Citrus Sinensis ID: 026548


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------
MNEEMSGDATDHRHQQQENMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCSC
ccccccccccccccccccccccccccEEEEEEEEccccccHHHHHHHHHcccccccccccccEEEEEEEEEEccEEEEEEEEcccccHHHHHHHHHHHHccccEEEEEEcccccHHHHHHHHHHHHHHHcccccEEEEEEEcccccccccccHHHHHHHHHHccccEEEccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccEEEccccccccccccccccccc
*********************PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKE****************************************
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MNEEMSGDATDHRHQQQENMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCSC

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
GTP-binding protein ypt3 Has a role in retrograde traffricking of proteins from the endosome to the Golgi. Involved in the secretory pathway where it has a role in acid phosphatase secretion.probableP17610
Ras-related protein RABA3 Intracellular vesicle trafficking and protein transport.probableQ9LNK1
Ras-related protein Rab-11B GTPase that modulates endosomal trafficking. Acts as a major regulator of membrane delivery during cytokinesis.probableQ3MHP2

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 2O52, chain A
Confidence level:very confident
Coverage over the Query: 25-50,63-197
View the alignment between query and template
View the model in PyMOL
Template: 2HJG, chain A
Confidence level:confident
Coverage over the Query: 26-219
View the alignment between query and template
View the model in PyMOL