Citrus Sinensis ID: 026553

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------
Protein Sequence
MASSLTKRLDTLNPWLRLAQLRFARTESGPPRRRSKSPSFSMTKPNKEKSEWWIVDGEMHEIGDHVPPRERFVIPRDNIPNKRRKQLREQFMRRTRLVLKDSEHEVFCKRYMELYQELRENWERLYWDEGYSKKLAKDHANYDSAEEDDQDFNPYRSGRKPHGGDQTRDQGFPSYNQGDSWEKVHQIKDKFEYDRERRMKDKAFAPMNGGTYSGSHDSNFRNQPFDTQRHFPNNERN
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccEEEEcccccccccccccccccccccccccHHHHHHHHHHHHHHccEEccccccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHccccHHHHHHHHHHccccccccccccccccccccccccccccEEEEcccEEEcccccccccEEEEcccccccHHHHHHHHHHHHHccEEEccccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHcccccccHccccccccccccccccccccccccccccccccccHHHHHHHHHHccHcHHHHHHHHHcccccccccccccccccccccccccHcccccccc
Coil and Loop (DISEMBL)
MASSLTKRLDTLNPWLRLAQLRFArtesgpprrrskspsfsmtkpnkeksewwivdgemheigdhvpprerfviprdnipnkRRKQLREQFMRRTRLVLKDSEHEVFCKRYMELYQELRENWERLYWdegyskklakdhanydsaeeddqdfnpyrsgrkphggdqtrdqgfpsynqgdswekVHQIKDKFEYDRERRMkdkafapmnggtysgshdsnfrnqpfdtqrhfpnnern
Flexible Loop (DISEMBL)
massltkrldtlnpwLRLAQLrfartesgpprrrskspsfsmtkpnkeksewWIVDGEMHEigdhvpprerfviprdnipnkrrkqlreqfmrrtrlvlkdsehevFCKRYMELYQELRENWERLYWDEGYSKKLAKDHANydsaeeddqdfnpyrsgrkphggdqtrdqgfpsynqgdswekvhQIKDKFEYDRERRMKDKafapmnggtysgshdsnfrnqpfdtqrhfpnnern
Low Complexity Region (SEG)
MASSLTKRLDTLNPWLRLAQLRFARTEsgpprrrskspsfsMTKPNKEKSEWWIVDGEMHEIGDHVPPRERFVIPRDNIPNKRRKQLREQFMRRTRLVLKDSEHEVFCKRYMELYQELRENWERLYWDEGYSKKLAKDHANYDSAEEDDQDFNPYRSGRKPHGGDQTRDQGFPSYNQGDSWEKVHQIKDKFEYDRERRMKDKAFAPMNGGTYSGSHDSNFRNQPFDTQRHFPNNERN
Disordered region (IsUnstruct)
**********TLNPWLRLAQLRF****************************WWIVDGEMHEIGDHVP**ERFVI****************FMRRTRLVLKDSEHEVFCKRYMELYQELRENWERLYWDEGYSK********************************************************************************************************
Disordered Region (DISOPRED)
*********DTLNPWLRLAQL******************************WWIVDGEMHEIGDHVPPRERFVI****************FMRRTRLVLKDSEHEVFCKRYMELYQELRENWERLYWDEGYSKKLA********************************************WEKVHQIKDKFEYDRERRMKDK**********************F************
Disordered Region (DISEMBL)
MASSLTKRLDTLNPWLRLAQLRFAR**********************EKSEWWIVDGEMHEIGDHVPPRERFVIPRDNIPNKRRKQLREQFMRRTRLVLKDSEHEVFCKRYMELYQELRENWERLYWDEGYSKKLAKDHANYDSAEEDDQDFNPYRSGR********RDQGFPSYNQGDSWEKVHQIKDKFEYDRERRMKDKAFAPMNGGTYSGSHDSNFRNQPFDTQRHFPNNERN
Disordered Region (DISPRO)
********LDTLNPWLRLAQLRFAR***********************KSEWWIVDGEMHEIGDHVPPRERFVIPRDNIPNKRRKQLREQFMRRTRLVLKDSEHEVFCKRYMELYQELRENWERLYWDEGYSKKLAKDHANYD*******D****************************SWEKVHQIKDKFEYDRERRMKDKA**********************************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASSLTKRLDTLNPWLRLAQLRFARTESGPPRRRSKSPSFSMTKPNKEKSEWWIVDGEMHEIGDHVPPRERFVIPRDNIPNKRRKQLREQFMRRTRLVLKDSEHEVFCKRYMELYQELRENWERLYWDEGYSKKLAKDHANYDSAEEDDQDFNPYRSGRKPHGGDQTRDQGFPSYNQGDSWEKVHQIKDKFEYDRERRMKDKAFAPMNGGTYSGSHDSNFRNQPFDTQRHFPNNERN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	237
224065449	233	predicted protein [Populus trichocarpa]	0.953	0.969	0.721	5e-88
255572630	229	conserved hypothetical protein [Ricinus	0.919	0.951	0.734	5e-86
297829294	235	hypothetical protein ARALYDRAFT_896908 [	0.936	0.944	0.696	2e-84
15231465	235	uncharacterized protein [Arabidopsis tha	0.936	0.944	0.696	4e-83
147845024	266	hypothetical protein VITISV_026468 [Viti	0.962	0.857	0.636	2e-82
357513169	242	hypothetical protein MTR_8g011480 [Medic	0.970	0.950	0.644	4e-77
356504426	230	PREDICTED: uncharacterized protein LOC10	0.949	0.978	0.637	2e-76
145359014	195	uncharacterized protein [Arabidopsis tha	0.801	0.974	0.706	4e-71
26452083	195	unknown protein [Arabidopsis thaliana]	0.801	0.974	0.701	2e-70
47848233	553	unknown protein [Oryza sativa Japonica G	0.738	0.316	0.721	2e-69

>gi|224065449|ref|XP_002301822.1| predicted protein [Populus trichocarpa] gi|222843548|gb|EEE81095.1| predicted protein [Populus trichocarpa]

 Score =  329 bits (844), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 168/233 (72%), Positives = 194/233 (83%), Gaps = 7/233 (3%)

Query: 3   SSLTKRLDTLNPWLRLA--QLRFARTESGPPRRRSKSPSFSMTKPNKEKSEWWIVDGEMH 60
           SSL KRL  L+P L+    QLR  RT +GP RRRSKSP F+  K + EKS+WWIVDGEMH
Sbjct: 2   SSLVKRLHHLSPCLQSTAHQLRQLRTGAGPNRRRSKSPPFAAKKTD-EKSDWWIVDGEMH 60

Query: 61  EIGDHVPPRERFVIPRDNIPNKRRKQLREQFMRRTRLVLKDSEHEVFCKRYMELYQELRE 120
           EIG+HVPPRERFVIPRDN+PNKRRKQLREQFMRRTRLV+K+SEHE +CKRYMELYQELRE
Sbjct: 61  EIGEHVPPRERFVIPRDNVPNKRRKQLREQFMRRTRLVIKESEHEPWCKRYMELYQELRE 120

Query: 121 NWERLYWDEGYSKKLAKDHANYDSAEEDDQDFNPYRSGRKPHGGDQTRDQGFPSYNQGDS 180
           NWERLYWDEGYSKK+A+DHANY+SAE+DDQDFNPYRS R     +Q +DQ F    QGD+
Sbjct: 121 NWERLYWDEGYSKKIARDHANYESAEDDDQDFNPYRSKRP----EQVKDQDFGRNRQGDT 176

Query: 181 WEKVHQIKDKFEYDRERRMKDKAFAPMNGGTYSGSHDSNFRNQPFDTQRHFPN 233
           WEKV QI+DKFEYDRE+RM++KAFAPMN GT      SN +N+PFDTQR+FP+
Sbjct: 177 WEKVGQIRDKFEYDREKRMREKAFAPMNRGTSFELPHSNTQNRPFDTQRYFPD 229

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255572630|ref|XP_002527248.1| conserved hypothetical protein [Ricinus communis] gi|223533341|gb|EEF35092.1| conserved hypothetical protein [Ricinus communis]

 Score =  323 bits (827), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 166/226 (73%), Positives = 187/226 (82%), Gaps = 8/226 (3%)

Query: 7   KRLDTLNPWLRLAQLRFARTESGPPRRRSKSPSFSMTKPNKEKSEWWIVDGEMHEIGDHV 66
           K L TL+P LRLA   F RT++ P RRRSKSP+F   K + EKSEWWIVDGEMHEIGDHV
Sbjct: 8   KLLQTLSPRLRLAAKDF-RTDASPNRRRSKSPAFQAKKAD-EKSEWWIVDGEMHEIGDHV 65

Query: 67  PPRERFVIPRDNIPNKRRKQLREQFMRRTRLVLKDSEHEVFCKRYMELYQELRENWERLY 126
           PPRERFVIPRDNIPNKRRKQLREQFMRRTRLVLK+SEHE +CKRYMELYQELRENWERLY
Sbjct: 66  PPRERFVIPRDNIPNKRRKQLREQFMRRTRLVLKESEHEPWCKRYMELYQELRENWERLY 125

Query: 127 WDEGYSKKLAKDHANYDSAEEDDQDFNPYRSGRKPHGGDQTRDQGFPSYNQGDSWEKVHQ 186
           WDEGYSKK+A+DHANY+SAE+DDQDFNPYRS       +Q +DQG     QGD+WEKV Q
Sbjct: 126 WDEGYSKKIAQDHANYESAEDDDQDFNPYRS----RQSEQMKDQGPRRNRQGDTWEKVSQ 181

Query: 187 IKDKFEYDRERRMKDKAFAPMNGGTYSGSHDSNFRNQPFDTQRHFP 232
           I+DKFEYDRE+RM++KAFAPMN G      D NF+NQP D +R+FP
Sbjct: 182 IRDKFEYDREKRMREKAFAPMNRGM--ELPDPNFQNQPLDARRYFP 225

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297829294|ref|XP_002882529.1| hypothetical protein ARALYDRAFT_896908 [Arabidopsis lyrata subsp. lyrata] gi|297328369|gb|EFH58788.1| hypothetical protein ARALYDRAFT_896908 [Arabidopsis lyrata subsp. lyrata]

 Score =  317 bits (813), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 161/231 (69%), Positives = 189/231 (81%), Gaps = 9/231 (3%)

Query: 5   LTKRLDTLNPWLR---LAQLRFARTESGPPRRRSKSPSFSMTKPNKEKSEWWIVDGEMHE 61
           + +R+ ++ P +R   ++Q+R ARTE+G PRRR+K PS  + K  +EKSEWWIVDGEMHE
Sbjct: 4   VVRRVGSILPSIRHGAVSQIRLARTEAGQPRRRNKLPSLPLKK-KEEKSEWWIVDGEMHE 62

Query: 62  IGDHVPPRERFVIPRDNIPNKRRKQLREQFMRRTRLVLKDSEHEVFCKRYMELYQELREN 121
           IGDHVPPRERF IPRDNIPNKRRKQLREQFMRRTRLVLK+SEHE +CK+YMELY ELREN
Sbjct: 63  IGDHVPPRERFTIPRDNIPNKRRKQLREQFMRRTRLVLKESEHEPWCKKYMELYNELREN 122

Query: 122 WERLYWDEGYSKKLAKDHANYDSAEEDDQDFNPYRSGRKPHGGDQTRDQGFPSYNQGDSW 181
           WERLYWDEGYSKK+A DHANY+SAEEDD+DFNPYR+ R     DQT++QGF    QGD+W
Sbjct: 123 WERLYWDEGYSKKIASDHANYESAEEDDEDFNPYRNRRS--YSDQTKEQGFNRTTQGDNW 180

Query: 182 EKVHQIKDKFEYDRERRMKDKAFAPMNGGTYSG-SHDSNFRNQ--PFDTQR 229
           EKV+QI+DKFEYDRERRM+DKAFAPMN    S  S D N+  Q  PFD +R
Sbjct: 181 EKVNQIRDKFEYDRERRMRDKAFAPMNAAPASQESRDLNWNAQRRPFDAER 231

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15231465|ref|NP_187400.1| uncharacterized protein [Arabidopsis thaliana] gi|6041842|gb|AAF02151.1|AC009853_11 unknown protein [Arabidopsis thaliana] gi|27754318|gb|AAO22612.1| unknown protein [Arabidopsis thaliana] gi|28393879|gb|AAO42347.1| unknown protein [Arabidopsis thaliana] gi|332641022|gb|AEE74543.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  313 bits (802), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 161/231 (69%), Positives = 187/231 (80%), Gaps = 9/231 (3%)

Query: 5   LTKRLDTLNPWLR---LAQLRFARTESGPPRRRSKSPSFSMTKPNKEKSEWWIVDGEMHE 61
           + +R+ ++ P +R   ++Q+R ARTE+G PRRR+K PS  + K  +EKSEWWIVDGEMHE
Sbjct: 4   VVRRVGSILPSIRHGGVSQIRLARTEAGQPRRRNKLPSLPLKK-KEEKSEWWIVDGEMHE 62

Query: 62  IGDHVPPRERFVIPRDNIPNKRRKQLREQFMRRTRLVLKDSEHEVFCKRYMELYQELREN 121
           IGDHVPPRERF IPRDNIPNKRRKQLR+QFMRRTRLVLK+SEHE +CK+YMELY ELREN
Sbjct: 63  IGDHVPPRERFTIPRDNIPNKRRKQLRDQFMRRTRLVLKESEHEPWCKKYMELYNELREN 122

Query: 122 WERLYWDEGYSKKLAKDHANYDSAEEDDQDFNPYRSGRKPHGGDQTRDQGFPSYNQGDSW 181
           WERLYWDEGYSKKLA DHANY+SAEEDD+DFNPYR+ R     DQT++QGF    QGD+W
Sbjct: 123 WERLYWDEGYSKKLASDHANYESAEEDDEDFNPYRNRRS--FSDQTKEQGFNRTTQGDNW 180

Query: 182 EKVHQIKDKFEYDRERRMKDKAFAPMNGGTYSG-SHDSNFRNQ--PFDTQR 229
           EKV QI+DKFEYDRERRM+DKAFAPMN    S  S D N+  Q  PFD  R
Sbjct: 181 EKVSQIRDKFEYDRERRMRDKAFAPMNAAPESQESRDLNWNAQRRPFDPDR 231

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147845024|emb|CAN82702.1| hypothetical protein VITISV_026468 [Vitis vinifera]

 Score =  310 bits (795), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 168/264 (63%), Positives = 191/264 (72%), Gaps = 36/264 (13%)

Query: 5   LTKRLDTLNPWLR--LAQLRFARTESGPP---RRRSKSPSFSMTKPNKEKSEWWIVDGEM 59
           L++RL    P LR  L QLRFART+SG P   RRRSK P+ +M K + EKSEWW+VDGEM
Sbjct: 4   LSRRLQASTPCLRSALLQLRFARTDSGSPVRPRRRSKFPASTMRKVD-EKSEWWVVDGEM 62

Query: 60  HEIGDHVPPRERFVIPRDNIPNKRRKQLREQFMRRTRLVLKDSEHEVFCKRYMELYQELR 119
           HEIGD+VPPRERFVIPRDNIPNKRRKQLREQFMRRTRLVLK+SEHE +CKRYMELYQELR
Sbjct: 63  HEIGDNVPPRERFVIPRDNIPNKRRKQLREQFMRRTRLVLKESEHEPWCKRYMELYQELR 122

Query: 120 ENWERLYWDEGYSKKLAKDHANYDSAEEDDQDFNPYRSGRKPHGGDQTRDQGFPSYNQGD 179
           ENWERLYWDEGYSKKLA+DHANY+SAE+DD DF+PYR  R+     Q + Q     +QGD
Sbjct: 123 ENWERLYWDEGYSKKLAQDHANYESAEDDDLDFSPYR--RRWTHDKQIKGQELARNSQGD 180

Query: 180 SWEKVHQIKDKFEYDRERRMKDK----------------------------AFAPMNGGT 211
           SWE+V QI+DKFEYDRERRM++K                            AFAPM GG 
Sbjct: 181 SWERVSQIRDKFEYDRERRMREKVGSHPFMVSLSEIWFVVDIFLTPSYSLAAFAPMTGGM 240

Query: 212 YSGSHDSNFRNQPFDTQRHFPNNE 235
             GSH S  RNQ FD QR+F  +E
Sbjct: 241 APGSHQSVSRNQRFDAQRYFSQSE 264

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357513169|ref|XP_003626873.1| hypothetical protein MTR_8g011480 [Medicago truncatula] gi|355520895|gb|AET01349.1| hypothetical protein MTR_8g011480 [Medicago truncatula]

 Score =  293 bits (750), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 152/236 (64%), Positives = 182/236 (77%), Gaps = 6/236 (2%)

Query: 4   SLTKRLDTLNPWLRLAQLRFARTESGPP---RRRSKSPSFSMTKPNKEKSEWWIVDGEMH 60
           SLTKRL +L P+L     +        P   RRR KS    + KP +E+SEWWIVDGEMH
Sbjct: 3   SLTKRLSSLTPFLSRTSHQLRSPPQPSPTHSRRRPKSTPLPLKKP-EERSEWWIVDGEMH 61

Query: 61  EIGDHVPPRERFVIPRDNIPNKRRKQLREQFMRRTRLVLKDSEHEVFCKRYMELYQELRE 120
           EIGDHVPPRERFVIPR+NIPNKRRKQLREQFMRRTRLVLK+SEH+ +CKRYMELY ELRE
Sbjct: 62  EIGDHVPPRERFVIPRENIPNKRRKQLREQFMRRTRLVLKESEHDPWCKRYMELYNELRE 121

Query: 121 NWERLYWDEGYSKKLAKDHANYDSAEEDDQDFNPYRSGRKPHGGDQTRDQGFPSYNQGDS 180
           NWERLYWDEG+S KLA+DHANY+SAE+DD+DF+PYR  R+P   +  +D  F    + D+
Sbjct: 122 NWERLYWDEGFSNKLARDHANYESAEDDDEDFSPYR-NRRPQ-MEYNKDLNFVRDRKSDT 179

Query: 181 WEKVHQIKDKFEYDRERRMKDKAFAPMNGGTYSGSHDSNFRNQPFDTQRHFPNNER 236
            EKV+ I+DKFEYDRERRM++KAFAPM+GG+ + SHDS   NQP +T R+F   ER
Sbjct: 180 LEKVNLIRDKFEYDRERRMREKAFAPMHGGSVADSHDSEGWNQPLNTDRYFSQTER 235

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356504426|ref|XP_003520997.1| PREDICTED: uncharacterized protein LOC100798650 [Glycine max]

 Score =  291 bits (744), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 151/237 (63%), Positives = 184/237 (77%), Gaps = 12/237 (5%)

Query: 4   SLTKRLDT---LNPWLRLAQLRFARTESGPPRRRSKSPSFSMTKPNKEKSEWWIVDGEMH 60
           SL KRL       P+L L QLR+ART       R KSP  ++ +  +E+SEWW VDGE+H
Sbjct: 3   SLAKRLQVQPLTTPFL-LGQLRWART-------RPKSPPVALKRA-EERSEWWAVDGEVH 53

Query: 61  EIGDHVPPRERFVIPRDNIPNKRRKQLREQFMRRTRLVLKDSEHEVFCKRYMELYQELRE 120
           EIGD VP RERFVIPR+NIPNKRRKQLREQFMRRTRLVLK+SEH+ +CK+YMELY ELRE
Sbjct: 54  EIGDLVPLRERFVIPRENIPNKRRKQLREQFMRRTRLVLKESEHDPWCKKYMELYNELRE 113

Query: 121 NWERLYWDEGYSKKLAKDHANYDSAEEDDQDFNPYRSGRKPHGGDQTRDQGFPSYNQGDS 180
           NWERLYWDEGY+KKLA+DHANY+SAE+DD DF+PYRS R     + ++DQ F    Q D+
Sbjct: 114 NWERLYWDEGYTKKLAQDHANYESAEDDDGDFSPYRSRRPQSQMEHSKDQNFGRNRQSDN 173

Query: 181 WEKVHQIKDKFEYDRERRMKDKAFAPMNGGTYSGSHDSNFRNQPFDTQRHFPNNERN 237
           WEKV+ ++DKFEYDRERRM++KAFAPM+GG+   SHDS+  NQP +T R+F   ER+
Sbjct: 174 WEKVNLLRDKFEYDRERRMREKAFAPMHGGSVPDSHDSDRWNQPLNTDRYFSQTERH 230

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|145359014|ref|NP_199664.2| uncharacterized protein [Arabidopsis thaliana] gi|332008299|gb|AED95682.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  273 bits (698), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 137/194 (70%), Positives = 160/194 (82%), Gaps = 4/194 (2%)

Query: 4   SLTKRLDTLNPWLR--LAQLRFARTESGPPRRRSKSPSFSMTKPNKEKSEWWIVDGEMHE 61
           S+ +RL +  P L+   + LRF RTE+  PRRR+K PS S  K  +EKSEWWIVDGEMHE
Sbjct: 3   SVARRLGSATPSLQNGASLLRFMRTEASQPRRRNKFPSLSPLKKKEEKSEWWIVDGEMHE 62

Query: 62  IGDHVPPRERFVIPRDNIPNKRRKQLREQFMRRTRLVLKDSEHEVFCKRYMELYQELREN 121
           IGDHVP RERF IPRDNIPNKRRKQLREQFMRRTRLVLK+SEHE +CK+YMELY E+REN
Sbjct: 63  IGDHVPLRERFTIPRDNIPNKRRKQLREQFMRRTRLVLKESEHEPWCKKYMELYNEVREN 122

Query: 122 WERLYWDEGYSKKLAKDHANYDSAEEDDQDFNPYRSGRKPHGGDQTRDQGFPSYNQG-DS 180
           WERLYWDEGYSKK+A+DHANY+SAEEDD+DFNPYR+ R+P+     ++QGF    QG D+
Sbjct: 123 WERLYWDEGYSKKIARDHANYESAEEDDEDFNPYRN-RRPYNDSIKQEQGFNRTTQGDDN 181

Query: 181 WEKVHQIKDKFEYD 194
           WEKV QI+DKFEYD
Sbjct: 182 WEKVSQIRDKFEYD 195

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|26452083|dbj|BAC43131.1| unknown protein [Arabidopsis thaliana]

 Score =  271 bits (692), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 136/194 (70%), Positives = 159/194 (81%), Gaps = 4/194 (2%)

Query: 4   SLTKRLDTLNPWLR--LAQLRFARTESGPPRRRSKSPSFSMTKPNKEKSEWWIVDGEMHE 61
           S+ +RL +  P L+   + LRF RTE+  PRRR+K PS S  K  +EKSEWWIVDGEMHE
Sbjct: 3   SVARRLGSATPSLQNGASLLRFMRTEASQPRRRNKFPSLSPLKKKEEKSEWWIVDGEMHE 62

Query: 62  IGDHVPPRERFVIPRDNIPNKRRKQLREQFMRRTRLVLKDSEHEVFCKRYMELYQELREN 121
           IGDHVP RERF IPRDNIPNKRRKQLREQFMRRTRLVLK+SEHE +CK+YMELY E+REN
Sbjct: 63  IGDHVPLRERFTIPRDNIPNKRRKQLREQFMRRTRLVLKESEHEPWCKKYMELYNEVREN 122

Query: 122 WERLYWDEGYSKKLAKDHANYDSAEEDDQDFNPYRSGRKPHGGDQTRDQGFPSYNQG-DS 180
           WERLYWDEGYSKK+A+DHANY+SAEEDD+DFNPYR+ R+P+     ++QGF    QG D+
Sbjct: 123 WERLYWDEGYSKKIARDHANYESAEEDDEDFNPYRN-RRPYNDSIKQEQGFNRTTQGDDN 181

Query: 181 WEKVHQIKDKFEYD 194
           WEKV QI+ KFEYD
Sbjct: 182 WEKVSQIRGKFEYD 195

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|47848233|dbj|BAD22058.1| unknown protein [Oryza sativa Japonica Group]

 Score =  267 bits (683), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 127/176 (72%), Positives = 150/176 (85%), Gaps = 1/176 (0%)

Query: 48  EKSEWWIVDGEMHEIGDHVPPRERFVIPRDNIPNKRRKQLREQFMRRTRLVLKDSEHEVF 107
           +KSEWW VDGEMHEIG+ VP RERF IPRDN+PN+RRKQ+REQFMRRTRLVLKD+EHE +
Sbjct: 296 KKSEWWAVDGEMHEIGEGVPHRERFAIPRDNLPNRRRKQMREQFMRRTRLVLKDTEHEAW 355

Query: 108 CKRYMELYQELRENWERLYWDEGYSKKLAKDHANYDSAEEDDQDFNPYRSGRKPHGGDQT 167
           CK+YMELYQELRENWERLYWDEGYSKK+A+DHANYDSAEEDD DF+PY S R+    +  
Sbjct: 356 CKKYMELYQELRENWERLYWDEGYSKKIAEDHANYDSAEEDDLDFSPY-SRRRHTNVEPN 414

Query: 168 RDQGFPSYNQGDSWEKVHQIKDKFEYDRERRMKDKAFAPMNGGTYSGSHDSNFRNQ 223
           +D GF +  QG++WE+V QI+DKFEYDRERRM+++AFAPMN     G HDS FRN+
Sbjct: 415 KDIGFTASKQGETWERVTQIRDKFEYDRERRMRERAFAPMNMENNFGQHDSRFRNR 470

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	237
TAIR|locus:2079671	235	AT3G07440 "AT3G07440" [Arabido	0.936	0.944	0.662	3.8e-78
TAIR|locus:2166081	195	AT5G48530 "AT5G48530" [Arabido	0.801	0.974	0.664	5.1e-67
UNIPROTKB|F1P661	526	PPIL4 "Uncharacterized protein	0.561	0.252	0.260	0.00016
UNIPROTKB|F1N6W2	492	PPIL4 "Uncharacterized protein	0.561	0.270	0.273	0.00072
UNIPROTKB|I3LGX0	471	PPIL4 "Uncharacterized protein	0.561	0.282	0.253	0.00088

TAIR|locus:2079671 AT3G07440 "AT3G07440" [Arabidopsis thaliana (taxid:3702)]

 Score = 786 (281.7 bits), Expect = 3.8e-78, P = 3.8e-78
 Identities = 153/231 (66%), Positives = 177/231 (76%)

Query:     5 LTKRLDTLNPWLR---LAQLRFARTEXXXXXXXXXXXXXXMTKPNKEKSEWWIVDGEMHE 61
             + +R+ ++ P +R   ++Q+R ARTE              + K  +EKSEWWIVDGEMHE
Sbjct:     4 VVRRVGSILPSIRHGGVSQIRLARTEAGQPRRRNKLPSLPLKK-KEEKSEWWIVDGEMHE 62

Query:    62 IGDHVPPRERFVIPRDNIPNKRRKQLREQFMRRTRLVLKDSEHEVFCKRYMELYQELREN 121
             IGDHVPPRERF IPRDNIPNKRRKQLR+QFMRRTRLVLK+SEHE +CK+YMELY ELREN
Sbjct:    63 IGDHVPPRERFTIPRDNIPNKRRKQLRDQFMRRTRLVLKESEHEPWCKKYMELYNELREN 122

Query:   122 WERLYWDEGYSKKLAKDHANYDSAEEDDQDFNPYRSGRKPHGGDQTRDQGFPSYNQGDSW 181
             WERLYWDEGYSKKLA DHANY+SAEEDD+DFNPYR+ R     DQT++QGF    QGD+W
Sbjct:   123 WERLYWDEGYSKKLASDHANYESAEEDDEDFNPYRNRRS--FSDQTKEQGFNRTTQGDNW 180

Query:   182 EKVHQIKDKFEYDRERRMKDKAFAPMNGGTYSG-SHDSNFRNQ--PFDTQR 229
             EKV QI+DKFEYDRERRM+DKAFAPMN    S  S D N+  Q  PFD  R
Sbjct:   181 EKVSQIRDKFEYDRERRMRDKAFAPMNAAPESQESRDLNWNAQRRPFDPDR 231

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2166081 AT5G48530 "AT5G48530" [Arabidopsis thaliana (taxid:3702)]

 Score = 681 (244.8 bits), Expect = 5.1e-67, P = 5.1e-67
 Identities = 129/194 (66%), Positives = 150/194 (77%)

Query:     4 SLTKRLDTLNPWLR--LAQLRFARTEXXXXXXXXXXXXXXMTKPNKEKSEWWIVDGEMHE 61
             S+ +RL +  P L+   + LRF RTE                K  +EKSEWWIVDGEMHE
Sbjct:     3 SVARRLGSATPSLQNGASLLRFMRTEASQPRRRNKFPSLSPLKKKEEKSEWWIVDGEMHE 62

Query:    62 IGDHVPPRERFVIPRDNIPNKRRKQLREQFMRRTRLVLKDSEHEVFCKRYMELYQELREN 121
             IGDHVP RERF IPRDNIPNKRRKQLREQFMRRTRLVLK+SEHE +CK+YMELY E+REN
Sbjct:    63 IGDHVPLRERFTIPRDNIPNKRRKQLREQFMRRTRLVLKESEHEPWCKKYMELYNEVREN 122

Query:   122 WERLYWDEGYSKKLAKDHANYDSAEEDDQDFNPYRSGRKPHGGDQTRDQGFPSYNQGD-S 180
             WERLYWDEGYSKK+A+DHANY+SAEEDD+DFNPYR+ R+P+     ++QGF    QGD +
Sbjct:   123 WERLYWDEGYSKKIARDHANYESAEEDDEDFNPYRN-RRPYNDSIKQEQGFNRTTQGDDN 181

Query:   181 WEKVHQIKDKFEYD 194
             WEKV QI+DKFEYD
Sbjct:   182 WEKVSQIRDKFEYD 195

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|F1P661 PPIL4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 118 (46.6 bits), Expect = 0.00016, P = 0.00016
 Identities = 38/146 (26%), Positives = 71/146 (48%)

Query:    85 KQLREQFMRRTRLVLKDSEHEVFCKRYMELYQELRENWERLYWDEGYSKKLAKDHANYDS 144
             K+  ++  + + LVLKD        +Y  +  E  E+ +  +    ++ K  K    + S
Sbjct:   371 KEYEKEQDKSSNLVLKDKVKPKQDAKYDLILDEQAEDSKSSH---SHTSKKHKKKTRHCS 427

Query:   145 AEEDDQDFNPYRSGRKPHGGDQTRDQGFPSYNQGDS-WEKVHQIKDKFEYDRERRMKDKA 203
              E++D+D+ P R+  +    D  R+ GF  Y + +S WEK  Q  +K   DR +  + ++
Sbjct:   428 EEKEDEDYMPIRNTNQ----DIYREMGFGHYEEEESCWEK--QKSEK--RDRPQN-RSRS 478

Query:   204 FAPMNGGTYSGSHDSNFRNQPFDTQR 229
              +    G YS SH S ++  P++ +R
Sbjct:   479 RSRERDGHYSNSHKSKYQTDPYERER 504

GO:0006457 "protein folding" evidence=IEA

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|F1N6W2 PPIL4 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 112 (44.5 bits), Expect = 0.00072, P = 0.00072
 Identities = 40/146 (27%), Positives = 70/146 (47%)

Query:    85 KQLREQFMRRTRLVLKDSEHEVFCKRYMELYQELRENWERLYWDEGYSKKLAKDHANYDS 144
             K+  ++  + + LVLKD        +Y EL   L E  E       ++ K  K    + S
Sbjct:   337 KEYEKEQDKPSNLVLKDKVKPKQDAKY-ELV--LDEQAEDSKAGHSHTSKKHKKKTRHCS 393

Query:   145 AEEDDQDFNPYRSGRKPHGGDQTRDQGFPSYNQGDS-WEKVHQIKDKFEYDRERRMKDKA 203
              E++D+D+ P ++  +    D  R+ GF  Y + +S WEK  Q  +K   DR +  + ++
Sbjct:   394 EEKEDEDYMPIKNTNQ----DIYREMGFGHYEEEESCWEK--QKSEK--RDRPQN-RSRS 444

Query:   204 FAPMNGGTYSGSHDSNFRNQPFDTQR 229
              +    G YS SH S ++  P++ +R
Sbjct:   445 RSRERDGHYSNSHKSKYQADPYERER 470

GO:0006457 "protein folding" evidence=IEA

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|I3LGX0 PPIL4 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 111 (44.1 bits), Expect = 0.00088, P = 0.00088
 Identities = 37/146 (25%), Positives = 70/146 (47%)

Query:    85 KQLREQFMRRTRLVLKDSEHEVFCKRYMELYQELRENWERLYWDEGYSKKLAKDHANYDS 144
             K+  ++  + + LVLKD        +Y  +  E  E+ +  +    ++ K  K    + S
Sbjct:   316 KEYEKEQDKPSNLVLKDKVKPKQSAKYDLVLDEQAEDSKSSH---SHTSKKHKKKTRHCS 372

Query:   145 AEEDDQDFNPYRSGRKPHGGDQTRDQGFPSYNQGDS-WEKVHQIKDKFEYDRERRMKDKA 203
              E++D+D+ P R+  +    D  R+ GF  Y + +S WEK  Q  +K   DR +  + ++
Sbjct:   373 EEKEDEDYMPIRNTNQ----DIYREMGFGHYEEEESCWEK--QKNEK--RDRPQN-RSRS 423

Query:   204 FAPMNGGTYSGSHDSNFRNQPFDTQR 229
              +    G YS SH   ++  P++ +R
Sbjct:   424 RSRERDGHYSNSHKPKYQPDPYERER 449


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.134   0.420    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      237       223   0.00098  112 3  11 22  0.42    33
                                                     32  0.40    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  611 (65 KB)
  Total size of DFA:  221 KB (2120 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  23.01u 0.12s 23.13t   Elapsed:  00:00:01
  Total cpu time:  23.01u 0.12s 23.13t   Elapsed:  00:00:01
  Start:  Fri May 10 19:17:58 2013   End:  Fri May 10 19:17:59 2013

GO:0006457 "protein folding" evidence=IEA

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00002558 hypothetical protein (233 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00