
>gnl|CDD|173415 PTZ00124, PTZ00124, adenosine deaminase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 238
PTZ00124 362 adenosine deaminase; Provisional 100.0
cd01321 345 ADGF Adenosine deaminase-related growth factors (A 100.0
KOG1097 399 consensus Adenine deaminase/adenosine deaminase [N 100.0
cd00443 305 ADA_AMPD Adenosine/AMP deaminase. Adenosine deamin 100.0
PF00962 331 A_deaminase: Adenosine/AMP deaminase immunodeficie 100.0
COG1816 345 Add Adenosine deaminase [Nucleotide transport and 100.0
PRK09358 340 adenosine deaminase; Provisional 100.0
TIGR01430 324 aden_deam adenosine deaminase. This family include 100.0
cd01320 325 ADA Adenosine deaminase (ADA) is a monomeric zinc 100.0
TIGR01431 479 adm_rel adenosine deaminase-related growth factor. 100.0
TIGR01224 377 hutI imidazolonepropionase. This enzyme catalyzes 99.16
cd01296 371 Imidazolone-5PH Imidazolonepropionase/imidazolone- 98.81
PRK09230 426 cytosine deaminase; Provisional 98.79
cd01319 496 AMPD AMP deaminase (AMPD) catalyzes the hydrolytic 98.5
PLN02768 835 AMP deaminase 98.31
PLN03055 602 AMP deaminase; Provisional 98.29
TIGR01429 611 AMP_deaminase AMP deaminase. This model describes 98.25
PTZ00310 1453 AMP deaminase; Provisional 98.1
cd01292 275 metallo-dependent_hydrolases Superfamily of metall 97.74
PRK09356 406 imidazolonepropionase; Validated 97.71
PRK08393 424 N-ethylammeline chlorohydrolase; Provisional 97.65
cd01298 411 ATZ_TRZ_like TRZ/ATZ family contains enzymes from 97.64
cd01293 398 Bact_CD Bacterial cytosine deaminase and related m 97.38
KOG1096 768 consensus Adenosine monophosphate deaminase [Nucle 96.57
PRK07583 438 cytosine deaminase-like protein; Validated 95.9
cd01313 418 Met_dep_hydrolase_E Metallo-dependent hydrolases, 95.62
PRK07213 375 chlorohydrolase; Provisional 95.35
TIGR02022 455 hutF formiminoglutamate deiminase. In some species 95.3
PRK06687 419 chlorohydrolase; Validated 95.13
PRK05985 391 cytosine deaminase; Provisional 95.09
PRK06886 329 hypothetical protein; Validated 95.06
PRK06380 418 metal-dependent hydrolase; Provisional 95.05
cd01305 263 archeal_chlorohydrolases Predicted chlorohydrolase 94.95
PRK06846 410 putative deaminase; Validated 94.86
TIGR03314 441 Se_ssnA putative selenium metabolism protein SsnA. 94.85
PRK14085 382 imidazolonepropionase; Provisional 94.66
PRK09228 433 guanine deaminase; Provisional 94.44
PRK07203 442 putative chlorohydrolase/aminohydrolase; Validated 94.29
PRK06038 430 N-ethylammeline chlorohydrolase; Provisional 93.91
PRK08204 449 hypothetical protein; Provisional 93.69
cd01303 429 GDEase Guanine deaminase (GDEase). Guanine deamina 93.58
PRK12393 457 amidohydrolase; Provisional 93.55
PRK15493 435 5-methylthioadenosine/S-adenosylhomocysteine deami 92.95
TIGR02967 401 guan_deamin guanine deaminase. This model describe 92.84
PRK08203 451 hydroxydechloroatrazine ethylaminohydrolase; Revie 92.72
PRK09229 456 N-formimino-L-glutamate deiminase; Validated 92.45
COG1099 254 Predicted metal-dependent hydrolases with the TIM- 92.14
cd01312 381 Met_dep_hydrolase_D Metallo-dependent hydrolases, 91.73
TIGR02090 363 LEU1_arch isopropylmalate/citramalate/homocitrate 91.61
PRK07572 426 cytosine deaminase; Validated 91.6
cd07948262 DRE_TIM_HCS Saccharomyces cerevisiae homocitrate s 90.68
PRK09045 443 N-ethylammeline chlorohydrolase; Provisional 90.09
PRK08418 408 chlorohydrolase; Provisional 89.08
COG0402 421 SsnA Cytosine deaminase and related metal-dependen 87.68
cd07939259 DRE_TIM_NifV Streptomyces rubellomurinus FrbC and 87.62
PRK11858 378 aksA trans-homoaconitate synthase; Reviewed 87.42
cd03174265 DRE_TIM_metallolyase DRE-TIM metallolyase superfam 84.87
PRK07228 445 N-ethylammeline chlorohydrolase; Provisional 84.74
cd07945280 DRE_TIM_CMS Leptospira interrogans citramalate syn 83.76
COG1831 285 Predicted metal-dependent hydrolase (urease superf 82.65
>PTZ00124 adenosine deaminase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=3.4e-46  Score=338.91  Aligned_cols=203  Identities=22%  Similarity=0.275  Sum_probs=177.3

Q ss_pred             hhhhcCChhhhccccCCCCCHHHHHHHHHHhccCCCCCchhhhHHH-----hcCCCCHHHHHHHhHHHHhhcCChHHHHH
Q 026472            2 EWFASMPKVELHAHLNGSIRDSTLLELARVLGEKGVIVFSDVEHVI-----MKSDRSLHEVFKLFDLIHVLTTDHATVTR   76 (238)
Q Consensus         2 ~~~~~lPK~eLH~HL~Gsi~~~tl~~la~~~~~~~~~~~~~~~~~~-----~~~~~~l~~f~~~f~~~~~l~~~~~~~~~   76 (238)
                      +|+++|||+|||+||+||++|+|+++||++   +|+.+..+.+.+.     ...+.+|.+||+.|..+..++++++++++
T Consensus        30 ~~~~~lPKvELH~HLdGsi~~~tl~~La~~---~~~~~~~~~~~l~~~~~~~~~~~~L~~fl~~f~~~~~vl~t~~dl~r  106 (362)
T PTZ00124         30 KIWKRIPKCELHCHLDLCFSVDFFLSCIRK---YNLQPNLSDEEILDYYLFAKGGKSLGEFVEKAIRVADIFNDYEVIED  106 (362)
T ss_pred             HHHhcCCceeEeecccCCCCHHHHHHHHHH---cCCCCCCCHHHHHHHHhcccCCCCHHHHHHHHHHHHHHhCCHHHHHH
Confidence            589999999999999999999999999985   6665433444332     13468999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCeEEEEeecCCCC-ccCCCCHHHHHHHHHHHHHhhhhccccccccccccccccccccccccccCCCC
Q 026472           77 ITQEVVEDFASENIVYLELRTTPKRN-ESIGMSKRSYMDAVVEGLRAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRG  155 (238)
Q Consensus        77 ~~~~~~~~~a~dgV~Y~Elr~~P~~~-~~~~~~~~~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (238)
                      +++++++++++|||+|+|+||+|..+ ...|++.+++++++.+|++++++                           ..+
T Consensus       107 ~a~e~~~d~~~dgV~Y~Eir~~P~~~~~~~gl~~~~vv~av~~g~~~a~~---------------------------~~~  159 (362)
T PTZ00124        107 LAKHAVFNKYKEGVVLMEFRYSPTFVAFKHNLDIDLIHQAIVKGIKEAVE---------------------------LLD  159 (362)
T ss_pred             HHHHHHHHHHHcCCEEEEEEcCchhhhcCCCCCHHHHHHHHHHHHHHHHh---------------------------ccC
Confidence            99999999999999999999999754 45799999999999999998753                           125


Q ss_pred             CCcEEEEEEEEeCCCCHHHHHHHHHHHHhcCCCcEEEEeccCCCCCCCcccHHHHHHHHHHcCCCeeEecCCCCChh---
Q 026472          156 KKIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEVHMSF---  232 (238)
Q Consensus       156 ~~i~vrlI~~~~R~~~~e~~~~~~~la~~~~~~~vvG~dL~G~E~~~~~~~f~~~f~~ar~~gl~~t~HAGE~~~~~---  232 (238)
                      +||.+|+|+|++|+.+++.+.+.+++|.++++. ||||||+|+|..  +..|.++|+.||+.|+++|+||||+++|.   
T Consensus       160 ~gI~~~lI~~~~R~~~~e~a~e~~~~a~~~~~~-vvGiDLaG~E~~--~~~f~~~f~~Ar~~Gl~~t~HaGE~~~~~~~~  236 (362)
T PTZ00124        160 HKIEVGLLCIGDTGHDAAPIKESADFCLKHKAD-FVGFDHAGHEVD--LKPFKDIFDYVREAGVNLTVHAGEDVTLPNLN  236 (362)
T ss_pred             CCceEeEEEEecCCCCHHHHHHHHHHHHhccCC-eEEEeccCCCCC--cHHHHHHHHHHHHCCCCEEEEeCCCCCCCcch
Confidence            799999999999999999999999999998775 999999999985  36799999999999999999999986544   


Q ss_pred             HHHhh
Q 026472          233 ECLLL  237 (238)
Q Consensus       233 ~i~~~  237 (238)
                      +++++
T Consensus       237 ~v~~a  241 (362)
T PTZ00124        237 TLYSA  241 (362)
T ss_pred             hHHHH
Confidence            55554

>cd01321 ADGF Adenosine deaminase-related growth factors (ADGF), a novel family of secreted growth-factors with sequence similarty to adenosine deaminase Back     alignment and domain information
>KOG1097 consensus Adenine deaminase/adenosine deaminase [Nucleotide transport and metabolism] Back     alignment and domain information
>cd00443 ADA_AMPD Adenosine/AMP deaminase Back     alignment and domain information
>PF00962 A_deaminase: Adenosine/AMP deaminase immunodeficiency disease (SCID); InterPro: IPR001365 Adenosine deaminase (3 Back     alignment and domain information
>COG1816 Add Adenosine deaminase [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK09358 adenosine deaminase; Provisional Back     alignment and domain information
>TIGR01430 aden_deam adenosine deaminase Back     alignment and domain information
>cd01320 ADA Adenosine deaminase (ADA) is a monomeric zinc dependent enzyme which catalyzes the irreversible hydrolytic deamination of both adenosine, as well as desoxyadenosine, to ammonia and inosine or desoxyinosine, respectively Back     alignment and domain information
>TIGR01431 adm_rel adenosine deaminase-related growth factor Back     alignment and domain information
>TIGR01224 hutI imidazolonepropionase Back     alignment and domain information
>cd01296 Imidazolone-5PH Imidazolonepropionase/imidazolone-5-propionate hydrolase (Imidazolone-5PH) catalyzes the third step in the histidine degradation pathway, the hydrolysis of (S)-3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate to N-formimidoyl-L-glutamate Back     alignment and domain information
>PRK09230 cytosine deaminase; Provisional Back     alignment and domain information
>cd01319 AMPD AMP deaminase (AMPD) catalyzes the hydrolytic deamination of adensosine monophosphate (AMP) at position 6 of the adenine nucleotide ring Back     alignment and domain information
>PLN02768 AMP deaminase Back     alignment and domain information
>PLN03055 AMP deaminase; Provisional Back     alignment and domain information
>TIGR01429 AMP_deaminase AMP deaminase Back     alignment and domain information
>PTZ00310 AMP deaminase; Provisional Back     alignment and domain information
>cd01292 metallo-dependent_hydrolases Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site Back     alignment and domain information
>PRK09356 imidazolonepropionase; Validated Back     alignment and domain information
>PRK08393 N-ethylammeline chlorohydrolase; Provisional Back     alignment and domain information
>cd01298 ATZ_TRZ_like TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases Back     alignment and domain information
>cd01293 Bact_CD Bacterial cytosine deaminase and related metal-dependent hydrolases Back     alignment and domain information
>KOG1096 consensus Adenosine monophosphate deaminase [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK07583 cytosine deaminase-like protein; Validated Back     alignment and domain information
>cd01313 Met_dep_hydrolase_E Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site Back     alignment and domain information
>PRK07213 chlorohydrolase; Provisional Back     alignment and domain information
>TIGR02022 hutF formiminoglutamate deiminase Back     alignment and domain information
>PRK06687 chlorohydrolase; Validated Back     alignment and domain information
>PRK05985 cytosine deaminase; Provisional Back     alignment and domain information
>PRK06886 hypothetical protein; Validated Back     alignment and domain information
>PRK06380 metal-dependent hydrolase; Provisional Back     alignment and domain information
>cd01305 archeal_chlorohydrolases Predicted chlorohydrolases Back     alignment and domain information
>PRK06846 putative deaminase; Validated Back     alignment and domain information
>TIGR03314 Se_ssnA putative selenium metabolism protein SsnA Back     alignment and domain information
>PRK14085 imidazolonepropionase; Provisional Back     alignment and domain information
>PRK09228 guanine deaminase; Provisional Back     alignment and domain information
>PRK07203 putative chlorohydrolase/aminohydrolase; Validated Back     alignment and domain information
>PRK06038 N-ethylammeline chlorohydrolase; Provisional Back     alignment and domain information
>PRK08204 hypothetical protein; Provisional Back     alignment and domain information
>cd01303 GDEase Guanine deaminase (GDEase) Back     alignment and domain information
>PRK12393 amidohydrolase; Provisional Back     alignment and domain information
>PRK15493 5-methylthioadenosine/S-adenosylhomocysteine deaminase; Provisional Back     alignment and domain information
>TIGR02967 guan_deamin guanine deaminase Back     alignment and domain information
>PRK08203 hydroxydechloroatrazine ethylaminohydrolase; Reviewed Back     alignment and domain information
>PRK09229 N-formimino-L-glutamate deiminase; Validated Back     alignment and domain information
>COG1099 Predicted metal-dependent hydrolases with the TIM-barrel fold [General function prediction only] Back     alignment and domain information
>cd01312 Met_dep_hydrolase_D Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site Back     alignment and domain information
>TIGR02090 LEU1_arch isopropylmalate/citramalate/homocitrate synthases Back     alignment and domain information
>PRK07572 cytosine deaminase; Validated Back     alignment and domain information
>cd07948 DRE_TIM_HCS Saccharomyces cerevisiae homocitrate synthase and related proteins, catalytic TIM barrel domain Back     alignment and domain information
>PRK09045 N-ethylammeline chlorohydrolase; Provisional Back     alignment and domain information
>PRK08418 chlorohydrolase; Provisional Back     alignment and domain information
>COG0402 SsnA Cytosine deaminase and related metal-dependent hydrolases [Nucleotide transport and metabolism / General function prediction only] Back     alignment and domain information
>cd07939 DRE_TIM_NifV Streptomyces rubellomurinus FrbC and related proteins, catalytic TIM barrel domain Back     alignment and domain information
>PRK11858 aksA trans-homoaconitate synthase; Reviewed Back     alignment and domain information
>cd03174 DRE_TIM_metallolyase DRE-TIM metallolyase superfamily Back     alignment and domain information
>PRK07228 N-ethylammeline chlorohydrolase; Provisional Back     alignment and domain information
>cd07945 DRE_TIM_CMS Leptospira interrogans citramalate synthase (CMS) and related proteins, N-terminal catalytic TIM barrel domain Back     alignment and domain information
>COG1831 Predicted metal-dependent hydrolase (urease superfamily) [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query238
4gxw_A 380 Crystal Structure Of A Cog1816 Amidohydrolase (Targ 1e-11
1fkw_A 349 Murine Adenosine Deaminase (D295e) Length = 349 6e-09
1uio_A 349 Adenosine Deaminase (His 238 Ala Mutant) Length = 3 6e-09
1a4l_A 349 Ada Structure Complexed With Deoxycoformycin At Ph 6e-09
1fkx_A 349 Murine Adenosine Deaminase (D296a) Length = 349 6e-09
1uip_A 349 Adenosine Deaminase (His 238 Glu Mutant) Length = 3 6e-09
2ada_A 352 Atomic Structure Of Adenosine Deaminase Complexed W 7e-09
1ndv_A 356 Crystal Structure Of Adenosine Deaminase Complexed 8e-09
2bgn_E 363 Hiv-1 Tat Protein Derived N-Terminal Nonapeptide Tr 1e-08
1krm_A 356 Crystal Structure Of Bovine Adenosine Deaminase Com 1e-08
1w1i_E 357 Crystal Structure Of Dipeptidyl Peptidase Iv (Dppiv 1e-08
3km8_A 352 Crystal Structuore Of Adenosine Deaminase From Mus 2e-08
3t1g_A 353 Engineering Of Organophosphate Hydrolase By Computa 9e-08
3iar_A 367 The Crystal Structure Of Human Adenosine Deaminase 3e-07
3ou8_A 326 The Crystal Structure Of Adenosine Deaminase From P 1e-06
>pdb|4GXW|A Chain A, Crystal Structure Of A Cog1816 Amidohydrolase (Target Efi-505188) From Burkhoderia Ambifaria, With Bound Zn Length = 380 Back     alignment and structure 
Iteration: 1

 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 98/234 (41%), Gaps = 40/234 (17%)
Query: 4   FASMPKVELHAHLNGSIRDSTLLELARVLGEKGVIVFSDVEHVIMKSDRSLHEVFKLFDL 63
           F ++PKVELH HL G++R  T + LA+  G    I  ++++    + ++ +  +  L  L
Sbjct: 26  FHALPKVELHCHLLGAVRHDTFVALAQRSGAP--IERAEIDAFYARGEKPVGVLHVLRAL 83
Query: 64  IHVLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDA---VVEGL 120
              L T    + RI  E +ED A+ N+ + E    P    ++ +S   Y DA   +V G+
Sbjct: 84  DRYLLTRPDDLRRIAYEYLEDAAAHNVRHAEFFWNP--TGTVRVSGIPYADAQAAIVTGM 141
Query: 121 RAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVK 180
           R                             +  R   I  RL+ SIDR +  + A+  V 
Sbjct: 142 R-----------------------------DAARDFGIGARLIPSIDREQDPDEAVAIVD 172
Query: 181 LALEMR--DLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEVHMSF 232
                R  ++  +GID   N    E   F  A + AR  G + T H GE  M +
Sbjct: 173 WMKANRADEVAGIGIDYRENDRPPE--LFWKAYRDARAAGFRTTAHAGEFGMPW 224
>pdb|1FKW|A Chain A, Murine Adenosine Deaminase (D295e) Length = 349 Back     alignment and structure
>pdb|1UIO|A Chain A, Adenosine Deaminase (His 238 Ala Mutant) Length = 349 Back     alignment and structure
>pdb|1A4L|A Chain A, Ada Structure Complexed With Deoxycoformycin At Ph 7.0 Length = 349 Back     alignment and structure
>pdb|1FKX|A Chain A, Murine Adenosine Deaminase (D296a) Length = 349 Back     alignment and structure
>pdb|1UIP|A Chain A, Adenosine Deaminase (His 238 Glu Mutant) Length = 349 Back     alignment and structure
>pdb|2ADA|A Chain A, Atomic Structure Of Adenosine Deaminase Complexed With A Transition-State Analog: Understanding Catalysis And Immunodeficiency Mutations Length = 352 Back     alignment and structure
>pdb|1NDV|A Chain A, Crystal Structure Of Adenosine Deaminase Complexed With Fr117016 Length = 356 Back     alignment and structure
>pdb|2BGN|E Chain E, Hiv-1 Tat Protein Derived N-Terminal Nonapeptide Trp2-Tat (1-9) Bound To The Active Site Of Dipeptidyl Peptidase Iv (Cd26) Length = 363 Back     alignment and structure
>pdb|1KRM|A Chain A, Crystal Structure Of Bovine Adenosine Deaminase Complexed With 6-Hydroxyl-1,6-Dihydropurine Riboside Length = 356 Back     alignment and structure
>pdb|1W1I|E Chain E, Crystal Structure Of Dipeptidyl Peptidase Iv (Dppiv Or Cd26) In Complex With Adenosine Deaminase Length = 357 Back     alignment and structure
>pdb|3KM8|A Chain A, Crystal Structuore Of Adenosine Deaminase From Mus Musculus Complexed With 9-Deazainosine Length = 352 Back     alignment and structure
>pdb|3T1G|A Chain A, Engineering Of Organophosphate Hydrolase By Computational Design And Directed Evolution Length = 353 Back     alignment and structure
>pdb|3IAR|A Chain A, The Crystal Structure Of Human Adenosine Deaminase Length = 367 Back     alignment and structure
>pdb|3OU8|A Chain A, The Crystal Structure Of Adenosine Deaminase From Pseudomonas Aeruginosa Length = 326 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query238
3pao_A 326 Adenosine deaminase; structural genomics, PSI-2, p 7e-38
3rys_A 343 Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2 6e-37
2pgf_A 371 Adenosine deaminase; metallo-dependent hydrolase, 2e-34
3iar_A 367 Adenosine deaminase; purine metabolism structural 3e-33
3lgd_A 508 Adenosine deaminase CECR1; TIM barrel, dimerizatio 4e-27
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-04
>3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A* Length = 326 Back     alignment and structure
 Score =  133 bits (338), Expect = 7e-38
 Identities = 53/234 (22%), Positives = 88/234 (37%), Gaps = 47/234 (20%)

Query: 2   EWFASMPKVELHAHLNGSIRDSTLLELARVLGEKGV-IVFSDVEHVIMKSD-RSLHEVFK 59
           EW  ++PK ELH HL G++    L  LA       + + ++DVE +       +L E   
Sbjct: 5   EWLNALPKAELHLHLEGTLEPELLFALAE---RNRIALPWNDVETLRKAYAFNNLQEFLD 61

Query: 60  LFDL-IHVLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVE 118
           L+     VL T+      +T   ++   ++N+V++E    P+ +   G+     +  +  
Sbjct: 62  LYYAGADVLRTEQD-FYDLTWAYLQKCKAQNVVHVEPFFDPQTHTDRGIPFEVVLAGIRA 120

Query: 119 GLRAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMET 178
            LR                              G +   I   L+LS  R  + E A +T
Sbjct: 121 ALRD-----------------------------GEKLLGIRHGLILSFLRHLSEEQAQKT 151

Query: 179 VKLALEMRDLGVVGIDLSGN-----PTKGEWTTFLPALKFAREQGLQITLHCGE 227
           +  AL  RD   + + L  +     P+K     F      AR +G     H GE
Sbjct: 152 LDQALPFRD-AFIAVGLDSSEVGHPPSK-----FQRVFDRARSEGFLTVAHAGE 199
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} Length = 343 Back     alignment and structure
>2pgf_A Adenosine deaminase; metallo-dependent hydrolase, structural genomics, medical ST genomics of pathogenic protozoa consortium, MSGPP; HET: MSE ADN; 1.89A {Plasmodium vivax} PDB: 2pgr_A* 2qvn_A* 3ewc_A* 3ewd_A* 2amx_A Length = 371 Back     alignment and structure
>3iar_A Adenosine deaminase; purine metabolism structural genomics, structural genomics consortium, SGC, D mutation, hereditary hemolytic anemia, hydrolase; HET: 3D1; 1.52A {Homo sapiens} PDB: 2bgn_E* 1w1i_E* 1qxl_A* 1krm_A* 1vfl_A 1ndv_A* 1ndy_A* 1ndz_A* 1o5r_A* 1uml_A* 1v79_A* 1v7a_A* 1ndw_A 1wxy_A* 1wxz_A* 2e1w_A* 2z7g_A* 2ada_A* 3mvi_A 1a4l_A* ... Length = 367 Back     alignment and structure
>3lgd_A Adenosine deaminase CECR1; TIM barrel, dimerization and receptor binding domains, glyco hydrolase, growth factor, secreted; HET: NAG; 2.00A {Homo sapiens} PDB: 3lgg_A* Length = 508 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query238
4gxw_A 380 Adenosine deaminase; amidohydrolase, COG1816, EFI, 100.0
3pao_A 326 Adenosine deaminase; structural genomics, PSI-2, p 100.0
3rys_A 343 Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2 100.0
3iar_A 367 Adenosine deaminase; purine metabolism structural 100.0
2pgf_A 371 Adenosine deaminase; metallo-dependent hydrolase, 100.0
3lgd_A 508 Adenosine deaminase CECR1; TIM barrel, dimerizatio 100.0
2a3l_A 701 AMP deaminase, AMPD; atampd, AT2G38280, adenosine 99.94
4dyk_A 451 Amidohydrolase; adenosine deaminase, nysgrc, struc 97.8
3h4u_A 479 Amidohydrolase; signature of Zn ligands, structura 97.74
3ls9_A 456 Triazine hydrolase; atrazine chlorohydrolase TRZN; 97.69
4f0r_A 447 5-methylthioadenosine/S-adenosylhomocysteine DEAM; 97.38
4dzh_A 472 Amidohydrolase; adenosine deaminase, nysgrc, struc 97.28
3lnp_A 468 Amidohydrolase family protein OLEI01672_1_465; TIM 97.09
3mdu_A 453 N-formimino-L-glutamate iminohydrolase; amonohydra 96.47
1ra0_A 430 Cytosine deaminase; alpha-beta barrel, hexamer, co 94.92
4aql_A 476 Guanine deaminase; hydrolase, purine metabolism; H 94.24
3v7p_A 427 Amidohydrolase family protein; iron binding site, 93.38
2qt3_A 403 N-isopropylammelide isopropyl amidohydrolase; N-is 90.49
4f0l_A 458 Amidohydrolase; ssgcid, structural genomics, seatt 90.3
1p1m_A 406 Hypothetical protein TM0936; putative metal depend 90.28
2paj_A 492 Putative cytosine/guanine deaminase; NYSGXRC, PSI- 88.89
1ydn_A295 Hydroxymethylglutaryl-COA lyase; TIM-barrel protei 86.62
3cjp_A 272 Predicted amidohydrolase, dihydroorotase family; s 86.6
2i9u_A 439 Cytosine/guanine deaminase related protein; protei 86.26
2ztj_A 382 Homocitrate synthase; (beta/alpha)8 TIM barrel, su 83.37
2ftp_A302 Hydroxymethylglutaryl-COA lyase; structural genomi 82.38
1ydo_A307 HMG-COA lyase; TIM-barrel protein, structural geno 81.47
3irs_A 291 Uncharacterized protein BB4693; structural genomic 81.11
2cw6_A298 Hydroxymethylglutaryl-COA lyase, mitochondrial; HM 80.69
3ble_A 337 Citramalate synthase from leptospira interrogans; 80.52
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria} Back     alignment and structure
Probab=100.00  E-value=2.9e-49  Score=360.42  Aligned_cols=203  Identities=28%  Similarity=0.384  Sum_probs=182.9

Q ss_pred             hhhhcCChhhhccccCCCCCHHHHHHHHHHhccCCCCC-chhhhHHHh--cCCCCHHHHHHHhHHHHhhcCChHHHHHHH
Q 026472            2 EWFASMPKVELHAHLNGSIRDSTLLELARVLGEKGVIV-FSDVEHVIM--KSDRSLHEVFKLFDLIHVLTTDHATVTRIT   78 (238)
Q Consensus         2 ~~~~~lPK~eLH~HL~Gsi~~~tl~~la~~~~~~~~~~-~~~~~~~~~--~~~~~l~~f~~~f~~~~~l~~~~~~~~~~~   78 (238)
                      +||++|||+|||+||+||++|+|+++||++   +|+++ ..+++.++.  ....++.+|+..|+.  .++++++++++++
T Consensus        24 ~Fi~~LPKvELH~HLdGsl~p~tl~~LA~~---~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~vl~t~ed~~r~a   98 (380)
T 4gxw_A           24 AFFHALPKVELHCHLLGAVRHDTFVALAQR---SGAPIERAEIDAFYARGEKPVGVLHVLRALDR--YLLTRPDDLRRIA   98 (380)
T ss_dssp             HHHHHSCEEECCBBGGGCCCHHHHHHHHHH---HTCSCCTTHHHHHHCCCSSCCCSHHHHHHHHH--HTCCSHHHHHHHH
T ss_pred             HHHHhChhHHhhcCCcCCCCHHHHHHHHHH---hCCCCCcccHHHHHHhhhccccHHHHHHHHHH--HHcCCHHHHHHHH
Confidence            699999999999999999999999999995   67755 345666543  245678888888874  4899999999999


Q ss_pred             HHHHHHHHhcCCeEEEEeecCCCCc-cCCCCHHHHHHHHHHHHHhhhhccccccccccccccccccccccccccCCCCCC
Q 026472           79 QEVVEDFASENIVYLELRTTPKRNE-SIGMSKRSYMDAVVEGLRAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKK  157 (238)
Q Consensus        79 ~~~~~~~a~dgV~Y~Elr~~P~~~~-~~~~~~~~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (238)
                      +++++++++|||+|+|+||+|..+. ..|++++++++++.+|+++++                             +++|
T Consensus        99 ~e~~ed~a~dgV~Y~Eirf~P~~~~~~~Gl~~~~vv~av~~g~~~a~-----------------------------~~~g  149 (380)
T 4gxw_A           99 YEYLEDAAAHNVRHAEFFWNPTGTVRVSGIPYADAQAAIVTGMRDAA-----------------------------RDFG  149 (380)
T ss_dssp             HHHHHHHHTTTEEEEEEEECHHHHHHTTCCCHHHHHHHHHHHHHHHH-----------------------------HHHC
T ss_pred             HHHHHHHHHCCCeEEEEEcCHHHhccccCCCHHHHHHHHHHHHHHHH-----------------------------HhcC
Confidence            9999999999999999999998775 479999999999999999875                             3579


Q ss_pred             cEEEEEEEEeCCCCHHHHHHHHHHHHhcCCCcEEEEeccCCCCCCCcccHHHHHHHHHHcCCCeeEecCCCCCh-hHHHh
Q 026472          158 IYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEVHMS-FECLL  236 (238)
Q Consensus       158 i~vrlI~~~~R~~~~e~~~~~~~la~~~~~~~vvG~dL~G~E~~~~~~~f~~~f~~ar~~gl~~t~HAGE~~~~-~~i~~  236 (238)
                      |.+|+|+|++|+.+++.+.+++++|.++++++||||||+|+|.++|+..|.++|+.||+.|+++|+||||.++| ++||+
T Consensus       150 i~~rlI~~~~R~~~~e~a~~~~~~a~~~~~~~VvG~dL~g~E~~~p~~~f~~~f~~ar~~Gl~~t~HAGE~~~p~~~i~~  229 (380)
T 4gxw_A          150 IGARLIPSIDREQDPDEAVAIVDWMKANRADEVAGIGIDYRENDRPPELFWKAYRDARAAGFRTTAHAGEFGMPWRNVET  229 (380)
T ss_dssp             CEEEEEEEEETTSCHHHHHHHHHHHHHTCCTTBCEEEEESCCTTCCGGGGHHHHHHHHHTTCEEEEEESCTTCCHHHHHH
T ss_pred             CcEEEEEeecCCCCHHHHHHHHHHHHHhCCCCEEEEeecCCCCCCCHHHHHHHHHHHHHcCCCeeeeccccCCchHHHHH
Confidence            99999999999999999999999999999989999999999999999999999999999999999999999976 79998


Q ss_pred             hC
Q 026472          237 LL  238 (238)
Q Consensus       237 ~~  238 (238)
                      +|
T Consensus       230 al  231 (380)
T 4gxw_A          230 AV  231 (380)
T ss_dssp             HH
T ss_pred             HH
Confidence            74
>3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A* Back     alignment and structure
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0 Back     alignment and structure
>3iar_A Adenosine deaminase; purine metabolism structural genomics, structural genomics consortium, SGC, D mutation, hereditary hemolytic anemia, hydrolase; HET: 3D1; 1.52A {Homo sapiens} SCOP: c.1.9.1 PDB: 2bgn_E* 1w1i_E* 1qxl_A* 1krm_A* 1vfl_A 1ndv_A* 1ndy_A* 1ndz_A* 1o5r_A* 1uml_A* 1v79_A* 1v7a_A* 1ndw_A 1wxy_A* 1wxz_A* 2e1w_A* 2z7g_A* 2ada_A* 3mvi_A 1a4l_A* ... Back     alignment and structure
>2pgf_A Adenosine deaminase; metallo-dependent hydrolase, structural genomics, medical ST genomics of pathogenic protozoa consortium, MSGPP; HET: MSE ADN; 1.89A {Plasmodium vivax} PDB: 2pgr_A* 2qvn_A* 3ewc_A* 3ewd_A* 2amx_A Back     alignment and structure
>3lgd_A Adenosine deaminase CECR1; TIM barrel, dimerization and receptor binding domains, glyco hydrolase, growth factor, secreted; HET: NAG; 2.00A {Homo sapiens} PDB: 3lgg_A* Back     alignment and structure
>2a3l_A AMP deaminase, AMPD; atampd, AT2G38280, adenosine 5'-monophosphate deaminase, COF 5'-phosphate, structural genomics; HET: CF5; 3.34A {Arabidopsis thaliana} SCOP: c.1.9.1 Back     alignment and structure
>4dyk_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO PSI-biology, NEW YORK structural genomics research consorti hydrolase; 2.00A {Pseudomonas aeruginosa} Back     alignment and structure
>3ls9_A Triazine hydrolase; atrazine chlorohydrolase TRZN; 1.40A {Arthrobacter aurescens} PDB: 3lsc_A* 3lsb_A* Back     alignment and structure
>4f0r_A 5-methylthioadenosine/S-adenosylhomocysteine DEAM; structural genomics, PSI-biology; HET: MSE MTA; 1.80A {Chromobacterium violaceum} PDB: 4f0s_A* Back     alignment and structure
>4dzh_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO YORK structural genomics research consortium; 1.55A {Xanthomonas campestris PV} Back     alignment and structure
>3lnp_A Amidohydrolase family protein OLEI01672_1_465; TIM barrel, beta-fold, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Oleispira antarctica} Back     alignment and structure
>3mdu_A N-formimino-L-glutamate iminohydrolase; amonohydralase family, N-formimino-L-glutamate iminohydrolas guanidino-L-glutamate; HET: NGQ; 1.40A {Pseudomonas aeruginosa} PDB: 3mdw_A* Back     alignment and structure
>1ra0_A Cytosine deaminase; alpha-beta barrel, hexamer, conformation change, D314G mutant, hydrolase; 1.12A {Escherichia coli} SCOP: b.92.1.2 c.1.9.5 PDB: 1r9x_A 1ra5_A 1r9y_A 1r9z_A 1rak_A 3r0d_A* 3o7u_A* 3rn6_A* 1k6w_A 1k70_A 3g77_A Back     alignment and structure
>4aql_A Guanine deaminase; hydrolase, purine metabolism; HET: TXC; 1.99A {Homo sapiens} PDB: 2uz9_A* 3e0l_A Back     alignment and structure
>3v7p_A Amidohydrolase family protein; iron binding site, enzyme functio initiative, EFI; HET: TLA; 1.35A {Nitratiruptor SP} Back     alignment and structure
>2qt3_A N-isopropylammelide isopropyl amidohydrolase; N-isopropylammelide isopropylaminohydrolase ATZC, structural genomics, NYSGXRC, target 9364B; 2.24A {Pseudomonas SP} Back     alignment and structure
>4f0l_A Amidohydrolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Brucella melitensis biovar abortus} Back     alignment and structure
>1p1m_A Hypothetical protein TM0936; putative metal dependent hydrolase, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: b.92.1.4 c.1.9.9 PDB: 2plm_A* 1j6p_A Back     alignment and structure
>2paj_A Putative cytosine/guanine deaminase; NYSGXRC, PSI-II, amidohydrolase, sargasso SEA, enviro sample, structural genomics; 2.70A {Unidentified} SCOP: b.92.1.4 c.1.9.9 Back     alignment and structure
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis} Back     alignment and structure
>3cjp_A Predicted amidohydrolase, dihydroorotase family; structural genomics, protein structure initiative; 1.85A {Clostridium acetobutylicum atcc 824} Back     alignment and structure
>2i9u_A Cytosine/guanine deaminase related protein; protein structure initiative II (PSI-II), amidohydrol guanine deaminase; HET: GUN; 2.05A {Clostridium acetobutylicum} SCOP: b.92.1.4 c.1.9.9 Back     alignment and structure
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A* Back     alignment and structure
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa} Back     alignment and structure
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp} Back     alignment and structure
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A Back     alignment and structure
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A* Back     alignment and structure
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 238
d1a4ma_ 349 c.1.9.1 (A:) Adenosine deaminase (ADA) {Mouse (Mus 7e-27
d2amxa1 357 c.1.9.1 (A:20-376) Adenosine deaminase (ADA) {Plas 2e-22
d2a3la1 628 c.1.9.1 (A:212-839) AMP deaminase (AMPD), catalyti 4e-18
>d1a4ma_ c.1.9.1 (A:) Adenosine deaminase (ADA) {Mouse (Mus musculus) [TaxId: 10090]} Length = 349 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Adenosine/AMP deaminase
domain: Adenosine deaminase (ADA)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  103 bits (258), Expect = 7e-27
 Identities = 53/242 (21%), Positives = 94/242 (38%), Gaps = 30/242 (12%)

Query: 6   SMPKVELHAHLNGSIRDSTLLELARVLGEKGV-IVFSDVEHVI----MKSDRSLHEVFKL 60
           + PKVELH HL+G+I+  T+L   +   ++G+ +    VE +     M    SL      
Sbjct: 5   NKPKVELHVHLDGAIKPETILYFGK---KRGIALPADTVEELRNIIGMDKPLSLPGFLAK 61

Query: 61  FDL-IHVLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEG 119
           FD  + V+      + RI  E VE  A E +VY+E+R +P    +  +    + +     
Sbjct: 62  FDYYMPVIAGCREAIKRIAYEFVEMKAKEGVVYVEVRYSPHLLANSKVDPMPW-NQTEGD 120

Query: 120 LRAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETV 179
           +     VD+                 +N                +    R     ++E +
Sbjct: 121 VTPDDVVDL-----------------VNQGLQEGEQAFGIKVRSILCCMRHQPSWSLEVL 163

Query: 180 KLALEMRDLGVVGIDLSGNPTKG---EWTTFLPALKFAREQGLQITLHCGEVHMSFECLL 236
           +L  +     VV +DL+G+ T      +   + A + A + G+  T+H GEV        
Sbjct: 164 ELCKKYNQKTVVAMDLAGDETIEGSSLFPGHVEAYEGAVKNGIHRTVHAGEVGSPEVVRE 223

Query: 237 LL 238
            +
Sbjct: 224 AV 225
>d2amxa1 c.1.9.1 (A:20-376) Adenosine deaminase (ADA) {Plasmodium yoelii [TaxId: 5861]} Length = 357 Back     information, alignment and structure
>d2a3la1 c.1.9.1 (A:212-839) AMP deaminase (AMPD), catalytic domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 628 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query238
d1a4ma_ 349 Adenosine deaminase (ADA) {Mouse (Mus musculus) [T 100.0
d2amxa1 357 Adenosine deaminase (ADA) {Plasmodium yoelii [TaxI 100.0
d2a3la1 628 AMP deaminase (AMPD), catalytic domain {Thale cres 99.73
d2f6ka1 306 Putative amidohydrolase LP2961 {Lactobacillus plan 94.88
d1ra0a2 320 Cytosine deaminase catalytic domain {Escherichia c 92.89
d1m65a_244 Hypothetical protein YcdX {Escherichia coli [TaxId 88.79
d1p1ma2 281 Hypothetical protein TM0936, probable catalytic do 84.27
d2puza2 301 Imidazolonepropionase {Agrobacterium tumefaciens [ 83.52
d2dvta1 325 Thermophilic reversible gamma-resorcylate decarbox 83.14
d2hbva1 331 2-amino-3-carboxymuconate 6-semialdehyde decarboxy 82.71
>d1a4ma_ c.1.9.1 (A:) Adenosine deaminase (ADA) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Adenosine/AMP deaminase
domain: Adenosine deaminase (ADA)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.7e-41  Score=303.68  Aligned_cols=200  Identities=29%  Similarity=0.377  Sum_probs=171.0

Q ss_pred             cCChhhhccccCCCCCHHHHHHHHHHhccCCCCCc-hhhhHH---Hh-cCCCCHHHHHHHhHHHHhhc-CChHHHHHHHH
Q 026472            6 SMPKVELHAHLNGSIRDSTLLELARVLGEKGVIVF-SDVEHV---IM-KSDRSLHEVFKLFDLIHVLT-TDHATVTRITQ   79 (238)
Q Consensus         6 ~lPK~eLH~HL~Gsi~~~tl~~la~~~~~~~~~~~-~~~~~~---~~-~~~~~l~~f~~~f~~~~~l~-~~~~~~~~~~~   79 (238)
                      +|||+|||+||+||++++||++|+++   +|+.++ .+++.+   .. ..+.+|.+|++.|+.+..++ .++++++++++
T Consensus         5 ~lPK~eLH~HL~Gsi~~~~l~~la~~---~~~~lp~~~~~~~~~~~~~~~~~~l~~f~~~f~~~~~~~~~~~e~~~~~~~   81 (349)
T d1a4ma_           5 NKPKVELHVHLDGAIKPETILYFGKK---RGIALPADTVEELRNIIGMDKPLSLPGFLAKFDYYMPVIAGCREAIKRIAY   81 (349)
T ss_dssp             CSCEEEEEEEGGGSCCHHHHHHHHHH---HTCCCSCSSHHHHHHHHCCCSCCCHHHHHTTHHHHHHHHTTCHHHHHHHHH
T ss_pred             CCcHHHHhcCCcCCCCHHHHHHHHHH---cCCCCCCCCHHHHHHHhccCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence            79999999999999999999999995   666542 244433   22 35679999999999766665 57899999999


Q ss_pred             HHHHHHHhcCCeEEEEeecCCCCc------------cCCCCHHHHHHHHHHHHHhhhhcccccccccccccccccccccc
Q 026472           80 EVVEDFASENIVYLELRTTPKRNE------------SIGMSKRSYMDAVVEGLRAVSAVDVDFASRSIDVRRPVNTKNMN  147 (238)
Q Consensus        80 ~~~~~~a~dgV~Y~Elr~~P~~~~------------~~~~~~~~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (238)
                      ++++++++|||+|+|+|++|....            .++++.+++++++.++++++.                       
T Consensus        82 ~~~~~~~~dnv~y~Elr~~P~~~~~~~~~~~~~~~~~~~l~~~~vv~~i~~~~~~~~-----------------------  138 (349)
T d1a4ma_          82 EFVEMKAKEGVVYVEVRYSPHLLANSKVDPMPWNQTEGDVTPDDVVDLVNQGLQEGE-----------------------  138 (349)
T ss_dssp             HHHHHHHHTTEEEEEEEECSGGGCCSSCSSCGGGCCCCSCCHHHHHHHHHHHHHHHH-----------------------
T ss_pred             HHHHHHHhcCeeEEEEEeChhhhcccccccchhhhhhcCCCHHHHHHHHHHHHHHhc-----------------------
Confidence            999999999999999999997532            347899999999999998765                       


Q ss_pred             ccccCCCCCCcEEEEEEEEeCCCCHHHHHHHHHHHHhcCCCcEEEEeccCCCCCCCcc---cHHHHHHHHHHcCCCeeEe
Q 026472          148 DACNGTRGKKIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWT---TFLPALKFAREQGLQITLH  224 (238)
Q Consensus       148 ~~~~~~~~~~i~vrlI~~~~R~~~~e~~~~~~~la~~~~~~~vvG~dL~G~E~~~~~~---~f~~~f~~ar~~gl~~t~H  224 (238)
                            ..+++.+++|+++.|+.+ +++.+.+.++.++.+++||||||+|+|..+++.   .|.++|+.||+.|+++|+|
T Consensus       139 ------~~~~~~~~~i~~~~r~~~-~~~~e~~~~~~~~~~~~vvGidl~G~E~~~~~~~~~~~~~~f~~ar~~gl~~t~H  211 (349)
T d1a4ma_         139 ------QAFGIKVRSILCCMRHQP-SWSLEVLELCKKYNQKTVVAMDLAGDETIEGSSLFPGHVEAYEGAVKNGIHRTVH  211 (349)
T ss_dssp             ------HHHCCEEEEEEEEETTCG-GGHHHHHHHHHHTBTTTEEEEEEESCTTSTTGGGCHHHHHHHHHHHHHTCEEEEE
T ss_pred             ------ccCCceEEEEEEEeccch-hhHHHHHHHHHHhcccccccceecCccCCCChhhHHHHHHHHHHHHHcCCceeec
Confidence                  346899999999999854 567788899999988899999999999987654   5899999999999999999


Q ss_pred             cCCCCChhHHHhhC
Q 026472          225 CGEVHMSFECLLLL  238 (238)
Q Consensus       225 AGE~~~~~~i~~~~  238 (238)
                      |||+.+|++|++++
T Consensus       212 aGE~~~~~~i~~ai  225 (349)
T d1a4ma_         212 AGEVGSPEVVREAV  225 (349)
T ss_dssp             ESSSSCHHHHHHHH
T ss_pred             cCCCCChHHHHHHH
Confidence            99999999998863
>d2amxa1 c.1.9.1 (A:20-376) Adenosine deaminase (ADA) {Plasmodium yoelii [TaxId: 5861]} Back     information, alignment and structure
>d2a3la1 c.1.9.1 (A:212-839) AMP deaminase (AMPD), catalytic domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d2f6ka1 c.1.9.15 (A:2-307) Putative amidohydrolase LP2961 {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
>d1ra0a2 c.1.9.5 (A:56-375) Cytosine deaminase catalytic domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1m65a_ c.6.3.1 (A:) Hypothetical protein YcdX {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1p1ma2 c.1.9.9 (A:50-330) Hypothetical protein TM0936, probable catalytic domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2puza2 c.1.9.17 (A:80-380) Imidazolonepropionase {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
>d2dvta1 c.1.9.15 (A:1-325) Thermophilic reversible gamma-resorcylate decarboxylase {Rhizobium sp. MTP-10005 [TaxId: 267998]} Back     information, alignment and structure
>d2hbva1 c.1.9.15 (A:3-333) 2-amino-3-carboxymuconate 6-semialdehyde decarboxylase NbaD {Pseudomonas fluorescens [TaxId: 294]} Back     information, alignment and structure