Citrus Sinensis ID: 026592

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230------
Protein Sequence
MYENVEKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLDAKVEEDQSCVDQLGKTGGYVEHANASDEQKLMVKFPRTCSLAHLVELEYFAPISQLLNDNTYNFNYDFQNGINNNAASDDQFENKLQPSDMHQVNHSDSLNQQSLFVNPTVYEFQ
Secondary Structure (PSIPRED)
ccccccccccccccEEEEcccccccccccccccccccccccccccccccccccEEEEEEEEEEEEccccccccccccEEEEEEcccccccccccccccccccEEEEEEEEcccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccHHHcccccEEEEEcccccccccccccccccccccEEEccccccEcccccEEEEEEEEEEEcccccccccccEEEEEEEEccccccccccccccccccEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcc
Coil and Loop (DISEMBL)
MYENVEKaefgekewyffsprdrkypngtrpnratvsgywkatgtdkaiyggskyLGVKKALVFykgrppkgiktdwimheyrlndptrqpykhngsmkldDWVLCRIykkrqtgsrsvldakveeDQSCVDqlgktggyvehanasdeqklmvkfprtcslAHLVELeyfapisqllndntynfnydfqnginnnaasddqfenklqpsdmhqvnhsdslnqqslfvnptvyefq
Flexible Loop (DISEMBL)
myenvekaefgekewyffsprdrkypngtrpnratvsgywkatgtdkaiyggskYLGVKKALVFYKgrppkgiktdwiMHEYRLndptrqpykhngsmklddWVLCRIYKKrqtgsrsvldakveEDQSCVDQLGKTGGYVEHANASDEQKLMVKFPRTCSLAHLVELEYFAPISQLLNDNTYNFNYDFQNGINNNAASDDQFENKLQPSDMHQVNHsdslnqqslfvnptvyefq
Low Complexity Region (SEG)
MYENVEKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLDAKVEEDQSCVDQLGKTGGYVEHANASDEQKLMVKFPRTCSLAHLVELEYFAPISQLLNDNTYNFNYDFQNGINNNAASDDQFENKLQPSDMHQVNHSDSLNQQSLFVNPTVYEFQ
Disordered region (IsUnstruct)
************KEWYFFSP************RATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQ****************CVDQLGKTGGYVEHAN***EQKLMVKFPRTCSLAHLVELEYFAPISQLLNDNTYNFNYDFQNGI*******************************************
Disordered Region (DISOPRED)
MYENVEKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLN****************DWVLCRIYK********************************************************************************************************************FVNPTVYE**
Disordered Region (DISEMBL)
********EFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLDAKVEEDQSCVDQLGKTGGYVEHANASDEQKLMVKFPRTCSLAHLVELEYFAPISQLLNDNTYNFNYDFQNGINNNAASDDQFENKLQPSDMHQVNHSDSLNQQSLFVNPTVYEFQ
Disordered Region (DISPRO)
*YENVEKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPTRQP***NGSMKLDDWVLCRIYKKRQ**********************************************CSLAHLVELEYFAPISQLLNDNTYNFNYDFQNGINN*****************************SLFVNPTVYEF*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MYENVEKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLDAKVEEDQSCVDQLGKTGGYVEHANASDEQKLMVKFPRTCSLAHLVELEYFAPISQLLNDNTYNFNYDFQNGINNNAASDDQFENKLQPSDMHQVNHSDSLNQQSLFVNPTVYEFQ
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	236	2.2.26 [Sep-21-2011]
O49255	268	NAC transcription factor	yes	no	0.805	0.708	0.570	2e-59
Q9C932	317	NAC domain-containing pro	no	no	0.483	0.359	0.669	9e-42
A0SPJ6	396	NAC transcription factor	N/A	no	0.466	0.277	0.658	6e-41
Q9LDY8	317	NAC domain-containing pro	no	no	0.453	0.337	0.693	7e-41
A2YMR0	425	NAC transcription factor	N/A	no	0.466	0.258	0.627	1e-40
A0SPJ9	402	NAC transcription factor	N/A	no	0.563	0.330	0.568	1e-40
Q8GY42	323	NAC transcription factor	no	no	0.533	0.390	0.607	3e-40
D2SMN4	406	NAC transcription factor	N/A	no	0.555	0.322	0.553	3e-40
Q8H4S4	425	NAC transcription factor	no	no	0.449	0.249	0.64	5e-40
A0SPJ3	405	NAC transcription factor	N/A	no	0.466	0.271	0.627	6e-40

>sp|O49255|NAC29_ARATH NAC transcription factor 29 OS=Arabidopsis thaliana GN=NAC029 PE=2 SV=1

 Score =  229 bits (583), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 117/205 (57%), Positives = 145/205 (70%), Gaps = 15/205 (7%)

Query: 6   EKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFY 65
           EK EFGE EWYFFSPR+RKYPNG RPNRA VSGYWKATGTDKAI+ GS  +GVKKALVFY
Sbjct: 56  EKTEFGENEWYFFSPRERKYPNGVRPNRAAVSGYWKATGTDKAIHSGSSNVGVKKALVFY 115

Query: 66  KGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLDAKVE 125
           KGRPPKGIKTDWIMHEYRL+D  +   K NGSM+LD+WVLCRIYKKR  G+  +L+    
Sbjct: 116 KGRPPKGIKTDWIMHEYRLHDSRKASTKRNGSMRLDEWVLCRIYKKR--GASKLLN---- 169

Query: 126 EDQSCVDQL---GKTGGYVEHANASDEQKLM----VKFPRTCSLAHLVELEYFAPISQLL 178
           E +  +D++    +T   V  A    E+++M    +K PRTCSLAHL+E++Y  P+S + 
Sbjct: 170 EQEGFMDEVLMEDETKVVVNEAERRTEEEIMMMTSMKLPRTCSLAHLLEMDYMGPVSHI- 228

Query: 179 NDNTYNFNYDFQNGINNNAASDDQF 203
            DN   F++  Q    ++   D QF
Sbjct: 229 -DNFSQFDHLHQPDSESSWFGDLQF 252

May function in the transition between active cell division and cell expansion.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9C932|NAC19_ARATH NAC domain-containing protein 19 OS=Arabidopsis thaliana GN=NAC019 PE=1 SV=1

 Score =  170 bits (430), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 79/118 (66%), Positives = 92/118 (77%), Gaps = 4/118 (3%)

Query: 7   KAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYK 66
           KA FGEKEWYFFSPRDRKYPNG+RPNR   SGYWKATGTDK I    + +G+KKALVFY 
Sbjct: 62  KALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYI 121

Query: 67  GRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLDAKV 124
           G+ PKG KT+WIMHEYRL +P+R+    NGS KLDDWVLCRIYKK+ +  + V D  +
Sbjct: 122 GKAPKGTKTNWIMHEYRLIEPSRR----NGSTKLDDWVLCRIYKKQSSAQKQVYDNGI 175

Transcription factors that bind specifically to the 5'-CATGTG-3' motif.

Arabidopsis thaliana (taxid: 3702)

>sp|A0SPJ6|NAMB2_TRIDB NAC transcription factor NAM-B2 OS=Triticum durum GN=NAM-B2 PE=2 SV=1

 Score =  167 bits (423), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 81/123 (65%), Positives = 92/123 (74%), Gaps = 13/123 (10%)

Query: 2   YENVEKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYG---GSKYLGV 58
           +E  EKA FGE+EWYFFSPRDRKYPNG RPNRA  SGYWKATGTDK I     G + +GV
Sbjct: 71  WELPEKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILASGCGREKVGV 130

Query: 59  KKALVFYKGRPPKGIKTDWIMHEYRLNDP------TRQPYKHNG----SMKLDDWVLCRI 108
           KKALVFY+G+PPKG+KT+WIMHEYRL D       +R P    G    S++LDDWVLCRI
Sbjct: 131 KKALVFYRGKPPKGLKTNWIMHEYRLTDASSSATTSRPPPVTGGSRSASLRLDDWVLCRI 190

Query: 109 YKK 111
           YKK
Sbjct: 191 YKK 193

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. The tetraploid cultivated wheat (T.durum) contains one additional gene encoding for a functional protein (NAM-A1) and one extra pseudogene (NAM-B1) (PubMed:17124321). Plays a weaker role in terminal senescence than NAM-A1.

Triticum durum (taxid: 4567)

>sp|Q9LDY8|NAC55_ARATH NAC domain-containing protein 55 OS=Arabidopsis thaliana GN=NAC055 PE=2 SV=1

 Score =  167 bits (422), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 77/111 (69%), Positives = 89/111 (80%), Gaps = 4/111 (3%)

Query: 7   KAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYK 66
           KA FGEKEWYFFSPRDRKYPNG+RPNR   SGYWKATGTDK I    + +G+KKALVFY 
Sbjct: 62  KALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVISTEGRRVGIKKALVFYI 121

Query: 67  GRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSR 117
           G+ PKG KT+WIMHEYRL +P+R+    NGS KLDDWVLCRIYKK+ +  +
Sbjct: 122 GKAPKGTKTNWIMHEYRLIEPSRR----NGSTKLDDWVLCRIYKKQTSAQK 168

Transcription factors that bind specifically to the 5'-CATGTG-3' motif.

Arabidopsis thaliana (taxid: 3702)

>sp|A2YMR0|NAC10_ORYSI NAC transcription factor ONAC010 OS=Oryza sativa subsp. indica GN=ONAC010 PE=3 SV=1

 Score =  166 bits (421), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 81/129 (62%), Positives = 92/129 (71%), Gaps = 19/129 (14%)

Query: 2   YENVEKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGS---KYLGV 58
           +E  EKA FGE+EWYFFSPRDRKYPNG RPNRA  SGYWKATGTDK I       + +GV
Sbjct: 72  WELPEKANFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPIMASGSTREKVGV 131

Query: 59  KKALVFYKGRPPKGIKTDWIMHEYRLND---------PTRQP-------YKHNGSMKLDD 102
           KKALVFY+G+PPKG+KT+WIMHEYRL D          TRQP        +   S++LDD
Sbjct: 132 KKALVFYRGKPPKGVKTNWIMHEYRLTDTSSSAAAVATTRQPPPPITGGSRGAVSLRLDD 191

Query: 103 WVLCRIYKK 111
           WVLCRIYKK
Sbjct: 192 WVLCRIYKK 200

Transcription factor of the NAC family associated with male fertility.

Oryza sativa subsp. indica (taxid: 39946)

>sp|A0SPJ9|NAM2_HORVD NAC transcription factor NAM-2 OS=Hordeum vulgare var. distichum GN=NAM-2 PE=4 SV=1

 Score =  166 bits (420), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 83/146 (56%), Positives = 99/146 (67%), Gaps = 13/146 (8%)

Query: 2   YENVEKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYG---GSKYLGV 58
           +E  EKA FGE+EWYFFSPRDRKYPNG RPNRA  SGYWKATGTDK I     G + +GV
Sbjct: 71  WELPEKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILASGCGREKVGV 130

Query: 59  KKALVFYKGRPPKGIKTDWIMHEYRLNDP------TRQPYKHNG----SMKLDDWVLCRI 108
           K ALVFY+G+PPKG+KT+WIMHEYRL D       +R P    G    S++LDDWVLCRI
Sbjct: 131 KXALVFYRGKPPKGLKTNWIMHEYRLTDASSSAATSRPPPVTGGSRAASLRLDDWVLCRI 190

Query: 109 YKKRQTGSRSVLDAKVEEDQSCVDQL 134
           YKK    + +     +E + S  D +
Sbjct: 191 YKKINKAAAADQQRSMECEDSVEDAV 216

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. Sequences of 11 European varieties of H.vulgare tested belongs to the same haplotype while the sequence found in H.spontaneum, an ancestor of the cultivated H.vulgare which has a higher GPC, belongs to an other haplotype.

Hordeum vulgare var. distichum (taxid: 112509)

>sp|Q8GY42|NAC25_ARATH NAC transcription factor 25 OS=Arabidopsis thaliana GN=NAC025 PE=2 SV=1

 Score =  165 bits (417), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 82/135 (60%), Positives = 92/135 (68%), Gaps = 9/135 (6%)

Query: 2   YENVEKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYG-GSKYLGVKK 60
           +E   KA FGE EWYFFSPRDRKYPNG RPNRA  SGYWKATGTDK I+   S  +GVKK
Sbjct: 59  WELPSKASFGEHEWYFFSPRDRKYPNGVRPNRAATSGYWKATGTDKPIFTCNSHKVGVKK 118

Query: 61  ALVFYKGRPPKGIKTDWIMHEYRLND--------PTRQPYKHNGSMKLDDWVLCRIYKKR 112
           ALVFY G+PPKGIKTDWIMHEYRL D        P         S++LDDWVLCRIYKK 
Sbjct: 119 ALVFYGGKPPKGIKTDWIMHEYRLTDGNLSTAAKPPDLTTTRKNSLRLDDWVLCRIYKKN 178

Query: 113 QTGSRSVLDAKVEED 127
            +   ++    + ED
Sbjct: 179 SSQRPTMERVLLRED 193

Transcription factor of the NAC family. May be associated with anther development and pollen production.

Arabidopsis thaliana (taxid: 3702)

>sp|D2SMN4|NAMB1_HORVS NAC transcription factor NAM-B1 OS=Hordeum vulgare subsp. spontaneum GN=NAM-B1 PE=4 SV=1

 Score =  165 bits (417), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 83/150 (55%), Positives = 98/150 (65%), Gaps = 19/150 (12%)

Query: 2   YENVEKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYG-----GSKYL 56
           +E  EKA FGE EWYFFSPRDRKYPNG RPNRA  SGYWKATGTDK I       G + +
Sbjct: 78  WELPEKATFGEHEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILASATGCGREKV 137

Query: 57  GVKKALVFYKGRPPKGIKTDWIMHEYRLNDP-------TRQPYKHNG-----SMKLDDWV 104
           GVKKALVFY+G+PP+G+KT+WIMHEYRL          +R P    G     S++LDDWV
Sbjct: 138 GVKKALVFYRGKPPRGLKTNWIMHEYRLTGASAGSTTTSRPPPVTGGSRAPASLRLDDWV 197

Query: 105 LCRIYKKRQTGSRSVLDAKVEEDQSCVDQL 134
           LCRIYKK    + +V D   +    C D +
Sbjct: 198 LCRIYKKTSKAAAAVGDE--QRSMECEDSV 225

Transcription factor of the NAC family associated with the grain protein content (GPC). Sequences of the 11 European varieties of H.vulgare tested belongs to the same haplotype while the sequence found in H.spontaneum, an ancestor of the cultivated H.vulgare which has a higher GPC, belongs to an other haplotype.

Hordeum vulgare subsp. spontaneum (taxid: 77009)

>sp|Q8H4S4|NAC10_ORYSJ NAC transcription factor ONAC010 OS=Oryza sativa subsp. japonica GN=ONAC010 PE=2 SV=1

 Score =  164 bits (415), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 90/125 (72%), Gaps = 19/125 (15%)

Query: 6   EKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGS---KYLGVKKAL 62
           EKA FGE+EWYFFSPRDRKYPNG RPNRA  SGYWKATGTDK I       + +GVKKAL
Sbjct: 76  EKANFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPIMSSGSTREKVGVKKAL 135

Query: 63  VFYKGRPPKGIKTDWIMHEYRLND---------PTRQP-------YKHNGSMKLDDWVLC 106
           VFY+G+PPKG+KT+WIMHEYRL D          TR+P        K   S++LDDWVLC
Sbjct: 136 VFYRGKPPKGVKTNWIMHEYRLTDTSSSAAAVATTRRPPPPITGGSKGAVSLRLDDWVLC 195

Query: 107 RIYKK 111
           RIYKK
Sbjct: 196 RIYKK 200

Transcription factor of the NAC family associated with male fertility. Involved in anther development, but not in senescence. Reduced expression of NAC5 via RNAi leads to male-sterility.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A0SPJ3|NAMA1_TRIDB NAC transcription factor NAM-A1 OS=Triticum durum GN=NAM-A1 PE=2 SV=1

 Score =  164 bits (415), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 81/129 (62%), Positives = 91/129 (70%), Gaps = 19/129 (14%)

Query: 2   YENVEKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGS-------K 54
           +E  EKA FGE+EWYFFSPRDRKYPNG RPNRA  SGYWKATGTDK I           +
Sbjct: 76  WELPEKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILASGTGCGLVRE 135

Query: 55  YLGVKKALVFYKGRPPKGIKTDWIMHEYRLND------PTRQPYKHNG------SMKLDD 102
            LGVKKALVFY+G+PPKG+KT+WIMHEYRL D       +R P    G      S++LDD
Sbjct: 136 KLGVKKALVFYRGKPPKGLKTNWIMHEYRLTDVSGSTTTSRPPPPVTGGSRAAASLRLDD 195

Query: 103 WVLCRIYKK 111
           WVLCRIYKK
Sbjct: 196 WVLCRIYKK 204

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. The tetraploid cultivated wheat (T.durum) contains one additional gene encoding for a functional protein (NAM-B2) and one extra pseudogene (NAM-B1) (PubMed:17124321).

Triticum durum (taxid: 4567)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	236
122894106	264	NAC domain protein [Citrus sinensis]	0.843	0.753	1.0	1e-116
255562922	281	NAC domain-containing protein, putative	0.915	0.768	0.620	7e-73
260600584	282	NAP-like transcription factor [Vitis vin	0.932	0.780	0.626	1e-72
296086346	282	unnamed protein product [Vitis vinifera]	0.936	0.783	0.616	4e-72
359473352	817	PREDICTED: cytochrome P450 704C1-like [V	0.885	0.255	0.599	6e-68
302398991	280	NAC domain class transcription factor [M	0.813	0.685	0.610	3e-65
302399035	279	NAC domain class transcription factor [M	0.813	0.688	0.630	4e-65
351728011	279	NAC domain protein [Glycine max] gi|1879	0.923	0.781	0.556	2e-64
352144623	287	NAC domain protein NAC2 [Salvia miltiorr	0.953	0.783	0.556	1e-63
449434768	290	PREDICTED: NAC transcription factor 29-l	0.894	0.727	0.570	1e-62

>gi|122894106|gb|ABM67699.1| NAC domain protein [Citrus sinensis]

 Score =  422 bits (1085), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 199/199 (100%), Positives = 199/199 (100%)

Query: 6   EKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFY 65
           EKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFY
Sbjct: 56  EKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFY 115

Query: 66  KGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLDAKVE 125
           KGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLDAKVE
Sbjct: 116 KGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLDAKVE 175

Query: 126 EDQSCVDQLGKTGGYVEHANASDEQKLMVKFPRTCSLAHLVELEYFAPISQLLNDNTYNF 185
           EDQSCVDQLGKTGGYVEHANASDEQKLMVKFPRTCSLAHLVELEYFAPISQLLNDNTYNF
Sbjct: 176 EDQSCVDQLGKTGGYVEHANASDEQKLMVKFPRTCSLAHLVELEYFAPISQLLNDNTYNF 235

Query: 186 NYDFQNGINNNAASDDQFE 204
           NYDFQNGINNNAASDDQFE
Sbjct: 236 NYDFQNGINNNAASDDQFE 254

Source: Citrus sinensis

Species: Citrus sinensis

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255562922|ref|XP_002522466.1| NAC domain-containing protein, putative [Ricinus communis] gi|223538351|gb|EEF39958.1| NAC domain-containing protein, putative [Ricinus communis]

 Score =  279 bits (713), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 149/240 (62%), Positives = 171/240 (71%), Gaps = 24/240 (10%)

Query: 6   EKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFY 65
           EK+EF E EWYFF+PRDRKYPNG RPNRATVSGYWKATGTDKAIY  SKY+GVKKALVFY
Sbjct: 57  EKSEFVENEWYFFTPRDRKYPNGVRPNRATVSGYWKATGTDKAIYSASKYVGVKKALVFY 116

Query: 66  KGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLDAKVE 125
           KGRPPKGIKTDWIMHEYRLND  +Q  K NGSM+LDDWVLCRIYKKRQ      L+ K+E
Sbjct: 117 KGRPPKGIKTDWIMHEYRLNDSRKQASKQNGSMRLDDWVLCRIYKKRQMARH--LEEKIE 174

Query: 126 EDQSCVDQLGKTGGYVEHANASDEQKLMVKFPRTCSLAHLVELEYFAPISQLLNDNTYNF 185
              + +D+          +N   EQ+ M+KFPRT SL+HL++L+Y  PISQLLNDNT N 
Sbjct: 175 YRNTQLDKPA--------SNDISEQQ-MLKFPRTFSLSHLLDLDYMGPISQLLNDNTCNA 225

Query: 186 NYDFQNGINNNAASDDQFENKLQPSDMH---------QVNHSDSLNQQSLFVNPTVYEFQ 236
           ++DFQN +       DQ E K Q  +M          QVN   +LN Q LFVNP VYEFQ
Sbjct: 226 SFDFQNIMAK--VETDQVE-KFQLGEMSQQYVDSGKLQVNQGSALN-QPLFVNPMVYEFQ 281

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|260600584|gb|ACX47024.1| NAP-like transcription factor [Vitis vinifera]

 Score =  278 bits (712), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 154/246 (62%), Positives = 175/246 (71%), Gaps = 26/246 (10%)

Query: 2   YENVEKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKA 61
           +E  EKAEFGE EWYFFSPRDRKYPNG RPNRATVSGYWKATGTDKAIY G+KY+GVKKA
Sbjct: 52  WELPEKAEFGENEWYFFSPRDRKYPNGARPNRATVSGYWKATGTDKAIYSGAKYVGVKKA 111

Query: 62  LVFYKGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLD 121
           LVFYKGRPPKGIKTDWIMHEYRL+D   +P KHNGSM+LDDWVLCRIYKK+  G   +L+
Sbjct: 112 LVFYKGRPPKGIKTDWIMHEYRLSDSRPRPKKHNGSMRLDDWVLCRIYKKKHVG--RILE 169

Query: 122 AKVEEDQSCVDQLGKTGGYVEHANASD--EQKLMVKFPRTCSLAHLVELEYFAPISQLLN 179
            K E            G  +   N+ D  EQ LM KFPRT SLAHL+++EY  PISQLL 
Sbjct: 170 EKEE----------NLGPQIPVTNSDDGGEQHLM-KFPRTFSLAHLLDMEYLGPISQLLG 218

Query: 180 DNTYNFNYDFQNGINNNAASD----DQFENKLQP-----SDMHQVNHSDSLNQQSLFVNP 230
           DN+Y+  +DFQ  I+N A +D    D+FE    P     S   QVN +   N Q LFVNP
Sbjct: 219 DNSYHSAFDFQGTISNIAGTDPPGVDKFELFQLPCQYNDSTKFQVNQNHIPN-QPLFVNP 277

Query: 231 TVYEFQ 236
            VYEFQ
Sbjct: 278 -VYEFQ 282

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296086346|emb|CBI31935.3| unnamed protein product [Vitis vinifera]

 Score =  276 bits (707), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 151/245 (61%), Positives = 174/245 (71%), Gaps = 24/245 (9%)

Query: 2   YENVEKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKA 61
           +E  EKAEFGE EWYFFSPRDRKYPNG RPNRATVSGYWKATGTDKAIY G+KY+GVKKA
Sbjct: 52  WELPEKAEFGENEWYFFSPRDRKYPNGARPNRATVSGYWKATGTDKAIYSGAKYVGVKKA 111

Query: 62  LVFYKGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLD 121
           LVFYKGRPPKGIKTDWIMHEYRL+D   +P KHNGSM+LDDWVLCRIYKK+  G   +L+
Sbjct: 112 LVFYKGRPPKGIKTDWIMHEYRLSDSRPRPKKHNGSMRLDDWVLCRIYKKKHVG--RILE 169

Query: 122 AKVEEDQSCVDQLGKTGGYVEHANASD-EQKLMVKFPRTCSLAHLVELEYFAPISQLLND 180
            K E            G  +   N+ D  ++  VKFPRT SLAHL+++EY  PISQLL D
Sbjct: 170 EKEE----------NLGPQIPVTNSDDGGEQHQVKFPRTFSLAHLLDMEYLGPISQLLGD 219

Query: 181 NTYNFNYDFQNGINNNAASD----DQFENKLQP-----SDMHQVNHSDSLNQQSLFVNPT 231
           N+Y+  +DFQ  I+N A +D    D+FE    P     S   QVN +   N Q LFVNP 
Sbjct: 220 NSYHSAFDFQGTISNIAGTDPPGVDKFELFQLPCQYNDSTKFQVNQNHIPN-QPLFVNP- 277

Query: 232 VYEFQ 236
           VYEFQ
Sbjct: 278 VYEFQ 282

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359473352|ref|XP_002271847.2| PREDICTED: cytochrome P450 704C1-like [Vitis vinifera]

 Score =  263 bits (671), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 139/232 (59%), Positives = 163/232 (70%), Gaps = 23/232 (9%)

Query: 10  FGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRP 69
           F E EWYFFSPRDRKYPNG RPNRATVSGYWKATGTDKAIY G+KY+GVKKALVFYKGRP
Sbjct: 60  FIENEWYFFSPRDRKYPNGARPNRATVSGYWKATGTDKAIYSGAKYVGVKKALVFYKGRP 119

Query: 70  PKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLDAKVEEDQS 129
           PKGIKTDWIMHEYRL+D   +P KHNGSM+LDDWVLCRIYKK+  G   +L+ K E    
Sbjct: 120 PKGIKTDWIMHEYRLSDSRPRPKKHNGSMRLDDWVLCRIYKKKHVG--RILEEKEE---- 173

Query: 130 CVDQLGKTGGYVEHANASD-EQKLMVKFPRTCSLAHLVELEYFAPISQLLNDNTYNFNYD 188
                   G  +   N+ D  ++  VKFPRT SLAHL+++EY  PISQLL DN+Y+  +D
Sbjct: 174 ------NLGPQIPVTNSDDGGEQHQVKFPRTFSLAHLLDMEYLGPISQLLGDNSYHSAFD 227

Query: 189 FQNGINNNAASD----DQFENKLQP-----SDMHQVNHSDSLNQQSLFVNPT 231
           FQ  I+N A +D    D+FE    P     S   QVN  + +  Q LFVNP+
Sbjct: 228 FQGTISNIAGTDPPGVDKFELFQLPCQYNDSTKFQVNQ-NHIPNQPLFVNPS 278

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302398991|gb|ADL36790.1| NAC domain class transcription factor [Malus x domestica]

 Score =  254 bits (648), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 124/203 (61%), Positives = 151/203 (74%), Gaps = 11/203 (5%)

Query: 2   YENVEKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKA 61
           +E  EKAEFGE EWYFF+PRDRKYPNG RPNRATVSGYWKATGTDKAIY  SKY+GVKKA
Sbjct: 52  WELPEKAEFGENEWYFFTPRDRKYPNGVRPNRATVSGYWKATGTDKAIYSESKYVGVKKA 111

Query: 62  LVFYKGRPPKGIKTDWIMHEYRLNDPTR-QPYKHNGSMKLDDWVLCRIYKKRQTGSRSVL 120
           LVFY+GRPPKG+K+DWIMHEYRL+D  + QP KH GSM+LDDWVLCRIYKK+  G ++ L
Sbjct: 112 LVFYQGRPPKGVKSDWIMHEYRLSDSRKQQPNKHLGSMRLDDWVLCRIYKKKHPG-KAYL 170

Query: 121 DAKVEEDQSCVDQLGKTGGYVEHANASDEQKLMVKFPRTCSLAHLVELEYFAPISQLLND 180
           D KVEEDQ    +  +T         ++E+++M+KFPR CS+  L++++Y  PISQL +D
Sbjct: 171 DQKVEEDQKIEMRTPETA-------KANEEQVMLKFPRACSITSLLDMDYLGPISQLFSD 223

Query: 181 NTYNFNYDFQNGINNNAASDDQF 203
           N     YDFQ  +    A   Q 
Sbjct: 224 NIS--GYDFQTSMAGAGAGQAQM 244

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302399035|gb|ADL36812.1| NAC domain class transcription factor [Malus x domestica]

 Score =  253 bits (647), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 128/203 (63%), Positives = 152/203 (74%), Gaps = 11/203 (5%)

Query: 2   YENVEKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKA 61
           +E  EKAEFGE EWYFF+PRDRKYPNG RPNRATVSGYWKATGTDKAIY  SKY+GVKKA
Sbjct: 52  WELPEKAEFGENEWYFFTPRDRKYPNGIRPNRATVSGYWKATGTDKAIYSESKYVGVKKA 111

Query: 62  LVFYKGRPPKGIKTDWIMHEYRLNDPTRQPY-KHNGSMKLDDWVLCRIYKKRQTGSRSVL 120
           LVFY+GRPPKG+K+DWIMHEYRL D  +Q   K  GSM+LDDWVLCRIYKKRQ G ++ L
Sbjct: 112 LVFYQGRPPKGVKSDWIMHEYRLGDTRKQQANKQLGSMRLDDWVLCRIYKKRQPG-KAYL 170

Query: 121 DAKVEEDQSCVDQLGKTGGYVEHANASDEQKLMVKFPRTCSLAHLVELEYFAPISQLLND 180
           D KVEED+       +T      A A++EQ +M+KFPRTCS+  L++++Y  P+SQLL D
Sbjct: 171 DPKVEEDEKIEMTTPET------AKANEEQ-MMLKFPRTCSITSLLDMDYLGPMSQLLGD 223

Query: 181 NTYNFNYDFQNGINNNAASDDQF 203
           N  N  YDFQ+ +    A   Q 
Sbjct: 224 N--NSGYDFQSSLAGAGAGHAQM 244

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351728011|ref|NP_001238204.1| NAC domain protein [Glycine max] gi|187940301|gb|ACD39381.1| NAC domain protein [Glycine max]

 Score =  251 bits (641), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 134/241 (55%), Positives = 166/241 (68%), Gaps = 23/241 (9%)

Query: 2   YENVEKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKA 61
           +E  EK +FGEKEWYFFSPR+RKYPNG RPNRATVSGYWKATGTDKAIY GSK++GVKKA
Sbjct: 52  WELPEKTDFGEKEWYFFSPRERKYPNGVRPNRATVSGYWKATGTDKAIYSGSKHVGVKKA 111

Query: 62  LVFYKGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLD 121
           LVFYKG+PPKG+KTDWIMHEYRL    RQ  +  GSM+LDDWVLCRIYKK+  G    ++
Sbjct: 112 LVFYKGKPPKGLKTDWIMHEYRLIGSRRQANRQVGSMRLDDWVLCRIYKKKNIGKS--ME 169

Query: 122 AKVEEDQSCVDQLGKTGGYVEHANASDEQKLMVKFPRTCSLAHLVELEYFAPISQLLNDN 181
           AK E   + ++        +  AN   EQ+ MVKFPRT SL HL+E++Y  PIS +L+D 
Sbjct: 170 AKEEYPIALIN--------LTPANNDSEQE-MVKFPRTSSLTHLLEMDYLGPISHILSDA 220

Query: 182 TYNFNYDFQNGINNNAASDDQFENKLQPSDM--------HQVNHSDSLNQQSLFVNPTVY 233
           TYN  +DFQ  IN      D F  K QP ++        +QV  + ++N  ++FVN   Y
Sbjct: 221 TYNSTFDFQ--INTANGGIDPFV-KPQPVEIPYAADSGKYQVKQNSTIN-PTIFVNQVYY 276

Query: 234 E 234
           +
Sbjct: 277 Q 277

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|352144623|gb|AEQ61906.1| NAC domain protein NAC2 [Salvia miltiorrhiza]

 Score =  248 bits (633), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 132/237 (55%), Positives = 159/237 (67%), Gaps = 12/237 (5%)

Query: 6   EKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFY 65
           +KAEFGE EWYFF+PRDRKYPNG RPNRA VSGYWKATGTDKAI+ GSKY+GVKKALVFY
Sbjct: 57  DKAEFGENEWYFFTPRDRKYPNGVRPNRAAVSGYWKATGTDKAIHSGSKYVGVKKALVFY 116

Query: 66  KGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLDAKVE 125
           KGRPPKG+KTDWIMHEYRLN+   QPYK NGSM+LDDWVLCRIYKK+  G  S     ++
Sbjct: 117 KGRPPKGVKTDWIMHEYRLNESRSQPYKQNGSMRLDDWVLCRIYKKKNLGRSSFEHQPIK 176

Query: 126 EDQSCVD-QLGKTGGYVEHANASDEQKLMV---KFPRTCSLAHLVELEYF--APISQLLN 179
            ++S V  Q+       +    S+EQ+      +FPRT SL HL E + +  + ISQLLN
Sbjct: 177 VEESFVSHQIAAAND--DRNRGSEEQEAAAAAYRFPRTHSLTHLWEFDSYMGSSISQLLN 234

Query: 180 DNTYNFNYDFQNGINNNAASDDQFENKLQPSDMHQVNHSDSLNQQSLFVNPTVYEFQ 236
           DN+  +N +  N  N+N       E   Q SD    +H      Q+ FVNP   +FQ
Sbjct: 235 DNSSLYNLNINNQENDNGGFFRAHEKLQQSSDSAAKSHV----HQTTFVNPVYDQFQ 287

Source: Salvia miltiorrhiza

Species: Salvia miltiorrhiza

Genus: Salvia

Family: Lamiaceae

Order: Lamiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449434768|ref|XP_004135168.1| PREDICTED: NAC transcription factor 29-like [Cucumis sativus] gi|449530426|ref|XP_004172196.1| PREDICTED: NAC transcription factor 29-like [Cucumis sativus]

 Score =  245 bits (625), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 134/235 (57%), Positives = 160/235 (68%), Gaps = 24/235 (10%)

Query: 6   EKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFY 65
           EKA+ GE EWYFFSPRDRKYPNG RPNRA VSGYWKATGTDKAIY  SKY+GVKKALVFY
Sbjct: 56  EKADSGENEWYFFSPRDRKYPNGVRPNRAAVSGYWKATGTDKAIYSASKYVGVKKALVFY 115

Query: 66  KGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLDAKVE 125
           KG+PPKG+KTDWIMHEYRL +  +Q  K +GSM+LDDWVLCRIYKKR + ++ +L+ K E
Sbjct: 116 KGKPPKGVKTDWIMHEYRLIESNKQSMKQSGSMRLDDWVLCRIYKKRHS-NKGLLEEKTE 174

Query: 126 EDQSCVDQLGKTGGYVEHANASDEQKLMVKFPRTCSLAHLVELEYFAPISQLLND-NTYN 184
           E       L      VE  N   +Q  M+KFPRT S+ HL++L+Y  PISQL ND ++ N
Sbjct: 175 E-------LAAQNDMVE-GNGQGQQ--MMKFPRTFSITHLLDLDYLGPISQLFNDSSSMN 224

Query: 185 FNYDFQNGINNNAASDDQF----ENKLQPSDMH------QVNHSDSLNQQSLFVN 229
               FQN  N  AA+        E +L P D        QVNHS++   Q +FVN
Sbjct: 225 PTLGFQN--NTAAAAFTSVGKIEEGELMPLDYSSSSTDFQVNHSNNFFNQPIFVN 277

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	236
TAIR|locus:2007166	268	NAP "NAC-like, activated by AP	0.805	0.708	0.570	9.6e-57
TAIR|locus:2011531	317	NAC019 "NAC domain containing	0.470	0.350	0.686	6.7e-43
TAIR|locus:2011516	320	NAM "NO APICAL MERISTEM" [Arab	0.491	0.362	0.68	1.6e-40
TAIR|locus:2198225	289	ATAF1 [Arabidopsis thaliana (t	0.461	0.377	0.672	5.8e-40
TAIR|locus:2090186	364	NAC2 "NAC domain containing pr	0.542	0.351	0.601	1.1e-39
TAIR|locus:2090176	317	NAC3 "NAC domain containing pr	0.449	0.334	0.711	1.8e-39
TAIR|locus:2008490	323	NAC025 "NAC domain containing	0.533	0.390	0.607	7.8e-39
TAIR|locus:2124014	314	RD26 "RESPONSIVE TO DESICCATIO	0.597	0.449	0.549	7.8e-39
TAIR|locus:2204685	253	NAC032 "NAC domain containing	0.444	0.415	0.691	1.9e-37
TAIR|locus:2160634	312	NAC102 "NAC domain containing	0.843	0.637	0.455	4.9e-37

TAIR|locus:2007166 NAP "NAC-like, activated by AP3/PI" [Arabidopsis thaliana (taxid:3702)]

 Score = 584 (210.6 bits), Expect = 9.6e-57, P = 9.6e-57
 Identities = 117/205 (57%), Positives = 145/205 (70%)

Query:     6 EKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFY 65
             EK EFGE EWYFFSPR+RKYPNG RPNRA VSGYWKATGTDKAI+ GS  +GVKKALVFY
Sbjct:    56 EKTEFGENEWYFFSPRERKYPNGVRPNRAAVSGYWKATGTDKAIHSGSSNVGVKKALVFY 115

Query:    66 KGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLDAKVE 125
             KGRPPKGIKTDWIMHEYRL+D  +   K NGSM+LD+WVLCRIYKKR  G+  +L+    
Sbjct:   116 KGRPPKGIKTDWIMHEYRLHDSRKASTKRNGSMRLDEWVLCRIYKKR--GASKLLN---- 169

Query:   126 EDQSCVDQL---GKTGGYVEHANASDEQKLMV----KFPRTCSLAHLVELEYFAPISQLL 178
             E +  +D++    +T   V  A    E+++M+    K PRTCSLAHL+E++Y  P+S + 
Sbjct:   170 EQEGFMDEVLMEDETKVVVNEAERRTEEEIMMMTSMKLPRTCSLAHLLEMDYMGPVSHI- 228

Query:   179 NDNTYNFNYDFQNGINNNAASDDQF 203
              DN   F++  Q    ++   D QF
Sbjct:   229 -DNFSQFDHLHQPDSESSWFGDLQF 252

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0010150 "leaf senescence" evidence=IMP

GO:0009617 "response to bacterium" evidence=RCA

GO:0045087 "innate immune response" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=IMP

GO:0009908 "flower development" evidence=IMP

TAIR|locus:2011531 NAC019 "NAC domain containing protein 19" [Arabidopsis thaliana (taxid:3702)]

 Score = 429 (156.1 bits), Expect = 6.7e-43, Sum P(2) = 6.7e-43
 Identities = 79/115 (68%), Positives = 91/115 (79%)

Query:     7 KAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYK 66
             KA FGEKEWYFFSPRDRKYPNG+RPNR   SGYWKATGTDK I    + +G+KKALVFY 
Sbjct:    62 KALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYI 121

Query:    67 GRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLD 121
             G+ PKG KT+WIMHEYRL +P+R+    NGS KLDDWVLCRIYKK+ +  + V D
Sbjct:   122 GKAPKGTKTNWIMHEYRLIEPSRR----NGSTKLDDWVLCRIYKKQSSAQKQVYD 172

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009414 "response to water deprivation" evidence=RCA;IMP

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010286 "heat acclimation" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:2011516 NAM "NO APICAL MERISTEM" [Arabidopsis thaliana (taxid:3702)]

 Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
 Identities = 85/125 (68%), Positives = 94/125 (75%)

Query:     2 YENVEKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIY----GGSKYLG 57
             +E   KA FGE+EWYFFSPRDRKYPNG RPNRA  SGYWKATGTDK +     GGSK +G
Sbjct:    60 WELPAKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVISTGGGGSKKVG 119

Query:    58 VKKALVFYKGRPPKGIKTDWIMHEYRLND--PTRQPYKHN--GSMKLDDWVLCRIYKKRQ 113
             VKKALVFY G+PPKG+K+DWIMHEYRL D  PT      N   S++LDDWVLCRIYKK  
Sbjct:   120 VKKALVFYSGKPPKGVKSDWIMHEYRLTDNKPTHICDFGNKKNSLRLDDWVLCRIYKKNN 179

Query:   114 -TGSR 117
              T SR
Sbjct:   180 STASR 184

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

TAIR|locus:2198225 ATAF1 [Arabidopsis thaliana (taxid:3702)]

 Score = 399 (145.5 bits), Expect = 5.8e-40, Sum P(2) = 5.8e-40
 Identities = 74/110 (67%), Positives = 84/110 (76%)

Query:     8 AEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKG 67
             A +GEKEWYFFSPRDRKYPNG+RPNR+  SGYWKATG DK I G  K +G+KKALVFY G
Sbjct:    56 ALYGEKEWYFFSPRDRKYPNGSRPNRSAGSGYWKATGADKPI-GLPKPVGIKKALVFYAG 114

Query:    68 RPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSR 117
             + PKG KT+WIMHEYRL D  R   K   S++LDDWVLCRIY K+    R
Sbjct:   115 KAPKGEKTNWIMHEYRLADVDRSVRKKKNSLRLDDWVLCRIYNKKGATER 164

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009611 "response to wounding" evidence=IEP;RCA

GO:0009788 "negative regulation of abscisic acid mediated signaling pathway" evidence=IMP

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009620 "response to fungus" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:2090186 NAC2 "NAC domain containing protein 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
 Identities = 86/143 (60%), Positives = 101/143 (70%)

Query:     2 YENVEKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYG--GSKYLGVK 59
             +E   KA FGE+EWYFFSPRDRKYPNG RPNRA  SGYWKATGTDK +    G++ +GVK
Sbjct:    60 WELPAKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLASDGNQKVGVK 119

Query:    60 KALVFYKGRPPKGIKTDWIMHEYRL--NDPTRQP------YKHNGSMKLDDWVLCRIYKK 111
             KALVFY G+PPKG+K+DWIMHEYRL  N P  +P       K N S++LDDWVLCRIYKK
Sbjct:   120 KALVFYSGKPPKGVKSDWIMHEYRLIENKPNNRPPGCDFGNKKN-SLRLDDWVLCRIYKK 178

Query:   112 RQTGSRSVLDAKVEEDQSCVDQL 134
                 SR V + K   D   +D +
Sbjct:   179 NNA-SRHVDNDK---DHDMIDYI 197

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;NAS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

TAIR|locus:2090176 NAC3 "NAC domain containing protein 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
 Identities = 79/111 (71%), Positives = 90/111 (81%)

Query:     7 KAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYK 66
             KA FGEKEWYFFSPRDRKYPNG+RPNR   SGYWKATGTDK I    + +G+KKALVFY 
Sbjct:    62 KALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVISTEGRRVGIKKALVFYI 121

Query:    67 GRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSR 117
             G+ PKG KT+WIMHEYRL +P+R+    NGS KLDDWVLCRIYKK QT ++
Sbjct:   122 GKAPKGTKTNWIMHEYRLIEPSRR----NGSTKLDDWVLCRIYKK-QTSAQ 167

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA;TAS

GO:0009414 "response to water deprivation" evidence=RCA;IMP

GO:0005515 "protein binding" evidence=IPI

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0007154 "cell communication" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2008490 NAC025 "NAC domain containing protein 25" [Arabidopsis thaliana (taxid:3702)]

 Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
 Identities = 82/135 (60%), Positives = 92/135 (68%)

Query:     2 YENVEKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYG-GSKYLGVKK 60
             +E   KA FGE EWYFFSPRDRKYPNG RPNRA  SGYWKATGTDK I+   S  +GVKK
Sbjct:    59 WELPSKASFGEHEWYFFSPRDRKYPNGVRPNRAATSGYWKATGTDKPIFTCNSHKVGVKK 118

Query:    61 ALVFYKGRPPKGIKTDWIMHEYRLND--------PTRQPYKHNGSMKLDDWVLCRIYKKR 112
             ALVFY G+PPKGIKTDWIMHEYRL D        P         S++LDDWVLCRIYKK 
Sbjct:   119 ALVFYGGKPPKGIKTDWIMHEYRLTDGNLSTAAKPPDLTTTRKNSLRLDDWVLCRIYKKN 178

Query:   113 QTGSRSVLDAKVEED 127
              +   ++    + ED
Sbjct:   179 SSQRPTMERVLLRED 193

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2124014 RD26 "RESPONSIVE TO DESICCATION 26" [Arabidopsis thaliana (taxid:3702)]

 Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
 Identities = 83/151 (54%), Positives = 100/151 (66%)

Query:     7 KAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYK 66
             KA FGEKEWYFFSPRDRKYPNG+RPNR   SGYWKATGTDK I    + +G+KKALVFY 
Sbjct:    79 KALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITADGRRVGIKKALVFYA 138

Query:    67 GRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLDAKVEE 126
             G+ PKG KT+WIMHEYRL + +R     +GS KLDDWVLCRIYKK     R      V  
Sbjct:   139 GKAPKGTKTNWIMHEYRLIEHSRS----HGSSKLDDWVLCRIYKKTSGSQRQA----VTP 190

Query:   127 DQSCVDQLGKTGGYVEHANASDEQKLMVKFP 157
              Q+C ++    G     ++  D+  ++  FP
Sbjct:   191 VQACREEHSTNGSSSSSSSQLDD--VLDSFP 219

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0009414 "response to water deprivation" evidence=RCA;IMP

GO:0009737 "response to abscisic acid stimulus" evidence=RCA;IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0007165 "signal transduction" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:2204685 NAC032 "NAC domain containing protein 32" [Arabidopsis thaliana (taxid:3702)]

 Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
 Identities = 74/107 (69%), Positives = 85/107 (79%)

Query:     6 EKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFY 65
             + A +GEKEWYFFSPRDRKYPNG+RPNRA  +GYWKATG DK I G  K +G+KKALVFY
Sbjct:    57 DMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPI-GRPKPVGIKKALVFY 115

Query:    66 KGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKR 112
              G+PP G KT+WIMHEYRL D  R   K N S++LDDWVLCRIY K+
Sbjct:   116 SGKPPNGEKTNWIMHEYRLADVDRSVRKKN-SLRLDDWVLCRIYNKK 161

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

TAIR|locus:2160634 NAC102 "NAC domain containing protein 102" [Arabidopsis thaliana (taxid:3702)]

 Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
 Identities = 98/215 (45%), Positives = 124/215 (57%)

Query:     2 YENVEKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKA 61
             +E  E A +GEKEWYFFS RDRKYPNG+RPNRA  +GYWKATG DK I G  K LG+KKA
Sbjct:    93 WELPEMALYGEKEWYFFSHRDRKYPNGSRPNRAAGTGYWKATGADKPI-GKPKTLGIKKA 151

Query:    62 LVFYKGRPPKGIKTDWIMHEYRL-N-DPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRSV 119
             LVFY G+ PKGIKT+WIMHEYRL N D +    K N +++LDDWVLCRIY K+ T  + +
Sbjct:   152 LVFYAGKAPKGIKTNWIMHEYRLANVDRSASTNKKN-NLRLDDWVLCRIYNKKGTMEKYL 210

Query:   120 LDA--KVEEDQSCVDQLGKTGGYVEHANASDEQKLMVKFPRTCSLAHLVEL-----EYFA 172
               A  K  E  S  D    +         SD  ++  + P+  +L   +E        F+
Sbjct:   211 PAAAEKPTEKMSTSDSRCSSHVISPDVTCSDNWEVESE-PKWINLEDALEAFNDDTSMFS 269

Query:   173 PISQLLNDNTY-NFNYDFQNGINNNAASDDQFENK 206
              I  L ND     F Y   + +++     D FE K
Sbjct:   270 SIGLLQNDAFVPQFQYQSSDFVDS---FQDPFEQK 301

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0001666 "response to hypoxia" evidence=IMP

GO:0009507 "chloroplast" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O49255	NAC29_ARATH	No assigned EC number	0.5707	0.8050	0.7089	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	236
pfam02365	130	pfam02365, NAM, No apical meristem (NAM) protein	3e-47

>gnl|CDD|216997 pfam02365, NAM, No apical meristem (NAM) protein

 Score =  152 bits (386), Expect = 3e-47
 Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 1/80 (1%)

Query: 6   EKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIY-GGSKYLGVKKALVF 64
            KA+ G++EWYFFSPRDRKYPNG+R NRAT SGYWKATG DK +   G + +G+KK LVF
Sbjct: 50  GKAKGGDREWYFFSPRDRKYPNGSRTNRATGSGYWKATGKDKPVLSKGGEVVGMKKTLVF 109

Query: 65  YKGRPPKGIKTDWIMHEYRL 84
           YKGR PKG KTDW+MHEYRL
Sbjct: 110 YKGRAPKGEKTDWVMHEYRL 129

This is a family of no apical meristem (NAM) proteins these are plant development proteins. Mutations in NAM result in the failure to develop a shoot apical meristem in petunia embryos. NAM is indicated as having a role in determining positions of meristems and primordial. One member of this family NAP (NAC-like, activated by AP3/PI) is encoded by the target genes of the AP3/PI transcriptional activators and functions in the transition between growth by cell division and cell expansion in stamens and petals. Length = 130

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	236
PF02365	129	NAM: No apical meristem (NAM) protein; InterPro: I	99.92

>PF02365 NAM: No apical meristem (NAM) protein; InterPro: IPR003441 The NAC domain (for Petunia hybrida (Petunia) NAM and for Arabidopsis ATAF1, ATAF2, and CUC2) is an N-terminal module of ~160 amino acids, which is found in proteins of the NAC family of plant-specific transcriptional regulators (no apical meristem (NAM) proteins) []

Probab=99.92  E-value=1.2e-25  Score=180.87  Aligned_cols=84  Identities=58%  Similarity=1.135  Sum_probs=64.5

Q ss_pred             CCCCCcCCCCCceEEEEeecCCCCCCCCCCccccCCcEEEEcccceeeec-CCeEEEEEEEEEeeeCCCCCCcccCeEEe
Q 026592            2 YENVEKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYG-GSKYLGVKKALVFYKGRPPKGIKTDWIMH   80 (236)
Q Consensus         2 WdLP~~~~~ge~eWYFFspr~rk~~~G~R~nR~t~~GyWKatG~~k~I~~-~~~~VG~KktLvFy~Gr~p~g~kT~WiMh   80 (236)
                      |+||+....++++||||+++++++++|.|++|++++|+||++|++++|.+ ++.+||+|++|+||.++.+++.+|+|+||
T Consensus        45 ~~L~~~~~~~~~~~yFF~~~~~~~~~~~r~~R~~~~G~Wk~~g~~~~i~~~~g~~iG~k~~l~f~~~~~~~~~kt~W~M~  124 (129)
T PF02365_consen   45 WELPAKFKGGDEEWYFFSPRKKKYPNGGRPNRVTGGGYWKSTGKEKPIKDPGGKVIGFKKTLVFYSGKSPNGKKTGWVMH  124 (129)
T ss_dssp             GGCHHHSSS-SSEEEEEEE----------S-EEETTEEEEEECEEEEEEE-TTCEEEEEEEEEEEESSTTS-EEEEEEEE
T ss_pred             HHhhhhccCCCceEEEEEecccccCCcccccccccceEEeecccccccccccceeeeeEEEEEEEeccCCCCCcCCeEEE
Confidence            89995433467799999999999999999999999999999999999998 88999999999999998899999999999


Q ss_pred             EEEeC
Q 026592           81 EYRLN   85 (236)
Q Consensus        81 EY~l~   85 (236)
                      ||+|.
T Consensus       125 EY~L~  129 (129)
T PF02365_consen  125 EYSLE  129 (129)
T ss_dssp             EEEE-
T ss_pred             EEEeC
Confidence            99984

NAC proteins are involved in developmental processes, including formation of the shoot apical meristem, floral organs and lateral shoots, as well as in plant hormonal control and defence. The NAC domain is accompanied by diverse C-terminal transcriptional activation domains. The NAC domain has been shown to be a DNA-binding domain (DBD) and a dimerization domain [,]. The NAC domain can be subdivided into five subdomains (A-E). Each subdomain is distinguishable by blocks of heterogeneous amino acids or gaps. While the NAC domains were rich in basic amino acids (R, K and H) as a whole, the distribution of positive and negative amino acids in each subdomain were unequal. Subdomains C and D are rich in basic amino acids but poor in acidic amino acids, while subdomain B contains a high proportion of acidic amino acids. Putative nuclear localization signals (NLS) have been detected in subdomains C and D []. The DBD is contained within a 60 amino acid region located within subdomains D and E []. The overall structure of the NAC domain monomer consists of a very twisted antiparallel beta-sheet, which packs against an N-terminal alpha-helix on one side and one shorter helix on the other side surrounded by a few helical elements. The structure suggests that the NAC domain mediates dimerization through conserved interactions including a salt bridge, and DNA binding through the NAC dimer face rich in positive charges [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1UT4_A 3SWM_B 4DUL_B 3SWP_D 1UT7_B 3ULX_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	236
3swm_A	174	The Nac Domain Of Anac019 In Complex With Dna, Gold		4e-41
1ut4_A	171	Structure Of The Conserved Domain Of Anac, A Member		4e-41
3ulx_A	174	Crystal Structural Of The Conserved Domain Of Rice		3e-35

>pdb|3SWM|A Chain A, The Nac Domain Of Anac019 In Complex With Dna, Gold Derivative Length = 174

Iteration: 1
 Score =  164 bits (415), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 77/111 (69%), Positives = 89/111 (80%), Gaps = 4/111 (3%)
Query: 7   KAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYK 66
           KA FGEKEWYFFSPRDRKYPNG+RPNR   SGYWKATGTDK I    + +G+KKALVFY 
Sbjct: 68  KALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYI 127
Query: 67  GRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSR 117
           G+ PKG KT+WIMHEYRL +P+R+    NGS KLDDWVLCRIYKK+ +  +
Sbjct: 128 GKAPKGTKTNWIMHEYRLIEPSRR----NGSTKLDDWVLCRIYKKQSSAQK 174

>pdb|1UT4|A Chain A, Structure Of The Conserved Domain Of Anac, A Member Of The Nac Family Of Transcription Factors Length = 171

Iteration: 1
 Score =  164 bits (415), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 77/111 (69%), Positives = 89/111 (80%), Gaps = 4/111 (3%)
Query: 7   KAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYK 66
           KA FGEKEWYFFSPRDRKYPNG+RPNR   SGYWKATGTDK I    + +G+KKALVFY 
Sbjct: 65  KALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYI 124
Query: 67  GRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSR 117
           G+ PKG KT+WIMHEYRL +P+R+    NGS KLDDWVLCRIYKK+ +  +
Sbjct: 125 GKAPKGTKTNWIMHEYRLIEPSRR----NGSTKLDDWVLCRIYKKQSSAQK 171

>pdb|3ULX|A Chain A, Crystal Structural Of The Conserved Domain Of Rice Stress-Responsive Nac1 Length = 174

Iteration: 1
 Score =  145 bits (365), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 67/108 (62%), Positives = 83/108 (76%), Gaps = 1/108 (0%)
Query: 6   EKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFY 65
           E+A FG +EWYFF+PRDRKYPNG+RPNRA  +GYWKATG DK +    + LG+KKALVFY
Sbjct: 62  ERALFGAREWYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAPRGRTLGIKKALVFY 121
Query: 66  KGRPPKGIKTDWIMHEYRL-NDPTRQPYKHNGSMKLDDWVLCRIYKKR 112
            G+ P+G+KTDWIMHEYRL +          GS++LDDWVLCR+Y K+
Sbjct: 122 AGKAPRGVKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNKK 169

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	236
1ut7_A	171	No apical meristem protein; transcription regulati	1e-68
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	3e-68

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A Length = 171

 Score =  207 bits (530), Expect = 1e-68
 Identities = 77/112 (68%), Positives = 88/112 (78%), Gaps = 4/112 (3%)

Query: 6   EKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFY 65
            KA FGEKEWYFFSPRDRKYPNG+RPNR   SGYWKATGTDK I    + +G+KKALVFY
Sbjct: 64  NKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFY 123

Query: 66  KGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSR 117
            G+ PKG KT+WIMHEYRL +P+R     NGS KLDDWVLCRIYKK+ +  +
Sbjct: 124 IGKAPKGTKTNWIMHEYRLIEPSR----RNGSTKLDDWVLCRIYKKQSSAQK 171

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} Length = 174

 Score =  206 bits (527), Expect = 3e-68
 Identities = 69/113 (61%), Positives = 85/113 (75%), Gaps = 1/113 (0%)

Query: 6   EKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFY 65
           E+A FG +EWYFF+PRDRKYPNG+RPNRA  +GYWKATG DK +    + LG+KKALVFY
Sbjct: 62  ERALFGAREWYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAPRGRTLGIKKALVFY 121

Query: 66  KGRPPKGIKTDWIMHEYRLNDPTRQPY-KHNGSMKLDDWVLCRIYKKRQTGSR 117
            G+ P+G+KTDWIMHEYRL D  R       GS++LDDWVLCR+Y K+    +
Sbjct: 122 AGKAPRGVKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNKKNEWEK 174

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	236
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	100.0
1ut7_A	171	No apical meristem protein; transcription regulati	100.0

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} SCOP: b.143.1.1

Probab=100.00  E-value=4.9e-41  Score=284.55  Aligned_cols=113  Identities=61%  Similarity=1.220  Sum_probs=93.4

Q ss_pred             CCCCCcCCCCCceEEEEeecCCCCCCCCCCccccCCcEEEEcccceeeecCCeEEEEEEEEEeeeCCCCCCcccCeEEeE
Q 026592            2 YENVEKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIKTDWIMHE   81 (236)
Q Consensus         2 WdLP~~~~~ge~eWYFFspr~rk~~~G~R~nR~t~~GyWKatG~~k~I~~~~~~VG~KktLvFy~Gr~p~g~kT~WiMhE   81 (236)
                      ||||+.+..++++|||||+|++||++|.|+||+|++||||+||++++|.+++.+||+||+||||.|++|+|.||+|+|||
T Consensus        58 w~Lp~~~~~g~~ewYFFs~r~~ky~~g~R~nR~t~~G~WkatG~dk~I~~~g~~vG~KktLvFy~g~~p~g~kT~WvMhE  137 (174)
T 3ulx_A           58 WDLPERALFGAREWYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAPRGRTLGIKKALVFYAGKAPRGVKTDWIMHE  137 (174)
T ss_dssp             GGSGGGCSSCSSEEEEEEECCC-----CCSCEEETTEEEEECSCCEEECCSSSCCEEEEEEEEEESSTTSCEEEEEEEEE
T ss_pred             hhhhhhhccCCceEEEEeccccccCCCCCceeecCCceEccCCCCcEEeeCCcEEEEEEEEEEecCCCCCCCcCCeEEEE
Confidence            99999998899999999999999999999999999999999999999998899999999999999999999999999999


Q ss_pred             EEeCCCCCCCC-CCCCCCCCCceEEEEEEeeCCC
Q 026592           82 YRLNDPTRQPY-KHNGSMKLDDWVLCRIYKKRQT  114 (236)
Q Consensus        82 Y~l~~~~~~~~-~~~g~~~~dd~VLCRIykK~~~  114 (236)
                      |+|......+. ...+++++++|||||||+|++.
T Consensus       138 Y~L~~~~~~~~~~~~~~~~~~~wVlCrvf~K~~~  171 (174)
T 3ulx_A          138 YRLADAGRAAAGAKKGSLRLDDWVLCRLYNKKNE  171 (174)
T ss_dssp             EEECSCC-----------CCSSEEEEEEEESCC-
T ss_pred             EEeCCCCCcccccccCCCCCCCEEEEEEEEcCCC
Confidence            99998754321 1233467799999999999864

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A

Probab=100.00  E-value=4e-40  Score=278.20  Aligned_cols=111  Identities=69%  Similarity=1.245  Sum_probs=89.1

Q ss_pred             CCCCCcCCCCCceEEEEeecCCCCCCCCCCccccCCcEEEEcccceeeecCCeEEEEEEEEEeeeCCCCCCcccCeEEeE
Q 026592            2 YENVEKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIKTDWIMHE   81 (236)
Q Consensus         2 WdLP~~~~~ge~eWYFFspr~rk~~~G~R~nR~t~~GyWKatG~~k~I~~~~~~VG~KktLvFy~Gr~p~g~kT~WiMhE   81 (236)
                      ||||+++..++++|||||+|++||++|.|++|+|++||||+||++++|..++.+||+||+|+||.|++|++.||+|+|||
T Consensus        60 w~Lp~~~~~g~~ewyFFs~r~~k~~~g~R~~R~t~~G~Wk~tG~~k~I~~~~~~vG~KktLvFy~g~~p~g~kT~WvMhE  139 (171)
T 1ut7_A           60 WVLPNKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMHE  139 (171)
T ss_dssp             GGHHHHSSSCSSEEEEEEECCC-------CCEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEESSTTSCEEEEEEEEE
T ss_pred             hHhhchhhcCCccEEEEeccccccCCCCcccccCCCCEEeccCCCceEEecCcEEEEEEEEEEEcCcCCCCCcCCeEEEE
Confidence            99999998899999999999999999999999999999999999999999889999999999999999999999999999


Q ss_pred             EEeCCCCCCCCCCCCCCCCCceEEEEEEeeCCCCC
Q 026592           82 YRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGS  116 (236)
Q Consensus        82 Y~l~~~~~~~~~~~g~~~~dd~VLCRIykK~~~~~  116 (236)
                      |+|.....    ..+.+..++|||||||+|+...+
T Consensus       140 Y~l~~~~~----~~~~~~~~~~VlCrv~~k~~~~~  170 (171)
T 1ut7_A          140 YRLIEPSR----RNGSTKLDDWVLCRIYKKQSSAQ  170 (171)
T ss_dssp             EEECCCC------------CCEEEEEEEECC----
T ss_pred             EEcCCCcc----ccCcccCCCEEEEEEEEcCCCCC
Confidence            99998752    12234568999999999987543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	236
d1ut7a_	166	b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mou	2e-45

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 166

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  147 bits (372), Expect = 2e-45
 Identities = 77/107 (71%), Positives = 87/107 (81%), Gaps = 4/107 (3%)

Query: 6   EKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFY 65
            KA FGEKEWYFFSPRDRKYPNG+RPNR   SGYWKATGTDK I    + +G+KKALVFY
Sbjct: 64  NKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFY 123

Query: 66  KGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKR 112
            G+ PKG KT+WIMHEYRL +P+R+    NGS KLDDWVLCRIYKK+
Sbjct: 124 IGKAPKGTKTNWIMHEYRLIEPSRR----NGSTKLDDWVLCRIYKKQ 166

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	236
d1ut7a_	166	No apical meristem (NAM, ANAC) {Mouse-ear cress (A	100.0

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=4.2e-36  Score=249.59  Aligned_cols=107  Identities=72%  Similarity=1.287  Sum_probs=87.9

Q ss_pred             CCCCCcCCCCCceEEEEeecCCCCCCCCCCccccCCcEEEEcccceeeecCCeEEEEEEEEEeeeCCCCCCcccCeEEeE
Q 026592            2 YENVEKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIKTDWIMHE   81 (236)
Q Consensus         2 WdLP~~~~~ge~eWYFFspr~rk~~~G~R~nR~t~~GyWKatG~~k~I~~~~~~VG~KktLvFy~Gr~p~g~kT~WiMhE   81 (236)
                      |+||+.+..++++|||||++.+++++|.|++|+|++|+||++|++++|.+++.+||+||+|+||.++.+++.+|+|+|||
T Consensus        60 w~Lp~~~~~~~~~wyFft~~~~k~~~g~r~~R~~g~G~Wk~~g~~~~i~~~g~~vG~kk~l~fy~~~~~~~~~t~W~M~E  139 (166)
T d1ut7a_          60 WVLPNKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMHE  139 (166)
T ss_dssp             GGHHHHSSSCSSEEEEEEECCC-------CCEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEESSTTSCEEEEEEEEE
T ss_pred             hhccchhccCcceEEEEeeeccccCCCCccccccCCCEecccCCCceEecCCcEEEEEEEEEEEecCCCCCCccCeEEEE
Confidence            99999888889999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEeCCCCCCCCCCCCCCCCCceEEEEEEeeC
Q 026592           82 YRLNDPTRQPYKHNGSMKLDDWVLCRIYKKR  112 (236)
Q Consensus        82 Y~l~~~~~~~~~~~g~~~~dd~VLCRIykK~  112 (236)
                      |+|.+....    .++.+.++|||||||+|+
T Consensus       140 Y~l~~~~~~----~~~~~~~~~VLCrI~~Kk  166 (166)
T d1ut7a_         140 YRLIEPSRR----NGSTKLDDWVLCRIYKKQ  166 (166)
T ss_dssp             EEECCCC------------CCEEEEEEEECC
T ss_pred             EecCCcccc----cCccccCCEEEEEEEecC
Confidence            999886542    233457899999999985