Citrus Sinensis ID: 026602


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230------
MFQLLFAFSQVMGSLFCCFAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQGEPKVYPTMRSAFVDIISTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWTMDWNRIRSSNTSSTGADNNLSSFQLFVCGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPKYGARVEHRAYRNMSDALSRIVQAEGWAGLYKGIVPSTVKAAPAGAVTFVAYEYASDWLESILT
ccHHHHHHHHHHHHHHcHHccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHccccccccccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHccccccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHc
cHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHccccccccHHHHHHHHHHHHcccHHHHcccHHHHHHHcHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHcccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
MFQLLFAFSQVMGSLFCCFAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILasqgepkvyptMRSAFVDIISTrgfrglyaglspTLVEIipyaglqfgtydtFKRWTmdwnrirssntsstgadnnlssFQLFVCGLAAGTCAKLVCHPLDVVKKRFqieglqrhpkygarvEHRAYRNMSDALSRIVQAEGWaglykgivpstvkaapagaVTFVAYEYASDWLESILT
MFQLLFAFSQVMGSLFCCFAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASqgepkvypTMRSAFVDIISTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWTMDWNRIRSSntsstgadnnLSSFQLFVCGLAAGTCAKLVCHPLDVVKKRfqieglqrhpkygarveHRAYRNMSDALSRIVQAEGWAGLYKGIVPSTVKAAPAGAVTFVAYEYASDWLESILT
MFQLLFAFSQVMGSLFCCFAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQGEPKVYPTMRSAFVDIISTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWTMDWNRIRSSNTSSTGADNNLSSFQLFVCGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPKYGARVEHRAYRNMSDALSRIVQAEGWAGLYKGIVPSTVKAAPAGAVTFVAYEYASDWLESILT
**QLLFAFSQVMGSLFCCFAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQGEPKVYPTMRSAFVDIISTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWTMDWNRIR***********NLSSFQLFVCGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPKYGARVEHRAYRNMSDALSRIVQAEGWAGLYKGIVPSTVKAAPAGAVTFVAYEYASDWLES***
MFQLLFAFSQVMGSLF***********AYLSYVSGALAGCAATVGSYPFDLLRTILASQGEPKVYPTMRSAFVDIISTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWTMDWNRI*************LSSFQLFVCGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPKY**RVEHRAYRNMSDALSRIVQAEGWAGLYKGIVPSTVKAAPAGAVTFVAYEYASDWLESILT
MFQLLFAFSQVMGSLFCCFAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQGEPKVYPTMRSAFVDIISTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWTMDWNRIRSSNTSSTGADNNLSSFQLFVCGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPKYGARVEHRAYRNMSDALSRIVQAEGWAGLYKGIVPSTVKAAPAGAVTFVAYEYASDWLESILT
MFQLLFAFSQVMGSLFCCFAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQGEPKVYPTMRSAFVDIISTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWTMDWNRI***********NNLSSFQLFVCGLAAGTCAKLVCHPLDVVKKRFQIEGLQRH********HRAYRNMSDALSRIVQAEGWAGLYKGIVPSTVKAAPAGAVTFVAYEYASDWLESILT
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooo
oooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooo
ooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooo
SSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MFQLLFAFSQVMGSLFCCFAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQGEPKVYPTMRSAFVDIISTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWTMDWNRIRSSNTSSTGADNNLSSFQLFVCGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPKYGARVEHRAYRNMSDALSRIVQAEGWAGLYKGIVPSTVKAAPAGAVTFVAYEYASDWLESILT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query236 2.2.26 [Sep-21-2011]
Q5IS35320 Mitochondrial thiamine py N/A no 0.775 0.571 0.38 1e-31
Q9HC21320 Mitochondrial thiamine py yes no 0.775 0.571 0.375 1e-31
Q29RM1318 Mitochondrial thiamine py yes no 0.783 0.581 0.372 3e-31
Q9DAM5318 Mitochondrial thiamine py no no 0.813 0.603 0.374 8e-31
Q5NVC1320 Mitochondrial thiamine py yes no 0.775 0.571 0.37 5e-30
O04619352 Mitochondrial adenine nuc no no 0.932 0.625 0.305 6e-28
A6SL61322 Mitochondrial thiamine py N/A no 0.796 0.583 0.341 1e-25
A7ER02322 Mitochondrial thiamine py N/A no 0.783 0.574 0.342 1e-25
Q1E7P0319 Mitochondrial thiamine py N/A no 0.783 0.579 0.347 3e-25
A4RF23327 Mitochondrial thiamine py N/A no 0.796 0.574 0.334 4e-25
>sp|Q5IS35|TPC_MACFA Mitochondrial thiamine pyrophosphate carrier OS=Macaca fascicularis GN=SLC25A19 PE=2 SV=1 Back     alignment and function desciption
 Score =  136 bits (343), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 76/200 (38%), Positives = 111/200 (55%), Gaps = 17/200 (8%)

Query: 30  LSYVSGALAGCAATVGSYPFDLLRTILASQGEPKVYPTMRSAFVDIISTRGFRGLYAGLS 89
           + +V G LA C AT+  +P D+LRT  A+QGEPKVY T+R A   +  + G +  Y GL+
Sbjct: 120 VHFVCGGLAACTATLTVHPVDVLRTRFAAQGEPKVYNTLRHAVGTMYRSEGPQVFYKGLA 179

Query: 90  PTLVEIIPYAGLQFGTYDTFK---RWTMDWNRIRSSNTSSTGADNNLSSFQLFVCGLAAG 146
           PTL+ I PYAGLQF  Y + K   +W M     ++ N             Q  +CG  AG
Sbjct: 180 PTLIAIFPYAGLQFSCYSSLKHLYKWAMPAEGKKNEN------------LQNLLCGSGAG 227

Query: 147 TCAKLVCHPLDVVKKRFQIEGLQRHPKYGARVEHRAYRNMSDALSRIVQAEGWAGLYKGI 206
             +K + +PLD+ KKR Q+ G + H +  A  + R Y+ + D   +++Q EG  G +KG+
Sbjct: 228 VISKTLTYPLDLFKKRLQVGGFE-HAR-AAFGQVRRYKGLMDCAKQVLQKEGALGFFKGL 285

Query: 207 VPSTVKAAPAGAVTFVAYEY 226
            PS +KAA +    F  YE+
Sbjct: 286 SPSLLKAALSTGFMFFWYEF 305




Mitochondrial transporter mediating uptake of thiamine pyrophosphate (ThPP) into mitochondria.
Macaca fascicularis (taxid: 9541)
>sp|Q9HC21|TPC_HUMAN Mitochondrial thiamine pyrophosphate carrier OS=Homo sapiens GN=SLC25A19 PE=1 SV=1 Back     alignment and function description
>sp|Q29RM1|TPC_BOVIN Mitochondrial thiamine pyrophosphate carrier OS=Bos taurus GN=SLC25A19 PE=2 SV=1 Back     alignment and function description
>sp|Q9DAM5|TPC_MOUSE Mitochondrial thiamine pyrophosphate carrier OS=Mus musculus GN=Slc25a19 PE=2 SV=1 Back     alignment and function description
>sp|Q5NVC1|TPC_PONAB Mitochondrial thiamine pyrophosphate carrier OS=Pongo abelii GN=SLC25A19 PE=2 SV=1 Back     alignment and function description
>sp|O04619|ADNT1_ARATH Mitochondrial adenine nucleotide transporter ADNT1 OS=Arabidopsis thaliana GN=ADNT1 PE=2 SV=1 Back     alignment and function description
>sp|A6SL61|TPC1_BOTFB Mitochondrial thiamine pyrophosphate carrier 1 OS=Botryotinia fuckeliana (strain B05.10) GN=tpc1 PE=3 SV=1 Back     alignment and function description
>sp|A7ER02|TPC1_SCLS1 Mitochondrial thiamine pyrophosphate carrier 1 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=tpc1 PE=3 SV=1 Back     alignment and function description
>sp|Q1E7P0|TPC1_COCIM Mitochondrial thiamine pyrophosphate carrier 1 OS=Coccidioides immitis (strain RS) GN=TPC1 PE=3 SV=1 Back     alignment and function description
>sp|A4RF23|TPC1_MAGO7 Mitochondrial thiamine pyrophosphate carrier 1 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=TPC1 PE=3 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query236
224107339 339 predicted protein [Populus trichocarpa] 0.775 0.539 0.888 1e-108
224123216329 predicted protein [Populus trichocarpa] 0.766 0.550 0.873 1e-108
255551717331 Mitochondrial deoxynucleotide carrier, p 0.762 0.543 0.889 1e-107
356521873331 PREDICTED: mitochondrial thiamine pyroph 0.885 0.631 0.863 1e-106
356529708328 PREDICTED: mitochondrial thiamine pyroph 0.898 0.646 0.847 1e-105
356556120328 PREDICTED: mitochondrial thiamine pyroph 0.898 0.646 0.842 1e-104
363814342327 uncharacterized protein LOC100805353 [Gl 0.889 0.642 0.850 1e-103
15239754 339 Mitochondrial substrate carrier family p 0.766 0.533 0.817 1e-101
225432282330 PREDICTED: mitochondrial thiamine pyroph 0.915 0.654 0.815 1e-101
297795621 338 mitochondrial substrate carrier family p 0.754 0.526 0.813 1e-101
>gi|224107339|ref|XP_002314452.1| predicted protein [Populus trichocarpa] gi|222863492|gb|EEF00623.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 192/216 (88%), Positives = 201/216 (93%)

Query: 21  ENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQGEPKVYPTMRSAFVDIISTRG 80
           E+HI LS YLSY SGALAGCAATVGSYPFDLLRTILASQGEPKVYPTMRSAFVDI+ TRG
Sbjct: 124 EDHIQLSPYLSYASGALAGCAATVGSYPFDLLRTILASQGEPKVYPTMRSAFVDIVRTRG 183

Query: 81  FRGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWTMDWNRIRSSNTSSTGADNNLSSFQLFV 140
           FRGLYAGLSPTLVEI+PYAGLQFGTYDTFKRWTM WN  +SS+TSS   D+NLSSFQLF+
Sbjct: 184 FRGLYAGLSPTLVEIVPYAGLQFGTYDTFKRWTMAWNHHKSSSTSSISTDDNLSSFQLFI 243

Query: 141 CGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPKYGARVEHRAYRNMSDALSRIVQAEGWA 200
           CGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPKYG RVEHRAYRNM DAL RI+Q EGWA
Sbjct: 244 CGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPKYGGRVEHRAYRNMFDALRRILQTEGWA 303

Query: 201 GLYKGIVPSTVKAAPAGAVTFVAYEYASDWLESILT 236
           GLYKGIVPSTVKAAPAGAVTFVAYE+ SDWLESILT
Sbjct: 304 GLYKGIVPSTVKAAPAGAVTFVAYEFTSDWLESILT 339




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224123216|ref|XP_002330367.1| predicted protein [Populus trichocarpa] gi|222871571|gb|EEF08702.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255551717|ref|XP_002516904.1| Mitochondrial deoxynucleotide carrier, putative [Ricinus communis] gi|223543992|gb|EEF45518.1| Mitochondrial deoxynucleotide carrier, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356521873|ref|XP_003529575.1| PREDICTED: mitochondrial thiamine pyrophosphate carrier-like [Glycine max] Back     alignment and taxonomy information
>gi|356529708|ref|XP_003533430.1| PREDICTED: mitochondrial thiamine pyrophosphate carrier-like [Glycine max] Back     alignment and taxonomy information
>gi|356556120|ref|XP_003546375.1| PREDICTED: mitochondrial thiamine pyrophosphate carrier-like [Glycine max] Back     alignment and taxonomy information
>gi|363814342|ref|NP_001242812.1| uncharacterized protein LOC100805353 [Glycine max] gi|255637169|gb|ACU18915.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|15239754|ref|NP_199708.1| Mitochondrial substrate carrier family protein [Arabidopsis thaliana] gi|10177187|dbj|BAB10321.1| mitochondrial carrier protein-like [Arabidopsis thaliana] gi|26449838|dbj|BAC42042.1| putative mitochondrial carrier protein [Arabidopsis thaliana] gi|30017309|gb|AAP12888.1| At5g48970 [Arabidopsis thaliana] gi|332008368|gb|AED95751.1| Mitochondrial substrate carrier family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|225432282|ref|XP_002272682.1| PREDICTED: mitochondrial thiamine pyrophosphate carrier [Vitis vinifera] gi|297736865|emb|CBI26066.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|297795621|ref|XP_002865695.1| mitochondrial substrate carrier family protein [Arabidopsis lyrata subsp. lyrata] gi|297311530|gb|EFH41954.1| mitochondrial substrate carrier family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query236
TAIR|locus:2154374339 AT5G48970 [Arabidopsis thalian 0.906 0.631 0.817 2.7e-93
TAIR|locus:2089453335 AT3G21390 "AT3G21390" [Arabido 0.919 0.647 0.788 6.3e-92
UNIPROTKB|E1C309309 SLC25A19 "Uncharacterized prot 0.796 0.608 0.376 4.2e-31
UNIPROTKB|Q29RM1318 SLC25A19 "Mitochondrial thiami 0.771 0.572 0.379 6.9e-31
UNIPROTKB|Q9HC21320 SLC25A19 "Mitochondrial thiami 0.779 0.575 0.389 1.1e-30
RGD|1359554318 Slc25a19 "solute carrier famil 0.868 0.644 0.377 1.8e-30
MGI|MGI:1914533318 Slc25a19 "solute carrier famil 0.868 0.644 0.372 3.8e-30
UNIPROTKB|E2RFK6318 SLC25A19 "Uncharacterized prot 0.775 0.575 0.396 4.9e-30
UNIPROTKB|C8C419318 SLC25A19 "Solute carrier famil 0.771 0.572 0.379 1e-29
UNIPROTKB|Q6I583355 OSJNBa0009C07.13 "Putative per 0.911 0.605 0.336 2.7e-29
TAIR|locus:2154374 AT5G48970 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 929 (332.1 bits), Expect = 2.7e-93, P = 2.7e-93
 Identities = 175/214 (81%), Positives = 190/214 (88%)

Query:    21 ENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQGEPKVYPTMRSAFVDIISTRG 80
             E+HI+LS YLS+VSGALAGCAAT+GSYPFDLLRTILASQGEPKVYPTMRSAFVDII +RG
Sbjct:   124 EDHIHLSPYLSFVSGALAGCAATLGSYPFDLLRTILASQGEPKVYPTMRSAFVDIIQSRG 183

Query:    81 FRGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWTMDWNRIRSSNTSSTGADNNLSSFQLFV 140
              RGLY GL+PTLVEI+PYAGLQFGTYD FKRW MDWNR + S+      D NLSSFQLF+
Sbjct:   184 IRGLYNGLTPTLVEIVPYAGLQFGTYDMFKRWMMDWNRYKLSSKIPINVDTNLSSFQLFI 243

Query:   141 CGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPKYGARVEHRAYRNMSDALSRIVQAEGWA 200
             CGL AGT AKLVCHPLDVVKKRFQIEGLQRHP+YGARVE RAYRNM D L +I+ +EGW 
Sbjct:   244 CGLGAGTSAKLVCHPLDVVKKRFQIEGLQRHPRYGARVERRAYRNMLDGLRQIMISEGWH 303

Query:   201 GLYKGIVPSTVKAAPAGAVTFVAYEYASDWLESI 234
             GLYKGIVPSTVKAAPAGAVTFVAYE+ SDWLESI
Sbjct:   304 GLYKGIVPSTVKAAPAGAVTFVAYEFTSDWLESI 337


GO:0005739 "mitochondrion" evidence=ISM;IDA
GO:0005743 "mitochondrial inner membrane" evidence=ISS
GO:0006810 "transport" evidence=ISS
GO:0006839 "mitochondrial transport" evidence=ISS
GO:0030974 "thiamine pyrophosphate transport" evidence=IGI
GO:0090422 "thiamine pyrophosphate transporter activity" evidence=IGI
TAIR|locus:2089453 AT3G21390 "AT3G21390" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|E1C309 SLC25A19 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|Q29RM1 SLC25A19 "Mitochondrial thiamine pyrophosphate carrier" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q9HC21 SLC25A19 "Mitochondrial thiamine pyrophosphate carrier" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|1359554 Slc25a19 "solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:1914533 Slc25a19 "solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|E2RFK6 SLC25A19 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|C8C419 SLC25A19 "Solute carrier family 25 member 19" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q6I583 OSJNBa0009C07.13 "Putative peroxisomal Ca-dependent solute carrier" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query236
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 5e-24
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 4e-22
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 1e-14
PTZ00168259 PTZ00168, PTZ00168, mitochondrial carrier protein; 5e-04
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
 Score = 91.5 bits (228), Expect = 5e-24
 Identities = 36/101 (35%), Positives = 49/101 (48%), Gaps = 9/101 (8%)

Query: 131 NNLSSFQLFVCGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPKYGARVEHRAYRNMSDAL 190
           + LS     + G  AG  A  V +PLDVVK R Q           A    R Y+ + D  
Sbjct: 1   SPLSFLASLLAGGIAGAIAATVTYPLDVVKTRLQS---------SAAGGSRKYKGILDCF 51

Query: 191 SRIVQAEGWAGLYKGIVPSTVKAAPAGAVTFVAYEYASDWL 231
            +I + EG  GLYKG++P+ ++ APA A+ F  YE     L
Sbjct: 52  KKIYKEEGIRGLYKGLLPNLLRVAPAAAIYFGTYETLKKLL 92


Length = 96

>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 236
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0764 299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0752 320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0760 302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0757 319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
KOG0762 311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 99.97
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 99.97
KOG0765333 consensus Predicted mitochondrial carrier protein 99.97
KOG0770353 consensus Predicted mitochondrial carrier protein 99.97
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.97
KOG0770 353 consensus Predicted mitochondrial carrier protein 99.97
KOG0761 361 consensus Mitochondrial carrier protein CGI-69 [En 99.97
KOG0036463 consensus Predicted mitochondrial carrier protein 99.97
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.97
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 99.97
KOG0751 694 consensus Mitochondrial aspartate/glutamate carrie 99.97
KOG0766297 consensus Predicted mitochondrial carrier protein 99.96
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.96
KOG0767 333 consensus Mitochondrial phosphate carrier protein 99.96
KOG0036463 consensus Predicted mitochondrial carrier protein 99.96
KOG0769 308 consensus Predicted mitochondrial carrier protein 99.96
KOG0766 297 consensus Predicted mitochondrial carrier protein 99.95
KOG0765333 consensus Predicted mitochondrial carrier protein 99.95
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 99.95
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.95
KOG0768 323 consensus Mitochondrial carrier protein PET8 [Ener 99.95
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.93
KOG0769308 consensus Predicted mitochondrial carrier protein 99.93
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 99.93
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.92
KOG0767333 consensus Mitochondrial phosphate carrier protein 99.92
KOG1519297 consensus Predicted mitochondrial carrier protein 99.8
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.78
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.76
KOG2745321 consensus Mitochondrial carrier protein [General f 99.71
KOG1519297 consensus Predicted mitochondrial carrier protein 99.68
KOG2954427 consensus Mitochondrial carrier protein [General f 99.67
KOG2745321 consensus Mitochondrial carrier protein [General f 99.61
KOG2954427 consensus Mitochondrial carrier protein [General f 98.73
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
Probab=100.00  E-value=1.1e-42  Score=280.84  Aligned_cols=212  Identities=42%  Similarity=0.712  Sum_probs=186.1

Q ss_pred             hhHHHHHHHhhhhcccCCCcCChhhHHHHHHHHHHHHHHHHhccchhHHHHHHHhcCCCCCCCcHHHHHHHHHhhccccc
Q 026602            4 LLFAFSQVMGSLFCCFAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQGEPKVYPTMRSAFVDIISTRGFRG   83 (236)
Q Consensus         4 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~i~~Ple~ik~~~Q~~~~~~~~~~~~~~~~~i~~~~G~~~   83 (236)
                      +.|..||.+|+......++. ..++..+++||++||+++.++++|+|++|+|+-++.+...|+++.+++++|+++||++|
T Consensus       103 vqf~aye~~k~~~~~~~~~~-~~~~~~~l~aGalAG~~a~~~tyPLDlvRtRLa~q~~~~~y~~l~~a~~~I~~~eGi~g  181 (320)
T KOG0752|consen  103 VQFSAYEQYKKLVLGVDPNG-SLSPLVRLVAGALAGMTATLATYPLDLLRTRLAVQGELKVYRGLLHAFKTIYREEGIRG  181 (320)
T ss_pred             hhhhHHHHhhhhhhccCccc-ccchhHHHHHHHHHHHHHHHhcCcHHHhhhheeeecccccCCcHHHHHHHHHHhcchhh
Confidence            67999999998643333332 67889999999999999999999999999999999887789999999999999999999


Q ss_pred             cccchhhhHHhHhhhhhhHHHHHHHHHHH-hhhhhhhcccCCCCCCCCCCCchHHHHHHHhhHhhhhhhhcccHHHHHHH
Q 026602           84 LYAGLSPTLVEIIPYAGLQFGTYDTFKRW-TMDWNRIRSSNTSSTGADNNLSSFQLFVCGLAAGTCAKLVCHPLDVVKKR  162 (236)
Q Consensus        84 ly~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ag~~~~~v~~P~d~ik~r  162 (236)
                      ||||+.|++++.+|+.++.|.+||.++++ +....           .....+.+..+++|++||++++.++||+|+||.|
T Consensus       182 fYrGl~ptllgi~Pyag~~F~~Yd~lk~~~~~~~~-----------~~~~~~~~~~l~~GalAG~~aqti~yPlD~vRrr  250 (320)
T KOG0752|consen  182 FYRGLGPTLLGIAPYAGINFFAYDTLKKWQYLKSS-----------GNKELSNFERLLCGALAGAVAQTITYPLDTVRRR  250 (320)
T ss_pred             hhcCcchhhheehhhhhhHHHHHHHHHHhhccccc-----------ccchhhhHHHHHHHHHHHHHHhhhcccHHHHHHH
Confidence            99999999999999999999999999995 32220           1245677889999999999999999999999999


Q ss_pred             HHhccccCCCCCCccccccccCCHHHHHHHHHHhhcccccccchhhhhhhhcccchhhHHHHHHHHHHHHh
Q 026602          163 FQIEGLQRHPKYGARVEHRAYRNMSDALSRIVQAEGWAGLYKGIVPSTVKAAPAGAVTFVAYEYASDWLES  233 (236)
Q Consensus       163 ~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~~~~i~~~~y~~l~~~l~~  233 (236)
                      ||+.......      ...+++++++|+++|+++||+.|||||+.|++++.+|..++.|.+||.+|+++..
T Consensus       251 mQ~~~~~~~~------~~~~~~~~~~~~~~i~~~EG~~gLYkGl~p~~lK~~P~~ai~F~~Ye~~k~~l~~  315 (320)
T KOG0752|consen  251 MQLGGLKYFG------GGFRYKGVLDAFRQIVKTEGVKGLYKGLSPNLLKVVPSVAISFTTYEILKDLLRL  315 (320)
T ss_pred             HhccCccccc------cccccccHHHHHHHHHHHhhhhhhhccccHHHHHhcccceeeeehHHHHHHHhhc
Confidence            9999854111      2334589999999999999999999999999999999999999999999988754



>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query236
2lck_A 303 Structure Of The Mitochondrial Uncoupling Protein 2 1e-11
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 2e-09
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure

Iteration: 1

Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 54/211 (25%), Positives = 87/211 (41%), Gaps = 30/211 (14%) Query: 30 LSYVSGALAGCAATVGSYPFDLLRTILASQGEPK---------VYPTMRSAFVDIISTRG 80 + ++ A C A + ++P D + L QGE + Y + + ++ T G Sbjct: 3 VKFLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEG 62 Query: 81 FRGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWTMDWNRIRSSNTSSTGADNNLSSFQLFV 140 R LY GL L + +A ++ G YD+ K++ + S + G+ + Sbjct: 63 PRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFY-----TKGSEHAGIGSR--------LL 109 Query: 141 CGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPKYGARVEHRAYRNMSDALSRIVQAEGWA 200 G G A V P DVVK RFQ + + G R Y++ +A I + EG Sbjct: 110 AGSTTGALAVAVAQPTDVVKVRFQAQA-----RAGG---GRRYQSTVEAYKTIAREEGIR 161 Query: 201 GLYKGIVPSTVKAAPAGAVTFVAYEYASDWL 231 GL+KG P+ + A V Y+ D L Sbjct: 162 GLWKGTSPNVARNAIVNCAELVTYDLIKDTL 192
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query236
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 3e-60
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 1e-34
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 4e-18
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 5e-43
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 7e-35
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 6e-10
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
 Score =  190 bits (485), Expect = 3e-60
 Identities = 53/232 (22%), Positives = 84/232 (36%), Gaps = 28/232 (12%)

Query: 6   FAFSQVMGSLFCCFAENH--INLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQ---- 59
           FAF      +F    + H         +  SG  AG  +    YP D  RT LA+     
Sbjct: 88  FAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKG 147

Query: 60  GEPKVYPTMRSAFVDIISTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWTMDWNRI 119
              + +  + +    I  + G RGLY G + ++  II Y    FG YDT K    D    
Sbjct: 148 AAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPD---- 203

Query: 120 RSSNTSSTGADNNLSSFQLFVCGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPKYGARVE 179
                       N+     ++        A LV +P D V++R  ++        G +  
Sbjct: 204 ----------PKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQS-------GRKGA 246

Query: 180 HRAYRNMSDALSRIVQAEGWAGLYKGIVPSTVKAAPAGAVTFVAYEYASDWL 231
              Y    D   +I + EG    +KG   + ++    GA   V Y+    ++
Sbjct: 247 DIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMG-GAFVLVLYDEIKKFV 297


>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query236
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 100.0
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
Probab=100.00  E-value=4.8e-42  Score=283.21  Aligned_cols=204  Identities=23%  Similarity=0.346  Sum_probs=182.1

Q ss_pred             hhhHHHHHHHhhhhcccCCCcCChhhHHHHHHHHHHHHHHHHhccchhHHHHHHHhcCC---CCCCCcHHHHHHHHHhhc
Q 026602            3 QLLFAFSQVMGSLFCCFAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQGE---PKVYPTMRSAFVDIISTR   79 (236)
Q Consensus         3 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~i~~Ple~ik~~~Q~~~~---~~~~~~~~~~~~~i~~~~   79 (236)
                      .++|++||.+|+.+....+   ..+....+++|++||+++.++++|+|++|+|+|++..   ...|++.++++++++++|
T Consensus        82 ~i~f~~ye~~k~~~~~~~~---~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~~i~~~e  158 (303)
T 2lck_A           82 SVRIGLYDSVKQFYTKGSE---HAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREE  158 (303)
T ss_dssp             HHTTTHHHHHHHHHSCCCS---SCCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCSCCCSSSCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCc---CCcHHHHHHHHHHHHHHHHHHcCcHHHHHHHHhcccccCCCCCCCCHHHHHHHHHHhc
Confidence            5899999999999865422   3567889999999999999999999999999999863   357899999999999999


Q ss_pred             cccccccchhhhHHhHhhhhhhHHHHHHHHHHHhhhhhhhcccCCCCCCCCCCCchHHHHHHHhhHhhhhhhhcccHHHH
Q 026602           80 GFRGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWTMDWNRIRSSNTSSTGADNNLSSFQLFVCGLAAGTCAKLVCHPLDVV  159 (236)
Q Consensus        80 G~~~ly~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ag~~~~~v~~P~d~i  159 (236)
                      |++|||+|+.+.+++.++..+++|.+||.+++.+.+..            .........+++|++||++++++++|+|+|
T Consensus       159 G~~glyrG~~~~l~~~~~~~~i~f~~ye~~k~~l~~~~------------~~~~~~~~~~~~g~~ag~~~~~~~~P~dvv  226 (303)
T 2lck_A          159 GIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKAN------------LMTDDLPCHFTSAFGAGFCTTVIASPVDVV  226 (303)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTT------------SCCSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ChhhhhCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcc------------CCCCchHHHHHHHHHHHHHHHHHcCHHHHH
Confidence            99999999999999999999999999999999876541            123456678999999999999999999999


Q ss_pred             HHHHHhccccCCCCCCccccccccCCHHHHHHHHHHhhcccccccchhhhhhhhcccchhhHHHHHHHHHHHHh
Q 026602          160 KKRFQIEGLQRHPKYGARVEHRAYRNMSDALSRIVQAEGWAGLYKGIVPSTVKAAPAGAVTFVAYEYASDWLES  233 (236)
Q Consensus       160 k~r~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~~~~i~~~~y~~l~~~l~~  233 (236)
                      |+|||.+.            ...|.+.++|+++++++||++|||||+.++++|.+|..+++|.+||.+|+.+.+
T Consensus       227 ktrlq~~~------------~~~y~~~~~~~~~i~~~eG~~glyrG~~~~~~r~~p~~~i~f~~ye~~k~~l~~  288 (303)
T 2lck_A          227 KTRYMNSA------------LGQYHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALMA  288 (303)
T ss_dssp             HHHHTTCC------------SSSCCSHHHHHHHHHHSSCTHHHHSCCHHHHHHHHHHHHHHHHHHHHHHSCCCC
T ss_pred             HHHHHhcc------------ccccCCHHHHHHHHHHHcChHHhhccHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence            99999986            235899999999999999999999999999999999999999999999987654



>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 236
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 6e-18
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 8e-13
d1okca_ 292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 2e-09
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 4e-07
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
 Score = 78.6 bits (192), Expect = 6e-18
 Identities = 47/214 (21%), Positives = 75/214 (35%), Gaps = 26/214 (12%)

Query: 17  CCFAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQGEP----KVYPTMRSAF 72
                         +  SG  AG  +    YP D  RT LA+        + +  + +  
Sbjct: 100 GVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCI 159

Query: 73  VDIISTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWTMDWNRIRSSNTSSTGADNN 132
             I  + G RGLY G + ++  II Y    FG YDT K    D   +    +        
Sbjct: 160 TKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVS-------- 211

Query: 133 LSSFQLFVCGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPKYGARVEHRAYRNMSDALSR 192
                 ++        A LV +P D V++R  ++        G +     Y    D   +
Sbjct: 212 ------WMIAQTVTAVAGLVSYPFDTVRRRMMMQS-------GRKGADIMYTGTVDCWRK 258

Query: 193 IVQAEGWAGLYKGIVPSTVKAAPAGAVTFVAYEY 226
           I + EG    +KG   + ++    GA   V Y+ 
Sbjct: 259 IAKDEGPKAFFKGAWSNVLRGMG-GAFVLVLYDE 291


>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query236
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=100.00  E-value=3.6e-36  Score=244.63  Aligned_cols=203  Identities=26%  Similarity=0.398  Sum_probs=175.2

Q ss_pred             hhhHHHHHHHhhhhcccCCCcC--ChhhHHHHHHHHHHHHHHHHhccchhHHHHHHHhcCC----CCCCCcHHHHHHHHH
Q 026602            3 QLLFAFSQVMGSLFCCFAENHI--NLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQGE----PKVYPTMRSAFVDII   76 (236)
Q Consensus         3 ~~~f~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~a~~~~~~i~~Ple~ik~~~Q~~~~----~~~~~~~~~~~~~i~   76 (236)
                      .++|++||.+++.+.....+..  .......+++|.+|++++.++++|+|++|+|+|++..    +..+.++.+.+++++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~~~~~~~~~~~~~~~~~~~~~~~~  163 (292)
T d1okca_          84 ALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIF  163 (292)
T ss_dssp             HHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHhcccccccccchhhhhhhhhhhhhhhhHHhhhhhhhhhheeeeccccccccccccccHHHHHHHhh
Confidence            5789999999999865543322  3456678899999999999999999999999999854    356789999999999


Q ss_pred             hhccccccccchhhhHHhHhhhhhhHHHHHHHHHHHhhhhhhhcccCCCCCCCCCCCchHHHHHHHhhHhhhhhhhcccH
Q 026602           77 STRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWTMDWNRIRSSNTSSTGADNNLSSFQLFVCGLAAGTCAKLVCHPL  156 (236)
Q Consensus        77 ~~~G~~~ly~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ag~~~~~v~~P~  156 (236)
                      +++|+++||+|+.+.+++.++..+++|..||.+|+.+.+.              ........++++++++++++++++|+
T Consensus       164 ~~~G~~~l~~G~~~~~~~~~~~~~~~~~~~~~~k~~~~~~--------------~~~~~~~~~~~~~~~~~~a~~~t~P~  229 (292)
T d1okca_         164 KSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDP--------------KNVHIIVSWMIAQTVTAVAGLVSYPF  229 (292)
T ss_dssp             HHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGG--------------GCSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hccchhhhhccccccccceehHhhhhhhhccchhhhcccc--------------cccchHHHHHHHHHHHHHHhhccccH
Confidence            9999999999999999999999999999999999876544              23456788899999999999999999


Q ss_pred             HHHHHHHHhccccCCCCCCccccccccCCHHHHHHHHHHhhcccccccchhhhhhhhcccchhhHHHHHHH
Q 026602          157 DVVKKRFQIEGLQRHPKYGARVEHRAYRNMSDALSRIVQAEGWAGLYKGIVPSTVKAAPAGAVTFVAYEYA  227 (236)
Q Consensus       157 d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~~~~i~~~~y~~l  227 (236)
                      |+||+|||.+....       .....|.++++|+++++++||+++||||+.++++|.+| +++.|.+||.+
T Consensus       230 dvvktR~q~~~~~~-------~~~~~y~~~~~~~~~i~~~eG~~~lyrG~~~~~~r~i~-~~i~~~~ye~l  292 (292)
T d1okca_         230 DTVRRRMMMQSGRK-------GADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMG-GAFVLVLYDEI  292 (292)
T ss_dssp             HHHHHHHHTTTTCC-------GGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHHHHH-HHHHHHHHHTC
T ss_pred             HHHHHHHHhcCCCC-------CCCCCCCCHHHHHHHHHHhcCcCcccccHHHHHHHHHH-HHhhhhHhhcC
Confidence            99999999987321       22446899999999999999999999999999999765 68889999963



>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure